LOCUS       DAWITQ010000001        75037 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.001, whole genome shotgun sequence.
ACCESSION   DAWITQ010000001 DAWITQ010000000
VERSION     DAWITQ010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 75037)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 75037)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..75037
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.001"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..95)
                     /locus_tag="WIX18_000001"
     CDS             complement(<1..95)
                     /locus_tag="WIX18_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FrpC operon protein"
                     /protein_id="HEZ5237177.1"
                     /translation="MRPYATTIYQLFILFIGSVFTMTSCEPVNEKT"
     gene            complement(532..807)
                     /locus_tag="WIX18_000002"
     CDS             complement(532..807)
                     /locus_tag="WIX18_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEZ5237178.1"
                     /translation="MNASNWSVYLILCENSAFYCGISPNPQQRLAAHTTGKGAKYTRV
                     FKPVAMRIVAGGMDKGTALRQEIAVKKLTAAQKRQLWEQAEKMPSET"
     gene            complement(804..2087)
                     /locus_tag="WIX18_000003"
     CDS             complement(804..2087)
                     /locus_tag="WIX18_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ5237179.1"
                     /translation="MTASKSGFIGQIFSRNMLVCIFTGFTSGLPLYFLINLIPAWLRS
                     EQVDLKSIGLMALIGLPFTWKFLWSPLMDAVRLPVLGRRRGWMLLTQAGLLAALAAYA
                     FLNPRNHLPLIAGLSVLVAFFSASQDIVLDAFRREILSDEELGLGNSVHVNAYRIAAL
                     IPGSLSLVLADRMPWSEVFVITSLFMLPGLLMTLFLAREPVLPPAVPKTLKQTVVEPF
                     KEFFTRKGIASAVCVLLFIFLYKLGDSMATALATPFYLDMGFSKTDIGLIAKNAGLWP
                     AVAAGILGGVWMLKIGVNKALWLFGAVQAVTVLGFVWLAGFGHFDTVGTGERLMLAAV
                     IGAEAVGVGLGTAAFVSYMARETNPAFTATQLALFTSLSAVPRTVINSFAGYLIEWLG
                     YVPFFQLCFALALPGMLLLLKVAPWNGEKTQDAGR"
     gene            complement(2243..3661)
                     /gene="glnA"
                     /locus_tag="WIX18_000004"
     CDS             complement(2243..3661)
                     /gene="glnA"
                     /locus_tag="WIX18_000004"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEZ5237180.1"
                     /translation="MSIKNAVKLIEESEARFVDLRFTDTKGKQHHFTVPARIVLEDPE
                     EWFENGQAFDGSSIGGWKGIQASDMQLRPDASTAFVDPFYDDATVVLTCDVIDPADGQ
                     GYDRDPRSIARRAEAYLKSSGIGDTAYFGPEPEFFVFDGIEFETDMHKTRYEITSESG
                     AWASGLHMDGQNTGHRPAVKGGYAPVAPIDAGQDLRSAMVNILEELGIEVEVHHSEVG
                     TGSQMEIGTRFATLVKRADQTQDMKYVIQNVAHNFGKTATFMPKPIMGDNGSGMHVHQ
                     SIWKDGQNLFAGDGYAGLSDTALYYIGGIIKHAKALNAITNPSTNSYKRLVPHFEAPT
                     KLAYSAKNRSASIRIPSVNSSKARRIEARFPDPTANPYLAFAALLMAGLDGIQNKIHP
                     GDPADKNLYDLPPEEDALVPTVCASLEEALAALKADHEFLLRGGVFSKDWIDSYIAFK
                     EEDVRRIRMAPHPLEFEMYYSL"
     gene            3965..4774
                     /gene="aroE"
                     /locus_tag="WIX18_000005"
     CDS             3965..4774
                     /gene="aroE"
                     /locus_tag="WIX18_000005"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEZ5237181.1"
                     /translation="MTALPRYSVFGNPVAHSKSPQIHRQFALQEGVDIEYGRICADIG
                     GFAQAVSTFFETGGCGANVTVPFKQEAFHLADEHSDRALAAGAVNTLILLKNGKLRGD
                     NTDGIGLANDITQVKNIAIEGKTILLLGAGGAVRGVIPVLKEHRPARIVIANRTHAKA
                     EELAQLFGIEAVPMADVNGGFDIIINGTSGGLSGQLPAVNPEIFRDCRLAYDMVYGEA
                     AKPFLDFARQSGAKQTADGLGMLVGQAAASYALWRGFTPNIRPVIEYMKAM"
     gene            4776..5477
                     /gene="mtgA"
                     /locus_tag="WIX18_000006"
     CDS             4776..5477
                     /gene="mtgA"
                     /locus_tag="WIX18_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HEZ5237182.1"
                     /translation="MFRIVKWLIALPVGIFIFFNAYVYGNIITYRAVAPHRTAFMSMR
                     MKQFEQEGRDVALDYRWVPYNRISVNLKKALIASEDARFAGHGGFDWGGIQNAIRRNR
                     NSGKVKAGGSTISQQLAKNLFLNESRSYIRKGEEAAITAMMEAVTDKDRIFELYLNSI
                     EWHYGIFGAEAASRYFYQIPAAKLSKQQAAKLTARVPAPLYYADHPKSKRLRNKTNIV
                     LRRMGSAELPESDTD"
     gene            complement(5680..5755)
                     /locus_tag="WIX18_000007"
     tRNA            complement(5680..5755)
                     /locus_tag="WIX18_000007"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5720..5722),aa:Phe,seq:gaa)
     gene            complement(5946..6680)
                     /gene="lptB"
                     /locus_tag="WIX18_000008"
     CDS             complement(5946..6680)
                     /gene="lptB"
                     /locus_tag="WIX18_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HEZ5237183.1"
                     /translation="MSANVSRLVVQNLQKSFKKRQVVKSFSLEIESGEVIGLLGPNGA
                     GKTTSFYMIVGLIAADAGSVMLDGQELRHLPIHERARLGVGYLPQEASIFRKMTVEQN
                     IRAILEIRTKDKNQIDREIEKLLADLNIERLRNNPAPSLSGGERRRVEIARVLAMKPH
                     FILLDEPFAGVDPIAVIDIQKIIGFLKSRGIGVLITDHNVRETLSICDRAYIISDGTV
                     LASGKPDDLVGNEQVRSVYLGENFKY"
     gene            complement(6754..7284)
                     /gene="lptA"
                     /locus_tag="WIX18_000009"
     CDS             complement(6754..7284)
                     /gene="lptA"
                     /locus_tag="WIX18_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HEZ5237184.1"
                     /translation="MIQKICKLFVLIAFFSASPAFALQSDSRQPIQIEADQGSLDQAN
                     QSTTFSGNVVIRQGTLNISAARVNVTRGGKGGESVRAEGSPVRFSQTLDGGKGTVRGQ
                     ANNVAYSSAGSTVVLTGNAKVQRGGDVAEGAVITYNTKTEVYTISGSTKSGAKSASKS
                     GRVSVVIQPSSTQKSE"
     gene            complement(7265..7846)
                     /gene="lptC"
                     /locus_tag="WIX18_000010"
     CDS             complement(7265..7846)
                     /gene="lptC"
                     /locus_tag="WIX18_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HEZ5237185.1"
                     /translation="MKIRWRYGIAFPLILAVALGGLSAWLGRISEVEIEEVRLNPDEP
                     QYTMDGLDGRRFDEQGYLKEHLSSKGAKQFPESSDIHFDSPHLVFFQEGRLLYEVGSD
                     EAVYHTENKQVLFKNNVVLTKTADGKRQAGKVEAEKLHVDTESQYAQTDTPVSFQYGA
                     SHGQAGGMTYDHKTGMLNFSSKVKATIYDTKDM"
     gene            complement(7843..8379)
                     /locus_tag="WIX18_000011"
     CDS             complement(7843..8379)
                     /locus_tag="WIX18_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ5237186.1"
                     /translation="MQAISPELQARAAKIKLLILDVDGVLTDGRIFIRDNGEEIKSFH
                     TLDGHGLKMLQASGVQTAIITGRDAPSVGIRVKQLGINYYFKGISDKRAAYEELRAQV
                     GVEEAECAFVGDDVVDLPVMVRCGLPVAVPDAHWFTLQHAAYIAKRPGGAGAVREVCD
                     LIMQAQGTLGAALNEYIK"
     gene            complement(8444..9418)
                     /locus_tag="WIX18_000012"
     CDS             complement(8444..9418)
                     /locus_tag="WIX18_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HEZ5237187.1"
                     /translation="MAENGKYLDWAREVLHTEAEGLREIAAELDENFVLAADALLHCK
                     GRVVITGMGKSGHIGRKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSG
                     ESDEIAAIIPALKRKDITLVCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTT
                     AVMALGDALAVVLLRARAFTPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGT
                     PLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHP
                     KTISAERLATEALKVMQANHVNGLLVTDADGVLIGALNMHDLLAARIV"
     gene            9514..10569
                     /gene="tal"
                     /locus_tag="WIX18_000013"
     CDS             9514..10569
                     /gene="tal"
                     /locus_tag="WIX18_000013"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HEZ5237188.1"
                     /translation="MTILSDVKALGQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNP
                     AIFQKAFAGDALYADEIAALKQQNLSPKQRYETMAVADVRAACGVCLAEHESTGGKTG
                     FVSLEVSPELSKDAQGTVEEARRLYAAIGCKNAMIKVPATDAGIDALEILVSDGISVN
                     LTLLFSRAQTLKAYAAYARGIAKRLAAGQSVAHIHVVASFFISRVDGALDTTLPDHLK
                     GKIAIALAKAAYQDWEQYFTTPEFAALEAQGANRVQLLWASTGVKNPAYPDTLYVDNL
                     IGAHTVNTVPDATLKAFIDHGTAKATLTEGVEEAQAQLAETAALGIDVETLANRLQED
                     GLKQFEEAFEKLLAPLV"
     gene            10723..11013
                     /locus_tag="WIX18_000014"
     CDS             10723..11013
                     /locus_tag="WIX18_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237189.1"
                     /translation="MAKALEIISPNEIYSDLIFKDPVPPHTIYRELMKLVSRNASNER
                     IADRAFDFFSSGLMDGSATEEQYNALYDLTLLEEPGMELNKDEIMALINSLK"
     gene            11030..11917
                     /gene="gluQRS"
                     /locus_tag="WIX18_000015"
     CDS             11030..11917
                     /gene="gluQRS"
                     /locus_tag="WIX18_000015"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HEZ5237190.1"
                     /translation="MYTGRFAPSPTGLLHIGSLLTAVASYADARSNGGKWLVRMEDLD
                     PPREMPGAASHILHTLEAFGFEWDGEVAYQSRRYALYEETLCRLKTAGLVYPCHCSRK
                     DWQTGARRGADGFVYNGRCRNPQQRPALQGKQPAWRIRVPDRDIGFSDGIVGGYAQNL
                     ARDIGDFVLLRADGYWAYQLAVVADDAEQGVTHIVRGQDLLVSTPRQIYLQQCLDVPT
                     PQYAHLPLLTNAQGQKWSKQTLAPALDLNRREQLLRQVFRYLNLPEAPEADRPAELLD
                     WAVAHWDMGKVPKHAITAP"
     gene            complement(11987..13003)
                     /gene="dusA"
                     /locus_tag="WIX18_000016"
     CDS             complement(11987..13003)
                     /gene="dusA"
                     /locus_tag="WIX18_000016"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HEZ5237191.1"
                     /translation="MINKELIEHKGKRRLCVAPMLDWTDRHYRYMARQITRNTWLYSE
                     MVNAGAIVYGDKDRFLMFNEGEQPVALQLGGSDPSDLAKAAKAAEEYGYNEVNLNCGC
                     PSPRVQKGAFGACLMNEVGLVADCLNAMQDAVKIPVTVKHRIGVDRQTEYQTVADFVG
                     TLRDKTACKTFIVHARNAWLDGLSPKENRDVPPLKYDYVYRLKQEFPGLEIIINGGIT
                     TNEEIAQHLQHVDGVMVGREAYHNPMVMREWDRLFYGDTRSPIEYADLVQRLYTYSQA
                     QIQAGRGTILRHIVRHSLGLMHGLKNARTWRRMLSDATLLKDNDGGLILEAWKEVERA
                     NMRE"
     gene            13124..14278
                     /locus_tag="WIX18_000017"
     CDS             13124..14278
                     /locus_tag="WIX18_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEZ5237192.1"
                     /translation="MATITKRRNPSGETVYRVQVRVSKKGYPAFNESRTFSKKALAVE
                     WGKKREAEIEADPELLFKRGKVKMMTLSEAMRKYLDETLGAGRSKKMGLRFLMEFPIG
                     GIGIDKLKRSDFAEHVMQRRRGIPELDIAPIAASTALQELQYIRSVLKHAFYVWGLEI
                     GWQELDFAVNGLKRSNMVAKSAIRDRLPTTEELQALTNYFLRQWQSRKSSIPMHLIMW
                     LAIYTSRRQDEICRLLFDDWHKNDCAWLVRDLKNPNGSVGNNKEFDILPMALPVIDGL
                     LEESVRKRMLANKGIADSLVPCNGKSVSAAWTRACKVLGIKDLRFHDLRHEAATRMAE
                     DGFTIPQMQRVTLHDSWNSLQRYVSVRKRSTRLDFKGAMMQAQSDIKSGK"
     gene            complement(14328..14594)
                     /locus_tag="WIX18_000018"
     CDS             complement(14328..14594)
                     /locus_tag="WIX18_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyocin activator PrtN family protein"
                     /protein_id="HEZ5237193.1"
                     /translation="MNISKEQGLLIAYGGRPYIPLREVHKDFFAHISFNAFKASGVRC
                     ELPFPIFRLSDSQKSEYFVSVQELAKAIADKEEKAKSEYRKFQS"
     gene            complement(14880..15863)
                     /locus_tag="WIX18_000019"
     CDS             complement(14880..15863)
                     /locus_tag="WIX18_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237194.1"
                     /translation="MQTAATRPTAKQMLAAKRAAKKSTQQERALKRAGTVKNVDRNRL
                     SASSKAQKENIAEMLSGEKVSEDKALTCSIMMWLSLQDMRYACNQELINLAEHIIKQV
                     QRLGLYCNTDDPANEKSVAFACREASQAVAKWTKDFDDLSPNQRQIVLRPLQNLFAAY
                     EAFLKDAPARLIAEVSTYSLAVRVAKKAMTFLELDGGLISAIDKVISGADSRAEARRL
                     KMPYAEFTDRILHAANLLYDVGIQADKELSAMYGKPLNPVRPQRISDVRQPMMKMLAS
                     NKGGALVQAVKDSEDIIRHCDNGTGFSCFNWTKHFKRAANLISLMHQEAAA"
     gene            complement(15745..16149)
                     /locus_tag="WIX18_000020"
     CDS             complement(15745..16149)
                     /locus_tag="WIX18_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237195.1"
                     /translation="MFAVFGKCRPEEEKRRRLVYNKDDSTWYEDRRKWKRLSNSRYQI
                     SPEYSTIETAEEFVRLSAGNPDIHIVGIRQVQEVNGKTVWKPVKTVLKGSKNANSSNK
                     TDGKTDACRQAGGEEINAARTRPETRGNSQKR"
     gene            complement(16159..17004)
                     /gene="bet"
                     /locus_tag="WIX18_000021"
     CDS             complement(16159..17004)
                     /gene="bet"
                     /locus_tag="WIX18_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage recombination protein Bet"
                     /protein_id="HEZ5237196.1"
                     /translation="MSIAQNQAVALAKQFNIQGDPQELVQTLKATAFKGNATDAQFNA
                     LMIVSTQYGLNPFTREIYAFPDKNNGITPVVGVDGWARIINSHPQFDGMDFAADAESC
                     TCKIYRKDRNHPITVTEYLEECKRNTQPWNSHPRRMLRHKAMIQAARLAFGFGGIYDE
                     DEAQRIQTTETPKEAKADPELDSLISNGEAAANKGMEAYKKWFSEIGAAGRLKLGSEN
                     HERFKQIAANTIEAETVETAKPAPTEEQFAALVEAISTGMKEVAEVLEAYALTEEQAA
                     EINAL"
     gene            complement(17016..17654)
                     /locus_tag="WIX18_000022"
     CDS             complement(17016..17654)
                     /locus_tag="WIX18_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translocation protein TolB precursor"
                     /protein_id="HEZ5237197.1"
                     /translation="MRIRCSSIADIIGKPKTKGEAITETAKSKLIEMAKRELFGFEAF
                     EGNAFTEKGDLMEETAIKYSGLVRGREYKKNIERRVNDWLTGECDVYDSDNRLIVDTK
                     CSWDIGTHPFFREEAEKKAAKAGYDWQMQGYMWLFDCDRADIDFWLLPTPEDLLKQWE
                     DREKYIELVEAIPIEKRITTVTVMRDDEKIELIKERVAACQTYYETLLNQYR"
     gene            complement(17651..17938)
                     /locus_tag="WIX18_000023"
     CDS             complement(17651..17938)
                     /locus_tag="WIX18_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237198.1"
                     /translation="MKAGNIVFKLAVLLAVLAAVLAAGYAFGFAKGSKSHTAKEKSAD
                     IAAMRMALAQKQAQVAELSAEIWLEERHLNAEEEADYRWVHGDAEVPEGKE"
     gene            complement(18091..18414)
                     /locus_tag="WIX18_000024"
     CDS             complement(18091..18414)
                     /locus_tag="WIX18_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237199.1"
                     /translation="MGIIGYSCPDWGMGGYYAREDRRQAWDDWEVENRILHESDLIEI
                     AKKSAREFIHNADGEPYAQEDWEMYLTEDASRVNKDTEAAMNYAIDDGDWFTLTENIG
                     RLANS"
     gene            complement(18555..18830)
                     /locus_tag="WIX18_000025"
     CDS             complement(18555..18830)
                     /locus_tag="WIX18_000025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237200.1"
                     /translation="MSYLDQPLKHGYGNGSGNGNGSGNGSGYGYGYGNGYGGVGGGGS
                     GSGYGNGNGYSNGSGNGYGSGSGKGKGNGSGSDGGGGGGYSNGSGNG"
     gene            complement(18827..19303)
                     /locus_tag="WIX18_000026"
     CDS             complement(18827..19303)
                     /locus_tag="WIX18_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237201.1"
                     /translation="MEANKFEVNSLSDLIKVFAGIAADFEAAMGVKRADIPTEFDEPQ
                     HEPQPPVTVAEQKGINDFAIGKEVIIRTYSAGVWFGVLKQKAGNEVILTKARRMYSWW
                     AKESISLSGVARHGIRQDGSQICGELDSVWLEAIEIIPVTGGAAESIRTALEVAQS"
     gene            complement(19336..19536)
                     /locus_tag="WIX18_000027"
     CDS             complement(19336..19536)
                     /locus_tag="WIX18_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237202.1"
                     /translation="MNELISKINRFGAREKDEQSLLLKVGEICRDAAATFTTRKSESI
                     SYTAFTFTVKKDGLKEKVMIVL"
     gene            complement(19852..20412)
                     /locus_tag="WIX18_000028"
     CDS             complement(19852..20412)
                     /locus_tag="WIX18_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237203.1"
                     /translation="MDIKTEEAYRLSFQHIQSHDVLAACRTVANYELSKPRPRGSFSG
                     ISAQEYWESYPCNEDAEILKSILLDSPEILDGISGGDMEMARVMAAFNFIWGLSHFPK
                     WLHRHEFASTPLDDSAVPAMLLFHAQSRQELKEYEEVELSCCPDGCEFCKSEDGKIYK
                     SSDAPVLPHAHCTHEQGCRCCYLPVI"
     gene            complement(20412..21110)
                     /locus_tag="WIX18_000029"
     CDS             complement(20412..21110)
                     /locus_tag="WIX18_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEZ5237204.1"
                     /translation="MNRVDRIKNLIADRFNGNQAEFSRAINKAPAQINQWLNGYRNIG
                     DGVAAQIETALGLPRGWVDGKDEPNIPIDSIKSNATVIGTVDAWDSKTPLSDDDCEVP
                     FYKDVCLSAGNGFSDEIEDYNGYKLRFSKSTLRRHGISPDDVVCVSADGDSMEPVFPD
                     GATLGINTADKMIKDGKIYAINHSGLLRTKILQKLPDNQVRIKSYNPEYKDETASLDS
                     LTVIGRVFWWSVLD"
     gene            21224..21454
                     /locus_tag="WIX18_000030"
     CDS             21224..21454
                     /locus_tag="WIX18_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEZ5237205.1"
                     /translation="MDLRDYCAIRGNQSDLARKTGISPSFIHQIARGLKPIPIQSATL
                     IEKSTNGRVTRKEMFPDTWHLIWPELADDQPK"
     gene            21557..22429
                     /locus_tag="WIX18_000031"
     CDS             21557..22429
                     /locus_tag="WIX18_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein"
                     /protein_id="HEZ5237206.1"
                     /translation="MKYIPNSFQIANAVVDDLLCLMSGNAWKCYGVIVRKTTGWQKEM
                     DYISVSQFKTLTGIKKDETVTDALKELEELNLIASVKQRGKVTGYRLNMPELPPENGG
                     TTTPKNWVHPKMGTTPKNWGVLPPENGGTTTPEKGGSTKHTIKPTNTKYSISASAAAD
                     APLPAKHSESGERAATVKAKPTKHETELSLLADYGIAGQVAADFLQVRKAKRQPLTET
                     AMKLLAADAEKCGMTALQAVEYAIGNGWASFRAEWLQNKTFGGSGNRGGLTHNQTAAV
                     LDARSYGDMPTTDF"
     gene            22440..23216
                     /locus_tag="WIX18_000032"
     CDS             22440..23216
                     /locus_tag="WIX18_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEZ5237207.1"
                     /translation="MALRGASDFLRAFCSVQTERRQCAEHGEYVAKSVFRGVWTGCPV
                     CQELEAADEMAAYAETLRREAMRNGLEKRIGRSGIAQRFRNCRIENYTVSESIPGMAR
                     AKAAAAEYAENFADVLQTGRNMIFSGRRGTGKNHLACGIAHEVIAAGKTALVITVGDM
                     LRTIKDSFGGGSETEAVGIFVKPDLLVLDEFGAGNLSETDGRILFSVINARYERLMPM
                     LVLTNLTAEAFRENTDARIRDRLRDGGGKLIPFDWDSYRA"
     gene            23544..24235
                     /locus_tag="WIX18_000033"
                     /pseudo
     CDS             23544..24235
                     /locus_tag="WIX18_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238710.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
     gene            24250..24666
                     /locus_tag="WIX18_000034"
     CDS             24250..24666
                     /locus_tag="WIX18_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3310 domain-containing protein"
                     /protein_id="HEZ5237208.1"
                     /translation="MTTPTPKTENPNRYRARDLWCNDFTQHLNFHLGSAFKYIFLHKD
                     DGGREDLEKALWHLKRQRNDAPKFKKLKNKLYFKLSEKLDACGFDTDTDTDTGQALDA
                     ILYAASEYNEDNISWATACVKALLKEMPPETERGGI"
     gene            24941..25084
                     /locus_tag="WIX18_000035"
     CDS             24941..25084
                     /locus_tag="WIX18_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237209.1"
                     /translation="MDTLLSIIIALSFGGAAILAIWLLVEAADAVLRRKRDGKDDGLE
                     SDI"
     gene            25230..25778
                     /locus_tag="WIX18_000036"
     CDS             25230..25778
                     /locus_tag="WIX18_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HEZ5237210.1"
                     /translation="MQNLPKQGNQSKAGRKTRGGKNRIFVPPCEHPRRGCPRTRRLPD
                     IGHRLVDKSKPGKRMRVMRLILPYPVSANRYWRIWRNRAVRSAEAAAYKKTVRRIAQE
                     AGAMPSEGSVAVRLRLIPKANKDGSANKTVIDLDNALKVALDALQGIAYHNDRQVRRI
                     VAEYADEPKQGGGLAVEIEELK"
     gene            25964..26569
                     /locus_tag="WIX18_000037"
     CDS             25964..26569
                     /locus_tag="WIX18_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1367 family protein"
                     /protein_id="HEZ5237211.1"
                     /translation="MAVNVAVVKTPVGTLAPATAYDAELLRDYAAGRQLKVEIKQMGN
                     RSYQHHKLFFGGLLPLAYEYWVPSGGLVTDGEQKLISGFARRLEAMHSSGGLFLEFAD
                     EFVRVVAAKRGERIGAVLQSMEAFRKWLTIEAGYFDVYETPDGYRKEAKSISFHSMGQ
                     EEFNRFYRDCFQVAWNMMLSSKFESEEAAERAAMEMMEMGG"
     gene            26566..26859
                     /locus_tag="WIX18_000038"
     CDS             26566..26859
                     /locus_tag="WIX18_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1364 domain-containing protein"
                     /protein_id="HEZ5237212.1"
                     /translation="MSKITQSARGERCQIRFPGICNHDPETTVFAHYRLAGYCGTGIK
                     PPDFMGAYACSRCHDLADGRLKADCAEGEIQTAFAEGVMKTLVLLHEKGLIKL"
     gene            26856..27263
                     /locus_tag="WIX18_000039"
     CDS             26856..27263
                     /locus_tag="WIX18_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237213.1"
                     /translation="MNQQEFEFMNDLARAFERRYRDTHSLNRCLSIEGRYMGEEVCPH
                     KPEIGLRYGEDAMFLTLQAWAKVDAPQQEAVRISFGIGAKSQAAYEERLQAEIRRRGE
                     QPLHLQTDLGLAAWYRAIRQAAGDDFDLLFEKV"
     gene            27485..27997
                     /locus_tag="WIX18_000040"
     CDS             27485..27997
                     /locus_tag="WIX18_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237214.1"
                     /translation="MSKAINKLNEKEKEKEKIRLLFAQREKFYRILENPEQGFTPPTA
                     LLKSGETCFLIDYVNMGEVVTESVRTYTGTRLKLGSTPVYLGGGKSVANEKQKNVAYG
                     ELVLTNFRLIFVGNMRSIDLPLDKINSVECFQSSIRISQSGKNKPIFFNTVFNPQLWK
                     EAILVLSDKK"
     gene            28308..29144
                     /locus_tag="WIX18_000041"
     CDS             28308..29144
                     /locus_tag="WIX18_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237215.1"
                     /translation="MNQVQYFNFNQNAIQVINKNGEAWFIASEVAAMLGYRDSYNMTR
                     ILDNDEKGTHNVSTLGGNQDVSVINESGFYHAAFKSRKPEVKPFRKWVTSEVLPTIRK
                     TGGYQIGQKTTVDDRTGLRQAVAALVGRKGIDYSSAYSMIHQRFNVEAIEDISTEKLP
                     EAVAYVHALTLHTGLTGEVLDREPLPAPALPISGNALYDLAVAVRYGAWAIQMGKDVS
                     APLKQLGCKQAVMMWTVWAETRSRLKAAANALEALNAHADAEHAAKIRPMLPEIRNLS
                     AV"
     gene            complement(29723..29905)
                     /locus_tag="WIX18_000042"
     CDS             complement(29723..29905)
                     /locus_tag="WIX18_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ5237216.1"
                     /translation="MQNTKFKTLLESAQITQADLSRRLGISPTSVSKWHKIGVPQYAA
                     AYLELLAKYNRLIDKI"
     gene            29971..30672
                     /locus_tag="WIX18_000043"
     CDS             29971..30672
                     /locus_tag="WIX18_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenosine phosphosulfate reductase"
                     /protein_id="HEZ5237217.1"
                     /translation="MAALSGLETIKEVRKRQNKTLLAFSGGKDAVATYLAIKDYFDEV
                     VPYYLYLVPDLAFVDEQLDMYERQFGFKIIKLPHPSLHRLLNNFVFQPPQNCAVIEDA
                     GLPDFDYTDIQAAMCQMHGLDKKTLVADGVRAADSPMRRIAIQTHGSISHNLLKYHPI
                     WDWKKADLVECFKKHNVRLGSDYKIFGRSFDGLDLRFLLPIKKHYPDDYKRILEFFPM
                     ADLEIFRWECANGKI"
     gene            30659..31078
                     /locus_tag="WIX18_000044"
     CDS             30659..31078
                     /locus_tag="WIX18_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237218.1"
                     /translation="MAKYDLKQQAADKVAAAKNQVAKWKRKQKPLVNMPELTGNPETD
                     SKNDLDAVKQGFRDRLKAENKRKVSATDSEYWSCICFQTRAQADAFIAAMNWRQFGDK
                     YIDGVKLAEYLGIELPDEEVAFVADPKVDKTWAGFVD"
     gene            31303..31908
                     /locus_tag="WIX18_000045"
     CDS             31303..31908
                     /locus_tag="WIX18_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237219.1"
                     /translation="MPVKGADICGAKTRSGGVCQSPAMPNGRCRLHGGKSTGAPKGHT
                     NSRKPGSLYSDFYTDEEKEIAAEIELESVDEELKLCKIRLRRAMRLEEEQKRRQDEDR
                     LELDRLVETPSVIGGVAIQDDPDVPPVKQKTFVYRDYGEIINRILARIESLTMTRQKL
                     LKGLVVDLKSSDGSMTPKTGLAAFESVEEFLKYAHEVDDMV"
     gene            31908..33314
                     /gene="terL"
                     /locus_tag="WIX18_000046"
     CDS             31908..33314
                     /gene="terL"
                     /locus_tag="WIX18_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HEZ5237220.1"
                     /translation="MEQGHINAARLKSYGSLYMFTRWMFYQRRGYIWQRANHHILICN
                     ALERVFNGETKRLIINIPPRYSKTEIAVVNFIAWAMGRVPDSEFIHASYSATLAVNNS
                     VQIRNLVQHEEYRAIFPDFALASESGHHWKTTAGGVMYATGAGGTITGFGAGKHREGF
                     GGCIIIDDPHKADEARSEVRRQNVIDWFQNTLESRKNSPETPIILIMQRLHENDLAGW
                     LLDGGNGEEWEHLCLPAIQDDGTALWPEKHDIETLHRMEQAAPYVFAGQYLQRPAPPD
                     GGTFKPDNLQFVKALPAGNIRWVRGWDLASTANDGDYTAGGRLGVTEDGRYIIANVVR
                     GQYGADERDRILRNTAQKDGVKTKISIPQDPGQAGKSQTLYLTRQLAGFSVSASPESG
                     DKVTRAEPFAAQVNIGNVMVLDDGTWGTDALIAEMRMFPNGQHDDQIDCLSRAFGELL
                     DTRTGMIDFLQSQVEAMK"
     gene            33311..35458
                     /locus_tag="WIX18_000047"
     CDS             33311..35458
                     /locus_tag="WIX18_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HEZ5237221.1"
                     /translation="MSKKTPLSQGFIARVAAGVRYAFTGNADGWFDAGEPLAPVAQQA
                     EGRRFDYEPFYNVGHSRPREREAVGFAQLRALADNYDVLRLVIETRKDQMECLKWTIQ
                     KRDVESTTNNESQRKDRKVDEAIAFFQSPDKEHTWADWLRILLEDLFVIDAPCIYPRK
                     TLGGDLYALEVMDGATIKRVLDNTGRMPLPPDIAYQQILHGMAAVDYTADELIYRSRN
                     NRSYKVYGYSPVEQIIMTVNIALKRQLHALEYYTAGSVPDALIGVPETWAMEDIKRFQ
                     EYFDLLLSGETAERRKLRYVPGELARNFKETKQPPLKDVYDEWLARVVCFAFSVEPTP
                     FVAQVNRSVAETSREQSLSDGMSSLKNWVKALIDDVLARYMNMAAYEFVWKEEESLNP
                     KEQAEIYAIYKNAGILTADEIRAELGKEPLPDQEEPEPNRQDDWKPEKQPNQEAEKLG
                     KSESPMSEDESAALIEAYLLTRIDGLAEQIAALIDSAAVDWQAEDLAAELSRAAGVVA
                     NGLNFGDWSGLSDVVEPIIRRVAEDGAVAALLRVMPEPAVGMVTNIRSRAVKWAHERA
                     AEMVGMKRVGGELIQNPAAEWQITEGTREMIRGQVVEAMRNGDSVQELAGRLKESHAF
                     SNARARTIARTETAMADGMGNLIGWEETGLVAGKQWITAKDDKVSDVCNANGEMGVIG
                     LHEPFSHGALTIPGHPNCRCAVVPVLAEDMPES"
     gene            35526..36671
                     /locus_tag="WIX18_000048"
     CDS             35526..36671
                     /locus_tag="WIX18_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 family phage prohead protease"
                     /protein_id="HEZ5237222.1"
                     /translation="MTKLYAEIAKMEAQDDGTVKVWGYASSEAVDSDGEVIAAEAMKA
                     AIPDYMKFGAVREMHGSNAAGTAIEINVEDDGRTFFGAHIVDPIAVTKVKTGVYKGFS
                     IGGSVTARDDLNKSQITGLKLTEISLVDRPANPDAVFTCFKADKPKADEEADKDEDDK
                     SADKTDETPADDAEKADGDKKDDKEDKEDEAEKSASVNLSESEIAILKAVLAKADKPK
                     DEPVAKSMYQVKSLADVLMSLKWLVDDAVYVDIDEAVIAQIKESAASLAESLKALAAS
                     EADKLVDGLAAKADKSDDIAKAESADELAKAQDALKKSNDALAKAQAEIESLKKQAAP
                     PKGSTKAIGKAEDNGEDPLKGFQPIVKNDGSLDDVATLIKAAQTGRL"
     gene            36712..38211
                     /locus_tag="WIX18_000049"
     CDS             36712..38211
                     /locus_tag="WIX18_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237223.1"
                     /translation="MNVNQLTQETIELMKSAQANGEPLNKGYTQPTSPTTGLQIYDLS
                     APSQKLYPVLTPLRNRIPRVGGGRAIDSNWKAITNINVGNQRAGISEGKRGGVINHEI
                     VERNARFRAIGLENQVTFEADYAARGFEDVRALAVAQTLQATMIAEEMILLGGNTSLK
                     SGVTPTPTAAVSNDATGKISGNTLSVICVALSLQAYWDVAGANNGAIGQSLNIKTAQV
                     PAKITRQNADGSTDTFGGGSAQKSAAASVSGIATGKKVTAMVPAVRGAVAYAWFWGAA
                     GSEKLGAVTTSAKVDILADAEGTQTAASLPSEDNSTSILEFDGLLTQIALPDSGAYWA
                     DNKGRGLTSDNAGGVYEFEEAFAHFFTRYRLSPDTIYVNARDLAALTKLIIGSNGAPM
                     IKLNVDVNNTANIRAGVVVGSYMNKITGDDLNIVVHPNLPAGTYLFYSSRLPAYVQGI
                     GNLLQVRTRQEYYQIEWPLRTRMYEYGVYADEVLQGMFMPAFGMITNVG"
     gene            38267..38527
                     /locus_tag="WIX18_000050"
     CDS             38267..38527
                     /locus_tag="WIX18_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237224.1"
                     /translation="MTEMVKLQAPEGFTDVSFGSQSYAVGENGVVEVPSEAAEFLYQF
                     GFGNVAAEPAEEPEKAKRGRKPKTEQPVEQAEPAEAEAEKAE"
     gene            38530..39060
                     /locus_tag="WIX18_000051"
     CDS             38530..39060
                     /locus_tag="WIX18_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage gp6-like head-tail connector protein"
                     /protein_id="HEZ5237225.1"
                     /translation="MAALVSLEEFKQRIGVEHDRRDDFFLSVIDGVSAAVEAYIGRSL
                     WAADYVERYDGNGKDRIVLDNYPVLSVSSVKINGADVGGWEFDNWLLMRPEGFTRGLR
                     NVEVSYRAGYEHIPADIREAVMIIAMQRVNEIENRGAQSKTLAGESVSFSALPETGGM
                     PPSAFSILKEYRRKGV"
     gene            39060..39542
                     /locus_tag="WIX18_000052"
     CDS             39060..39542
                     /locus_tag="WIX18_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HEZ5237226.1"
                     /translation="MVKVEFIGGDILAAVFKAYAADVQDAVVKSVGRSALRLQREVKQ
                     NRLSGQVLRVRTGNLRRSIHQRVNVSGNVVSGEVNTNVRYGIAHEYGFAGNVNVKASL
                     RQVKQAFGKPLKSPRYVHVRAHTRDVKLPERSFLRSALRDLTPKFADDLQKSIRKVLK
                     "
     gene            39539..39967
                     /locus_tag="WIX18_000053"
     CDS             39539..39967
                     /locus_tag="WIX18_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237227.1"
                     /translation="MNREAVYSALWSKLDALGGFVTKSRKLLHWNDVKRYDQPALFMA
                     QGDMQALTLTGQETKWILRVDVYLYVQTAGEPPAPIMNPLIDAVCNAVNAVHPVTGKT
                     DLTADGADIEYCRVEGTVETDEGTLGEQAVCIIPIVICAA"
     gene            39994..40767
                     /locus_tag="WIX18_000054"
     CDS             39994..40767
                     /locus_tag="WIX18_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237228.1"
                     /translation="MQLTFGAGEVFAQMITDAYGNRVQNATPVRIMGLQEMSVDLSAE
                     LKEFYGQNRFALAVAQGKVKVSGKFKGALINGLTLNTLFFGAEYATGTMKALWADTTG
                     KAIPARGAYTVQATAPNGGTFVEDAGVMGQDGTAFIKVAGNPTAGQYMVSETGLYTFN
                     EADKGKTVYPSFTYTQTMPSAKKIDLSNMAMGNTPTFQLKYLTQFKGKKALLELESVT
                     SGKLGLFSTKNDDFSVPEIDFTASTDEAGFKVGTLWIQE"
     gene            40826..41155
                     /locus_tag="WIX18_000055"
     CDS             40826..41155
                     /locus_tag="WIX18_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237229.1"
                     /translation="MTVRIKGVTVELNGVDYVIPPIALGALEQLQERIGTFDGNAMDA
                     KQISTVIDCAHAALKRNYPDLTREEVADLIDIGNMNEVFAAVMDVSGLKRKEQEAAQA
                     GEAQAAD"
     gene            41167..41433
                     /locus_tag="WIX18_000056"
     CDS             41167..41433
                     /locus_tag="WIX18_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237230.1"
                     /translation="MIAHVCASTGWTWDYVADNLDLPRIKHLNEYWREHPPVHILVAS
                     YMGIKPSSGSAQSEADEAEAIGMLGGNELSEDEFNALLKAKGII"
     gene            41433..42032
                     /locus_tag="WIX18_000057"
     CDS             41433..42032
                     /locus_tag="WIX18_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2460 domain-containing protein"
                     /protein_id="HEZ5237231.1"
                     /translation="MGNAIFPTFPGLKWGRNKTAVWSTGTQKSASGREFRTAYYTYPQ
                     WRFSLSFEVLRTKASVNELEQLAGFFNARKGSFESFLYEDPTDNAVTDQPVGNTVQGV
                     TRYQLVRSMGGFIEPVLAVKERPAVKVGGVALTYGRDYTVTDKGVLVFNAPQPPNSLI
                     TWTGGFYFRVRFTSDTVDFENVLGSLWAAKKIEFTSVKL"
     gene            42029..42883
                     /locus_tag="WIX18_000058"
     CDS             42029..42883
                     /locus_tag="WIX18_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2163 domain-containing protein"
                     /protein_id="HEZ5237232.1"
                     /translation="MKTATKELIDLLHSSDEFQMADLYTITLSGGQVLRHTGADMPVV
                     WDGQTYEAHKLIIKRGATRIAVGLDVDSNTLQISAAPDYRLEGLQWAEAALGGVLDGA
                     RVKIDRVFFDAELRPVGAVNIFSGRVSDVSGSRSSVKVDVKSDIELLNVSSPRNIYQA
                     GCMRTLYDDGCKVNREKFTVNGRVTENSQTGTVLKHNLTQPDGWFSQGVIKFTSGRNA
                     GLSRTVKVHSGNTFEFALRLPFPPQAGDVFKVYPGCDKRQSTCKDKFQNIVHFRGFPY
                     IPSADTVV"
     gene            42899..43318
                     /locus_tag="WIX18_000059"
     CDS             42899..43318
                     /locus_tag="WIX18_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237233.1"
                     /translation="MDLRARIVEEARSWLGTPYHHHAMVKGAGVDCAMILVAVYGAVG
                     LVPEGFDPRPYPQDWHLHRDSERYLGFITQFCRETKSPKAGDIAVWRFGRSFSHGGIL
                     AGDGKIIHSYIGRGVVLDDINQAELIGREVRFFTFSF"
     gene            complement(43346..43624)
                     /locus_tag="WIX18_000060"
     CDS             complement(43346..43624)
                     /locus_tag="WIX18_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HEZ5237234.1"
                     /translation="MESQTFASVFDALCDTPAEAANMRLRADLMMHIADTVRENGWTQ
                     KQAAEHCGLTQPRINDLLNGKIDKFSLDALVNINAELGQCISLSFAPA"
     gene            complement(43624..43950)
                     /locus_tag="WIX18_000061"
     CDS             complement(43624..43950)
                     /locus_tag="WIX18_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEZ5237235.1"
                     /translation="MKPLNFLGDSLDCLRQFPENAKQAAGYQLHRIQCGGMPVDFKPM
                     NTIGSGVMEIRLREEGGAYRVIYTAKIADAVYVLHAFQKKSQKTAPADLELAKKRYNK
                     LIQEKK"
     gene            44023..49149
                     /locus_tag="WIX18_000062"
     CDS             44023..49149
                     /locus_tag="WIX18_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1983 domain-containing protein"
                     /protein_id="HEZ5237236.1"
                     /translation="MGGKSSTITSAEERILSLQVQRSSQGLTLPVIYGRTRVAGNLVW
                     YGDFVTIEHKTTTRQGGKGGGGVKQVDISYTYEAAVMLALCEGEIQGVGRIWRDKEKF
                     DSLAQLRLTLMRGGDEQPLWTHLQQAKHQDQALNYSGTAYLCSPNYELTKSAQIYQHN
                     FEVIGKLGYSGNIPDANPREIVLDLLTNQRYGCGFPSQNIGDTDRYSNYCRAVGIFLS
                     PAYTEQGEAQRNISELLEQTNSAAVFSQGRLKIIPYGDGSYSGNGAVYVADNKAVYDL
                     SDDDFIVSGAKDPVKVERKTNADAFNQIQVEYLDRDNDYNVAIAEVKDQANIEQYGLR
                     PKDTVKMHGICDAKVAQKVAQQLLQRALYVRNEYEFKLGWKYCLLEPMDIVTLTDAGL
                     GLNKTPVRITEIEEDEEGVLSVKAEDYPVGVYTVSEYPTQPSLGYSADYNVSPGNAHV
                     PVIFEAPLQLTGGEPQIWLATAGGDMWGGAEVWVSTDGDSYTRVGAVNHKARFGSLTA
                     ALPNGAVFDRTNTLGVEISAGQLTGGTEQDSRDLLTLCYVDGEFLAYANAELKGVGRY
                     TLGNLTRGAYGSTIDAHAAGSQFARIDDTLFRYTVPRNWIGRTVWVKLVSYNVFSGGI
                     QDLAEVPAYSYTIKGAPLGQIQNLRLTSSWAYGKEAVIAWDKLGGADTYDVEVYAGNT
                     QKRLRSLSGIVDNGFTYTQADMKADGGQVRDVVFKVRGRAVTGKTGNWAQVAAQNPQL
                     KPLQGIEIDSGLRQAFFKCAMPSEEDFAGIVIWVSENQAVPTTDANKAYDGAETFISI
                     TKCNGKDLQQGKTYYLRAAGYDSFGKDGMHVSNSIAFTVADVSVTNLKGSNLNKDLRN
                     KIALIDGNGAGSVNARIAAEAQARAVVARAAEDAKAAAKKAADDLTTKAAEIGGKIAV
                     VERVNNKQAQQIRTVTAAQGTTAAGLEAEKKARADGDRAEAAARKTLAGRVSAAEGNI
                     TRETQARVTAINAQTAATEALKTRVGNTESSITALRETVNQKDSARSSEIQTLTAKID
                     GVSVGGRNYALSTGTPGKVLTVNGNNQTKNVTIDVSSALELKQGDSLIISCDIELTNA
                     TSPYGKPSPRIGAELSVTYADNSIGYFAAWYEEAVSGTTKTLKQRIVAKHTVAKEVKA
                     LRNIIVQARYQTSEAIKVSNVKLERGTVATDWTPAPEDNDGLQEVRGAVQVVQTALSK
                     ATGDIRALGERIATAQSTADGNTAAVQAHARSINGLEAQYTVKVDVNGKVAGYGLAST
                     PKNGTPESKFIVNADRFGIGAPGKADVFPFTVDTRQNRVGVNGELVVNGKAIVDRLNA
                     GDIHGDKIAANTLNANRLKARSVTAREIRAGAVTADKMNVTSLSAVSSNLGSITGGSL
                     NIGNGNFTVSSDGILTANNAVIRGRIEADSGYFNGTVRASSVEGDVMKAHRLRWTEGN
                     VWVLDLDTDPLPRVLIPNFRVISETYGNKVVQARLMLNGVLLNPLVTKDYELFRRYYW
                     DNAHNSRKPKRGNSYIELTDYRYKTRLEYPIQIIPAGKPISLKLTLASHESVFSPFVS
                     VSYLSQSDYEYKQLLGRMVWRTFAEDFRYDNRRQVYLGGDRRVHNYQNQMRNHWEPYG
                     GLLQLPDNIYGISFEYRLYTNRDWSTMITFDRSDAYEVVKKYRANGFGPYSLYEREFD
                     TAIPKSNLLFFVEKSWQYIELRNIRVLIPESRENEVWQVG"
     gene            49265..49570
                     /locus_tag="WIX18_000063"
     CDS             49265..49570
                     /locus_tag="WIX18_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237237.1"
                     /translation="MSEGKKIVALGFSAEDGMTGAVAAYHVVEYIGADYRNGFITATL
                     NGYVSENAFKSGKQYLLTRTLDFQEAVITAPDPDWVYRKALEGASGIPKDAQPVYAE"
     gene            49636..50112
                     /locus_tag="WIX18_000064"
     CDS             49636..50112
                     /locus_tag="WIX18_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237238.1"
                     /translation="MGRLGWILGWRFLPAKFQAWLFGTATRVLEAVSGLGLVGYAAVF
                     AFAPDEIYAWRIYYKFQDIPEAWTVGVLGAAGLLQTALLFARGFKGNVVAAYLLLFSG
                     FVWFLISVAFLGAYPPLNTGMVVPPLLAFFCALAGNNALKFLFSAQKARGLADEGS"
     gene            50113..50445
                     /locus_tag="WIX18_000065"
     CDS             50113..50445
                     /locus_tag="WIX18_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237239.1"
                     /translation="MEFFQLGLLFAALGGVLGGVWASLQEHDRPVQALLEAVISAIAA
                     AAVAERFVPLNQVWTCAAAGVFVGMMTGHALDTVRALAPKVLRGYLGGLAEKATGVKD
                     GGSSDGKD"
     gene            50487..51029
                     /locus_tag="WIX18_000066"
     CDS             50487..51029
                     /locus_tag="WIX18_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02594 family protein"
                     /protein_id="HEZ5237240.1"
                     /translation="MKELAWLAEARKHIGLKEIVGANAHNPTIVQWLKEMGSFPGASK
                     SWYFEDETPWCGLFVGYCLGKAGRAVIKDWYRAKAWSMSGLTKLEAPAYGCLGVKTRR
                     GGGHVFFVVGIDAKGRVLGLSGNQGNMVSIVPFDPADIDGYYWPSKLIGGKAVPSFPT
                     EARYQLPFVATTAKQGGSEA"
     gene            51030..51374
                     /locus_tag="WIX18_000067"
     CDS             51030..51374
                     /locus_tag="WIX18_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237241.1"
                     /translation="MLGFLLKNWKPLLILSAIAFFAVSWRQDRTAQYRRGRDDATLEI
                     SERLKAAAIEGAEQSRKSSSAYQAQKAAREERERVRYVQVQKIVEKPVYRNVCLDADG
                     VSIVNAAIDDGG"
     gene            51349..51531
                     /locus_tag="WIX18_000068"
     CDS             51349..51531
                     /locus_tag="WIX18_000068"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237242.1"
                     /translation="MPPLTTAVKPPADLVQPCPKLPHLEGNTGADALPWSLQVIGLYK
                     DCKARHGALVRALGAD"
     gene            51735..51896
                     /locus_tag="WIX18_000069"
     CDS             51735..51896
                     /locus_tag="WIX18_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237243.1"
                     /translation="MTAKEFCEKQIAYWANESRKASDDADLKAFEFAEQELANYREML
                     KQVLKRYAV"
     gene            51925..54981
                     /locus_tag="WIX18_000070"
     CDS             51925..54981
                     /locus_tag="WIX18_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tape measure protein"
                     /protein_id="HEZ5237244.1"
                     /translation="MSDLEAKVRITVENHTKHGFDSAAADVDKAAEKIRGSGDNAAKG
                     FKSAIGNMNETMRSFKVNMKSGFEAVGNQAQQAADKVKTEVDKIGSGLSGLTGLLAGL
                     ASVGFAKSMLDTADAVQSINSQIRQVVSSETEYLAVQRQLLDTANRTRASLESTASLY
                     VSTSRALKDYGYTQQEILKFTEATNNAMTIGGVGAQQQAAALMQLSQALGSGVLQGDE
                     FKSIAEAAPILLDTIAEYMGKSRAEIKKLGSEGQLTADVIFKAISGASEKFGEQATKM
                     PMTMGQALTVFSNNWQSMVSKLLNDSGTMSGIAAVIKLIADNLNLVVPIVAGFAAAIA
                     AAVAPTLALNLALLANPFGIIAVAIGTVIGLIAKFGDEIDVFGGGWSNLSDVIRAVWQ
                     IITETIGEAVGTVKSWFDGLTGWLNESVGGWSSLFGRVMSVISSAIGAYVNVYINIFA
                     TGWMLIKEAANDMPQFFANLGKLIGNAFLSAIEWMINKAVGMINSMIDFANAALSMVG
                     GSGIKKLDGVDLKRMDDGGLGKRITDSMTKDRAGAMANAIRERAADIHEADALKGRGD
                     GGHPKPAQKKTGANQGGGKGGKSRSGGSGAAKDPMQAWEEEIKAQKLAHREMQRETLT
                     HQEWDLAREAEYWRAKLATVDFNGKTGKEIRTKILALEDQLSKQSTEAKMNQVAEWEK
                     LDKHKLEMEKDAADQALADGRISQLERLDMEIEFENRRYQIAYDALQERIALAEQDPT
                     YSQTAIDKLKAQMGELGQGHERTQAKNEGKRENQRRKDAPNVMEMLQDGGKNVWQQAQ
                     QQMSQAFTAMLTRAQSFRQAMGGVFSSIRQTFVQEMVSKPLAALVGRFAKEGAMWLAN
                     GTRQIAAQTATSAAVTGIKKVETTENVGMNAIQAAAEAFKAMAGIPYVGPILAVGAAA
                     AAMAAVYGLMSGMGGGGSSTSTTTTRIPSAAGGWDIPAGINPLTQLHENEMVLPAEHA
                     QTIREMAGQQGGSDSTIIINSTGGDFIHKNDLAKLLRQMKRDFKFV"
     gene            complement(55015..55224)
                     /locus_tag="WIX18_000071"
     CDS             complement(55015..55224)
                     /locus_tag="WIX18_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEZ5237245.1"
                     /translation="MIDNPELGYTPANLKAVRQKYGLTQKQVANIAGATLSTAQKWEA
                     AMSLKTHSDMPHTRWLLLLEYVRNL"
     gene            complement(55217..55588)
                     /gene="acrIIC2"
                     /locus_tag="WIX18_000072"
     CDS             complement(55217..55588)
                     /gene="acrIIC2"
                     /locus_tag="WIX18_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_042743678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-CRISPR protein AcrIIC2"
                     /protein_id="HEZ5237246.1"
                     /translation="MSKNNIFKKYPPIIHGEARGENDEFVVHTCYPRFLARKSFDDNF
                     TGEIPAKPIDGELGQIGEPLRLAYDSRIGLWLSDFIMLDKNKPENMEEWLEQLKAACD
                     RIAADDLMLNEDAAALEGWDD"
     gene            complement(55634..55984)
                     /gene="acrIIC3"
                     /locus_tag="WIX18_000073"
     CDS             complement(55634..55984)
                     /gene="acrIIC3"
                     /locus_tag="WIX18_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_042743676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-CRISPR protein AcrIIC3"
                     /protein_id="HEZ5237247.1"
                     /translation="MFKRAIIFTSFNGFEKVSQTEKRQLAKIINSEVSIINEHLEAKA
                     TNASLDGQYRAFLFNDESPAMTEFLAKLKAFAESTAGINIDAWEIEESEYNSLPLKQK
                     DFLAAANGKEIFKI"
     gene            complement(56340..56831)
                     /locus_tag="WIX18_000074"
     CDS             complement(56340..56831)
                     /locus_tag="WIX18_000074"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HEZ5237248.1"
                     /translation="MRAVIQKTVGAKVDVVSENGTETCGKIDGGFVVLLGVTHSDTEK
                     DARYIADKIAHLRVFEDEAGKLNLSLKDVGGAVLLVSQFTLYADATSGRRPSFSQAAP
                     AEQAQQLYLRTAELLRGHGIHVETGRFRTHMQVSLCNDGPVTILLDSFMTRISPKMKV
                     VPD"
     gene            complement(56905..57663)
                     /locus_tag="WIX18_000075"
     CDS             complement(56905..57663)
                     /locus_tag="WIX18_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ5237249.1"
                     /translation="MKQKKTAAAVIAAMLAGFAAAKAPEIDPALVDTLVAQIMQQADR
                     HAEQSQKPDGQAIRNDAVRRLQTLEVLKNRALKEGLDKDKDVQNRFKIAEASFYAEEY
                     VRFLERSETVSESALRQFYERQIRMIKLQQVSFATEEEARQAQQLLLKGLSFEGLMKR
                     YPNDEQAFDGFIMAQQLPEPLASQFAAMNRGDVTRDPVKLGERYYLFKLSEVGKNPDA
                     QPFELVRNQLEQGLRQEKARLKIDAILEENGVKP"
     gene            complement(57734..58600)
                     /locus_tag="WIX18_000076"
     CDS             complement(57734..58600)
                     /locus_tag="WIX18_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ5237250.1"
                     /translation="MKAKILTSVALLACSGSLFAQTLATVNGQKIDSSVIDAQVAAFR
                     AENSRAEDTPQLRQSLLENEVVNTVVAQEVKRLKLDRSAEFKNALAKLRAEAKKSGDD
                     KKPSFKTVWQAVKYGLNGEAYALHIAKTQPVSEQEIKAAYDNISGFYKGTQEVQLGEI
                     LTDKEENAKKAVADLKAKKGFDAVLKQYSLNDRTKQTGAPVGYVPLKDLEQGVPPLYQ
                     AIKDLKKGEFTATPLKNGDFYGVYYVNDSREVKVPSFDEMKGQIAGNLQAERIDRAVG
                     ALLGKANIKPAK"
     gene            complement(58649..58927)
                     /locus_tag="WIX18_000077"
     CDS             complement(58649..58927)
                     /locus_tag="WIX18_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HEZ5237251.1"
                     /translation="MPAVDLIRERLQTLDPLVLEIGDESHLHKGHAGNTGGGHYAVLV
                     VSGRFEGVSRLNRQKTVKSLLKDLFSGGMIHALGIRAATPDEYFHTAD"
     gene            complement(58927..59217)
                     /locus_tag="WIX18_000078"
     CDS             complement(58927..59217)
                     /locus_tag="WIX18_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEZ5237252.1"
                     /translation="MEYFMLLATDGENVYEARMAARPEHLKRLETLKSEGRLLTAGPN
                     PLPEDSNRVSGSLIVAQFESLDAAEAWAEDDPYVHAGVYSEVLIKPFKAVFK"
     gene            complement(59220..59750)
                     /locus_tag="WIX18_000079"
     CDS             complement(59220..59750)
                     /locus_tag="WIX18_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HEZ5237253.1"
                     /translation="MKFVSDLFSVILFFATYTVTKNMITATAVALVAGVVQAAFLYWK
                     YKKLDTMQWVGLVLIVVFGGATIVLGDSRFIMWKPSVLFWLGALFLWGSHLAGKNGLK
                     ASIGREIQLPDAVWAKLTYMWVGFLIFMGIANWFVFTRFESQWVNYKMFGSTALMLVF
                     FIIQGIYLSTCLKKED"
     gene            60039..62450
                     /locus_tag="WIX18_000080"
     CDS             60039..62450
                     /locus_tag="WIX18_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FimV family protein"
                     /protein_id="HEZ5237254.1"
                     /translation="MKNNRQIKLIAASVALAASFQAHAGLGGLNIRSNLDEPFSGSIT
                     VTGEEAKALLGGGSVTVSEKGLTAKVHKLGDKAVIAVSSAQAVRDPVLVFRIGAGAQV
                     REYTAILDPVGYSPKTKSALSDGKTHRKTAPTAESQENQNAKALRKTDKKDSANAAVK
                     PAHNGKTHTVRKGETLKQIAAAIRPKHLTLEQVADALLKANPNVSAHGRLRAGSVLHI
                     PNLNRIKAEQPKPQTAKPKAETASMPSEPSKQATVEKPVEKPEAKVAAPEAKAEKPAV
                     RPEPVPAANTAASETAAESAPQEAAASAIDTPTDETGNAVSEPVEQVSAEEETESGLF
                     DGLFGGSYTLLLAGGGAALIALLLLLRLAQSKRARRTEESVPEEEPDLDDAADDGIEI
                     TFAEVETPATPEPAPKNDVNDTLALDGESEEELSAKQTFDVETDTPSNRIDLDFDSLA
                     AAQNGILSGALTQDEETQKRADADWNAIESTDSVYEPETFNPYNPVEIVIDTPEPESV
                     AQTAENKPETVDTDFSDNLPSNNHIGTEETASAKPASPSGLAGFLKASSPETILEKTV
                     AEVQTPEELHDFLKVYETDAADDLSALLQPAEALSVEENITETVAETPDFNATADDLS
                     ALLQPSEVPAVEENAAETVADDLSALLQPAEAPAVEENVTETVAETPDFNATADDLSA
                     LLQPAEVPAVEENAAEITLETPDSNTSEADALPDFLKDGEEETVDWSIYLSEENIPNN
                     ADTSFPSESVGSDAPSEAKYDLAEMYLEIGDRDAAAETVQKLLEEAEGDVLKRAQALA
                     QELGI"
     gene            complement(62623..63039)
                     /gene="gloA"
                     /locus_tag="WIX18_000081"
     CDS             complement(62623..63039)
                     /gene="gloA"
                     /locus_tag="WIX18_000081"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HEZ5237255.1"
                     /translation="MRLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFV
                     GYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGP
                     MKHGTTVIAFVEDPDGYKIEFIQKKSGDDSVAYQTA"
     gene            complement(63064..64233)
                     /gene="lapB"
                     /locus_tag="WIX18_000082"
     CDS             complement(63064..64233)
                     /gene="lapB"
                     /locus_tag="WIX18_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HEZ5237256.1"
                     /translation="MDNELWIILLPIILLPVFFAMGWFAARVDMKTVLKQAKSIPSGF
                     YKSLDALVDRNSGRAARELAEVIDQQPQSYDLNLTLGKLYRQRGENDKAINMHQTLLD
                     SPDTTGAKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGEMAREARQHLLNIYQQDRD
                     WEKAVETARLLSHDEQTYQFEIAQFYCELAQAALFKSNFDAARFNVGKALEANKKCTR
                     ANMILGDIEHRQGNFPAAVEAYAAIEQQNHAYLSMVGEKLYEAYAAQGKPEEGLNRLT
                     GYMQTFPELDLINVVYEKSLLLKGEKEAAQTAVELVRRKPDLNGVYRLLGLKLSDMNP
                     AWKADADMMRSVIGRQLQRSVMYRCRNCHFKSQVFFWHCPACNKWQTFTPNKIEV"
     gene            complement(64244..64558)
                     /locus_tag="WIX18_000083"
     CDS             complement(64244..64558)
                     /locus_tag="WIX18_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1049 domain-containing protein"
                     /protein_id="HEZ5237257.1"
                     /translation="MKLIYTVIKIIILLLFLLLAVINTDAVTFSYLPGQKFDLPLIVV
                     LFGAFVVGIVFGMFALFGRLLSLRGENGRLRAEVKKNARLTGKELTAPPAQNAPESAK
                     QP"
     gene            64868..65866
                     /gene="ilvE"
                     /locus_tag="WIX18_000084"
     CDS             64868..65866
                     /gene="ilvE"
                     /locus_tag="WIX18_000084"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HEZ5237258.1"
                     /translation="MSRPVPAVFGSVFHSQMPVLAYREGKWQPTEWQSSQDLSLAPGA
                     HALHYSSECFEGLKAFRQADGKIVLFRPTANIARMRQSADILHLPRPETQAYLDALIE
                     LVKRAADEIPDAPAALYLRPTLIGTDPVIGKAGSPSETALLYILASPVGDYFKVGSPV
                     KILVETEHIRCAPHMGRVKCGGNYASAMHWVLKAKAEYGANQVLFCPNGDVQETGASN
                     FILINGDEIITKPLTDEFLHGVTRDSVLTVAKDLGYTVSERNFTVDELKAAVENGAEA
                     ILTGTAAVISPVTSFVIGGKEIEVKSQERGYAIRKAITDIQYGLAEDKYGWLVEVC"
     gene            complement(66110..66895)
                     /gene="fabI"
                     /locus_tag="WIX18_000085"
     CDS             complement(66110..66895)
                     /gene="fabI"
                     /locus_tag="WIX18_000085"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HEZ5237259.1"
                     /translation="MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKL
                     EERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSG
                     DFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVM
                     GMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLR
                     RNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYSINALSTEG"
     gene            complement(67050..67871)
                     /gene="dapD"
                     /locus_tag="WIX18_000086"
     CDS             complement(67050..67871)
                     /gene="dapD"
                     /locus_tag="WIX18_000086"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HEZ5237260.1"
                     /translation="MSLQNIIETAFENRADITPTTVTPEVKEAVLETIRQLDSGKLRV
                     AERLGVGEWKVNEWAKKAVLLSFRIQDNEVLNDGVNKYFDKVPTKFADWSEDEFKNAG
                     FRAVPGAVARRGSFVAKNVVLMPSYVNIGAYVDEGAMVDTWATVGSCAQIGKNVHLSG
                     GVGIGGVLEPLQASPTIIEDNCFIGARSEIVEGVIVEEGSVISMGVFIGQSTKIFDRT
                     TGEIYQGRVPAGSVVVSGSMPSKDGSHSLYCAVIVKRVDAQTRAKTSVNELLRGI"
     gene            complement(68081..69724)
                     /gene="pgi"
                     /locus_tag="WIX18_000087"
     CDS             complement(68081..69724)
                     /gene="pgi"
                     /locus_tag="WIX18_000087"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEZ5237261.1"
                     /translation="MNAFTRAWYALERHYQDTRHVLLRDRFACEPDRFERMHERLDGM
                     LFDYSKNRLGEDTLQLLCRLAETADLEGKMRALRTGAKVNGSEGRAALHTALRLPDGA
                     DAVYVDGRDVLPEIRRELNRALEFAHSLDDGSYQGITGKRITDFVHIGIGGSDLGPAM
                     CVQALEPFRRHIAVHFAANADPACLDAVLCRLNPETTVFCVASKSFKTPETLLNAQAV
                     KAWYRGAGFSESETACHFCAVSADTAAAAAFGIAAERVFAMYDWVGGRYSVWSPVGLP
                     VMVAVGGARFRELLAGAHAMDSHFFHTPPRRNIPVLMALIAVWYNNFQHADGQTAVPY
                     SHNLRLLPVWLNQLDMESLGKSRASDGSPAVCKTGGIVFGGEGVNCQHAYFQLLHQGT
                     RLIPCDFIVPVTAQGVEDGRSRFTVANAFAQAEALMKGKTLDEARAELADLPEAERER
                     LAPHKEFPGNRPSNSILLDRLTPYNLGMLMAAYEHKTFVQGAIWNVNPFDQWGVEYGK
                     QLAKTIIGELEGGTSVHDASTEGLMAFYRECRLKGGGAA"
     gene            70234..71466
                     /gene="pilG"
                     /locus_tag="WIX18_000088"
     CDS             70234..71466
                     /gene="pilG"
                     /locus_tag="WIX18_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4 pilus assembly protein PilG"
                     /protein_id="HEZ5237262.1"
                     /translation="MAKNGGFSLFAKKEKRFIFEGRHSASDKLVNGEVSAFTEEEARK
                     KLAKRGIRPLQITRVKTSSKRKITQEDITVFTRQLSTMIKAGLPLMQAFEIVARGHGN
                     PSMTEMLMEIRGEVEQGSSLSRAFSNHPKYFDRFYCNLVAAGETGGVLESLLDKLAIY
                     KEKTQAIRKKVKTALTYPVSVIAVAIGLVFVMMIFVLPAFKEVYANMGAELPALTQTV
                     MDMSDFFVSYGWMVLIALGFAIYGFLKLKARSIKIQRRMDAILLRMPIFGDIVRKGTI
                     ARWGRTTATLIAAGVPLVDVLDSTAGAAGNLIYEEATREIRTRVIQGLSMTSGMRATE
                     LFPNMMLQMSSIGEESGSLDDMLNKAAEFYEDEVDNAVGRLSAMMEPIIIVILGLVIG
                     TLLVAMYLPLFNLGNVVA"
     gene            71540..72400
                     /locus_tag="WIX18_000089"
     CDS             71540..72400
                     /locus_tag="WIX18_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEZ5237263.1"
                     /translation="MSDLSVLSPFAVPLAAVFGLLVGSFLNVVIYRVPVMMERGWTVF
                     AKKHLNLPLTEKESRTFNLMKPDSCCPKCRVPIRAWQNIPIVSYLLLRGKCASCQTKI
                     SIRYPLIELLTGVLFGLVAWQYGWSWITLGGLILTAFLISLTFIDADTQYLPDSMTLP
                     LIWLGLIFNLDGGFVPLQSAVLGAVAGYGSIWLLCAVYKLIKGEIGMGNGDFKLIAAL
                     GAWLGISALPVLIFVSSLIGLVAAIVMRVAKGQHFAFGPALTVSGWIIFTANDSVWRA
                     VNWWLTHPVL"
     gene            72402..73034
                     /locus_tag="WIX18_000090"
     CDS             72402..73034
                     /locus_tag="WIX18_000090"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HEZ5237264.1"
                     /translation="MTVWVGLTGGIGSGKSAAAQCFADLGVPRIDADAAAHSLTASDG
                     IALPEIRRLFGDTVFDTQGLLRRDILRKEVFASPSRKALLESVMLPLIFSEIKKQQET
                     FTDAVYGIVEIPLLTEKRQFVSLIRRVLTISAPLEKRIGRVMARSGLTRGEVADIISH
                     QASESERLLLADDVLLNDGSLKSLCEKTMRLHAFYSGIFASKPTQGKHND"
     gene            73027..73236
                     /locus_tag="WIX18_000091"
     CDS             73027..73236
                     /locus_tag="WIX18_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HEZ5237265.1"
                     /translation="MTESRQTRLQVKCPTCQTAVVWKPENAFRPFCSQRCKLIDLGGW
                     ADGKYTVSSQTESLPEISEPDMAYR"
     gene            complement(73321..74997)
                     /gene="pilB"
                     /locus_tag="WIX18_000092"
     CDS             complement(73321..74997)
                     /gene="pilB"
                     /locus_tag="WIX18_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV-A pilus assembly ATPase PilB"
                     /protein_id="HEZ5237266.1"
                     /translation="MSVGLLRILVQNQVVTVEQAEHYYNESQAGKEVLPMLFSDGVIS
                     PKSLAALIARVFSYSILDLRHYPRHRVLMGVLTEEQMVEFHCVPVFRRGDKVFFAVSD
                     PTQMPQIQKTVSAAGIEVELVIVEDDQLAGLLDWVGSRSTSLLQELGEGQEEEESHTL
                     YIDNEEAEDGPVPRFIHKTLSDALRSGASDIHFEFYEHNARIRFRVDGQLREVVQPPI
                     AVRGQLASRIKVMSRLDISEKRIPQDGRMQLTFQKGGKPVDFRVSTLPTLFGEKVVMR
                     ILNSDAASLNIDQLGFEPFQKKLLLEAIHRPYGMVLVTGPTGSGKTVSLYTCLNILNT
                     ESVNIATAEDPAEINLPGINQVNVNDKQGLTFAAALKSFLRQDPDIIMVGEIRDLETA
                     DIAIKAAQTGHMVFSTLHTNNAPATLSRMLNMGVAPFNIASSVSLIMAQRLLRRLCSS
                     CKQEVERPSASALKEVGFTDEDLAKDWKLYRAVGCDRCRGQGYKGRAGVYEVMPISEE
                     MQRVIMNNGTEVDILDVAYKEGMVDLRRAGILKVMQGITSLEEVTANTND"
BASE COUNT        18004 a        19210 c        20238 g        17585 t
ORIGIN      
        1 gtcttttcat tcacaggttc acatgaggtc atagtaaaaa cactcccaat aaacaaaata
       61 aaaagttgat aaatggtagt agcatatggt ctcataattt caagcctaga aattagttaa
      121 agaatatatt atggtagata ctaactcttt aagttgacat attgtgtgat atcgagggct
      181 gtaccgtatt ttcccatcgt attttcccat cgtattttcc catcgtattt tcccatcgta
      241 ttttcccatc gtattttccc gttctttata tgagcggcag gcatcctcat aaaagaaggg
      301 ataccgataa ggaaaaatac cccagcataa aaaatatact gattaatcaa tacaaatcca
      361 acaaacagtt catcgtattc ttttctgttg gcgtataaaa atactgatat attccttcac
      421 tttcataggg cgacgcttta tgtaccgtcc tgtgtgttga aacgtcggtt ttccttaccg
      481 cctgccccgc ttttccctga ttgctgccaa ctgccgtccg aacttgaacc gtcaggtttc
      541 agacggcatt ttttctgcct gctcccacaa ttgccgtttt tgtgcggcgg tcagtttttt
      601 gacggcgatt tcctgcctga gtgccgtgcc tttatccatc ccgcctgcaa cgatacgcat
      661 cgccaccggt ttgaatacgc gggtatattt cgcgccttta ccggttgtgt gggcggcaag
      721 ccgctgttgc ggattcgggc tgatgccgca atagaacgcg ctgttttcac acaatatcag
      781 gtaaacgctc cagtttgacg cgttcatctg cctgcatcct gagttttctc cccgttccaa
      841 ggcgcaactt tcagcagcag cagcataccc ggtagggcga gtgcgaaaca cagttggaaa
      901 aacggtacat aaccgagcca ttcaatcaga taaccggcaa aggaattgat gaccgtgcgc
      961 gggacggcgg acaggctggt aaacagcgca agctgcgttg cggtaaatgc gggattggtc
     1021 tcgcgcgcca tatacgatac gaacgccgcc gtccccaaac ccacgccgac tgcctctgcg
     1081 ccgataactg ccgccagcat cagcctctcg cctgtgccga ccgtgtcgaa atgtccgaac
     1141 cctgccagcc atacaaaccc caaaacggtt acagcctgca ccgcgccaaa tagccacaag
     1201 gctttgttta cgccgatttt cagcatccac acgccgccca agatacctgc cgccactgcc
     1261 ggccacagtc ctgcattttt cgcaatcaaa ccgatgtctg tcttgctgaa acccatatcc
     1321 agataaaacg gcgttgccaa cgcggttgcc atactgtcgc cgagtttgta aaggaagata
     1381 aacagcagca cgcacaccgc cgaagcgatg cccttgcgcg taaaaaattc tttaaacggc
     1441 tctaccacgg tctgcttcaa cgttttagga acggcaggcg gcaacacggg ttcgcgcgca
     1501 agaaacagcg tcatcagaag gccgggcagc ataaataatg aagtgataac aaatacttct
     1561 gaccacggca tcctgtctgc caacaccaaa ctcaatgaac cgggaatcag ggcggcaatc
     1621 cggtaggcgt tcacatgaac cgagttgccc aaacccaatt cctcgtccga caaaatctcg
     1681 cgcctgaacg catccaatac aatatcctga ctggcggaaa aaaaagcgac aagcaccgac
     1741 aagccggcaa tcagcggcag atgattacgg gggtttaaaa aggcataggc cgccaaagcc
     1801 gccagcaacc ctgcctgcgt cagcagcatc cacccgcgcc gccgtcccaa aacgggcagc
     1861 ctgaccgcgt ccatcagcgg cgaccacaaa aatttccaag taaacggcag accgattaac
     1921 gccatcagcc cgatgctctt caaatccacc tgctcgctgc gcaaccacgc cggaatcagg
     1981 ttaatcagaa agtacagcgg cagccccgag gtaaaccccg taaaaataca gacaagcata
     2041 tttcgggaaa agatttgccc gataaaacct gatttcgatg cagtcatcgt tcgtgcagcc
     2101 caaaaaaaac aaaagcctat tgtagcaaat atcgcccgcc tgctgaaaaa tgccgccccg
     2161 cgccgccggt ttgccgttca aatgcaaaat gccgtctgaa actgtgttca gacggcattg
     2221 cttttctgaa aaccagacgt gcttacaggc tgtaatacat ttcaaattcc agcgggtgcg
     2281 gcgccatgcg gatgcggcgt acgtcttctt ctttgaaagc gatgtagctg tcgatccagt
     2341 ctttgctgaa cacgccgccg cgcaggagga attcgtggtc ggctttgagg gcggccagtg
     2401 cttcttccaa agaagcgcaa acggtcggca ccaatgcatc ttcttccggc ggcagatcgt
     2461 acaggttttt atcggcaggg tcgcccggat ggattttgtt ttgaatgccg tccaaacccg
     2521 ccatcaacag ggcggcaaat gccaaatacg ggttggcggt cggatcgggg aaacgcgctt
     2581 cgatgcggcg cgccttgctg ctgttcacgg acggaatgcg gatggaagcg gaacggtttt
     2641 tggcggagta tgccagtttg gtcggcgctt caaagtgcgg cacgaggcgt ttgtaggagt
     2701 tggtggacgg attggtaatc gcgttcaagg ctttggcgtg tttgatgatg ccgccgatgt
     2761 agtagagcgc ggtgtcgctc aagccggcat agccgtcgcc tgcgaacagg ttttgaccgt
     2821 ctttccaaat ggattggtga acgtgcatac cgctgccgtt gtcgcccata atcggtttgg
     2881 gcataaaggt ggctgttttg ccgaagttgt gggcaacgtt ttgaatcaca tatttcatgt
     2941 cttgggtttg gtcggcgcgt ttgaccaagg tggcgaaacg cgtgccgatt tccatttggc
     3001 tgccagtacc gacttcactg tggtggactt cgacttcgat gccgagttct tccaaaatgt
     3061 ttaccatcgc ggagcgcagg tcttgtcccg cgtcaatcgg agcaacgggc gcgtaaccgc
     3121 ctttgacggc agggcggtgg ccggtgtttt gaccgtccat atgcagaccg cttgcccacg
     3181 cgccgctttc ggacgtgatt tcgtaacggg ttttgtgcat atcggtttca aattctatgc
     3241 cgtcgaatac gaaaaactcg ggttcgggac cgaaataggc ggtgtcgccg atgccggaag
     3301 atttcaaata ggcttcggct cggcgggcga tggagcgcgg gtcgcggtcg taaccctgac
     3361 cgtcggcggg atcgataacg tcgcaagtca acacaacagt cgcatcatca taaaaaggat
     3421 cgacgaaggc tgtagacgca tcggggcgca actgcatatc ggaagcctga atgcctttcc
     3481 agccgccgat agacgaaccg tcaaacgcct gaccgttttc aaaccactct tcggggtctt
     3541 ccaacacgat gcgcgcaggc acggtaaagt ggtgctgctt gcctttggta tcggtaaagc
     3601 gcaaatcgac aaagcgggct tcgctttctt caatcaattt tacggcgttt ttaatagaca
     3661 tttttcagct cctggaaaag ggaaatagca aaatatgcgg aacgcggcgg cttgacacaa
     3721 agtcggcatg attctaccac gtccatgccg tctgaaactc gccctgcgtc aaatttcaag
     3781 ctggaaaata tagtttcaga cggcaagatt gtcaacaata tggataaaat tgcatatcat
     3841 gtccggattt ctccccagct tatacaggga aaaaccgtac cgcctgacaa ccgtttcaga
     3901 cggcatcgtt tccatctgta cgccgccgtt ataaaatagc cttcccgtct tttggaacac
     3961 gaccatgacc gccctccccc gttactccgt tttcggcaac cccgttgcac acagtaaatc
     4021 tccgcagatt catcggcaat ttgcccttca ggaaggcgtt gacatcgaat acggacgcat
     4081 ttgcgccgac atcggcggtt tcgctcaggc ggtttcgaca ttttttgaaa caggcggttg
     4141 cggggcaaac gttaccgtac cgttcaaaca ggaagcgttt catctggcgg acgaacattc
     4201 cgaccgcgct ttggcagcag gtgcggtcaa tacgctgatt ctgttgaaaa acggcaagct
     4261 gcgcggcgac aatactgacg gtatcggttt ggccaacgac atcacgcagg ttaaaaacat
     4321 tgccatcgag ggcaaaacta ttttactttt gggcgcgggc ggtgcggtgc gcggcgtgat
     4381 tcctgttttg aaagaacacc gtcctgcccg tatcgtcatt gccaaccgta cccatgccaa
     4441 agccgaggaa ttggcgcagc ttttcggcat tgaagccgtc ccgatggcgg atgtgaacgg
     4501 cggttttgat atcatcatca acggcacatc cggcggtttg agcggtcagc ttccggccgt
     4561 caatcctgaa attttccgcg actgccgcct tgcctacgat atggtgtacg gcgaagcggc
     4621 aaaaccgttt ttggattttg cccggcaatc gggcgcgaaa caaaccgccg acggactggg
     4681 tatgctggtc ggtcaggcgg cggcttccta cgccctctgg cgcggattta cgcccaatat
     4741 ccgccctgtt atcgaataca tgaaagccat gtaatatgtt ccgcatcgtc aaatggctga
     4801 ttgccctgcc cgtcggcatc tttatctttt tcaatgccta tgtgtacggc aacatcatca
     4861 cctaccgcgc cgtcgcgccg catcggactg cctttatgtc gatgcggatg aagcagtttg
     4921 aacaggaagg tcgcgatgtc gcactggatt accgctgggt accctacaac cgcatctcgg
     4981 tcaacctgaa aaaagccctg attgcttccg aagatgcccg tttcgccgga cacggcggct
     5041 tcgattgggg cggcattcaa aacgccatca ggcgcaaccg gaacagcggc aaagtgaagg
     5101 cgggcggttc gaccatcagc cagcagcttg ccaaaaacct gtttttaaac gaaagccgca
     5161 gctatatccg caaaggcgaa gaagcggcga ttaccgcgat gatggaagct gttaccgaca
     5221 aagacaggat ttttgaactg tatttaaact caatcgagtg gcactacggt attttcggcg
     5281 cggaagccgc gtcccggtat ttttatcaaa tacccgccgc caaactgagc aaacagcagg
     5341 cggcgaaact gacggcgcgc gtccccgccc cgctctacta cgccgaccat ccgaaaagca
     5401 aacggctgcg caacaaaacc aatatcgtgc tcagacgcat gggttcggca gaattgcctg
     5461 aaagcgatac ggactgagtg ccgccgcaat ataaaatgcc gtctgaaata tcattcagac
     5521 ggcatatgct ttctgccttt accctcttct ccaaaacgca acggggcggt cattatcatt
     5581 tttgcccttc tacataacgg tcagacacaa aacgtgtctg acacggacaa cttcccaaaa
     5641 acggcaggca aaaaaaataa ccgcttcaag gcggtttttt ggtggccaga ggcggaatcg
     5701 aaccgccgac acacggattt tcaatccgtt gctctaccaa ctgagctatc tagcctttgt
     5761 ctgtctcgtt aagagatgcg tattaaacca aattacggga cgacatgcaa gcatatcggg
     5821 caatattctt tgaaaacagg tttaagtcaa tgttttaaat ttgaattaat ttatgtaaaa
     5881 acaacataaa tccgtatttt tgccgcctgc ccgacgagat taggccaccc gtctgaaaaa
     5941 tattttcaat atttgaagtt ctcacccaga taaacagaac gaacctgttc gtttccgacc
     6001 aaatcatcag gttttcccga tgccaacacc gtgccgtctg aaataatgta ggcccgatcg
     6061 cagatgctga gggtttcgcg tacgttgtgg tcggtaatca atacgccgat accgcgcgac
     6121 ttgagaaatc cgatgatttt ctggatgtcg atgacggcga tgggatcgac gccggcaaaa
     6181 ggctcgtcca acaaaataaa atgcggtttc atggcgagta cgcgggcgat ttcgacgcgt
     6241 cggcgttcgc cgcctgacaa agatggggca ggattattgc gcaaacgctc gatattcagg
     6301 tcggcaagca gtttttcgat ttccctgtcg atttgatttt tatctttggt tctgatttcc
     6361 aagatggcgc ggatgttttg ttcgacggtc attttacgga aaatagaggc ttcctgcggt
     6421 aggtagccga cacccaggcg ggcgcgttcg tgtatgggca ggtgacgcaa ttcctgcccg
     6481 tccagcatca cgctgcccgc atcggcggca atgagtccga ctatcatgta gaagctggtg
     6541 gttttacccg caccgttggg cccgagcagt ccgatgactt cgccgctttc gatttcgagg
     6601 gagaagcttt taacgacttg gcgtttttta aaactttttt gcaggttttg aacaacaagg
     6661 cggctgacgt ttgcgctcat aaatatctct tcaatatctt cggtcggcat atgccgtccg
     6721 aaccaggttt atgtttcaga cggcattttg ggattattcg gatttttgcg tactcgaagg
     6781 ctggataacg acgctgaccc tgccggattt ggaagcggat tttgcgccgg attttgtgct
     6841 gccgctgatg gtatagactt cggttttggt gttgtatgta atcaccgcac cttcggcgac
     6901 atcgccgccg cgctgtactt tggcattacc ggttaagact acggtgctgc ctgcagatga
     6961 ataagcaacg ttgtttgcct gtccgcgcac cgtgcctttg ccgccgtcca atgtctggct
     7021 gaagcggact ggcgaacctt ccgccctcac ggattcgccg cctttgccgc cgcgtgtaac
     7081 attgacgcgg gcggcggaaa tattgagcgt accctgtctg atgacgacgt ttccgctgaa
     7141 tgtggtgctt tggttggctt gatcgagcga accttggtcg gcctcaatct gaataggctg
     7201 cctgctgtcg ctttgaaggg caaaagcggg ggacgccgaa aaaaatgcta ttaaaacaaa
     7261 tagcttacat atcttttgta tcataaatcg tggctttcac tttagatgag aagttcaaca
     7321 tgcctgtttt gtggtcgtaa gtcatgccgc ccgcctgacc gtgcgatgca ccatattgga
     7381 aactgacagg cgtatcggtt tgggcatatt gagattcggt atcgacgtgc agcttttcgg
     7441 cttcaacttt acccgcctgc cgtttgccgt cggcggtttt ggtcagcaca acgttgtttt
     7501 taaaaagaac ctgtttgttt tcggtatggt aaacggcttc atcgctgccg acttcgtaca
     7561 acaacctgcc ttcttggaag aacacgagat gcggtgagtc gaaatgaatg tcgctgcttt
     7621 cgggaaactg tttcgcgccc ttcgaactca aatgttcttt taagtatccc tgttcgtcaa
     7681 accgcctgcc atccaagccg tccattgtgt attgcggttc gtcgggattg agcctgactt
     7741 cttcaatctc gacttcgctg atgcgtccca accatgccga cagaccgccc aaggcaaccg
     7801 ccaatatcaa tgggaacgca attccgtacc gccatcttat tttcatttga tgtactcgtt
     7861 caaagccgcg cccaaagtcc cttgcgcctg cataatcagg tcgcacactt cgcgcaccgc
     7921 gcccgcaccg ccggggcgtt tggcaatata ggcggcgtgt tgcagcgtaa accaatgcgc
     7981 gtcgggaacg gcaaccggca atccgcaacg caccatcacc ggcaaatcga ccacgtcgtc
     8041 gccgacaaag gcacactcgg cttcttccac gccgacctga gcgcgcagct cttcatacgc
     8101 ggcgcgtttg tccgaaatgc ctttgaagta gtaatttatg cccaactgtt tgacgcggat
     8161 gccgacggag ggcgcgtccc gacctgtgat aatcgcagtc tgcacgccgc ttgcctgaag
     8221 cattttcaga ccgtgtccgt ccagtgtgtg aaacgatttg atttcttcgc cgttatcgcg
     8281 gataaagatg cgcccgtcgg tcaaaacgcc gtccacatcc aggatcaaca gtttgatttt
     8341 ggcggcgcgc gcctgtaatt cgggagaaat tgcctgcatg ggatttcctt gttttcagac
     8401 ggcatatctt accacaaatg ccgtctgaaa cggctgcaac gccttataca atccgtgccg
     8461 ccagcaggtc gtgcatattc agcgcgccga tcagcacgcc atctgcatcg gtaaccagaa
     8521 gcccgttcac atggtttgcc tgcatgactt tcagggcttc ggtggcgaga cgttcggcgg
     8581 agatggtttt aggatgcgta tgcatgactt cgtctatcga aagaccggta aaattgtcgc
     8641 attcttgaaa caggcggcgc aaatcgccgt cggtgaatac gcctttcaga cggccttgcc
     8701 cgtccgttac cgccaacatg cccagccctt tttcactcat gctgacgatg gcttctttca
     8761 agggcgtgcc gagtcggacg gcaggcaggc cgccgccttt gtgcataatg tcggcaacgc
     8821 gcaaaagtag gcgtttgccg aggctgccgg caggatggct caaggcgaaa tcgtcgggcg
     8881 tgaacgcgcg tgcgcgcagc aggacgaccg ccaacgcatc gcccaaagcc atgacggcgg
     8941 tggtgctggt ggtcggggca agccccagcg ggcaggcttc tttggaaacc gacgccgtga
     9001 tgtggatgtc ggcatggcgc gccatggttg aatcggggcg ggcggtgatg cagacaagcg
     9061 tgatgtcttt gcgtttgagc gcggggatga tggcggcgat ttcgtcgctt tcgccggaat
     9121 tggaaatcgc gacgaccacg tcgttgtcca caatcatgcc caaatcgccg tgtgccgctt
     9181 ccgcagggtg gacgaaaaac gcgggcgtgc cggtcgaggc catggttgcc gccattttgc
     9241 gcccgatatg tcccgacttg cccatgcccg tgataacaac cctgcccttg cagtgcaaca
     9301 acgcgtctgc cgcaaggacg aagttttcgt ccaattccgc tgcaatttcg cgcaagcctt
     9361 ccgcttcggt gtgcaacact tcgcgcgccc agtcgagata ttttccgttt tctgccattg
     9421 ccatccgcct ttgctgtaac aaaactaccc aaaatttccg aatcggggta gcataagcat
     9481 tcaaaccccg ccatccatcc aaaggaatca gaaatgacta ttttatcgga cgttaaagca
     9541 ttaggacaac aaatctggct ggacaacctt tcccgctcgc tcgtgcaaag cggcgaattg
     9601 gcgcaaatgc tgaaacaagg cgtgtgcggc gtaacttcca atcccgccat cttccaaaaa
     9661 gccttcgccg gcgacgcgct ttacgccgat gaaatcgccg ccctcaagca gcaaaacctc
     9721 agccccaaac aacgctacga aaccatggcg gttgccgatg tgcgtgccgc ctgcggcgtt
     9781 tgccttgccg aacacgaatc caccggcggc aaaaccggtt tcgtcagcct cgaagtttcg
     9841 cccgaattgt ccaaagacgc gcaaggcacg gtagaagaag cgcgccgcct ctacgccgcc
     9901 atcgggtgca aaaacgcgat gattaaagtg cctgccaccg acgcaggcat cgatgcgctc
     9961 gaaatcctcg tttcagacgg catcagcgta aacctcacgc tgctgttctc acgcgcccaa
    10021 accctcaaag cctacgccgc ctacgcgcgc ggcattgcca aacgcttggc agccggacaa
    10081 agcgttgccc atatccacgt cgtcgccagc ttcttcatct cccgtgtgga cggcgcgctg
    10141 gacacaacgc tgcccgacca cctcaaaggc aaaatcgcca tcgcccttgc caaagccgcc
    10201 tatcaagatt gggaacaata tttcaccacc cccgaatttg ccgcactgga agcccaaggc
    10261 gcaaaccgcg tgcagctttt atgggcatct accggcgtga aaaacccagc ctatcccgac
    10321 acgctctacg ttgacaacct gatcggcgcg cacaccgtca acaccgttcc cgatgccacg
    10381 ctcaaagcct ttatcgacca cggcacagcc aaagccacgc tgaccgaagg cgtagaagaa
    10441 gcacaagcgc agcttgccga aaccgccgcg ctcggcatag acgtagaaac cctcgccaac
    10501 cgcttgcagg aagacggttt gaaacaattt gaagaagcgt ttgaaaaact gctcgcaccg
    10561 ttggtttaaa cttttcatcc ccgatgccgt ctgaaaggct ttcagacggc atcgcccttt
    10621 tgaccggaca cagtgcggca tatcaaggat tcgccctaaa aatattaatc aacaagaagt
    10681 taatgcacga cattacccac taacacaaaa ggaaatagaa tcatggcaaa agcactcgaa
    10741 atcatttcac ccaatgaaat ttattcagat ctgattttta aggatccggt acctccccat
    10801 actatatata gagaattgat gaaactggtt agtagaaatg caagtaatga gagaatcgca
    10861 gatagagcct tcgatttttt ctcgtccggc cttatggatg gttcagctac cgaagagcaa
    10921 tataatgccc tatatgattt aaccttgctt gaagagcccg ggatggaact gaataaagat
    10981 gagataatgg ctttgattaa tagtcttaaa taaaggggct gtaccagata tgtacacagg
    11041 acgttttgcc cccagcccga ccgggctgct ccacatcggc tcgctgctga ccgccgtcgc
    11101 ttcctatgcc gatgcacgct caaacggcgg caaatggctg gtccgcatgg aagacctcga
    11161 tccgccgcgc gaaatgccgg gggcggcaag ccatatcctg cacacgcttg aggcattcgg
    11221 attcgagtgg gacggagaag tcgcctatca gagccgccgt tacgccctgt atgaagaaac
    11281 actatgccgc ctgaaaaccg ccggactggt ctatccctgc cattgcagcc gcaaagactg
    11341 gcagaccggg gcaaggcggg gcgcagacgg gttcgtctat aacggacgct gccgcaatcc
    11401 gcagcaacgc cctgcactgc aaggcaaaca gccggcgtgg cgcatccgcg tccccgaccg
    11461 cgacatcggc ttttcagacg gcatcgtcgg cggttacgcc caaaacctcg cccgcgacat
    11521 cggcgatttc gtcctgcttc gtgcagacgg ttactgggca taccaactcg ccgtcgttgc
    11581 cgacgatgcc gaacagggcg ttacccacat cgtccgcgga caagacctgc ttgtttctac
    11641 gccgcgccaa atctatttgc agcagtgttt ggacgttccg acaccgcaat atgcccacct
    11701 gccgctgctg accaacgcac aagggcagaa atggtcgaaa cagacgctcg cacccgcatt
    11761 ggatttaaac cgccgcgaac aactcctccg ccaagtgttc cgttacctca acctgcccga
    11821 agcaccggaa gccgaccgcc ctgccgaact gctcgactgg gcggtggcac actgggatat
    11881 gggcaaagtg ccgaaacacg ccattaccgc cccctaaaca ccgcccgaca aacgcacaaa
    11941 tgccgtctga aaccttcaga cggcatttca tacacacagc cccgccctat tcgcgcatat
    12001 ttgcccgttc gacttctttc cacgcttcga gaatcaggcc gccgtcgttg tctttcaaga
    12061 gcgttgcatc ggaaagcata cgccgccaag tgcgggcatt tttcagaccg tgcatcagcc
    12121 cgaggctgtg gcggacgatg tggcgcaaga ttgtgccgcg tccggcttgg atttgggctt
    12181 gactgtatgt gtagagacgc tgcaccaaat cggcgtattc aatcgggctg cgggtatcgc
    12241 cgtaaaacag cctgtcccat tcgcgcatca ccatcgggtt gtggtacgcc tcgcgcccga
    12301 ccatcacgcc gtcaacgtgt tgcaggtgtt gcgcgatttc ctcattggtc gtgatgccgc
    12361 cgttgatgat gatttccagc ccgggaaact cttgcttgag gcggtaaaca taatcgtatt
    12421 tcaagggcgg aacgtcgcgg ttttctttgg gtgaaagacc gtccagccac gcgttacgtg
    12481 cgtggacgat aaaggttttg caggcggttt tgtcgcgcag cgtgccgacg aaatcggcaa
    12541 cggtttggta ttcggtctgc ctgtccacac cgatgcggtg tttgacggta acgggaatct
    12601 tgaccgcatc ctgcatggcg ttgaggcagt cggcaaccag cccgacttcg ttcatcagac
    12661 acgcgccgaa cgcgcctttc tggacgcgcg gactggggca gccgcagttg aggttgacct
    12721 cgttgtagcc gtattcttcg gcggctttgg cggctttcgc caaatcggac gggtcgctgc
    12781 cgcccagttg cagggcgacg ggctgctcgc cttcgttaaa catcaaaaag cggtctttgt
    12841 cgccgtaaac aatcgcgccg gcgttgacca tttcgctgta cagccaagta ttgcgggtaa
    12901 tctggcgcgc catataacgg tagtgcctgt ccgtccagtc caacatcggg gcgacgcata
    12961 aacgcctttt ccctttatgt tcaataagtt ccttgtttat cataaggttt tcacattctt
    13021 ttaactcaaa cattctttat tatttgcttg gatttttgct cattttgcta tatttgatgt
    13081 accattcttg caccataatt tttaattctt gggaatggtg caaatggcaa caataaccaa
    13141 gcggcgcaat ccttccggcg aaacagtata tcgggttcag gtacgggtca gcaagaaagg
    13201 ctaccctgct ttcaatgaga gcaggacgtt cagtaaaaag gctttggcgg tcgaatgggg
    13261 gaagaaacgg gaggcggaaa ttgaagccga cccagaactg cttttcaagc gcggcaaggt
    13321 caagatgatg acgctgtccg aagctatgcg gaagtatctt gatgaaacgc ttggagcggg
    13381 tcggtcaaag aaaatgggct tgcgttttct gatggagttc ccgattggcg gcatcggcat
    13441 cgataagctg aaacggtctg atttcgcgga acacgttatg cagaggcggc gcggaatccc
    13501 cgaactggac attgcaccaa tcgcggcttc tacggcattg caggagctgc aatatatccg
    13561 ttccgtgctg aaacacgcct tttatgtatg ggggcttgaa ataggctggc aggaactaga
    13621 tttcgctgtg aacgggctga aacgctcgaa tatggttgcg aaatctgcaa tcagggacag
    13681 attgccgact acagaggaac tgcaagccct gacaaattat ttcctgcggc aatggcaaag
    13741 caggaaatct tccataccga tgcacctgat tatgtggctg gcgatttata cgtcaaggcg
    13801 gcaggatgag atttgccgtc tgctgtttga cgactggcat aaaaatgatt gtgcctggct
    13861 ggttcgtgat ttgaaaaatc caaacggcag cgtcggaaat aataaagagt ttgatattct
    13921 gcctatggct ttgccggtca ttgacgggct gctggaggaa tcggtcagga agcgtatgct
    13981 tgccaacaaa ggcatcgccg acagccttgt gccgtgcaac ggaaaatcgg tttccgccgc
    14041 ttggacgagg gcgtgcaagg ttcttgggat taaagacttg cgcttccacg atttacggca
    14101 cgaggctgct acccgtatgg ctgaagacgg cttcacgatt cctcaaatgc aacgggtaac
    14161 gctgcatgac agttggaaca gcctgcagag atatgtgagc gtacgcaaac gctcgacgcg
    14221 gctggatttt aaaggggcaa tgatgcaggc gcaaagcgat ataaaatccg ggaagtgata
    14281 ttaaattaaa ggggatgcgg cgcatcccct gatttctccg tcttgcatca agactggaat
    14341 ttccgatatt ccgattttgc cttttcttcc ttgtctgcga ttgcctttgc aagctcttgg
    14401 acgctgacga aatattccga tttttggctg tcggacaatc ggaaaatcgg aaacggaagc
    14461 tcgcaccgta cccccgatgc tttaaacgcg ttaaagctga tatgggcaaa aaagtctttg
    14521 tgtacttccc tcagcgggat atacgggcgg ccgccgtatg cgattaaaag cccttgttct
    14581 ttactgatgt tcatatatac ctctttctgt tgattctgct ttgtctgagt ttctgctttt
    14641 ttacggcttg tcggatgttc agcctgcggc ggtgcataag tcctcctgtt cgggtggttg
    14701 ttcagccgat tgcctctccg aaaagtggca ggctgcaagg gaagtagtgt ttttgtccgt
    14761 atttctctgc ctgtatcagg ttgcacaggc ggtcgcaaaa gccgtcaaat tgtgcttgat
    14821 gccgtgcttg aagccttttg tgctggaatc gtgatatatg caggttcgga tgtgtgttgt
    14881 catgccgctg cttcctggtg catgaggcta atcagatttg ctgcccgttt gaaatgtttc
    14941 gtccaattaa agcagctaaa gccggtgccg ttgtcgcaat gccggatgat gtcttccgag
    15001 tccttgacgg cttgaaccaa tgcgccgcct ttgttggatg caagcatttt catcatcggc
    15061 tggcgcacat cgcttattcg ttggggacgc acgggattca gcggcttgcc gtacatcgcc
    15121 gaaagctcct tgtccgcttg aatgcccaca tcgtaaagca ggtttgcggc gtgtaggatt
    15181 cggtctgtaa attccgcgta tggcatttta aggcggcggg cttctgcacg tgaatccgcg
    15241 ccgctgatga ctttgtcaat tgccgaaatc aaaccgccat caagttctaa aaacgtcatg
    15301 gctttcttgg caactcggac ggccaatgag tatgtcgata cttcggcgat tagtcgtgct
    15361 ggcgcgtctt tcaaaaacgc ttcatacgcg gcgaacagat tttgcaatgg acgcaacacg
    15421 atttgacgct gattcgggct aaggtcgtca aaatctttag tccattttgc gacagcctgc
    15481 gatgcttcgc gacaggcaaa cgccacgctt ttctcgttcg cagggtcgtc agtgttgcag
    15541 tacaagccca agcgttgcac ctgtttgatg atatgctcgg ctaagttgat taattcctga
    15601 ttgcaggcat agcgcatatc ttgcagggac agccacatca taatgctgca cgtcagggct
    15661 ttgtcttctg atactttctc gcctgacaac atctcggcga tgttttcttt ttgcgctttt
    15721 gatgaggcgg acaggcggtt tcggtcaacg tttttgactg ttcccgcgcg tttcagggcg
    15781 cgttcttgct gcgttgattt cttcgccgcc cgcttggcgg caagcatctg ttttgccgtc
    15841 ggtcttgttg ctgctgtttg catttttgct tccttttaaa actgttttga caggcttcca
    15901 aacggtcttc ccgttcactt cctgcacctg tctgattcct acgatgtgga tgtcgggatt
    15961 accagccgat agcctgacaa actcttcggc ggtctctatg gttgaatatt cagggctgat
    16021 ttggtagcgg ctgttgctta gccgcttcca tttgcgccgg tcttcgtacc acgtcgaatc
    16081 atctttgttg taaacaagcc gccgccgttt ttcttcttcg ggacggcatt ttccaaagac
    16141 tgcgaacatg gcgactcctt acagcgcgtt gatttccgcc gcctgctctt cggtgagcgc
    16201 gtacgcttcc aagacttcgg caacttcttt catacctgtt gatattgctt caaccaatgc
    16261 cgcgaactgt tcttcggttg gcgcgggctt ggctgtttct acggtttcgg cttcgatggt
    16321 gtttgccgcg atttgtttaa accgttcgtg attctcgctg cccagcttca gacggcctgc
    16381 cgcgccgatt tctgaaaacc attttttgta tgcttccatg cctttgtttg ccgccgcctc
    16441 cccattagaa atcaggctgt ctaactcagg gtcagctttt gcctctttgg gcgtttcggt
    16501 tgtttggata cgctgtgcct cgtcctcgtc gtagatgccg ccgaaaccga acgctaaccg
    16561 tgcggcttga atcatggctt tgtgacggag catacggcgc gggtggctgt tccaaggttg
    16621 tgtattgcgt ttacactctt ccagatactc ggtcacggtt atcggatggt tgcggtcttt
    16681 gcggtagatt ttgcaggtgc agctttctgc gtcggcggca aaatccatgc cgtcgaattg
    16741 aggatggctg ttgatgattc ttgcccagcc gtccacgccc acgacaggcg tgataccgtt
    16801 gtttttatcg ggaaacgcgt aaatctccct ggtaaacggg ttcaagccgt attgcgtcga
    16861 tacaatcatc agggcgttga attgcgcgtc tgtcgcattg cctttaaagg cggttgcctt
    16921 aagcgtctga accagctctt gcgggtcgcc ttggatgttg aactgtttgg ctagggctac
    16981 tgcttgattt tgggcgatac tcatttttaa attccttatc tgtattggtt taaaagcgtt
    17041 tcgtaatagg tttggcaagc tgctacacgc tctttgatta gttcgatttt ttcgtcatcg
    17101 cgcatgacgg ttacggtcgt gatgcgcttt tcaatcggga tggcttccac aagctcgatg
    17161 tatttctcac ggtcttccca ctgtttcagc aaatcttcag gcgtgggcaa cagccaaaaa
    17221 tcaatatcgg cgcggtcgca atcaaacagc cacatatagc cttgcatttg ccagtcgtaa
    17281 ccggctttgg cggctttctt ttccgcttct tcgcggaaaa acggatgcgt gccgatgtcc
    17341 catgaacact ttgtgtcaac aatcaggcgg ttgtcggaat cgtaaacatc gcattccccc
    17401 gtcagccagt cgttgacgcg ccgctcgatg tttttcttgt actccctgcc gcgaaccaaa
    17461 ccgctgtatt tgatggcggt ttcttccatc agatcgccct tttcggtaaa ggcgttgccc
    17521 tcgaaagcct cgaagccgaa caattcgcgc ttcgccattt caatcagttt cgatttggcg
    17581 gtttccgtaa tggcttcgcc tttggttttt ggcttgccga tgatgtcggc aatagatgaa
    17641 catcggattc tcattcttta ccctccggca cttccgcatc gccgtgcacc catcggtaat
    17701 cggcttcttc ttccgcattc agatgccgct cttccagcca aatctcggcg ctcaattccg
    17761 caacctgcgc ctgcttttgt gccaacgcca tacgcattgc cgcaatatcg gcggactttt
    17821 cctttgctgt atggcttttg cttcctttgg cgaatccgaa ggcatagccc gccgccaata
    17881 ccgccgccaa taccgccagc aataccgcca acttaaatac aatattccct gctttcattt
    17941 ctatttcctt aatttaaaag gttttaattg cgcaccgcgc ctgccaagga tggggcagac
    18001 cgtgcgctgt cggggttatt tgcggctaaa atctacaaaa accgccgccg cgcccactcg
    18061 ccgactaacg gcgcggcatt cctatgtccg ctatgaattt gccagcctgc cgatgttctc
    18121 cgtcagcgtg aaccagtccc catcatctat cgcgtaattc atcgctgcct cggtatcttt
    18181 attgacacgg gaagcatctt ccgtgagata catttcccaa tcttcttggg cgtaaggctc
    18241 accgtccgca ttgtggataa attcacgtgc cgattttttg gcaatctcaa tcaaatcaga
    18301 ttcgtgcagg attcggtttt ccacctccca atcgtcccaa gcctgccgcc tatcctcccg
    18361 tgcgtaatat ccgcccatcc cccaatcggg gcagctgtaa ccgataatgc ccatttactt
    18421 catcctttcc gcttgagaaa accgcccgca gcattcactg tttcgccgtg ccgttgcccc
    18481 gctttgaagt gccatacttc atcgctttgt gctatctccg tcttggcaga tatagcttcg
    18541 ggcggtttta aggtttagcc gttgccgctg ccgttgctgt agccgccgcc accaccgccg
    18601 tcgctgccgc tgccgttgcc tttgcctttg ccgctgccgc tgccgtagcc gttgccgctg
    18661 ccgttgctgt agccgttgcc gttgccgtag ccgctgccgc taccgccgcc gccgacgccg
    18721 ccgtagccgt tgccgtagcc atagccgtag ccgctaccgt tgccgctacc gttgccgttg
    18781 ccgctaccgt tgccgtagcc gtgcttcaat ggttgatcta gataactcat gactgggcga
    18841 cctccagcgc ggtgcggatt gattcagccg cgccgcctgt tactgggata atctcaatcg
    18901 cctcgagcca tacggaatca agctcgccgc aaatttggct gccgtcttgc ctgatgccgt
    18961 gtcgtgcgac acctgacagg ctgattgatt cctttgccca ccagctgtac attcggcgcg
    19021 cttttgtcag aatcacttca ttgcctgctt tttgtttcaa cacaccaaac caaacgcctg
    19081 ccgaataagt gcggatgatg acttccttgc cgatggcaaa gtcgttgata cctttttgct
    19141 cggcaactgt taccggcggt tgcggctcat gttgcggttc gtcaaattcg gttggaatgt
    19201 cggcgcgttt tacacccatt gccgcttcga aatcggcagc aatgcctgca aagactttta
    19261 taaggtctga caaactgttc acttcaaatt tatttgcttc catttttgtt tcctttcggg
    19321 gtggggttgg tttctttaca aaacaatcat taccttctct tttaagccgt cttttttcac
    19381 tgtaaaagta aaagcggtgt agctgatgct ttcgcttttt ctagtggtaa atgtcgctgc
    19441 tgcgtcgcgg cagatttcac cgactttcaa taaaaggctt tgctcgtcct tttccctcgc
    19501 gccaaaccga tttattttgc tgattaattc gttcatctcg tttccttcaa gttgttgttt
    19561 gtttcgatgg ggtgcagtat agcaaagcta aataataaat caatagcatc gctatattta
    19621 ttttgctata tttttgatta ttaagaattt atttttgaga tttcgcaggc acaaaaaaac
    19681 cgcccgatat ttcgggcggt ttttttacga acataaaaaa attataaagt caaggaagca
    19741 ccatattgac ttcctgaaat caccatgccg atttcctaac accggcgggc aagcctacat
    19801 gatgttcatt ttttgggtat taaaaaagcc cgcatcgcgc gggctgtgtt tttaaataac
    19861 aggcagatag caacatcggc aaccctgctc atgcgtgcag tgtgcgtgtg ggagaacggg
    19921 tgcgtctgat gatttgtata tcttgccgtc ctccgattta caaaattcac aaccatcggg
    19981 gcaacaagac agctcgactt cttcgtactc ttttaattcc tgacgcgatt gtgcgtggaa
    20041 aagcagcatt gcagggacgg cagaatcatc aagaggcgtt gatgcaaatt catgccggtg
    20101 aagccatttc gggaaatgac tcaatcccca aataaaattg aatgcagcca tgacgcgcgc
    20161 catttccata tcgccgccgc tgattccgtc cagtatttca ggggaatcta aaaggataga
    20221 tttcaagatt tcagcgtcct cattgcacgg gtagctctcc cagtattctt gagcggatat
    20281 tcccgaaaac gagccgcgtg gtcttggctt cgataattca taatttgcaa ccgtccgaca
    20341 cgctgccaat acgtcgtgtg attgaatgtg ttgaaagctc aatcgatatg cttcttctgt
    20401 tttaatatcc attagtctaa tacactccac caaaataccc taccaataac ggtcaggctg
    20461 tctaaagagg cggtttcgtc tttgtattcc gggttgtagc tcttgatacg gacttgatta
    20521 tcaggcagct tttgcaagat ttttgtacgt aacagcccac tgtggttgat ggcatagatt
    20581 ttgccgtctt taatcatttt atcggcagta ttaataccca gtgtagcccc gtcggggaat
    20641 accggctcca tactgtctcc gtcggcagat acgcagacaa catcgtcagg gcttatgccg
    20701 tgccgtctta aggttgattt tgagaaacgc agtttatagc cgttgtagtc ttcaatttca
    20761 tctgaaaagc cgttacccgc cgacaagcaa acgtctttat aaaatggaac ttcgcaatca
    20821 tcatcggata acggggtttt gctatcccaa gcgtcaacag tgccgataac ggtggcgttt
    20881 gatttgatgg aatcaatagg tatattcggc tcgtcttttc catccaccca tccgcgcggt
    20941 aatccaagcg cggtctcaat ttgagcggct acgccgtccc ctatatttct gtatccgtta
    21001 agccattgat ttatctgtgc aggagctttg ttaattgccc gagaaaactc agcttgattg
    21061 ccgttaaacc tgtcggctat cagattttta attctatcta cccggttcat ttcatcaccc
    21121 cttcaaatag gtataaatat aaagcatagc tacatttatc aatgctacta ttttatattt
    21181 agctatgcta tactaacgct aaattgattt gacagaggtt gaaatggatt taagagatta
    21241 ttgcgcgata cgcggaaatc agtctgattt ggcaagaaaa acaggaattt ccccgtcttt
    21301 tatacatcag attgccagag gattgaagcc catcccaatt cagtcggcga cgttgattga
    21361 aaagtcaaca aacggaaggg taacacgaaa agagatgttt cctgatacct ggcatctaat
    21421 ctggccggaa ttggcagacg accaacccaa ataaaaagcc cgtcggggat gacgggcagc
    21481 ctgttacgca ttattcgatt gttaaaaacg agatggaagt atgagcgcaa gactgatggg
    21541 aatggaagaa cggcaaatga aatatattcc aaattcgttt cagatagcaa acgcagtagt
    21601 ggacgattta ctctgcctta tgagcggcaa cgcgtggaaa tgctacggcg tcatcgtgcg
    21661 caaaacgacc ggctggcaaa aggagatgga ctacatttcc gtttcccaat ttaaaaccct
    21721 gaccggaatc aaaaaagacg aaacagttac cgacgcgcta aaagagcttg aggaattgaa
    21781 tctgattgcc tccgtcaaac agcgtgggaa agtaaccggc taccgcctca atatgcccga
    21841 actaccccct gaaaatgggg gtactaccac ccccaaaaat tgggtacacc cgaaaatggg
    21901 gactaccccc aaaaattggg gggtactacc cccggaaaat gggggtacta ccacccccga
    21961 aaaagggggg tctacaaaac acactataaa acccactaat acaaaataca gtattagcgc
    22021 atccgcagca gcggacgcgc cccttcctgc caaacattcc gaaagcggag aacgtgccgc
    22081 gacggtgaaa gccaaaccga ccaagcacga aaccgagctt tcgctgcttg ccgactacgg
    22141 catcgcgggg caggtggcgg cggacttcct gcaagtccga aaggcgaaac ggcagccgct
    22201 gacggaaacg gcgatgaagc tgcttgccgc cgatgcggag aaatgcggga tgacggcgtt
    22261 gcaggcggtg gagtacgcca tcggcaacgg ctgggccagc ttccgcgccg aatggctgca
    22321 aaacaaaact ttcggcgggt ctggaaaccg cggcggtctg acgcacaacc aaaccgccgc
    22381 cgtgctggat gcgagaagct acggcgatat gccgacaacg gatttttgag ggggcggata
    22441 tggctttgag gggcgcgtct gattttttga gggctttctg cagtgtgcag accgaacggc
    22501 ggcaatgcgc ggaacacggc gaatatgtgg cgaaaagcgt ttttcgcggc gtgtggacgg
    22561 gctgcccggt ctgccaggag ctggaagcgg cggacgaaat ggcggcatac gcggaaacgc
    22621 tgcgccgcga ggcgatgcgc aacgggctgg aaaaacgcat cgggcggtcg ggcatcgcac
    22681 agcggttcag aaactgccgg atcgaaaact acaccgtcag cgaatcgatc ccgggtatgg
    22741 cgagggcgaa agccgccgcc gccgaatacg cggaaaactt cgccgatgtt ttgcagacgg
    22801 ggcggaatat gattttttcg ggcaggaggg gtacgggcaa aaaccatctt gcctgcggca
    22861 tcgcccacga agtcatcgcc gccgggaaaa ccgcgctggt catcacggtg ggcgatatgc
    22921 tgcggacgat caaggacagt ttcggcggcg gcagcgagac ggaggcggtc ggaatttttg
    22981 tgaagcccga tttgctggtg ctggacgaat ttggcgcggg caatctgtcg gaaacggacg
    23041 ggcggatttt gttttcggtc atcaacgccc ggtatgagcg gctgatgccg atgctggtgc
    23101 tgaccaacct gacggcggaa gccttccgcg aaaacaccga cgcgcggatc agggacaggc
    23161 tgcgggacgg cggcggcaag ctgattccgt tcgactggga cagctaccgt gcgtgaaacc
    23221 tgcttccgct gcaagtacgc ggattttaaa acccaactgg acacgccgat gcgcggtttt
    23281 gcgaaatgcg cgaaggcgcg gaatgcagaa gaaaaagcga cctactaccc acggacaaaa
    23341 ccttgcgcga ccggggcgtt tcggacggca tcggaggcgg taatcgcaag acggtcggca
    23401 gtgcttggag aaaaccctct gcaatgcgcc aaatttgagc aggaaagcgg gtaaaacgac
    23461 ttgggaatac ctcacatacc cgagacttaa aaacgcgtta aaacgaaaat ttgaagaatg
    23521 gcgcaacaaa aggaaatgaa gaaatgagaa ttttagcttt atttgacgac gggaacggaa
    23581 gcgtaaaaaa ggcactgcct gaccatgatg tagtgtcggt agggattggg aacgccgata
    23641 ttgtgatgga tttgtcagac ttgaagaatg ttaaaaagct ggtcgatatg cacaaaaaag
    23701 agccattcga tttattgatg gcaagtccgc cgtgcgaatc ttggagcttc tcaaccgcag
    23761 gcgataacgg aaacgcgtat cgagataaag acagcctgtc attacgaact ttccaaaact
    23821 ggaaaaaaac ccgtatgtgt caatccgtag attggttgag cgtaacgcac ctgaaattcc
    23881 tgctgtttat tccagatatt tgagaaaggg cgtgaacggc gatttaacag cgttgttcac
    23941 ggctgaattg gtcaaggctt tgggcatccc ttttgttatc gagaatcctc aatcatcaat
    24001 gatttttgac aagttggcgc gcgagggatt gagttttgtt aagaacgtag cctgctatgc
    24061 cgcatatagc gatgctttcc cgcttaaaag aactggcttt gcttcaagtt tggcgatgaa
    24121 tttaaaacag gtaaaacgcg cgaaatttgc atttcacgca tggaaaggaa gccatcatat
    24181 cgtgcggtca tccatccctg aagatttaat aaaacacatt gtcagtcact tttaacgagg
    24241 aaatatgaaa tgacaacccc aaccccgaaa actgaaaacc ccaaccgcta ccgcgcccgc
    24301 gatttgtggt gtaacgattt tacgcaacat ctcaatttcc acttgggcag cgcgtttaaa
    24361 tatattttcc tgcacaaaga cgacggcggc cgcgaagact tggaaaaggc gttgtggcac
    24421 ttgaaacggc agcgcaacga cgcgccgaag tttaaaaaac tgaaaaacaa gctttatttc
    24481 aagctgtccg aaaagctgga cgcgtgcgga ttcgataccg ataccgatac cgataccggg
    24541 caggcactgg acgcaatcct gtacgccgcg tcggagtaca acgaagacaa tatctcttgg
    24601 gcaaccgcct gtgtcaaagc cttgttgaag gaaatgccgc ctgaaacgga gcgcggcggc
    24661 atttagcccg ccaacccgac cgcttttcgt cattcccgcg caggcgggaa tccggaaccc
    24721 cgccgccgcc gtcattcccg cgcaggcggg aatccagtcc gttcggtttc agtcgtttcc
    24781 gataaattcc tgccgcgttt ggggttctag attcccactt tcgtgggaat gacgaaagcg
    24841 gtgggaatga cggaaagcgg cggaatgacg aaagggcgga atgacgaaag ggcgggaatc
    24901 cgaccccgac ccataaaacc gaccgaaagg aaataaaaca atggataccc tgttaagcat
    24961 catcatcgcg ctgtcgttcg gcggcgcggc gattttggcg atatggctgc tggtggaagc
    25021 cgccgatgcg gttttgcgcc gcaagcgcga cggcaaagac gacggcttgg aatcggacat
    25081 ttaaaaccca aaacccaaaa cgaaaggcaa aaaatggcgg caacggaaaa aatcgaaatg
    25141 cgtacctgca aaacctgcgg cgaaaccaag ccgctggagg ggtttcatat tgccaaccga
    25201 agaaacccga accggagcta ttacaaatcg tgcaaaacct gccgaaacaa ggaaaccaat
    25261 caaaagcagg cagaaagacg cgcggcggaa aaaatcgaat tttcgtcccg ccctgcgagc
    25321 atccgcgacg cggttgccct cgcacacgcc gcctacccga tattgggcat cggcttgtgg
    25381 acaaatccaa gcccggcaag agaatgcgcg tgatgcgcct tatcctgcct taccccgtat
    25441 cggcaaaccg atattggcgg atttggcgca acagggcggt caggagcgcg gaggcggcgg
    25501 cgtataaaaa aaccgtccgc cgtatcgcgc aagaggcggg cgcgatgccg tctgaaggca
    25561 gtgtggcggt gcgcctgcgc ctgattccca aagccaacaa agacggcagt gcaaacaaga
    25621 cggttatcga tttggacaac gccctaaagg ttgcgctgga cgcgcttcaa ggcattgcct
    25681 atcacaacga caggcaggtc agacgcattg tcgcggaata cgccgacgag ccgaaacagg
    25741 gcggcggttt ggcggtggag atagaggagt tgaaatgagt agggacgaat tgagacagtt
    25801 ggcgttggcc ttccgggcga ttgaccgggt aatcaatagt cgcggggtgc ggtcgaatac
    25861 tgtgaaaaac cgctcaaaga tgatgaggcg caagggtaaa caggccgtct gaaattctaa
    25921 ttagaacgga cggcagtcta attagaatgg gaaaggattt gaaatggcgg tcaatgttgc
    25981 ggtggtgaaa acgccggtgg gaacgcttgc accggcgacg gcatacgatg cggaactgtt
    26041 gcgggattac gccgccggcc ggcagttgaa ggtagaaatc aagcagatgg gcaaccgcag
    26101 ttatcagcac cataagctgt ttttcggcgg gcttttgcct ttggcgtatg aatactgggt
    26161 gccgtcgggc gggctggtga cggacgggga gcagaagctg atcagcggtt ttgcgcggcg
    26221 gcttgaggcc atgcattcga gcggcgggct gtttttggag tttgccgacg agtttgtacg
    26281 ggtggtggcg gcaaagcggg gcgagagaat cggcgcggtg ttgcaaagca tggaggcttt
    26341 ccgcaagtgg ctgacgattg aggcagggta tttcgatgtt tacgagacac cggacggcta
    26401 ccgcaaggag gcgaaaagca tcagcttcca cagtatgggt caggaggagt tcaaccggtt
    26461 ttaccgggac tgctttcagg tggcttggaa catgatgctg tcgtctaagt ttgagtcgga
    26521 ggaggcggca gaacgggcgg ctatggagat gatggagatg ggcggatgag caagattacg
    26581 cagtcggcac gcggcgagcg ttgccagata cgtttcccgg gcatttgcaa tcatgacccg
    26641 gaaacgacgg ttttcgcgca ttaccgcttg gcgggctatt gcggcacggg catcaagccg
    26701 cccgacttta tgggcgcgta tgcctgttcg cgctgccatg atttagccga tgggcggttg
    26761 aaggcggatt gtgcggaagg ggaaattcaa acggccttcg cggaaggtgt gatgaagact
    26821 ttggttttgt tgcatgaaaa agggttaatc aagctatgaa tcagcaagaa tttgaattta
    26881 tgaacgactt ggcgcgtgct tttgagcgtc gttaccgtga tacgcacagc ctaaatagat
    26941 gtttgagtat cgaaggtcgc tatatggggg aggaagtttg cccgcataag cctgaaatcg
    27001 gtttgagata cggcgaagat gccatgtttc tgactctgca ggcatgggcg aaggtggatg
    27061 cgccgcaaca agaggccgtc cgtatttcgt tcggcatcgg tgcgaagtcg caggcagcct
    27121 acgaggaacg cttgcaggct gaaatcaggc ggcgcggcga gcagcccctg catttgcaga
    27181 cggatttagg cttggccgcg tggtataggg cgatacggca ggcggcaggg gatgattttg
    27241 atttgctgtt tgagaaggtt tgattcagta tagccattaa gtaagcggga gtgatatact
    27301 ctcgcttacg tttttttaca ttaaggggag cgttatgctg aagcacatca aagcccttag
    27361 atttttgagg gtaatatcat ttgtgatgag tgcgattttt tttgccctgt cattggctgc
    27421 aaaaggcggg gccgtcacga atttctttat tttgtttttt gtgttattga tagcaggctc
    27481 tcttatgagt aaagctatta acaagttaaa tgaaaaggaa aaggaaaagg aaaaaatacg
    27541 cctgcttttc gcacaaagag aaaaatttta tcgtatcttg gaaaatccgg aacagggatt
    27601 tactcctcct accgctcttt taaaaagtgg cgaaacttgt tttttgattg attatgttaa
    27661 tatgggcgag gtggttactg agagtgtcag aacctataca gggacacgtt taaaacttgg
    27721 ctccacaccg gtttatttag ggggcgggaa atccgtagca aatgaaaaac agaagaatgt
    27781 tgcgtacgga gagttggtat tgacgaattt caggttgatt tttgtaggga atatgagaag
    27841 tatagatttg ccgttggata aaataaacag cgtggaatgt tttcaaagca gcatccgaat
    27901 cagccaaagc ggcaaaaaca aaccgatttt ctttaatacc gtttttaatc cacagttatg
    27961 gaaagaggct atattggtac tttccgataa gaagtgagac ggttcttgtg gcgcaggttt
    28021 gcatatttcc caaaacccct tgcattcgca gggggttttg ttttatattc ctgttcgtgg
    28081 cgtaagaacc actccaaagc ggcaatcact ccgtcaatgt gattttttca tgtctatagt
    28141 tttctttcct tgttgtttgt ttcgatagcg cagcaggaag tttctatgac cgcgtgggcg
    28201 acgaatacaa tacccgtaag gggaataagt ccgcccatct ttggagggtt cttaaccacg
    28261 cggtcgccca taagggcaat ttaagaaact tccaaaggac tatcaaaatg aatcaagttc
    28321 aatatttcaa cttcaatcaa aacgcaatcc aagtcatcaa caaaaacggc gaagcgtggt
    28381 ttatcgcttc agaggttgcc gctatgctgg gctaccgtga ttcatacaat atgacccgta
    28441 tcttggataa cgatgaaaag ggtactcata atgtgagtac cctaggcgga aaccaagatg
    28501 tatcggttat caacgaaagt gggttctatc acgccgcttt taaatcccgc aaacctgaag
    28561 tcaaaccctt ccgcaaatgg gtaacatccg aagtcctgcc caccatccgc aaaacaggcg
    28621 gctaccaaat cggacaaaaa accaccgtcg acgaccgtac cggattgcgc caagccgttg
    28681 ccgcgcttgt cggacgcaaa ggcatagact actcctcagc gtacagtatg attcaccaac
    28741 gcttcaacgt cgaagccatc gaagacatct ctaccgagaa gctgcccgaa gccgtcgcct
    28801 acgtccacgc attgacactg cacacaggct tgacgggcga agtccttgac cgcgaaccgc
    28861 tgcccgcgcc tgccctgccc ataagcggca acgccctgta cgacctcgcc gtcgccgtca
    28921 gatacggcgc gtgggccatc caaatgggca aagacgtttc cgcaccgctc aagcagctcg
    28981 gctgcaaaca ggcggtaatg atgtggacgg tttgggcgga aacgcgcagc cgcctcaaag
    29041 ccgccgcaaa cgccctcgaa gccttaaacg cacacgccga tgcggaacac gcggcaaaaa
    29101 tccgtccgat gctgcccgaa atccgcaacc tatcggcggt ttgacgcagc agggaataca
    29161 aatgccgtct gaagattcag acggcctgtt gttttttccg gcaataggtg tataattcaa
    29221 atcgttaccc ttgcggggct tttcgcacgc ccaaatgata tgaattttta agcccgtaca
    29281 taacaatgtg cgggtttttg cgttttaggc tgtccgaatt tgagcttctg cctgtacagg
    29341 tagcggcgtt tgaattttca gacggcttga ataacctgga attttgggtt ggaggattcc
    29401 ccggccggtt tcaggtttct atgggtgttt gccttaacgg gcaaaggctg aaagggtgct
    29461 taaagcacta aggaagatga cgcggacgct tccaataaac aggggggcgc gccccactct
    29521 ccttgttgac cctgtaaaga aaacgcggag caagtgaaac gcgtttgccc gacctaaatg
    29581 gttgtcatgc caagacagac tataaagcgg ttcttgcacc cttcgcccta tgccttgccg
    29641 gtgtagggcg ttccattttt cctatgtggt gagtgtgctt agccgtctaa ttctgagagg
    29701 ggttggtgtt agacggtttt ttttaaatct tatcgattaa acggttatat tttgccagta
    29761 gctcaagata ggcagccgcg tattgcggaa cgccgatttt gtgccattta cttactgacg
    29821 ttgggcttat ccctaaccgc cttgataggt ctgcttgtgt aatttgtgca gattctaaaa
    29881 gtgttttaaa ttttgtgttt tgcatattgc aatatctaat taagttatat ataatatgta
    29941 attatattaa ttctgattgg agtttgtcaa atggcagctt taagcgggct tgaaactatt
    30001 aaagaggttc ggaagcggca aaataaaaca ctgctcgcat ttagtggcgg gaaagatgcc
    30061 gttgctacat atctcgcaat taaagattat tttgatgagg tagtcccata ttatttatat
    30121 ctcgtccctg atttggcatt tgttgatgag cagcttgata tgtatgagcg gcagtttggc
    30181 tttaaaatca ttaaactccc ccatccgtca ttgcatagac tgcttaataa ttttgttttc
    30241 cagccgccgc aaaattgcgc tgtcattgaa gatgcagggt tgcctgactt tgattacact
    30301 gatattcagg ctgcgatgtg ccaaatgcat ggattggata aaaaaacatt agttgctgat
    30361 ggtgtccgtg ctgctgatag cccgatgcgc cgaattgcga tccaaacaca tggcagtata
    30421 agccacaatc tgcttaaata tcaccctatt tgggactgga aaaaggctga tttggtagag
    30481 tgctttaaaa agcacaatgt ccggcttggt agtgattaca agatttttgg gcggtcattt
    30541 gatggcttgg atttgcggtt tttgctcccg ataaaaaaac attatcctga tgattacaaa
    30601 aggatacttg agtttttccc gatggctgat ttagagattt ttagatggga gtgcgcaaat
    30661 ggcaaaatat gacttgaaac aacaggctgc tgataaagtg gcagccgcta aaaaccaagt
    30721 ggcaaaatgg aagcgcaagc aaaagccgct tgtaaatatg ccggaattaa caggtaaccc
    30781 ggaaaccgat agtaaaaatg acttagatgc cgtcaaacaa ggattccgag accgcttaaa
    30841 ggcggaaaac aagcgaaaag tatcagcgac agatagcgag tattggagtt gtatttgttt
    30901 ccagactcgc gctcaggcgg atgcgtttat cgccgctatg aattggcggc agtttggcga
    30961 taagtatatt gatggcgtta aattggccga gtatctgggt attgagttgc ctgatgagga
    31021 ggtggctttt gtggctgatc cgaaagttga taagacttgg gcaggatttg tagattgatt
    31081 tttagtagcc gtccaatggg cggctttttt gtgtctgtaa aaaggaggtg tctatgcgtg
    31141 gcgtaaaagt gcatggtaaa ccgcatattc gcggcaaggt cgctggcggt cgtggtcgta
    31201 gtaatgcgtt ttcgggtcgt tccagcggtt cataatctta aagcctgatt ttgttgggct
    31261 ttttttattt ataaattaac cccatgtaat aaaaggtgtt ttatgccagt taaaggtgca
    31321 gatatttgcg gcgcaaaaac ccgtagcggt ggagtgtgcc aaagccctgc catgcctaat
    31381 ggccgttgcc gattgcatgg ggggaaaagt acaggcgcgc ccaaaggtca tacaaatagc
    31441 cgtaagcccg gcagcctgta ttctgatttt tatacagacg aagaaaaaga gattgctgct
    31501 gaaattgagc ttgagagtgt tgatgaagag ttgaaactgt gtaagattcg attgcgccgc
    31561 gccatgaggc ttgaagaaga gcagaagcgg cgacaagatg aagatcggtt agagctggac
    31621 agattggtgg agacgccatc tgttattggt ggtgttgcaa tccaagacga ccctgatgtg
    31681 cctcctgtga aacaaaagac ttttgtttat cgtgattacg gggagattat taaccgcata
    31741 cttgcccgta ttgaatcttt gacgatgaca cgtcagaagc tgcttaaagg gttagtggtg
    31801 gatttgaaat catctgatgg aagtatgacc cccaaaacag gcttggcggc ttttgagtca
    31861 gtggaagaat ttttaaaata cgcgcatgaa gtagatgata tggtgtgatg gaacaaggtc
    31921 atattaatgc agcccgattg aaatcatacg gcagcttgta tatgtttaca cgctggatgt
    31981 tttatcaaag gcgtggctat atttggcagc gagcgaatca tcatatccta atctgtaatg
    32041 cgcttgaacg tgtttttaac ggcgaaacaa aacgcctgat tatcaacatt ccgccgcgtt
    32101 actcgaaaac ggaaatcgcg gttgtgaatt ttatcgcatg ggcgatgggg cgtgtgcctg
    32161 atagtgagtt tatccacgcg agctattcgg ctacgttggc ggtcaataac tccgtgcaga
    32221 ttcggaattt ggtgcaacac gaagagtatc gggcgatatt tcccgatttc gcgctggcaa
    32281 gcgagagcgg ccatcactgg aagacgactg ccggcggcgt gatgtacgca acaggtgcgg
    32341 gaggcacgat tactggtttc ggcgcgggta agcaccgtga aggcttcggc gggtgcatca
    32401 tcattgacga cccccataag gctgatgaag cgcgaagcga ggtcaggcgg caaaatgtta
    32461 tcgactggtt tcaaaatacg ctggaatccc gtaaaaacag ccctgaaacg ccgattatcc
    32521 tcattatgca acgcctgcac gagaatgatt tggcgggctg gctgcttgac ggcgggaacg
    32581 gcgaagagtg ggagcacctt tgtttaccag cgattcaaga cgacggcacg gcgttgtggc
    32641 ctgaaaagca tgatattgaa acactgcacc gtatggaaca ggctgcgcct tatgtgtttg
    32701 ccgggcagta tttgcaacgc cctgccccgc ctgacggcgg tacgtttaag cctgacaacc
    32761 tgcaatttgt gaaagccctg cccgccggta atatccgatg ggttcgcgga tgggacttgg
    32821 cgtccactgc gaacgacggc gactacacgg caggcggcag gcttggtgtg actgaggatg
    32881 ggcggtacat catcgccaac gtcgtgcgcg gtcagtatgg cgcggacgaa agggacagga
    32941 tattgcgcaa cacggcgcaa aaagacggcg tgaaaacgaa aatatctatc ccgcaagacc
    33001 ccggacaggc gggcaaatcg caaaccttgt atctaacccg tcaactggcg ggtttttctg
    33061 tatctgcaag ccccgaatcg ggcgacaagg ttacacgcgc cgagccgttc gcggcacagg
    33121 tcaacatcgg caatgtgatg gtgttggatg acggcacatg gggcacagac gcgctgattg
    33181 cggaaatgcg gatgttccca aacggtcagc atgacgacca aatcgactgt ttgagccgtg
    33241 cgtttggcga gctactggat acccgaacgg gcatgattga tttcctgcaa tcgcaggttg
    33301 aggctatgaa atgagtaaaa agacaccttt atcacaaggt tttattgccc gtgtggctgc
    33361 cggtgtccgt tacgccttta ccggcaatgc ggacgggtgg tttgacgcgg gcgagccttt
    33421 agcccctgtc gcgcagcagg cagaggggcg gcggtttgat tacgagccgt tctacaacgt
    33481 cgggcattcc agaccgcgcg aacgtgaagc ggtaggcttt gcacaattac gcgcccttgc
    33541 cgataactac gatgtgctgc gtttggttat cgagacgcgc aaagaccaaa tggagtgcct
    33601 caagtggacg attcaaaagc gcgacgttga atcaacgaca aacaacgaat cacagcgcaa
    33661 agaccgaaag gtcgatgaag ccattgcgtt cttccaatcg cctgacaagg agcatacatg
    33721 ggcagactgg ctacgcatct tgctggaaga cctgtttgtt attgacgcgc cgtgtatcta
    33781 cccgcgtaaa acactgggcg gcgacttgta cgcccttgaa gtgatggacg gggcgacgat
    33841 taagcgcgtt ttggataata caggacgtat gccgttaccg cctgatatag cttatcagca
    33901 aatcctgcac ggtatggcgg cagtcgatta cacggctgac gagttgattt accgttcgcg
    33961 gaataatcga agctacaagg tttacggtta ttcgccggtc gagcaaatca ttatgaccgt
    34021 gaatattgcc ttaaaacggc agcttcacgc actggaatac tatacggcgg gcagtgttcc
    34081 cgatgctttg atcggcgtgc ctgaaacgtg ggcgatggaa gatattaaac gcttccaaga
    34141 atactttgat ttgctgttgt caggcgagac ggcggagcgg cgcaagctgc gttatgttcc
    34201 gggcgagttg gctagaaact tcaaagagac gaagcagccg ccgcttaagg acgtttacga
    34261 cgaatggctg gcgcgtgtcg tctgctttgc gtttagtgtc gagcctacgc cgttcgtggc
    34321 gcaggtaaac cgaagcgtgg cagagacgag ccgtgagcag tcgctttcag acggcatgag
    34381 cagcctgaaa aactgggtaa aagccctgat tgatgatgtg cttgcccgat acatgaatat
    34441 ggcggcgtat gagtttgtct ggaaggaaga ggaatcactc aacccgaaag aacaggcgga
    34501 aatctacgcc atttataaaa acgcaggcat cttgaccgct gatgaaatcc gcgccgaact
    34561 gggtaaagag ccattaccgg atcaggagga gcctgaaccg aatcggcaag acgattggaa
    34621 gcctgaaaag cagccgaacc aagaggctga aaagctggga aagtcggaaa gcccgatgag
    34681 cgaagacgaa tctgccgcgc ttattgaggc ttatttgctg acacgcattg acggcttggc
    34741 tgaacaaatc gcggcactga ttgatagtgc ggccgtcgat tggcaggctg aggatttggc
    34801 ggcggaattg agccgcgcgg caggggttgt tgcaaacggc ttgaattttg gcgattggtc
    34861 gggattgtcc gatgtggtcg agccgataat caggcgtgtt gcagaagatg gggcggttgc
    34921 cgccttgttg cgtgtcatgc ctgaacctgc cgtcggtatg gttacgaaca ttcgaagccg
    34981 tgccgtcaag tgggcgcatg aacgcgccgc cgaaatggtc ggcatgaagc gggtgggcgg
    35041 cgagcttatc caaaatcctg ccgccgagtg gcaaatcaca gagggaacgc gcgaaatgat
    35101 acgcggccaa gtggtcgaag ccatgcgaaa cggcgacagc gtgcaggaat tggcaggccg
    35161 tctgaaagaa tctcacgctt tcagcaatgc ccgcgcccga accattgccc gaacggaaac
    35221 ggcgatggcg gacggtatgg gcaacctgat aggctgggaa gaaacgggac tggttgccgg
    35281 taagcagtgg ataaccgcaa aagacgacaa ggtgtctgat gtctgcaatg ccaacggcga
    35341 gatgggcgta atcggtttgc acgagccttt ctctcacggt gcgttgacga taccggggca
    35401 tccgaactgc cgatgcgcgg ttgtgcctgt tttggcagag gatatgcctg aatcttgatt
    35461 cctttgggta aagtgggtgt gttttgccgc ctcttcgtgg ggcggctttt ttttggagca
    35521 aatcaatgac gaagttatac gcggaaatcg ccaagatgga ggcgcaggac gacggcacgg
    35581 tcaaagtttg gggctatgcc tcaagtgagg cggtcgattc ggacggcgaa gttatcgcgg
    35641 cggaagcaat gaaggcggcg attcccgatt atatgaagtt tggcgcggtg cgtgaaatgc
    35701 acggctcaaa cgcagcggga acggcgattg aaatcaacgt agaagacgac gggcgcacat
    35761 tttttggcgc gcatatcgtt gaccctattg cggttacgaa agttaagaca ggcgtttaca
    35821 aaggcttttc catcggcggc agcgttaccg cccgcgatga tttgaacaag tcgcaaatca
    35881 cgggcttgaa gctgacagaa atcagccttg ttgaccgccc tgccaatcct gacgcggtgt
    35941 ttacctgctt taaagcggac aagccgaaag ccgatgaaga ggcggataaa gatgaagacg
    36001 acaagtcagc cgataaaacc gatgaaacgc cagccgatga tgctgaaaag gcagacggcg
    36061 acaagaaaga cgataaagaa gacaaggagg acgaagccga aaaatcggca agcgtgaatt
    36121 tgtccgaatc tgaaatcgcc atcttgaaag cagttttggc taaagcagac aagccgaaag
    36181 acgagccggt cgccaaatca atgtaccaag tcaaatcact ggctgatgta ttgatgtcgc
    36241 tgaaatggct ggttgatgac gctgtctatg ttgacatcga tgaagccgtt atcgcgcaaa
    36301 tcaaagaatc agcagccagc ctcgccgaat cgctgaaagc gttggcggca agcgaagccg
    36361 ataagctggt cgatggtttg gcagccaaag ccgacaaatc agacgatatt gccaaagcgg
    36421 aatcggctga cgaactggca aaagcgcaag acgcgctgaa gaaatcgaat gatgcccttg
    36481 ctaaagcaca ggcggaaatc gagagcttga agaaacaggc agcaccgccg aaaggcagta
    36541 cgaaagccat cggcaaggca gaagacaacg gcgaagaccc attaaaaggt tttcagccga
    36601 ttgtaaagaa tgacggttcg cttgatgatg tggcaacact cattaaagca gcacaaacag
    36661 gccgtctgta acaccgctta caggcggttt ttttattatc aggagcgata aatgaacgtg
    36721 aatcaactca cacaagaaac aattgagctg atgaagtcag cacaagcaaa cggcgagccg
    36781 ttgaacaaag gttacaccca acctaccagt cctactactg gcctgcaaat ctacgacctg
    36841 tccgcgccgt ctcaaaagct ctatccggta ttgaccccgt tgcgtaaccg tatcccccgc
    36901 gtgggcggcg gtcgcgccat cgactcaaac tggaaggcga tcacgaatat caacgtaggt
    36961 aatcaacgcg ccggcatcag cgaaggtaaa cgcggtggcg ttatcaatca cgaaattgtt
    37021 gaacgtaacg cgcgattccg cgccatcggc ttggaaaacc aagtaacctt tgaagctgac
    37081 tacgcagcgc gtggcttcga ggacgtgaga gcgttggcgg ttgcccaaac cttgcaggct
    37141 accatgattg ccgaagaaat gattttgttg ggcggtaata ccagcttgaa atcaggcgtt
    37201 acacctactc cgaccgctgc cgtttcgaat gacgcgacgg gtaaaatcag cggcaacacc
    37261 ttgtctgtaa tctgcgtggc tttgagcttg caggcatatt gggacgttgc aggcgcgaac
    37321 aacggtgcaa tcggtcaaag cctgaacatc aaaactgccc aagtccctgc caaaatcaca
    37381 cgccaaaacg cggacggttc taccgatact ttcggcggtg gttctgctca aaaatctgcg
    37441 gccgcttctg tttccggtat tgcgacaggc aagaaagtaa ctgctatggt tccagccgtt
    37501 cgcggcgcgg ttgcttacgc ttggttctgg ggtgctgccg gttctgaaaa actgggcgcg
    37561 gtcactactt ctgcgaaagt ggatattttg gctgacgctg aaggcactca aaccgccgct
    37621 tctttgccgt ctgaagacaa ttccacttcc attttggaat ttgacggcct gttgacccaa
    37681 atcgccctgc ctgattccgg cgcgtattgg gcggataaca aaggccgcgg cctgacctca
    37741 gacaacgcag gcggcgtgta tgagtttgaa gaagcgttcg cgcatttctt tacccgatac
    37801 cgcctgtccc ccgataccat ctacgtcaac gcccgtgatt tggcggcact gaccaagttg
    37861 attatcggta gcaacggtgc gccgatgatt aaattgaacg ttgacgtgaa caatacggcg
    37921 aacatccgcg ccggtgtcgt tgtcggttcg tatatgaaca agattacagg cgacgacctg
    37981 aacatcgttg ttcatccaaa cttgcctgcc ggtacttacc tgttctactc aagccgtctg
    38041 cctgcctacg ttcagggcat cggcaatctg ctgcaagtgc gtacgcgcca agagtattat
    38101 caaatcgaat ggccgctgcg tacccgtatg tatgaatatg gcgtttacgc agacgaagtg
    38161 ttgcaaggta tgtttatgcc tgcctttggg atgatcacca acgtgggtta agcctaatca
    38221 ggccgtctga attttcggac ggcctctttc ttttggagat tttgaaatga ctgaaatggt
    38281 taaattacaa gcccctgaag gctttaccga tgtttccttt ggtagccaaa gctacgcagt
    38341 gggcgaaaac ggcgttgttg aagtgccgtc agaggcggcg gaatttctgt atcagttcgg
    38401 ttttggcaat gttgccgccg agcctgccga agagcctgaa aaagccaagc gcggacgcaa
    38461 acctaaaacc gaacagccgg tagaacaagc cgaacctgcc gaagcagaag ctgaaaaggc
    38521 tgaataacga tggccgccct ggtatcgctt gaggagttca agcagcgtat cggcgttgaa
    38581 catgaccgca gggacgattt ctttctgagc gtcattgacg gcgtgtcggc ggcggtggaa
    38641 gcctatatcg gtcgcagtct ttgggctgcc gattatgtcg agcggtacga cggcaacggc
    38701 aaagaccgca tcgtgttgga caattaccca gttctgtcgg tgtcgtccgt caaaatcaac
    38761 ggcgcggatg tcggcggctg ggagtttgac aactggctgc tgatgcgccc cgaaggtttc
    38821 acacgagggc tgaggaatgt cgaggtatcg taccgcgcgg gctatgagca catacccgcc
    38881 gatatacgcg aagccgtgat gattatcgct atgcaacgcg tgaacgaaat cgagaacagg
    38941 ggcgcgcaaa gtaaaacctt ggcgggtgag agcgtatcgt tttcggcatt acccgaaacg
    39001 ggcggtatgc cgccgtctgc gttctcaata cttaaggaat accggcgcaa gggggtttga
    39061 tggtcaaggt tgaatttatc ggcggcgata ttctggcggc ggtttttaag gcatatgccg
    39121 ccgatgttca agatgcggtc gtcaaatcag tgggcaggtc ggcattgcgc ctgcaacgcg
    39181 aagtcaagca gaaccggtta tcgggtcagg tgttgagggt aaggacgggc aacctgcgac
    39241 gctccataca ccagcgcgtg aacgtttccg gcaatgttgt ttcgggcgaa gtcaacacga
    39301 acgtccgtta cggcatcgcg catgagtatg gtttcgcggg caatgtcaat gtgaaggctt
    39361 cgctgcgtca ggtcaaacag gcgtttggga aaccgctaaa atcgccgcga tatgtccacg
    39421 tccgcgccca tacccgtgat gtgaagttgc cggagcggtc gttccttcgt tcggcattgc
    39481 gcgatttgac accgaaattt gcggacgatc tgcaaaaatc gattagaaag gtgctgaaat
    39541 gaatcgtgag gcggtttatt ccgcgctttg gtcgaaactg gacgcattag gcggttttgt
    39601 taccaagagc cgtaaattac tgcactggaa cgatgtgaaa cgctacgacc agcctgcgtt
    39661 atttatggca cagggcgata tgcaggcgtt gacattgacg gggcaggaaa ccaagtggat
    39721 tttgcgcgtc gatgtttacc tgtacgttca gacggcaggc gaaccgcccg cgcccattat
    39781 gaatccgctg attgacgcgg tgtgcaatgc cgtgaacgct gtccaccctg ttacaggcaa
    39841 gacggatttg acggcagacg gcgcggatat tgagtattgc cgcgtcgagg gtacggtgga
    39901 aacagacgag ggaacgcttg gcgaacaggc ggtttgtatt attccgattg tgatttgcgc
    39961 cgcgtaatgc ggcttttttt gaaaggaaac gtcatgcaac tgactttcgg cgcgggcgag
    40021 gtgttcgcgc aaatgattac ggatgcctac ggcaaccgtg tacagaatgc aacgcccgtg
    40081 cgaatcatgg gcttgcagga gatgtctgtc gatttgtcgg cggaactaaa agagttctac
    40141 ggtcaaaacc gttttgcgct ggctgtggca caaggcaagg tcaaagtgtc aggcaaattc
    40201 aagggcgcgt taatcaacgg tctgaccctg aataccctgt tcttcggcgc ggaatatgcg
    40261 accggaacaa tgaaggcact ttgggcagac actacgggta aggctatccc tgcgcgcggt
    40321 gcttataccg ttcaggcaac cgcgcccaat ggcggcacgt tcgttgaaga cgcgggcgta
    40381 atggggcaag acggcacggc attcattaag gtcgccggca atccgacagc cggtcagtac
    40441 atggtatcgg aaaccggctt gtacaccttt aacgaggcgg acaagggcaa aaccgtttat
    40501 ccgagcttta cctataccca aacgatgccg tcagccaaga agattgattt gtccaatatg
    40561 gcgatgggca atacgccgac gttccagttg aaatacctga cgcagttcaa aggcaaaaaa
    40621 gccctgttgg aactggaaag cgtaaccagc ggtaaattgg gcttgttctc gactaaaaac
    40681 gacgacttct ccgtccccga aatcgacttt accgcctcaa ccgacgaggc aggctttaaa
    40741 gtcggtacgc tgtggattca ggagtaataa tgcaggtcgt ctgaaaaggc ggctttttta
    40801 tttgaccaaa gtcaaggaaa taaaaatgac cgtacgaatt aaaggtgtaa ccgtcgaact
    40861 gaacggcgtg gattatgtga ttccgccgat tgcgttgggc gcgttggagc agttgcagga
    40921 gcgcatcggc acatttgacg gcaacgcaat ggatgccaaa caaatctcta ccgttatcga
    40981 ttgcgcccat gccgccctga agcgcaatta cccggattta acgcgcgaag aagtggctga
    41041 tttaatcgac atcggcaaca tgaacgaagt atttgccgcc gtgatggacg tttcgggatt
    41101 gaaacgcaag gagcaggaag ccgcacaagc gggggaagct caggcggcgg attaagtttc
    41161 ggcgcgatga ttgcccacgt ttgcgcctct accggctgga cgtgggacta tgtcgccgac
    41221 aacttggatt tgccgcgcat caaacacctg aacgagtatt ggcgcgaaca tccgcccgtt
    41281 catatcttgg tagcgtcgta tatgggcatc aagccgtcat cgggcagcgc acaaagcgaa
    41341 gcggacgaag ccgaagccat cggtatgctt ggcggtaacg aactgtctga agatgaattt
    41401 aacgccttgc tgaaagcgaa aggaatcatc taatgggtaa tgcgattttc cccacgtttc
    41461 ccggcttgaa gtgggggcgg aataaaacgg cggtgtggag taccgggacg cagaaatcgg
    41521 caagtgggcg tgagttccga accgcctact acacctatcc gcaatggcgg ttttcactgt
    41581 cgttcgaggt attgcggaca aaagcgtccg taaacgagtt ggagcagttg gcgggattct
    41641 tcaacgcccg taaaggcagc tttgaaagtt tcctttacga agatccgacc gacaacgccg
    41701 taaccgacca gcctgtcgga aacactgtgc agggcgttac gcgttatcag cttgtccgtt
    41761 cgatgggcgg atttatcgag cctgtgttgg cggtcaagga acgacccgcc gtcaaggttg
    41821 gcggtgtggc tttgacttat gggcgcgatt acaccgttac cgacaagggt gttttggttt
    41881 tcaacgcgcc gcaaccgccg aacagcctga ttacttggac gggcggcttt tatttccgcg
    41941 tgagatttac gtctgatacg gtggattttg aaaacgtttt gggcagctta tgggcagcca
    42001 aaaagattga gtttacgagc gtgaaactat gaagacggcg acaaaagaac tgattgattt
    42061 gctgcacagc agcgacgagt ttcaaatggc ggatttgtac accattacgc tttcaggcgg
    42121 ccaggtgtta cgacataccg gcgcagatat gcccgtcgtg tgggacggtc agacctacga
    42181 agcgcataag ctgattatca agcgcggcgc aacccgtatc gccgtcggct tggacgttga
    42241 ttccaacacc ttgcagattt cagccgcgcc cgattacagg cttgagggct tgcaatgggc
    42301 ggaggctgct ctaggcggcg tattggacgg cgcgcgggtc aaaatagacc gcgtattttt
    42361 tgatgcagag cttcgccccg tcggtgccgt gaatatcttt tcagggcgtg tgtcggacgt
    42421 atcgggcagc aggtcgtctg taaaagtcga tgtgaaatcc gacatcgagc ttttgaacgt
    42481 ttccagcccg cgcaatatct atcaggcagg ctgcatgaga acgctttatg acgacggctg
    42541 caaggtcaac cgtgagaaat tcacggtaaa cgggcgcgta actgaaaaca gccaaacggg
    42601 aactgtgctg aaacacaatc tgacgcagcc tgacgggtgg ttctcacagg gtgtgattaa
    42661 gttcacgagc ggtcgaaacg cgggcttgag caggacggtc aaggtgcata gcggcaatac
    42721 gttcgagttt gccctgcgcc tgccattccc gccgcaagcg ggcgatgtgt tcaaggttta
    42781 tccgggttgc gacaaacgac aaagcacctg taaagacaag ttccaaaata tcgtgcattt
    42841 ccgcggtttc ccttatatcc catctgctga tacggtggtt taaatgaggc cgtctgaaat
    42901 ggatttgaga gcgcgaatcg ttgaagaggc gcggtcatgg cttggtacgc cttaccatca
    42961 tcatgcaatg gtcaagggcg cgggtgttga ttgcgccatg attctggtcg ccgtctatgg
    43021 ggcggtcgga ctggttcccg aagggttcga cccgcgccct taccctcaag attggcatct
    43081 gcaccgcgat tccgagcgtt atttggggtt catcacgcaa ttttgccgtg agacgaaatc
    43141 gcctaaggcg ggcgacatcg cagtatggcg tttcgggcgg tcgttttcgc acggcggcat
    43201 attggcaggc gacggcaaga ttattcacag ctacatcggg cgcggcgtgg tgttggacga
    43261 catcaaccaa gccgaactta tcgggcgcga ggttcggttt tttacatttt cattttgatt
    43321 ttacgaccgt ctgaaagggc aggctttacg cgggggcgaa ggataaggaa atgcactgcc
    43381 caagttcggc attgatgttc acgagcgcat ccaatgaaaa tttgtcgatt ttcccgttca
    43441 gcaggtcgtt gatgcgcggc tgggtcagac cgcaatgttc tgcggcctgt ttttgcgtcc
    43501 aaccgttttc gcggacggta tcggcgatgt gcatcatcag gtcggcgcgt aaccgcatat
    43561 tggcggcttc ggcaggcgtg tcgcacagtg cgtcaaatac ggaggcgaag gtttggcttt
    43621 ccattatttc ttttcctgaa tcaatttgtt gtaacgtttt ttcgccaatt ccaaatcggc
    43681 gggcgcagtt ttttggcttt tcttttggaa agcgtgcagt acatagacgg catcggcaat
    43741 tttggctgta tagataacgc ggtatgcgcc gccttcttcc cgcaggcgga tttccattac
    43801 cccgctgccg atggtgttca tgggtttgaa atcgaccggc attccgccgc attggatgcg
    43861 gtgcagttga taacctgccg cttgtttggc gttttcaggg aattgccgca ggcaatccaa
    43921 tgaatcgcct aaaaaattta atggtttcat attttatatc tgttttgata taagtaaatt
    43981 atatcaattt tgataatttt tgcaagtttt gaggtggttt ttatgggtgg taaatcgtca
    44041 actattacat cggcagaaga gcggattctg tcgttacaag tacagcggtc atcacaaggg
    44101 ctgaccctgc ccgtcatcta cggcaggacg cgtgtggccg gtaatttggt gtggtacggc
    44161 gatttcgtta ccatcgagca taagaccacg acgcgtcagg gcggcaaggg cggcggcggt
    44221 gtgaaacagg tcgatatttc ctatacctac gaagccgccg tcatgcttgc tttgtgcgag
    44281 ggcgagattc agggcgtggg gcggatttgg cgtgataagg aaaagttcga ttcgctggca
    44341 cagttgcgcc tgacgcttat gcgcggcggc gatgagcagc cgttgtggac gcacctgcaa
    44401 caggcgaagc accaagacca agccttgaat tattcgggca cggcttattt gtgcagcccg
    44461 aactacgaac tgacgaaatc ggcgcaaata tatcagcaca atttcgaggt catcgggaaa
    44521 ttgggctatt ccggcaatat ccccgatgca aacccgcgcg aaatcgtatt ggatttgctg
    44581 acgaaccaac gctacggctg cggttttccg tcccaaaaca tcggcgatac cgaccgatac
    44641 agcaattatt gccgcgccgt cggtattttc ctaagccctg cctacacgga acagggagag
    44701 gcgcaacgga atatttccga gctgctcgag cagaccaaca gcgcggcggt attttcgcaa
    44761 ggccgtctga aaatcattcc ctacggggac ggcagctatt cggggaacgg cgcggtgtat
    44821 gttgccgaca ataaagccgt ctatgacctg agcgatgatg attttatcgt ttcgggcgcg
    44881 aaagaccctg taaaggtcga gcgcaaaacc aatgctgatg cgtttaatca gattcaggtc
    44941 gagtaccttg acagggacaa cgactacaac gtcgccatcg cggaagtgaa agaccaggcg
    45001 aatatcgagc agtacggatt gcgcccgaaa gacacggtca agatgcacgg catttgcgat
    45061 gcgaaggtgg cgcaaaaagt ggcacaacaa ctgctgcaac gcgccctgta cgtccgcaac
    45121 gaatatgagt ttaagctggg ttggaaatac tgcctgcttg agccgatgga catcgtaacc
    45181 ctgactgacg cagggcttgg cttgaataaa acgcccgtcc gaatcacgga aattgaagag
    45241 gatgaagagg gcgtattgtc cgtcaaggcc gaagactacc ccgttggtgt ttacactgta
    45301 tcggaatatc cgacgcagcc gtctttgggt tattcggctg actacaacgt ttcgccgggc
    45361 aacgcccatg tgccggtaat tttcgaagca ccgttgcaac tgacgggcgg cgaaccgcaa
    45421 atctggctgg caaccgccgg aggcgatatg tggggcggtg ctgaagtgtg ggtatcgaca
    45481 gacggcgaca gctacacccg tgtcggcgcg gtcaaccata aggcgcgttt cggttcgctg
    45541 accgccgctt tgcctaatgg cgcggttttt gatcgcacaa atacattggg cgtggaaatt
    45601 tcagcggggc aactgacggg cggtacggag caggacagcc gcgatttgct gacgctgtgc
    45661 tacgttgacg gcgaatttct ggcatacgcc aacgccgaac tgaaaggcgt gggacgttac
    45721 acattgggca atctgacgcg cggcgcgtat gggtcaacca tcgatgcaca cgcggcgggc
    45781 agccagtttg cgcgcattga tgatacgttg ttcagataca ccgttccgcg caattggatt
    45841 ggtcgcacgg tttgggtcaa actggtttcg tacaacgttt tcagcggcgg tattcaagat
    45901 ttggcagaag tgcccgcgta ttcctacacc atcaaaggtg cgccgcttgg tcaaatccaa
    45961 aacctacgcc tgacatcatc gtgggcatac ggcaaagaag ccgttattgc ttgggataag
    46021 ttaggcggtg ctgataccta cgatgtagaa gtctatgcag gcaatacgca aaaacgactg
    46081 cgaagcttga gcggtatcgt tgacaacgga ttcacctaca cacaagccga catgaaagct
    46141 gacggcggtc aagtgcgtga tgttgtcttt aaagttcgag gacgcgcggt tactgggaaa
    46201 actggcaact gggcgcaagt ggctgcacaa aatccgcaac tcaaaccatt gcaaggtatt
    46261 gagattgaca gcggtttgcg tcaggcgttt ttcaaatgcg ccatgccgtc tgaagaggat
    46321 ttcgcaggca ttgttatttg ggtgtctgaa aatcaggctg tcccaacaac agacgcaaat
    46381 aaagcctatg atggcgcgga aacatttatt tccatcacga aatgcaacgg aaaggattta
    46441 caacagggta aaacctatta tttacgcgcg gccggttatg atagcttcgg taaagacggg
    46501 atgcacgtca gcaacagtat tgcttttacc gttgccgatg tatcagtcac aaatttgaag
    46561 ggaagcaatc tgaataagga tttgcgcaac aaaatcgcat tgattgacgg caatggcgca
    46621 ggcagtgtaa acgcacgaat cgcagccgaa gcgcaggcgc gtgccgttgt tgcacgagcc
    46681 gctgaagacg caaaagccgc agcgaaaaaa gccgctgatg atttgacaac caaagccgcc
    46741 gaaattgggg gcaagattgc agtagtcgag cgcgtgaaca ataagcaggc gcagcaaatc
    46801 agaacggtta cagccgcgca aggcacaacc gccgcaggct tggaggccga aaagaaagca
    46861 cgggcagacg gcgatagggc ggaagctgcg gcgcgtaaga ctttggcagg tcgtgtatct
    46921 gcggctgagg gtaacatcac acgcgaaaca caagcgcggg tcacagccat caacgcccaa
    46981 accgccgcaa cggaagcctt gaaaacgcgg gtcggcaata ctgaaagcag tatcacagca
    47041 ttgcgcgaaa ccgttaatca gaaagacagt gcgaggtcgt ctgaaattca aacactgacc
    47101 gcgaagattg acggtgtttc ggtcggcggc cgcaactatg ccctatcaac aggaacgccc
    47161 ggcaaagtgc tgacagtgaa cgggaataat cagaccaaga acgttactat cgacgtttcg
    47221 tctgctttgg aactgaagca aggcgacagt ctgattatct cgtgcgatat cgaactgacg
    47281 aacgctacat cgccatacgg caagccctcc ccgcgaatcg gcgcggaact ttccgtaacc
    47341 tacgccgaca actctatcgg gtattttgcc gcatggtacg aagaagccgt cagtggtacg
    47401 accaaaacgc taaaacagcg tattgttgct aaacacacgg ttgccaaaga ggttaaggca
    47461 ctgcggaaca tcatcgttca ggcacggtat caaacatcgg aagctatcaa ggtttccaat
    47521 gtgaaactgg agcgcggaac ggtagcaacc gattggacac cggcaccgga agacaacgac
    47581 ggtttgcagg aagttcgcgg cgcggttcag gtcgttcaga cggccttaag caaagcgaca
    47641 ggcgacatca gggcacttgg cgaacgtatc gcgacggcgc aatcgacggc ggacggcaac
    47701 acggcggcag tacaagccca cgcgcgaagc atcaacggct tggaagcgca atatacggtc
    47761 aaggttgacg taaacggcaa agtggcgggt tacggcttgg caagcacgcc gaaaaacgga
    47821 acgcccgaaa gcaaatttat tgtcaacgcc gaccgcttcg gcatcggcgc accgggcaaa
    47881 gccgacgttt tcccatttac ggtagataca cggcaaaacc gtgtcggcgt gaacggcgaa
    47941 ctggtggtga acggtaaggc gattgtcgac aggttgaacg ccggggatat tcacggcgat
    48001 aaaatcgcgg caaacacgct gaacgcaaac cgcctgaaag ccagaagcgt tacggcgcgg
    48061 gagatcaggg caggtgccgt taccgccgat aagatgaacg ttaccagttt gagcgcggta
    48121 tcttccaatc ttggaagcat cacgggcggc agcctgaata tcggcaacgg caattttacg
    48181 gtgtcttcag acggcatcct gacggcgaac aatgcggtaa tacgcggacg gattgaggct
    48241 gattcgggtt atttcaacgg tacggtcagg gcttcgtccg tcgagggcga tgtgatgaag
    48301 gcgcacaggt tgcgttggac ggagggtaat gtttgggtgt tggatttgga tacagacccg
    48361 ctgccgaggg ttttgatacc gaattttcgg gttatttcgg aaacgtacgg caacaaagtg
    48421 gttcaggcaa ggctgatgct taatggggtg ttgcttaatc cgttggtaac caaagactat
    48481 gaattattta ggagatatta ttgggataat gcccataatt cccgcaagcc gaaaaggggt
    48541 aacagttata tagaactcac ggattatagg tacaaaaccc ggctggagta cccgattcaa
    48601 atcatcccgg ccggaaaacc gattagtttg aagttgacgc tggcttccca cgaatcggtg
    48661 ttctcgccgt tcgtgtcggt ttcgtatttg tcgcaatccg actatgaata caagcagttg
    48721 ctggggagaa tggtttggcg tacttttgcg gaggatttcc ggtacgacaa caggcggcag
    48781 gtttatttgg gcggcgacag acgcgtccat aactaccaaa atcagatgcg taaccattgg
    48841 gaaccgtatg gcggactgct gcagttgccg gacaatatct acggcatatc gttcgagtac
    48901 aggctttata ccaacagaga ttggagtacg atgattacgt tcgacaggtc ggatgcttat
    48961 gaggtggtta agaaataccg tgctaatgga tttgggccgt attctctgta tgagcgggag
    49021 tttgataccg ctattccgaa atctaatctg ttgttctttg tggaaaagtc ttggcagtat
    49081 atcgagctgc ggaatatcag ggtgctgatt ccggaatcgc gcgaaaacga ggtttggcag
    49141 gttggttgat gcccctgtat gccgccgttt gagtttttct gacttttgtt tggctatgcc
    49201 gtctgaacct ttcaggcggc attttgttcc tgccccgttc ggggcttttt tgtggagttt
    49261 tgttatgagt gagggcaaga agattgtcgc tttgggtttt tcagccgagg acggtatgac
    49321 cggcgcggtt gcagcctacc acgtcgtcga atatatcggc gcggattacc gcaacggttt
    49381 tatcacggca acgttgaacg gttatgtgtc ggaaaacgcg tttaaatcgg gcaaacagta
    49441 cctgttgacg cgcacattgg attttcagga agcagtcata accgcacccg accccgattg
    49501 ggtgtaccgc aaggcgttgg agggggcatc cggcatacct aaagacgcac agcccgtcta
    49561 tgcggaatag gttttcagac ggcatcggac accgcagggc gcaggctttg cggtgtttta
    49621 tataaggagg ttgttatggg caggttgggt tggatattgg gttggcggtt tttgcccgcc
    49681 aagtttcagg cgtggttgtt cggcacggcg acgcgggtgc tggaggcggt cagcggtttg
    49741 ggtcttgtcg gctacgcggc ggtgttcgcg tttgcgcccg atgagattta tgcgtggcgg
    49801 atttattaca aattccagga tattccggag gcgtggacgg tgggcgtgct gggggcggcg
    49861 gggctgcttc agacggcgtt gctgtttgcg cggggcttta agggcaatgt ggttgcggct
    49921 taccttttgc tgttttcggg ctttgtgtgg tttttgattt cggtggcgtt tttgggggcg
    49981 tatccgcctt tgaacacggg tatggttgtt ccgccgctgt tggcgttttt ctgtgcgctg
    50041 gcggggaata atgcgttgaa gtttttgttt tcggcgcaaa aggcgcgggg tttggcggat
    50101 gaggggtcgt gaatggagtt ctttcagttg ggtttgcttt ttgctgctct cggcggcgtg
    50161 ctaggcggcg tgtgggcaag ccttcaggaa cacgaccgtc cggtgcaggc tttgttggag
    50221 gcggtgattt cggcaatcgc ggcggcggcc gtggcggaac gtttcgtgcc tttgaatcag
    50281 gtgtggacgt gtgcggcggc gggggtgttc gtggggatga tgacgggaca cgcactggat
    50341 acggtgcgcg cgctcgcgcc caaggttttg cgcggttact tgggcggctt ggcggaaaag
    50401 gctacgggcg tgaaagacgg agggtcttcg gatggaaaag attgatttcg agtggggcgc
    50461 aaggggcatt ttagaaaggt tttgaaatga aagaattggc atggcttgct gaagccagaa
    50521 aacacatcgg cttgaaagaa atcgtcgggg cgaatgcaca caacccgacg attgtgcaat
    50581 ggctgaaaga aatgggcagc ttccccggcg cgtcaaagtc ttggtacttt gaagacgaaa
    50641 cgccgtggtg tgggctgttt gtcggatact gtttgggcaa agcgggacgc gcggtcatca
    50701 aagactggta tcgcgccaaa gcttggtcaa tgtcgggttt gacgaaactc gaagcccccg
    50761 cctacggatg ccttggagtc aaaacgcgtc ggggcggcgg acacgtgttc ttcgtcgtgg
    50821 gcatagacgc gaaaggcaga gtcttgggat tgagcggcaa tcagggcaat atggtatcca
    50881 tcgtcccgtt tgaccctgcc gatattgacg gctactattg gccgtccaaa ctgattggcg
    50941 gaaaagccgt gccgtcattt cccaccgaag cgcgttatca gttgccgttc gttgcaacca
    51001 cggcaaaaca gggtggaagc gaggcgtaaa tgcttgggtt tttgctgaaa aattggaagc
    51061 cgctgcttat tttgtccgca atcgcgttct ttgccgtttc ttggcggcag gacagaacgg
    51121 cgcaatatcg gcgcggacgc gatgacgcga cgctggagat ttcggaacgt ttgaaagccg
    51181 ccgcgattga gggggcggaa caaagccgca aatcgtcctc cgcgtatcag gcgcaaaagg
    51241 cggcgcgtga ggaaagggaa agggtgcgtt atgtacaagt gcaaaagatt gtcgagaaac
    51301 ctgtttaccg caatgtttgt cttgatgctg acggcgtgtc aatcgtcaat gccgccattg
    51361 acgacggcgg ttaagccgcc cgccgatttg gtgcagccct gcccgaaatt gccgcatctc
    51421 gagggaaaca cgggcgcgga cgcgctgccg tggtcgttgc aagtcatcgg cttgtacaag
    51481 gactgcaagg cgcggcacgg cgcactggta cgggcgttgg gcgcggattg agttgtcaac
    51541 ttcgggttga cggttgcatc gggggaagtg tcaacatttc ccccgatttt ttatatatca
    51601 cgcggacgtg gtaaattttt gccgttttgt ttgcacgaag ggggtgtggt tgcatttttt
    51661 gcaacaactg ccggacaaca atgccgtttt tggttgacgg ttgcccggag aaaacaaatt
    51721 aacagggtgc agagatgact gcgaaagaat tttgtgaaaa gcaaatcgcc tactgggcga
    51781 atgagagccg caaggcaagt gatgacgccg atttgaaagc ctttgaattt gccgaacagg
    51841 aattggcgaa ttatcgggaa atgttgaaac aagtattgaa acgttatgcc gtctgaaaag
    51901 acggcttttt tgtaggagcg gtaaatgagc gatttggaag ccaaagtcag aataacggta
    51961 gaaaaccata cgaagcatgg gtttgattcg gccgccgccg atgttgataa ggcggcggaa
    52021 aagatacgcg gcagcggcga caatgccgcg aaaggtttta aatccgcaat cggcaatatg
    52081 aacgaaacga tgcgcagctt caaagtcaat atgaaatcgg gctttgaggc ggtgggcaat
    52141 caggcgcaac aggcggctga caaggttaaa accgaagtgg acaaaatcgg ttcgggttta
    52201 tcggggctga ccggtttgct ggcaggattg gcaagcgtcg gcttcgcgaa atcgatgctc
    52261 gataccgccg atgcggttca atcgataaac agccaaatca gacaggtggt gtcgtcggaa
    52321 accgagtatc tggctgtgca gaggcagctt ctcgatacgg cgaaccgtac ccgtgcctct
    52381 ctggaatcga ctgccagcct gtacgtttcc acaagccgcg cgttaaaaga ctacggatac
    52441 acgcagcagg aaattttaaa attcacggag gcgaccaaca acgcgatgac gattggcggc
    52501 gttggtgcgc aacaacaggc cgccgcgctg atgcagttgt cgcaggcttt gggcagcggc
    52561 gtattgcagg gcgatgaatt taaatccatt gccgaagccg cgcctattct gctggatacg
    52621 attgcggaat atatgggtaa atcccgcgct gaaatcaaaa agctgggcag tgaagggcag
    52681 ttgacggcgg atgtgatttt taaagccata tcgggcgcgt cggagaaatt cggcgagcag
    52741 gcgaccaaaa tgcccatgac gatggggcag gctttgacgg tgttctcgaa caactggcaa
    52801 agcatggttt caaaactgct gaacgacagc ggcacaatgt cggggattgc tgccgttatt
    52861 aaactgattg cggataacct taatttagtt gttccgattg ttgcaggttt tgccgccgcc
    52921 attgccgccg ccgttgcccc cacgctggct ttgaatcttg cgctgcttgc aaacccgttc
    52981 ggaattattg ccgtcgcaat cggcacggtt atcgggctga ttgcgaaatt cggcgatgaa
    53041 atcgatgttt tcggcggcgg ctggtcgaat ctttccgatg tgattcgggc ggtttggcaa
    53101 atcatcacgg aaaccatcgg ggaagcggtg ggaaccgtca aatcgtggtt tgacgggctg
    53161 acaggctggc tgaatgagag cgtgggcggc tggtcgtcgt tgttcgggcg cgtgatgagc
    53221 gtcatctcaa gcgcaatcgg cgcgtatgtg aacgtttata tcaacatatt cgcaaccggc
    53281 tggatgctga ttaaagaagc ggcaaacgat atgccgcaat tcttcgccaa tcttggcaag
    53341 ctcatcggca atgcttttct gtctgcgatt gaatggatga taaacaaagc agtcggcatg
    53401 attaacagca tgattgactt tgccaacgca gccttgtcaa tggtcggcgg ttcgggcatt
    53461 aaaaagctgg atggcgttga cctcaaaagg atggacgacg gcgggcttgg caagcgtatt
    53521 accgacagta tgacgaaaga ccgcgccggc gcaatggcaa atgccatccg cgaacgagcc
    53581 gccgatattc acgaagccga tgccctcaag ggacgcggcg acggaggaca ccccaaaccc
    53641 gcccagaaaa agacgggcgc aaatcagggc ggcggcaaag gaggcaaatc ccgttcgggc
    53701 ggttcaggcg cggccaaaga cccgatgcag gcgtgggaag aggagattaa agcccagaaa
    53761 cttgcacacc gcgaaatgca gcgcgaaaca ctcacacacc aagaatggga tttggcgcgt
    53821 gaggcggaat attggcgggc gaaactggca acggtagatt tcaacggcaa aactggcaag
    53881 gaaatccgca cgaaaatcct ggcgcttgaa gaccagttat cgaaacagtc aactgaagcg
    53941 aaaatgaatc aggtggctga atgggagaaa ttggacaaac acaaactgga gatggagaaa
    54001 gacgcggcag accaagctct ggcagatgga cgaatctcgc agctagaacg cctcgatatg
    54061 gaaatcgagt ttgaaaaccg ccgttatcag attgcctatg acgcattgca ggaacggatc
    54121 gcgttggccg aacaagaccc gacatacagt cagaccgcaa tcgacaagct caaggctcaa
    54181 atgggcgaat tggggcaggg gcatgagcgg acgcaggcga agaacgaggg caaacgcgaa
    54241 aaccaacgcc ggaaagacgc gcccaacgtc atggaaatgc tgcaagacgg cggcaagaac
    54301 gtttggcagc aagcgcaaca gcagatgtcg caggcgttca ccgcaatgct gacaagggcg
    54361 caaagcttca ggcaggcgat gggcggcgtg ttctcatcca tacgtcaaac cttcgttcaa
    54421 gagatggtca gcaagccgct ggcggcattg gtcggacgat tcgccaagga aggcgcgatg
    54481 tggctggcta acggcacgcg ccaaattgcc gctcaaaccg ctacatcagc cgccgtaacc
    54541 ggtattaaaa aggttgaaac gactgaaaac gtcggtatga atgccattca agcggcggct
    54601 gaggcattca aggcgatggc ggggattcca tacgtcggcc caattcttgc tgttggtgcg
    54661 gcggctgcgg caatggcggc tgtctacggg ttgatgagcg gaatgggcgg cggcggttcc
    54721 tcaacctcca cgaccacgac gcgcatacca tcggcggcag gcggctggga cattccggca
    54781 ggcatcaacc cgctgacaca actgcacgag aacgagatgg ttctaccggc agaacacgcc
    54841 caaaccatcc gcgaaatggc aggtcagcag ggaggcagcg acagcaccat catcatcaat
    54901 tcgacaggcg gcgacttcat ccataaaaac gatttggcga agctgttgag acagatgaaa
    54961 cgggacttta aatttgtctg agaaaatgcc gtctgaagat tcagacggca ttttttatag
    55021 attcctcaca tattccagca aaagcagcca gcgcgtgtgc ggcatatcgg aatgagtttt
    55081 caaactcatc gctgcctccc atttctgtgc tgttgacaag gtagctcctg caatattggc
    55141 aacctgcttt tgcgtcagcc cgtacttttg ccgtaccgcc ttcaaattgg cgggcgtgta
    55201 gcccagttcc ggattgtcaa tcatcccagc cctccaaagc cgccgcatct tcgttcagca
    55261 tcaaatcatc cgccgcgatt cgatcgcagg cggctttcaa ctgctcaagc cattcctcca
    55321 tgttttcagg tttgttcttg tccaacatga taaagtcaga aagccacaac cctatgcgcg
    55381 aatcataggc aaggcggagc ggctcgccga tttgtcccaa ttctccgtca ataggttttg
    55441 caggtatttc gcctgtaaaa ttgtcgtcaa acgacttacg cgccaaaaaa cgcgggtagc
    55501 acgtatgcac cacaaattcg tcattctcgc cccgcgcttc gccgtgaata atcggtgggt
    55561 actttttgaa gatattgttt ttgctcattt taaacctttc aaaaaagccg ccatatttca
    55621 ggcggcttgt gtcttaaatt ttaaaaatct ctttgccgtt tgctgctgcc aagaagtctt
    55681 tttgtttcag cggcaggctg ttgtattcgc tttcttcaat ttcccatgcg tcgatgttga
    55741 taccggcggt gctttcggca aaggctttca gttttgccag aaattcggtc atcgcgggcg
    55801 attcgtcgtt gaacaagaaa gcgcggtatt gaccgtcaag cgatgcgttg gtggctttag
    55861 cttccaaatg ttcgttgatg atagaaactt cagaattaat aattttggct aattggcgtt
    55921 tttcagtttg agaaactttt tcaaagccgt tgaaagaagt gaagataata gcgcgtttga
    55981 acattttgaa atcctttcgt ttatccttga aaccgtcaag gtggcggcgg caggcttgtt
    56041 gtctgccgat gtgtgtatga tacatcaaaa aatgatgtat cacaagcatt ttttcaaaca
    56101 aaaaaccgcc aatttaataa acctttaaaa acaaaggtaa ttaatttgcc gtttttattt
    56161 ccaatgcaca atgtgcttta tttgcaccat aagaataata aaaatatatt atatattatt
    56221 tttcaatata ttatttttca gtagatacag tcgagcatcg gggcgacgga caggcggcgg
    56281 ggaggaaggg tttgcgtgtt gtcgttcatt gtcgatattt caccattgcg gattcaattt
    56341 caatccggaa caaccttcat ttttggggaa atccgcgtca tgaaagagtc cagcagtatg
    56401 gttaccggcc cgtcgttgca gagcgacacc tgcatatgcg tgcggaaacg ccctgtttcg
    56461 acatgaattc cgtgtccgcg caacagttcc gccgttcgca ggtaaagctg ctgcgcctgt
    56521 tctgcaggtg cggcttgcga aaacgaaggc cgccgcccgc ttgtcgcgtc ggcataaagc
    56581 gtaaactgcg acaccagcag caccgcgccg ccgacatctt tcaaagacag gttcagcttg
    56641 cccgcttcgt cttcaaacac gcgcaaatgg gcgattttgt cggcgatata gcgcgcatct
    56701 ttttctgtgt cactatgcgt tacgccgagc agcacgacga atccgccgtc gattttgcca
    56761 caggtttccg tgccgttttc ggacacgaca tccacctttg cacctaccgt tttctgtatg
    56821 accgcacgca taagccgtcc tccttacctg aacgtgcaat gccgtctgaa aaggcttcag
    56881 acggcatcgg tattggaaat gccattacgg tttgacaccg ttttcttcca aaatggcatc
    56941 gattttcaag cgggcttttt cctgtctcaa accttgttcc aactggtttc tgaccaactc
    57001 gaaaggctgc gcgtcggggt ttttcccgac ctcgctgagt ttgaacagat aatagcgttc
    57061 gcccaatttg accggatcgc gggtaacgtc gccccgattc atcgcggcaa actgcgaagc
    57121 cagcggctcg ggaagctgct gcgccataat gaaaccgtca aaagcctgct cgtcgttcgg
    57181 ataacgcttc atcagccctt caaaagacag ccctttgagc aggagctgct gcgcctgacg
    57241 cgcctcctct tcggttgcga agctgacctg ctgcaatttg atcatgcgga tttgccgctc
    57301 ataaaactga cgcagtgcgc tttcggaaac cgtttccgaa cgttccagaa aacggacgta
    57361 ctcctcggca taaaaagacg cttcggcgat tttaaagcgg ttttggacat ccttatcctt
    57421 atccaaacct tccttcaatg ccctgttttt caaaacttcc aaagtttgca gccgacggac
    57481 ggcatcgttt cggattgcct gcccgtccgg tttttgggac tgctccgcat gccggtctgc
    57541 ctgctgcatg atctgcgcca ccagcgtatc caccaaagcc gggtcgattt cgggtgcttt
    57601 ggctgccgca aaacctgcca acattgcagc aataactgcg gcagcggttt ttttctgttt
    57661 catggtattc cctgtcctgc gcggcggcaa aacgcctgtc tgaacgtctt gccgccatat
    57721 cccgttttca gaattatttt gcaggtttga tgtttgcctt gcccaacagt gcaccgacgg
    57781 cacggtcaat ccgttccgcc tgaaggttgc cggcaatctg tcctttcatt tcatcaaaag
    57841 aaggcacttt tacctcgcgg ctgtcgttga cataataaac gccgtagaaa tcgccgtttt
    57901 tcagcggcgt tgccgtaaat tcgccttttt tcaagtcctt aattgcctga taaagcggcg
    57961 gaacaccctg ttccaaatct ttcagcggca catatccgac cggcgcaccg gtctgtttgg
    58021 tacggtcgtt gagggaatat tgtttcaaga cggcatcgaa accttttttc gccttcaagt
    58081 cggcaaccgc tttttttgca ttttcttcct tgtcggtcag gatttcgccc aactggactt
    58141 cctgcgtacc tttgtaaaaa ccgctgatat tgtcatatgc ggcttttatt tcctgctcgg
    58201 aaaccggttg ggttttggcg atatgcagcg cgtatgcctc gccgttcaag ccatatttta
    58261 ccgcctgcca aacggttttg aaggacggtt tcttgtcgtc gcccgacttt ttcgcttcgg
    58321 cacgcaattt ggcaagcgca tttttaaact ctgccgaccg gtcgagtttc aggcgtttca
    58381 cttcctgtgc gaccacggtg ttgaccactt cgttttccag cagggattgg cgcagttgcg
    58441 gcgtgtcttc ggcacggctg ttttccgcac ggaatgcggc aacctgcgca tcgatgacgg
    58501 aactgtcgat tttctgaccg ttgacggttg ccagcgtttg ggcaaacagg ctgccggaac
    58561 aggcaagcag tgcaacggaa gtcaggattt ttgctttcat aatcttctct ctttaaattt
    58621 taaattgaaa tgttcgggca gacttcattc agtccgccgt atggaaatac tcgtcagggg
    58681 tagccgcccg gatgccgagc gcgtgaatca tgccgcctga aaacaaatct ttgagcagcg
    58741 atttgaccgt tttctggcgg ttcaggcggc ttacgccttc aaaacggccg ctaacgacca
    58801 aaacggcata atgtccgccg ccggtattgc ccgcgtgtcc tttgtgcaga tggctctcat
    58861 cgccgatttc caacaccagc ggatcgagcg tctgcaggcg ttcgcggatc aaatcgacgg
    58921 ccggcattat ttgaacaccg ctttaaacgg cttgatcagc acttcgctgt acacgcctgc
    58981 atgaacatag ggatcgtctt ccgcccacgc ctctgccgca tccaaagact cgaactgcgc
    59041 cacaatcaaa ctgcccgaaa cgcggttgga gtcctccggc aaaggattcg ggcctgccgt
    59101 caacagccgg ccttccgact tcagcgtctc cagccgtttg aggtgttcgg gacgtgccgc
    59161 catacgcgct tcatacacat tctccccgtc tgttgccagc aacataaaat attccacagt
    59221 caatcctcct ttttcagaca ggtactcaga taaataccct gaataataaa gaaaacaagc
    59281 atcagtgcag tcgagccgaa cattttatag ttgacccatt gcgactcgaa ccgggtaaac
    59341 acaaaccagt tggcgatacc cataaaaatc aggaaaccga cccacatata cgtcaatttc
    59401 gcccatacgg catccggaag ctgaatctcc ctgccgatac tcgccttcaa gccgttttta
    59461 ccggcgaggt ggctgcccca caggaacagc gcgcccagcc aaaacaaaac gctcggcttc
    59521 cacataatga agcggctgtc gcccaaaaca atggttgcgc cgccgaatac gacaatcagc
    59581 accagtccga cccactgcat cgtatccagc tttttatatt tccaatacag aaaagccgcc
    59641 tgaaccacac cggcaaccaa ggcaaccgcc gttgcggtaa tcatgttttt ggtaacggta
    59701 taagtggcga aaaacaggat gacggaaaaa aggtcgctga caaatttcat atccaaatga
    59761 gaaagcaaat caaataaacg ctaatcatac aggcagaacc ctgtttttgc acctgcaaaa
    59821 ccgacaaatt ttatttcgga cgatgcaaat atgcacagat gtttttgaaa aaagatgaag
    59881 atatgacata atttgtaaaa ttggctttaa aatacagctt cggccgggac ctctgcctat
    59941 ccgcacccta tcgtccgtat tgccgatgcc tgatgacgaa atttacagac tgtacgcggt
    60001 caaaccgtat tcagccgcca acccacaggg gatacatctt gaaaaacaac agacaaatca
    60061 aactgattgc cgcctccgtc gcacttgccg catcctttca ggcacatgcg ggactgggcg
    60121 gactgaatat ccggtccaac cttgacgaac ccttttccgg cagcattacc gtaaccggcg
    60181 aagaagccaa agccctgcta ggcggcggca gcgttaccgt ttccgaaaaa ggcctgaccg
    60241 ccaaagtcca caagttgggc gacaaagccg tcattgccgt ttcttccgca caggcagtcc
    60301 gcgatcccgt cctggtgttc cgcatcggtg caggcgcgca ggtacgcgaa tacaccgcca
    60361 tcctcgatcc tgtcggctac tcgcccaaaa ccaaatctgc actttcagac ggcaagacac
    60421 accgcaaaac cgctccgaca gcagagtccc aagaaaatca aaacgccaaa gccctccgca
    60481 aaaccgataa aaaagacagc gcgaacgcag ccgtcaaacc ggcgcataac ggcaaaaccc
    60541 ataccgtccg caaaggcgaa acgcttaaac agattgccgc cgccatccgt ccgaaacacc
    60601 tgacgctcga acaggttgcc gatgcgctgc tgaaggcaaa cccaaatgtt tccgcacacg
    60661 gcagactgcg tgcgggcagc gtgcttcaca ttccgaatct gaacaggatc aaagcggaac
    60721 aacccaaacc gcaaacggcg aaacccaaag ccgaaaccgc atccatgccg tccgaaccgt
    60781 ccaaacaggc aacggtagag aaaccggttg aaaaacctga agcaaaagtt gccgcgcccg
    60841 aagcaaaagc ggaaaaaccg gccgttcgac ccgaacctgt acccgctgca aatactgccg
    60901 catcggaaac cgctgccgaa tccgcccccc aagaagccgc cgcttctgcc atcgacacgc
    60961 cgaccgacga aaccggtaac gccgtttccg aacctgtcga acaggtttct gccgaagaag
    61021 aaaccgaaag cggactgttt gacggtctgt tcggcggttc gtacaccttg ctgcttgccg
    61081 gcggaggcgc ggcattaatc gccctgctgc tgcttttgcg ccttgcccaa tccaaacgcg
    61141 cgcgccgtac cgaagaatcc gtccctgagg aagagcctga ccttgacgac gcggcagacg
    61201 acggcataga aatcaccttt gccgaagtcg aaactccggc aacgcccgaa cccgctccga
    61261 aaaacgatgt aaacgacaca cttgccttag atggggaatc tgaagaagag ttatcggcaa
    61321 aacaaacgtt cgatgtcgaa accgatacgc cttccaaccg catcgacttg gatttcgaca
    61381 gcctggcagc cgcgcaaaac ggcattttat ccggcgcact tacgcaggat gaagaaaccc
    61441 aaaaacgcgc ggatgccgat tggaacgcca tcgaatccac agacagcgtg tacgagcccg
    61501 agaccttcaa cccgtacaac cctgtcgaaa tcgtcatcga cacgcccgaa ccggaatctg
    61561 tcgcccaaac tgccgaaaac aaaccggaaa ccgtcgatac cgatttctcc gacaacctgc
    61621 cctcaaacaa ccatatcggc acagaagaaa cagcttccgc aaaacctgcc tcaccctccg
    61681 gactggcagg cttcctgaag gcttcctcgc ccgaaaccat cttggaaaaa acagttgccg
    61741 aagtccaaac accggaagag ttgcacgatt tcctgaaagt gtacgaaacc gatgccgcag
    61801 acgatttgtc cgcattgctt caacctgccg aagcactgtc cgttgaggaa aatataacgg
    61861 aaaccgttgc cgaaacaccc gacttcaacg ccaccgcaga cgatttgtcc gcattacttc
    61921 aaccttctga agtacctgcc gttgaggaaa atgcagcgga aaccgttgcc gatgatttgt
    61981 ccgcactgtt gcaacctgct gaagcaccgg ccgttgagga aaatgtaacg gaaaccgttg
    62041 ccgaaacacc cgatttcaac gccaccgcag acgatttgtc cgcattactt caacctgctg
    62101 aagtacctgc cgttgaggaa aatgcagcgg aaatcacttt ggaaacgcct gattccaaca
    62161 cctctgaggc agacgctttg cccgacttcc tgaaagacgg cgaggaggaa acggtagatt
    62221 ggagcatcta cctctcggaa gaaaatatcc caaataatgc agataccagt ttcccttcgg
    62281 aatctgtagg ttctgacgcg ccttccgaag cgaaatacga ccttgccgaa atgtatctcg
    62341 aaatcggcga ccgcgatgcc gctgccgaga cagtgcagaa attgctggaa gaagcggaag
    62401 gcgacgtact caaacgtgcc caagcattgg cgcaggaatt gggtatttga ttcccaactg
    62461 ccctttcgca gatcaaggat gccgtttcag acggcatctt tttttgcctt atcggtgtaa
    62521 cggataaagt ttgaaccggc acaggctcaa acagcaggtc gacggcaaca aaatgccgtc
    62581 tgaaacccct aaaggcttca gacggcattg gcggcggcgg tatcaggcag tttgataggc
    62641 aaccgaatcg tcaccgcttt tcttttgaat gaattcgatt ttgtatccgt cggggtcttc
    62701 gacgaaggct atcacggttg tgccgtgttt catcgggccg gcttcgcgga cgacgtttcc
    62761 gccctgccgc ttcacacgtt cgcaggcttc gtaggcatca tccacttcaa ccgcgatgtg
    62821 tccgtaggcg ttgcccaagt cgtatcgttc cgtatcccag ttgtgcgtca gttccaaaac
    62881 cgtgctgtcg gtttcatcgc cgtaaccgac gaaggcaagg gtaaatctgc cttcgggata
    62941 atcttttcgg cggagcagtt tcatacccaa aacgttttgg tagaaatcga gggatttttc
    63001 gagattgccc acgcggagca tagtatggag taagcgcatt ttttgtgttc ctttcggtgg
    63061 tggttaaact tcgattttat tcggggtaaa cgtctgccat ttgttgcagg cggggcagtg
    63121 ccagaaaaag acttgggatt tgaagtggca gttgcggcaa cggtacatca cgctgcgctg
    63181 tagctgccgt ccgataaccg aacgcatcat gtcggcatcg gctttccaag ccggattcat
    63241 atcgctgagt ttcaaaccga gcaggcggta cacgccgtta aggtcgggct tgcggcggac
    63301 aagctcgacg gcggtttgcg cggcttcttt ctcgccctta agcagcaggg atttctcgta
    63361 cacgacattg atcaggtcaa gttcgggaaa cgtctgcata tatcctgtca gacggttcaa
    63421 gccttcttca ggttttccct gcgcggcata ggcttcgtaa agcttctcgc cgaccatgct
    63481 caagtatgca tggttttgct gctcgatggc ggcataggct tcgacggcgg cagggaaatt
    63541 gccttgtcgg tgttcgatgt cgcccaaaat catgttggcg cgggtgcatt ttttgttggc
    63601 ttcgagtgcc ttgccgacat tgaaacgcgc ggcatcgaaa ttggacttga acagcgcggc
    63661 ttgggcaagt tcgcaataga actgtgcaat ctcaaactga taggtctgct cgtcatggct
    63721 gagcagccgg gcggtttcaa ccgctttttc ccaatccctg tcctgttggt agatattgag
    63781 caggtgctgt ctggcttcac gcgccatttc accgtcttgc agccccaaaa aaatctgttc
    63841 ggcacggtca accaaccccg cactttgata gttttgcgcc aattcaaata atacgcgcgc
    63901 acgcttggct ccggttgtat cgggagagtc aagcaatgtt tggtgcatat tgatggcttt
    63961 gtcgttttcg ccacgctgac ggtaaagctt gcctagggtg aggttcaggt cgtatgactg
    64021 aggctgctga tcgatgacct ctgccaattc cctggcggca cgtccgctgt tgcggtcaac
    64081 caaggcatcc agacttttat aaaatcccga cggtatgctt tttgcctgct ttaatacagt
    64141 cttcatatcc acgcgggcgg caaaccagcc catcgcgaag aaaacgggca aaaggataat
    64201 cggcagcagg ataatccaca attcattgtc catatcggct ttctcaaggc tgtttggcag
    64261 attcgggcgc attttgcgcc ggtggtgcgg tcagctcctt ccccgtcaaa cgcgcatttt
    64321 tctttacttc ggcacgcaac ctgccgttct cgccacgtaa cgacaacaac cgtccgaaca
    64381 aggcaaacat tccaaaaaca ataccgacta caaatgcgcc gaacaatacg acaatcagcg
    64441 gcaaatcgaa tttttgcccc ggcaggtagg aaaaggtaac ggcatccgta ttaatgacag
    64501 caagcagcag gaagagcagc aggataatga ttttgatgac ggtatagata agtttcatgt
    64561 ttgctccgta aataaaaacg ccgcccggac agcttcgcac tctgaaccaa gattgcgcta
    64621 gtttaaacga tttgcacggt ttcggatagg atgcggcagc gtgttcggac gacatacgga
    64681 gtatgcgatt gccgacaatt ttaccaaata caccgttcct ttccatttga aaaataacgg
    64741 attggacacc gcatcgacag aaaaacccgc cgcgcacttg tcaaaaccct gtttgcaggc
    64801 gtatctttac aatcttcaaa ttcaaaccgt tcattgaaac atatcagaat aagaaaggct
    64861 tttcatcatg agcagacccg tacccgccgt attcggcagc gtttttcaca gtcaaatgcc
    64921 cgtcctcgcc taccgcgaag gcaaatggca gccgaccgaa tggcaatctt cccaagacct
    64981 ctccctcgca ccgggtgcgc acgccctgca ctacagcagc gaatgtttcg agggactgaa
    65041 agccttccgt caggcagacg gcaaaatcgt actgttccgt ccgactgcca acatcgcgcg
    65101 tatgcggcaa agtgcggaca ttttgcacct gccgcgcccc gaaacccaag cctatctcga
    65161 cgcgctaatc gaattggtca aacgcgccgc cgatgaaatt cccgatgcgc ctgccgccct
    65221 gtacctgcgt ccgaccttaa tcggtaccga tcccgttatc ggcaaggccg gttctccttc
    65281 cgaaaccgcc ctgctgtata ttttggcttc ccccgtcggc gactatttca aagtcggctc
    65341 gcccgtcaaa attttagtgg aaaccgaaca catccgctgc gccccgcata tgggccgcgt
    65401 caaatgcggc ggcaactacg cttccgccat gcactgggtg ctgaaggcga aagccgaata
    65461 cggcgcaaac caagtcctct tctgcccgaa cggcgacgtg caggaaaccg gcgcgtccaa
    65521 ctttatcctg attaacggcg atgaaatcat taccaaaccg ctgaccgacg aatttttgca
    65581 cggcgtaacc cgcgattccg tactgacggt tgccaaagat ttgggctata ccgtcagcga
    65641 acgcaatttc acggttgacg aactcaaagc tgcggtggaa aacggtgcgg aggcgattct
    65701 gaccggtacg gcagccgtca tctcgcccgt tacttccttc gtcatcggcg gcaaagaaat
    65761 cgaagtgaaa agccaagaac gcggctatgc catccgtaag gcgattaccg acatccagta
    65821 tggtttggcg gaagacaaat acggctggct ggttgaagtg tgctgatgct ttaaataaaa
    65881 aatgccgtct gaaacccgtt tggcgtttca gacggcattt tcgcatccga accgtttccg
    65941 ccgcacctgc agcaagtcgg cacaaaggca atcggttaaa acaagcgtcc gcatttccca
    66001 tcccgcctgc cgtaagtcgg gcatttctct agaaatacgc ttcagacggc aaaccgccgc
    66061 ccgaaaccga tatgtggcac ggacggcgca cggatttgaa aacggcggat tatccctcgg
    66121 tgctcaaggc attgatgctg taaccgccgt caacgtaagt gatttcgccg gtaatgccgg
    66181 acgacaggtc ggacagcagg aaggcggcgg tattgccgac ttcttcgatg gtaacgttgc
    66241 ggcgcagcgg attgtgggcg gcgacgtgtc ccaagagttt gccgaaatcg gcgatgccgg
    66301 aggcggcgag tgttttgatc ggaccggcgg aaatgccgtt gcagcggatg ccttctttgc
    66361 ccagacaggc ggcggtaaaa cggatgcccg cctcaaggct ggcttttgcc atacccatca
    66421 cgttgtaatt cggaatcgcg cgcaccgcac ccaagtagct cagggcgacg atggcggagt
    66481 ttctgccgcg catcatcgga cgggcggctt ttgccagcgc aggcaggctg tatgcggaaa
    66541 tttcgtgtgc ggtgttgaac gcttcgcggc tgatgctgtc gaggaaatcg ccgctcaagg
    66601 cttctttcgg cgcgaagccg atggaatgca ccaaaccgtc caagccgtcc caatgcttgc
    66661 ccaagtcggc gaacacttgg ttgatttcgt cgtcgctggc gacatcgcaa cggaacacga
    66721 gttcggaatc caattccgcc gccattttgc ggacgcgctc ttccagtttg tccacaacgt
    66781 aggtaaacgc cagttccgcg ccttgttcgc ggcaggcttt ggcgatgccg taagcgatgg
    66841 aacgctcgga aatcatgccg gtaatcagaa tttttttgcc ttgcagaaaa cccattttgt
    66901 atccttcaaa tagtgttcgg ttcattctaa accgttgatt atagcaaatt gtccctgttt
    66961 ctgtgttttc acgttgcagc gtgcaaacgg caatgccgtc tgaagcggat ttcagacggc
    67021 atcggacgtt tcaaatacgg tttaaggcat cagatgccgc gcaacaattc gttcacgctg
    67081 gttttcgcac gggtttgcgc gtccacacgt ttgacgatga cggcgcagta aaggctgtgg
    67141 ctgccgtctt tggaaggcat actgccggac acaacaaccg aacctgccgg tacgcggcct
    67201 tggtagattt cgcctgtggt gcggtcgaag attttggtgg attgaccgat gaacacgccc
    67261 atcgaaatca cgctgccttc ttcgacaatc acgccctcaa cgatttcaga acgcgcaccg
    67321 atgaagcagt tgtcttcaat gatggtcggg ctggcttgca ggggttcgag tacgccgccg
    67381 ataccgacgc cgccactcaa gtgcacgttt ttaccgattt gcgcgcaaga gccgacggtc
    67441 gcccaagtat caaccatcgc gccttcgtcg acgtatgcgc cgatgttgac gtaagacggc
    67501 atcagcacga catttttcgc cacaaagctg ccgcgtcggg caaccgcacc cggaacggcg
    67561 cggaagcctg cgtttttgaa ctcgtcttca gaccagtcgg caaacttggt cggcactttg
    67621 tcgaagtatt tgttcacgcc gtcgttgagg acttcgttgt cttggatgcg gaaggacagc
    67681 aacacggctt ttttcgccca ttcgttgact ttccactcac ccacgcccaa gcgttcggca
    67741 acgcgcagtt tgcctgaatc gagttggcgg atggtttcca acacggcttc tttgacttcg
    67801 ggagtaacgg tggtcggggt aatgtccgcg cggttttcaa aggcggtttc gataatgttt
    67861 tgcaaagaca taatgtttcc ttatgtgaga tgtttcgtgg gacgcttgcc ggtattttca
    67921 agcagtatgt tcatttgaaa tgaatgcgct attgtgccac gcaaacgcat attcgtcagc
    67981 aatacacggg cggttgccga acattggcgt ttcggaatcg ggcgggcggc aggtattgcc
    68041 ttttccgtgc ccgaatcaat acagaacggc ggcggcactt ttatgccgcg ccgccgcctt
    68101 tcagacggca ttcgcggtaa aacgccatca gcccttcggt cgaggcatcg tgtacggacg
    68161 tgccgccttc cagttcgccg atgatggttt tcgccaactg tttgccgtac tcaacccccc
    68221 actgatcgaa ggggttgacg ttccatatcg cgccttggac gaaggttttg tgttcgtaag
    68281 ccgccatcag catacccaaa ttgtagggcg tgaggcggtc gagcaggatg ctgttgctgg
    68341 ggcggttgcc agggaactct ttgtgcggcg caaggcgttc gcgttccgct tcgggcaaat
    68401 ctgccagttc ggcgcgtgct tcgtccaagg ttttgccctt catcagggct tccgcttggg
    68461 caaaggcgtt ggcaacggta aaacggctgc gtccgtcctc cacgccctgc gccgtcaccg
    68521 ggacgataaa gtcgcaggga attaggcgcg tgccttggtg gagcagttgg aaataggcgt
    68581 gctggcagtt gaccccttca ccgccgaaca cgatgccgcc cgttttgcac acggcgggac
    68641 tgccgtctga agcgcggctt ttgcccaaac tctccatatc gagctggttc agccacaccg
    68701 gcagcaggcg caggttgtgg ctgtacggaa cggcggtctg cccgtccgcg tgttggaaat
    68761 tgttatacca cacggcaatc agtgccatca gaacgggaat gttgcggcgc ggcggcgtgt
    68821 ggaaaaaatg gctgtccatc gcgtgcgccc ccgccaacaa ctcgcggaaa cgcgccccgc
    68881 cgaccgcaac catcacgggc aaaccgacgg gcgaccagac ggaatagcgt ccgcccaccc
    68941 agtcgtacat cgcaaacacg cgttccgccg cgataccaaa agccgcagct gccgcagtgt
    69001 cggcagacac cgcgcaaaaa tggcacgccg tttcggattc cgagaacccc gcaccgcgat
    69061 accacgcctt gactgcctgt gcattgagca gggtttccgg tgttttgaag gacttgctgg
    69121 caacgcaaaa cactgtcgtt tcggggttca gacggcataa aaccgcatcc aggcaggcag
    69181 gatcggcgtt ggcggcaaaa tggacggcga tatgccgtct gaacggctcg agtgcctgaa
    69241 cgcacattgc cggcccgagg tcggatccgc ctatgccgat gtggacaaaa tccgtaatcc
    69301 gtttcccagt tatcccctga tacgaaccgt cgtccaaact gtgtgcaaac tccaacgcac
    69361 gatttaactc gcggcggatt tcgggcaaca cgtccctgcc gtccacataa acggcatccg
    69421 caccgtcggg caggcgcaaa gccgtatgca gcgcggcacg cccctcgctg ccgttgactt
    69481 tcgcacccgt ccgcaaagca cgcattttcc cttccaaatc cgccgtctcc gcaagacggc
    69541 agagcagttg cagcgtatct tcgcccaaac ggtttttgct gtaatcgaac aacatcccgt
    69601 ccaaacgctc atgcatacgc tcaaaacggt cgggttcgca ggcaaagcgg tcgcgcaaaa
    69661 ggacatgacg cgtatcctga taatggcgtt cgagcgcata ccatgcacgg gtaaaagcat
    69721 tcatctgttt tccttgattt ttcagaaccg gattaaaatg tagcagaatg tagtttaaca
    69781 aacggcagcg gctttggcga atctccggaa caccgcccgc cgcgtccaat agcaccttat
    69841 ttccatatgg cgaaaatata gtgaattaac aaaaatcagg acaaggcggc gagccgcaga
    69901 cagtacaaat agtatggaac cgattcactt ggtgcttcag caccttagag aatcgttctc
    69961 tcttgagcta aggcgagcca acgctgtacc ggtttttgtt aattcactat accctccggc
    70021 cgacatttga cccgcaacaa tatcctgcaa gatttattgt gtacgcataa atgccggaca
    70081 gccgcctaaa taaggtataa tcgcatccga ttctgtcccg tttgccgccc gcaggcggga
    70141 tgtcggcggt tttcatctta ccgggaacac gccggtactg ttttttaacg atgtttctta
    70201 cattttattc caattacttt acggggctag aatatggcta aaaacggagg attttctttg
    70261 ttcgcaaaga aagaaaaacg ctttatcttt gaaggcaggc attccgcctc cgacaaactg
    70321 gtcaacggcg aagtatccgc gtttaccgaa gaagaggcgc gcaaaaaact ggcaaaacgc
    70381 ggcatccgcc cgttgcagat tacccgtgtg aaaacaagct ccaagcgcaa aatcacacaa
    70441 gaagacatca ccgttttcac ccgccagctg tccacgatga ttaaagcggg cctgccgctg
    70501 atgcaggcat ttgaaatcgt ggcgcgcgga cacggcaacc cgtctatgac ggaaatgctg
    70561 atggaaatcc gaggcgaagt ggaacagggc agctcgttga gccgcgcatt ctcaaaccac
    70621 ccgaaatatt tcgaccgctt ctactgcaac ctggttgcgg caggcgaaac gggcggcgta
    70681 ttggaaagcc tgctggacaa attggcaatt tacaaagaaa aaacccaggc catccgcaaa
    70741 aaggtaaaaa ccgcactgac ctatccggta tccgtcatcg ccgtcgccat cggtttggta
    70801 ttcgtgatga tgattttcgt actgcccgcc tttaaagaag tttacgccaa tatgggcgcg
    70861 gagcttcccg cactgaccca aacagtgatg gatatgtccg actttttcgt ctcatacggc
    70921 tggatggtgc tgatcgcact gggctttgcc atatacggct tccttaaatt gaaggcgcgt
    70981 tcgattaaaa tccaacggcg tatggatgcc atactgctgc gtatgccgat tttcggagac
    71041 attgtccgca aagggacgat tgcccgctgg ggcaggacga cagcgacgct gattgcggca
    71101 ggcgtgcctt tggtcgatgt attggactcc actgccggcg cggcgggcaa tttaatctat
    71161 gaagaagcca cccgggaaat ccgtacgcgc gtcatccaag gtttgtctat gacttcgggg
    71221 atgcgtgcga cggaactgtt ccccaatatg atgttgcaga tgtcttccat cggcgaggaa
    71281 tcgggttctt tggacgatat gctcaacaaa gccgccgaat tttacgaaga cgaggtggac
    71341 aatgcggtcg gcaggctgtc cgctatgatg gagccgatca ttatcgtgat tttaggcttg
    71401 gtcatcggca cgcttctggt cgccatgtat ctgccgctgt ttaatttggg caacgtggtc
    71461 gcctgatttg ccgcacagat ccggcgcgga ttcgctctgc gccggtttgt ttttgttttg
    71521 aatacattga gaacaaaata tgtctgattt gtctgtattg tcgccgtttg ccgtgccttt
    71581 ggcagcggtg ttcgggctgc tggtcggcag tttcttaaac gtcgtcattt accgcgtgcc
    71641 ggtcatgatg gaacgcggct ggacggtatt tgccaaaaaa catttaaacc tgccgctgac
    71701 cgaaaaggaa agccgtacct tcaacctgat gaaaccggat tcctgctgtc ccaaatgccg
    71761 cgtgccgata cgcgcgtggc agaacatccc gattgtcagc tacctgctcc tgcgcggcaa
    71821 atgcgcttcc tgccaaacca aaatcagcat acgttatccc ttaatcgagc tgctgaccgg
    71881 cgtattattc gggctggtcg cctggcaata cggctggtct tggattacat tgggcggttt
    71941 gatactgacc gcgtttctga tttccctgac ctttatcgat gcggacaccc aatacctgcc
    72001 cgactcgatg acactgccct tgatttggct ggggctgata tttaatttgg acggcggctt
    72061 cgtgcctttg cagtctgccg ttttaggtgc ggttgccggc tatggttcga tatggctttt
    72121 atgcgcggta tataaactga ttaaaggcga aatcggtatg ggcaacggag atttcaaact
    72181 gattgccgca ttgggcgcgt ggctcggcat atccgcattg cccgtgctga tttttgtttc
    72241 ctcgctgatc ggtttggtcg cggcaatcgt tatgcgcgtc gccaaggggc agcattttgc
    72301 cttcggcccc gcactgacag tttcgggctg gataattttt acggcaaacg attccgtatg
    72361 gcgggcggtc aactggtggc tgacccatcc ggtgctgtaa gatgacggta tgggtcgggc
    72421 tgaccggcgg aatcggcagc ggcaaatcgg cagccgcgca atgttttgcc gatttgggcg
    72481 tgccgcgcat cgatgcggac gcggcggcgc actcgctgac ggcttcagac ggcatcgccc
    72541 tgccggaaat caggcggctg ttcggcgaca ccgtttttga cacacagggt ttgttgcggc
    72601 gcgacatatt gcgtaaagaa gtctttgcct ccccatcgcg aaaagccttg ctcgaatccg
    72661 tgatgttgcc gctgattttc tcagaaatca aaaaacagca agaaaccttt accgatgcgg
    72721 tttacggcat tgtcgaaatt ccgctgctga cggaaaagcg tcaatttgtc agcctgatac
    72781 ggcgtgtcct gaccataagc gcacctttgg aaaaacgtat cggcagggtg atggcccgca
    72841 gcgggctgac gcgcggcgag gtggcggaca tcatcagcca tcaggcatcc gaatccgaac
    72901 gcctgctgct tgcagacgat gtgctgctca atgacggcag cctcaaaagc ctgtgtgaga
    72961 aaacaatgcg cctgcacgcg ttttattcag ggattttcgc ctcaaaacca acacaaggaa
    73021 aacacaatga ctgaatcgcg gcaaacacgc cttcaagtca aatgtccgac ctgtcaaacg
    73081 gcagtagtat ggaaaccgga aaacgcattc cgccccttct gttcgcaacg ctgcaaactg
    73141 atcgacttgg gcggatgggc agacgggaaa tatacggttt ccagccaaac ggaaagtttg
    73201 ccggaaatat ccgaacccga catggcatac cgctgaccgc cccgccttcc cggcaaacac
    73261 cctgaaagtc aaatgccgtc tgaaacaaac acgcttcaga cggcattttc attctcaaac
    73321 ctaatcgttg gtatttgccg ttacctcttc caatgaagta atgccctgca taactttcaa
    73381 aataccggcc cggcgcaaat ccaccatacc ctccttatag gcaacgtcca aaatatccac
    73441 ttccgtaccg ttgttcataa tcacacgctg catttcttcg ctgatgggca taacctcata
    73501 cacgcccgca cgccccttat aaccctgccc ccggcaacgg tcgcaaccga cggcgcggta
    73561 aagtttccaa tcttttgcaa ggtcctcatc ggtgaagccg acttccttca aagcagaggc
    73621 agacgggcgt tccacttcct gtttgcagct cgaacacagc ctgcgtaaaa gacgctgcgc
    73681 cataatcagg ctgaccgaac tggcaatatt aaacggcgcg acacccatat tcagcatacg
    73741 cgacaacgtc gccggcgcat tattggtgtg cagggtggaa aacaccatat gccctgtttg
    73801 tgccgcctta atcgcaatat cggcagtttc caaatcacga atctcaccga ccataatgat
    73861 gtccgggtcc tgacgcagga aagacttcaa agcagcggca aaagtcaggc cctgcttatc
    73921 attgacgtta acctgattga tgcccggcag gttaatctcg gcagggtctt ccgccgttgc
    73981 aatatttacc gactccgtat tcaaaatatt caaacaggta tagagcgaca ccgtcttacc
    74041 cgaacccgtc ggaccggtta ccagcaccat cccgtaggga cggtgaatcg cttccaacaa
    74101 caattttttc tgaaacggct caaaaccgag ctggtcgatg ttcaaagacg cggcatcgga
    74161 attcaaaatc cgcatcacga ccttttcgcc aaacagcgtc ggcaatgtgc tgacacggaa
    74221 atcgacaggc ttgccgccct tttgaaaggt cagctgcatc ctgccgtcct gcggtatccg
    74281 tttttcggaa atgtccaaac gcgacattac cttaatccgg gaagcaagct gcccccttac
    74341 cgcaatgggc ggctgaacca cctcgcggag ctgcccgtcc acacggaaac ggatacgggc
    74401 attgtgttcg taaaactcga aatggatgtc cgatgccccg ctgcgcaagg catccgacaa
    74461 agtcttatgg ataaacctcg gaacagggcc atcttctgcc tcctcgttgt cgatatacag
    74521 ggtgtggctt tcctcttcct cctgcccctc cccaagctcc tgaagcagcg atgtcgaacg
    74581 cgaacccacc caatcgagca aacccgccaa ctggtcatcc tcgacaatga ccaactcaac
    74641 ctcaatccct gcggcagaaa cggttttctg aatttgcggc atctgtgtcg gatcggaaac
    74701 cgcaaaaaat actttgtcgc cccgacggaa aaccggcaca cagtggaact ccaccatctg
    74761 ctcctccgtc aacaccccca tcagcaccct gtggcgcgga taatgacgca aatcaagaat
    74821 cgaataactg aacaccctcg caatcaatgc cgcaagcgac ttgggcgaaa tgacaccgtc
    74881 tgaaaacagc atcggcaaca cttccttacc cgcctgcgac tcattgtagt aatgctcggc
    74941 ctgctcaaca gtaaccacct ggttttgaac cagaatcctc agcaaaccta cgctcatacg
    75001 accttatccc caaatttatt cattgttata cctgtac
//
LOCUS       DAWITQ010000002        51277 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.002, whole genome shotgun sequence.
ACCESSION   DAWITQ010000002 DAWITQ010000000
VERSION     DAWITQ010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 51277)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 51277)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..51277
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.002"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(38..598)
                     /locus_tag="WIX18_000093"
     CDS             complement(38..598)
                     /locus_tag="WIX18_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237267.1"
                     /translation="MTANFAQTLVEIQDSLYRVVSTVQYGDDNLKRLTADKRKQYELN
                     FKISEGSTRVESDFKETLVRFGRDMLQDMPPKIRSATLVALTTLLVGGALGYGYLEYL
                     KQVASEGYQTERLYNAVDRLAESQERITSAILKGARGADFVQIGRRSYSREDISEANR
                     RAERVPYGAELVSDGNFTAVLSDIGD"
     gene            complement(516..703)
                     /locus_tag="WIX18_000094"
                     /pseudo
     CDS             complement(516..703)
                     /locus_tag="WIX18_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229271.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(711..1103)
                     /locus_tag="WIX18_000095"
     CDS             complement(711..1103)
                     /locus_tag="WIX18_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ5237268.1"
                     /translation="MGKRMTFDTAKSRFQEKFPHLELLEFSGIYKPSSVRCPTHGVVQ
                     LLYYDTAIKSKYGCPECGKLKMKENTPPQNQKPVSILDTATGETLTFPSVQAAAKALN
                     TPYGSIRTKLDGRSNPDNLVCNRYKVLL"
     gene            complement(1311..1703)
                     /locus_tag="WIX18_000096"
     CDS             complement(1311..1703)
                     /locus_tag="WIX18_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ5237269.1"
                     /translation="MAKSFNQAASELTDIFPNISLTGFDGVNYPVTVNCPMHGNVRYS
                     TFNALIKSKYGCPECAKMSKTQTPPNVGKPLLILDTTTNETLTFPSVTAAGAALGVHF
                     QQINHRLKGRTSPDNLISNRYKVLGYDR"
     gene            complement(1820..2230)
                     /locus_tag="WIX18_000097"
     CDS             complement(1820..2230)
                     /locus_tag="WIX18_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ5237270.1"
                     /translation="MALTFTQAVSKLTSKFPHLNLVEFNGVRYPTVIVCPIHGRVTCS
                     TFKSMLDSKSGCPKCASYGVNSHKIPEDTIDKLSKNTVLEDTVTGETLTFPSRASAAR
                     SLGINPAAITDRIKGRVHTETLLAGRYKVHICTK"
     gene            complement(2244..2681)
                     /locus_tag="WIX18_000098"
     CDS             complement(2244..2681)
                     /locus_tag="WIX18_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ5237271.1"
                     /translation="MKISIFWLYNAFILERSIMPKSLSLQDVQLRFSSKFPDKTVLKF
                     TKNYEPVTIQCPLHGSVVYGNLQAAMKSSTGCPECTRNPEKPSPNAVAIRLEDTETGE
                     IYEFASTLAASKFIGCSNSTLAVRLSGRTPFDRLIRYRYRLVK"
     gene            complement(3092..4390)
                     /locus_tag="WIX18_000099"
     CDS             complement(3092..4390)
                     /locus_tag="WIX18_000099"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEZ5237272.1"
                     /translation="MAKNVVVIGAQWGDEGKGKIVDWLAEEAGGVVRFQGGHNAGHTL
                     VVGGKKTILRLIPSGILHESLDCFIGSGVVVSPEALLGEIDELNAAGVKNVEGRLKIA
                     PTCPLILPYHIALDQAREASRGKGKIGTTGRGIGPAYEDKVARRAIRAADLLHPEKLR
                     EKLDAILAYYNVQLQHLHNAEPVKAEDVMAVIEKVALRIAPMITDVSRVLNEKNKNGE
                     KLLFEGAQGALLDIDYGTYPFVTSSNCLAGAASAGAGVGPQMLDYVLGIVKAYTTRVG
                     SGPFPTELFDEVGAGLAERGHEFGSVTGRARRCGWFDAAALKRSIQINGISGMCITKL
                     DVMDGVETINICVGYELPDGGKTDILPCGSDAVETCKPIYETMEGWKESTFGIKNYEE
                     LPDNAKAYLKRIEEVCGAPVAIVSTGPDREETIVLHHPFA"
     gene            complement(4494..5645)
                     /locus_tag="WIX18_000100"
     CDS             complement(4494..5645)
                     /locus_tag="WIX18_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HEZ5237273.1"
                     /translation="MQTWQLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPL
                     MEYAHSLLTHIDAGLSLKTILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRL
                     CYAGPVLHAQSDGLLNMREPLQAGAEMYGFADIRGDIELIDLMLKSMKIADMGKVLLS
                     LGHIGIFRALSDAAHLDAGQSATLLALMQDKDTETVEAQVKAWKLDGMWAKAFSLLPR
                     LYGGREVLSDARGRLPDLSAVGGALGELQAVCDAFPDCEIHIDLSELRVDNYHTGLLY
                     AAYAADFHDAVARGGRYDGLGGYFGRARPATGFSFDLRSFIGRLPTSERQPAVLVDAE
                     DAEAAREAVEALREQGQCVVIDYGIGHNVSEELAGRLKKTDGVWQVVKR"
     gene            5980..7359
                     /gene="norM"
                     /locus_tag="WIX18_000101"
     CDS             5980..7359
                     /gene="norM"
                     /locus_tag="WIX18_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter NorM"
                     /protein_id="HEZ5237274.1"
                     /translation="MLLDLNRFSFSVFLKEVRLLTALALPMLLAQVAQVGIGFVDTVM
                     AGGAGKEDLAAVALGSSAFATVYITFMGIMAALNPMIAQLYGAGKTDEVGETGRQGIW
                     FGLFLGVFGMVLMWAAITPFRNWLTLSDYVEGTMAQYMLFTSLAMPAAMVHRALHAYA
                     SSLNRPRLIMLVSFAAFVLNVPLNYIFVYGKFGMPALGGAGCGLATMAVFWFSALALW
                     IYIAKENFFRPFGLTAKFGKPDWAVFKQIWKIGAPIGLSYFLEASAFSFIVFLIAPFG
                     EDYVAAQQVGISLSGILYMIPQSVGSAGTVRIGFSLGRREFSRARYISGVSLVSGWML
                     AVITVLSLVLFRSPLVSMYNNDPAVLSIAATVLLFAGLFQPADFTQCIASYALRGYKV
                     TKVPMFIHAAAFWGCGLLPGYLLAYRFDMGIYGFWTALIASLTIAAIALVWCLELCSR
                     EMVRSHKAV"
     gene            7537..8577
                     /gene="murB"
                     /locus_tag="WIX18_000102"
     CDS             7537..8577
                     /gene="murB"
                     /locus_tag="WIX18_000102"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HEZ5237275.1"
                     /translation="MQPIRYRTDLTPYNTFGLRAQARAFIALEHADGLRDIVRLPEFN
                     RDTVLWLGGGSNILLMEDYAGLVVHMENKGIREIARSDGMVLIEAQAGEIWHDFVLHA
                     VALGLNGLENLSLIPGTVGASPVQNIGAYGVEAKDVIHSVRCFDLDTETFVTLSNADC
                     RFAYRESLFKQEGKGRYVIVSVVFALKTHFVPNLGYGDLAAAVAELSAGRVPTAKDVS
                     DAVCAIRNSKLPNPNVLGNVGSFFKNPVVSAEKAATLLQRHPDMPRYPQPDGSVKLAA
                     GWLIDQCRLKGFQIGGAAVHDRQALVLVNKNNASANDVRQLAQHIKFTVFARFQVELH
                     AEPNWLPASFSL"
     gene            8589..9239
                     /locus_tag="WIX18_000103"
     CDS             8589..9239
                     /locus_tag="WIX18_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEZ5237276.1"
                     /translation="MPVTRPAKINTYTRIIDASLALFNEEGERNISTNHIAAHLGISP
                     GNLYYHFRNKDEIIVQLFKRYSEALLEYLNEAVLPSDVEDSINYMAGIYDVMWEYRFL
                     FSDVNTLLARSAELLGEHNTFTQAKVSPLLVNLLTQLNGLNIIQADQTAMNDLAVNMW
                     MITKYWFDFDSSLRGRTKLTEDSKARGVRRTLSLLRPYLLPEHREKYDRKIGNGNP"
     gene            9294..10070
                     /locus_tag="WIX18_000104"
     CDS             9294..10070
                     /locus_tag="WIX18_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEZ5237277.1"
                     /translation="MRAVPPPHISITGLGYLGLPLAQKFYQHGSRVAAIKRSLTSDDI
                     NLPIHLDTFDLGSTDAFQTALWRHHADKPVWFFLLPPSSLTHYADTVKQWAELARACN
                     VQHLIFTSSTSVYGDTARECDETATPDPQTESARQILAAEQHLLDSGISNIDILRLGG
                     LYCAERHPVSRLVQKQNIPGGNRPINIVHRNIAVESLFQTAFNPGGRRLKNIIEPRHP
                     TRREFYTEEAAKLGLPALDFAPDDSVGKIIRTVCDNGLSL"
     gene            10121..10687
                     /locus_tag="WIX18_000105"
     CDS             10121..10687
                     /locus_tag="WIX18_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 domain-containing protein"
                     /protein_id="HEZ5237278.1"
                     /translation="MSALLPIINRLILQSPDSRSELAAFAGKTLTLNIAGLKLAGRIT
                     EDGLLSAGNGFADTEITFRNSAVQKILQGGEPGAGDIGLEGDLILGIAVLSLLGSLRS
                     RASDELARIFGTQADIGSRAADIGHGIKQIGRNIAEQIGGFSRESESANIGNEALADC
                     LDEISRLRDGVERLNERLDRLERDIWID"
     gene            10707..11597
                     /locus_tag="WIX18_000106"
     CDS             10707..11597
                     /locus_tag="WIX18_000106"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HEZ5237279.1"
                     /translation="MNSPFHNIGIVTRPNTPDIQDTAHTLITFLKQHGFTVYLDEVGI
                     KEGCIYTQDTVGCHIVNKTELGQYCDLVAVLGGDGTFLSVAREIALRAVPIIGINQGH
                     LGFLTQIPREYMTDKLLPVLEGKYLAEERILIEAALIRESKTAERAIALNDAVLSRGG
                     AGQMIEFEVFVNREFVYTQRSDGLIVSTPTGSTAYSLAAGGPIMQAGLHAFTLVPICP
                     QSMTNRPIAIPDTSEIEILVTQGGDARVHFDGQTHIDVQNLDRITIRRYRNPLRILHP
                     TDYQYFKTLRQKLHWGEQLV"
     gene            11622..12380
                     /locus_tag="WIX18_000107"
     CDS             11622..12380
                     /locus_tag="WIX18_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEZ5237280.1"
                     /translation="MNPKTPPDHTEDAVRLSKRMAQLGLCSRREADGYIEQGWVTVNG
                     KTAVLGQKVSPADRIELNKKAHEQQAARITILLNKPVGYVSAQAEKGYKSAAELITPE
                     NHWEGDTSRIRFDPKHKIGLAPAGRLDIDSVGLLVLTQDGRIAKQLIGENSGSEKEYL
                     VRVRGKLDEKGLALLNHGLSLDGEKLRPAQVEWQNEDQLRFVLKQGKKRQIRRMCELV
                     GLRVVGLKRIRMGKVKLGRLPPGKWRYLAPGESF"
     gene            complement(12435..13100)
                     /locus_tag="WIX18_000108"
     CDS             complement(12435..13100)
                     /locus_tag="WIX18_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEZ5237281.1"
                     /translation="MTVLSKEQVLSAFKNRKSCRHYDAARKISAEDFQFILELGRLSP
                     SSVGSEPWQFVVVQNPEIRQAIKPFSWGMADALDTASHLVVFLAKKNARFDSPFMLES
                     LKRRGVTEPDAMAKSLARYRAFQADDIKILDDSRALFDWCCRQTYIALGNMMTGAAMA
                     GIDSCPVEGFNYADMERVLSRQFGLFDAAEWGVSVAATFGYRVQEIATKARRPLEETV
                     IWA"
     gene            complement(13301..14197)
                     /locus_tag="WIX18_000109"
     CDS             complement(13301..14197)
                     /locus_tag="WIX18_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE2"
                     /protein_id="HEZ5237282.1"
                     /translation="MQLLKASDIISHLQIDGIFPGGNAIPCTHLNNYMNIKEKQLMNT
                     IADVQSSRDLRNLPINQVGIKDLRFPITLQTAEGIQSTVARLTMTVYLPAEQKGTHMS
                     RFVALMEQHTEALDFAQLRRLTAEMVALLDSRAGKISVSFPFFRKKTAPVSGIRSLLD
                     YDVSLTGEIKDGAYGHSMKVMIPVTSLCPCSKEISQYGAHNQRSHVTVSLTADAEVGI
                     EEVIDYVEAQASCQLYGLLKRPDEKYVTEKAYENPKFVEDMVRDVATSLIADKRIKSF
                     VVESENFESIHNHSAYAYIAYP"
     gene            14266..15423
                     /locus_tag="WIX18_000110"
     CDS             14266..15423
                     /locus_tag="WIX18_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HEZ5237283.1"
                     /translation="MKFATKAIHSSYDCDEHNRALMPPIYQNSMFALHEIGENVPYRY
                     SRLSNPTRQILEDTVADLEHGAAGFAFSSGMAGIDAVWRTFLQPGDTIVAVADIYGGA
                     YDLLVDVYQKWGVNVVFADLGNPDNLDELLKAHKVKLVWLETPSNPLLRLVDIKALAA
                     KAKAAGALVGIDNTFATPYLQQPLDMGCDFVFHSATKYLCGHSDVLMGIVVAKTKELA
                     QPLHDMMVHTGAVAGPMDCWLVLRGIKTLALRMNAHYQNALEIARRLEAHPAIEKVFH
                     PGLPSHEHYELAKTQMPKGIGGVVTVYLKNDTREAANSVIKNMKLVKMASSLGGVESL
                     VNHCYSQSHSGVPHNVKMEMGIRVGLLRFSVGIEDVDDIWNDISAALDTTL"
     gene            complement(15486..16487)
                     /gene="hemB"
                     /locus_tag="WIX18_000111"
     CDS             complement(15486..16487)
                     /gene="hemB"
                     /locus_tag="WIX18_000111"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEZ5237284.1"
                     /translation="MQFPYRNVPASRMRRMRRDDFSRRLMREHTLTADDLIYPVFVLE
                     GSAREEDVPSMQGVKRQSLDRLLFTAEEAVKLGIPMLALFPVVTANKTERAQEAYNPE
                     GLVPSTVRALRERFPELGIMTDVALDPYTVHGQDGLTDENGYVMNDETVEVLVKQALC
                     HAEAGAQVVAPSDMMDGRIGAIREALEDAGHIHTLIMAYSAKYASAFYGPFRDAVGSS
                     GNLGKADKKTYQMDPANTDEALHEVALDIQEGADMVMVKPGLPYLDVVRRVKDEFGVP
                     TYAYQVSGEYAMLQAAVANGWLDGDKVVLESLLAFKRAGADGILTYYAIEAAKMLKR"
     gene            complement(16670..16954)
                     /gene="yhbY"
                     /locus_tag="WIX18_000112"
     CDS             complement(16670..16954)
                     /gene="yhbY"
                     /locus_tag="WIX18_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HEZ5237285.1"
                     /translation="MTDTKLNTKEILELKARAHHLHPVVMVGQQGLTDAVIKETDAAL
                     TAHELIKVRVFGDDRAERIEICTALCEAVDAQPVQHIGKLLVLWRKNIEG"
     gene            17064..17684
                     /locus_tag="WIX18_000113"
     CDS             17064..17684
                     /locus_tag="WIX18_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HEZ5237286.1"
                     /translation="MAVRSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINEKD
                     KLIKPGTVLADLGSAPGSWSQVAAKLTGTSGAVFALDILPMEAIGGVSFIQGDFREND
                     VLAQFETLLDNRPLDLVICDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFL
                     VKVFQGAGYQEYMAAMREIFGTVQTRKPEASRNRSSEIYLLGKNKR"
     gene            17748..19715
                     /gene="ftsH"
                     /locus_tag="WIX18_000114"
     CDS             17748..19715
                     /gene="ftsH"
                     /locus_tag="WIX18_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEZ5237287.1"
                     /translation="MGNTFKSILVWVALGIGLMAAFNALDGKKEDNGQIEYSQFIQQV
                     NNGEVSGVNIEGSVVSGYLIKGERTDKSTFFTNAPLDDNLIKTLLDKNVRVKVTPEEK
                     PSALAALFYSLLPVLLLIGAWFYFMRMQTGGGGKGGAFSFGKSRARLLDKDANKVTFA
                     DVAGCDEAKEEVQEIVDYLKAPNRYQSLGGRVPRGILLAGSPGTGKTLLAKAIAGEAG
                     VPFFSISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRQRGAGLGGGN
                     DEREQTLNQLLVEMDGFESNQTVIVIAATNRPDVLDPALQRPGRFDRQVVVPLPDIRG
                     REQILNVHSKKVPLDESVDLLSLARGTPGFSGADLANLVNEAALFAGRRNKVKVDQSD
                     FEDAKDKIYMGPERRSMVMHEDEKRATAYHESGHAIVAESLPFTDPVHKVTIMPRGRA
                     LGLTWQLPERDRISMYKDQMLSQLSILFGGRIAEDIFVGRISTGASNDFERATQMARE
                     MVTRYGMSDKMGVMVYAENEGEVFLGRSVTRSQNISEKTQQDIDAEIRRILDEQYQIA
                     YKILDENRDKMETMCKALMEWETIDRDQVLEIMAGKQPSPPKDYSHNLRENADAAEDN
                     APHAPTREETEAPAPADTASTESEQQPENKA"
     gene            19937..20368
                     /locus_tag="WIX18_000115"
     CDS             19937..20368
                     /locus_tag="WIX18_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HEZ5237288.1"
                     /translation="MKKVEKNILVLHGADKMFELVDKVEDYPHFLPWYSKTEVIGRSG
                     NELKARLFMDYMHVRQSFATHNRNIPGREIRMELLEGPFKTLRGTWKFIDLGDDMCKI
                     EFNLEYDFSNAVLSALISPVFNHLSATLVEAFVKEADRRYA"
     gene            20361..20639
                     /locus_tag="WIX18_000116"
     CDS             20361..20639
                     /locus_tag="WIX18_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HEZ5237289.1"
                     /translation="MLEIEIVYGLPDRQVLKTMQLAEGTTVRAAALQSGLDGIFEDLN
                     LHSAPLGIFGKAVKDDTPLRDGDRIEVYRPLLIDPKEARRKRVQNQEE"
     gene            20692..21270
                     /gene="pth"
                     /locus_tag="WIX18_000117"
     CDS             20692..21270
                     /gene="pth"
                     /locus_tag="WIX18_000117"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HEZ5237290.1"
                     /translation="MSNKIKMLVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEE
                     KKFFGEVARAALPDGDVWLLKPATFMNRSGQAVAALAQFYKIKPEEILVVHDELDIPC
                     GRIKFKLGGGNGGHNGLKDIQAKLGTADYYRLRLGIDHPGDRNLVVGYVLNKPSTEHR
                     RQIDDAVAKSLQAIPDILAGKWEEATRFLHSK"
     gene            21331..21537
                     /locus_tag="WIX18_000118"
     CDS             21331..21537
                     /locus_tag="WIX18_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HEZ5237291.1"
                     /translation="MTELKQLIQTESIPVIEETLDFLLYECSIDDAPSAEEVAQWRDI
                     LAARGGKFLRLSKICQTWLDEEAA"
     gene            21534..21896
                     /locus_tag="WIX18_000119"
     CDS             21534..21896
                     /locus_tag="WIX18_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HEZ5237292.1"
                     /translation="MKLPRNRFSLLSALWFAGGIYSLLFKAADTAPPPFPHFDKAAHL
                     ALFFAQIWLLTKAFKTGKLPIPYRSLMVFALCFALFSECAQAWFTATRTGSLGDVLAD
                     MAGTVLALFAARAADRPD"
     gene            22127..23542
                     /locus_tag="WIX18_000120"
     CDS             22127..23542
                     /locus_tag="WIX18_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HEZ5237293.1"
                     /translation="MNLHAKDKTQHPENVELLSAQKPITDFKGLLTTIISAVVCFGIY
                     HILPYSPDANKGIALLIFVAALWFTEAVHITVTALMVPILAVVLGFPDMDIKKAMADF
                     SNPIIYIFFGGFALATALHMQRLDRKIAVSLLRLSRGNMKVAVLMLFLVTAFLSMWIS
                     NTATAAMMLPLAMGMLSHLDQEKEHKTYVFLLLGIAYCASIGGLGTLVGSPPNLIAAK
                     ALNLDFVGWMKLGLPMMLLILPLMLLSLYVILKPNLNERVEIKAESIPWTLHRVIALL
                     IFLATAAAWIFSSKIKTAFGISNPDTVIALSAAVAVVVFGVAQWKEVARNTDWGVLML
                     FGGGISLSTLLKTSGASEALGQQVAATFSGAPAFLVILIVAAFIIFLTEFTSNTASAA
                     LLVPIFSGIAMQMGLPEQVLVFVIGIGASCAFMLPVATPPNAIVFGTGLIKQREMMNV
                     GILLNILCVVLVALWAYAVLM"
     gene            23661..24170
                     /locus_tag="WIX18_000121"
     CDS             23661..24170
                     /locus_tag="WIX18_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEZ5237294.1"
                     /translation="MIILHTNKGDIKIELDFDKAPVTAKNFEQYVKDGFYDGVIFHRV
                     IKGFMIQGGGMDENMNEKETRDPIQNEASNGLPNDKYTIAMARTSDPHSASAQFFINT
                     ADNAFLNFRSKELYGKTVVQDWGYAVFGKVVDGFDVVDAIEGVSTKRHGYHDDVPSEP
                     VVIIKAEAV"
     gene            24333..25715
                     /locus_tag="WIX18_000122"
     CDS             24333..25715
                     /locus_tag="WIX18_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HEZ5237295.1"
                     /translation="MANIARDIFKAYDIRGIVGKTLTDDAAYLIGRAIAAKAAEKGMT
                     RIALGRDGRLSGPELMEHIQRGFTDSGIDVLNVGMVATPMLYFAAINECGGSGVMITG
                     SHNPPDYNGFKMMLGGDTLAGEAIQELLAIIEKDGFVAADKQGNVTEKDISGEYHNHI
                     VGHIKLKRPMNIAIDAGNGVGGAFAGKLYKGLGNEVTELFCDVDGNFPNHHPDPSKPK
                     NLQDLIAALKNGDAEIGLAFDGDADRLGVVTKDGNIIYPDRQLMLFAQDVLSRNPKAK
                     VIFDVKSTRLLAPWIKEHGGEPVMEKTGHSFIKSSMKKTGAPVAGEMSGHIFFKERWF
                     GFDDGLYAGARLLEILSASDNPSEVLNNLPQSISTPELNIALPEGSNGHQVIDELAAK
                     AEFEGATEIITIDGLRVEFPDGFGLMRASNTTPILVLRFEADTQEAIERIQNQFKAVI
                     ESNPNLIWPL"
     gene            complement(25735..26490)
                     /locus_tag="WIX18_000123"
     CDS             complement(25735..26490)
                     /locus_tag="WIX18_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEZ5237296.1"
                     /translation="MIKIRNIHKTFGENTILRGIDLDVGKGQVVVILGPSGSGKTTFL
                     RCLNALEMPEDGQIEFDNERPLKIDFSKKPSKHDILALRRKSGMVFQQYNLFPHKTAL
                     ENVMEGPVAVQGKPAAQAREEALKLLEKVGLGDKVDLYPYQLSGGQQQRVGIARALAI
                     QPELMLFDEPTSALDPELVQDVLNAMKELAREGWTMVVVTHEIKFALEVATTVVVMDG
                     GVIVEQGSPKELFDHPKHERTRRFLSQIQSTKI"
     gene            complement(26500..27216)
                     /locus_tag="WIX18_000124"
     CDS             complement(26500..27216)
                     /locus_tag="WIX18_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEZ5237297.1"
                     /translation="MFNNFLASLPFMTETRADMIVSAFLPMVKAGFAVSLPLAAASFV
                     IGMVIAVAVALVRIMPAGGIARKILLKLVEFYISVIRGTPLLVQLVIVFYGLPSVGIY
                     IDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAF
                     RVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFC
                     KVLFLIQARLEKRFDRYVAK"
     gene            complement(27206..28033)
                     /locus_tag="WIX18_000125"
     CDS             complement(27206..28033)
                     /locus_tag="WIX18_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ5237298.1"
                     /translation="MMLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAVSGSLIER
                     INNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVKVEFKETQWDSMMA
                     GLKAGRFDVVANQVGLTSPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTA
                     QSLTSNYGEKAKAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGV
                     KIVWSAPADEKVGSGLIVNKGNDEAVAKFSTAINELKADGTLKKLGEQFFGKDISVQ"
     gene            28318..29226
                     /locus_tag="WIX18_000126"
     CDS             28318..29226
                     /locus_tag="WIX18_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dyp-type peroxidase"
                     /protein_id="HEZ5237299.1"
                     /translation="MNTPQSAIIPDHAQAGIFIEADFAANRLNDIKAACRASLDALTA
                     LKARFPDDILGLTIAFGSKAWATFGHTDEGSEIKPFSEMGNGLAPSTQHDMSIHIQSF
                     RQNAAYALAQSVLGAFGDSICVASEEHGLRLYQDRGLDGFVDGTENPQGDENVREVAI
                     IPEGKPDAGGSYVLLQKYLHDLKKWDAVPVAEQEASVGRGKETDDEFGRDVRLPDSHL
                     GRVNLKENGVGLKIVRRSLPFGKISGEHGLMFTAYCRTLHNIEAQLLSMFGDTDGKTD
                     LLLRHLSAAVSGGYYYAPSVERLQNL"
     gene            29306..32920
                     /gene="recB"
                     /locus_tag="WIX18_000127"
     CDS             29306..32920
                     /gene="recB"
                     /locus_tag="WIX18_000127"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HEZ5237300.1"
                     /translation="MSAPIQAFDPLTVPIAGTNLIEASAGTGKTYGIAALFTRLIVLE
                     QKNVERVLVVTFTKAATAELKTRLRARLDDVLQVLESKEIAKLGDDTLSDGIAAYCAE
                     HHKGDTFLPALLKQALQKEGRTRLIVRLKAAIGQFDNAAIYTIHGFCQRILRDYAFLC
                     QAPFDVELTEEDGDRLLIPAQDFWRERVSNDPVLAALAFKRKAVPQTVLAQISRYLSR
                     PYLNFRRPQADLKQAQRNAETSWQTICRLLPELEAGFWRIHPDLNGNSYRKNSFGNLF
                     KELAQKSAAGQLPFLDKDTHDRLLKLASDKLEAALKKGKTPDAAAFAELQKLADFGRD
                     LNALEEAEEATMIRLQLDLIGYLNRSLAEMKKSRRERGFDDLLLDVHTALTDNPHAET
                     LARAVAENWETALIDEFQDTDPLQYEIFQKIFIAQNRPLFLVGDPKQAIYSFRGADIY
                     AYLQAAGDARHRYTLATNYRSHAALIGSIGALFRLKERPFVLENIGYSEVGAARAESR
                     LSPERPAVQVRWLHENDNEKANKDVLRRRAADYCADEIAHALNEAAGGRLNFKGCPLQ
                     SGDIAVLVRTHNEAVMVSAALKKRQVQSVLLSRESVFASPEAAALSALIGFWLEPRRA
                     GTLRFVLTSGIFGYDAQQLHDFNQNESEILHWAESARTALDNWNQYGIFAAMQQFSQT
                     HGIETRLLSRNNGRSLTNYFQLLELLAAEDAQNRNPAALHKWLRDQISLAGNNSGDNR
                     AIRLESDEDLVKIVTMHASKGLQYPLVYCPFAWDAQDTGPSDWQILHQSANRTELLAK
                     AQLSEDEQKQYADEEMAERLRLLYVALTRAEEQLNIYAAYSTNTADNPLAYLIEGSPQ
                     DSRETVRRAYACEKDGIAMLKRNWRRVADNAPSGTNFAFTENAPPPAAYRSNAGQTAE
                     FAANSIPERGFRFVRHTSFTALSRHTQTPDGGEEDACPSLDAAETSVPAMPSETPTAS
                     DGISIHDFPKGTQAGLCLHEILEDFKFGQAAAGQETLIADKLKKYGFEEIWLPAVAEM
                     AEACRKTPLTGAYDLSDISPECRCPEMGFTLHTEDFSLKRLRDWFARDDIRLPEVCRA
                     AAETLDFHTVNGFLNGFVDMVCQDPDGNICVIDYKSNHLGTDASAYTQQAMDEAVAHH
                     HYYLQALIYAVAAARYFKLRGQPPAAVSVRYLFLRGLDGKGGGVWRWDIDAAALEQIK
                     "
     gene            32959..33318
                     /locus_tag="WIX18_000128"
     CDS             32959..33318
                     /locus_tag="WIX18_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEZ5237301.1"
                     /translation="MNIKHLITAALIASAAFAAQAAPQKPVSAAQTAQHPAVWIDVRS
                     EQEFSEGHLHNAVNIPVDQIVRRIHEAAPDKDTPVNLYCRSGRRAEAALQELKKAGYT
                     NVANHGGYEDLLKKGMK"
     gene            33560..34039
                     /locus_tag="WIX18_000129"
     CDS             33560..34039
                     /locus_tag="WIX18_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HEZ5237302.1"
                     /translation="MKHILPLIAASALCISTASAHPAGKPPTQNETAMTTHTLTSKYS
                     FDETVSRLETAIKSKGMNIFAVIDHQEAARRNGLTMQPAKVIVFGTPKAGTPLMVKDP
                     AFALQLPLRVLVTETDGKVRAAYTDTRALIAGSRIGFDEVANTLANAEKLIQKTVGE"
     gene            complement(34110..35489)
                     /gene="radA"
                     /locus_tag="WIX18_000130"
     CDS             complement(34110..35489)
                     /gene="radA"
                     /locus_tag="WIX18_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HEZ5237303.1"
                     /translation="MAKTLKTLYQCTECGGTSPKWQGKCPHCGEWNTLQESLAAPEPK
                     NARFQSWAADTSTVQSLSSVTATEVPRNPTGMGELDRVLGGGLVDGAVILLGGDPGIG
                     KSTLLLQTIAKMAQSRKVLYVSGEESAQQVALRAQRLELPTEGVNLLAEIRMEAIQAA
                     LKQHQPEVVVIDSIQTMYSDQITSAPGSVSQVRECAAQLTRMAKQMGIAMILVGHVTK
                     DGAIAGPRVLEHMVDTVLYFEGDQHSNYRMIRAIKNRFGAANELGVFAMTENGLKGVS
                     NPSAIFLASYRDDTPGSCVLVTQEGSRPLLVEIQALVDDAHGFTPKRLTVGLEQNRLA
                     MLLAVLNRHGGIACFDQDVFLNAVGGVKIGEPAADLAVILAMLSSFRNRPLPEKMVAF
                     GEIGLSGEVRPVARGQERLKEAEKLGFKRAIVPKANMPRNAKEFPNLKIYGVSSLQEA
                     IDICREDRD"
     gene            complement(35678..36742)
                     /locus_tag="WIX18_000131"
     CDS             complement(35678..36742)
                     /locus_tag="WIX18_000131"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HEZ5237304.1"
                     /translation="MTLLKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAG
                     SFLDLCKNTELATEVTIQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRA
                     LQHEDDIAKLHVPDMEKLQYVFDAVSSIRKALDGRVPLIGFSGSPFTLACYMVEGGSS
                     KEFRTIKTMMYSRPDLLHKILDTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDEAF
                     KEFSLKYIRQIVAGLKRESEGRRVPVIVFAKGGGLWLESMAEIGADALGLDWTCNIGE
                     ARRRVGKQVALQGNFDPFALFGTPESIRTEVARILADYGQGSGHVFNLGHGINQHADP
                     EHAKILVDTVHELSRQYHGG"
     gene            complement(36817..38034)
                     /locus_tag="WIX18_000132"
     CDS             complement(36817..38034)
                     /locus_tag="WIX18_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis protein HemY"
                     /protein_id="HEZ5237305.1"
                     /translation="MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAF
                     VLGSLIAVVVWYFLFKFIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEK
                     AELEASRVLVNKEAGDNRTLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYL
                     LLAESALNRRDYEAAEANLHAAAKMNANLTRLVRLQLRYAFDRGDALQVLAKTEKLSK
                     AGALGKSEMERYQNWAYRRQLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLG
                     LYADAVKWVKQHYPHNRRPELLEAFVESVRFLGERDQQKAIDFADAWLKEQPDNALLL
                     MYLGRLAYGRKLWGKAKGYLEASIALKPSISARLVLAKVFDETGEPQKAEAQRNLVLA
                     SVAEENRPSAETC"
     gene            complement(38031..39365)
                     /locus_tag="WIX18_000133"
     CDS             complement(38031..39365)
                     /locus_tag="WIX18_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HEZ5237306.1"
                     /translation="MGEPENKSSEPVREIQASKEMPSETSSPRKENETEVHIPAAPFI
                     VKQSGSNALAVCALVLAALGLGTSGFLFVQGQNVLKNQELAFNQKIDKAALGESENAA
                     LLKDNLNRQAAIQSELDRLDGNVKANGEQILEMQKSYRELTKGRADWLVDETETILNL
                     AAQQLVLTGNIQTAVGVLEHIDSRLSRFNQAELLPIKQAVSSDLAELKNRPYVDISGT
                     ALRLDRLEIAVSGLPLILDGVLKPSVQARNEAVSASWWQNVWEKSLGTLKGLVEIRRL
                     ENNDAMLISPEQAYFVRENLRLRLLDARTALMQRNSEVYQGDLNNAETAVRQYFDAKS
                     PATQSWLKELAELKALDVRMTADDGLKNSLNAVRAYRDGTRMTTAENQEAEQATSEPA
                     NENTASEPAAASDVKTIEAPSLPSERKPEQPAKKQPVPEKAGRSPSAKGERA"
     gene            complement(39380..40141)
                     /locus_tag="WIX18_000134"
     CDS             complement(39380..40141)
                     /locus_tag="WIX18_000134"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEZ5237307.1"
                     /translation="METAKPIMLIVRPSGRAKDDVETCRRAGWQAEVLSPIEIEADAA
                     GLELLSEQYARADAVFWVSPTAVETAVPYLNLSDGIKIHIAVGQGSRRALERYLGRTV
                     IAPHDGNDSEAVLRLPVWNSLPEGARVLFVRGHGGRDFLMNALQEKGFRTEMAEVYFR
                     RHKPLNFQNFQTENIAAAYITSTELVRLLFGQLPPQFSRFFKSLLYFTHHPRIAEALK
                     REGVCSVETVPTLEAALSHSSISVSDGMVFPGTSN"
     gene            complement(40159..40581)
                     /locus_tag="WIX18_000135"
     CDS             complement(40159..40581)
                     /locus_tag="WIX18_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237308.1"
                     /translation="MKKMFLSAVLLLSAAAQTVWADTVFSCKTDNNKYIEVQKINRNL
                     YEYSFGSAAKKEIAIRNSKADLSGRSDRWQGMGSGRWATMKFQNGEFMYTIWTGFDSV
                     THTESSGVVVERRGKEVARVGCTPQTAQANFNDADFSR"
     gene            complement(40832..41152)
                     /locus_tag="WIX18_000136"
     CDS             complement(40832..41152)
                     /locus_tag="WIX18_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2322 family protein"
                     /protein_id="HEZ5237309.1"
                     /translation="MNFQDYLATFPSIDHLGGLDVQDADGKTVHHIPAVQGKLGSLKL
                     YNALAERFDGKLDKEAAEQGLIWFAEHVADARAHPGKHPNIDLLEKVVQSGETLLLKP
                     LAAQ"
     gene            complement(41175..41801)
                     /gene="upp"
                     /locus_tag="WIX18_000137"
     CDS             complement(41175..41801)
                     /gene="upp"
                     /locus_tag="WIX18_000137"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HEZ5237310.1"
                     /translation="MNVNVINHPLVRHKLTLMREADCSTYKFRTLTTELARLMAYEAS
                     RDFEIEKYLIDGWCGQIEGDRIKGKTLTVVPILRAGLGMLDGVLDLIPTAKISVVGLQ
                     RDEETLKPVSYFEKFVDSMDERPALIIDPMLATGGSMVATIDLLKAKGCKNIKALVLV
                     AAPEGVKAVNDAHPDVTIYTAALDSHLNENGYIIPGLGDAGDKIFGTR"
     gene            complement(41907..42218)
                     /gene="grxD"
                     /locus_tag="WIX18_000138"
     CDS             complement(41907..42218)
                     /gene="grxD"
                     /locus_tag="WIX18_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HEZ5237311.1"
                     /translation="MASIHDQIKEVVTTHRVVLFMKGTKQFPQCGFSSRAVQILNAAG
                     CTDYVTVNVLENPEVRQGIKEYSDWPTIPQLYVNGEFVGGSDILMEMYEAGELQELLK
                     A"
     gene            complement(42319..42534)
                     /locus_tag="WIX18_000139"
     CDS             complement(42319..42534)
                     /locus_tag="WIX18_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
                     /protein_id="HEZ5237312.1"
                     /translation="MKAIHPYACPRCCRLPANTFRTGMANSASKFCIAKGGRREVKKD
                     ESGGGYALCHLPDSRIVEEWEYFRSQH"
     gene            complement(42560..43339)
                     /locus_tag="WIX18_000140"
     CDS             complement(42560..43339)
                     /locus_tag="WIX18_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEZ5237313.1"
                     /translation="MHIIDSHCHLNFEGLKERLPEVLSNMEANGVGQVLAISVSRESF
                     SEVFAIAEAHEHIYCTIGVHPDSKEAEEFSIAEMVAAAAHPKVVGIGETGLDYYWCKG
                     DLSWQHKRFADHIEAANQTGLPVIVHTRDAAADTLSILKECRVNSGVIHCFSEDTAFA
                     RAAMDLGLYISFSGIVTFKNAPLVQEAAKYVPDDRILVETDAPFLAPVPKRGRQNEPA
                     FVRYTAEHIAKLRNQTLEQVAAYTTENFYRLFKKVPDMRVV"
     gene            complement(43344..43694)
                     /locus_tag="WIX18_000141"
     CDS             complement(43344..43694)
                     /locus_tag="WIX18_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilZ"
                     /protein_id="HEZ5237314.1"
                     /translation="MSDGQNIPAKMMSLQLKDMNLLYSSYMPFLEHGGLFVQTNDVFS
                     IGDDILLAVEILNFPKLFLPTKVAWINPARTSSKPKGVGLAFTKHENCLKVKDQIEVE
                     LGNTIGGSRPTFTM"
     gene            complement(43698..44675)
                     /locus_tag="WIX18_000142"
     CDS             complement(43698..44675)
                     /locus_tag="WIX18_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HEZ5237315.1"
                     /translation="MIYPWHNEQWRQIAEHWERRPNAWLFAGKKDTGKTTFARFAAKA
                     LLCETPAPGCKPCGECMSCHLFGQGSHPDFYEITPLSDEPENGRKLLQIKIDAVREII
                     DNVYLTSVRGGLRVILIHPAESMNVQAANSLLKVLEEPPPQVVFLLVSHAADKVLPTI
                     KSRCRKMVLPAPSHGEALAYLRDRGVAEPEEFLAFHSGAPLFDEADGVRALRIKLLDI
                     LAEPRLLKILDYAALFDKEKLPLDVFVGWMQKWLVDLGLCLQHMKPVYYPAYEDRLLQ
                     TASGFRPRNVFAAEDMLKQLAPYGFHTLNVKMQIEHLLINYLELKKENG"
     gene            complement(44709..45821)
                     /locus_tag="WIX18_000143"
     CDS             complement(44709..45821)
                     /locus_tag="WIX18_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEZ5237316.1"
                     /translation="MTAKEELFAWLRHMNKNKGSDLFVTTHFPPAMKLDGKITRITDE
                     PLTAEKCMEIAFSIMSAKQAEEFSSTNECNFAISLPDTSRFRVNAMIQRGATALVFRA
                     ITSKIPKFESLNLPPVLKDVALKKRGLVIFVGGTGSGKSTSLASLIDYRNENSFGHII
                     TIEDPIEFVHEHKNCIITQREVGVDTENWMAALKNTLRQAPDVILIGEIRDRETMDYA
                     IAFAETGHLCMATLHANSTNQALDRIINFFPEERREQLLTDLSLNLQAFISQRLVPRD
                     GGKGRVAAVEVLLNSPLISELIHNGNIHEIKEVMKKSTTLGMQTFDQHLYQLYEKGDI
                     SLQEALKNADSAHDLRLAVQLRSRRAQSSSPDLELL"
     gene            46007..46708
                     /locus_tag="WIX18_000144"
     CDS             46007..46708
                     /locus_tag="WIX18_000144"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HEZ5237317.1"
                     /translation="MSLKTVAVIGAMEQEIELLREMMENVKAVSFGKFAAYEGELAGK
                     RMVLALSGIGKVNAAVATAWLIHQFAPDCVINTGSAGGLGKGLKVGDVVVGTEIAHHD
                     VDVTAFGYVWGQVPQLPAVFVSDGLLVGKAKQAAEVFEGAAVEQGLIVSGDRFVHSSE
                     GVAEIRKHFPKVKAVEMEAAAIAQTCHQLETPFVIIRAVSDSADEKADISFDEFLKTA
                     AASSAKMVAEIVKSL"
     gene            46851..48644
                     /gene="lepA"
                     /locus_tag="WIX18_000145"
     CDS             46851..48644
                     /gene="lepA"
                     /locus_tag="WIX18_000145"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HEZ5237318.1"
                     /translation="MKNIRNFSIIAHIDHGKSTLADRFIQYCGGLDLREMSTQVLDSM
                     DIEKERGITIKAQTAALNYKARDGQVYQLNLIDTPGHVDFSYEVSRSLSACEGALLVV
                     DASQGVEAQTVANCYTAIDLGVEVVPVLNKIDLPAADPERVEQEIEDIIGIDAVGAVQ
                     CSAKSGIGVEDVLEEIVAKIPAPTGDENAPLQAVIVDSWFDNYVGVVMLIRVKNGTIK
                     LKDKVRFMSTKAETQVEQLGVFTPKSVQKQELKAGEVGFLITGVKELGQAKVGDTVTL
                     VANPATEPLPGFQEVQSQVFAGLYPVESHDYEALRDALEKLQLNDASLKFEPEVSQAL
                     GFGFRCGFLGLLHLEIVQERLEREFDMDLITTAPTVVYEVVLKSGEKIEVENPSKLPD
                     IGSIETILEPIITATILVPQEYVGNVMTLCNQKRGVQVNMQYMGRQVMLTYDLPMNEV
                     VMDFFDKLKSTSRGYASLDYHFKEFQPSDLIKLDIMVNGEKVDALSLIVHRQSAVHRG
                     RELASKMRELIPRQMFDIAVQAAIGSQIIARENVKALRKNVLAKCYGGDITRKKKLLE
                     KQKAGKRRMKQVGNVEIPQSAFLAILQVSDK"
     gene            48787..49806
                     /gene="lepB"
                     /locus_tag="WIX18_000146"
     CDS             48787..49806
                     /gene="lepB"
                     /locus_tag="WIX18_000146"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEZ5237319.1"
                     /translation="MNTMLMSGAAAALLAGIILYFKSDKKRQENGEWSSGLEYAYILT
                     AVGVFAALSLFMSFTAVFLIFVVLCGTAWGVYKYRLKTHPEISESSHFGDYFGSFFPT
                     VLVLFLIRSFIAEPFQIPSSSMRPGLIKGDFILVGKFSYGLRVPVLNNIFIPTGKIER
                     GDVVVFNYPLQPEMTYIKRIVGIPGDVVEYRNKVLTVNGKPASDIPDGTYRYPDDTDP
                     SEIHNTDMFHSGLDGKSFNILKKEGQPAVSLPVLGKYTSDIMSENGYSIEQSGLEHCQ
                     YADDGSGFVCKVPEGRYFAMGDNRDNSADSRYWGFVDDKLVVGKAMFILMNFGDFGRA
                     GTAIR"
     gene            complement(50025..50174)
                     /locus_tag="WIX18_000147"
     CDS             complement(50025..50174)
                     /locus_tag="WIX18_000147"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237320.1"
                     /translation="MNWQAVKTGKTKHASNGAERKMPSEALSDGIGAGRIKKAASAGM
                     AMQLK"
     gene            complement(50220..51125)
                     /locus_tag="WIX18_000148"
     CDS             complement(50220..51125)
                     /locus_tag="WIX18_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ5237321.1"
                     /translation="MGKGGDIVVGNGKKYAAPLLVLGCVVFGLGSLIVRSVPVGSYAI
                     AFWRLLISVFVFWFLARFFGQKFPKNRKTVRYALTAGVFLAFDLALWHESIHAVGPGI
                     STLLNSLQIFFLSAIGVFFFGERLSGLKKAGLISAVAGVAMIAGAEFGYNGNAVWGFV
                     SGLVSGLMLALSMVFVRKTHEIETVALFPSMMILSLGGAVSLVVPALLMDGGALYPTT
                     WKDAGLVLVYGVVMQCFAWAMVAYAIPLLSLSLTGLLLLSEPVAALFIDYFGLGKPIE
                     GVQWAGVALTLSAIYLGSLKQQSEP"
BASE COUNT        12180 a        14608 c        12949 g        11540 t
ORIGIN      
        1 tactgtctgc ggcttcgtcg ccttgtcctg atttttgtta atcccctata tcagataaaa
       61 cagcggtaaa attgccgtct gaaaccaact ctgcgccata cgggacacgc tctgcacgtc
      121 tatttgcctc cgatatatcc tccctactgt aggaacgtct gccgatttgc acgaaatcgg
      181 cacctctagc acccttcagg atggcggacg ttatccgttc ttgggattct gcaagacggt
      241 cgacggcatt atacagacgc tcggtctgat acccttccga agcaacctgc ttcaggtatt
      301 ccaaataacc gtaacccaac gcccctccga caagcagggt cgtcaacgct accagcgttg
      361 ccgaacggat tttagggggc atatcttgaa gcatatctct accgaaccga accaaagtct
      421 ctttaaagtc ggactctaca cgcgtagaac cctcggaaat cttgaagttc aactcatact
      481 gcttccgttt gtccgctgtc aaccgcttga ggttgtcatc cccgtattgg acggttgaca
      541 caaccctgta cagactgtcc tgtatttcga ccagcgtctg tgcaaagttg gcggtcatac
      601 tggattccca acccttgccg ccgattctga tactcaaaac ggtatccagg cgttccagca
      661 gggcttcggg agacagcagt gcgtattctt caatattttc cataggttga ttatagcaga
      721 accttatacc tgttacagac aaggttgtcg ggatttgaac gtccgtcgag cttggttcgt
      781 atagagccgt agggggtgtt tagggctttg gcggcagctt gtacgctggg gaacgtgagt
      841 gtttcgcctg tggcggtgtc gaggatggag acaggttttt ggttttgggg aggcgtattt
      901 tccttcattt taagtttccc gcactccgga cacccatact ttgactttat agctgtgtcg
      961 taatacaaaa gttggacaac cccgtgcgta ggacatctaa cactggaagg tttataaatg
     1021 ccactgaact ccaacaattc taaatgtgga aatttctctt gaaagcgtga tttggcggta
     1081 tcgaaagtca ttcgcttacc cataatttgt ctccataggt tatgtgcaaa tggattacac
     1141 aaccaaaata tagaaatttt caaatttttt gagacctacc tggaatcctg cgcaagcaca
     1201 atgtaaagaa aaatggtata cgtctttact aaatctttac ataaattaac tctaatcggg
     1261 atttgaacgt ccgtcgagct tggttcgtag gatttagggt gttgtgaacc ttacctatcg
     1321 tacccaagca ctttgtacct gtttgaaata aggttgtcgg gcgacgttcg acccttgagc
     1381 ctgtgattga tttgttggaa atgtacacct aaagcagcac ctgcggcagt aacgcttggg
     1441 aacgtgagtg tttcgttggt cgttgtgtcg aggatgagga ggggcttccc tacatttgga
     1501 ggtgtttggg tttttgacat cttagcacac tcaggacacc cgtactttga ctttataagg
     1561 gcattaaatg tcgaataacg aacgttcccg tgcataggac aattaacggt tactgggtaa
     1621 ttcacaccgt caaagccggt tagagagata ttagggaata tatcagtaag ttcagaagct
     1681 gcttggttga aagatttggc catttgagac tccaaaattg attgtcaaat ggatttaata
     1741 gcaaatttat aaaaatgtca aatttttcga gaagcacctg atagtggcga ggggtataca
     1801 ctgttaaaaa gtgtatacgt catttagtgc agatgtgaac cttatacctc cctgcaagta
     1861 aagtctctgt gtgaacccga ccttttatac ggtcagtgat agctgctggg tttataccca
     1921 atgaccttgc agcagatgct cttgagggga atgtaagtgt ttcgccagtt acagtatcct
     1981 ccaatactgt atttttagat aatttatcta ttgtatcttc tggaattttg tgggaattga
     2041 caccataaga tgcacatttt ggacacccac ttttagagtc caacatactt ttgaatgtag
     2101 agcaagtaac cctcccgtgt ataggacaga cgattaccgt cgggtaacga acgccattga
     2161 actccacaag attcaaatgt ggaaatttag aggttagctt agaaactgct tgagtaaatg
     2221 taagtgccat agtggttgtg aacttacttt accaacctat aacgatacct aatcaatcgg
     2281 tcaaacggag tgcgtccgct taaacgtaca gctaaagtgc tgttggagca accgataaat
     2341 ttactggcag ccagtgtact tgcaaactcg tagatttccc ctgtctctgt gtcctccaac
     2401 ctaatggcaa cggcgtttgg agagggcttt tcgggatttc gagtacattc aggacatcct
     2461 gttgaggatt tcatggcagc ttgtagattc ccgtaaacaa ccgacccatg caaagggcat
     2521 tggattgtta ccggttcgta gtttttagtg aacttcaaaa ccgtcttatc aggaaattta
     2581 ctggaaaacc ttaactgaac atcttgtagc gagagtgatt ttggcattat agacctttct
     2641 aaaatgaaag cattatacaa ccaaaatata gaaattttca aattttctct gaacgcactg
     2701 gtatccgatg gagctaaatg taaagaaaag ggtatatgtc cttactaaat ctttacacat
     2761 tttaactgta tagtgtttga caagcaacag gcataggcgc ataatgcacc cgtagttaga
     2821 tagatagtaa ggagataacc aatgacttag cacctgcccc cctctctctc gcgcaccccg
     2881 cccctcgctt gcggctaatg ggctttgcgc gaaatataca ctttcatctc ctgcatggct
     2941 taaccgccta tgcaatagta cacacatcaa caaatcaggc tggcacgtct tggcattggc
     3001 tgacgtacca ttgtagcccg aaatgttgat accctactat ttatgaccaa cggcggatta
     3061 gggcttcaga cggcaatttt actgcaaaac cttatgcgaa cggatgatgc agcacaatcg
     3121 tttcttctcg gtcggggccg gtggagacga tggcgaccgg cgcgccgcag acttcttcaa
     3181 tccgtttcaa atatgctttg gcattatcgg gcagttcctc ataatttttg atgccgaaag
     3241 tcgattcttt ccaaccctcc attgtttcgt aaatcggttt gcaggtttcc accgcatccg
     3301 aaccgcaagg caggatatcg gttttgccgc cgtcgggcaa ttcgtagccg acgcagatat
     3361 tgatggtttc aacgccgtcc attacatcga gtttggtaat gcacataccg gaaatgccgt
     3421 tgatttggat ggagcgtttc agggcggcgg catcaaacca gccgcagcgg cgtgcgcggc
     3481 cggttaccga gccgaattcg tgtccgcgtt ccgccaaacc tgcgcctact tcgtcgaaca
     3541 attcggtcgg gaacgggcct gaaccgacgc gcgtggtata ggctttgacg atgcccaaaa
     3601 cataatccag catttgaggg cctacgcccg cgcctgcgga agcggctccc gccagacagt
     3661 tggacgaggt aacgaaggga taagtgccgt agtcgatgtc caacaacgca ccttgcgcgc
     3721 cttcaaacag cagtttttcg ccgtttttgt ttttctcgtt caacacgcgg gacacgtcgg
     3781 taatcatcgg cgcaatgcgc agcgcgactt tttcgataac cgccatcacg tcttccgctt
     3841 taaccggctc ggcattgtgc agatgttgca gttggacatt gtaataggca aggatggcat
     3901 ccagtttttc acgcagtttt tcaggatgca gcaaatcggc ggcgcgaatg gcgcggcgtg
     3961 ccactttgtc ttcgtaggca gggccgatgc cgcggccggt cgtgccgatt ttgcctttgc
     4021 cgcgcgatgc ttcgcgggct tggtcgagcg cgatgtggta aggcaggatc agcgggcagg
     4081 tcggcgcgat tttcagacgg ccttcgacgt ttttcacgcc tgcagcgttt aactcgtcga
     4141 tttcgcccaa cagggcttcg ggggagacga caacgcccga accgatgaag cagtccagac
     4201 tttcatgcag gatgccgctc ggaatcaggc gcaaaatggt ttttttgccg ccgacgacca
     4261 aagtatgacc cgcattgtgg ccgccttgga agcgcaccac gccgccggct tcttccgcca
     4321 gccagtcaac gattttacct ttaccctcgt cgccccactg tgcgccgatt actacaacat
     4381 ttttagccat agccatataa cctatcgata ttaaaaatta ttgcggaaat ccccaaaccg
     4441 gtgcggcttt gcgccccacc acgatttgcc tttcatccgc catgaacggg tatttagcgt
     4501 ttcacgacct gccaaacgcc gtccgtcttt ttcagacggc ctgcaagctc ttccgaaaca
     4561 ttgtgtccga taccgtagtc aatcacgaca cactgccctt gttcacgcaa ggcttcgact
     4621 gcttcgcgcg ccgcttcggc atcttccgca tcgaccaaca cggcgggctg ccgttcgctg
     4681 gtgggcaaac gcccgataaa gctgcgcaag tcgaaactga atcccgttgc cgggcgcgcc
     4741 ctgccgaaat atccgcccaa tccgtcataa cgcccgccgc gcgcgaccgc gtcgtggaaa
     4801 tcggcggcat aggcggcata cagcaagccc gtgtggtaat tgtcgacgcg cagctcggac
     4861 aagtcgatat ggatttcaca atcggggaat gcgtcgcaca ccgcctgcaa ttcgcccaac
     4921 gcgccgccga ccgccgacaa atccggcaac cgtccgcgcg cgtcggacaa cacttcacgc
     4981 ccgccgtaca ggcgcggcag cagcgagaat gcttttgccc acataccgtc cagcttccaa
     5041 gccttgacct gcgcttcgac cgtctcggta tctttatcct gcatcaaggc aagcagcgtt
     5101 gcagactgcc ccgcatccaa atgcgccgca tcggacaagg cgcgaaatat gccgatatgc
     5161 cccagcgaaa gcagcacttt gcccatatcg gcaattttca tgcttttcag catcaggtct
     5221 atcagctcga tgtcgccacg gatgtcggca aaaccgtaca tttccgcccc tgcctgcaag
     5281 ggttcgcgca tattcagcag accgtcggac tgcgcgtgca acaccggacc ggcataacac
     5341 aaccggttaa tcccttggtt ggcggataaa agatgggcat cgatacgcgc cacctgcggc
     5401 gtgatgtcgg cgcgtatgcc caactgcctg ccgctgagcc tgtccgttac caaaatggtt
     5461 ttcagggaaa gccccgcatc gatatgcgtc agcagggaat gtgcgtactc catcagcgga
     5521 ggctgtacca gttcataacc gtgtacgcgg aacagtgcca acaactgctc cctcgcgctt
     5581 tcaagctgcc gcgcgttcgt gggcagtacg tcggcgatat gttccggaag ctgccatgtc
     5641 tgcatgagaa tctgccttct attttatcat gtcaatacaa aaggctgccc gatccgcaat
     5701 cagacggcat ctttgccgca acgcatcacg ccgctgtcaa aacggcgatg cttccttccg
     5761 attcagaatc cgaacagccc ctgtccgacg gctcaatgcc gtcaagtcgt taaaaccaaa
     5821 ctttaccata aaatacacac aatctgaata tacttttata ccctgtatcc gccgtctgac
     5881 ggcacggcat ttttttacga tataatgtgc gccattattt ctcatcactt cctgctgccg
     5941 ttttctgctt cagacggcat ttttgttgat tgaacactta tgctgctcga cctcaaccgc
     6001 ttttcctttt ccgtcttcct gaaagaagtc cgcctgctga ccgctcttgc cctgcccatg
     6061 ctgttggcgc aggtcgcgca ggtgggcatc ggttttgtcg ataccgtgat ggcgggcggt
     6121 gcgggcaagg aagacttggc ggcggtggct ttgggcagca gcgcgtttgc cacggtttat
     6181 attaccttta tgggcattat ggcggcgctg aacccgatga ttgcccagct ttacggcgcg
     6241 ggtaaaaccg acgaagtggg cgaaacggga cggcagggga tttggttcgg gctgtttttg
     6301 ggcgtgttcg gcatggtctt gatgtgggcg gcgattacgc cgttccgcaa ctggctgacc
     6361 ttgagcgatt atgtggaagg cacaatggcg cagtatatgc tgttcaccag cttggcgatg
     6421 ccggcggcaa tggtacaccg cgcactgcac gcctacgcct ccagcctgaa ccgcccgcgc
     6481 ctgattatgt tggtcagctt tgcggcgttt gtgttgaacg tgccgctgaa ctatattttc
     6541 gtttacggca aattcggtat gcccgctttg ggcggcgcag gctgcggact ggcgacgatg
     6601 gcggtgtttt ggttcagcgc gctggcattg tggatttata tcgccaagga aaatttcttc
     6661 cgcccattcg gactgacggc gaaattcggc aaaccggatt gggcggtgtt caaacagatt
     6721 tggaaaatcg gcgcacccat cgggctgtct tattttttgg aagccagcgc gttttcgttt
     6781 atcgtgtttt tgattgcgcc tttcggcgag gattatgtgg cggcgcagca ggtcggcatc
     6841 agtttgtcgg ggattctcta tatgattccg caaagcgtcg gctcggcggg gacggtgcgc
     6901 atcggctttt cgcttgggcg gcgcgaattt tcgcgggcgc gttatatttc gggcgtgtca
     6961 ctggtgtcag gatggatgct cgccgtgatt accgtgcttt ccttggtatt attccgttcg
     7021 ccgctggtaa gtatgtacaa caatgatccg gcggttttaa gcatcgccgc caccgtctta
     7081 ctgttcgccg gcttgttcca accggcagac ttcacccaat gtatcgcctc ctacgccttg
     7141 cgcggctaca aagttacaaa ggtgccgatg ttcatccacg ccgccgcctt ttggggctgc
     7201 ggtctgctgc cgggctacct gctcgcctac cgtttcgata tgggcattta cggcttctgg
     7261 acggcattga ttgcctcgct caccatcgcc gccatcgcct tggtgtggtg cttggaattg
     7321 tgcagtaggg agatggtcag atcgcataag gctgtctgaa aactccgccg attaaaaata
     7381 tagtggatta acaaaaacca gtacggcgtt acctcgcctt gccgtactat ttgtactgtc
     7441 tgcggcttcg ttgccttgtc ctgatttttg ttaatccact atagaaacga tgggctgaag
     7501 cccgccactg gcaatactca ttttaaagtt caaaccatgc aacccatccg ataccgaacc
     7561 gaccttaccc cctacaacac tttcggcctg cgcgcccaag cccgagcctt tattgcgctt
     7621 gaacacgccg acgggttgcg cgacatcgtc cggctacccg agttcaaccg agatactgtt
     7681 ttatggctgg gcggcggcag caatatcctt ttgatggagg actacgccgg tctggtcgta
     7741 catatggaaa acaaaggcat acgcgaaatt gctcgttcag acggcatggt tctgattgaa
     7801 gcgcaggcgg gcgaaatctg gcacgatttt gtcctgcacg ccgtcgcgct gggtttgaac
     7861 ggtttggaaa acctgagcct gattccgggt acggtcggcg cgtcgcccgt gcagaacatc
     7921 ggcgcatacg gcgtagaggc gaaagatgtg attcacagcg tgcgctgctt cgatttggat
     7981 acggaaacct ttgtaaccct ttccaatgcc gactgccgct tcgcctaccg cgaaagcctg
     8041 ttcaagcagg aaggtaaagg gcgttatgtg attgtttcgg tcgtatttgc attaaaaacg
     8101 cattttgtgc cgaacttggg ttacggcgat ttggcggccg ccgttgccga actgagcgcg
     8161 ggcagggtgc cgacggcgaa agatgtttcc gatgcagtgt gtgcaatccg caacagtaaa
     8221 cttcctaatc ctaacgtgct tggcaatgtc ggcagtttct ttaaaaaccc cgtcgtcagc
     8281 gcagaaaaag ccgccacctt gttgcagcgg catcctgata tgccgcgcta tccgcagccc
     8341 gacggttcgg tcaaactcgc cgccggctgg ctgatcgacc aatgtcgtct gaaaggcttt
     8401 caaatcggcg gcgcggcggt acatgacagg caggctttgg tcttagtgaa caaaaacaat
     8461 gcctcggcaa acgatgtccg gcagttggcg caacacatca aatttacagt atttgctcgg
     8521 tttcaggtag aattgcacgc cgaacccaat tggctgcctg cttcgttcag cctgtaaatc
     8581 caaggagtat gcccgtgacc cgccccgcca aaatcaatac ttacacacgc atcatcgacg
     8641 ccagccttgc gcttttcaac gaggaaggcg agcgcaacat cagcaccaac catattgccg
     8701 cccacttggg catcagtccg ggcaacctct attaccactt ccgcaacaaa gacgaaatca
     8761 tcgtccaact gttcaaacgt tacagcgaag ccctgctgga atacctcaac gaagccgtgt
     8821 tgccgtctga tgtggaagac tccatcaatt atatggcggg catttacgac gtgatgtggg
     8881 aataccgctt cctattcagc gacgtgaaca ccctgcttgc acgcagtgcc gaactattgg
     8941 gcgaacacaa taccttcacc caagccaaag tctccccgct cttggtcaac ctgctgaccc
     9001 agctcaacgg tctgaacatc atccaagccg accaaaccgc catgaacgac ctcgccgtca
     9061 atatgtggat gatcacgaaa tactggttcg acttcgacag ctccctgcgc ggccgcacca
     9121 agctgaccga agactccaaa gcacgcggcg tccgtcgtac cttaagcctc cttcgtcctt
     9181 atcttttgcc cgaacaccgc gagaaatacg accggaaaat cggcaacggc aacccgtaaa
     9241 cccacagcgt ccgaatcagc cttcagacgg cacttacccg acggtatcag cgaatgcgcg
     9301 cagtcccccc gccccatatc tccatcacag gcctaggtta cctcggcctg ccgctggcac
     9361 aaaagtttta ccaacacggc agccgcgtcg ccgccataaa acgcagcctg acttcggacg
     9421 acatcaacct gcccatacat ctcgacacct tcgacctcgg cagcaccgat gcctttcaga
     9481 cggcattgtg gcggcaccac gccgacaaac ccgtctggtt cttcctgcta ccgccctcct
     9541 cgctgacgca ttacgccgac accgtcaaac aatgggcaga acttgcccgg gcgtgcaacg
     9601 tgcaacacct gattttcaca agcagcacca gcgtttacgg cgatacagcg cgcgaatgcg
     9661 acgaaaccgc cacacccgat ccgcaaaccg agtccgcccg ccaaatcctc gccgccgaac
     9721 aacacctgct cgacagcggc atctccaaca tcgacatcct gcggctgggc gggctttatt
     9781 gcgccgaacg ccatcccgtc agccgccttg ttcaaaagca aaacatcccg ggcggcaacc
     9841 gccccatcaa catcgtccac cgtaatatcg ccgtcgaaag cctgtttcag acggcattta
     9901 accccggcgg caggcggctg aaaaacatta tcgaaccgcg ccacccgaca cgacgcgaat
     9961 tctacacgga agaagccgcc aaactcggcc tgcccgcgct ggatttcgca cccgacgaca
    10021 gcgtgggcaa aatcatccgt accgtttgcg ataacggctt aagcctgtaa aataagcggc
    10081 aacagcaaca aacaggcatt ctccgcccca atcagaaaat atgtccgcct tactccccat
    10141 catcaaccgc ctgattctgc aaagcccgga cagccgctcg gaacttgccg cctttgcagg
    10201 caaaacactg accctgaaca ttgccgggct gaaactggcg ggacgcatca cggaagacgg
    10261 tttgctctcg gcgggaaacg gctttgcaga caccgaaatt accttccgca acagcgcggt
    10321 acagaaaatc ctccaaggcg gcgaacccgg ggcgggcgac atcgggctcg aaggcgacct
    10381 catcctcggc atcgcggtac tgtccctgct cggcagcctg cgttcccgcg catcggacga
    10441 attggcacgg attttcggca cgcaggcaga catcggcagc cgtgccgccg acatcggaca
    10501 cggcatcaaa caaatcggca ggaacatcgc cgaacaaatc ggcggatttt cccgcgaatc
    10561 cgagtccgca aacatcggca acgaagccct tgccgactgc ctcgacgaaa taagcagact
    10621 gcgcgacggc gtggaacgcc tcaacgaacg cctcgaccgg ctcgaacgcg acatttggat
    10681 agactaacct tcagacggca tccgacatga acagcccttt tcacaacatc ggcatcgtaa
    10741 cccgccccaa cacgcccgac atccaagaca ccgcacacac gctgattacc tttttgaagc
    10801 agcacggctt taccgtctat ctcgacgaag tcggcataaa ggaaggctgc atctataccc
    10861 aagacaccgt cggctgccat atcgtcaaca agaccgaact ggggcaatac tgcgacctgg
    10921 tcgccgtttt aggcggagac ggcacctttc tctccgtcgc ccgcgaaatc gccctgcgcg
    10981 ccgttccgat tatcggcatc aaccaagggc atttgggctt cctgacccaa attccccgcg
    11041 aatatatgac ggacaagcta ttgcccgttt tagaagggaa ataccttgcc gaagagcgca
    11101 tcctgattga ggccgcactc atccgcgaaa gcaaaaccgc cgaacgcgcc atcgccctca
    11161 acgatgccgt cctctcccgt ggcggtgccg gacagatgat tgagtttgaa gtcttcgtca
    11221 atcgggaatt cgtctatacc cagcgttcgg acgggctgat tgtctccacc cccaccggat
    11281 cgaccgccta ttcgcttgcc gccggcggcc ccatcatgca ggcaggatta cacgccttca
    11341 cgctcgtccc catctgcccg caatccatga ccaaccgccc catcgccatt ccagacacgt
    11401 ccgaaatcga aatcctcgtt acccaaggcg gcgacgcgcg cgtccatttc gacggtcaaa
    11461 cccatatcga cgtgcaaaac ctcgaccgca tcaccatccg ccgctaccga aaccccttac
    11521 gcatcctaca tccgaccgac taccaatatt tcaaaaccct gcgccaaaaa ctgcactggg
    11581 gcgaacaatt ggtctgaacc gacccttacc ggaaaacacc tatgaatcca aaaactcccc
    11641 ccgaccatac agaagatgcc gtgcgcctct ccaaacgcat ggcgcaactg gggctttgtt
    11701 cgcgccgcga agccgacggc tacatcgaac agggctgggt aacggtcaac ggcaaaaccg
    11761 ccgtacttgg tcagaaagtt tcaccagcag accgtatcga actgaacaag aaagcccacg
    11821 aacagcaggc ggcacgcatt accatcctgt tgaacaaacc cgtcggctat gtcagcgcac
    11881 aagcggaaaa aggctataaa tccgccgccg aactgattac ccctgaaaat cactgggaag
    11941 gcgataccag ccgcatccgt ttcgatccga aacacaaaat cggtcttgcc cccgccggca
    12001 gactcgatat cgattcagtc ggattgctgg tgttgacgca ggacggccgt atcgccaagc
    12061 agcttatcgg cgaaaacagc ggcagtgaaa aagaatattt ggtgcgcgtg cgcggaaaat
    12121 tggacgaaaa aggacttgcc ttactgaatc acggattgag tttggacggc gagaaactgc
    12181 gtcccgccca agtagaatgg caaaacgaag accaactgcg cttcgtgttg aaacagggta
    12241 aaaagcggca aatccgccgt atgtgcgaac tggtcgggct gcgcgtcgtc gggctgaaac
    12301 gcatccgcat gggcaaggtc aaactcggca ggctgccgcc cggcaaatgg cgttatctcg
    12361 cccccggcga atcgttttaa ataagcatta aaaaatgccg tctgaaaatc cttgcgtttt
    12421 cagacggcat tgccttatgc ccaaataacg gtttcttcca agggcctgcg cgccttcgtg
    12481 gcgatttcct gaacgcggta gccgaatgtc gcggcgacgg acacgcccca ttctgccgca
    12541 tcgaacaaac cgaactgcct ggacaatacg cgttccatat cggcatagtt gaaaccttcc
    12601 accggacagg aatcgatacc tgccatcgcc gcacccgtca tcatgttgcc caacgcgata
    12661 taggtctggc ggcaacacca gtcaaacaag gcgcgcgaat cgtccaaaat cttgatgtcg
    12721 tcggcttgaa acgcccgata cctcgccaaa gattttgcca tggcatccgg ttcggtaacg
    12781 ccgcgccgtt tgaggctttc caacataaac gggctgtcga agcgggcatt tttctttgcc
    12841 aaaaacacca ccaaatgact ggcggtatcc aaagcatccg ccatacccca agaaaacggc
    12901 ttgattgcct gtcggatttc ggggttttga accacaacaa actgccaagg ctccgaaccg
    12961 accgaactgg gcgacaaacg cccgagttct aaaataaact gaaaatcctc ggcactgatt
    13021 ttacgtgccg catcgtaatg ccggcatgat ttgcggtttt taaatgcgga taggacctgc
    13081 tctttgctta atactgtcat cgtgcatcct tttattactt tgattgcaaa ttgatttcaa
    13141 accgatacgg ctctgccgca ccatacaatc cgtcctcgcc atcaagcttc atccggactt
    13201 tacccatctc tgctacggct gggaaaacaa agcggcggca gactcgggaa taacgcccca
    13261 atgcctttca gacggcattt gggcatcatt gcaaacgcgc ctacgggtag gcgatatagg
    13321 cataagccga atggttgtgg atagactcga aattctcgct ctcgacaacg aaactcttga
    13381 tgcgtttgtc ggcgatcagc gaagtagcga catcgcgcac catatcttcc acgaatttcg
    13441 ggttttcgta ggccttttcg gtaacgtatt tttcatcggg gcgtttgagc aggccgtaga
    13501 gttggcagct cgcctgcgcc tccacataat cgatgacttc ctcgataccg acttcggcat
    13561 cggcagtcag gctgacggta acgtgcgaac gctggttgtg cgcgccatat tgggaaattt
    13621 ctttggaaca cgggcaaagc gaggttacgg gaatcatgac cttcatactg tggccgtatg
    13681 ccccgtcttt gatttcgccc gtgaggctga catcataatc cagtaaggac cgaataccgg
    13741 aaaccggggc ggttttcttg cggaaaaatg ggaaagaaac gctgattttg ccggcgcggg
    13801 aatccaaaag cgcgaccatt tcagcagtca gcctgcgcaa ttgtgcaaaa tccaaggctt
    13861 cggtatgttg ctccatcaat gcgacaaagc gcgacatatg cgtacccttc tgctcggcag
    13921 gcaggtaaac cgtcatggtc agacgggcaa ctgtggactg gatgccttct gcagtttgca
    13981 gggtaatcgg aaagcgcagg tctttgatac cgacctgatt gatcggcaga ttgcgcaaat
    14041 ctcggctgga ttgcacgtct gcaatagtgt tcatgagttg tttttcctta atattcatgt
    14101 aattgttgag atgtgtgcat ggtatggcgt ttccaccggg gaatataccg tcaatctgca
    14161 aatgcgagat tatatcactc gcttttagca gctgcattga ttgtttctat ttttcagata
    14221 gtgataaaat cttcgattat tcacatctac ataggcagag accaaatgaa attcgccacg
    14281 aaagccattc attccagcta cgattgcgac gaacacaacc gcgcgctgat gccgccgatt
    14341 tatcaaaaca gtatgttcgc gttgcacgag attggcgaaa atgtgcctta ccgctactcg
    14401 cgcctgagca acccgacccg tcagatttta gaagacaccg ttgccgattt ggaacacggt
    14461 gcggcaggtt ttgcgttttc cagcggtatg gcggggattg atgccgtgtg gcgtaccttc
    14521 ctacaaccgg gcgataccat cgtcgcggtc gccgatattt acggcggcgc gtatgattta
    14581 ttggtcgatg tttatcaaaa atggggggtg aacgttgttt ttgccgattt gggcaatccg
    14641 gataatttgg acgaattgct caaagcgcac aaggtcaaac tggtttggct ggaaacgccg
    14701 tccaatccgc ttttgcgctt ggtagacatc aaagcgcttg ccgcgaaagc caaagcggcc
    14761 ggcgcactgg tcggtatcga caacaccttt gccacgccgt atctgcaaca gcccttggat
    14821 atgggttgcg attttgtgtt ccattccgct accaaatatt tgtgcggcca ttccgacgtg
    14881 ttgatgggca tcgtcgttgc caaaaccaaa gagctggcgc agcctttgca cgatatgatg
    14941 gtgcataccg gcgcggttgc cggcccgatg gactgctggc tggtgttgcg cggcatcaaa
    15001 acactggctc tgcgcatgaa cgcccattac caaaacgcac tcgaaatcgc gcgccgtttg
    15061 gaagcccatc ctgccattga aaaagtgttc catcccggcc tgccgtctca cgaacattac
    15121 gaactggcga aaacacaaat gcccaaaggc ataggcggcg tggttacggt ttatctcaaa
    15181 aacgacacgc gtgaagcggc aaacagcgtg attaaaaaca tgaaactggt caaaatggct
    15241 tccagcctcg gcggcgtgga aagtttggtc aaccattgct attcccagtc ccacagcggc
    15301 gtgccgcata atgtgaaaat ggaaatgggc atcagggtcg gcctgctgcg tttctctgtc
    15361 ggtatcgaag atgtagatga tatttggaat gatatttccg ccgcactgga tacgactttg
    15421 taaaccgtaa aaatgccgtc tgaaaccatg gtttcagacg gcatttcaat taacccggcc
    15481 gaaaatcaac gcttcagcat cttggccgcc tcaatggcat aataggtcaa aatcccatcc
    15541 gcgcccgcac gtttgaatgc cagcaggctt tccaaaacca ctttatcgcc atccagccat
    15601 ccgttggcaa ccgccgcctg tagcatcgca tattcgcccg aaacctgata ggcataagtc
    15661 ggcacaccga actcgtcctt cacgcggcgg acaacgtcca aatacggcaa accaggcttg
    15721 accattacca tatccgcacc ttcctgaatg tccaacgcca cttcgtgcaa cgcctcatcg
    15781 gtatttgccg gatccatctg gtaggttttc ttgtccgcct tgcccaaatt gcccgaactg
    15841 cccaccgcat cacggaaagg gccgtaaaat gcagaagcat atttggcgga atacgccata
    15901 atcagcgtat ggatatgccc ggcatcctcc aacgcctcgc gaatcgcacc gatacgcccg
    15961 tccatcatat cggaaggagc aaccacctgt gcgcccgctt cagcgtggca caaagcctgc
    16021 ttgaccaaaa cctctacggt ttcatcgttc atcacataac cgttttcgtc cgtcagcccg
    16081 tcctgaccgt gaaccgtata aggatcgagc gcgacatccg tcataatgcc cagttcagga
    16141 aacctctcgc gcaaggctcg gacagttgac ggcacgagtc cttcgggatt gtacgcctcc
    16201 tgcgcacgct cagttttgtt tgccgtaacc acgggaaaga gtgccaacat cggaataccg
    16261 agctttaccg cctcttccgc cgtaaacagc agcctgtcca aactctgacg cttcacgccc
    16321 tgcatagaag gcacatcctc ctcgcgcgcc gacccctcca atacgaacac cggataaatc
    16381 aaatcatcgg cggtcagcgt gtgttcgcgc atcaggcggc gtgaaaaatc gtccctgcgc
    16441 atacggcgca tacgcgaagc cggaacattg cggtaaggaa actgcataag ccctccaatc
    16501 atcctgtcaa caattcaaac catacggaag ccgccgcaac ttgcagacag catcgggcgg
    16561 caatcaaaat ccgttttcac cggaaagggt ttcggcccgc cgaaatgccg cgccgaagga
    16621 cggcgtcccg cccattaaag aacaatagca aaacaacagc ttcaggctgt cagccttcga
    16681 tattcttacg ccacaatacc aaaagtttcc cgatatgctg aacaggttgc gcgtcaaccg
    16741 cctcacataa ggcagtgcag atttcgatac gttcggcacg gtcgtcgccg aatacgcgca
    16801 ctttaatcag ctcatgcgcc gtcaatgccg catcggtttc cttgatgacc gcgtccgtca
    16861 gaccctgctg accgaccatc acaacaggat ggagatggtg cgcgcgcgct ttcagttcca
    16921 aaatttcttt ggtgttcaat ttggtatccg tcattttcct actgcttgaa taaaaagaat
    16981 aatgcggcat tgtacgcgat ttggcacgac atcggcaaaa ttaacgtaca atacgcggtt
    17041 tccattccga cccgcgaacc actatggctg tacgttccaa atcctcaaaa gcgtggctgc
    17101 acgaacacgt caacgaccac tacgtccata tggcgcaaaa agacggctac cgcgcccgtg
    17161 ccgcatacaa acttttggaa atcaacgaaa aagacaaatt aatcaaaccc ggcacggtac
    17221 ttgccgactt gggcagcgca ccgggaagct ggtcgcaggt tgccgccaag ctgacgggta
    17281 cttccggagc agttttcgcc ttggacatcc tgcctatgga agccataggg ggcgtctcct
    17341 tcattcaggg cgacttccgc gagaacgacg tactggcaca attcgaaacc ttgttggaca
    17401 accgcccgct cgaccttgta atttgcgata tggcgcccaa tatgtcggga aacgccgtaa
    17461 gcgatcaggc acgcagcttt tatctgtgcg aactggcttt agacttcgcc tcgcaacacc
    17521 tgaaaaccgg cggcagcttt ttggtcaaag tctttcaggg tgcaggctat caggaataca
    17581 tggcagccat gcgcgaaatt ttcggcacgg tgcagacgcg caaacccgaa gcctcgcgca
    17641 atcgctccag tgagatttat ttattgggca aaaataaacg ctgacaatac agacggcgtg
    17701 ctttacaatc atttccgttt tacacctcaa ttatggagcc ttgctaagtg gggaacacct
    17761 ttaaatcaat ccttgtctgg gtcgccttgg gtatcggcct gatggctgcg ttcaacgctt
    17821 tagacggtaa aaaagaagac aacgggcaaa tcgaatattc tcagttcatc caacaggtca
    17881 acaacggcga agtatccggc gtcaacatcg aaggatccgt cgtcagcggc tacctgatta
    17941 agggcgagcg caccgacaaa agcaccttct tcaccaacgc gcctttggac gacaacctga
    18001 ttaaaacact gctcgacaaa aacgtccgtg taaaagtaac gccggaagaa aaaccgagcg
    18061 cgctggctgc cctgttttac agcctgctgc ccgtcctgct gctgattggc gcgtggttct
    18121 actttatgcg tatgcagacg ggcggcggcg gaaaaggcgg cgcattctca ttcggcaaaa
    18181 gccgcgcacg cctgctggac aaagatgcca acaaagtgac ctttgccgat gtcgccggct
    18241 gcgacgaagc caaagaagaa gtgcaggaaa tcgtcgatta cctcaaagca ccgaaccgct
    18301 atcaaagctt gggcgggcgc gtgccgcgcg gcatcctgct ggcgggcagc ccgggtacgg
    18361 gtaagacgct tttggcaaaa gccattgcag gcgaagccgg cgtgccgttc ttcagcattt
    18421 caggttccga ctttgtcgaa atgttcgtcg gtgtcggtgc gagccgcgtc cgcgatatgt
    18481 tcgagcaggc gaagaaaaac gccccctgca tcatctttat cgacgagatt gacgcagtcg
    18541 gccgccaacg cggcgcaggt ttgggcggcg gcaatgatga gcgcgagcaa acattaaacc
    18601 aattgttggt tgaaatggac ggttttgaga gcaatcagac tgtaattgtg attgcggcaa
    18661 ccaaccgccc cgacgtactc gatcctgcgc tgcaacgccc cggccgtttc gaccgccaag
    18721 tcgtcgtccc cctgccggac atccgggggc gcgaacagat tttgaacgtc cattctaaaa
    18781 aagtgccttt ggacgaatct gtggatttat tgtccctcgc gcgcggcacg ccgggttttt
    18841 ccggtgcgga tttggcgaac ttggtcaacg aagccgccct gtttgccggc cgccgcaata
    18901 aagtcaaagt cgatcagagc gattttgaag acgccaaaga caaaatctat atgggtccgg
    18961 aacgccgcag tatggtgatg cacgaagacg aaaaacgtgc gacggcgtat cacgaatccg
    19021 gacacgcgat tgttgccgaa agcctgccct ttaccgaccc cgtccacaaa gtaaccatta
    19081 tgccgcgcgg acgtgcgctg ggtctgactt ggcagcttcc ggagcgcgac cgcatcagta
    19141 tgtataaaga tcagatgttg agccagctct ccatcctgtt cggcggacgg attgccgaag
    19201 acatcttcgt cggacgcatc tccaccggcg catcaaacga ctttgaacgc gcaacccaaa
    19261 tggcgcgcga gatggtaacg cgctacggca tgagcgacaa aatgggcgtg atggtttatg
    19321 cggaaaacga aggcgaagtc ttcttgggac gcagcgtaac ccgttcgcaa aacatttccg
    19381 agaaaaccca gcaggacatc gacgcggaaa tccgccggat tttggacgag cagtatcaga
    19441 ttgcctacaa aatcctcgat gaaaaccgcg acaagatgga aacgatgtgc aaagccctga
    19501 tggaatggga aaccatcgac cgcgatcagg tactggaaat catggcgggc aaacaaccca
    19561 gcccgcccaa agattacagc cacaacctgc gcgagaatgc ggacgcggcg gaagataacg
    19621 cgccgcacgc tccgactcgg gaagaaaccg aagcacctgc cccggcagac accgcttcga
    19681 cagagtccga gcagcagcct gaaaacaagg cttaacttcc cgaacaaacg gcagcccgca
    19741 agctgccgtt ttcccatccc gttttcagac ggcattttcc actcaatgcc gtctgaaacg
    19801 ccaaagccgt atcggttttt acgaatctgc gatatggcgg tttaaattga aatcagaacg
    19861 gggcaaggct gtaccggttt aaaattaaac cgctataata ccgcccttcg aatacacgcc
    19921 cgcattggtg atgcccgtga aaaaagttga aaaaaacatc ttggtgctgc acggcgcgga
    19981 caaaatgttc gagctggtcg acaaggttga ggattacccg cactttctgc cgtggtacag
    20041 caagaccgaa gtcatcgggc gtagcggcaa cgaactgaag gcgcggctgt ttatggatta
    20101 tatgcacgtt cgccaatcgt ttgccacgca caaccgcaac attccgggca gggaaatccg
    20161 tatggaactg ctcgaaggtc cgttcaaaac cttacgtgga acgtggaaat ttatcgattt
    20221 gggcgacgat atgtgcaaaa tcgaattcaa tttggaatac gatttttcca atgccgtttt
    20281 gtccgcctta atttcccccg tcttcaacca cctttccgcc acgctggtcg aagcgttcgt
    20341 caaagaggca gaccgccgtt atgcttgaaa ttgagattgt gtacgggctg cccgaccgac
    20401 aggttttgaa aaccatgcag cttgccgagg gaacaaccgt ccgcgccgcc gcactgcaaa
    20461 gcggtttgga cggcatattt gaagatttaa acctgcattc cgcgcctttg ggcattttcg
    20521 gcaaagccgt caaagacgac acgcccctgc gcgacggcga ccgcatcgaa gtgtaccgcc
    20581 cgctgttgat cgaccccaaa gaagcgcgcc gcaaacgcgt tcaaaatcaa gaagaataac
    20641 catgccgtct gaagccttca gacagcattc gacagaaaca cggaaaatat catgtcaaac
    20701 aaaatcaaaa tgcttgtcgg attgggcaac cccggcaaag aatacgaaca aacccgacac
    20761 aatgcgggtt tttggttcct cgacgaactg gcgtggaaat ggaaggcttc atttaaagaa
    20821 gaaaaaaaat tcttcggcga agtcgcccgt gccgccctgc ccgacggcga cgtttggctg
    20881 ctcaaacctg ccacgttcat gaaccgttcc ggacaggcag ttgccgcgct tgcacagttc
    20941 tacaaaatca aacccgaaga aatcctcgtc gtccacgacg aactcgacat tccctgcgga
    21001 cggattaaat tcaaactcgg cggcggcaac ggcggacaca acggcttgaa agacattcag
    21061 gcaaaactcg gcacggcaga ctattaccgc ctgcgcctcg gtatcgacca cccgggcgac
    21121 cgcaacctcg tcgtcggcta tgtcctgaac aaacccagta cggaacaccg ccgacagatt
    21181 gacgatgccg tcgccaaatc cctgcaagcc atacccgaca tccttgccgg caaatgggaa
    21241 gaagcaaccc gcttcctgca cagcaaatga cccgatgccg tctgaagccc tttcagacgg
    21301 catgttcccg atttccatat ccgaacagtc atgaccgaac tcaagcagct tatccaaacc
    21361 gaatccatcc ccgtcatcga agaaaccctc gatttcctgc tgtacgaatg cagcatcgac
    21421 gacgcaccat ccgccgaaga agtggcacaa tggcgcgaca tacttgccgc acgcggcggc
    21481 aaattcctgc gcctgtccaa aatctgccaa acgtggctgg acgaggaggc ggcatgaagc
    21541 tgccgcgcaa ccgcttcagc ctgctttccg cattgtggtt tgccggcggc atctattcgc
    21601 tgctcttcaa agctgccgac accgcgccgc cgccgtttcc gcatttcgac aaagcagcac
    21661 accttgccct gtttttcgca caaatctggc ttttgaccaa agcattcaaa accggaaaac
    21721 ttcccatccc ctaccgcagc ctgatggtct ttgccctctg tttcgccctc ttcagcgaat
    21781 gcgcgcaggc atggtttacc gcaacgagaa ccggcagttt gggcgatgtt cttgccgata
    21841 tggcaggtac ggttctcgca ctctttgccg cccgcgccgc cgaccgcccg gactgaatcg
    21901 gtttatttcc cccaaacagg atgcacctct tcccgataca tcctattttt ccccttacat
    21961 atcaatccca tctcataaac aaaaccgaca aatcgtttac aatatattta cactacatca
    22021 gattacaaat atactcgaac cagttgtaga atcggcggtt ccacaaaccg tttcggattg
    22081 cacgacacaa aagaaaaacc gattttattg ccttaaagga gtattcatga acctgcatgc
    22141 aaaggacaaa acccagcatc ccgaaaacgt cgagctgctc agtgcgcaga agccgattac
    22201 cgactttaag ggcctgctga ccaccattat ttccgccgtc gtctgtttcg gcatttacca
    22261 catcctgcct tacagccccg atgccaataa aggtatcgcg ctgctgattt tcgttgccgc
    22321 actttggttt accgaagccg tccacattac cgtaaccgca ctgatggtgc cgattctcgc
    22381 cgtcgtactc ggtttccccg acatggacat caaaaaggcg atggctgatt tttccaaccc
    22441 gattatctac atttttttcg gaggcttcgc gcttgccacc gccctgcata tgcagcggct
    22501 ggaccgtaaa atcgccgtca gcctgttgcg cctgtcgcgc ggcaatatga aagtggcggt
    22561 tttgatgttg ttcctcgtta ccgcctttct gtccatgtgg atcagcaaca ccgccaccgc
    22621 cgcgatgatg ctgcctctag caatgggtat gctgagccac ctcgaccagg aaaaagaaca
    22681 caaaacctac gtcttcctcc tgctcggcat cgcctattgc gccagcatcg gcggcttggg
    22741 cacgctcgtc ggctcgccgc ccaacctgat tgccgccaaa gccctaaatc tggacttcgt
    22801 cggctggatg aagctcggcc tgccgatgat gctgttgatt ctgcccttga tgctgctctc
    22861 cctgtacgtc atcctcaaac ctaatttgaa cgaacgcgtg gaaatcaaag ccgaatccat
    22921 cccttggacg ctgcaccgcg tgatcgcgct gttgattttc cttgccacag ccgccgcgtg
    22981 gatattcagc tccaaaatca aaaccgcctt cggcatttcc aatcccgaca ccgttatcgc
    23041 cctgagtgcc gccgtcgccg tcgtcgtctt cggcgtggcg caatggaagg aagtcgcccg
    23101 caataccgac tggggcgtgt tgatgctctt cggcggcggc atcagcctga gcacgctgtt
    23161 gaaaacatcc ggcgcgtccg aagccttggg acagcaggtt gccgccacct tttccggcgc
    23221 gcccgcattt ttggtgatac tcatcgtcgc cgccttcatt atttttctga ccgagttcac
    23281 cagcaacacc gcctccgccg cattgcttgt accgattttc tccggcatcg ctatgcagat
    23341 ggggctgccc gaacaagtct tggtattcgt catcggcatc ggcgcatctt gtgccttcat
    23401 gctgccggtt gccacaccgc ctaacgcgat tgtgttcggc acgggcttaa tcaagcaacg
    23461 cgaaatgatg aatgtcggca tactgctgaa catcctctgc gtagtattgg ttgctctgtg
    23521 ggcttatgct gtactgatgt aaaccatcga cctaaacaac aagaccgtct gaaagaatat
    23581 ttttcagacg accttgaagt ttgtcgttca gacacaattt gtcgaatcat tcaaaaccgg
    23641 attctaacga aaggaaaccc atgattatcc tgcacaccaa caaaggcgac atcaaaatcg
    23701 aactcgattt cgacaaagcc cctgttaccg ccaaaaactt cgagcaatac gtcaaagacg
    23761 gcttctacga cggcgtaatc ttccaccgcg tcatcaaagg cttcatgatt caaggcggcg
    23821 gcatggatga aaacatgaac gaaaaagaaa cccgcgatcc gattcaaaac gaagcgtcca
    23881 acggcctgcc caacgataaa tacaccatcg ccatggcacg cacttccgac ccccattccg
    23941 ccagcgcgca attcttcatc aacactgccg acaacgcttt cctgaacttc cgttctaaag
    24001 agctgtacgg caaaaccgtc gtccaagact ggggctatgc cgtattcggt aaagtcgttg
    24061 acggttttga tgttgtcgat gccatcgaag gcgtatccac caaacgccac ggctaccatg
    24121 acgacgtacc gagcgaacct gtcgtcatca ttaaagccga agcggtataa accggcaatc
    24181 cgaaagcagc ctgcacaaag gctgcttttt ttgtttcagg cggcataaaa tccaagcaca
    24241 tatgccgtct gaacacctcc cgcaagcctt cggacaatgt tgcaacgtgt taaaatagcc
    24301 tcctttcctg aaaccacaac aaggaaacca tcatggcaaa tattgcccgc gacatcttca
    24361 aagcctacga catccgaggc attgtcggca aaaccctgac cgacgatgcc gcctatctca
    24421 tcggcagggc catcgccgcc aaagccgccg aaaaaggcat gacccgcatc gcgctcggac
    24481 gcgacggacg cttgagcggt cccgaactga tggagcacat ccaacgcggc tttaccgaca
    24541 gcggcatcga cgtcctcaac gtcggtatgg tcgccacgcc catgctctat tttgccgcca
    24601 tcaacgaatg cggcggcagc ggcgtgatga ttaccggcag ccacaatccg cccgattaca
    24661 atggtttcaa aatgatgctc ggcggcgaca cgctcgcagg cgaagccatt caagaacttt
    24721 tagccattat tgaaaaagac ggttttgttg ccgccgacaa acaaggcaac gtaaccgaaa
    24781 aagacatctc cggcgaatac cacaaccaca tcgtcggcca catcaaactc aaacgcccga
    24841 tgaacatcgc tatcgacgcg ggcaacggcg tgggcggcgc gtttgccggc aaactctata
    24901 aaggcttggg caacgaagta accgagcttt tctgcgacgt ggacggcaat ttccccaacc
    24961 accatcccga cccatccaaa cccaaaaacc tgcaagattt gattgccgcg ctgaaaaacg
    25021 gcgatgccga aatcggcttg gcgtttgacg gcgatgccga ccgcttgggc gtagttacca
    25081 aagacggcaa catcatctat ccagaccgcc aactgatgct tttcgcgcaa gacgtgttga
    25141 gccgcaatcc taaagccaaa gtaattttcg acgtcaaatc cacccgtctg cttgcgcctt
    25201 ggattaaaga acacggcggc gaacctgtga tggaaaaaac cggccacagc tttatcaaat
    25261 cctccatgaa aaaaaccggc gcgccggttg ccggcgaaat gagcggacac atcttcttca
    25321 aagaacgctg gttcggcttc gacgacggtc tgtacgccgg cgcacgcctc ttggaaatcc
    25381 tgtctgcctc cgataatccg tccgaagtgt taaacaacct gccgcaaagc atttccacgc
    25441 ccgaactcaa catcgccctg cccgaaggca gcaacggcca tcaggttatc gacgaactcg
    25501 ccgccaaagc cgaatttgaa ggcgcaaccg aaatcatcac catcgacggt ctgcgcgttg
    25561 aatttcccga cggcttcggt ctgatgcgtg cttccaatac cacgccgatt ctggtgttgc
    25621 gttttgaggc ggatacgcaa gaagccatcg agcggattca aaaccaattc aaagccgtca
    25681 tcgaaagcaa tccgaatcta atctggcctc tgtaaacaca ggaaaaatgc ttaatcaaat
    25741 cttggtagat tggatttggc ttaaaaatct ccgcgtccgt tcgtgtttgg ggtggtcgaa
    25801 caactctttc gggctgccct gctctacgat aacgccgccg tccatcacga caacggtcgt
    25861 ggcaacttcc agcgcgaact tgatttcgtg ggtaacgacg accatcgtcc aaccttcccg
    25921 cgccaattcc ttcatggcgt tcaacacgtc ttgcaccaat tcagggtcga gtgcggaagt
    25981 gggttcgtca aacaacatca gctcgggctg aatcgccaat gcgcgggcaa tgccgacgcg
    26041 ctgctgctga ccgccggaaa gctggtaggg atacaaatcc actttgtcgc ccaagccgac
    26101 tttttccagc agtttcagag cctcttcgcg cgcttgggcg gcaggcttgc cctgtacggc
    26161 aaccggtcct tccattacgt tttccaaggc ggttttgtgc ggaaagaggt tgtattgttg
    26221 aaacaccatg cctgatttgc ggcgcagtgc caaaatatcg tgtttgcttg gttttttaga
    26281 aaaatcgatt ttcagcggtc gctcgttgtc gaactcgatt tgtccgtctt cgggcatttc
    26341 caacgcgttt aggcatcgca gaaacgtcgt tttgcctgag ccggaaggcc cgaggataac
    26401 gaccacctgc cctttgccca catccaaatc gatgccgcgc aaaatagtgt tttcgccgaa
    26461 ggtcttatgg atattgcgga ttttaatcat aacaactcct tatttggcga cataacggtc
    26521 gaaacgtttt tccaaacgtg cctgaatcag gaacagaacc ttgcagaaac accagtaaac
    26581 caatgcggct tcaatataga cgggcaaaaa gtcgtaagtg cggtttgccg tttcctgcgc
    26641 gacgcggaac aattcagtta ccgttaccac cgctgcgagc gaggtgtttt tgaacaagcc
    26701 gataaactcg ttgctcaaag gcggcacggc aacgcggaat gcctgcggcg cgacgatgcg
    26761 gcggaacgtc tgcatatagg tcataccgat ggagaaacct gcttcccatt ggcctttagg
    26821 tacggacaaa attgccgcgc gtatggtttc ggaagcgtat gcaccgacat tgagcgagaa
    26881 gccgataatg gcggcgggaa tcggatcgat atagataccg acggacggca gcccgtaaaa
    26941 cacaatcaca agctgcacca acagcggcgt accgcgaatg acggaaatat aaaattccac
    27001 caatttcagc aggattttcc gcgcaatgcc gccggcgggc ataatccgca ccaaagccac
    27061 ggctacggca ataaccatac cgataacgaa agaagctgcc gccaaaggca gagacaccgc
    27121 gaagccggct ttgaccatag gcaaaaacgc gctgacaatc atatcggcgc gtgtttccgt
    27181 cataaacggc agcgaagcaa ggaaattatt gaacactgat gtcttttccg aagaattgtt
    27241 cgcccagttt tttcagcgta ccgtcggctt tcagctcgtt gattgccgta ctgaatttcg
    27301 ccacggcttc gtcattgccc ttgttgacaa tcaggccgga accgactttt tcatcggcag
    27361 gtgcggacca aacgattttc acgcccgcat tcgggttttt cttcagatag tccaaaaccg
    27421 ccaattcgtc gttcagggtt gcatcggcac gtttttgttc aatcagggtc agcgattgcg
    27481 ccaaaccgtc cactgccacc aaatctgcgc ctgcagcttt ggctttttcg ccgtagttgc
    27541 tggtcaggga ttgtgcggtt ttcacgcctt tgatgtcgtc gatagatttg atgttgctgt
    27601 cgttacgggc aaccaatacg gcaccgctcc agctgtaagg atcggatttg tcgaatgtcg
    27661 cttggcgttc ggggctggtc agaccgactt ggtttgccac cacgtcgaaa cgccccgcct
    27721 tcaaacccgc catcatcgaa tcccattgcg tttctttaaa ctcgactttc acgcccagtt
    27781 tttccgccac ggcgcgggtt acttccacat cgtaaccggt cagtttgccg tccttgtcgt
    27841 ggtaggtaaa cggtgcgtaa gtgccttccg tgccgacggt aaccgtgcct ttattgttga
    27901 tgcgctcgat taaagaaccg gaaactgccg attgtgcagg cgcggaagat gctccgctgc
    27961 cgccttccga accgccgcag gccgccaaaa ccaatgcggc aataccgccg agtacgaatt
    28021 ttttcaacat catcctctcc tgtaaaaagt gtgcaagtgc ggcattctaa gtgaaattgc
    28081 ggcaaacaca aagaatcctt tttttatatg gttattccaa atcggaatgg aaaagatatg
    28141 ccgaagccgc cggaagcgga aataaagggg gcgggaaagg cggtgggcgg cacgaaaccg
    28201 aaaagcggca tcaggtatgc aaacggcgga ttcacgcacg ccgttccggc aaaaatccgc
    28261 ctgccgattc ggtgctataa tccatccgaa acagatgaca ccaaaaagga acatctcatg
    28321 aacacgcccc aatccgccat cattcccgac cacgcccaag ccggcatctt tatcgaagcc
    28381 gacttcgccg ccaaccgcct caacgatatt aaagccgcct gccgcgcttc gctcgacgcg
    28441 ttaactgcct tgaaagcccg ctttccggac gatattttgg gtctgaccat cgccttcggc
    28501 agcaaagcct gggcaacatt cggacatacg gacgaaggca gtgaaatcaa acccttctcc
    28561 gaaatgggca acgggcttgc gccgtccacg cagcacgata tgtccatcca catccaatcc
    28621 ttccgccaaa acgccgccta cgcgcttgcc caatccgttt taggcgcgtt cggcgacagc
    28681 atatgcgtcg cgtccgaaga acacggtttg cgcctgtatc aggatcgcgg actggacggt
    28741 ttcgtcgacg gcacggaaaa cccgcagggc gatgaaaatg tccgcgaagt cgccatcatc
    28801 cccgaaggaa aacccgatgc gggcggcagc tatgtcctgc tgcaaaaata cctgcacgat
    28861 ttgaaaaaat gggatgccgt ccccgtcgcc gaacaggagg cctcggtcgg acgcggcaag
    28921 gaaaccgacg acgaattcgg ccgcgatgtc cgcctgcccg attcgcacct cggccgcgtc
    28981 aacctgaaag aaaacggagt cggcctgaaa atcgtccgcc gcagcctgcc cttcggcaaa
    29041 atcagcggcg aacacggttt gatgtttacc gcatactgcc gcacgctgca caatatcgaa
    29101 gcgcaattat tgagtatgtt cggcgacacg gatggcaaaa ccgacctgct gctccggcac
    29161 ctctccgccg ccgtttcggg cggatactac tacgcgccgt ctgtcgaacg cctgcaaaac
    29221 ctctaagcca gacgatgccg tctgaaaccc tttttcagac ggcattttcc cgttttaccg
    29281 tccaaccgtt ttccgagcgc gcactatgtc tgcacccatc caagcatttg acccgctgac
    29341 cgtccccatt gccggcacca acctgattga ggcctctgcc ggcaccggca aaacctacgg
    29401 catcgccgcc ctgtttacgc gcctgatcgt attggaacaa aaaaacgtcg agcgcgtatt
    29461 ggtcgttacc ttcaccaaag ccgccaccgc cgagttgaaa acacgcctgc gcgcacgttt
    29521 ggacgatgtg ttgcaggttt tagaaagtaa agaaattgcc aaacttggag acgacacgct
    29581 ttcagacggc atcgccgcct actgcgccga acaccacaaa ggcgacacct tcctgcccgc
    29641 actcttaaaa caggctttgc aaaaagaggg ccggacgcgt ctgattgtcc gcctcaaggc
    29701 cgccatcggg caattcgaca acgccgccat ctataccatc cacggcttct gccaacgtat
    29761 cctgcgcgac tacgccttct tgtgccaagc accgttcgat gtcgaactga ccgaagaaga
    29821 cggcgaccgc ctgcttatcc cggcgcaaga tttttggcgg gaacgcgtca gcaatgatcc
    29881 ggtgcttgcc gcattggcgt ttaaacgcaa agctgtgccg caaaccgtcc ttgcccaaat
    29941 ttcgcgctat ctttcccgcc cgtacctgaa tttccgccgt ccgcaggcgg atttgaaaca
    30001 ggcgcagcgc aacgccgaaa cctcatggca aaccatctgc cgcctgctgc ccgagctgga
    30061 agccggcttt tggcgcatcc atcccgacct caacggcaac agttaccgca aaaacagctt
    30121 cggcaacctt tttaaagaac tggcacaaaa atccgccgcc ggacaactgc cctttctgga
    30181 caaagacacg cacgacagac tcttgaaact tgcgtccgac aaactcgaag ccgcccttaa
    30241 aaaaggcaaa acgcccgatg cggcagcatt tgccgaattg cagaaactgg cagacttcgg
    30301 gcgcgatttg aacgcactcg aagaagcgga agaagcaaca atgatccggc tgcaactgga
    30361 tttaatcgga tacctcaacc gcagccttgc cgagatgaaa aaatcgcgcc gcgaacgcgg
    30421 tttcgacgac ctgctgctcg atgtccacac cgcgctgacc gacaatccgc acgccgaaac
    30481 cctcgcccgc gccgttgccg aaaactggga aaccgcgctg atcgacgagt tccaagacac
    30541 cgacccgctg caatatgaaa tcttccaaaa gattttcatt gcccaaaacc gcccactgtt
    30601 tctcgtcggc gatcccaaac aggcgattta cagctttcgc ggagcggaca tttacgccta
    30661 cctgcaagcc gccggagacg cgcggcaccg ctacacgctc gccaccaact accgcagcca
    30721 cgccgcgctt atcggcagca taggcgcgct gttccgcctc aaagaacgcc cgttcgtttt
    30781 ggaaaacatc ggctattcgg aagtcggtgc ggcgcgtgcc gaaagcaggt tgtcccccga
    30841 acgtcctgcc gtacaggttc gttggctgca cgaaaacgac aatgaaaaag ccaacaaaga
    30901 cgttttgcgc cgccgtgccg ccgactattg cgccgacgaa atcgcccacg cgctcaacga
    30961 agccgccgga ggccgtctga atttcaaagg ctgcccgttg cagtcgggcg atattgccgt
    31021 gctggtacgc acgcacaacg aggcggtgat ggtttccgcc gccctgaaaa aacggcaggt
    31081 gcaaagcgtc ctgctttcgc gcgaatctgt gttcgcctcg cccgaagccg ccgccctgtc
    31141 cgcactcatc ggcttctggc tcgaaccgcg ccgcgccgga acgctgcgct ttgtcctgac
    31201 aagcggcata ttcggttatg acgcgcagca attgcacgac ttcaaccaaa acgaaagcga
    31261 gattttgcat tgggcggaat ctgcccgaac cgcactcgac aactggaatc aatacggcat
    31321 tttcgccgct atgcagcaat tttcccaaac acacggcatc gaaacgcgcc tcttaagccg
    31381 gaacaacggg cgcagcctga ccaactattt ccaactgctc gaactgcttg ccgccgaaga
    31441 cgcgcaaaac cgcaacccag ccgcgctgca caaatggttg cgcgaccaaa tcagcctggc
    31501 cggcaacaac agcggcgaca accgcgccat ccgtctggaa agcgacgaag atttggtcaa
    31561 aatcgttacc atgcacgcct cgaaaggttt gcagtatccg ctggtgtact gcccgtttgc
    31621 gtgggacgcg caagataccg ggccgtccga ctggcaaatc ctccaccaaa gcgcaaaccg
    31681 aaccgaactg ttggcaaagg cgcaactgtc ggaagacgaa cagaaacaat acgccgatga
    31741 agaaatggcg gaacgcctgc gcctgcttta tgtcgcactg acgcgtgccg aggaacagct
    31801 caacatctac gccgcgtact ccaccaatac tgccgacaac cccctcgcct acctgattga
    31861 aggctcgccc caagacagcc gtgaaaccgt ccgccgtgcc tatgcgtgtg aaaaagacgg
    31921 catcgcgatg ctcaaacgca actggcggcg cgtggcggac aacgcccctt ccggcacaaa
    31981 tttcgccttc accgaaaatg cgccgccccc tgccgcctat cgcagcaacg ccggtcaaac
    32041 cgccgaattt gccgcaaaca gcattcccga acgcggattc cgatttgtcc gccacactag
    32101 ctttaccgcc ttaagccgcc atacccaaac gcccgacggc ggcgaagaag atgcctgccc
    32161 gtccttggat gccgccgaaa cctcggtgcc ggcgatgccg tctgaaacgc cgacggcttc
    32221 agacggcata tcgatacacg attttccgaa aggcacgcag gcggggctgt gcctgcacga
    32281 aattcttgaa gatttcaaat tcggacaagc agccgccgga caggaaaccc tcattgccga
    32341 caagctgaaa aaatacggtt ttgaagaaat atggctgccc gccgttgccg aaatggcgga
    32401 agcctgccgc aaaacgccgc tgacgggggc atacgacctg tccgacatct cacccgagtg
    32461 ccgctgtccc gaaatgggct ttaccctcca caccgaagac ttcagcctca aacgcctgcg
    32521 cgactggttt gcccgcgacg acatcaggct gcccgaagtc tgccgtgccg ctgccgaaac
    32581 gctcgacttc cacaccgtca acggcttttt aaacggcttt gtcgatatgg tctgccaaga
    32641 ccccgacggc aatatctgcg tcatcgacta caaatcaaac cacctcggta cggacgcatc
    32701 cgcctacacg caacaggcaa tggacgaagc cgtcgcacac caccactatt accttcaggc
    32761 actgatttac gccgttgccg ccgcacgcta cttcaagctg cgcggacaac cgcccgccgc
    32821 cgtttccgtc cgctacctgt ttttgcgcgg attggatggc aaaggcggcg gcgtttggcg
    32881 ttgggacata gatgccgccg ctttggaaca gataaaataa cttcccgtcc tttcggacaa
    32941 caaccgcagg aaaaccctat gaatatcaaa cacctgatta ccgccgcact cattgcctca
    33001 gccgcctttg ccgcgcaggc agccccgcaa aaacccgtat ccgccgccca aaccgcgcaa
    33061 catccggccg tttggatcga tgtccgttcc gaacaggaat ttagcgaagg gcatttgcac
    33121 aacgcggtca acatccccgt cgaccaaatc gtccgccgca tacacgaagc cgcgcccgac
    33181 aaagacacgc cggtcaacct ctactgccgc agcggacggc gtgccgaagc cgcccttcaa
    33241 gagctgaaaa aagcaggtta tacaaatgtt gccaatcacg gcggttatga agacctgctc
    33301 aaaaaaggga tgaaatgacg caatgccgtc tgaaaggaca ggctttcaga cggcatacgg
    33361 cgttccggca cgcggcgcaa catcgggcgc ggcgcgcgcc gccccgtccg aagcctgata
    33421 aacaaaccga taaggaacaa tgatgtttca cgacacataa agcaccgccc tatgtgttgc
    33481 cctgatttgg aaagggttac acccctcccg aataaagtct gattctaccg tttcaaccaa
    33541 aaaggaaaaa ggaaatacga tgaaacacat actccccctg attgccgcat ccgcactctg
    33601 catttcaacc gcttcggcac accctgccgg caaaccgccc acccaaaacg aaaccgctat
    33661 gaccacgcat accctcacct cgaaatacag ctttgacgaa accgtcagcc gccttgaaac
    33721 cgccataaaa agcaaaggga tgaacatttt tgccgtcatc gaccatcagg aagccgcccg
    33781 ccgaaacggc ttaacgatgc agccggccaa agtcatcgtc ttcggcacgc ccaaagccgg
    33841 cacgccgctg atggtcaaag accccgcctt cgccctgcaa ctgcccctgc gcgtcctcgt
    33901 taccgaaaca gacggcaaag tacgcgccgc ctataccgat acgcgcgccc tcatcgccgg
    33961 cagccgcatc ggttttgacg aagtggcaaa cactttggca aacgccgaaa aactgataca
    34021 aaaaaccgta ggcgaataag cccgtcgccg acatatggcg gatggaaatc aaatgccgtc
    34081 tgaaacccga tttcagacgg catttccttt caatccctat cttcccgaca aatatcaatg
    34141 gcttcctgca aactcgaaac gccgtagatt ttcaggttcg gaaactcttt ggcgttgcgc
    34201 ggcatattgg ctttggggac gatggcgcgt ttgaagccga gtttttccgc ttctttgagc
    34261 cgctcttgtc cgcgcgcgac ggggcggact tcaccgctca aaccgatttc tccaaatgca
    34321 accatttttt cgggcagcgg gcggttgcgg aagctggaaa gcatcgcgag gatgactgcc
    34381 aaatccgccg ccggttcgcc gattttcacg ccaccgacgg cgttgaggaa cacatcctga
    34441 tcgaaacagg cgatgccgcc gtgtcggttt aacacggcga gcagcatcgc gaggcggttt
    34501 tgttccagtc cgacggtaag gcgtttgggg gtgaatccgt gcgcgtcatc gaccaatgcc
    34561 tgaatttcaa ccaaaagcgg tcggctgcct tcctgcgtaa ccaaaacgca cgaaccgggc
    34621 gtgtcgtcgc ggtagctggc aaggaagatg gcggacgggt tggacacacc tttcaaaccg
    34681 ttttccgtca tcgcgaacac gcccagttcg tttgccgcgc cgaagcggtt tttgatggcg
    34741 cgtatcatgc ggtagttgga atgttggtcg ccctcgaaat acagcacggt atcaaccatg
    34801 tgttccagca cgcgcgggcc ggcaatcgcg ccgtctttgg tcacgtgtcc gaccagtatc
    34861 atggcgatgc ccatctgttt cgccatgcgc gtcagttggg cggcacactc gcgcacctgc
    34921 gacacagaac cgggggcgga agtgatttgg tcggaataca tggtttggat ggaatcgata
    34981 accacgactt cgggctgatg ctgtttcaac gctgcttgaa tcgcttccat gcggatttcg
    35041 gcaagcaggt tcacgccttc ggtgggcagt tccaaacgct gcgcgcgcag ggcgacctgt
    35101 tgggcggatt cttcgccgga aacgtatagc actttacggc tttgcgccat tttggcgatg
    35161 gtttgcagca gcagcgtaga tttgccgatg ccggggtcgc cgccgagcag gatgaccgca
    35221 ccatcgacca aaccgccgcc caatacgcgg tcgagttcgc ccatgccggt cggattgcgc
    35281 ggcacttcgg tggcggtcac ggaggagagg gattggacgg tcgaggtatc cgccgcccaa
    35341 gattggaagc gggcgttttt cggctcgggc gcggccaagc tttcctgaag tgtgttccac
    35401 tcgccgcaat gcgggcattt gccctgccat ttcggggaag tgccgccgca ttcggtgcat
    35461 tggtaaaggg ttttaagcgt ttttgccatc ggttttccct acatctgaaa acaaaaatgc
    35521 cgtctgaaaa tagggacggt tgggattgcg ccaatacggc aacaccgccg ccgtcatgta
    35581 ctatccgtac acggcggata ttgccgcatt gccttatttt taccctaacc ggccatctct
    35641 cggcttcaaa cggcatatcg ggcagtttcc tgccggctta cccgccgtga tactgccgcg
    35701 acagctcgtg tacggtgtcg actaagattt tggcgtgttc ggggtcggcg tgttggttga
    35761 tgccgtgtcc gaggttgaag acatggccgc tgccttgtcc gtagtcggct aggatgcgtg
    35821 cgacctcggt gcggatggat tccggcgtac cgaagagggc gaacgggtcg aagttgcctt
    35881 gcagggcgac ttgcttgccg acgcggcggc gtgcttcgcc tatgttgcac gtccagtcca
    35941 agcccaatgc gtctgcgcca atttctgcca tgctttccag ccacagcccg ccgcctttgg
    36001 caaatacgat aacaggcacg cgtctgcctt cgctttcgcg tttgagtccg gcgacgatct
    36061 ggcggatgta tttgaggctg aattctttaa acgcctcatc gctcaagacg ccgccccaag
    36121 tgtcgaaaat ctgcacagcc tgcgcgcccg cgtcgatttg ggcgttgaga taggcggtaa
    36181 cggcttgagc attggtatcg aggattttgt gcagcaaatc ggggcgcgag tacatcatgg
    36241 ttttgatggt gcggaattct ttgctgctgc caccttcaac catgtagcag gcaagtgtga
    36301 acgggctgcc ggagaagccg ataagcggta cgcggccgtc cagtgcttta cggatggagc
    36361 tgacggcatc aaagacgtat tgcagttttt ccatatcggg gacgtgcaat ttggcaatgt
    36421 cgtcctcgtg ttgcagggcg cgtttgaatt tcgggccttc gccttcggca aaatacagtc
    36481 ccaagcccat tgcgtcaggg acggtcagga tgtcggaaaa caaaatcgcc gcgtccaaat
    36541 cgaaacgttc caaaggttgg atggtaactt cggtcgccaa ttcggtgttt ttgcacaaat
    36601 cgaggaagct gcccgctttc gcgcgtgtgg ctttgtattc gggcagataa cgccccgcct
    36661 gacgcatcat ccaaatcggc gtgtattcga cgggctgttt aagcagggcg cggaggaagg
    36721 tatcgttttt taaaagagtc atacgggttt tctgtcagtc tgtttgtcaa gtgaaatggt
    36781 tttcagacgg catttcaacg atgccgtctg aaggtttcaa caggtttcgg cggaaggtcg
    36841 gttttcctcg gcaacgcttg ccaaaaccaa gttgcgctgc gcctccgcct tctgcggttc
    36901 tccggtttcg tcaaaaacct ttgccaaaac caaacgcgcg gaaatactcg gctttaatgc
    36961 aatgctcgct tcaaggtagc cttttgcctt gccccaaagt ttgcggccgt aggcgagccg
    37021 accgagatac atcagcagaa gcgcgttatc gggctgttct ttcagccaag catcggcaaa
    37081 atcgatggct ttctgctgat cgcgttcgcc caaaaagcgc acgctttcga caaaggcttc
    37141 caaaagctcg gggcggcggt tgtgcggata atgctgtttg acccatttga ccgcatcggc
    37201 atacagtccc aaacgttcgt acttttccgc aaccgatacg ctcaattccc cgtttttgag
    37261 gctgtcggga atccgcttca ggcaggtttt caaagcggcg gcatcggcag catccgccag
    37321 ctggcggcgg tatgcccaat tttgataccg ttccatttcc gatttgccca acgcgcccgc
    37381 cttggaaagt ttttcggttt ttgccagaac ctgcaacgcg tcgcccctgt cgaaagcgta
    37441 acgaagttgc agacgcacga ggcgcgtaag gttggcattc atcttcgccg ccgcatgaag
    37501 attggcttcc gccgcttcgt aatcgcgccg gttcaacgcc gattccgcca acaaaagata
    37561 acgggaaagc tgctgctttt ccggcagttt ggcgatttcc gcaagataac ggtcgcgcag
    37621 ctcgatgttt tccatctgcc cggcggcatg tgcgcccaac atcaatgcca aagtccggtt
    37681 gtctccggcc tctttgttga ccaacacgcg tgaggcttct agttccgcct tttcaaaacg
    37741 cccttcaaaa tacgccaaac ccgccttgtt caaggcaagc gcggccttgc ggcctttacg
    37801 cgccgaaccg aaacgctgca tcttttcggg gatattgaat acgccgataa tgaatttgaa
    37861 caggaaatac cacaccacga cggcaatcag cgaacctaac acaaaggcgt gcaggttgat
    37921 tctgagcatg gtctgtccga gtacgatata cacgtcgccg gtgtaaatgc ccgaagccag
    37981 tgccagtccg acggcggcgg caaacaggac gacaatccag actaccgttt tcatgcgcgt
    38041 tctcctttag cggacggcga acgccctgcc ttttccggta cgggctgttt ttttgcaggc
    38101 tgttccggtt tgcgttccga aggcagggac ggtgcttcta tggtcttcac atccgatgcg
    38161 gcagccggtt cggaagctgt gttttcgttt gccggttcgg aagtcgcctg ttccgcttct
    38221 tgattttccg ccgtcgtcat gcgcgtaccg tcgcgatagg cgcggacggc atttaggctg
    38281 tttttcaaac cgtcatccgc cgtcatgcgc acatccaacg ccttcaattc cgccaattcc
    38341 ttcaaccacg actgcgtggc gggggatttg gcatcaaaat actgtctgac ggcggtttcg
    38401 gcattgttca aatcgccctg atagacttcg ctgttgcgct gcattaatgc agtccgcgca
    38461 tccaaaaggc ggagacgcag gttttcacgc acaaaatagg cctgttcggg agaaatcagc
    38521 atggcatcgt tgttttccaa acggcggatt tcgaccagcc ccttcaatgt gccgagggat
    38581 ttttcccata cgttctgcca ccatgaagcg gaaacggctt cgttgcgtgc ctgtacgctc
    38641 ggtttcaata cgccgtccaa aatcagcggc agtccggata cggcgatttc cagcctgtcg
    38701 aggcgcaatg ccgtgccgga aatatcgaca tagggacggt ttttcagttc cgccaagtcg
    38761 ctgctgaccg cctgcttgat cggcagaagc tctgcctgat tgaaacggga caggcggctg
    38821 tcgatatgct ccaatacgcc gactgccgtt tggatattgc cagtcaacac cagctgttgc
    38881 gccgccagat tgagtatggt ctcggtttcg tccaccagcc aatcggcgcg tcctttggtc
    38941 aactcgcgat aggatttttg catttccaag atttgttcgc cgtttgcttt gacgtttccg
    39001 tccaaacggt cgagctctga ttgtatggcg gcttgccggt tgaggttgtc tttgagcagg
    39061 gcggcgtttt ccgactcgcc caaagcggct ttgtcgattt tttggttgaa tgccagctct
    39121 tggtttttca agacattctg tccttggaca aacaaaaaac cacttgtacc caaacccaat
    39181 gccgccaata ccagggcgca gactgccaaa gcgttgctgc cggactgttt gacgataaaa
    39241 ggagcggcag gaatgtgtac ttctgtttcg ttttctttgc gtggggaaga ggtttcagac
    39301 ggcatttctt ttgatgcctg tatctcgcgt acgggttcgg atgatttgtt ttcaggttcg
    39361 cccaccgttt tgctccttat taatttgagg ttccgggaaa gaccatgccg tctgaaacgg
    39421 aaatggaaga atgggaaagc gcggcttcca gcgtagggac ggtttcgacc gaacacacgc
    39481 cttcgcgctt caatgcctcc gcaatgcgcg gatgatgggt aaagtatagc aaggatttga
    39541 agaatcggga aaattgcggc ggaagctgcc cgaacagcaa gcgcaccagc tcggtcgacg
    39601 taatataggc ggcggcaata ttttcggttt ggaaattttg aaagttcaaa ggtttatgcc
    39661 gtctgaaata gacttctgcc atctccgtcc gaaaaccttt ctcctgcaag gcattcatca
    39721 gaaaatcccg cccgccgtgt ccgcgcacaa acaatacgcg tgcaccttcg ggcagactgt
    39781 tccaaaccgg caggcgcaaa accgcctcgc tgtcgtttcc gtcatgaggc gcaatgaccg
    39841 ttctgcccaa atagcgttcc aatgcgcggc ggctgccctg ccctacggca atgtgtatct
    39901 ttatgccgtc tgaaaggtta aggtacggga cggcggtttc aacggcggtc ggactgaccc
    39961 aaaacacggc atccgcacgg gcatattgtt cggacaaaag ttccagtccg gcagcatctg
    40021 cttcgatttc aatcgggctc aacacttccg cctgccatcc ggcacgacgg caggtttcca
    40081 catcgtcctt cgccctgccc gacggtcgga caatcagcat gatgggtttc gctgtttcca
    40141 tcgccttatc cgccccgatt accgggaaaa atcagcatcg ttgaaattcg cctgcgcggt
    40201 ttgcggcgta cagccgaccc gtgcgacttc cttgccccta cgctccacaa cgacaccgct
    40261 gctttccgta tgagtcacgg aatcgaagcc tgtccatatg gtgtacataa attcgccgtt
    40321 ttggaatttc atcgttgccc aacgaccgct gcccatacct tgccacctgt cggaacgccc
    40381 cgacagatca gctttgctgt tgcgtatggc aatttctttt tttgccgcac tgccgaacga
    40441 atattcgtaa agattgcggt tgattttttg aacttctata tatttgttgt tgtccgtttt
    40501 acaggaaaac accgtatccg cccacaccgt ttgggcggca gccgacagaa gcaatacggc
    40561 agaaaggaac atttttttca tcgtatttcc ttaatggttg aaaccccgcc actcggacat
    40621 ccgtccttcg tggcagcagc atcagatttt atttgagagg ggtgtaaccc cttccaaatt
    40681 agggcaacac atagggcaac gctttatgtg tcgtcctgtg tgttgaaaca tcattgcccg
    40741 tatcctgaaa tagaaaagaa aatgcccgtt ttacggtctt ctttccgaca aaatgccgtc
    40801 tgaaacggat ttcagacggc atggtcgaaa attattgcgc ggcaagcggc ttgagcagca
    40861 aggtttcgcc gctttgcaca actttttcaa gcaggtcgat attgggatgc ttgccgggat
    40921 gggcgcgcgc gtcggcaacg tgttcggcaa accatatcaa accctgttct gccgcttctt
    40981 tgtccaattt tccgtcaaaa cgttctgcca aagcgttgta caacttgagc gaaccgagct
    41041 taccctgaac ggcaggaatg tggtgaaccg ttttgccatc tgcatcctga acgtccaaac
    41101 cgcccagatg gtcgattgaa ggaaatgtgg cgagatagtc ttgaaaattc atatcaactc
    41161 cgaaaatcag tcagttagcg cgtgccgaaa atcttgtcgc ccgcatcgcc caagccgggg
    41221 atgatgtagc cgttctcgtt caagtggctg tcgagcgcgg cggtgtaaat cgtaacgtcg
    41281 ggatgcgcgt cgttgaccgc cttcacaccc tcgggcgcgg caaccagcac cagtgccttg
    41341 atgtttttgc agcccttggc tttcaaaagg tcgatggtgg caaccatcga accgcccgtc
    41401 gccagcatcg ggtcgataat cagggcagga cgttcgtcca tgctgtccac gaatttctcg
    41461 aagtaggaaa cgggtttcag cgtttcctcg tcgcgctgca gtccgactac gctgattttg
    41521 gcagtcggaa tcaggtcgag tacgccgtca agcataccca aaccggcacg caggatggga
    41581 acgacggtca atgttttgcc cttgatgcgg tcgccttcaa tctgaccgca ccatccgtcg
    41641 ataaggtatt tttcgatttc aaaatcacga cttgcttcgt acgccatcag gcgcgccagc
    41701 tctgtggtaa gcgttcggaa tttgtaggtg ctgcaatctg cctccctcat cagggttaat
    41761 ttgtggcgga cgagcggatg gttgataacg ttaacgttca tcgcggtgtt ccagtgtgat
    41821 tttgagacgc gccattatac ttttttttga tttgccggaa aagaaaatgc cgtctgaaac
    41881 acgttcagac ggcattgccg aatccatcag gctttcagca gctcttgcag ctcgcctgcc
    41941 tcatacattt ccatcaggat gtccgaaccg ccgacaaact cgccgttcac ataaagttgg
    42001 gggatggtcg gccagtcgct gtattcttta ataccttggc gtacttcggg attttccaat
    42061 acgttgacgg taacgtaatc ggtgcagcct gccgcgttca ggatttgcac ggcgcgggaa
    42121 gagaaaccgc attgcggaaa ctgcttcgta cctttcataa acaatacgac gcggtgtgtc
    42181 gttactactt ctttaatttg gtcgtggatg gaagccatcg cttattcctt ttgataaagt
    42241 tgacaaaatt tgtcaggtag gacgcattat acgcaaaagc ggaaacttcc cacaatattt
    42301 gccgtatatc gcgcagtatc aatgttgtga acggaaatat tcccactcct cgacaatcct
    42361 gctgtccggc aaatggcaca gggcatatcc gccgccgctt tcgtcttttt ttacttcccg
    42421 tctgccgcct ttggcaatgc agaatttgga agcggaattt gccatgcctg tccgaaacgt
    42481 gttggcaggc agccggcagc agcgcggaca tgcatacgga tgaattgcct tcatggtttt
    42541 ccttatcgtc ggtacagggt cagacgaccc gcatatcggg tactttttta aacagccggt
    42601 aaaagttttc cgtcgtatat gccgcaacct gttccaatgt ttggttccgc aatttggcga
    42661 tatgttcggc ggtatagcgc acaaaagccg gttcgttctg cctgccgcgt ttgggaacgg
    42721 gggcgaggaa cggcgcatcg gtttccacca aaatgcggtc gtccggcaca tatttcgccg
    42781 cctcctgaac caagggggca tttttaaagg taacgattcc cgagaaagaa atataaagcc
    42841 ccaaatccat ggcagcccgg gcaaaggctg tgtcttcgga aaaacagtgg ataacgcccg
    42901 aattaacccg gcattctttc aggatagaca aggtgtccgc cgccgcatca cgcgtatgga
    42961 cgataacggg cagtccggtt tgattggctg cttcgatgtg gtctgcaaag cgtttgtgtt
    43021 gccaggacaa atcgcctttg caccagtaat aatccaagcc cgtctcgcca atgccgacca
    43081 ctttcggatg ggcggctgca gcaaccattt ccgcaataga aaattcttcg gcttccttgc
    43141 tgtcgggatg tacgcctatg gtgcaataga tgtgttcgtg cgcttcggcg atggcaaaga
    43201 cttcggagaa gctttcccta ctgacgctga tggcgagcac ctgccccacg ccgtttgctt
    43261 ccatgttgga caaaacttcg ggcaggcgtt ctttcaaacc ttcaaaattg aggtggcagt
    43321 gcgaatcgat gatatgcatg gcgttacatg gtaaacgtag gtctgctgcc gccgattgtg
    43381 ttgcccagtt cgacttcgat ctggtctttg actttcaggc agttttcgtg ttttgtgaat
    43441 gccagcccca cccctttggg tttggaggaa gtacgcgcag gattgatcca ggcgactttg
    43501 gtcggcagga acagtttggg gaagttgagg atttctacgg caagcagaat atcgtccccg
    43561 atggaaaata cgtcgttggt ctgcacaaac agaccgccgt gttccaaaaa cggcatatag
    43621 gagctgtaca gcagattcat gtctttcagc tgcaacgaca tcatttttgc cggaatattt
    43681 tgtccgtctg acataattca cccgttctct ttcttcaatt ccaaataatt gatgagcaga
    43741 tgctcgatct gcattttgac atttaaagta tgaaacccgt aaggggcaag ctgtttgagc
    43801 atatcctccg ccgcaaatac attgcgcggg cggaaaccgg atgccgtctg aagcagcctg
    43861 tcttcataag cgggataata gacgggtttc atgtgttgca ggcacaatcc caaatcgacc
    43921 agccatttct gcatccaccc gacaaatacg tcgagcggaa gtttctcctt atcgaaaagc
    43981 gcggcgtaat ccaaaatctt caacaacctt ggttctgcca aaatatccaa cagtttaatc
    44041 cgcaacgcac ggacaccgtc cgcctcatca aacagcggcg cacccgaatg gaacgccaaa
    44101 aattcttccg gctccgccac acccctgtcg cgcagatatg ccaatgcttc cccatgcgaa
    44161 ggagcgggca aaaccatctt ccggcagcga cttttaatgg tcggtaaaac cttgtccgcc
    44221 gcgtggctga ccagcaaaaa gaccacttgt ggcggcggtt cttccaacac tttcaacaaa
    44281 ctgttggcgg cttggacatt catactttcc gcaggatgaa tcagaatcac gcgcaaaccg
    44341 ccccgtaccg aagtcaggta cacattatcg atgatttccc tgacggcatc gattttgatc
    44401 tgcaacagtt tgcgtccgtt ttcgggttcg tccgacaagg gggtgatttc gtaaaaatcg
    44461 ggatggcttc cctgtccaaa cagatggcag gacatacatt cgccacaggg tttgcagccc
    44521 ggtgcagggg tttcgcacaa cagtgccttc gccgcaaagc gggcaaatgt agttttcccc
    44581 gtatcttttt tgccggcaaa cagccatgca ttgggacgac gctcccaatg ttccgcaatc
    44641 tgccgccatt gctcattatg ccacggataa atcatttcaa accatccgtc cggaaatcca
    44701 taccgccatc agagcagttc caaatcgggg ctggaacttt gcgcgcggcg gctgcgcaac
    44761 tgtaccgcca aacgcaaatc gtgtgcggaa tcggcatttt tcaatgcttc ttgcagggaa
    44821 atatcgcctt tttcatacaa ttggtaaagg tgttgatcga aggtctgcat acccagggta
    44881 gtggattttt tcatcacttc tttgatttca tggatgttgc cgttgtgaat caactccgaa
    44941 atcaggggcg aattgagcag cacctcgact gccgccaccc tgcccttgcc gccgtctcgc
    45001 ggaacgaggc gttgcgaaat aaacgcctga aggttgagcg acaaatccgt cagcaattgt
    45061 tcgcgccgct cctcggggaa aaagttgatg atgcggtcga gtgcctgatt ggtgctgttg
    45121 gcgtgcagcg tcgccataca caaatgcccc gtttcggcaa aggcaatggc gtagtccatc
    45181 gtttcgcggt cgcggatttc gccgataagg atgacatccg gcgcctgacg cagcgtgttt
    45241 ttcaacgccg ccatccagtt ttccgtatcc acgccgacct cgcgctgggt gatgatgcag
    45301 tttttgtgtt cgtggacaaa ctcgatcggg tcttcgatgg tgatgatatg tccgaacgaa
    45361 ttttcattgc ggtaatcgat aagcgaggca agcgaagtcg atttgcccga gccggtgccg
    45421 ccgacaaaaa taaccagccc gcgttttttc agcgcgacat ccttcaagac cggcggcagg
    45481 ttcaggcttt caaacttggg aatcttgctg gtaatcgcac ggaataccaa cgccgtcgcg
    45541 ccgcgctgta tcatcgcatt gacgcggaag cggctggtgt ccggcaggct gatggcgaag
    45601 ttgcactcgt tggtcgatga aaattcttcc gcctgcttcg cactcataat cgaaaaggcg
    45661 atttccatac atttttccgc cgtcagcggt tcgtccgtga tgcgggtgat tttgccgtcc
    45721 agcttcattg cgggcgggaa atgggtcgtc acaaacaggt cggaaccttt gtttttgttc
    45781 atatggcgca gccatgcgaa cagttcttcc tttgcggtca tattttcatc ggtaaacatc
    45841 ctcgtcccct aatcttcaaa caatctgtac cttcccattc taccaaaaac ccgccgtgcc
    45901 gtctgaaacc gtttcagacg gcacggacaa accacctcca ctcaatcctg ccgtgttagc
    45961 gtgtataatc aggcattcta tccgaaattc acaacaggtc agcaatatgt ctttgaaaac
    46021 agtagccgtt atcggcgcaa tggaacaaga aatcgagctt ttgcgcgaga tgatggaaaa
    46081 tgtcaaagcc gtctctttcg gcaagtttgc cgcctatgaa ggcgaattag cgggaaaacg
    46141 catggtgctt gcattaagcg gcatcggcaa ggtcaacgcg gcggttgcaa cggcttggct
    46201 tatccatcaa ttcgcaccgg actgcgttat caacaccggc agcgcgggcg gcttgggcaa
    46261 gggtttgaaa gtcggcgatg tcgtggtcgg cacagaaatc gcgcaccacg atgtcgatgt
    46321 aaccgcattc ggctatgttt ggggacaagt gccgcaactg cccgccgtat ttgtttcaga
    46381 cggcctcttg gtcggcaaag caaaacaggc ggcggaagtg tttgaaggcg cggcggtaga
    46441 acaaggcctg attgtcagcg gcgaccgctt cgtccacagc agcgaaggcg tggcggaaat
    46501 ccgcaagcac ttccccaaag tcaaagcagt ggaaatggaa gcggcggcga ttgcccaaac
    46561 ctgtcatcag ttggaaacgc ctttcgtcat catccgcgcg gtttccgatt cggcggacga
    46621 aaaggcagac atcagctttg acgaattttt gaaaacggcg gcggcaagtt ctgcaaaaat
    46681 ggtggcagaa atcgtcaaat ctttataaaa cctttatcaa atcatgccaa aacagcggtt
    46741 ttccgttaga atatcgggct atttccacgt tgcacccgat attcggacgc aacgccgttt
    46801 gttcagacgg catttcccaa acccactgtc cgacattcaa aacaactcta atgaaaaata
    46861 tccgaaattt ctccatcatt gcccacatcg accacggcaa atcgacgctt gccgaccgct
    46921 tcatccaata ttgcggcggt ttggatttgc gcgaaatgag tacgcaggta ctcgattcca
    46981 tggacatcga aaaagagcgc ggcattacca tcaaagcgca aaccgccgcg ctcaactata
    47041 aagcgcgcga cgggcaggtg tatcagctta atttgattga cacgccggga cacgtcgact
    47101 tctcttacga agtttcccgt tcgctgtcgg cttgcgaagg cgcgcttttg gtcgttgacg
    47161 cgtcgcaggg cgtggaagcg caaaccgtag cgaactgtta caccgcgatt gatttgggcg
    47221 tggaggttgt gcctgttttg aacaaaatcg acctgccagc cgccgacccc gaacgcgtgg
    47281 agcaggaaat tgaagacatc atcggcatcg atgcggtcgg cgcggtgcag tgttccgcca
    47341 aaagcggcat cggcgtggaa gacgttttgg aagaaatcgt tgccaaaatt cctgcgccga
    47401 ccggcgatga aaacgcgccg ctgcaagccg tgattgtcga ttcgtggttt gacaactacg
    47461 tcggcgtggt catgctgatt cgagtgaaaa acggcaccat caaactgaaa gacaaagtgc
    47521 gctttatgag caccaaggcg gaaacgcagg ttgagcagtt gggcgtattc acaccgaaat
    47581 cggttcaaaa acaagaactc aaagccggcg aagtgggctt tttgattacc ggcgtaaaag
    47641 aattgggtca ggcgaaagtc ggcgatacgg ttacactggt tgccaaccct gccactgagc
    47701 cgctgcccgg cttccaagaa gtacaaagcc aagtattcgc cggactttat cccgtggaaa
    47761 gccacgacta cgaagccttg cgcgacgctt tggaaaaatt gcagcttaac gacgcttcgt
    47821 tgaaattcga gcctgaagtt tcccaggcat tgggcttcgg cttccgttgc ggcttcttgg
    47881 gtctgttgca cttggaaatc gtgcaggaac gcttggagcg cgagttcgat atggatttga
    47941 ttaccaccgc gccgacggtg gtttacgaag tcgtgttgaa aagcggcgaa aaaatcgaag
    48001 ttgaaaaccc gtccaaactg cccgacatcg gcagcatcga aaccatactc gagccgatta
    48061 ttaccgcgac catccttgtg ccgcaggaat acgtcggcaa cgtcatgact ttgtgtaacc
    48121 aaaagcgcgg cgttcaggtc aatatgcagt acatgggccg ccaagtcatg ctgacttacg
    48181 atttgcccat gaacgaagtc gtcatggact tcttcgacaa actcaaatcc acttcgcgcg
    48241 gttatgcttc gttggactac catttcaaag agttccaacc gtctgatttg attaagctgg
    48301 atattatggt caacggcgaa aaagtcgatg cattaagcct gattgtgcac cgtcaaagcg
    48361 cggttcaccg aggccgcgag ctggcatcaa aaatgcgcga gctgattccg cgccaaatgt
    48421 tcgacatcgc cgtccaagcc gccatcggca gccagattat cgcccgcgaa aacgtcaaag
    48481 ccctgcgtaa aaacgttttg gcgaaatgtt acggcggcga tattacgcgt aagaaaaaac
    48541 tgcttgaaaa acaaaaggca ggtaaacgcc gtatgaaaca agtgggcaat gtggaaattc
    48601 cgcaaagcgc gttcttggcg attttgcagg tgagcgacaa ataactctgg cacacagggc
    48661 ggcgcgtcgg gaacacccct caaaccgccc tgatttcagg ggcacgcgcc cgcaaacaaa
    48721 ttttgcaatt tgccgcctta aaacggttgc acggacaggc gggtttttaa gcattaagga
    48781 acaacaatga acacaatgct aatgtcgggc gcggctgccg cgctgcttgc cggcatcatc
    48841 ctttatttca aaagcgacaa aaagcggcag gaaaacggtg aatggagttc cggtctggaa
    48901 tacgcctata tcctgacggc ggtcggcgtg tttgccgctt tgtccctgtt tatgagcttt
    48961 accgccgttt tcctgatttt cgttgtattg tgcggtacgg cttggggggt atacaaatac
    49021 cgcctgaaga ctcatcccga aatctcggaa agcagccact tcggcgatta tttcggcagt
    49081 ttcttcccta ccgttttggt attgttcctc atccggtcgt ttattgccga accgttccaa
    49141 atcccgtcca gctcgatgcg cccgggcctg attaagggcg atttcatttt ggtcggcaaa
    49201 ttttcctacg gcctgcgcgt acccgtttta aacaatatat ttattcctac aggcaaaatc
    49261 gaacggggcg atgtggtcgt ttttaattat cctttgcaac cggagatgac ctacatcaag
    49321 cgtattgtcg gcattccggg cgatgtggtc gaatatcgga ataaagtttt gacggtaaac
    49381 ggaaaacctg cttccgatat tcctgacggc acataccgtt atcccgacga caccgaccca
    49441 tccgaaatcc acaatacgga tatgttccac agcggtttgg acggcaaatc cttcaatatt
    49501 ctgaaaaaag aaggacagcc tgccgtttcc ctgcccgtat tgggcaaata tacctccgat
    49561 attatgtctg aaaacggata ttccatagag caaagcggtt tggaacactg ccaatatgcc
    49621 gacgacggca gcggtttcgt gtgcaaagtt cccgaaggac gctatttcgc tatgggcgac
    49681 aaccgcgaca acagtgccga ttcgcgctac tggggatttg tggatgacaa gctggttgtc
    49741 ggcaaggcaa tgttcatttt gatgaacttc ggcgatttcg gcagggccgg tacggcaatc
    49801 cgttaggccg gaaaattacg ccggaacatc aaaaatgcca tccgaaccct gtttcagacg
    49861 gcatttttat catcaaacgc cttgtttccc tgccggcagc ctcggggata atatagtgga
    49921 ttaaatttaa tccactatat ttccgtttgt gtggaaaccc atcccattga ataaagggca
    49981 tttcgtccga ctgacggtgt gggcggcata tggaaatacg gacattattt tagttgcatt
    50041 gccattccag cggaggcggc ttttttgatt ctgcccgccc cgatgccgtc tgaaagggct
    50101 tcagacggca ttttccgctc cgcgccgttg ctggcgtgtt tggtcttgcc ggttttgact
    50161 gcctgccagt tcaatcgtac gcaggtttgc cacggcagaa aatctgatgc cggacggagt
    50221 caaggctcgg actgctgttt cagcgaaccg aggtaaattg ccgaaagcgt cagcgccacc
    50281 cctgcccact gcacgccttc aatcggtttg cccaacccga aataatcgat gaacagggcg
    50341 gcaaccggtt cggacaaaag cagcagcccc gtcagcgaca gcgaaagcag cggaatcgca
    50401 taggcaacca tcgcccacgc gaagcactgc atcaccacgc cgtacacaag caccaaaccc
    50461 gcatctttcc aagtcgtcgg ataaagcgcg ccgccatcca tcagcaatgc cggaacaacc
    50521 agcgataccg cgccgcccaa actcaaaatc atcattgaag ggaaaagcgc caccgtctcg
    50581 atttcatggg ttttgcggac gaacaccatc gacagggcga gcatcagtcc cgataccaaa
    50641 ccgctgacga atccccaaac cgcattaccg ttgtagccga attccgcacc ggcaatcatc
    50701 gccacgccgg caactgccga tattaagcct gcctttttca gcccgctcaa acgctcgccg
    50761 aaaaagaaaa caccgattgc cgacaagaaa aagatttgca ggctgttgag cagggtggaa
    50821 atacccggcc cgaccgcgtg tatgctttcg tgccacaacg ccaaatcgaa agcgagaaac
    50881 acgcccgccg tcagggcata tcggacggtt ttcctgtttt ttgggaattt ttgcccgaaa
    50941 aaccgtgcta aaaaccaaaa tacgaacacc gaaatcagca accgccaaaa tgcgattgca
    51001 tacgaaccga cggggacgga tctgacaatc agactgccca gaccgaacac cacgcaaccc
    51061 agcaccagca atggtgcggc atattttttg ccgttaccga ccacaatatc ccctcccttc
    51121 cccatacggc tgccgcgccg acggcaagaa tgccgccatt ccgaaaatat gccgtctgaa
    51181 gcccaaagcc ccggctgcac ccggacaaac ggctgatttt acgggcaggc aggctatttt
    51241 ccgttggggc aaaaaaccgt cctgccggat aaaaccc
//
LOCUS       DAWITQ010000003        36793 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.003, whole genome shotgun sequence.
ACCESSION   DAWITQ010000003 DAWITQ010000000
VERSION     DAWITQ010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 36793)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36793)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36793
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.003"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(1..1184)
                     /locus_tag="WIX18_000149"
                     /pseudo
     CDS             complement(1..1184)
                     /locus_tag="WIX18_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271049.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
     gene            1330..2034
                     /locus_tag="WIX18_000150"
     CDS             1330..2034
                     /locus_tag="WIX18_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248833.1"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HEZ5237322.1"
                     /translation="MLRSILAASLLAVSFPAAAEALNYNIVEFSESAGVEVAQDTMSA
                     RFQVAAEGRDKNAVNAEFVKKFNSFNRKLKNGSFKTELVSRSAMPRYQYTNGRRIQTG
                     WEERAEFKVEGRDFDALNRFIADVQTDASLEYTDFSVSRERRNEVIDQVSKDAVLRFK
                     ARAEKLAGVLGASGYKIVKLNLGHIGSHIAGGGAAQAKMLRAMPMAASYGVEGTDSVA
                     PGVEEISISVNGTVQF"
     gene            complement(2099..2665)
                     /locus_tag="WIX18_000151"
     CDS             complement(2099..2665)
                     /locus_tag="WIX18_000151"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HEZ5237323.1"
                     /translation="MSIKSDKWIRRMSEEFGMIDPFEPNQIKEADGKRIISYGTSSYG
                     YDIRCANEFKIFTNINSTIVDPKNFDPKNFVTVEDDCCIIPPNSFALARTVEYFRIPR
                     NVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGVAQVLFF
                     ESDEVCETSYKDRNGKYMGQTGVTLPKA"
     gene            complement(2731..3146)
                     /locus_tag="WIX18_000152"
                     /pseudo
     CDS             complement(2731..3146)
                     /locus_tag="WIX18_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449185.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(3208..4107)
                     /gene="rdgC"
                     /locus_tag="WIX18_000153"
     CDS             complement(3208..4107)
                     /gene="rdgC"
                     /locus_tag="WIX18_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HEZ5237324.1"
                     /translation="MWFKQISFYPLNKEKLPEADILADKLAEAEFTHCQGLDWFSEGF
                     TAPVSFSPELVFPADFTLRVALKKEEKVLPAGVIRDILEEKVAEIQNNEARNVGRKEK
                     QELKEQITDDLLPRAFTRSSRTEAVFNTRHGYLLVNNAASAKAENILTKLREALGGLE
                     ASLPNTKQSPSSLMTGWLLQGHCEGGFELDSDCELKGTGDIVPVVKVSKQDLTADEVV
                     QHVKNGKTVTQLGLVWREQIAFILTQDFTLKRIQYLDVLQEEAESNGDDAAGLAFASQ
                     ILMAESVSTMLEELVSYLGGWQD"
     gene            complement(4138..5595)
                     /gene="der"
                     /locus_tag="WIX18_000154"
     CDS             complement(4138..5595)
                     /gene="der"
                     /locus_tag="WIX18_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEZ5237325.1"
                     /translation="MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGH
                     GKVGSKPYLVIDTGGFEPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKI
                     IADRLRQSPRPVYLAVNKGEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL
                     ETFPEPEAEEADAKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDF
                     EREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDA
                     TIAGFALEAGRALVVAVNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGI
                     DGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPV
                     IVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRIQYNVSENPYENAEDKPKKKPLR
                     RVSLSNRIEKREGRKEEKNRFKKKTKVSVKKQFSK"
     gene            complement(5749..6378)
                     /locus_tag="WIX18_000155"
     CDS             complement(5749..6378)
                     /locus_tag="WIX18_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfgM family protein"
                     /protein_id="HEZ5237326.1"
                     /translation="MAAHLEEQQELDNFKYFWKTTGKWLFALLILAALGYLGYTVYQN
                     RAASQNQEAAAILAEIVEKAQSKAPQSEINAELTKLQQSYPHSISAAQATLMAAATEF
                     DAQRYDVAEGHLKWVLSNQKDSLIQALAAQRLGVVLLQQKKYDAALAALDTPVEADFA
                     PLLMETKGDVYAAQGKSQEALKNYGQALEKMPQDSVGRELVQMKLDSLK"
     gene            complement(6379..7674)
                     /gene="hisS"
                     /locus_tag="WIX18_000156"
     CDS             complement(6379..7674)
                     /gene="hisS"
                     /locus_tag="WIX18_000156"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HEZ5237327.1"
                     /translation="MAQKIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVGRWTRTYG
                     YQQIRTPIVEQTGLFVRSIGEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVE
                     HNLLYNSPQKLWYMGPMFRRERPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLW
                     EKLGIREYLTLEINSLGNREERAAHRAALVEYLTRYEDKLDEDSKRRLKTNPLRVLDT
                     KNPDLQEICNAAPRLVDYLGEASQNHYARFKAMLDGLGIQYIENPRLVRGLDYYNQTV
                     FEWTTDKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAMGIERLLLLVGEYGSLEVNA
                     APDVYAMHQGEGADLQVMKYAQALRAQGFNVMQHSGYQSLKAQMKKADNSGARFALIV
                     AQDELANGTVTLKDMNGAHGQQTVAAEDLTNTLQQWKNA"
     gene            complement(7800..8342)
                     /locus_tag="WIX18_000157"
     CDS             complement(7800..8342)
                     /locus_tag="WIX18_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEZ5237328.1"
                     /translation="MQSWKERRDFNIVKQDLDFSCGAASVATLLNNFYGQTLTEEEVL
                     KKLDKEQMRASFEDMRRIMPDLGFEAKGYALSFEQLAQLKIPVIVYLKYRKDDHFSVL
                     RGIDGNTVLLADPSLGHVSMSRAQFLEAWQTREGNLAGKILAVVPKKAETISNKLFFT
                     HHPKRQTEFAVRQIRQARAE"
     gene            complement(9459..9659)
                     /locus_tag="WIX18_000158"
     CDS             complement(9459..9659)
                     /locus_tag="WIX18_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237329.1"
                     /translation="MQLICADWTGIGNFMKTFEKTWSAQYRDMEISVRNFWNLERTGA
                     EVYINGRRVYHNEAEMASASLR"
     gene            complement(9774..10193)
                     /locus_tag="WIX18_000159"
     CDS             complement(9774..10193)
                     /locus_tag="WIX18_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237330.1"
                     /translation="MSFGYLIATSQPCELLTKSRGETFSLIMDKMDLWIYFRFCEGNI
                     YTIRKNETESCLTERGGKWLKHIYEFNRGSFIFSYVLLKKRESEENFAEIVLKSIKNN
                     KILTVKVRSGLHFDLRNIYRIEMYSGLNLNQYGVASP"
     gene            complement(10251..10616)
                     /locus_tag="WIX18_000160"
     CDS             complement(10251..10616)
                     /locus_tag="WIX18_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237331.1"
                     /translation="MEKPLLTPPFFLFEDVSLDIFQGLSELEKKIEPQDLMDDAYRAF
                     DSVGNILNFRIVEKEQKGFWVSTKIKTVVFDSADMSSDDLFLKCLQSSYKAYFETEPA
                     GLDKRQLMKTLIQKCGFSC"
     gene            complement(10598..11146)
                     /locus_tag="WIX18_000161"
     CDS             complement(10598..11146)
                     /locus_tag="WIX18_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237332.1"
                     /translation="MKKQITAAMMILTMIAAPAMANSMDNQIFENQVFHTRADAPMQL
                     AELSQKEMKETEGAFLPLAILGGAAIGMWTQHGFSYATTGRPASVRDVAIAGGLGAIP
                     GGVGAAGKVVSFAKYGREIKIGNNMRIAPFGNRTGHPIGKFPHYHRRVTDNTGKTLPG
                     QGIGRHRPWESKSTDRSWKNRF"
     gene            complement(11309..11582)
                     /locus_tag="WIX18_000162"
                     /pseudo
     CDS             complement(11309..11582)
                     /locus_tag="WIX18_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220648.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(12144..12617)
                     /locus_tag="WIX18_000163"
     CDS             complement(12144..12617)
                     /locus_tag="WIX18_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237333.1"
                     /translation="MKKQITAAVMMLSMIAPAMANGLDNQTFENQVFHTQADAPMQLA
                     ELSQKEMKETEGAFLPIVAGALMGGAISAWANHGISKIKTGQFASTRSTLAATAGGMI
                     GGGYSSAMLRGAGITTSVFARSAWKGGNAIPNAVIRANGAALNQSSSAAMGKHRR"
     gene            complement(12660..13529)
                     /locus_tag="WIX18_000164"
     CDS             complement(12660..13529)
                     /locus_tag="WIX18_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="meta-pathway of phenol degradation family
                     protein"
                     /protein_id="HEZ5237334.1"
                     /translation="MKRIFLPALPAILPLSAYADLPLTIEDIMTDKGKWKLETSLTYL
                     NSENNRAELAALVYIQTGATSFIPIPTEIQENGSNTDMLVGTLGLRYGLTGNTDIYGS
                     GSYLWHEERKLDGNSKTRNKRMSDVSLGISHTFLKDDKNPALISFLESTVYEKSRNKA
                     SSGKSWLIGATTYKAIDPIVLSLTAAYRINGSKTLSDGIRYKSGNYLLLNPNISFAAN
                     DRISLTGGIQWLGKQPDRIDGKKESARNTSTYAHFGAGFGFTKTTALNASARFNVSGQ
                     SSSELKLGVQHTF"
     gene            13693..14616
                     /locus_tag="WIX18_000165"
     CDS             13693..14616
                     /locus_tag="WIX18_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEZ5237335.1"
                     /translation="MKKRNNPLPLLNGVKPSYLVLPHEKQFYGLPLLHFLCIRFPFVG
                     ADDWRRRLNSGFVVGSDGAALDEHTLFEPGKVMFYYRETSSEDEPRIPFEEKILHIDE
                     HLIVVDKPHFLPVIPSGRFLRETLLTRLRLRPELQHLNVEDITPLHRLDKDTAGVMLL
                     SHNPATRGAYQTMFQNKTVWKTYEALAPTRTDLPYPLDVVSRLVRGEKFFTTQEAEGE
                     PNAHTTVELIENRGEFSLYRLTPHTGKKHQLRVHMMGLGMPLLNDALYPVPSEAGSED
                     YRKPLKLLAKKIAFADPLSGRERVFCSGFCL"
     gene            complement(14694..15335)
                     /locus_tag="WIX18_000166"
     CDS             complement(14694..15335)
                     /locus_tag="WIX18_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEZ5237336.1"
                     /translation="MQKPETIHIPGPAGILETIHIPSEQVPARGVAVINHPNPLQGGT
                     NTNKVIQTAAKALSKLGFHCYLPNLRGVGGSEGTHDYGHGETQDCIAVIDYARAQHPE
                     APEFALSGFSFGGYVATFAAQARIPDLLLLIGAAVCHYTGRPEPSAVPNVAKTLMIHG
                     AEDEVVEIGKALKWAEPQDLPVITIAGSTHFFHGKLIVLRDTILRFAPVCLNG"
     gene            complement(15390..16181)
                     /locus_tag="WIX18_000167"
     CDS             complement(15390..16181)
                     /locus_tag="WIX18_000167"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HEZ5237337.1"
                     /translation="MARHPYRRLRPAKSSFPEVGISEEGNIRSLHLGSDTIQSSMNLD
                     HPSELVLSYSRAMMGWLLFTDALPQHITQIGLGGGSFARWIDTYLPDTRQTAVDINPQ
                     VIAIARSLFELPFEGEKFEIIEADGAEYIKVFRHNTDVILVDGFDGEQIIDALVEEPF
                     FRDCRNALSSDGIFVTNWWSGDKRYQRFIERLLSVFEGRVLELPAESHGNVAVMAFQS
                     SPKEQNIDKLKKRADKLSNAYGLDFHRMLADLKASNPNNGKHFHL"
     gene            16347..16422
                     /locus_tag="WIX18_000168"
     tRNA            16347..16422
                     /locus_tag="WIX18_000168"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:16380..16382,aa:Thr,seq:tgt)
     gene            16457..16532
                     /locus_tag="WIX18_000169"
     tRNA            16457..16532
                     /locus_tag="WIX18_000169"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:16490..16492,aa:Thr,seq:tgt)
     gene            16674..17465
                     /gene="panB"
                     /locus_tag="WIX18_000170"
     CDS             16674..17465
                     /gene="panB"
                     /locus_tag="WIX18_000170"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HEZ5237338.1"
                     /translation="MITVNTLQKMKAAGEKIAMLTAYESSFAALMDDAGVEMLLVGDS
                     LGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAAAEL
                     MAAGAHMVKLEGGVWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQA
                     LLNDAKAHDDAGAAVVLMECVLAELAKKVTETVSCPTIGIGAGVDCDGQVLVMHDMLG
                     IFPGKTAKFVKNFMQGHDSVQAAVRAYVAEVKAKTFPAAEHIFAD"
     gene            17588..18424
                     /locus_tag="WIX18_000171"
     CDS             17588..18424
                     /locus_tag="WIX18_000171"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HEZ5237339.1"
                     /translation="MQIIHTIRELRAWRKNAGKVAFVPTMGNLHEGHLALVREAKKRA
                     DSVVVSIFVNRLQFGQGEDFDKYPRTLQQDADKLEAEGVAVVFAPDEKELYPNVEQRY
                     NVEPPNLQNELCGKFRPGHFRGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTED
                     LNFDVEIVPVDTGRAEDGLALSSRNQYLSAAERDEAPRLYCELKAVAESLAQGSLDYA
                     GLERQAADHLTAAGWVVDYVEIRRADTLEVARAGDKKLVVLAAARLGTTRLIDNLEIK
                     LP"
     gene            18589..20433
                     /locus_tag="WIX18_000172"
     CDS             18589..20433
                     /locus_tag="WIX18_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237340.1"
                     /translation="MLPNRFKMLTVLTAALIAGQVSAAGSGAGDMKQPKEVGKVLRKH
                     QRYSEEEIKNERARLAAVGERVNQIFTLLGGETALQKGQAGTALATYMLMLERTKSPE
                     VAERALEMAVSLNAFEQAEMIYQKWRQIEPIPGKAQKRAGWLRNVLRERGNQHLDGLE
                     EVLAQADEGQNRRVFLLLAQAAVQQDGLAQKASKAVRRAALKYEHLPEAAVADVVFSV
                     QGREKEKAIGALQRLAKLDTEILPPTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQ
                     EMEIMNLVSLHRLDDAYARLNVLLERNPNADLYIQAAILAANRKEGASVIDGYAEKAY
                     GRGTEEQRSRAALTAAMIYADRRDYAKVRQWLKKVSAPEYLFDKGVLAAAAAVELDGG
                     RAALRQIGRVRKLPEQQGRYFTADNLSKIQMLALSKLPDKREALRGLDKIIEKPPAGS
                     NTELQAEALVQRSVVYDRLGKRKKMISDLERAFRLAPDNAQIMNNLGYSLLSDSKRLD
                     EGFALLQTAYQINPDDTAVNDSIGWAYYLKGDAESALPYLRYSFENDPEPEVAAHLGE
                     VLWALGERDQAVDVWTQAAHLTGDKKIWRETLKRHGIALPQPSRKPRK"
     gene            20573..21154
                     /locus_tag="WIX18_000173"
     CDS             20573..21154
                     /locus_tag="WIX18_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein LolB"
                     /protein_id="HEZ5237341.1"
                     /translation="MKHTVSASVILLLTACAQLPQNNENLWQPSEHISSFAAEGRLAV
                     KAEGKGSYANFDWTYQPPVETININTPLGSTLGQLCQDRDGALAVDGKGNVYQAESAE
                     ELSRQLVGFKLPIQYLHIWADGRRVAGAPYRILPDGILEQYGWTVGRTADSGGQVRTL
                     QLNNGNLNIRLVFTEIGMPSETETPERCAARTR"
     gene            21164..22009
                     /gene="ispE"
                     /locus_tag="WIX18_000174"
     CDS             21164..22009
                     /gene="ispE"
                     /locus_tag="WIX18_000174"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HEZ5237342.1"
                     /translation="MNIADGRQAFPAPAKLNLDLRITGRREDGYHNIESIFCLIDLQD
                     TVYLKPRDDGKIILHNPVDGMPQEVDLSYRAASLLQKYARNPAGVEIWLDKKIPTGAG
                     LGGGSSDAATVLLVLNRWWQCGLTQRQLIDSGAALGADVPFFIFGKNAFARGIGDRLD
                     EMDIPKQWYVIVKPPVHVSTAKIFTHESLTRNSASSIMPTFQNLQPFRNDMQAVVFKE
                     YPEVWKAYSELSRYGFALMTGSGACVFTACQDRNSAYNIYRQVSDLYEAYLAEGLSKH
                     PWLSV"
     gene            22017..22092
                     /locus_tag="WIX18_000175"
     tRNA            22017..22092
                     /locus_tag="WIX18_000175"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:22050..22052,aa:Gln,seq:ttg)
     gene            22105..22180
                     /locus_tag="WIX18_000176"
     tRNA            22105..22180
                     /locus_tag="WIX18_000176"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:22138..22140,aa:Gln,seq:ttg)
     gene            22189..22264
                     /locus_tag="WIX18_000177"
     tRNA            22189..22264
                     /locus_tag="WIX18_000177"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:22222..22224,aa:Gln,seq:ttg)
     gene            22431..23414
                     /locus_tag="WIX18_000178"
     CDS             22431..23414
                     /locus_tag="WIX18_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEZ5237343.1"
                     /translation="MAAYDSLMVFTGNANPELAQRVVRHLDISLGNASVSKFSDGEVA
                     VELLENVRGRDVFILQPTCAPTNDNLMEILTMADALKRASAGRITTAIPYFGYARQDR
                     RPRSVRVPISAKLVANMLYSAGIDRVLTVDLHADQIQGFFDIPVDNIYATPILLNDIK
                     QQRIENLTVVSPDIGGVVRARAVAKSLNADLAIIDKRRPKANVAEVMNIIGDIQGRTC
                     LIVDDMIDTANTLCKAAVALKERGAERVLAYASHAVFSGEAVSRIASSEIDQVVVTDT
                     IPLSEAAKNCDRIRQVTIAGLLAETVRRISNEESVSYLFNEEVMTGSMLLP"
     gene            23481..24053
                     /locus_tag="WIX18_000179"
     CDS             23481..24053
                     /locus_tag="WIX18_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HEZ5237344.1"
                     /translation="MTYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVD
                     HKTVFYALEKESFHTALIKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVR
                     IRVPLHIVNAENSQAVKLQGGRVSLLNTSVEVVALPANIPAFLDLDCAEVVAGDILHL
                     SDIKLPEGVESVSLKRNENLAVATVTGKKR"
     gene            complement(24495..24713)
                     /locus_tag="WIX18_000180"
     CDS             complement(24495..24713)
                     /locus_tag="WIX18_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237345.1"
                     /translation="MRAVEICGFFFAGDEGAGSGALQVEIGGGFARPIELITFARTGK
                     VFCAEDEFELFKVNLVFTKDFGKELFEF"
     gene            24786..26345
                     /locus_tag="WIX18_000181"
     CDS             24786..26345
                     /locus_tag="WIX18_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEZ5237346.1"
                     /translation="MIYIDPPYNTGNDSFVYPDKFSESREEYARRVGDTDDAGYLKRD
                     GVFQGAWRKNGKDSGHYHSNWLSMMLPRLHLAKTLLREDGVIFISIDDNEQAQLKLLC
                     DEVFGAENFVGQFPWRKRTAKSDVPFGVSADYEYLLAYARSNAFIASIDAEERRYFET
                     DDFPNRPWRTHDLTTQRNASERPNSFFTMVNPKTGKEYPANPNATWRVTKDTFQEYYN
                     AGKIVFPDDYDFLKIKNPVMRYFKDDDMKKDGERFGRKAVSTRLPENVGMSLNGTKEI
                     TELFKSKLFDFPKPSSLIKYLLQILHVSDGLILDFFSGSGTTAHAVMQLNAEDGGCRR
                     FICVQLPEETDEKSEARKAGFNTIAEIAKERIRRAGRQISDGLQEGAEIDTGFKVFKL
                     AESGFKQWRQPEQSDTEALQRELSLNIDSVLSETSSENLLYELMLRMGLKLTCKVSFL
                     DDVYFVEDEDTGGLYAFLLKRVDQGLIDAVLAKHPAKVAALDRLFEGDDALKSNTVLQ
                     MKDAGVMFECV"
     gene            26580..29231
                     /locus_tag="WIX18_000182"
     CDS             26580..29231
                     /locus_tag="WIX18_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HEZ5237347.1"
                     /translation="MELKFEELPYQLDAVNAVANLFAGQPNHARTFDLTSQGTGRFVG
                     NGLDLDWETLGLNLNTVQKQNGQPETEIGAHGLNFSLEMETGTGKTYVYLRTIYELNR
                     SYGWKKFVIVVPSVPIREGVLKSLEITKAHFDGVFGRPVMRYAEYSSSRLSDLRTFAV
                     NDHIEILVINIQSFEKDGNVINKVNESGETPIKFIQETCPIVIIDEPQNMETEGRLNA
                     LESLNPLFTLRYSATHKQPYHKVYSLNPVQAYNLKLVKQIEVLPVLAENDVNGAFVEL
                     LEVKQAAKGRPKADLNIHYQDKKETKKKKVSVKWEDDLFEKSGGNEAYRHGFIIDGMD
                     FDKQELAFSSGKTITRGGDGDAVRDEIMKNQIRETVREHLAKEKRLNPLGIKVLSLFF
                     IDRVENYRTEDGTAGKFALWFEEIYRELAGNTDTAGVHDGYFSQDRKGRLKNTDGTTQ
                     ADNDTYRLIMRDKETLLSFDSPLRFIFSHSALKEGWDNPNVFQICTLNETRSPLKKRQ
                     EIGRGLRIAVNQEGRRVRDENVNILTVVPNESYELFAANLQKEYEDECGIKFAAENIK
                     NGNKKKKQLFRKDFPLDPEFQAIWDKLKYKTRYRVRFDTEELIKQASEAVANLPEIQK
                     PKIRIRKAQLKQSQTYGIETVEIAGRSREMDVQWEIPDILGEIQRKTGLTRRTVYEII
                     IQSGRLKDVAGNPQRFIDLTAEAVNRSLHALMAAGIEYERTGEVYDQKLLEDMAREGI
                     EFYENGFTFTVSNPQKTICENYIPLDSGTEKAFAQNCEDYDAKNEGGVAFYFKLPGWF
                     KIPTPLGNYNPDWAVVKQVRDKVYFVAETKNTGKGIQTGVDMDKLRQNERLKIKCGKR
                     HFEALGGLAYRVVEKVGDLKSEKEEQA"
     gene            complement(29393..30562)
                     /locus_tag="WIX18_000183"
     CDS             complement(29393..30562)
                     /locus_tag="WIX18_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HEZ5237348.1"
                     /translation="MTAHKILPVLLSIILGVSHATAASPAPNKPAVHAAPTFQTPETL
                     TAAHIVIDLQSKQILSAKNINTPVEPAALTQLMTAYLVFKNMKSGNIRSEENLKIPES
                     AWASEGSRMFVRPGDTVSTDKLLKGMIALSANDAALTLVGRLGNGSIENFVQQMNKEA
                     RRLGMKNTVFKNPTGLSREGQVSTAKDLALLSEALMRDFPEYYPLFSIKSFKFKNIEQ
                     NNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESAETRASDNSK
                     LLNRALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAKTTEQIL
                     ETIQPIPAPVKKGQILGKIKIRQNGYTLAEKEIVALENVEKRSRWQRLWTRLTGQ"
     gene            30710..32236
                     /gene="ilvA"
                     /locus_tag="WIX18_000184"
     CDS             30710..32236
                     /gene="ilvA"
                     /locus_tag="WIX18_000184"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HEZ5237349.1"
                     /translation="MNTPLPYSNYLIRILTASVYDVAVETPLEPARSLSVRLKNNILL
                     KREDLQPVFSFKIRGAYNKMSKLPKDALACGVIAASAGNHAQGVALSAQRLGCRAVIV
                     MPETTPKIKVDAVKSRGGEVVLRGVSYNDAYDYAMELAEKEGLTYIAPFDDPDVIAGQ
                     GTVGMEIVSQHPDPIRAVFVPIGGGGLAAGVAAFIKQVRPEIKVIGVQTNDSCCMKQS
                     VEAGEIVHLKDVGLFSDGTAVKVVGNETFRLCKELLDEIITVDTDAVCGAVKDIFDDT
                     RSITEPAGALALAGLKAYIAREGAENQTLIAVTSGANMNFHRLRHVSERSELGEGNEG
                     IFAVTIPEERGSFLKFVNILGNRNITEFNYRYGDDEKAHIFVGLQAAGPQDLAVIGSR
                     LDEAGLPNVDLTDDEIAKIHIRYMVGGRTDKVENERLVSFEFPERPGALARFLNHMQG
                     GWNITLFHYRNHGADYGRILVGIDVPPHDAAAFDGFLESLGYSYHEETQNAAYKLFLA
                     "
     gene            complement(32293..33366)
                     /locus_tag="WIX18_000185"
     CDS             complement(32293..33366)
                     /locus_tag="WIX18_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HEZ5237350.1"
                     /translation="MSITIQNLNKHFGNFHALKNINLNVPTGKLVSLLGPSGCGKTTL
                     LRIIAGLENADGGKILFDGQDVTAKHVRERKVGFVFQHYALFRHMNVFDNVAFGLTVL
                     PKSERPSKGQIRAKVEELLKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLL
                     DEPFGALDAKVRKELRTWLRDIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQT
                     GSAEAIYRKPENAFVTEFLGETDAFEGRIEKGFWHYNGFAWKLDAQYKWQEQTATGYI
                     RPHEWQIAAEHETPMICAEIEKVHAVGALTHILVKHGKQDVHITLAGSDAARYPIAEG
                     KELKLIPKQVYVFSQNELIEYSI"
     gene            complement(33363..34223)
                     /gene="cysW"
                     /locus_tag="WIX18_000186"
     CDS             complement(33363..34223)
                     /gene="cysW"
                     /locus_tag="WIX18_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysW"
                     /protein_id="HEZ5237351.1"
                     /translation="MKPYSANPNLTEPRRLRVLLIAAALGFLLLMLVVPLVAVFYEAL
                     KGGWDLYLKSLNDPEAWSAIKLTLITALIVVPVNAVLGVAMAWLLTRFDFRGKQLLTT
                     LLDLPFSVSPVVAGLMFVLLFGAHTALGGRLEAQGIQIIFAIPGIVLATLFVTFPFVA
                     REIIPLMQAQGDSEEQAALILGASGWQMFWRVTLPNIKWALLYGIILTNARAMGEFGA
                     VSVVSGHIRGETNTVPLLVEIFYNEYNFTGAFALSGVLALLALATLAVQNIITKLQDK
                     KLAAAERNAV"
     gene            complement(34475..35311)
                     /gene="cysT"
                     /locus_tag="WIX18_000187"
     CDS             complement(34475..35311)
                     /gene="cysT"
                     /locus_tag="WIX18_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysT"
                     /protein_id="HEZ5237352.1"
                     /translation="MLPLKTPGVLPGFKLSLGLTVLCLSLLVVLPFAMMAAKAAEIGW
                     GGFWNTIAEPNVLAAVWLSLRMSFYAMLTNVVFGTLVAWVLVRYEFPGKGLANALVDL
                     PFALPTAVTGIALATLYAPNGWIGRFFEPLGIKIAFTPVGIWIALVVVSLPFIVRAVQ
                     PVLEELSGEYEEAAATLGANRFTTFRRVLLPEITPALLTGAGMMFARATGEYGSVIFI
                     AGNIPMVSEILPLIITGKLEQFDVQGASAVALFMLLVSFVILFALNVMLWALGRRSGA
                     KG"
     gene            35450..35557
                     /locus_tag="WIX18_000188"
                     /pseudo
     CDS             35450..35557
                     /locus_tag="WIX18_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            35602..35934
                     /locus_tag="WIX18_000189"
     CDS             35602..35934
                     /locus_tag="WIX18_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general secretion pathway protein GspG"
                     /protein_id="HEZ5237353.1"
                     /translation="MQILSFQPDIAERMLEGTEGESVNENAQFVRTDNGYWIAWHEGV
                     AALLAPDTPPGIPCFWVEGAESLEELCVMVERGEFDEVEEFDGDDDEWLETAQGCGHH
                     GEACACGH"
     gene            36265..36774
                     /locus_tag="WIX18_000190"
     CDS             36265..36774
                     /locus_tag="WIX18_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003662333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxyl methyltransferase
                     family protein"
                     /protein_id="HEZ5237354.1"
                     /translation="MTMILSILSLFFIIRLLFLAVSIKHEKALIAKGAKQYGKTNSTL
                     LAAVHTLYYLACFVWVWLSDTAFNGISLIGTLTVMASFVILSLIIKQLGEIWTVKIYI
                     LPNHQINRSWLFKTFRHPNYFLNIIPELIGIALLCQAWYVLLIGLPIYLLVLFKRIRQ
                     EEQAMATLF"
BASE COUNT         9124 a         8610 c         9715 g         9344 t
ORIGIN      
        1 ccggtatttt cttaccgtat tctgcgattg cctgtcggaa aatgccgatc aacctgccta
       61 taacggcatt ttcgccaaat tcgttcagac agttttccct aagtcgggca ggttcaaaat
      121 cagagtggtg ttcatacatt ttgatgagtg cgtcggcaag ggcatcgtcg tcgtcaacag
      181 gaaccaaata tccgttgccg tctgaaacaa tagattccgc accgccgcag cgtgttgcaa
      241 tgacgggcaa tccttgggac agtgcttcga tatagaccac gccgaaggtt tcggtgcggc
      301 tggcaaggac gaatgcgtcg ctgttcctca tcaaatccaa gactgcttcg ggctgcaatg
      361 cgcccaaaaa tgtaacggca tgggtaatgc ccaagtctgc cgcctgctgt ttcagccgct
      421 gttcttcctg tccgctgccg ccgatgttta gacgcagttg cgggcattgt gccaacgccc
      481 gggcaaaggc agtgagcagg acatcgtgtc ctttgagacg gcgaaggtgc gagacggtgc
      541 agaacacgaa atgcggtttg ttgttttttt ctctttgttc aaacggtcgg ttgaatattc
      601 cgcccagtat gttggggagg tactgccatt cgcagccgta tttgtgttgc aggacgtgtg
      661 cgaaatggcg gctgatggcg agacgtgcgg cggcgtgcgc cgccgcattt ttcataggct
      721 gccattggtg gggacggatc agaccgcgcg tgatggtgct gctgtgtttc gtgacgacat
      781 aggggatgcc gtatttttgg gaaatcttga aggcaagtat gccggcatag ttcatacagt
      841 gggcgtgaat caggtcgggc agcccgtttt cgcggatgta gtgtttgaaa gctttcaaac
      901 ccgcacacac ccagcggatg cagtcgatgt cgatgaacgg aaagcggggg aagaaatata
      961 tgccgtgcca tgcatagatg tccaaaccgc tttgccgata ttttgcaaaa ccgtaaggcc
     1021 ggtcaggatg cttgctgttt ctttccgcaa gtagcggaac atcggtgcaa gcacggcggt
     1081 tttgatgcct ttcctctgca atgccagtgc ctgattttga aaaaaatccc gtccacatcc
     1141 tgttcggatt gcggatacca tgaggggatg acgaggacgt gcaacggttc ggacataata
     1201 tgattccgta tcggaaagac ggttattata agacagacgc agaccgaata tttaaattgt
     1261 tgccttacgc taatgcaatt tagcgcgccg atatgctaga ttggcggttt tatgagtgag
     1321 gatacggata tgttgcgttc tattttggcg gcttccctat tggcggtatc ttttccggca
     1381 gcggctgaag cattgaatta caatattgtc gaattttccg aatcggcggg tgtcgaggtg
     1441 gctcaggata caatgtccgc acgtttccaa gtggcggcgg aaggacggga caaaaatgcc
     1501 gtcaatgccg agtttgttaa aaaattcaac agttttaaca gaaaattgaa aaacggcagc
     1561 tttaaaaccg aattggtatc gcgcagtgcg atgccgcgct atcaatatac caacggcaga
     1621 cgcattcaaa caggctggga ggagcgtgcg gaatttaagg tcgaaggtag ggattttgat
     1681 gcgttgaacc gttttattgc tgatgttcag acggatgctt cgcttgaata taccgatttc
     1741 agcgtgtcgc gtgaacgccg caacgaggtc atcgatcagg tcagcaagga tgccgttttg
     1801 cgtttcaagg cgcgtgccga aaagttggcg ggcgttttgg gtgcgtccgg ttataaaatc
     1861 gtcaaattga atttgggaca cattggcagc catatcgcgg gtgggggagc tgctcaggca
     1921 aaaatgcttc gtgccatgcc gatggcggca agttacggcg tggagggtac ggattccgtt
     1981 gcacctggtg tggaggaaat cagcatcagc gtcaatggga cggttcagtt ctgatttgag
     2041 gtgaacggta aatgccgtct gaaacccgac gataagggtt cagacggcat tttgtgtttc
     2101 aggctttggg cagggttacg ccggtttgtc ccatgtattt gccgttgcgg tctttgtatg
     2161 aagtttcgca cacttcgtcg ctctcgaaaa acaggacttg cgccacgcct tcgccggcgt
     2221 agattttggc gggcaggggg gtggtgttgg aaaattcgag ggtaacgtag ccttcccatt
     2281 ccggttcgaa cggggtaacg ttgacgatga tgccgcagcg tgcgtaggtc gatttgccca
     2341 agcagacggt caggacgttg cgcgggatgc ggaaatattc gaccgtgcgc gccagtgcga
     2401 aggaattggg cgggatgatg cagcagtcgt cttcaacggt aacgaagttt tttgggtcga
     2461 agtttttggg atcgacgatg gtgctgttga tgttggtgaa gattttaaat tcgtttgcgc
     2521 agcggatgtc gtagccgtag ctggacgtac cgtaggagat gatgcgtttg ccgtcggctt
     2581 ctttgatttg gttcggctcg aaggggtcga tcatgccgaa ttcttcgctc atgcggcgta
     2641 tccatttgtc ggacttgatg ctcataatgt tttccttgtt tcttgcagtg ttcggacaaa
     2701 gcattggggg atgccgtctg aaaacggggc ttatttgttt ttaggcagtt tcacttcttt
     2761 aatcatgccg ttttcgcatt tcataatgaa gagggtttcg ccgttttgcg agacggtaaa
     2821 tctgccgtgt gccaagcctt ttttgaacgt gcccgagagt accatgttgc ggaatttggt
     2881 actgtcggaa ttgaacggtt cgataaatat ttcgcggttg gcggcaacgg tataaacgcc
     2941 ttgtccgtcg aatttgccat ttttaaacga accggtatag ttgcgcccgt cttggcagcg
     3001 catgtgcctt tgcctgaagg aagcccgtct tttccgactc cgccttcgta ggtgcagccg
     3061 ggttcttgat aggaagtcag aacggcggcc gaagtgggga gggcgaacat catggcgggc
     3121 agtaggaatg cgagatgttt aagcataagg gttattccat tggattttgg ttgacggtat
     3181 tttgtcgtga aaaagccgtc tgaaaaatca atcttgccag ccgcccaaat aggaaaccag
     3241 ttcttccaac atggtgctga cggattccgc catcagaatt tgcgaggcga aggcaaggcc
     3301 ggcggcatcg tcgccgttgc tttcggcttc ttcctgcaat acgtcgaggt attggatgcg
     3361 cttgagtgtg aagtcttgag tgaggataaa ggcaatttgt tcgcgccaca ccaagcccag
     3421 ttgggtaacg gttttaccgt ttttgacgtg ttgaaccact tcgtcggcgg ttaaatcttg
     3481 tttggatact ttgacgacgg gaacaatatc gcccgtacct ttgagttcgc aatcgctgtc
     3541 taattcaaaa ccgccttcgc aatgcccttg caacagccag ccggtcatca aggaagaggg
     3601 cgattgcttg gtattcggca gcgaggcttc caaaccgccc aaagcttcgc gcagcttggt
     3661 caggatgttt tctgctttgg cggaagccgc gttattgacg agcaggtagc cgtggcgggt
     3721 gttaaacacc gcttctgtac ggctgctgcg ggtaaacgct cggggcagca ggtcgtctgt
     3781 aatttgctct ttaagctctt gtttttcttt gcgaccgaca ttgcgggctt cattgttttg
     3841 gatttccgct accttctctt ccaaaatatc gcggatgacg ccggcaggca ggactttttc
     3901 ttcttttttc agggcgacgc gcaaggtaaa gtcggcaggg aaaacgagtt caggggagaa
     3961 tgaaaccggt gcggtaaagc cttcgctgaa ccagtctaag ccttggcaat gggtaaattc
     4021 agcttcagca agtttgtcgg caagtatgtc cgcctcaggc agcttttctt tgttgagcgg
     4081 ataaaaacta atctgcttga accacataat gtttcctatt gtttgaaatg tcgggaatta
     4141 tttgctgaat tgttttttca cactgacttt ggttttcttc ttgaagcggt ttttctcttc
     4201 tttgcggcct tcgcgtttct caatacggtt gctcaggctg acgcggcgca gcggtttttt
     4261 cttcggtttg tcttccgcat tttcatacgg gttttccgaa acattgtatt gaatccgcaa
     4321 cggcgtgcct tgcaggttga aggctttgcg gaacgtttgg gtcagatagc gcgtatagct
     4381 gtcggaaatc gcgtgcagcg aattgccgtg taccacaatt acgggagggt tcatgccgcc
     4441 ttggtgggca taacgcattt tcggacgcac caagccggca cgcggcggtt gctgacgctc
     4501 gatcgcgctt tgtaatacgc gcgtgatttt cggcgtcggc atcttaatca tcgccgcgtt
     4561 gtaggcagcc tgaatgctgt caaacaaacc gtctataccg cgctctttca atgcggaaat
     4621 aaagtggaac ttggcaaaat cgaggaaata cagtttgcgg ttgatatcgc gtttcacttg
     4681 ctcgcgacgc tcttcgctga tgccgtccca tttgttgacg gcaaccacca aggcgcggcc
     4741 tgcttccaaa gcaaaaccgg caatcgtcgc atcttggtcg gcgatgtcct gctgcgcgtc
     4801 caataccaaa acagcgacgt ttgccgcttc aaccgcctgc atcgctttga taacggagaa
     4861 tttttctact gcttcatcca ctttgccgcg acggcgcacg cctgcggtat cgatgatggt
     4921 aaacggtttg ccttcgcgtt cgaaatcgat gtggatgctg tcgcgtgtcg tgcctgccat
     4981 atcgaaagca atcacgcgct cttcgccgag gatggcgtta accagtgtgg atttgccgac
     5041 gttcggacgg ccgatgacgg caaagacggg atgttttgca tcggcttctt cggcttccgg
     5101 ctctgggaag gtttccaaaa tatcttcaat cagataatac acgccatcgc cgtgcgcacc
     5161 tgaaataaca taagggtcgc ccaaagcaag ttcgtagaac tcggcggcaa gcacggccct
     5221 gttgccgcct tcgcctttgt ttaccgccag ataaacaggg cgcgggcttt ggcgcaggcg
     5281 gtcggcaatg attttgtctt gcggggtcag gccggtacgg ccgtccacca aaaacacaac
     5341 cgcatcggct tcatcgacag cctgcaaggt ttgttttgcc atttcgtgca aaatgccgct
     5401 gtccacaacc ggctcgaaac cgccggtatc gatgaccaaa taaggtttgc tgccgacttt
     5461 gccgtgtccg taatggcggt cgcgcgtcag gccgggcagg tcatgcacga gcgcgtcttt
     5521 ggtgcgcgtc aaacggttga ataaagtaga tttgccgacg ttggggcggc cgacaagcgc
     5581 gatggttggt ttcatgattg agtctttctg tgtcaagtgc cgttcgggag aactgaacac
     5641 gagcaggtgt ccgttggaca cggtaaatag gttcttcacg gcaagaggcc ataaagaggg
     5701 agggtaaaat gccgtctgat aaataatgga cggcatttca gacggcattt atttcagcga
     5761 atcaagtttc atttgaacca attcgcgacc gacagaatct tgaggcattt tttctaaagc
     5821 ctgtccgtag ttttttaagg cttcctggct ttttccctgt gcggcataga catcgccttt
     5881 ggtttccatc agcagggggg cgaagtccgc ttcaaccggc gtgtcgagcg cggcaagtgc
     5941 ggcatcgtat tttttttgtt gcaacaacac aacgcccaga cgctgcgccg ccaacgcttg
     6001 aatcaggctg tctttttggt tggacaacac ccatttcaaa tggccttcgg caacatcgta
     6061 acgctgtgcg tcaaattcgg ttgccgccgc catcagcgtg gcttgggcgg cggaaatgga
     6121 atgcgggtag ctttgttgga gtttggtcaa ttcggcattg atttcgcttt gcggggcttt
     6181 gctttgcgcc ttttctacga tttctgccaa tatggcagcg gcttcctgat tttgggaagc
     6241 cgcacggttt tggtaaaccg tgtatcccaa gtagccgagt gctgccaaaa tcagcagggc
     6301 aaacagccat ttgcccgtgg ttttccaaaa atatttaaag ttgtccaact cttgttgttc
     6361 ttccaaatgg gctgccattt atgcgttctt ccattgttgt aaagtgtttg tcaaatcctc
     6421 ggcggcgaca gtttgctgac cgtgtgcgcc gttcatgtct ttgagcgtaa ccgtaccgtt
     6481 cgccagttcg tcttgcgcga caatcagggc aaagcgcgcg ccgctgttgt cggctttttt
     6541 catttgtgct ttcaggcttt gatagccgga atgctgcatt acattgaaac cttgcgcgcg
     6601 caaggcttgc gcgtatttca tcacctgcaa gtccgcccct tcgccttggt gcattgcata
     6661 gacatcaggc gcggcgttta cttccagcga gccgtattcg cccaccaaaa gcagcagccg
     6721 ttcgatgccc attgcaaagc cgatggacgg cgcaggctta ccgccaagtt cctcaatcaa
     6781 accatcgtaa cggccgccgc cgcacacagt cgcctgcgcg ccgagtttgt cggtcgtcca
     6841 ctcaaaaacc gtctgattgt aataatccaa accgcgaacc aagcgcggat tttcaatata
     6901 ttgaataccc aaaccatcca acatcgcctt gaagcgtgca tagtggtttt gcgaagcctc
     6961 gcccaagtaa tccaccaaac gcggcgcggc attgcagatt tcctgcaaat cagggttttt
     7021 cgtatctaaa acgcgcaaag gattggtttt cagacggcgt ttgctgtctt catccaattt
     7081 atcttcataa cgggtcagat attcaaccaa cgccgcacgg tgtgccgcgc gttcctcacg
     7141 gttgcccaag ctgttgattt ccaaagtcag gtattcgcgg atacccaatt tttcccataa
     7201 gtcggcagac atcgcgataa tttccgcatc gatatccggc ccttcaaaac ccaaagcctc
     7261 gataccgacc tgatggaact gacgataacg gcctttttgc ggacgctcgc ggcggaacat
     7321 cggccccata taccacagct tttgcgggct gttgtacaga aggttgtgtt cgaccaccgc
     7381 acgcagacaa gaagccgtac cttcgggacg caggctcaaa ctcaaagaat cgtttgaatc
     7441 ggaaaaggtg tacatttcct tgccgaccac atcggtttcc tccccgatgg agcggacaaa
     7501 caaaccggtt tgctcgacaa tcggcgtacg gatttgctga taaccgtaag tgcgtgtcca
     7561 gcggccgacc gtatcttcaa acgcctgcca aaacgcagcc gtcagtttga aatctttttg
     7621 ctcgacaggc agaaggtcgt tcatgccttt gacggattgg attttttgtg ccatttcaag
     7681 taagaatgct taaatcaaat tgcgggcgat tatagcggat ttttaagggt ttgtgaggtt
     7741 gggggtggtt tgcggacggg taaaatgccg tctgaaacag ttttcagacg gcatttgact
     7801 tactctgcac gtgcttgcct gatttgtcgg actgcaaact ctgtctgccg cttgggatga
     7861 tgtgtgaaaa acaatttatt tgaaattgtc tcggcttttt tcggcacgac cgccaaaatc
     7921 ttacctgcca aatttccctc acgggtttgc caagcctcca aaaactgcgc cctgctcatc
     7981 gaaacatgac ccagcgacgg gtcggcaagc aaaaccgtat tgccgtctat gccgcgcaat
     8041 accgagaaat gatcatcctt gcggtatttc agatacacga tgacggggat tttcaactgc
     8101 gcgagctgct cgaaagacag ggcatagcct ttcgcttcaa aacccaaatc gggcataatg
     8161 cgccgcatat cctcaaacga cgcgcgcatc tgctccttat ccagcttttt caacacttct
     8221 tcttccgtca gcgtttgccc gtaaaaattg ttcaaaagcg tcgccaccga agccgccccg
     8281 caggaaaaat ccaaatcctg ctttacaata ttgaaatcgc gcctctcttt ccaactctgc
     8341 actttgattt ttccgtaaac aacaggatta tcgttaaaca tcggcgcagc attcaaacga
     8401 taagataaag aaacggcaac acacgccaac agaaaaacat atttgaactt catcatattg
     8461 tccacataaa gggcagcctg aaaatctttc aggctgccct tgtcaaatta ttcctagctt
     8521 tcggcttttt tggcaaacca aacaatccga ttacccgcat aatactttcc atttattgaa
     8581 atccaacaag ccgcgtccaa aaaatgccat gcactgccga tttccgcagt aatctttgta
     8641 tcgttttctt caaattccaa atattcaccc aataataaac ttgaaacaga acgcgtgggc
     8701 agcaagtgcc caccctacgc ctattcaaat aatttgatta aataaagaat aaagaaaatg
     8761 catcaggaac aaaattataa tctgccacct gactcacacc gcttttaaag taaggggcat
     8821 caaaatcaaa accgcaaaaa ataatttttg cattgatttt taatagattt aaaattcgaa
     8881 tatagtgttt ctccagattt aaaaagttta tctttatcta tatatttgat gctttcccta
     8941 tccaaaataa atatttcaaa cattaaaaaa tcattacatg accaagccaa atcataaatt
     9001 tgattcaaat gggtatcata aagataaaaa taataaggtt tgggaacagg taaaatattt
     9061 aatggaaaag gaggactaat tttcttaata tctgatgact gatatccata tctttctata
     9121 ttcttaaaaa tttcatcttt cttaagataa caagacattc tgaagataac aagacattct
     9181 gacaatcaca acctgttcat cggatatatt atctatttgc atggcgcgta taacacgcca
     9241 tgcctgatta aaattaggct cccttacctt agaatctatt atcttttcca aagatgaaaa
     9301 tgccccttat cttgaactct ccagttagaa cctggaagtt tcgtacctct taaatgtgta
     9361 ttaatatttc ttatagtttc attaaaatgc cacgcgctgc cgatttcaac ggtaattttc
     9421 gtaccgcttt cttcaaattc caggtattcc cccattagct aacgcaaaga agcagacgcc
     9481 atttcggctt cgttatgata aacccgcctt ccgttgatat agacttccgc ccctgtccgc
     9541 tccaaattcc aaaaattccg tactgaaatt tccatatccc gatattgtgc agaccatgtt
     9601 ttttcgaagg ttttcataaa atttcctata cctgtccaat cggcacatat caattgcatt
     9661 attatagtgg attaacaaaa atcaggacaa ggcgacgaag ccgcagacag tacagatagt
     9721 acggaaccga ttcatttggt gcttgagcac cttagagaat cgttctcttt gagctaaggc
     9781 gaggcaacgc cgtactggtt taaatttaat ccgctataca tctcaatacg ataaatattt
     9841 cttaagtcaa aatgcaagcc tgaccgtacc ttaactgtca aaattttatt attttttatt
     9901 gattttaaaa caatttctgc aaaattctct tcgctttctc tcttttttag aagcacataa
     9961 gaaaaaataa aacttccccg attaaattca taaatatgtt tcaaccattt gcctcctctt
    10021 tctgtaagac aagattcagt ttcattcttc cttattgtat aaatatttcc ttcacaaaat
    10081 ctgaaataaa tccataaatc catcttatcc ataattaaag aaaaagtttc acctcgagat
    10141 tttgtcaaca attcgcaagg ttgcgatgtt gcaatcaaat agccgaaaga cattttttac
    10201 ctcatacatg gtcgaaatca gtttctgtta gttcagaatc cattttttcg tcaacaactg
    10261 aatccgcatt tttgaattaa cgttttcatc agctgccgtt tatctaaacc ggcaggttca
    10321 gtttcaaaat aagccttata tgaagactgt aagcatttca gaaaaagatc atcagaagac
    10381 atatctgccg aatcaaatac aactgttttg attttggtac ttacccaaaa ccctttttgc
    10441 tctttttcta ctatacggaa attcagaata tttccaaccg aatcaaaagc acggtaagca
    10501 tcatccatca aatcctgcgg ctctattttc ttttccaatt ccgacaatcc ttgaaatata
    10561 tccaaagaca catcttcaaa tagaaaaaaa ggaggagtta gaagcggttt ttccatgatc
    10621 tgtccgtaga ttttgattcc caagggcgat gacgaccaat tccctgtcca ggcaaagtct
    10681 tgcccgtatt atccgtaact cgacgatgat aatggggaaa ttttccaata ggatgacctg
    10741 ttctattacc gaaaggggct atccgcatat tattgccgat tttaatctca cgtccatatt
    10801 tagcaaagga aacaaccttt cctgcggcac ctacaccacc aggaattgcg cctaatccgc
    10861 cagcaatagc aacatctcta acagaagctg gtctgcctgt cgttgcataa ctaaaaccat
    10921 gctgtgtcca cataccaatg gcagcaccac ccaagatagc caatggaaga aacgccccct
    10981 cagtctcctt catctccttc tgagaaagct ccgccaactg catcggcgca tctgcccgcg
    11041 tatggaatac ttggttttca aatatctgat tgtccatgct gtttgccatc gccggagcgg
    11101 caatcattgt cagaatcatc atcgctgcgg taatttgttt tttcataata actcctttgg
    11161 attacaaggt tggaaaatca aagccctgct tagaacgtat gttgcacacc caatttcaat
    11221 aggtaaatca gattgcaaat ccagcaattt gaatattgtc attgttccgt gcaaaaggga
    11281 tttttattga tgagttgtgt actgggtttc agcttggctt tttagataat cttttcacaa
    11341 gaacatacat caatactgtc caaaaaaaaa agatttgata aatatattgc aacatatttt
    11401 attccacctc catccgaaac agaaaccaat atatttttaa ttaatacata gctgattatt
    11461 acatttatta ttcctataat atataaggat cttgccaaaa ttttttttga ttttatttta
    11521 ggaatatctc ttatccatgc taaaatacag cccaatgtcg aaaagaaaat aacagcaaac
    11581 actaccttac ctcctctcac ttccaaccaa accgatagca ggtttggttg gaagttggtt
    11641 tatttattat ttaacggcga atgtcagtgt tcttacccgt agaacctgca taaccattta
    11701 tgccaccagc aacagtcccc actgctacac ctcgcatacc attaatcaga attcttccta
    11761 ttttttcgaa tccactattt cttccaaaga tgcagcaaac gcaggttgag cctagaccca
    11821 atctacgttt gctgccgcat ctgatcccta ttgtttctta tccttacatc ttcctgcctt
    11881 gtcaatcaaa taaagacaga agactataca aaaactgacc gacatactga aaatacctat
    11941 ccccttccat gcaatctccg caccattgac ccaatagatt agactgagaa acaacaaagc
    12001 cacagtataa atcaacgtaa aaaatattgc gtaaagcaca ataaagggaa cttttatctc
    12061 acggttgttt tttataatat attcagcaac ttgatttccg aatatacctg ataaaaaata
    12121 tagtattaga tcatccattt cgtttatctt ctatgttttc ccattgcggc gctagaagac
    12181 tgatttaatg ctgcaccatt tgcacgaata actgcattag gaatagcatt tccccctttc
    12241 caagcagaac gggcaaaaac actagtagta atccctgcac cgcgcaacat cgcactgcta
    12301 tatccgccgc ctatcatacc accagcggtt gcagccaagg tacttcttgt tgaagcaaat
    12361 tgccctgttt taattttaga aatgccgtga ttagcccaag cactaattgc ccctcccatc
    12421 aaagcacctg ccacaatagg aagaaacgcc ccctcagtct ccttcatctc cttttgagaa
    12481 agctccgcca actgcatcgg cgcatctgcc tgcgtgtgga acacttggtt ttcaaatgtc
    12541 tgattgtcca agccgtttgc cattgcgggg gcaatcatag acagcatcat tacggctgcg
    12601 gtgatttgtt ttttcataac aactcctttg gattacaagg ttggaaaatc aaaacctgct
    12661 taaaatgtat gctgtacgcc caatttcagt tcggaactgc tttgccctga aacgttgaaa
    12721 cgtgcggatg cgtttaaagc cgtggttttg gtgaaaccga aacctgcgcc gaaatgggcg
    12781 taggtggatg tgtttcttgc ggattctttt ttgccgtcta tgcggtcggg ctgtttgccc
    12841 agccattgga tgcctccggt caggctgatt ctgtcgttgg cggcaaatga gatgttgggg
    12901 ttgagcagca ggtagttgcc cgatttgtag cggatgccgt ctgaaagggt tttgctgccg
    12961 ttgatgcggt aggcggcggt gagggaaagg acaatcggat ctatggcttt gtaggtggtg
    13021 gcgccgatga gccacgattt tcccgacgag gctttgttgc gcgatttttc gtaaaccgtg
    13081 ctttcaagaa agctgattag ggcggggttt ttgtcgtctt taaggaaggt gtggctgatg
    13141 ccgagggata cgtcggacat ccgtttgttg cgggttttgc tgttgccgtc gagtttgcgt
    13201 tcttcgtgcc acagatagct gccgctgccg taaatgtcgg tattcccggt cagtccgtag
    13261 cgcaaaccga gcgtgccaac gagcatatcg gtattgctgc cgttttcttg gatttcggtc
    13321 ggaatgggga taaacgaggt tgcgccggtt tggatgtaaa ccagtgcggc aagttcggcg
    13381 cggttgtttt cgctattcag gtaggtaagg gaagtttcca gtttccattt gcccttgtca
    13441 gtcattatgt cttcaatcgt caagggcagg tcggcataag cggataaagg caggatggcg
    13501 ggcaaggcgg gcaaaaagat gcgcttcata tttctcctat tgatattaat tcttatttaa
    13561 gaatagtaat gaatatccga taattttgtc taaataaatt tttaaatcaa aaaaaacgat
    13621 atatttgttt ttatcaatta tgttttgata tgccgtctga aaagtttgtg aaaaacggtt
    13681 acaatccgcc gcatgaaaaa acgcaataat cctcttccgt tgttgaacgg tgtcaaaccc
    13741 agttatttgg tgctgccgca tgaaaagcag ttttacgggc tgccgctgct gcattttctg
    13801 tgcatccgct ttccttttgt gggcgcggac gattggcgca ggcggttgaa cagcggtttt
    13861 gtggtcggtt cggatggtgc ggcgttggac gaacatactt tgttcgagcc gggtaaggtg
    13921 atgttttatt atcgggaaac cagcagtgag gatgagccgc gtattccgtt tgaagaaaag
    13981 attttgcata ttgatgagca tttgattgtg gtggacaagc cgcattttct gcccgtcatc
    14041 cccagcgggc gttttttaag ggaaacgctg ctcacacgtc tgcgcctgcg tcccgaattg
    14101 cagcatttga atgttgaaga cattacgccg ctgcaccgct tggacaagga tacggcaggc
    14161 gtgatgctgc tgtcgcataa tcctgccacg cgcggagcct atcagacgat gtttcaaaac
    14221 aaaacggtat ggaaaacgta tgaggcgctt gcgccgacaa ggacggattt gccgtatccg
    14281 ctcgatgtgg tttcgcgttt ggtgaggggt gagaaatttt ttacgacgca agaggcggaa
    14341 ggcgaaccaa acgcacatac gacggtcgaa ctgattgaaa acagggggga attcagcctt
    14401 taccgcctta cgccgcatac gggcaagaaa caccagttgc gcgtgcatat gatgggtttg
    14461 ggtatgccgc tgttgaatga cgcgctctat cccgtgccgt ctgaagcggg cagcgaggat
    14521 tatcggaaac ctttgaagct attggcaaaa aagattgcgt ttgcagatcc tttgtcgggt
    14581 cgggaaaggg tgttttgcag cggattttgc ctataatgag agggaacgca aacccgtatc
    14641 ggcggatgcc gccgatacgg gttttacatt atcgatgccg tctgaaaggg gttttatccg
    14701 ttcaggcata cgggcgcgaa gcggaggatg gtgtcgcgca ggacgatgag tttgccgtga
    14761 aagaaatgcg tggaaccggc gatggtaatg acgggcaaat cttgcggttc cgcccatttc
    14821 agtgctttcc cgatttcgac gacttcgtct tccgcgccgt gtatcatcag cgttttggca
    14881 acattgggaa cggcggacgg ctcggggcgg ccggtatagt ggcagactgc cgcgccgatg
    14941 agcagcaata aatcgggtat gcgcgcttgt gcggcaaatg tggcgacata accgccgaag
    15001 gagaagccgg ataaggcaaa ttcgggggct tcgggatgtt gggcacgagc atagtcgatg
    15061 acggcgatac agtcttgcgt ttcaccgtgt ccgtaatcgt gtgtgccttc gctgccgcct
    15121 acgccgcgaa ggttgggcag gtagcagtgg aagccgagtt tgcttaaggc tttggcggcg
    15181 gtttggatga ctttgttggt gttcgtcccg ccttggaggg ggttggggtg gttgatgacg
    15241 gcaacaccgc gtgccggtac ttgttcggac gggatatgga tggtttctaa aatgccggca
    15301 gggccgggta tgtgtatggt ttcaggtttt tgcataatgg tttcctcttg attttccgca
    15361 tattccgatg cagccgcgaa gatggcggct taaaggtgga aatgcttgcc gttgttgggg
    15421 ttggatgctt tcaggtcggc gagcatgcgg tggaagtcca atccgtaagc gttgctcagt
    15481 ttgtcggcac gttttttgag tttgtctatg ttttgctctt tggggctgct ttggaaggcc
    15541 attaccgcga cattgccgtg gctttcggca ggaagttcca agacgcgccc ttcaaaaacg
    15601 ctcaacaacc gttcgatgaa gcgttggtag cgtttgtcgc cgctccacca gttggttacg
    15661 aatatgccgt ctgaagagag tgcgtttcgg cagtctcgga aaaacggttc ttcaaccagc
    15721 gcatcgatga tttgttcgcc gtcgaacccg tccaccaaaa tcacatcggt gttgtggcgg
    15781 aagactttga tatattctgc accgtctgct tcgataattt caaatttctc gccctcgaaa
    15841 ggcaactcga acaggctgcg ggcaatggcg atgacctgcg ggttgatgtc cacggcggtt
    15901 tggcgcgtgt cgggcaggta ggtgtctatc cagcgtgcaa acgaaccgcc gcccaagccg
    15961 atttgggtga tatgctgcgg aagagcgtcg gtaaacagca gccatcccat catggcacgg
    16021 ctgtaagaga gtaccagctc ggacgggtgg tcgaggttca ttgagctttg gatggtgtcg
    16081 ctgcccaagt gaagcgaacg gatattgcct tcttcggaaa tgccgacttc gggaaagctg
    16141 gattttgcag gacgcaggcg gcggtaggga tgtcttgcca tcggtgtgaa cggtcggttt
    16201 gaaaggcaga tattttatca gaatgccgat ggttgtcctg cttcaaatta atttcttttc
    16261 aaataaatta cttattcgga tttgccgggg ctttcggata aattccttgc caaggtgcgg
    16321 cattgcctgc ataattcgct ttctttgccg gtatagctca gttggtagag cacctgactt
    16381 gtaatcaggg ggtcccgagt tcgactcttg gtgccggcac catttctgct gatggtgttg
    16441 caaaacattt cagtaagccg gtatagctca gttggtagag cacctgactt gtaatcaggg
    16501 ggtcccgagt tcgactcttg gtgccggcac cagatttgac agtccgattg tgtaaaacag
    16561 tcgggctgtt ttgcatttgc ggcacggtcg gtggcagggc tgcgggcatt tcactataat
    16621 agcccgtttc aaactgaaaa ggccgtctga aaagggcggg gtaacaatat ctgatgatta
    16681 ctgtgaacac actgcaaaaa atgaaggcgg cgggcgaaaa aatcgctatg ctgaccgctt
    16741 acgaatccag ttttgccgcg ctgatggacg atgccggcgt ggaaatgctg ctggtcggcg
    16801 attctttggg gatggcggtt caggggcgga aatcgacgct gcccgtcagc ctgcgcgata
    16861 tgtgttatca caccgaatgt gtagcacgcg gtgcaaaaaa tgcgatgatt gtcagcgatt
    16921 tgccgtttgg tgcatatcag cagagtaagg agcaggcgtt tgccgccgct gccgaactga
    16981 tggctgccgg cgcgcatatg gttaaactcg aaggcggcgt gtggatggcg gaaacgactg
    17041 aatttttgca aatgcgcggt attccggttt gtgcgcacat cggtctgacc ccgcaatccg
    17101 tgtttgcttt cggcggatat aaagttcagg ggcgcggcgg caaggcgcag gcgttgctta
    17161 acgatgccaa ggcgcatgac gatgcggggg cggcggtcgt gctgatggag tgcgtactgg
    17221 cggaactggc aaaaaaggta actgaaactg tttcctgtcc gactatcggt atcggtgcgg
    17281 gtgtggattg cgacgggcag gttttggtga tgcacgatat gctcggcatt ttcccgggta
    17341 agacggcgaa attcgtcaaa aactttatgc aggggcatga tagtgttcaa gcggcggttc
    17401 gggcgtatgt tgccgaagtc aaagccaaaa ccttccctgc tgcggaacat atttttgcag
    17461 attgaacggt ttacatgcag catgccgtct gaaagccgtt tcagacggca ttttgttttg
    17521 ccgtgcgcgg cgcgtataat cggcgcgttt tgtcgggcag gaagcccgaa agataaggat
    17581 taccgttatg caaatcatac ataccattcg agaactgcgc gcgtggcgta aaaatgcggg
    17641 aaaggtggca tttgtgccga ccatgggcaa tctgcatgaa gggcatcttg cgcttgtgcg
    17701 tgaggcgaaa aaacgcgcgg acagtgtcgt ggtcagcatt ttcgtcaacc gcctgcaatt
    17761 cggtcagggc gaggatttcg acaaatatcc gcgtactttg caacaggatg cggacaagct
    17821 ggaagccgag ggtgttgccg ttgttttcgc gcccgatgag aaagaactct atccgaacgt
    17881 ggaacagcgt tacaacgtcg aaccgcccaa tctgcaaaat gagttgtgcg gcaagtttcg
    17941 tccgggacat ttccgcgggg tggcgacggt ggtgtccaag ctgttcaata ttgtcgcgcc
    18001 ggatgttgcc tgtttcggca aaaaagacta tcagcagctt gccgtgatta aaggtttgac
    18061 cgaggatttg aattttgatg ttgaaatagt gcctgtcgat acggggcgcg cggaagacgg
    18121 tttggcactc tccagccgca accagtattt gagtgcggcg gaacgcgacg aagcaccgcg
    18181 cctgtactgc gaattaaagg ctgttgccga atccttggcg cagggcagtt tggattatgc
    18241 aggtttggag cggcaggctg ccgaccattt gaccgctgcg ggctgggtgg tcgattatgt
    18301 cgaaatccgc cgcgccgata cgctcgaagt ggcgcgggcg ggagataaga aactggtggt
    18361 cttggccgcc gcccgtctgg ggacgacgcg cctgattgac aatttggaaa taaaactccc
    18421 ttaaaccgca agcgtcggga atgccgtctg aagcggattt gcgtttcaga cagcatttat
    18481 ttttttgaac ggggtttcgc aaatctacaa acgattctgc ttgtgataaa gttacgcctg
    18541 attatatgcc gtctgaaagt tcggacggat gtcggataaa ggatgattat gctacctaac
    18601 cgtttcaaaa tgttaactgt gttgacggca gccttgattg ccggacaggt atctgccgcc
    18661 ggaagcggtg cgggggatat gaaacagccg aaggaagtcg gaaaggtttt aaggaaacat
    18721 cagcgttaca gcgaggaaga aatcaaaaac gaacgcgcac ggcttgcggc agtgggcgaa
    18781 cgggttaatc agatatttac gttgctggga ggggaaaccg ccttgcaaaa ggggcaggcg
    18841 ggaacggctc tggcaaccta tatgctgatg ttggaacgca caaaatcccc cgaagtcgcc
    18901 gaacgcgcct tggaaatggc cgtgtcgctg aacgcgtttg aacaggctga gatgatttat
    18961 cagaaatggc ggcagattga gcctataccg ggtaaggcgc aaaaacgggc ggggtggctg
    19021 cggaacgtgc tgagggaaag aggaaatcag catctggacg gactggaaga agtgctggct
    19081 caggcggacg aaggacagaa ccgcagggtg tttttattgt tggcacaagc cgccgtgcaa
    19141 caggacgggt tggcgcaaaa agcatcgaaa gcggttcgcc gcgcggcgtt gaaatatgaa
    19201 catctgcccg aagcggcggt tgccgatgtg gtgttcagcg tacaggggcg tgaaaaggaa
    19261 aaggcaatcg gagctttgca gcgtttggcg aagctcgata cggaaatatt gccccccact
    19321 ttaatgacgt tgcgtctgac tgcacgcaaa tatcccgaaa tactcgacgg cttttttgag
    19381 cagacagaca cccaaaacct ttcggccgtc tggcaggaaa tggaaattat gaatctggtt
    19441 tccctgcaca ggctggatga tgcctatgcg cgtttgaacg tgctgttgga acgcaatccg
    19501 aatgcagacc tgtatattca ggcagcgata ttggcggcaa accgaaaaga aggtgcttcc
    19561 gttatcgacg gctacgccga aaaggcatac ggcaggggga cggaggaaca gcggagcagg
    19621 gcggcgctaa cggcggcgat gatatatgcc gaccgcaggg attacgccaa agtcaggcag
    19681 tggttgaaaa aagtgtccgc gccggaatac ctgttcgaca aaggtgtgct ggcggctgcg
    19741 gcggctgtcg agttggacgg cggcagggcg gctttgcggc agatcggcag ggtgcggaaa
    19801 cttcccgaac agcaggggcg gtattttacg gcagacaatt tgtccaaaat acagatgctc
    19861 gccctgtcga agctgcccga caaacgggag gctttgaggg ggttggacaa gattatcgaa
    19921 aaaccgcctg ccggcagtaa tacagagtta caggcagagg cattggtaca gcggtcagtt
    19981 gtttacgatc ggcttggcaa gcggaaaaaa atgatttcag atcttgaaag ggcgttcagg
    20041 cttgcacccg ataacgctca gattatgaat aatctgggct acagcctgct ttccgattcc
    20101 aaacgtttgg acgaaggctt cgccctgctt cagacggcat accaaatcaa cccggacgat
    20161 accgctgtca acgacagcat aggctgggcg tattacctga aaggcgacgc ggaaagcgcg
    20221 ctgccgtatc tgcggtattc gtttgaaaac gaccccgagc ccgaagttgc cgcccatttg
    20281 ggcgaagtgt tgtgggcatt gggcgaacgc gatcaggcgg ttgacgtatg gacgcaggcg
    20341 gcacacctta cgggagacaa gaaaatatgg cgggaaacgc tcaaacgtca cggcatcgca
    20401 ttgccccaac cttcccgaaa accccggaaa taatgcaggt ccatcctttc agacggcata
    20461 aggtttgccg ggaagctgcg gcattcgggc aaacggcacg cagttcgcac gcgttttgca
    20521 cggcacgccg aacccgccgg ccggcaggat ggcacccgtt aaggaaattc tgatgaaaca
    20581 caccgtatcc gcatcggtca tcctgctttt gaccgcttgc gcgcaattac ctcaaaataa
    20641 cgaaaacctg tggcagccgt ccgaacacat cagcagtttt gcagcagaag ggcggttggc
    20701 agtgaaagcg gaagggaaag gttcgtatgc aaatttcgat tggacatacc aaccgcccgt
    20761 ggaaaccatc aatatcaata cccctttggg cagtacgctc gggcagttgt gtcaagacag
    20821 ggacggcgca ttggcagtgg acggcaaagg aaatgtctat caggcggaaa gtgcggaaga
    20881 attaagcagg cagctggtcg gtttcaaact gccaatccaa tatctgcata tctgggcaga
    20941 tggcaggcgt gtggcgggcg cgccttaccg catcctgccg gacggcatat tggaacaata
    21001 cggttggact gtcggcagaa ccgccgacag tggggggcaa gtccgaacgt tgcaactgaa
    21061 taacggaaat ttgaacatca ggctggtttt caccgaaatc ggtatgccgt ctgaaaccga
    21121 aaccccggaa cgctgtgcgg cgcgcacgag ataaggcgga cagatgaata ttgcggacgg
    21181 acggcaggcg tttcccgcac ctgcaaaact gaatctcgat ttgaggatta ccggcaggag
    21241 ggaagacggt tatcacaata tcgaaagcat attctgcctg atagatttgc aggataccgt
    21301 atatttgaaa ccgagggacg acggcaaaat catcctgcac aatccggttg atggaatgcc
    21361 gcaggaagta gatttgagct accgtgccgc atcgttgctg caaaaatatg cgcgcaaccc
    21421 cgccggcgtg gaaatatggc tggacaaaaa aatcccgaca ggggcgggtt tgggcggcgg
    21481 aagctcggat gcggcaaccg ttttgctggt gttgaaccgt tggtggcagt gcggtctgac
    21541 gcagcggcag ctcattgatt cgggcgcggc tctgggggcg gacgtaccgt tttttatttt
    21601 cggcaaaaat gcgtttgcgc ggggtatagg cgacaggctg gacgaaatgg atattccgaa
    21661 acagtggtat gtcatcgtca aaccgcccgt ccacgtttcc actgcaaaaa ttttcacaca
    21721 cgaaagcttg acacgaaatt ccgcctcaag cataatgccg actttccaaa atctgcaacc
    21781 gtttagaaat gatatgcagg cagttgtatt taaagaatac cctgaagttt ggaaagccta
    21841 ttccgagttg tcccgatatg gatttgcctt aatgacaggt tctggtgcgt gtgtattcac
    21901 ggcgtgtcaa gataggaata gcgcatacaa tatataccga caagtttcag atttgtacga
    21961 ggcatatttg gcagagggtc tttcaaaaca tccttggttg tccgtataaa cattgttggg
    22021 gagtcgtcaa gcggttaaga cactggattt tgattccagc atgcgaaggt tcgaatcctt
    22081 cctccccagc caagtcaaac gagttgggga gtcgtcaagc ggttaagaca ctggattttg
    22141 attccagcat gcgaaggttc gaatccttcc tccccagcca gccctttttg gggagtcgtc
    22201 aagcggttaa gacactggat tttgattcca gcatgcgaag gttcgaatcc ttcctcccca
    22261 gccagataaa agcgtgtaag cctgcttaca cgcttttatt tcatagaaat aaaaatattg
    22321 aaatgccttt gtttgtgtcg gatgttgcag gtataatgtc gggcttggta caagcagagg
    22381 gaagcattgt gttttctgag cggaagttaa acataaaatc aggtgagaat atggctgcgt
    22441 acgacagttt gatggtattt acaggcaatg ccaatcccga attggcacaa cgtgttgtca
    22501 ggcatttgga catttctttg ggcaatgctt ccgtatccaa gttttcagac ggcgaagttg
    22561 ccgtcgaact gttggaaaac gtacgcgggc gcgatgtttt catccttcag ccgacctgtg
    22621 cgccgaccaa tgacaacctg atggaaatcc tgacgatggc ggatgcactg aagcgtgctt
    22681 cggcaggtcg tattaccaca gccattccgt atttcggcta tgcgcgccaa gaccgccgtc
    22741 cgcgttccgt ccgcgttccg atttctgcca aactggtggc aaatatgctg tattcggcag
    22801 ggatcgaccg tgttttgact gtcgatttgc atgccgacca gattcaaggt ttcttcgata
    22861 ttccggtgga caatatttat gccaccccga ttctgttgaa cgacatcaaa caacagcgga
    22921 ttgaaaatct gaccgtcgtc agcccggaca tcggcggtgt cgtccgcgcc cgcgccgtgg
    22981 caaaatcctt gaatgccgac ttggcaatca tcgataaacg ccgcccgaaa gccaatgtgg
    23041 cggaagtcat gaacatcatc ggcgatattc aaggcagaac ctgtctgatt gtggacgata
    23101 tgattgacac cgcgaatacc ttgtgtaaag ctgccgtcgc cctgaaagag cgcggtgcgg
    23161 aacgtgtctt ggcatatgcc agccatgcag tattctccgg agaggcggtc agccgtatcg
    23221 cctcatccga aatcgaccag gtggtcgtaa ccgataccat tcctttgtct gaagcggcta
    23281 aaaactgcga ccgtatccgt caggtaacga ttgccggtct gttggccgaa accgtccgcc
    23341 gcatcagcaa tgaagaatcc gtctcatatc ttttcaatga agaagtgatg acaggcagca
    23401 tgttgttgcc gtaaccccga tgccgtctta agctggtcgc ggccgatgac ggcgatttta
    23461 cctaacttgg agtatttaac atgacttatg aaattcaagc ctctgttcgt gaagcacaag
    23521 gcactggtgc gagccgccgc ctgcgtcgcg aaggccaaat ccccggcatt ctgtacggtg
    23581 aaggtcaaga gcccgttgcg attgccgtag atcacaaaac cgtattctac gcattggaaa
    23641 aagaatcttt ccataccgcg ttgattaagt tgtctctgaa cggcgaaact aaagacgtta
    23701 tcgtccgcga tttccaaatg cacccgttcc gccgcgaagt ccaacacatc gacttccaag
    23761 ccgttaaagc cgatcagctt gtacgcatcc gtgttcccct gcacatcgtt aacgctgaaa
    23821 attcccaagc ggtcaaactg caaggcggcc gcgtatctct gttaaacact tctgttgaag
    23881 tagttgcttt gcctgccaac atccctgctt tcttggattt ggattgtgcc gaagtggttg
    23941 ccggcgacat tctgcacttg tcagacatca aactgcctga aggtgtagaa agcgtttccc
    24001 tgaaacgtaa cgaaaatctg gctgttgcta ccgttaccgg taagaaacgc taattgattg
    24061 aaaagcaggc ggtacgtata tgatgcgtac cgccttattg tttttggctg tgtttcaata
    24121 tttggttgat ttcatccgtt tataagggaa aaccgcttat ttccgttcgg gtggaaattt
    24181 atccagacgt attgcgcgac aacggatggt tggctcaaaa acggcatttc gtaccggatg
    24241 aaaatgaaga agatatgtcg ttcacattcc ggtagctgtc cggctcgaac cggctatcag
    24301 agatagtcgg tcaattttca ccctgaaaat cacttttctt ttaacttgca acatattccg
    24361 ataaaatgga cactttgtaa gtaatcattg atggaagacg caattatggc aaccgaaccg
    24421 aaccgaaccg aaccgaaccg aaccgaaccg aaattataca cgatttagaa gataatttca
    24481 aacaaaacaa tatattaaaa ctcaaacaac tctttcccga agtcttttgt gaagaccaaa
    24541 ttgactttga aaagctcaaa ctcgtcctcg gcgcagaaaa ccttgccggt gcgggcgaac
    24601 gttatcaact cgattgggcg ggcaaaaccg cctcctatct caacctgcaa agccccactt
    24661 cccgcaccct cgtcccctgc aaagaagaat ccgcagattt cgacggcacg caaaacgtgt
    24721 ttatcgaagc cgaaaacctc gaagcactga aaatcctgca aaaatcctac gccggcagcg
    24781 taaagatgat ttacatcgac ccgccctaca ataccggcaa cgattccttc gtctatcccg
    24841 acaaattctc cgaaagccgc gaagaatacg cccgccgcgt gggcgatacc gacgacgcgg
    24901 gttacctgaa gcgcgacggc gtgttccagg gcgcgtggcg caaaaacggc aaagacagtg
    24961 gccattacca cagcaactgg ctctctatga tgctgccgcg cctgcatctg gcgaaaaccc
    25021 tgctgcgcga agacggcgtg atttttatca gcattgacga caacgaacag gcgcagttga
    25081 aattgttatg tgatgaagtg tttggggcgg agaattttgt cggtcagttt ccttggcgca
    25141 aacgcacggc aaaatcggac gtgccgttcg gcgtttccgc cgattatgaa tatctgcttg
    25201 cctatgcccg cagtaatgcc tttattgcca gtatcgatgc ggaagaacgc agatattttg
    25261 aaaccgatga tttcccgaat cgcccgtggc ggacgcatga tttgactact caaagaaatg
    25321 ccagtgaacg accaaatagt tttttcacta tggttaatcc taaaacaggc aaagaatatc
    25381 cggcgaatcc aaatgcaact tggcgtgtta ctaaggatac atttcaagaa tattacaatg
    25441 cgggaaaaat cgttttcccc gatgattacg atttcctcaa aattaaaaac cccgttatgc
    25501 gttattttaa agatgacgac atgaagaaag acggagagcg cttcggacgt aaggcagtca
    25561 gtacacggct acctgaaaat gtaggtatgt cgctgaacgg tacaaaagaa attaccgaac
    25621 tgtttaaaag caagttgttt gattttccca aaccgtcatc cctaattaaa tatttactgc
    25681 aaatcctcca tgtttcagac ggcctcatcc tagacttctt ctccggcagc ggcactaccg
    25741 cccatgccgt gatgcagctt aacgccgaag acggcggctg ccgccgtttc atctgtgtcc
    25801 agcttcccga agaaaccgac gaaaaatccg aagcgcgcaa ggcgggtttc aacacgattg
    25861 ccgaaattgc caaagaacgc atccgccgcg cgggcaggca gatttcagac ggccttcaag
    25921 agggagcgga aatagatacg ggttttaaag ttttcaaact tgccgaaagc ggtttcaaac
    25981 aatggcggca gcccgagcag tccgatacgg aagccctgca acgcgaattg tcgttgaata
    26041 tcgattctgt gctgtccgaa acgtcgtctg aaaatctgct ctacgaattg atgctgcgta
    26101 tgggcttgaa gctgacttgc aaggtttcgt ttttagacga cgtatatttc gtggaagacg
    26161 aggatacggg cgggctgtac gctttcctgc tgaaacgcgt ggatcaaggt ttgattgatg
    26221 ccgtgctggc gaagcatccc gctaaggtgg cggcattgga caggctgttt gagggcgacg
    26281 atgcgcttaa aagcaatacc gtattgcaga tgaaggatgc gggcgtgatg ttcgagtgtg
    26341 tgtagtcagc cgaaagcggg aagtgccgtc tgccgtcatt cccgcgcagg cgggaatcta
    26401 gaaactcaaa gttgcaagaa tttatcggaa atgactgaaa cccaacgaac ctagattccc
    26461 actttcgtgg gaatgacgat atatcagttt ctgcgccgac aggtctggat tcccgcctgc
    26521 gcgggaatga cggcaaagag gtagattttc cgcgcgacag cggatagaag gaaataaaaa
    26581 tggaactgaa atttgaagaa ctgccctatc agcttgatgc ggtaaatgcc gttgcgaatc
    26641 tttttgcagg gcagccgaac catgcccgga cattcgattt gaccagtcag gggacggggc
    26701 ggtttgtcgg caacggcttg gatttggatt gggaaacgct aggcctgaat ctgaacacgg
    26761 tgcaaaagca aaatggacag cctgaaacgg aaatcggcgc gcacgggctg aatttttctc
    26821 tagaaatgga aacgggtacg ggcaaaacct atgtctatct gcgcacgatt tacgaattaa
    26881 accgcagtta cggctggaag aaatttgtta ttgtcgtacc gagcgtaccg atacgcgaag
    26941 gcgtgttgaa aagcctggaa attacgaagg cgcattttga cggagtgttc ggcaggcccg
    27001 tgatgcgtta tgcggaatat tcaagcagcc ggctatcgga cttgcgcact tttgcggtaa
    27061 acgaccacat cgagattttg gtgatcaata tccagtcgtt tgaaaaagat ggaaacgtta
    27121 tcaataaggt aaacgaaagc ggggaaacgc cgattaagtt tattcaggaa acgtgtccta
    27181 tcgttattat cgacgagccg cagaatatgg aaacggaagg ccgtctgaac gctttggaat
    27241 cgctcaatcc gctctttacc ctgcgctatt cggcaacgca taaacaaccg taccacaagg
    27301 tttacagcct gaatcccgtg caggcataca atttaaagct ggtaaagcaa atcgaagttt
    27361 tgccggtatt ggcggaaaac gatgtgaacg gcgcatttgt ggagctgctg gaagtaaagc
    27421 aggcggccaa aggccgtccg aaagccgatt tgaacattca ttatcaggat aaaaaggaaa
    27481 ccaagaagaa aaaggtatcc gtcaaatggg aagacgattt gtttgaaaaa tcgggcggta
    27541 acgaagccta ccgccacggt ttcattatcg acggcatgga tttcgataag caggaattgg
    27601 cgttctcaag cggtaaaacc attacgcgcg gcggagacgg cgatgcggtg cgcgatgaaa
    27661 ttatgaaaaa ccaaatccgc gaaacggtaa gggagcattt ggcgaaggag aaacggctga
    27721 atccgctggg gattaaggtg ttgtctctgt tcttcatcga ccgtgtggag aattaccgta
    27781 cagaagacgg aacggcaggc aagtttgccc tttggtttga agaaatctat cgggaacttg
    27841 caggcaatac cgatacggca ggcgtacacg acggctattt ctcgcaagac aggaaaggcc
    27901 gtctgaaaaa caccgacggc acgacgcagg cggacaacga tacctaccgc ctcattatgc
    27961 gcgacaagga aaccctgctt tcctttgaca gcccgctgcg ctttatcttt tcccattccg
    28021 cactgaaaga aggctgggac aaccccaacg ttttccaaat ctgcacgctc aacgaaaccc
    28081 gttcgccgct gaaaaagcgg caggaaatcg ggcgcgggct gcgtatcgcc gtcaatcagg
    28141 aaggacggcg cgtgcgcgat gaaaacgtga acatactgac cgttgtgccg aacgaaagct
    28201 acgaattgtt tgccgccaat ctgcaaaagg aatacgaaga cgaatgcggt attaaatttg
    28261 ccgccgaaaa catcaaaaac ggcaataaga agaaaaaaca gttattccgc aaagatttcc
    28321 cgctcgaccc cgaatttcag gcaatttggg acaagttgaa atacaaaacg cgctatcgcg
    28381 tgcgcttcga tacggaagaa ttgatcaaac aggcttcgga agcggtggca aacctgccgg
    28441 aaatccaaaa accgaaaatc cgcatccgca aggcgcaatt aaaacaatca caaacctacg
    28501 gtatcgaaac agttgaaatt gccggccgca gccgcgaaat ggacgttcaa tgggagattc
    28561 cggacatact cggcgagatt caaagaaaaa cggggctgac gcggcgcacg gtgtacgaaa
    28621 tcatcataca gtcaggccgt ctgaaagatg tagccggtaa tccgcaacgc ttcatcgacc
    28681 ttaccgccga agcggtaaac cgcagcctgc acgcgttgat ggcggcagga atcgagtatg
    28741 agagaaccgg cgaagtgtac gaccaaaagc tgttggaaga tatggcgcgc gaaggtatcg
    28801 agttttacga aaacggtttt acattcacag taagcaatcc gcaaaaaacc atttgcgaaa
    28861 actacatccc tttggattcc ggcacggaaa aagcctttgc ccaaaattgc gaggattatg
    28921 atgcgaaaaa tgaaggaggc gtggcgtttt acttcaaact gcccggctgg ttcaaaatcc
    28981 cgaccccgct gggcaattac aatcccgatt gggcggtggt aaaacaggtt cgggataaag
    29041 tgtatttcgt tgcggaaacc aaaaacaccg gcaaaggcat tcagaccggc gtggatatgg
    29101 acaagctgcg ccaaaatgag aggctgaaaa tcaaatgcgg caagcggcat tttgaagcgc
    29161 tgggcggttt ggcataccgt gttgtggaaa aagtggggga tttaaagtcg gaaaaagagg
    29221 agcaggctta aaacaaacag gtgtaatcgt agtatggcga tgttggattg gggcggcggc
    29281 aaccgaagat gcggatatgg taatggcttt gattgggtaa accgatcggg gactgaagat
    29341 tgtttcagac ggtctgttga ttttcttatt tcggaaatgg gaagatggaa ggctattgcc
    29401 ctgtcagacg cgtccaaagc ctttgccacc ggcttctttt ttctacattt tccagtgcga
    29461 cgatttcttt ttcggcaagg gtgtatccgt tttgtctgat tttgattttt cctaaaatct
    29521 gccccttttt taccggggcg ggaatcggct gtatggtttc caaaatttgt tcggttgttt
    29581 tcgcttcctt atgtggcaga gtgatgtagg cttctttgag gaagcctgcg cggacggttt
    29641 ttttgctgcc tccggaaatt tggatttggg caacggtttt gcctttcgga tatattttgg
    29701 gcgtatcgaa ggcttgcaat gcccggttca gcagcttgct gttgtctgat gcgcgtgttt
    29761 ccgccgattc cgaacccaat gtgatgacaa ggatgtgcct gccgttgccg gagtatgaca
    29821 cggcaaggtt gtagccgccg ctttctgtgt gtccggcttt cagaccgttt acattgttgt
    29881 ccctatataa aaggatattg cggttgtttt gctctatatt tttgaatttg aaagatttga
    29941 tggaaaacag cgggtaatat tccggaaagt cgcgcatcaa tgcttcagac agcagggcga
    30001 ggtctttggc ggtggaaacc tgtccttctc tactcaagcc tgtcgggttt ttgaatacag
    30061 tgttcttcat gcccaagcgt cgggcttctt tgttcatttg ttgcacaaaa ttttcaatcg
    30121 agccgttgcc cagtcggccg acaagggtta gggcggcatc gtttgcggat agtgcaatca
    30181 tgccttttaa gagtttgtcg gtgctgaccg tatcgccggg acgtacaaac attctgcttc
    30241 cttctgaagc ccatgcggat tcgggtattt ttaagttttc ttcagatcgg atatttcccg
    30301 atttcatgtt tttgaaaacc agatatgcgg tcatcagttg ggttagtgcc gccggttcga
    30361 caggggtatt gatgtttttg gcggataaaa tctgtttgct ttgaaggtcg ataacgatgt
    30421 gtgccgctgt gagggtttcg ggtgtttgga acgtgggggc ggcgtgtacc gccggtttgt
    30481 tgggcgcggg cgatgcggcc gttgcgtgag aaacgcctaa gatgatggaa agcaggacgg
    30541 gcaggatttt atgtgctgtc atgaaatatt ctaattgtgt gcgtgtttca gtctgccgat
    30601 tatacgctta gggtgtctga tcgggcggat ttttcttgct ttcgcgccgt cttgggcgta
    30661 tggttttggg ttttgcgatt ttaataaacc gattatccca tattgaatta tgaacacgcc
    30721 ccttccttat tccaattacc tcatccgcat cctgacggca tctgtctatg atgtcgcggt
    30781 cgaaacgcct ttggaaccgg cacgcagcct ttctgtacgt ttgaaaaaca acatcctttt
    30841 gaaacgcgaa gatttgcagc cggttttttc gttcaaaata cgcggcgcgt acaacaaaat
    30901 gtccaagttg ccgaaagatg cgctcgcttg cggcgtgatt gcggcaagcg cgggcaatca
    30961 cgcacaaggc gtggcattgt ccgcacagcg tttgggttgc cgtgccgtta tcgtcatgcc
    31021 ggagactacg ccgaaaatca aagtggatgc ggtcaaaagc cgtggcggcg aggtggtttt
    31081 gcggggcgtt tcatacaacg atgcctacga ttatgcgatg gagttggcgg aaaaagaagg
    31141 gttaacctat atcgcgccgt ttgatgatcc tgatgtgatt gcgggacagg ggacggtggg
    31201 gatggaaatt gtcagccagc atcccgatcc aatccgcgcc gtattcgtac cgataggcgg
    31261 tggcggtttg gcggcgggcg tggcggcatt tatcaagcag gtccgccccg aaatcaaagt
    31321 tatcggcgtt cagaccaacg attcctgctg tatgaagcag tcggtcgaag cgggtgaaat
    31381 cgtccatttg aaagatgtcg ggctgttttc agacggcact gcggtcaaag tcgtcggaaa
    31441 cgaaaccttc cgcctctgca aagaactttt ggatgaaatc attacagtcg ataccgatgc
    31501 ggtttgcggc gcggtcaagg atattttcga tgacacgcgc agcattaccg agccggcggg
    31561 cgcgttggcg ttggcgggtc tgaaagccta tatcgcccga gaaggcgcgg aaaaccaaac
    31621 cctgattgcc gttaccagcg gtgcgaatat gaattttcac cgtttgcgcc acgtttcgga
    31681 acggagcgaa ttgggcgagg gcaacgaagg tatttttgcc gttaccatcc ctgaagaacg
    31741 cggcagcttc cttaagtttg tcaatatatt gggaaatagg aatattaccg agttcaacta
    31801 ccgctacggg gacgatgaaa aagcgcatat ctttgtcgga cttcaagcgg caggcccgca
    31861 ggatttggcg gttatcggca gccggttgga tgaggcggga ttgcccaatg tcgacctgac
    31921 cgatgatgag attgccaaaa tccatatccg ctatatggtc ggagggcgga cggacaaagt
    31981 agaaaacgag cgtctggtca gttttgagtt tccggagcgt ccgggggcgt tggcgcgttt
    32041 tttgaaccat atgcagggcg gttggaacat tacgctcttc cattaccgca accacggtgc
    32101 ggattacggg cggattttgg tcggtatcga tgtgccgccg cacgatgccg ccgcatttga
    32161 cggtttcttg gaaagtctgg gatacagcta tcacgaggaa acgcaaaatg ccgcgtacaa
    32221 gctgtttctt gcctgacgct tgaaagcaca atgccgtctg aaagcctttc agacggcatt
    32281 gcgctttcat ggttaaatcg aatattcaat cagttcgttt tgagagaaga cataaacctg
    32341 tttcggaatc agcttcaatt ctttgccttc ggcgattggg taacgcgcgg catcgctgcc
    32401 agccagcgtg atatgcacgt cttgtttgcc gtgtttcacc aaaatatgcg tcaatgcccc
    32461 gacggcgtgg actttttcga tttcggcaca aatcatcggt gtttcgtgtt cggcggcgat
    32521 ctgccattcg tgcgggcgga tatagccggt ggcggtttgt tcctgccatt tgtattgtgc
    32581 gtccaatttc cacgcgaagc cgttataatg ccagaagcct ttttcgatgc gtccttcaaa
    32641 agcgtcggtt tcgccgagga actcggtaac gaaggcattt tcgggtttgc ggtaaatagc
    32701 ttcggcgctg ccggtttgtt cgattttgcc gtggttcatc acgacgattt cgtcggaaac
    32761 ttcgagggct tcttcttggt cgtgcgtaac cagaatgctg gttacaccca ggttgtgatg
    32821 gatgtcgcgc agccaggtgc gtaattcttt gcgtactttg gcatccaacg cgccgaaggg
    32881 ttcgtccaaa agcaggagtt tcggttcgac cgcaagcgca cgggcgaggg cgatgcgctg
    32941 gcgttgcccg ccggagagtt ggtgcggata ggattttgcc aaatgcgaga gctgcacgag
    33001 cttgagcaat tcttcgactt tggcgcggat ttgtcctttg gacgggcgtt cggacttggg
    33061 caatacggtc aaaccgaagg caacgttgtc aaacacgttc atatggcgga aaagggcgta
    33121 gtgttggaac acgaagccga ctttgcgctc gcgcacgtgc ttggcggtta cgtcttgccc
    33181 atcaaacaga atcttgccgc cgtcggcgtt ttccagtccg gcgataatgc gtaaaagcgt
    33241 ggttttgccg cagccggacg ggccgagcag ggaaacgagt ttgccggtgg ggacgttgag
    33301 gttgatgttt ttcagcgcgt gaaaattgcc gaagtgtttg tttaagtttt ggatggtgat
    33361 actcatactg cgttcctttc ggcggcggcg agttttttgt cttgtaattt ggtgatgatg
    33421 ttctgcaccg ccagcgtcgc cagtgccaaa agtgccaata cgccggagag ggcgaatgcg
    33481 ccggtgaagt tgtattcgtt gtagaagatt tcgaccaaaa gcgggacggt gttggtttcg
    33541 ccgcgtatgt gtcccgatac cacgctgacc gcgccgaact cgcccatcgc gcgggcgttg
    33601 gtgaggatga tgccgtagag taacgcccat ttgatgttgg gcagggtaac gcgccaaaac
    33661 atctgccagc cgcttgcgcc gagtatcaat gccgcctgtt cttcgctgtc gccctgtgcc
    33721 tgcatcagcg ggatgatttc gcgtgcgaca aaggggaagg taacgaacag cgtcgccaaa
    33781 acaataccgg ggatggcgaa gataatctgt atgccttgcg cttcgagccg gccgcccaat
    33841 gccgtgtgcg cgccgaacaa taagacgaac attaaaccgg ccaccacggg cgatacggaa
    33901 aacggcaaat cgagcagggt agtcagcaac tgcttgccgc gaaaatcaaa acgggtcagc
    33961 agccacgcca tcgccacgcc caagacggca ttgacgggga cgacaatcag cgcggtaatc
    34021 agcgtcaatt tgatggcaga ccacgcttcg ggatcgttta aggatttcag gtacaaatcc
    34081 caaccgcctt ttaaggcttc gtaaaacacg gcgacgagcg gcacgaccag catcagcagc
    34141 agaaagccca gcgcggcggc aatcagcaac acgcgcagcc ggcgcggttc ggtcaggttg
    34201 ggattggcgg aatagggttt catggcggtg gtgttctctg gttggtttta aaatgtttgg
    34261 aggtcgtctg aaaaactgtg tttttgggag cggattcgtt ttcagacaac cttttattga
    34321 ttaagggaat aaaaacgtct agctaccgtc attcccgcgc aggcgggaat ccaccacagg
    34381 gcaacaggaa aacagaaaat aaataaggca gccgaaattc accaatggat tcccgcctgc
    34441 gcgggaatga cggtaacagg tatttcagac gacctcaacc cttcgcgccc gaacgcctgc
    34501 ccaacgccca cagcatcacg ttcagcgcaa acagaatgac aaacgaaacc agcagcataa
    34561 acaacgccac cgccgacgcg ccctgtacgt cgaactgttc cagcttgccc gtaataatca
    34621 gcggcaggat ttcagaaacc atcggaatat tgcccgcgat aaaaatcacc gagccgtatt
    34681 cccccgttgc ccgcgcgaac atcattcccg cgccggtcaa gagtgccggc gtgatttccg
    34741 gcagcagcac gcggcggaac gtcgtaaagc ggtttgcgcc caaagtcgcc gccgcttcct
    34801 catattcgcc cgataattcc tccaacaccg gctgcacggc gcggacgata aagggcaggc
    34861 tgacgacgac cagcgcaatc caaatgccga cgggcgtaaa cgcgattttg atgcccaaag
    34921 gctcgaaaaa acggcctatc caaccgttgg gcgcatacag ggttgccaac gcgatacccg
    34981 taaccgccgt cggcagcgca aacggcaaat caaccagcgc gttcgccaga cccttgcccg
    35041 gaaattcata gcgcaccaat acccacgcca ccagcgtgcc gaacacgaca ttggtcagca
    35101 tcgcataaaa cgacatccgc aaactcagcc acaccgccgc caacacgttc ggctcggcaa
    35161 tcgtgttcca aaagccgccc cagccgattt ccgccgcctt cgccgccatc atcgcaaacg
    35221 gcaagaccac aagcagcgac aggcacaata cggtcagccc gaggctgagt ttgaagccgg
    35281 gcagtacgcc gggcgttttg agcggtaaca taaaacaatg ctgaaaataa ggaaaaggaa
    35341 ggactacttt aacgatgccg tctgaaaaac ggaaagaatg gaaagtttgg tacaaagacg
    35401 aatttgttat aaagcggttg gcagtttctc aagcgggcgc gatgttttaa aatatagtgg
    35461 attaaattta aatcaggata aggcgacgaa gccgcagaca gtacaaatag tacggcaagg
    35521 cgaggcaacg ccgtactggt ttaaatttaa tccactataa cgccttgttt tgacggaaaa
    35581 ccatcatata aaggaacact tatgcagatt ttatcttttc agccggacat tgcggaacgt
    35641 atgctggaag gtacggaagg cgagtcggtc aacgaaaacg cacaattcgt ccgtacggac
    35701 aacggctatt ggattgcgtg gcatgaaggc gtagcggcac tgcttgcgcc cgatacgccg
    35761 ccgggcattc cctgtttttg ggtggaaggc gcggaaagcc ttgaagagtt gtgcgtcatg
    35821 gtggaacgcg gcgagtttga cgaagtggaa gagtttgacg gcgatgacga cgaatggctc
    35881 gaaacggcac agggttgcgg gcaccacggc gaagcttgcg cctgcggaca ttaaaggcat
    35941 tgcaggcttg ccgcaagggg gcaaggcttt gccgtttttt aaataatcgg tggattgcat
    36001 ctgtttgcaa tgggctgaac gcttcccttt gtattttatt gaataaaaaa acttatcttg
    36061 gtattataat taaggcagca tcaattattt tgggatggca ataaacgcaa agcattgatt
    36121 tgcgccgatt gcagacttat tatagcaggt tgcggcgcgg acttaatggg aattgtttat
    36181 agagcatgat ggtctgaaac atcattaatt aaaaatacca ttaatccgat ttatatttat
    36241 ttcaatttca atggaaaaac atcaatgaca atgattttaa gcattttaag cctgtttttt
    36301 atcatcagac tgttattttt agccgtctct attaaacatg aaaaagcctt gattgccaaa
    36361 ggggcgaaac aatacggaaa aaccaattcc acgctgcttg cggcagttca tacgctttat
    36421 tatttggcgt gttttgtttg ggtatggctt tctgacactg cttttaatgg catatccttg
    36481 attggtacgc tgacggtgat ggcttcgttt gtgatattgt cattgattat taagcagttg
    36541 ggggagattt ggacggttaa aatctatatt ttaccaaatc atcaaattaa tcgttcgtgg
    36601 ttgtttaaaa cattccgcca ccccaattat tttttaaaca tcatacccga actgattggc
    36661 atcgccttat tatgtcaagc gtggtatgtt ttattgattg gcctgcccat ttatttgctg
    36721 gtcttattta agcgtatccg acaagaagaa caggcgatgg caacactttt ttaacccgtt
    36781 tcatcaatta tag
//
LOCUS       DAWITQ010000004        36497 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.004, whole genome shotgun sequence.
ACCESSION   DAWITQ010000004 DAWITQ010000000
VERSION     DAWITQ010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 36497)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36497)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36497
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.004"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            71..146
                     /locus_tag="WIX18_000191"
     tRNA            71..146
                     /locus_tag="WIX18_000191"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:104..106,aa:Thr,seq:cgt)
     gene            222..1349
                     /locus_tag="WIX18_000192"
     CDS             222..1349
                     /locus_tag="WIX18_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEZ5237355.1"
                     /translation="MNTSQRNRLVSRWLNSYERYRYRRLIHAVRLGGAVLFATASARL
                     LHLQHGEWIGMTVFVVLGMLQFQGAIYSKAVERMLGTVIGLGAGLGVLWLNQHYFHGN
                     LLFYLTVGTASALAGWAAVGKNGYVPMLAGLTMCMLIGDNGSEWFDSGLMRAMNVLIG
                     AAIAIAAAKLLPLKSTLMWRFMLADNLTDCSKMIAEISNGRRMTRERLEQNMVKMRQI
                     NARMVKSRSHLAATSGESRISPAMMEAMQHAHRKIVNTTELLLTTAAKLQSPKLNGSE
                     IRLLDRHFTLLQTDLQQTVALINGRHARRIRIDTAINPELEALAEHLHYQWQGFLWLS
                     TNMRQEISALVILLQRTRRKWLDAHERQHLRQSLLETREHG"
     gene            1530..2087
                     /gene="frr"
                     /locus_tag="WIX18_000193"
     CDS             1530..2087
                     /gene="frr"
                     /locus_tag="WIX18_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HEZ5237356.1"
                     /translation="MINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEY
                     WGSMVPVSQVANVTLLDARTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPM
                     PMLTEERRKDLIKVVRGEAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAV
                     QKLTDKYITEADKLLTAKEEDLMAI"
     gene            2143..2889
                     /locus_tag="WIX18_000194"
     CDS             2143..2889
                     /locus_tag="WIX18_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HEZ5237357.1"
                     /translation="MKSSTQAVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGL
                     DALENMVKHCAKLGVQYLTVFAFSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNM
                     RLKILGSRERFNRQILQGIEEAEALTANNTGLTLSIAADYGGRWDILQAANKLIAEGV
                     SEITEDTLAKHLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGK
                     ALDDAVASFQKRERRFGRTSEQLPIEQQRN"
     gene            2892..3689
                     /locus_tag="WIX18_000195"
     CDS             2892..3689
                     /locus_tag="WIX18_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HEZ5237358.1"
                     /translation="MLKQRVITAMWLLPLMLGMLFYAPQWLWAAFCGLIALIALWEYA
                     RMSGLCKIKTNHYLAATLVFGVVAYAGGWMLPNLVWYVVLAFWLAIMPLWLRFKWRLN
                     GGWQVYAVGWLLVMPFWFALVSLRPHPDDALPLLAVIGLVWVADVCAYFSGKAFGKHK
                     IAPAISPGKSWEGAIGGAVCVAVYMTAVRSAGWLAFDTGWFDTVLIGLVLTVVSVCGD
                     LLESWLKRAAGIKDSSNLLPGHGGVFDRTDSLIAVISVYAAMMSVLN"
     gene            3694..4929
                     /locus_tag="WIX18_000196"
     CDS             3694..4929
                     /locus_tag="WIX18_000196"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HEZ5237359.1"
                     /translation="MPSENASDGIRYKVIPIMTPQVLTILGSTGSIGESTLDVVSRHP
                     EKFRVFALAGHKQVEKLAVQCRTFRPEYAVVADAEHAARLEALLKGDGTATQVLHGAQ
                     ALVDVASADEVSGVMCAIVGAVGLPSALAAAQKGKTIYLANKETLVVSGALFMETARA
                     NGAAVLPVDSEHNAIFQVLPRDYAGRLNEHGIASIILTASGGPFLTADLNTFDSITPA
                     QAVKHPNWSMGRKISVDSATMMNKGLELIEAHWLFNCPPDKLEVVIHPQSVIHSMVRY
                     RDGSVLAQLGNPDMRTPIAYCLGLPERIDSGVGDLDFDALSALTFQKPDFDRFPCLKL
                     AYEAMNAGGAAPCVLNAANEAAVAAFLDGQIKFTDIAKTVAHCLSQDFSDGIGDIGGL
                     LAQDARTRAQARAFIGTLR"
     gene            4964..6304
                     /gene="rseP"
                     /locus_tag="WIX18_000197"
     CDS             4964..6304
                     /gene="rseP"
                     /locus_tag="WIX18_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEZ5237360.1"
                     /translation="MHTLLAFIFAILILVSLHEFGHYIVARLCGVKVVRFSVGFGKPF
                     FTRKRGDTEWCLAPIPLGGYVKMVDTREGEVSEADLPYAFDKQHPAKRIAIVAAGPLT
                     NLALAVLLYGLSFSFGVTELRPYVGTVEPDTIAARAGFQSGDKIQSVNGTPVADWGSA
                     QTEIVLNLEAGKVAVGVQTASGAQTVRTIDAAGTPEAGKIAKNQGYIGLMPFKITTVA
                     GGVEKGSPAEKAGLKPGDRLTAADGKPITSWQEWANLTRQSPGKKITLNYERAGQTHT
                     ADIRPDTVEQPDHTLIGRVGLRPQPDRAWDAQIRRSYRPSVVRAFGMGWEKTVSHSWT
                     TLKFFGKLISGNASVSHISGPLTIADIAGQSAELGLQSYLEFLALVSISLGVLNLLPV
                     PVLDGGHLVFYTAEWIRGKPLGERVQNIGLRFGLALMMLMMAVAFFNDVTRLLG"
     gene            6361..8754
                     /gene="bamA"
                     /locus_tag="WIX18_000198"
     CDS             6361..8754
                     /gene="bamA"
                     /locus_tag="WIX18_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HEZ5237361.1"
                     /translation="MKLKQIASALMVLGISPLALADFTIQDIRVEGLQRTEPSTVFNY
                     LPVKVGDTYNDTHGSAIIKSLYATGFFDDVRVETADGQLLLTVIERPTIGSLNITGAK
                     MLQNDAIKKNLESFGLAQSQYFNQATLNQAVAGLKEEYLGRGKLNIQITPKVTKLARN
                     RVDIDITIDEGKSAKITDIEFEGNQVYSDRKLMRQMSLTEGGIWTWLTRSNQFNEQKF
                     AQDMEKVTDFYQNNGYFDFRILDTDIQTNEDKTKQTIKITVHEGGRFRWGKVSIEGDT
                     NEVPKAELEKLLTMKPGKWYERQQMTAVLGEIQNRMGSAGYAYSEISVQPLPNAETKT
                     VDFVLHIEPGRKIYVNEIHITGNNKTRDEVVRRELRQMESAPYDTSKLQRSKERVELL
                     GYFDNVQFDAVPLAGTPDKVDLNMSLTERSTGSLDLSAGWVQDTGLVMSAGVSQDNLF
                     GTGKSAALRASRSKTTLNGSLSFTDPYFTADGVSLGYDVYGKAFDPRKASTSIKQYKT
                     TTAGAGIRMSVPVTEYDRVNFGLVAEHLTVNTYNKAPKHYADFIKKYGKTDGTDGSFK
                     GWLYKGTVGWGRNKTDSALWPTRGYLTGVNAEIALPGSKLQYYSATHNQTWFFPLSKT
                     FTLMFGGEVGIAGGYGKTKEIPFFENFYGGGLGSVRGYESGTLGPKVYDEYGEKISYG
                     GNKKANVSAELLFPMPGAKDARTVRLSLFADAGSVWDGKTYDDNSSSATGGRVQNIYG
                     AGNTHKSTFTNELRYSAGGAVTWLSPLGPMKFSYAYPLKKKPEDEIQRFQFQLGTTF"
     gene            8820..9320
                     /locus_tag="WIX18_000199"
     CDS             8820..9320
                     /locus_tag="WIX18_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HEZ5237362.1"
                     /translation="MTRLTRAFAAALIGLCCTAGAHADTFQKIGFINTERIYLESKQA
                     RKIQKTLDSEFSARQDELQKLQREGLDLERQLAEGKLRNAKKAQAEEKWRGLVAAFRK
                     KQAQFEEDYNLRRNEEFASLQQNANRVIVKIAKQEGYDVILQNVIYVNTQYDVTDSVI
                     KEMNAR"
     gene            9353..10399
                     /gene="lpxD"
                     /locus_tag="WIX18_000200"
     CDS             9353..10399
                     /gene="lpxD"
                     /locus_tag="WIX18_000200"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HEZ5237363.1"
                     /translation="MIPATYTLSQITARLGGEWRGEDISVTAVRPLADAQAEHISFLA
                     NPKYKAEVHDSSAGAVIVSAKAADGFEGRNLIVADDPYLYFAKVARLFSPVVKARGGI
                     HPTAVVEPSATVPASCEIGANAYIGANTVLGEGCRILANAVVQHDCKLGDEVVLHPNA
                     VVYYGCTLGRRVEIHSGAVIGADGFGLAFAGDSWFKIPQTGAVTLGDDVEIGSNTNID
                     RGAMSDTTVGNGTKIDNQVQIGHNCKIGSHTVIAAKTGISGSVTIGSYCIIGGGVGTV
                     GHIEIADKTTIGGGTSVTHSITESGKHLAGIFPMSTHKEWARNAVYIHRLSEMNKRLK
                     TLEQQLSDAGQDSK"
     gene            10433..10882
                     /gene="fabZ"
                     /locus_tag="WIX18_000201"
     CDS             10433..10882
                     /gene="fabZ"
                     /locus_tag="WIX18_000201"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HEZ5237364.1"
                     /translation="MDVQLPIEAKDIQKLIPHRYPFLQLDRITAFEPMKTLTAIKNVS
                     INEPQFQGHFPDLPVMPGVLIIEAMAQACGTLAILSEGGRKENEFFFFAGIDEARFKR
                     QVIPGDQLVFEVELLTSRRGIGKFNAVAKVDGQVAVEAIIMCAKRVV"
     gene            11089..11769
                     /locus_tag="WIX18_000202"
     CDS             11089..11769
                     /locus_tag="WIX18_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HEZ5237365.1"
                     /translation="MERYKNAVGEDKAAELYLLNLSLSRELFHVVSIFEIVLRNKIDI
                     CLQQAFKDRNWLYNSIQPQTNPALKYQGCFLRNGTKESAELIKVALSKIQNNSGGKFD
                     HNQLVAGLGFGFWRYLFAGGKDAQFDATGKVLMKVFPKKPKSTPSVQYNQKWIFRELS
                     NINKFRNRLAHHEPICFKGAIKDTNYARNIHQSIFELLNYMDVDTASVFSHFSDQVIA
                     VCDEIDKL"
     gene            11812..12588
                     /gene="lpxA"
                     /locus_tag="WIX18_000203"
     CDS             11812..12588
                     /gene="lpxA"
                     /locus_tag="WIX18_000203"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HEZ5237366.1"
                     /translation="MTLIHPTAVIDPKAELDSSVKVGAYTVIGPNVQIGANTEIGPHA
                     VINGHTSIGENNRIFQFASLGEIPQDKKYRDEPTKLIIGNGNTIREFTTFNLGTVTGI
                     GETRIGDDNWIMAYCHLAHDCVVGNHTIFANNASLAGHVTIGDYVVLGGYTLVFQFCR
                     IGDYAMTAFAAGVHKDVPPYFMASGYRAEPAGLNSEGMRRNGFTAEQISAVKDVYKTL
                     YHRGIPFEEAKADILRHAETQAELAVFRDFFAQSARGIIR"
     gene            12946..14337
                     /locus_tag="WIX18_000204"
     CDS             12946..14337
                     /locus_tag="WIX18_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEZ5237367.1"
                     /translation="MQVFLDNPKAFFETVSGWVWGPVMLMLLVGTGILLTVLLKGLQF
                     TMLGYALKQAFVPPKKHKSGEGHEGDISHFAALMTALSATIGTGNIAGVATAVVTGGP
                     GAVFWMWMTAIFGMATKYGEGVLAVKYRVNNSKGEMSGGPMYYIEKGLGKNWKWMALA
                     FALFGTFASFGIGSSVQSNSVAQAVQTSFGIEPAYTGITLTVLTAVVVLGGIKGIAKA
                     ASFIVPAMAVFYVLGGLSIIAINSDALMPAVKLIFSDAFSAQAVAGGAIGTVIRYGVA
                     RGVFSNEAGMGSAPIAAAAAKTDHPVRQALVSMTGTFLDTIVVCSITGIVLVMGLLGA
                     GGEFVKPEVSGAALTTVTFQKMLPGIGGWIVTIGLIFFAYSTILGWCYYGEKCAVYVF
                     GEKFAGLYRVGYVSSVMLGTVLSLDLVWLASDTFNGLMALPNLIALLLMAKVIVNETR
                     DFKQKITNGELPH"
     gene            14416..15672
                     /locus_tag="WIX18_000205"
     CDS             14416..15672
                     /locus_tag="WIX18_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid dehydrogenase"
                     /protein_id="HEZ5237368.1"
                     /translation="MKVLVLGAGVAGVSSAWYLAEAGHEVTVIDRAKGVAMETSFANA
                     GQLSYGYTTPWAAPGIPTKALKWLFKSHPPLLFRPDGSLYQIEWLWRMLQNCTAAHYQ
                     TNKERMVRISEYSREMFRRFEAQTGMNFEERKKGTLQIFRQTKEVEAAEQDIAVLERY
                     GVPYRRLKPEECAEFEPALARVTAKIAGGLHLPADATGDCHLFTENLYKLCQEKGVQF
                     HFNQTISRIDHNGLRIKAVETETGRFEADAVVCALGCFSRTVLAQLDLDLPIYPVKGY
                     SLTLPVTNSDGAPVSTVLDESYKVAITRFDNRIRVGGMAELSGYEIKLPEKRRETLAL
                     VVNDLFPEGGDLSQALFWSGLRPMTPDSTPLIGRTRFENLFLNTGHGTLGWTMSLGSA
                     KLTADIVSGKDTEIRSDDLSLSRYQA"
     gene            15853..16662
                     /gene="zupT"
                     /locus_tag="WIX18_000206"
     CDS             15853..16662
                     /gene="zupT"
                     /locus_tag="WIX18_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HEZ5237369.1"
                     /translation="MPDFSMSNLAVAFSITLAAGLFTVLGSGLVMFSKTPNPRVLSFG
                     LAFAGGAMVYVSLTEIFSKSSEAFAEIYDKDHAFAAATMAFLAGMGGIALIDRLVPNP
                     HETLDAQDPSFQESKRRHIARVGMMAAFAITAHNFPEGLATFFATLENPAVGMPLALA
                     IAIHNIPEGISIAAPVYFATRSRKKTVWACLLSGLAEPLGAALGYLVLQPFLSPAVFG
                     SVFGVIAGVMVFLALDELLPAAKRYSDGHETVYGLTMGMAVIAVSLVLFHF"
     gene            16759..19596
                     /locus_tag="WIX18_000207"
     CDS             16759..19596
                     /locus_tag="WIX18_000207"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEZ5237370.1"
                     /translation="MLDKYSPAEIESKHYQNWEEQGYFQPDMDLTKPSFSIQLPPPNV
                     TGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVVERQLAAQNVSRH
                     DLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAETVTEVFVRLY
                     EQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPLADNPAEAVIVATTRP
                     ETLLGDVAVAVNPEDERYTHLIGKELILPLTGRTIPVIADEYVEKDFGTGCVKITPAH
                     DFNDYEVGKRHDTRLVNVFDLEAKVLANAEVFNFKGEAQPSFALPEKYAGLDRFAARK
                     QMVADLQEQGFLVEIKAHTLMTPKGDRTGSVIEPMLTSQWFVAMSATPNGGEPDSEFK
                     GLSLADKAKKAVDSGAVRFIPENWVNTYNQWMNNIQDWCISRQLWWGHQIPAWYDNEG
                     NVYVARNQEEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAFLPSNV
                     LVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVIDPVDL
                     IDGIDLEKLLVKRTTGLRKPETAPKVEEASRKLFPEGIPSMGADALRFTMASYASLGR
                     SVNFDFKRAEGYRNFCNKIWNATNFVLMNTENQDCGYGATATEPRGYSFPDMWIVDRL
                     NQTIEQVTQAYETYRFDLAAETLYSFMWNDYCDWYLELAKVQLQTGCASRQRATRHTL
                     LRVLEAALRLLHPIIPFITEELWQTVAPMCDAKTADSIMLARFPEADGGDIVQTAFEQ
                     MTVLQDLIGAVRNLRGEMGIQPNVKAPLFVESTDDLADYLKYLPMMTRLIEAQQVAAL
                     PESEDAPVAVCNGARLMLKVEIDKAAETARLSKEAEKLQKALDKLNAKLSKPGYTEKA
                     PAHLVEKDKADLAELEDKMAKVQNQLAKLKD"
     gene            19738..19929
                     /locus_tag="WIX18_000208"
     CDS             19738..19929
                     /locus_tag="WIX18_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237371.1"
                     /translation="MLIHYTWHCIGTDENIHSDAKVEYLQDGSFRGDAILKIDDDGNI
                     LAYRVVGSGKWRFENNACA"
     gene            complement(19926..20846)
                     /gene="oxyR"
                     /locus_tag="WIX18_000209"
     CDS             complement(19926..20846)
                     /gene="oxyR"
                     /locus_tag="WIX18_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator OxyR"
                     /protein_id="HEZ5237372.1"
                     /translation="MTLTELRYIVAVAQERHFGRAARRCFVSQPTLSIAIKKLEEELA
                     VSLFDRSSNDIITTEAGERIVAQARKVLEEAELIRHLANEEQNELEGAFKLGLIFTVA
                     PYLLPKLIVSLRRTAPKMPLMLEENYTHTLTESLKRGDVDAIIVAEPFQEPGIVTEPL
                     YDEPFFVIVPKGHSFEELDAVSPRMLGEEQVLLLTEGNCMRDQVLSSCSELAAKQRIQ
                     GLTNTLQGSSINTIRHMVASGLAISVLPATALTENDHMLFSIIPFEGTPPSRRVVLAY
                     RRNFVRPKALSAMKAAIMQSQLHGVSFIRD"
     gene            complement(20850..21113)
                     /gene="minE"
                     /locus_tag="WIX18_000210"
     CDS             complement(20850..21113)
                     /gene="minE"
                     /locus_tag="WIX18_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HEZ5237373.1"
                     /translation="MSLIEFLFGRKQKTATVARDRLQIIIAQERAQEGQAPDYLPTLR
                     KELMEVLSKYVNVSLDNIRISQEKQDGMDVLELNITLPEQKKV"
     gene            complement(21117..21932)
                     /gene="minD"
                     /locus_tag="WIX18_000211"
     CDS             complement(21117..21932)
                     /gene="minD"
                     /locus_tag="WIX18_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HEZ5237374.1"
                     /translation="MAKIIVVTSGKGGVGKTTTSASIATGLALRGYKTAVIDFDVGLR
                     NLDLIMGCERRVVYDLINVIQGEATLNQALIKDKNCENLFILPASQTRDKDALTREGV
                     EKVMQELSGKKMGFEYIICDSPAGIEQGALMALYFADEAIVTTNPEVSSVRDSDRILG
                     ILQSKSHKAEQGGSVKEHLLITRYSPERVAKGEMLSVQDICDILHIPLLGVIPESQNV
                     LQASNSGEPVIHQDSVAASEAYKDVIARLLGENREMRFLEAEKKSFFKRLFGG"
     gene            complement(21960..22673)
                     /gene="minC"
                     /locus_tag="WIX18_000212"
     CDS             complement(21960..22673)
                     /gene="minC"
                     /locus_tag="WIX18_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HEZ5237375.1"
                     /translation="MMVYIMNAFDIKSTKMDVLSISLHTSDLFDLEDVLVKLGKKFQE
                     SGVVPFVLDVQEFDYPESLDLAALVSLFSRHGMQILGLKHSNERWAAAAMKYHLLFCL
                     SHSENVKELGQVEVQNTEDGQKARKTVLITSPVRTGQQVYAEDGDLIVTGAVSQGAEL
                     IADGNIHIYAPMRGRALAGAKGDTSARIFIHSMQAELVSVAGIYRNFEQDLPNHLHKQ
                     PVQILLQDNRLVISAIGSE"
     gene            complement(22820..23188)
                     /gene="rplQ"
                     /locus_tag="WIX18_000213"
     CDS             complement(22820..23188)
                     /gene="rplQ"
                     /locus_tag="WIX18_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEZ5237376.1"
                     /translation="MRHRNGNRKLNRTSSHRAAMLRNMANSLLTHETIVTTLPKAKEL
                     RRVVEPLITLGKKPSLANRRLAFDRTRDRDVVVKLFGDLGPRFTARNGGYVRVLKYGF
                     RKGDNAPLALVELVDKPAAE"
     gene            complement(23212..24198)
                     /gene="rpoA"
                     /locus_tag="WIX18_000214"
     CDS             complement(23212..24198)
                     /gene="rpoA"
                     /locus_tag="WIX18_000214"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEZ5237377.1"
                     /translation="MQNSTTEFLKPRQIDVNTFSATRAKVSMQPFERGFGHTLGNALR
                     RILLSSMNGFAPTEVAIAGVLHEYSTVDGIQEDVVDILLNIKGIVFKLHGRSQVQLVL
                     KKSGSGVVSAGDIELPHDVEILNPGHVICHLADNGQIEMEIKVEQGRGYQSVSGRQVV
                     RDENRQIGAIQLDASFSPISRVSFEVEPARVEQRTDLDKLVLDIETDGSIDPEEAVRS
                     AARILIDQMSIFADLQGTPVEEVEEKAPPIDPVLLRPVDDLELTVRSANCLKAEDIYY
                     IGDLIQRTETELLKTPNLGRKSLNEIKEVLASKGLTLGSKLEAWPPVGLEKP"
     gene            complement(24224..24844)
                     /gene="rpsD"
                     /locus_tag="WIX18_000215"
     CDS             complement(24224..24844)
                     /gene="rpsD"
                     /locus_tag="WIX18_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004282443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEZ5237378.1"
                     /translation="MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHGAK
                     KPRLSDYGLQLREKQKIRRIYGVLERQFRRYFAEADRRKGSTGELLLQLLESRLDNVV
                     YRMGFGSTRAEARQLVSHKAIVVNGQVVNIPSFQVKAGDVVSVREKAKKQVRIQEALG
                     LATQIGLPGWVSVDADKLEGVFKNMPDRSELTGDINEQLVVEFYSK"
     gene            complement(24864..25259)
                     /gene="rpsK"
                     /locus_tag="WIX18_000216"
     CDS             complement(24864..25259)
                     /gene="rpsK"
                     /locus_tag="WIX18_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEZ5237379.1"
                     /translation="MAKANTASRVRKKVRKTVSEGIVHVHASFNNTIITITDRQGNAL
                     SWATSGGAGFKGSRKSTPFAAQVAAEAAGKVAQEYGVKNLEVRIKGPGPGRESSVRAL
                     NALGFKITSITDVTPLPHNGCRPPKKRRI"
     gene            complement(25279..25641)
                     /gene="rpsM"
                     /locus_tag="WIX18_000217"
     CDS             complement(25279..25641)
                     /gene="rpsM"
                     /locus_tag="WIX18_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEZ5237380.1"
                     /translation="MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPDTK
                     AKDLDETQLDALRDQVAKYEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRT
                     RTNARTRKGPRKAIAGKK"
     gene            complement(25707..25820)
                     /gene="rpmJ"
                     /locus_tag="WIX18_000218"
     CDS             complement(25707..25820)
                     /gene="rpmJ"
                     /locus_tag="WIX18_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006232360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HEZ5237381.1"
                     /translation="MRVQPSVKKICRNCKIIRRNRVVRVICTDLRHKQRQG"
     gene            complement(25841..26059)
                     /gene="infA"
                     /locus_tag="WIX18_000219"
     CDS             complement(25841..26059)
                     /gene="infA"
                     /locus_tag="WIX18_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEZ5237382.1"
                     /translation="MAKEDTIQMQGEILETLPNATFKVKLENDHIVLGHISGKMRMHY
                     IRISPGDKVTVELTPYDLTRARIVFRAR"
     gene            complement(26064..27374)
                     /gene="secY"
                     /locus_tag="WIX18_000220"
     CDS             complement(26064..27374)
                     /gene="secY"
                     /locus_tag="WIX18_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HEZ5237383.1"
                     /translation="MANQQTSSGSSKFGDLKKRLLFLFGALIVFRIGAHIPVPGVDAV
                     ALAKLYESAGNGILGILNMFSGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKAL
                     KKEGEAGRKVITKYTRYGTVLLAILQSLGVASFVFQQGIVVTSSFEFHVSTVVSLVTG
                     TMFLMWLGEQITERGIGNGISLIITAGIASGIPSGIAKLVTLTNQGSMSMLTALFIVF
                     GALLLIYLVVYFESAQRKIPIHYAKRQFNGRAGSQNTHMPFKLNMAGVIPPIFASSII
                     LFPSTLLGWFGSADTNSVLHKIAGLLQHGQLLYMALFAATVIFFCYFYTALVFSPKEM
                     AENLKKSGAFVPGIRPGEQTSRYLEKVVLRLTLFGALYITTICLIPEFLTTVLNVPFY
                     LGGTSLLILVVVTMDFSTQINSYRLTQQYDKLMTRSEMKSFSRK"
     gene            complement(27386..27820)
                     /gene="rplO"
                     /locus_tag="WIX18_000221"
     CDS             complement(27386..27820)
                     /gene="rplO"
                     /locus_tag="WIX18_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HEZ5237384.1"
                     /translation="MFLNTIQPAVGATHAGRRVGRGIGSGLGKTGGRGHKGQKSRSGG
                     FHKVGFEGGQMPLQRRLPKRGFKSLTASANAQLRLSELESIAVNEIDILVLKQAGLIA
                     STVSNVKVIASGEISKAVALKGIKVTKGARAAIEAVGGKIEM"
     gene            complement(27822..28007)
                     /gene="rpmD"
                     /locus_tag="WIX18_000222"
     CDS             complement(27822..28007)
                     /gene="rpmD"
                     /locus_tag="WIX18_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HEZ5237385.1"
                     /translation="MAEQKKIRVTLVKSLIGTIESHRACARGLGLRRREHTVEVLDTP
                     ENRGMINKISYLLKVES"
     gene            complement(28000..28518)
                     /gene="rpsE"
                     /locus_tag="WIX18_000223"
     CDS             complement(28000..28518)
                     /gene="rpsE"
                     /locus_tag="WIX18_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HEZ5237386.1"
                     /translation="MAKHEIEERGDGLIEKMVAVNRVTKVVKGGRIMAFSALTVVGDG
                     DGRIGMGKGKSKEVPVAVQKAMDQARRSMIKVPLKNGTIHHEVIGRHGATKVFMQPAK
                     EGSGVKAGGPMRLVFDAMGIHNISAKVHGSTNPYNIVRATLDGLSKLHTPADIAAKRG
                     LTVEDILGVNHG"
     gene            complement(28537..28890)
                     /gene="rplR"
                     /locus_tag="WIX18_000224"
     CDS             complement(28537..28890)
                     /gene="rplR"
                     /locus_tag="WIX18_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HEZ5237387.1"
                     /translation="MDKHTTRLRRARKTRARIADLKMVRLCVFRSNNHIYAQVISAEG
                     DKVLAQASTLEAEVRGSLKSGSNVEAAAIVGKRIAEKAKAAGVEKVAFDRSGFQYHGR
                     VKALAEAARENGLSF"
     gene            complement(28904..29437)
                     /gene="rplF"
                     /locus_tag="WIX18_000225"
     CDS             complement(28904..29437)
                     /gene="rplF"
                     /locus_tag="WIX18_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HEZ5237388.1"
                     /translation="MSRVAKNPVTVPAGVEVKFGTEALVIKGKNGELSFPLHSDVAIE
                     FNDGKLAFVANNSSKQANAMSGTARALVSNMVKGVSEGFEKRLQLIGVGYRAQAQGKI
                     LNLSLGFSHPIVYEMPEGVSVQTPSQTEIVLTGSDKQVVGQVAAEIRAFRAPEPYKGK
                     GVRYVGEVVVMKEAKKK"
     gene            complement(29451..29843)
                     /gene="rpsH"
                     /locus_tag="WIX18_000226"
     CDS             complement(29451..29843)
                     /gene="rpsH"
                     /locus_tag="WIX18_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEZ5237389.1"
                     /translation="MSMHDPISDMLTRIRNAQRANKAAVAMPSSKLKCAIAKVLKEEG
                     YIEDFAVSSDVKSILEIQLKYYAGRPVIEQIKRVSRPGLRIYKASSEIPSVMNGLGIA
                     IVSTSKGVMTDRKARSQGVGGELLCIVA"
     gene            complement(29859..30164)
                     /gene="rpsN"
                     /locus_tag="WIX18_000227"
     CDS             complement(29859..30164)
                     /gene="rpsN"
                     /locus_tag="WIX18_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HEZ5237390.1"
                     /translation="MAKKALINRNLKRQALAKKYAAKRAAIKAVINDSNATEEERFEA
                     RLRFQSIPRNAAPVRQRRRCALTGRPRGTFRKFGLGRIKIREIAMRGEIPGVVKASW"
     gene            complement(30167..30706)
                     /gene="rplE"
                     /locus_tag="WIX18_000228"
     CDS             complement(30167..30706)
                     /gene="rplE"
                     /locus_tag="WIX18_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEZ5237391.1"
                     /translation="MARLREFYKETVVPELVKQFGYKSVMEVPRIEKITLNMGVGEAV
                     ADKKVMEHAVSDLEKIAGQKPVVTVARKSIAGFKIRDNYPVGCKVTLRRDQMFEFLDR
                     LITIALPRVRDFRGVSGKSFDGRGNYNMGVREQIIFPEIEYDKIDALRGLNITITTTA
                     KTDEEAKALLSLFKFPFKG"
     gene            complement(30716..31039)
                     /gene="rplX"
                     /locus_tag="WIX18_000229"
     CDS             complement(30716..31039)
                     /gene="rplX"
                     /locus_tag="WIX18_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEZ5237392.1"
                     /translation="MNKIIKGDRVVVIAGKDKGKQGQVVRVLGDKVVVEGVNVVKRHQ
                     KPNPMRGIEGGIITKEMPLDISNIAILNPETNKADRVGIKLIENEGKVKRVRFFKSNG
                     SIIGA"
     gene            complement(31051..31419)
                     /gene="rplN"
                     /locus_tag="WIX18_000230"
     CDS             complement(31051..31419)
                     /gene="rplN"
                     /locus_tag="WIX18_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009124801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEZ5237393.1"
                     /translation="MIQMQTILDVADNSGARRVMCIKVLGGSKRRYASVGDIIKVAVK
                     DAAPRGRVKKGDVYNAVVVRTAKGVRRPDGALIKFDNNAAVLLNNKLEPLGTRIFGPV
                     TRELRTERFMKIVSLAPEVL"
     gene            complement(31641..31904)
                     /gene="rpsQ"
                     /locus_tag="WIX18_000231"
     CDS             complement(31641..31904)
                     /gene="rpsQ"
                     /locus_tag="WIX18_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEZ5237394.1"
                     /translation="MSETKNVRTLQGKVVSDKMDKTVTVLVERKVKHPLYGKIIRLST
                     KIHAHDENNQYGIGDVVVISESRPLSKTKSWVVSELVEKARSI"
     gene            complement(31904..32095)
                     /gene="rpmC"
                     /locus_tag="WIX18_000232"
     CDS             complement(31904..32095)
                     /gene="rpmC"
                     /locus_tag="WIX18_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HEZ5237395.1"
                     /translation="MKANELKDKSVEQLNADLLDLLKAQFGLRMQNATGQLGKPSELK
                     RVRRDIARIKTVLTEKGAK"
     gene            complement(32095..32511)
                     /gene="rplP"
                     /locus_tag="WIX18_000233"
     CDS             complement(32095..32511)
                     /gene="rplP"
                     /locus_tag="WIX18_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HEZ5237396.1"
                     /translation="MLQPTRLKYRKQQKGRNTGIATRGNKVSFGEFGLKAVGRGRLTA
                     RQIEAARRAMTRHIKRGGRIWIRVFPDKPITEKPIQVRMGGGKGNVEYYIAEIKPGKV
                     LYEMDGVPEELAREAFELAAAKLPIPTTFVVRQVGQ"
     gene            complement(32495..33187)
                     /gene="rpsC"
                     /locus_tag="WIX18_000234"
     CDS             complement(32495..33187)
                     /gene="rpsC"
                     /locus_tag="WIX18_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HEZ5237397.1"
                     /translation="MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLR
                     QKLANASVGRVVIERPAKSARITIHSARPGVVIGKKGEDIEVLKRDLQVLMGVPVHVN
                     IEEIRRPELDAQIIADGIAQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGA
                     DIARSEWYREGRVPLHTLRANVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHESK
                     QRKAGRRNAAAN"
     gene            complement(33197..33526)
                     /gene="rplV"
                     /locus_tag="WIX18_000235"
     CDS             complement(33197..33526)
                     /gene="rplV"
                     /locus_tag="WIX18_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HEZ5237398.1"
                     /translation="MRVNAQHKNARISAQKARLVADLIRGKDVAQALNILAFSPKKGA
                     ELIKKVLESAIANAEHNNGADIDELKVVTIFVDKGPSLKRFQARAKGRGNRIEKQTCH
                     INVTVGN"
     gene            complement(33535..33813)
                     /gene="rpsS"
                     /locus_tag="WIX18_000236"
     CDS             complement(33535..33813)
                     /gene="rpsS"
                     /locus_tag="WIX18_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HEZ5237399.1"
                     /translation="MARSLKKGPYVDLHLLKKVDAARASNDKRPIKTWSRRSTILPDF
                     IGLTIAVHNGRTHVPVFISDNMVGHKLGEFSLTRTFKGHLADKKAKKK"
     gene            complement(33820..34653)
                     /gene="rplB"
                     /locus_tag="WIX18_000237"
     CDS             complement(33820..34653)
                     /gene="rplB"
                     /locus_tag="WIX18_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEZ5237400.1"
                     /translation="MAIVKMKPTSAGRRGMVRVVTEGLHKGAPYAPLLEKKNSTAGRN
                     NNGHITTRHKGGGHKHHYRVVDFKRNKDGIPAKVERIEYDPNRTAFIALLCYADGERR
                     YIIAPRGIQAGAVLVSGAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGA
                     SAVLLAKEGAYAQVRLRSGEVRKINVNCRATIGEVGNEEQSLKKIGKAGANRWRGIRP
                     TVRGVVMNPVDHPHGGGEGRTGEAREPVSPWGTPAKGYRTRNNKRTDNMIVRRRYSNK
                     G"
     gene            complement(34659..34973)
                     /gene="rplW"
                     /locus_tag="WIX18_000238"
     CDS             complement(34659..34973)
                     /gene="rplW"
                     /locus_tag="WIX18_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HEZ5237401.1"
                     /translation="MNQQRLTQVILAPIVSEKSNVLAEKRNQMTFKVLANAAKPEIKA
                     AVELLFGVQVASVTTVTTKGKTKRFGRTLGRRSDVKKAYVSLAAGQELDLEAAAAAAD
                     KE"
     gene            complement(34970..35590)
                     /gene="rplD"
                     /locus_tag="WIX18_000239"
     CDS             complement(34970..35590)
                     /gene="rplD"
                     /locus_tag="WIX18_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HEZ5237402.1"
                     /translation="MELKVIDAKGQVSGSLSVSDALFAREYNEALVHQLVNAYLANAR
                     SGNRAQKTRAEVKHSTKKPWRQKGTGRARSGMTSSPLWRKGGRAFPNKPDENFTQKVN
                     RKMYRAGMATILSQLTRDERLFAIEALTAETPKTKVFAEQVKNLGLEQVLFVTKQLDE
                     NVYLASRNLPNVLVLEAQQVDPYSLLRYKKVIITKDAVAQLEEQWV"
     gene            complement(35590..36234)
                     /gene="rplC"
                     /locus_tag="WIX18_000240"
     CDS             complement(35590..36234)
                     /gene="rplC"
                     /locus_tag="WIX18_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HEZ5237403.1"
                     /translation="MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTD
                     GYTAVQVTFGQKKANRVNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVS
                     MFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFP
                     GKRMAGQYGNTKATVQKLEVVRVDAERQLLLVKGAVPGAVNSDVVVRPSVKVGA"
BASE COUNT         9717 a         9868 c         8230 g         8682 t
ORIGIN      
        1 cgcgcactgc cttgccgccc gcccgaaaag ttgcacaaac aaccgttcat atatatcatg
       61 acgaaaaaac gccggtgtag ctcagtcggt agagcagcgc attcgtaacg cgaaggtcgg
      121 gggttcgatt cccttctccg gcaccaatac caagcacaga ccctcccttc ctcgggaagc
      181 ctgtgctttt tcacatttcc gcttcagacg gcacaaccga tatgaacacc tcgcaacgca
      241 accgcctcgt cagccgctgg ctcaactcct acgaacgcta ccgctaccgc cgcctcatcc
      301 acgccgtccg gctcggcggg gccgtcctgt tcgccaccgc ctccgcccgg ctgctccacc
      361 tccaacacgg cgagtggata gggatgaccg tcttcgtcgt cctcggcatg ctccagtttc
      421 aaggggcgat ttactccaag gcggtggaac gtatgctcgg cacggtcatc gggctgggcg
      481 cgggtttggg cgttttatgg ctgaaccagc attatttcca cggcaacctc ctcttctacc
      541 tcaccgtcgg cacggcaagc gcactggccg gctgggcggc ggtcggcaaa aacggctacg
      601 tccctatgct ggcggggctg acgatgtgca tgctcatcgg cgacaacggc agcgaatggt
      661 tcgacagcgg cctgatgcgc gccatgaacg tcctcatcgg cgcggccatc gccattgccg
      721 ccgccaaact gctgccgctg aaatccacac tgatgtggcg tttcatgctt gccgacaacc
      781 tgaccgactg cagcaaaatg attgccgaaa tcagcaacgg caggcgtatg acgcgcgaac
      841 gtttggagca gaatatggtt aaaatgcgcc aaatcaacgc acgcatggtc aaaagccgca
      901 gccacctcgc cgccacatcg ggcgaaagcc gcatcagccc cgccatgatg gaagccatgc
      961 agcacgccca ccgtaaaatt gtcaacacca ccgagctgct cctgaccact gccgccaagc
     1021 tgcaatctcc caaactcaac ggcagcgaaa tccggctgct cgaccgccac ttcacactgc
     1081 tccaaaccga cctgcaacaa accgtcgccc ttatcaacgg cagacacgcc cgccgcatcc
     1141 gcatcgacac cgccatcaac cccgaactgg aagccctcgc cgaacacctc cactaccaat
     1201 ggcagggctt cctctggctc agcaccaata tgcgtcagga aatttccgcc ctcgtcatcc
     1261 tgctgcaacg cacccgccgc aaatggctgg atgcccacga acgccaacac ctgcgccaaa
     1321 gcctgcttga aacacgggaa cacggctgac ggtcggacac gatgccgtct gaaacgcctg
     1381 ccgcttcaga cggcatctcc aatcctcctg ccttgtcgtc atgcccgaat aacggtacta
     1441 ttcgcagtta acagttttca tgccgtctga aaggtttgaa gcgcgtttca gacggctgcc
     1501 cgcccacctt atcccaccga aagaacaata tgatcaacga tattcaaaaa acagccgaag
     1561 gcaaaatgca gcgttcggtc gaagtactga aagaaaatct ggcgaaagtg cgtaccggcc
     1621 gcgcgcatac cggcctgctc gaccaagtgg aagtcgaata ctggggcagc atggtccccg
     1681 tcagccaagt tgccaacgta acgcttctgg acgcgcgcac catcggcgtg aaaccgtttg
     1741 agggcaatat ggcggccaaa gtcgagaaag ccatccgcga ttcaaacttg gggctgaacc
     1801 cggcagctgt cggcgacctg atccgcgtgc cgatgcccat gctgaccgag gaacgccgca
     1861 aagacctgat taaagtcgta cgcggcgaag cggaagaagg ccgcgtctct atccgcaacg
     1921 tgcgccgcga tgccaacgac cacatcaaaa aactcctcaa agacaaagaa atttccgaag
     1981 acgaggcacg tcgcggcgaa gaagcggttc aaaaactgac cgacaaatac attaccgaag
     2041 ccgacaaact cctgactgcc aaagaagaag atttgatggc aatttaacct gcacggttcg
     2101 gcgttcagac ggcatttgaa tgccgaaccg cgaaaggcag acatgaaaag cagcacgcag
     2161 gccgttttgg aacacaccgc cattcccaag catatcgccg tgattatgga cggcaacggc
     2221 cgttgggcga aaaaacgttt cctcccgcgc ataatgggac acaaacgcgg tttggacgca
     2281 ttggaaaata tggtgaagca ttgcgccaaa ctgggtgtgc aatatctgac cgtgtttgcc
     2341 ttttcaaccg aaaactggcg ccgccccgaa gacgaagttt cgttcctgat ggggctgttt
     2401 ttacaggctt tgcaaaaaca ggtacgccgt ctgcacgaaa acaatatgcg cctaaaaata
     2461 ctgggcagcc gcgaacgctt taatcggcag attctgcaag gcatcgaaga ggcggaagcc
     2521 ttgacggcaa acaataccgg cctgaccctg agcattgccg ccgattacgg cggacgttgg
     2581 gatattttgc aggcggcaaa caaactgatt gccgaaggcg tatccgagat tacggaagac
     2641 acgctggcga aacacttgat gctgggcgat gcaccggaac cggatttgtt catccgcacc
     2701 ggcggcgaaa cgcgcatcag caatttcctg ctctggcaga tggcatatgc agaactgtat
     2761 ttcaccgata ttttgtggcc cgattttgac ggcaaggctt tggacgatgc cgtcgcttcg
     2821 ttccaaaaac gcgaacggcg gttcggacgc acctccgagc aactgcctat cgaacagcaa
     2881 aggaactgaa tatgctgaaa caacgggtga taactgctat gtggctgctg ccgctgatgc
     2941 tgggcatgct gttttacgcg ccgcaatggt tgtgggctgc attttgcgga ctgattgccc
     3001 tgattgcctt gtgggaatat gcccgtatga gcggtttgtg caaaattaaa accaaccatt
     3061 acctcgccgc aaccttggtt ttcggcgtgg ttgcctatgc gggcggctgg atgctgccta
     3121 atttggtttg gtatgttgtt ttggcatttt ggctcgccat catgccttta tggttgagat
     3181 tcaaatggag gctcaacggc ggttggcagg tttatgccgt cggttggctt ctggtcatgc
     3241 cgttttggtt cgcgctcgta tccctgcgcc cgcatcccga tgatgccctg ccgctgctcg
     3301 ccgtgatagg tctggtctgg gttgccgacg tttgcgcgta tttcagcggc aaggcgttcg
     3361 gtaaacacaa aatcgcaccg gcaatcagcc ctggcaaaag ctgggaaggc gcaatcggcg
     3421 gcgcggtttg cgtggccgtg tacatgaccg ccgtacgaag tgccggctgg ctggcattcg
     3481 atacaggctg gttcgatacc gtgttaatcg gtttggtgtt gaccgttgtc agcgtatgcg
     3541 gcgacctttt ggaaagctgg ctcaagcgcg cggcaggcat caaagacagc agcaacctgc
     3601 tgcccggaca cggcggcgtg ttcgaccgta ccgacagcct gattgccgtt atcagcgtct
     3661 atgcggcgat gatgtcggtt ttaaattgat tctatgccgt ctgaaaacgc ttcagacggc
     3721 atccggtata aagttatccc cattatgaca ccacaagtcc tgaccatatt aggcagtacc
     3781 ggcagcatag gcgaaagcac gctggacgtt gtctcccgcc accccgaaaa attccgcgta
     3841 ttcgcgctgg cagggcataa gcaggtcgag aaactggcgg tgcaatgccg gacgttccgc
     3901 cccgaatatg ccgtcgttgc cgatgccgaa cacgccgccc ggcttgaagc tttgttgaaa
     3961 ggcgacggca cggcgacgca ggttttacac ggcgcgcagg cattggttga cgttgcctct
     4021 gccgacgaag tcagcggtgt catgtgcgcc atcgtcgggg cggtggggct gccttccgcg
     4081 ctcgcagcgg cgcaaaaagg caaaaccatt tatctggcga acaaagagac gctggtggtt
     4141 tccggcgcgt tgtttatgga aaccgcccgt gcaaacggcg cggcagtgct gcccgtcgac
     4201 agcgaacaca acgccatttt ccaagttttg ccgcgcgatt acgccggccg tctgaacgaa
     4261 cacggcatcg cttcgattat cctgaccgct tccggcggcc cgtttctgac cgccgattta
     4321 aacacgttcg acagcattac gcccgcccaa gcggtcaaac accccaattg gagcatgggg
     4381 cgcaaaatct ccgtcgattc cgccaccatg atgaacaaag gtttggagct gattgaagcg
     4441 cattggctgt tcaactgtcc gcctgacaag ctcgaagtcg tcatccatcc gcaatccgtg
     4501 atacacagca tggtgcgcta ccgcgacggc tccgtgttgg cgcaactggg caatcccgat
     4561 atgcgtacgc ccattgctta ttgtttgggt ttgcccgagc gcatcgattc gggtgtcggc
     4621 gacctggatt tcgacgcatt gtccgcgctg accttccaaa agcccgactt tgaccgcttc
     4681 ccctgcctga agctcgccta tgaagccatg aacgcaggcg gagccgcgcc ctgcgtattg
     4741 aacgccgcca acgaagccgc cgtcgccgcc tttttggacg gacagattaa gtttaccgac
     4801 attgccaaaa ccgtcgccca ttgtctttca caagactttt cagacggcat aggcgacata
     4861 ggggggctct tggcgcaaga tgcccggaca cgcgcacaag cgcgggcatt tatcggcaca
     4921 ctgcgctgat gccgtctgaa caccgttatc aaaggaaaac catttgcaca cccttctagc
     4981 ttttatcttc gccatcctga ttttggtcag cctgcacgag ttcggacact acatcgttgc
     5041 cagattgtgc ggcgtcaaag tcgtacgctt ttccgtcggc ttcggcaaac cgtttttcac
     5101 ccgaaagcgc ggcgacaccg aatggtgcct cgccccgatt ccgttgggcg gttacgtcaa
     5161 aatggtcgat acgcgcgaag gcgaagtatc agaagccgat ttaccctacg cttttgacaa
     5221 acaacacccc gccaaacgca tcgccatcgt cgccgccggc ccgctgacca atctcgcact
     5281 ggcggttttg ctgtacggac tgagcttttc cttcggcgta accgaactgc gcccctatgt
     5341 cggcacagtc gaacccgaca ccattgccgc ccgcgccggc ttccaaagcg gcgacaaaat
     5401 acaatccgtc aacggcacac ccgttgcaga ttggggcagc gcgcaaaccg aaatcgtcct
     5461 caacctcgaa gccggcaaag tcgccgtcgg cgttcagacg gcatcaggcg cgcaaaccgt
     5521 ccgcaccatc gatgccgcag gcacgccgga agccggtaaa atcgcaaaaa accaaggcta
     5581 catcggactg atgcccttta aaatcacaac cgttgccggt ggcgtggaaa aaggcagccc
     5641 cgccgaaaaa gcaggcctga aaccgggcga caggctgact gccgccgacg gcaaacccat
     5701 tacctcatgg caagaatggg caaacctgac ccgccaaagc cccggcaaaa aaatcaccct
     5761 gaactacgaa cgcgccggac aaacccatac cgccgacatc cgccccgata ctgtcgaaca
     5821 gcccgaccac accctgatcg ggcgcgtcgg cctccgtccg cagccggaca gggcgtggga
     5881 cgcgcaaatc cgccgcagct accgtccgtc tgttgtccgc gcattcggca tgggctggga
     5941 aaaaaccgtt tcccactcgt ggacaaccct caaatttttc ggcaaactaa tcagcggcaa
     6001 cgcctccgtc agccatattt ccgggccgct gaccattgcc gacattgccg gacagtccgc
     6061 cgaactcggc ttgcaaagtt atttggaatt tttggcactg gtcagcatca gcctcggcgt
     6121 gctgaaccta ctgcccgtcc ccgttttgga cggcggccac ctcgtgtttt atactgccga
     6181 atggatacgc ggcaaacctt tgggcgaacg cgtccaaaac atcggtttgc gcttcgggct
     6241 tgccctcatg atgctgatga tggcggtcgc cttcttcaac gacgttaccc ggctgctcgg
     6301 ttagatttta cgtttcggaa tgccgtctga aaccgcattc cgcaccacaa ggaactgaca
     6361 atgaaactga aacagattgc ttccgcactg atggtcttgg gcatatcgcc tttggcactt
     6421 gccgacttca ccatccaaga catccgcgtc gaaggcttgc agcgtaccga gccgagtacc
     6481 gtattcaact acctgcccgt caaagtcggc gacacctaca acgacacaca cggcagtgcc
     6541 atcatcaaaa gcctgtacgc caccggtttc tttgacgacg tacgcgtcga aactgcggac
     6601 gggcagctcc tgctgaccgt tatcgaacgc cccaccatcg gctcgctcaa catcaccggc
     6661 gcaaaaatgc tgcaaaacga cgccattaag aaaaacctcg aatcgttcgg gctggcgcag
     6721 tcgcaatact ttaatcaggc gacactcaat caggcagtcg ccggcctgaa agaagaatac
     6781 ctcgggcgcg gcaaactcaa tatccaaatc acgcccaaag taaccaaact cgcccgcaac
     6841 cgcgtcgaca tcgacatcac gattgacgag ggcaaatccg ccaaaatcac cgacatcgaa
     6901 tttgaaggca accaagtcta ttccgaccgc aaactgatgc ggcagatgtc gctgaccgaa
     6961 ggcggcattt ggacatggct gacacgaagc aaccaattca acgagcagaa atttgcccaa
     7021 gacatggaaa aagtaaccga cttctaccag aacaacggct acttcgattt ccgcatcctc
     7081 gataccgaca tccaaaccaa cgaagacaaa accaagcaga ccatcaaaat caccgtccac
     7141 gaaggcggac gtttccgttg gggcaaagtc tccatcgaag gcgacaccaa cgaagtcccc
     7201 aaagccgaac tggaaaaact gctgaccatg aagcccggca aatggtacga acgccagcag
     7261 atgaccgccg ttttgggtga gattcagaac cgcatgggct cggcaggcta cgcatacagc
     7321 gaaatcagcg tacagccgct gccaaacgcc gaaaccaaaa ccgtcgattt cgtcctgcac
     7381 atcgaaccgg gccggaaaat ctacgtcaac gaaatccaca tcaccggcaa caacaaaacc
     7441 cgcgacgaag tcgtgcgccg cgaattgcgc caaatggaat ccgcgcctta cgacacctcc
     7501 aagctgcaac gctccaaaga gcgcgtcgag cttttgggct acttcgacaa cgtacagttt
     7561 gatgccgtcc cgcttgccgg cacacccgac aaagtcgatt tgaacatgag cctgaccgaa
     7621 cgttccaccg gctcgctcga cttgagcgcg ggctgggtac aggataccgg cctggtcatg
     7681 tccgcaggcg tttcccaaga caacctgttc ggtacgggca agtcggccgc cctgcgcgcc
     7741 tcacgaagca aaaccacgct caacggctcg ctgtcgttta ccgacccgta cttcacggca
     7801 gacggggtca gcctaggcta cgatgtttac ggaaaagcct tcgacccgcg caaagcatcg
     7861 accagcatca aacaatataa aaccaccacg gcaggcgcag gcatccgcat gagcgtgcct
     7921 gttaccgaat acgaccgcgt gaatttcggt ttggtggcag aacacctgac cgtcaacacc
     7981 tacaacaaag cgcccaaaca ctatgccgac tttatcaaga aatacggcaa aaccgacggc
     8041 acagacggca gcttcaaagg ctggctgtac aaaggtaccg tcggctgggg gcgcaacaaa
     8101 accgacagcg cgttatggcc gacgcgcggc tacctgacgg gcgtgaacgc tgaaatcgcc
     8161 ctgcccggca gcaaactgca atactactcc gccacccaca accaaacctg gttcttcccc
     8221 ttaagcaaaa ccttcacgct gatgttcggc ggcgaagtcg gcattgcggg cggctacggc
     8281 aaaaccaaag aaatcccctt ctttgaaaac ttctacggcg gcggcctggg ttcggtgcgc
     8341 ggatacgaaa gcggcacgct cggtccgaaa gtgtatgacg aatacggcga aaaaatcagc
     8401 tacggcggca acaaaaaagc caacgtctcc gccgagctgc tcttcccgat gcctggcgcg
     8461 aaagacgcgc gcaccgtccg cctgagcctg tttgccgacg caggcagcgt gtgggacggc
     8521 aaaacctacg acgacaacag cagttccgcg accggcggca gggttcaaaa catttacggc
     8581 gccggcaata cccataaatc cacctttacc aacgaattgc gctattccgc cggcggcgcg
     8641 gttacctggc tctcgccttt aggcccgatg aaattcagct acgcctaccc gctgaagaaa
     8701 aaaccggaag acgaaatcca acgcttccaa ttccaactcg gcacgacgtt ctaatcccgc
     8761 aaatgccgtc tgaagccctt cagacggcat ttcgcggcaa cattcgaagg agttttacca
     8821 tgacccgttt gacccgcgcg tttgccgcgg ctctgatcgg tttgtgctgc accgcaggcg
     8881 cgcacgccga caccttccaa aaaatcggct ttatcaacac cgagcgcatc tacctcgaat
     8941 ccaagcaggc gcgcaagatt caaaaaacgc tggacagcga attttccgcc cgtcaggacg
     9001 aattgcaaaa actgcaacgc gaaggtctgg atttggaaag gcagcttgcc gaaggcaaac
     9061 tcagaaacgc aaaaaaggcg caagccgaag aaaaatggcg cgggctggtc gcagcgttcc
     9121 gcaaaaaaca ggcgcagttt gaagaagact acaacctccg ccgcaacgaa gagtttgcct
     9181 ccctccagca aaacgccaac cgcgtcatcg tcaaaatcgc caaacaggaa ggttacgatg
     9241 tcattttgca gaacgtgatt tacgtcaaca cccaatacga cgttaccgac agcgtcatta
     9301 aagaaatgaa cgcccgctga ccctttcaga cggcataccg aacaggaaaa ccatgattcc
     9361 ggccacctac accctgtccc aaatcaccgc gcggctcggc ggcgaatggc gcggcgagga
     9421 catttccgtt accgccgtgc gcccgctcgc agacgcgcag gcggaacaca tcagcttcct
     9481 tgccaatccg aaatacaaag ccgaagtcca cgacagcagc gcgggcgcgg tcatcgtttc
     9541 cgccaaagcg gcagacggat ttgaagggcg caacctgatt gtcgccgacg acccctatct
     9601 ctatttcgcc aaagtcgccc gcctgttttc acccgtcgtc aaagcgcgcg gcggcatcca
     9661 tccgaccgcc gtcgtcgaac cgagtgccac cgttcccgca agctgcgaaa tcggcgcgaa
     9721 cgcctacatc ggcgcaaaca ccgtgctcgg cgaaggctgc cgcatcttgg caaacgccgt
     9781 cgtccaacac gattgcaaac tgggcgacga agtcgtcctg catcccaacg ccgtcgttta
     9841 ttacggctgc acactgggca gacgcgtcga aatccacagc ggcgcggtca tcggcgcgga
     9901 cggtttcgga ctcgcttttg ccggcgattc atggtttaaa atcccgcaaa ccggcgcggt
     9961 aacgctgggc gacgacgtag aaatcggctc gaacaccaac atcgaccgcg gcgcgatgag
    10021 cgacaccacc gtcggcaacg gcaccaaaat cgacaaccaa gtccaaatcg gacacaactg
    10081 caaaatcggt tcgcacaccg tcatcgccgc caaaaccggc atctcaggca gcgtaaccat
    10141 aggcagctac tgcatcatcg gcggcggcgt cggtacggtc ggacacatcg aaatcgccga
    10201 caaaaccacc atcggcggcg gcacgtccgt cacccacagc attaccgaaa gcggcaaaca
    10261 cctcgccggc atcttcccga tgtccaccca taaagaatgg gcgcgcaacg ctgtttacat
    10321 ccaccgctta agcgaaatga acaaacggct caaaacactg gagcagcagc tttcagatgc
    10381 cggtcaagac agcaaataac caaaccgact ttattcaagg aatacgacag acatggacgt
    10441 acaactcccc atcgaagcca aagacatcca aaaactcatc ccccaccgct atccgtttct
    10501 ccagctcgac cgcatcaccg ccttcgagcc gatgaaaacc ctgaccgcga ttaaaaacgt
    10561 cagcataaac gagccccagt tccaaggcca ctttcccgac ctgcccgtga tgcccggcgt
    10621 actcatcatc gaagcgatgg cgcaagcctg cggcacgttg gcgattttga gcgaaggcgg
    10681 gcgcaaagaa aacgaattct tcttcttcgc cggcatagac gaagcccgtt tcaaacgcca
    10741 agtcatcccc ggcgaccaac tcgtctttga agtcgagctg ctgaccagcc ggcgcggcat
    10801 cggcaaattc aacgccgttg ccaaagtgga cgggcaagtc gccgtcgaag ccatcatcat
    10861 gtgtgccaaa cgcgtggttt gagcgttcgg aaaaaggtcg tctgaaagtt tcagacgacc
    10921 taataaaaag aaaacccacc ggtttaggtt tattcaaacc cagggacacg gtggggatta
    10981 gttttaccta actgtatcaa atatagtttg aaacgtcaat ttaaaaataa agaatcaggt
    11041 gttagcgtgg attataagga atgctgtagt attttttctg atttcagaat ggaacggtat
    11101 aaaaatgccg ttggggaaga caaagcagct gaattgtatt tattgaattt atctttatca
    11161 agagaacttt ttcatgttgt ttcaatattt gagattgttt taagaaacaa aattgacatt
    11221 tgccttcagc aggcgtttaa agacagaaac tggttatata acagcataca gccacagacg
    11281 aatcccgcat taaaatatca aggttgcttt ttaagaaatg gcacgaaaga atctgctgaa
    11341 ttaatcaagg ttgcattatc taaaatacaa aataatagcg ggggaaagtt tgaccacaac
    11401 caattggttg caggactagg attcggtttt tggcggtatc tgtttgcagg agggaaagat
    11461 gcccaatttg atgctacagg gaaagtattg atgaaagttt ttccaaaaaa gcccaaatct
    11521 acaccaagtg tgcaatataa ccaaaaatgg atttttcgag aactttccaa tattaacaaa
    11581 ttccgtaatc gtttggcaca tcacgagccg atttgtttta aaggtgcaat aaaagatacc
    11641 aactacgcta gaaatattca ccaatctatt tttgaactgc ttaattacat ggatgtagat
    11701 actgcttcag tatttagcca ttttagcgat caagtgattg cggtctgcga tgaaatcgac
    11761 aaactgtaat tttctattat ttgtcttaac aagcagcgga gtattcaaaa catgaccctc
    11821 atccacccga ccgccgtcat cgaccccaaa gccgaactcg actccagcgt caaagtcggc
    11881 gcgtacaccg tcatcggccc caacgtccaa atcggcgcga ataccgaaat cggcccgcac
    11941 gccgtcatca acggccacac cagcatcggc gaaaacaacc gcattttcca atttgccagc
    12001 ctcggcgaaa tcccgcagga caaaaaatac cgcgacgagc cgaccaagct gattatcggc
    12061 aacggcaaca ccatccgcga attcaccacc tttaatttag gcacggtaac cggcatcggc
    12121 gaaacccgta tcggcgacga caactggatt atggcgtact gccacctcgc gcacgactgc
    12181 gtggtcggca accacaccat cttcgccaac aacgcctcgc ttgccggaca cgttaccatc
    12241 ggcgactacg tcgttttggg cggctacacg ctggttttcc aattctgccg catcggcgac
    12301 tacgccatga ccgcgtttgc cgcaggcgta cacaaagacg tgccgcccta ctttatggca
    12361 tcgggctacc gcgccgaacc ggcggggctc aacagcgaag gcatgcgccg caacggtttt
    12421 accgcagagc agatttccgc cgtcaaagac gtgtacaaaa ccctctacca tcgcggcatt
    12481 ccgtttgaag aagccaaggc agacattctc cgccacgccg aaacccaagc cgagcttgcc
    12541 gtattccgag actttttcgc acaatcggca cgcggcatca tccgctgacc gtaccctttt
    12601 gatgccgtct gaaaccccga cagcgtttca gacggcatcg gtttttttaa agcggtatat
    12661 tgtttgatcg atgcatcatt ttgtagattt cagaagtatg gcagtcggca gcattgatga
    12721 tttctgccgc ccgccacatc cccattcgga catttcattg tgacctccgc cgctgctttt
    12781 aaagaattgc aaacaatttc cgcagcttga accggcctgt tttcggcgaa aaaaaccaaa
    12841 agtatttttc aaaagaacat attgtcttat tggatattct gtgctgaaat tactggacac
    12901 tacaaaagtg gtgttttaaa aataaaacag acaaaggaga aagccatgca agtgttttta
    12961 gacaatccca aagccttttt tgaaaccgtc agcggctggg tttggggacc tgttatgttg
    13021 atgctgctgg tcggcacggg tattttgctg actgttttat taaaaggttt gcagttcacg
    13081 atgttgggtt atgcgctgaa acaggcgttt gtgccgccaa agaagcataa aagcggcgaa
    13141 ggccacgaag gcgatatttc ccatttcgcg gcgttgatga ccgcgctgtc cgccaccatc
    13201 ggtacgggta acatcgccgg cgtggcgact gcggtggtaa ccggcggccc gggcgcggta
    13261 ttttggatgt ggatgaccgc cattttcggc atggccacca aatacggcga aggcgtgttg
    13321 gcggtgaaat accgcgtcaa caattccaaa ggcgaaatgt ccggcggccc gatgtattac
    13381 atcgaaaaag gcttgggcaa aaactggaaa tggatggcgt tggcgttcgc tttattcggc
    13441 acattcgctt ccttcggtat cggcagctcg gtgcagtcca actcggttgc acaggcggtg
    13501 caaaccagct tcggtatcga acctgcctat accggcatta cgttgaccgt tctgactgcc
    13561 gttgtcgttt taggtggtat taaaggcatc gccaaagccg cttctttcat cgtgcctgct
    13621 atggcggtgt tttatgtgtt gggcggtctt tccattatcg cgattaattc cgatgcactg
    13681 atgcctgccg tcaagctaat tttctccgat gcgttcagcg cgcaggcagt ggcgggcggc
    13741 gctatcggta cggtcatccg ctacggcgtg gcgcgcggcg tgttctccaa tgaggcgggt
    13801 atgggttctg cgcctattgc cgccgcagcc gcgaaaaccg accatcccgt ccgtcaggcc
    13861 ttggtttcta tgaccggtac gtttttggat accatcgtcg tttgctcgat taccggcatc
    13921 gtgttggtaa tgggactgct cggcgcgggc ggcgagtttg tcaaacctga agtgagcggc
    13981 gcggcactga caaccgtcac attccaaaaa atgctgcccg gcatcggcgg ctggattgtt
    14041 accatcggcc tgattttctt tgcctactca accattttgg gctggtgcta ttacggcgaa
    14101 aaatgcgcgg tgtatgtttt cggcgagaaa tttgccggtt tgtaccgcgt gggttatgtt
    14161 tcttccgtta tgctgggtac cgtgttgagc cttgatttgg tgtggctggc ttcggacaca
    14221 ttcaacggct tgatggcatt gcccaacctg attgcacttt tattgatggc gaaagtcatc
    14281 gtcaatgaaa cgcgcgactt caaacaaaaa atcacaaacg gcgaattgcc gcattaatat
    14341 ccgaggccgt ctgaatccga atattcagac ggcacggcat attaagtctg ttttgaaaaa
    14401 gtcggaggga gaaacatgaa agtgcttgtt ttaggtgcgg gtgttgccgg cgtgtcttcc
    14461 gcgtggtatc tggcagaggc cggacatgaa gtaacggtca tcgaccgcgc caagggtgtg
    14521 gcgatggaaa ccagttttgc caatgcaggc cagctttctt acggctatac cacgccttgg
    14581 gctgcacccg gtattccgac caaagcactg aaatggctgt ttaaaagcca tccgcctttg
    14641 ctgtttcgcc ccgacggcag cctgtatcaa atcgaatggc tgtggcggat gctgcaaaac
    14701 tgcacggcag cgcactatca aaccaataaa gagcgcatgg tcaggatttc cgaatatagc
    14761 cgtgaaatgt tccgccgttt tgaagcgcaa accggcatga attttgagga acgcaaaaaa
    14821 gggacgttgc agattttccg ccaaaccaaa gaagtcgaag cggcagaaca agacattgcc
    14881 gttttggaac gctacggcgt gccgtaccgc cgtctgaaac ccgaagaatg tgcagaattt
    14941 gagcctgcgc tggcacgcgt taccgccaaa attgccggcg gcctgcacct gcctgcagat
    15001 gcgaccggcg actgccacct cttcactgaa aacctataca aattgtgtca ggaaaagggc
    15061 gtacagtttc atttcaacca aaccatcagc cgcatcgacc ataacgggct gcgcatcaaa
    15121 gccgttgaaa ccgaaacagg gcggtttgaa gcagatgccg ttgtctgtgc gctcggctgc
    15181 ttcagtagga ctgtgttggc gcagttagac ctcgatctgc cgatttatcc cgtcaaaggc
    15241 tattccttga ccctgccggt caccaattca gacggcgcgc cggtgtccac cgttttggat
    15301 gaaagctaca aagtcgccat cacgcgcttt gacaacagaa tccgcgtcgg cggcatggca
    15361 gaattgtcgg gctacgaaat caaactgccc gaaaaacgcc gcgaaacctt ggctttggtc
    15421 gtcaacgatt tgttcccgga aggcggcgat ttgagccaag cattgttctg gagcggcctc
    15481 agaccgatga cgcccgacag cacgccgtta atcggccgca cccgctttga aaacttattc
    15541 ttgaatacag gccacggcac tttgggctgg accatgtcgc tgggttcggc aaaattaacc
    15601 gccgatatcg tgagcggcaa agacaccgaa atccgaagcg acgatttgag cctgtcgcgc
    15661 tatcaggctt aagctggaaa gcgataaggt ttagcgacat ttcaaattta aaggccgtct
    15721 gaaaatcatt tttcagacgg ccttttgttt caaaattcgg gtatccaatc aataaaataa
    15781 ataataacta ttatcatacg cattaaaaag tgttagtctg aacctgtccc agcttttagc
    15841 gcaggttttc ccatgcccga tttttcgatg tccaatttgg ccgttgcctt ttccattacg
    15901 ttggctgccg gtttgtttac cgtattaggc agcggcttgg tgatgttttc caaaacgccc
    15961 aatccgcgcg tgttgtcgtt tggtttggca tttgccggcg gtgcgatggt gtatgtttcc
    16021 ctgacggaga ttttcagtaa gtccagcgag gcgttcgctg aaatttatga taaagaccac
    16081 gcgtttgcgg cggcgaccat ggcatttttg gcagggatgg gcggcattgc gctgattgac
    16141 cgtctggtgc cgaacccgca tgaaacttta gacgcgcaag acccgtcgtt tcaagaaagc
    16201 aaacgccgcc atatcgcgcg agtcggcatg atggcggcgt ttgcgattac tgcgcacaat
    16261 ttccccgaag gcttggcgac gttttttgcc acattggaaa atccagcagt cgggatgcct
    16321 ttggccttgg cgattgccat ccataatatt ccggagggca tttccatcgc cgcgccggtt
    16381 tattttgcca cccgcagccg taagaaaacg gtgtgggcgt gtctgctatc cggcttggcc
    16441 gagccgttgg gggcggcttt gggctatttg gttttgcagc cgtttttgtc gcctgccgtg
    16501 tttggttcgg tattcggcgt gatagccggt gtgatggtgt ttttggcgtt ggacgagctg
    16561 ctgccggctg ccaaacgcta ttcagacggc catgaaaccg tttacggcct gacaatgggc
    16621 atggcggtga ttgccgtcag cctggtattg ttccattttt aaaacctgta tgccaaaggc
    16681 cgtctgaaat gattcagacg gcctttttgc gttataatcc gcacatcaaa aataacctta
    16741 atttcacaaa gttccatcat gttagacaaa tactcccccg ccgaaatcga atccaaacat
    16801 tatcaaaact gggaagagca gggctatttc caacctgata tggatttgac caaaccgtct
    16861 ttttccatcc aactgccgcc gcccaatgta accggcacgc tgcacatggg tcatgccttc
    16921 aaccaaacca ttatggacgg cctgacccgc tactaccgta tgaaaggctg caacaccgcc
    16981 tggattcccg gcaccgacca cgcgggcatc gccacgcaaa tcgtggtcga gcgtcagctt
    17041 gccgcgcaaa acgtgtcccg tcatgacttg ggtcgtgaaa aattcttgga aaaagtgtgg
    17101 gaatggaaag aagtttccgg cggcacgatt acgcagcaga tgcgccgtgt gggctgttct
    17161 gccgactgga cgcgcgagta tttcacaatg gacgatgtac gcgccgaaac cgtaaccgaa
    17221 gtgttcgtac gcctgtatga acagggcttg atttatcgcg gcaaacgctt ggtgaactgg
    17281 gatccggtat tgggtaccgc agtgtctgat ttggaagtgg aaagcgtgga agaacaaggc
    17341 tctatgtggc acatccgcta tccgctggcg gacaatcctg ccgaagccgt catcgtcgcc
    17401 accacccgtc ccgaaacgct gttgggcgac gttgccgttg ccgtcaatcc cgaagacgaa
    17461 cgttataccc acttaatcgg caaagaatta atcctgccgc tgaccggccg caccattccc
    17521 gtgattgccg acgaatacgt tgaaaaagac ttcggcaccg gctgcgtgaa aatcacgcct
    17581 gcgcacgact tcaacgacta cgaagtcggc aaacgccacg atacgcgctt ggttaatgtg
    17641 ttcgacttgg aagccaaagt attggcaaac gccgaagtgt tcaacttcaa aggcgaagcg
    17701 caaccaagct ttgccctgcc tgaaaaatac gcaggcttgg accgctttgc cgcgcgcaaa
    17761 caaatggttg ccgatttgca ggaacaaggt ttcttggtcg aaatcaaagc gcacacgctg
    17821 atgacgccga aaggcgaccg taccggttcc gtgattgagc cgatgctgac cagccaatgg
    17881 tttgtcgcca tgtccgccac gccaaacggc ggcgagcctg acagcgaatt caaaggctta
    17941 agccttgctg acaaagccaa aaaagccgtc gacagcggcg cggtgcgctt tatccccgaa
    18001 aactgggtca acacctacaa ccaatggatg aacaacatcc aagactggtg catctcgcgc
    18061 caactgtggt gggggcatca aatccctgca tggtacgaca acgaaggcaa tgtgtacgtt
    18121 gcccgcaatc aggaagaagc cgaaaaacaa gccggcaaaa caggcttgac ccgagaagaa
    18181 gacgtattgg acacatggtt ctcctccgca ctcgtgccgt tctccacgct cggctggccg
    18241 tctgaaaccg acgaactcaa agccttcctg ccgtccaacg tcttggttac cggctacgaa
    18301 atcatcttct tctgggtggc gcgcatgatt atgatgacca cccactttac cggcaaagta
    18361 ccgtttaaag acgtgtacat ccacggcatc gtgcgcgacc acgaaggcaa aaaaatgtcc
    18421 aaatccgaag gcaacgtcat tgaccctgtg gatttgatcg acggcatcga cttggaaaaa
    18481 ctgctggtga aacgtaccac cggtctgcgc aaacccgaaa ccgcgccgaa agtggaagaa
    18541 gcctcgagaa aactcttccc cgaaggcatt ccgagtatgg gcgcggacgc tttgcgcttc
    18601 accatggcga gctacgccag cttggggcgc agcgtgaact tcgacttcaa acgcgccgaa
    18661 ggctaccgca acttctgcaa caaaatctgg aacgccacca acttcgtctt gatgaacacc
    18721 gaaaaccaag actgcggcta cggcgcaacc gccactgagc cgcgcggcta ttccttcccc
    18781 gatatgtgga ttgtagaccg tctgaatcag accatcgagc aagtaacgca agcctacgaa
    18841 acctaccgct ttgatttggc agcggaaacc ctgtacagct tcatgtggaa cgactattgc
    18901 gactggtatt tggaacttgc caaagtgcag cttcaaaccg gctgcgccag ccgccaacgc
    18961 gccacacgcc ataccttgtt gcgcgtactc gaagccgccc tgcgcctgct gcacccgatt
    19021 atcccgttca tcaccgaaga attgtggcaa accgtcgctc ctatgtgcga cgcgaaaacc
    19081 gccgacagca tcatgctcgc ccgcttcccc gaagccgacg gcggcgatat tgttcagacg
    19141 gcattcgagc aaatgaccgt gttgcaggat ttgattggcg cagtccgcaa cctgcgcggc
    19201 gaaatgggca tccagcccaa tgtgaaagcc ccgctgtttg tcgaaagcac ggacgacttg
    19261 gcggactacc tcaaatacct gccgatgatg acccgcctga tcgaagcaca gcaagtcgcc
    19321 gccctacccg aaagcgaaga cgcgcccgtc gccgtctgca acggcgcgcg cctgatgttg
    19381 aaagtcgaaa tcgacaaagc tgcggaaacc gcccgtttga gcaaagaagc cgagaagctg
    19441 caaaaagcct tggacaaact caacgccaaa ctctccaaac ccggctacac cgaaaaagcc
    19501 cctgcgcatc tggtggaaaa agacaaagcc gatttggcgg aattggaaga caaaatggca
    19561 aaagttcaaa atcagttggc gaagttgaaa gactgatttg attgaataaa caaggccgtc
    19621 tgaaaaatgt ttttcagacg gcctctttta tagtggatta acaaaaatca ggacaaggcg
    19681 acgaagccgc agacagtata aatagtacgg caaggcgagg caacgccgta ctggtttttg
    19741 ttaatccact atacatggca ttgtatcggc actgatgaaa acattcacag tgatgcaaaa
    19801 gtcgaatatc ttcaggacgg cagtttccgt ggcgatgcta tactcaaaat cgatgatgac
    19861 ggcaatatct tggcataccg tgttgtcggc tcagggaaat ggcgttttga aaacaatgcc
    19921 tgcgcctagt cgcggataaa acttaccccg tgaagctgcg actgcataat cgccgccttc
    19981 atcgccgaca acgccttcgg acggacaaaa ttgcggcggt acgccaatac gacccgtcgg
    20041 cttggcggcg taccctcaaa cggaataatg ctgaacagca tatgatcgtt ctcggtcagt
    20101 gcggttgccg gcaacacgct gattgccaaa ccgctggcga ccatatggcg gattgtattg
    20161 atcgagctgc cctgcaatgt attggtcaac ccctgtatgc gttgtttcgc cgccaattcg
    20221 gaacagcttg agagtacctg atcccgcata cagttgcctt ccgtcagcag caaaacctgc
    20281 tcctcaccca gcatccgggg cgaaacggca tccagttcct caaatgaatg ccctttcggg
    20341 acaatcacga aaaacggttc gtcatacaag ggttcggtaa caatgcccgg ctcttgaaac
    20401 ggttcggcaa cgataatcgc atcaacgtcc ccgcgtttga gcgactcggt caaagtatgc
    20461 gtgtaattct cttccaacat caaaggcatt ttcggtgcag tacggcgcaa cgagacaatc
    20521 agtttcggca gcaggtacgg cgcaaccgta aaaatcagcc cgagtttgaa cgcaccctcc
    20581 agctcgtttt gttcttcatt tgccaaatgc ctgataagct ctgcctcttc caacacctta
    20641 cgcgcctgtg caacgatacg ttcccccgcc tcggtcgtaa taatatcgtt gctgctccgg
    20701 tcaaacaaag agacggcaag ctcttcttcc aatttcttaa tggcaataga caaagtgggc
    20761 tgactgacaa aacaacgccg cgccgccctg ccgaaatgac gttcttgggc gactgcgacg
    20821 atgtaccgca attcggttaa ggtcatgtcc tatacctttt tctgttccgg caaagtaatg
    20881 ttcaactcaa gcacatccat accatcctgt ttttcctggg aaatacggat attgtctaat
    20941 gaaacattca catatttgga caggacttcc atcaactctt tacgtaaagt cggcaggtaa
    21001 tccggagcct gaccttcttg ggcgcgctct tgggcaatga tgatttgaag gcggtcgcgg
    21061 gcaacggttg ccgttttctg ctttctgccg aataaaaatt cgattaatga catatcttat
    21121 cctccaaaca gacgtttgaa gaagcttttt ttctcagctt ccaagaaacg catttcacgg
    21181 ttctcgccca aaagacgggc aataacgtcc ttatatgcct cggaagccgc cacgctgtcc
    21241 tgatggatga ccggttctcc ggaattggat gcctgcaaga cgttttggga ttcaggaatc
    21301 acacccagca aaggaatatg cagaatatcg caaatatcct gtacagacag catttcgcct
    21361 tttgccacac gttcgggaga ataacgcgta atcaacagat gttctttaac cgaaccgcct
    21421 tgctctgcct tatgggattt gctttgcaaa attcccaaaa tcctgtcgga gtcacgcaca
    21481 ctggaaacct caggattggt cgttacaatg gcttcatcag caaaatacaa cgccatcaat
    21541 gcaccctgct caataccggc aggagagtcg caaataatat actcaaagcc cattttcttg
    21601 ccggacagct cctgcatcac tttttctacg ccctcgcgtg tcaaagcgtc tttatcccga
    21661 gtctgggaag ccggcaaaat aaacaggttt tcacaatttt tatctttaat caaagcttgg
    21721 ttgagcgtcg cctccccctg aatgacattg atcaggtcat aaacgacacg acgctcgcaa
    21781 cccataatga ggtcgaggtt acgcaaaccc acatcaaaat caattaccgc agttttatat
    21841 ccgcgtaatg ccaaacctgt cgcaatactg gcactggtag tcgttttacc gacaccgccc
    21901 ttacctgaag ttactacaat aatttttgcc acaatatttc ctttttaaat atcaaacaat
    21961 tactctgagc caattgcact gataaccaat cggttatcct gcaacaatat ctgtaccggc
    22021 tgcttgtgca gatggttcgg caaatcctgt tcaaaattac ggtaaatacc cgccacagaa
    22081 accagttctg cctgcatgga gtggataaat atgcgggcag aagtatcacc cttggcaccg
    22141 gccaaagcac gccccctcat cggcgcataa atatgtatat tgccatccgc aatcaattcc
    22201 gccccctggc tgaccgcccc cgtaacaatc aaatcgccat cttcggcata aacctgctga
    22261 ccggtacgga caggggatgt aatcaatact gttttccttg ctttctgacc atcctccgtg
    22321 ttctgcacct caacctgacc cagttcttta acattttccg aatgagacag acaaaacagc
    22381 aaatgatact tcatagccgc agcagcccaa cgttcattag aatgcttcag acccaaaatt
    22441 tgcataccat gccttgaaaa caacgaaacc aatgcagcaa gatccaaaga ctcgggataa
    22501 tcaaactctt gaacatccag cacaaatgga acaacaccag actcttgaaa cttcttgccc
    22561 aatttgacca gcacatcttc caaatcaaac aagtctgacg tatgcaaaga tatagacaat
    22621 acgtccatct ttgtcgactt tatatcgaaa gcattcatta tataaaccat catagaattt
    22681 tttaatgatg taagtttacc gcgcaaacct tagctattca attaatattt taaacatgat
    22741 agccaatacc ctattaccta tcagatattg caaaaataac gccacctgct tttcggcaga
    22801 tggcgttata tgactaaaat tactcagcag ccggtttgtc aaccaattca accagtgcca
    22861 gaggtgcatt atcaccttta cggaatccgt atttcaacac ccgaacataa ccaccgttac
    22921 gagcagtaaa acgaggaccc aaatcgccaa acagttttac tacaacatca cggtcgcgag
    22981 tacggtcaaa tgccaaacgg cggtttgcca atgacggctt tttacccaat gtaatcaacg
    23041 gctctactac acggcgcaat tccttggcct taggcagagt tgttacaata gtttcgtgag
    23101 tcaataatga attcgccata ttacgcagca ttgcagcacg atgactgctg gtacggttta
    23161 atttgcgatt gccattacga tgacgcatat caattatcct ttaattcttc attaaggctt
    23221 ttccaagcct acaggtggcc atgcttccaa cttagaaccc agtgtcaaac ctttagatgc
    23281 caatacttcc ttaatctcat tcaaagattt acgtcccaaa ttcggcgttt taagaagctc
    23341 ggtttcagtg cgttgaatca aatcgccaat ataataaata tcctcagctt tcaaacaatt
    23401 agctgaacgt actgtcaatt ccagatcatc caccggacgc aaaagaacag ggtcgatagg
    23461 aggtgctttt tcttcaacct cctccacagg cgtaccctgc aaatcagcaa aaatagacat
    23521 ctgatcaatc aaaatacgtg ccgcactgcg tacagcttcc tcaggatcaa tagaaccgtc
    23581 ggtttcgata tccaaaacca acttatcaag atccgtccgc tgctctacac gtgcaggttc
    23641 aacctcaaag ctaacacggc tgatgggcga aaagctcgca tccaactgga ttgcaccaat
    23701 ctgacggttc tcatcacgaa ctacctgacg acctgaaaca gattgataac cacgaccttg
    23761 ctctacttta atttccatct caatttgacc gttatcagcc aaatgacaaa tgacatgacc
    23821 aggattcaga atttctacat catgcggcaa ctcaatatca ccggcagata cgacacctga
    23881 acctgatttc ttcaacacaa gttgaacttg gctacgacca tggagtttaa acacaatacc
    23941 tttaatattc agcaaaatgt caacaacatc ttcctgaata ccatcaacag tagaatattc
    24001 gtgtaataca ccggcaatag ctacttcagt aggagcaaaa ccattcatgg atgacagtaa
    24061 gatacggcgc aaagcattac ctaaggtatg accgaaacca cgttcaaatg gctgcataga
    24121 tacttttgca cgagttgcag aaaaagtatt tacatcaatt tgacgaggtt tcaaaaattc
    24181 ggttgtgcta ttctgcattt aactgtccct cactgagcta gcattattta gagtagaact
    24241 ctaccaccag ctgttcatta atatcaccgg tcaattccga gcgatccggc atgtttttga
    24301 acacaccctc aagtttatcc gcatctacag aaacccaacc cggcaagccg atttgagttg
    24361 ccaaacccaa tgcttcttga atacgtacct gttttttggc tttttcacga actgagacaa
    24421 catcaccagc tttcacttgg aaagaaggaa tattgacaac ttgtccattc acaactatcg
    24481 ccttatgaga aacaagctgt cttgcttcag ctcgggtaga accgaaaccc atacgataaa
    24541 cgacattatc caaacgagat tccagcaact gcaacagcaa ctcgccggta gaacctttac
    24601 gacgatcagc ttctgcgaaa taacgacgga actgacgttc taatacgcca taaatacggc
    24661 ggattttttg tttttcacgc aactgcaaac catagtctga caaacgcggt ttttttgcac
    24721 catgctgacc gggagcggaa tcaattttac atttagaatc caaagagcgg cgcgcactct
    24781 tcaaaaacaa atccgtacct tcgcgacgtg ccaacttaca tttagggcca atataacgtg
    24841 ccatgtttca aatcactcca atattaaata cgacgttttt taggcggacg gcaaccgtta
    24901 tgaggcaacg gggtaacgtc agtaatgctg gtaatcttga aaccaagagc attcaaagca
    24961 cgtacagagg attcgcgacc tggacctgga cctttaatac gaacctctaa atttttaacg
    25021 ccatactctt gggcaacttt accagctgct tctgctgcaa cttgtgctgc aaatggtgta
    25081 cttttacgag aacctttaaa accagcgccg ccagaggtag cccaagacaa cgcattgcct
    25141 tgacggtcag tgattgtaat gatggtattg ttgaaagatg catgaacgtg cacaataccc
    25201 tcactcacgg ttttacgtac ttttttacgt acacgtgaag ctgtgtttgc tttagccatt
    25261 aataaaattc cttaaaattt atttcttacc agcaatcgct ttacgcggac ctttgcgggt
    25321 acgcgcattt gtacgagtgc gttgaccgcg gcatggtaag ccgcgacgat gacggaagcc
    25381 acgatagcag cccatgtcca tcaatcgctt gatactcata gttacctcac gacgcaaatc
    25441 accttctact tcatacttgg caacttggtc acgcaaagca tctaattgag tctcgtccaa
    25501 atcttttgct ttagtatcag gcgcaatatt tgcagcctca caaatcaatt tagcacgagt
    25561 agcaccaata ccgtaaatag cctgaagacc aattacgatg tgtgcgttat tagggatatt
    25621 tacccctgca atacgagcca tattttttcc tttttagggc aaagtgtgtc actatatcac
    25681 agaatcacat taaaagaaat attccattaa ccttgacgct gtttgtgacg gagatcagta
    25741 caaattacac gaactacacg atttcgacga ataatcttgc aatttcggca aattttctta
    25801 acagatggtt gtacacgcat tttattttcc ttttattggt ttatcttgct ctgaaaacga
    25861 ttcgagccct agttagatca taaggtgtca gctctactgt gaccttatct cccggagaaa
    25921 tacgaatgta atgcatccgc atcttcccag aaatatgacc caatacaata tggtcattct
    25981 caagttttac tttaaatgtt gcattaggta aagtttcaag aatttcacct tgcatttgga
    26041 tagtatcttc tttcgccata attctatttc cgagaaaatg atttcatttc tgaacgagtc
    26101 attaacttat catactgttg agtaagccta tacgaattta tttgtgtact aaaatccatc
    26161 gttacaacaa ctagaatcaa caaagacgtg ccacccaaat aaaaaggtac atttaaaacc
    26221 gtagttaaga actctggaat taaacaaata gttgtaatat aaagagctcc aaacaatgtc
    26281 aaacgtaata caactttttc taaataccta gaggtctgct caccaggtct aatcccagga
    26341 acaaaagcac cactcttttt taaattctct gccatttctt tagggctaaa aaccaaagcc
    26401 gtataaaaat aacaaaagaa aataactgtc gctgcaaata aagccatata cagcaattga
    26461 ccgtgttgta acaatccagc tattttgtgc aaaacactat ttgtatcagc cgaaccaaac
    26521 caacctaaaa gagtagatgg aaatagaata atactggaag caaaaattgg gggaataaca
    26581 ccagccatat tcaacttgaa aggcatatgc gtattttgac tacccgccct accattaaac
    26641 tggcgttttg cataatgaat aggaatcttc cgctgtgcac tttcaaagta tacaaccaaa
    26701 taaattaata ataaggcacc aaatacaata aacaacgccg taagcatgct catagaacct
    26761 tggttcgtca gtgtaaccag ctttgcaata cccgaaggaa tacctgaagc aatacctgcc
    26821 gtaatgatta aagaaatacc gttcccgata cccctttcag taatttgctc cccaagccac
    26881 ataagaaaca tggttcccgt taccaaagaa actaccgtgg aaacatgaaa ctcaaatgaa
    26941 cttgttacaa caattccttg ctgaaatacg aaagatgcaa cacctagact ttgaagaatt
    27001 gctaacaaaa cagtaccata cctagtatat ttcgtaatta cctttctacc agcctcccct
    27061 tcttttttta aagccttcaa tgatggcaaa atttcagaag cgagctgtac aataatagaa
    27121 gctgaaatat atggcataat tcctattgca aatatactaa agcgctctaa cgacccaccg
    27181 gaaaacatat tcaatattcc caggatgccg tttccagcgc tttcgtataa tttagctaaa
    27241 gcaacagcat caactccagg tacgggtata tgggcaccaa ttcgaaaaac aatcaatgct
    27301 ccaaatagaa acaaaagacg tttcttaaga tctccaaatt tggatgaacc tgatgacgtt
    27361 tgttgattag ccacaatatt aaaccttaca tttcaatctt accaccaaca gcctcgatag
    27421 cagctctcgc acctttggta actttaatac ccttcaaagc aactgcctta gaaatttcac
    27481 cagaagcaat aactttaaca ttagagactg tagatgcaat cagacccgct tgctttaaga
    27541 ccaaaatatc aatctcatta acagcaattg attccagttc acttaaacga agctgtgcat
    27601 tagctgatgc tgttaaagat ttaaaacctc ttttagggag gcgtcgttgc aagggcattt
    27661 gaccaccctc gaaacccacc ttatgaaacc caccagaccg actcttttga cctttatgac
    27721 cacgaccacc cgttttgcca agaccactac caataccgcg tccaacacga cgaccagcat
    27781 gcgtagcacc aacagcaggt tgaattgtat tcaaaaacat atcaagactc cactttcaac
    27841 aagtagctga ttttattaat cataccacgg ttttcagggg tatctaaaac ctctaccgta
    27901 tgctcgcgac gacgcaaacc taaaccgcgt gcacatgcac gatgagattc aattgtacca
    27961 atcaggcttt taaccaatgt aaccctaatc tttttttgtt cagccatggt taactcccaa
    28021 aatgtcttcc actgtcaagc cacgtttggc tgcgatatca gcaggagtat gcaacttaga
    28081 caaaccatct aatgttgcac gtacgatatt atatgggtta gtagatccgt gcactttggc
    28141 ggagatatta tgaatgccca tagcatcaaa aaccaaacgc ataggtccac cggcttttac
    28201 gccactaccc tctttagcag gctgcataaa tactttagta gcaccatgtc gaccaataac
    28261 ctcatgatga atcgtaccat tttttaatgg taccttaatc atagagcgtc gtgcttgatc
    28321 catcgccttt tggactgcaa caggcacttc ttttgactta cctttaccca taccaatacg
    28381 accatctcca tcaccaacaa cagttagcgc agagaaagcc ataatgcgac cacctttaac
    28441 tactttggtt acacggttaa ctgcgaccat cttttcaatc agaccgtcac cgcgttcttc
    28501 aatttcatgt tttgccatct gaaagtctcc aaatatttag aagcttaaac cattttcacg
    28561 agcagcttca gccaaagcct tcacacgacc gtgatattgg aaacctgaac gatcaaaagc
    28621 aaccttttct acacctgctg ctttagcctt ctcagcgata cgtttaccaa ctattgcagc
    28681 tgcttcaaca ttgcttccag atttcagact accgcgcacc tcagcttcca atgtagaggc
    28741 ttgagccaat actttatcac cttcagcact aattacttga gcataaatat gattattgct
    28801 tcggaacaca cataatctta ccattttcaa gtccgcaata cgagcacggg ttttgcgtgc
    28861 acgacggagt cgggttgtat gtttatccat tagtgaacct caattatttt ttcttggctt
    28921 ctttcattac cactacttct cctacatagc gaacaccttt acctttataa ggctcaggag
    28981 cacggaacgc acgaatctca gcagcaactt gaccaacaac ttgtttatcc gagccggtta
    29041 aaacaatctc tgtttggcta ggagtttgaa cggagacacc ttcaggcatt tcatatacga
    29101 tcggatgaga aaaacccaaa gacagattca agattttacc ttgtgcttga gcacgataac
    29161 ccacacctat caattgcaat cttttctcaa aaccttctga aacaccttta accatattgc
    29221 tgactaatgc gcgagcagta ccagacattg catttgcttg tttactgctg ttattcgcaa
    29281 caaaagccaa tttgccatca ttaaattcaa tggctacatc agaatgcaaa ggaaaagaca
    29341 attcaccgtt cttaccctta ataactaatg cctctgttcc aaattttact tctacaccag
    29401 cgggaacagt cactgggttt tttgcgacac gtgacatttc ttttcctcca ctaggctaca
    29461 atgcataaca actcaccacc aacaccttga gaacgtgctt tacgatcagt cattacacct
    29521 ttagaagtac taacaatagc aatacccaag ccattcataa cacttggaat ctcactagac
    29581 gctttataaa tacgcaaacc ggggcgagat acacgcttga tttgttcaat tacaggacga
    29641 cctgcatagt attttaattg aatttccaat atagacttta cgtcagatga aactgcgaag
    29701 tcctcaatat atccttcttc tttcaatacc tttgcaatag cacactttaa ttttgaagaa
    29761 ggcattgcaa ccgctgcttt attagcacgt tgcgcattgc ggatacgagt caacatatcg
    29821 gaaataggat catgcatact cattcttaat tactcctatt accagctggc tttaacaaca
    29881 cccggaattt cgccacgcat ggcgatttca cggattttaa tacgacccaa accaaattta
    29941 cggaaagtac cacgagggcg acctgtcaaa gcacaacgac gacgttgacg cacaggtgcc
    30001 gcattacgag gaatggattg aaacctcaaa cgagcctcaa aacgctcttc ctcagttgca
    30061 ttcgaatcat tgattaccgc tttaattgcc gcgcgtttag ccgcatattt tttagccaaa
    30121 gcttgacgtt tcagattacg attaataagt gctttcttag ccatgattat cctttgaacg
    30181 gaaatttaaa caatgacaat aaagctttcg cttcctcatc ggtttttgct gtagtagtaa
    30241 tagtaatatt caaaccacgc aaagcatcaa ttttatcgta ttcaatttcc ggaaaaataa
    30301 tttgctcacg aacacccata ttgtaattgc cacggccatc aaatgattta ccgctcacac
    30361 cacggaagtc acgtacgcga ggtaatgcaa tagtaatcaa acgatccaag aattcaaaca
    30421 tttgatcacg acgcaatgtt actttgcaac caaccggata gttatcacgg attttaaaac
    30481 ctgcgataga tttacgggca acagtaacaa ccggtttttg accggcaatt ttctctaaat
    30541 cggaaacagc atgttccata acttttttgt cagcaacagc ctcacccaca cccatattca
    30601 aggtgatttt ttcaatacgc gggacttcca ttactgattt gtaaccaaat tgtttaacca
    30661 attcaggaac aactgtctct ttataaaact ctctcaaccg agccatgtta tctccttatg
    30721 ccccaatgat agagccattt gatttgaaga aacgaacgcg tttaactttg ccttcatttt
    30781 caatcagctt aataccaaca cggtccgctt tattagtttc cggattcagg attgcgatat
    30841 tagaaatatc caaaggcatt tctttagtaa taataccgcc ctcaatgcca cgcattggat
    30901 taggtttttg atggcgtttt acaacattaa cgccctcaac aacaacttta tcacccaaca
    30961 ctcgaactac ttgaccctgc ttacctttat ccttaccagc aattactaca accctatcgc
    31021 ctttaatgat tttattcatc gtgccattcc ttataatact tcaggtgcca atgaaacgat
    31081 tttcataaat cgctcagtac gcaattcacg ggttaccgga ccaaagatac gagtacccaa
    31141 aggttcaagt ttattattca gtaacacggc ggcattgtta tcgaatttaa ttaacgcacc
    31201 atcaggacga cgtacaccct tagcagtacg aacaactacc gcattatata catcgccttt
    31261 tttgacacgg ccacgcggag ccgcatcttt aactgccact ttaataatat cgccaacaga
    31321 agcgtagcga cgcttagatc cgcccaatac cttgatacac attacgcgac gcgcaccaga
    31381 gttatcagcc acatctaaga tggtctgcat ttgaatcatg ttattacctt taaattaacc
    31441 aacttaattt accactttca gataacttac agcaaagccg ctgcttatta aatgaaacct
    31501 tgcggttcaa gtaaaccagt cttggacccc gaaagggaag aaacttccag aagaaactga
    31561 aagacaggaa acgaagttta cacgcaaatt aaatttgctg caatacttcg tttcccattc
    31621 caagcacgtt gctttaattc ttaaatagaa cgtgctttct caaccagctc actgacaacc
    31681 caagatttag tttttgacaa tggacgggat tccgatataa caaccacatc accaattcca
    31741 tattgattat tttcatcatg ggcatggatt ttagtagata accgaataat cttaccatac
    31801 agcggatgtt ttactttacg ctcaaccaat actgttacgg ttttatccat tttgtcgctt
    31861 actactttgc cttgcaaagt acgaacattt ttagtttcgc tcattactta gcaccttttt
    31921 cagttaaaac ggttttaata cgagcaatat cgcgacgtac acgtttcaat tcacttggtt
    31981 tgcctaattg accggtagcg ttttgcatac gtaagccaaa ctgagctttc aacaagtcca
    32041 acaaatctgc attcaactgc tcaacggatt tgtctttcaa ttcatttgct ttcattattg
    32101 acccacctgt cttactacaa aggttgtagg aataggcaat ttggcagcag ccaactcgaa
    32161 tgcttcacga gccagttcct ctggaacgcc atccatttca tacaacactt tacctggttt
    32221 aatttcggca atgtaatatt ccacgttacc tttaccgcca cccatacgaa cttgaatagg
    32281 cttttcagta atcggtttat cagggaatac acgaatccaa atacgaccac cacgtttgat
    32341 atgacgggtc attgcacgac gagcagcttc gatttgacgg gcagtcaaac gaccacgacc
    32401 tacggctttc aagccgaact caccgaaact taccttatta ccgcgagtag cgatgccagt
    32461 attgcgaccc ttttgttgct tacggtattt cagtctagtt ggctgcagca ttacgtctac
    32521 ctgcctttct ttgtttactc tcatgttcag gtttggaaga tttaatattg ccttccgtat
    32581 aaacccaaac tttcagaccc aatacaccat atgtggtgtg cgcttcgctg gttgcataat
    32641 ctacatttgc acgtaaagta tgcaatggca cgcgaccttc acgataccat tcgctacggg
    32701 caatatccgc accattcaga cggcctgaag tcataatctt aatgccttta gcaccagaac
    32761 gcattgcatt ttgcattgct cgtttcatag cacgacggaa ttgaacgcgc ttttccaact
    32821 gctgggcaat accgtcagca ataatttgag catccaactc aggacggcgg atctcttcaa
    32881 tatttacatg aacaggtaca cccatcaaga cttgcaagtc acgtttcaaa acctcgatat
    32941 cctcaccttt tttaccgata accacacccg gacgagcgga gtgaatggta atgcgtgcag
    33001 attttgcagg gcgttcaata accactcgac caaccgaagc attggccaat ttttgacgca
    33061 aataattgcg aacatcgata tcctgcttca aaacagtaga aaagtcggtg cttttagcaa
    33121 accattttga agcccagtct ttagttaccg ccaggcgaaa gcctgtaggg ttaatctttt
    33181 gtcccatagc ttttccttag ttacccactg tcacattgat atgacaagtt tgtttttcga
    33241 tgcggttacc gcgacctttg gcgcgagctt gaaaacgttt caagcttggg cctttgtcaa
    33301 caaagatagt taccactttc agttcatcaa tgtccgcacc gttattgtgc tcggcattag
    33361 caatagctga ctccaatact tttttaatca gctcggcacc ttttttagga ctgaaagcca
    33421 aaatattcaa agcttgggca acgtctttac cacgaatcaa atcagctacc aaacgagcct
    33481 tttgagcaga gatacgggca tttttatgtt gtgcatttac tctcatgatt caccttattt
    33541 ctttttagcc tttttatcgg ccaagtggcc tttaaaggta cgggtcaatg agaattcgcc
    33601 taatttatga ccaaccatat tgtcgctgat aaacacaggc acatgggtgc ggccgttgtg
    33661 cacagcaatg gtcagaccga taaaatcagg cagaatggta gaacgacgag accaggtttt
    33721 aatcgggcgt ttgtcgttgc ttgcgcgagc agcatctact tttttcagca aatgcaggtc
    33781 tacatatggg ccttttttca atgaacgagc catactaaat taacctttat ttgagtaacg
    33841 gcgacgaaca atcatgttat ccgtgcgttt gttattacga gtgcggtagc ctttagcagg
    33901 agtaccccat gggctgaccg gttcgcgggc ctcgcccgta cggccttcac caccaccatg
    33961 cgggtgatcg acaggattca tgacaacacc gcgtacggtc ggacgaatac cgcgccaacg
    34021 gttggcaccg gctttaccga tttttttcag gctttgctct tcgttaccaa cttcaccgat
    34081 ggtcgcacgg caatttacgt tgattttacg gacttcgcca gagcgcagac ggacttgagc
    34141 gtacgcgcct tctttagcca gcaataccgc agaagcaccg gcagaacgtg cgatttgagc
    34201 acctttaccg ggtttcattt cgatacagtg gatagtcgta ccaacgggaa tgttgcggat
    34261 cggcagggtg ttgcctactt tgatggcagc ttcagcgccg gaaactaata cagcaccggc
    34321 ttgaataccg cgaggagcaa tgatgtaacg acgctcgccg tctgcatagc acaacagtgc
    34381 gatgaaggca gtacggttag gatcgtattc gatacgctct actttagcag gaatgccgtc
    34441 tttgttacgt ttaaagtcta caacacggta atggtgttta tgaccgccgc ctttgtgacg
    34501 ggtggtgata tgaccattat tgttacggcc ggcagtagaa tttttctttt caagcaaggg
    34561 tgcataaggt gcacctttgt gcaaaccttc tgttaccacg cgaaccatgc cgcgacggcc
    34621 tgcagaggtc ggcttcattt taacgattgc cattttgttt attccttatc tgcagctgca
    34681 gcagcggctt ccaaatccaa ctcttgaccg gcagccaagc ttacataagc ttttttaaca
    34741 tcgctgcggc ggcccaaagt acgaccaaaa cgcttagttt tgcctttagt tgtaacggta
    34801 gttacagaag caacttgaac accgaacagc agctcgacag ccgctttgat ttcaggtttg
    34861 gctgcatttg ccaaaacttt aaacgtcatt tggttgcgtt tttcagccaa tacgttgctt
    34921 ttttcagaaa cgataggtgc caaaatcact tgagtcaaac gttgttgatt catacccatt
    34981 gctcctctaa ttgtgcaact gcatctttag tgatgattac ttttttgtaa cgcagcaagc
    35041 tgtaaggatc aacttgttga gcttccaaaa ccaacacgtt tggcaagttg cgtgaagcca
    35101 agtaaacatt ctcgtcgagc tgtttggtta caaacaacac ttgctccaga cccagatttt
    35161 tcacttgttc ggcaaaaact ttggttttag gagtttcggc agtcaacgcc tcaatcgcaa
    35221 acaaacgctc gtcacgagtc aattgggaca gaatagtcgc cataccggca cggtacattt
    35281 tgcggtttac tttttgagtg aagttttcgt cgggtttgtt cgggaacgcg cgaccacctt
    35341 tacgccacag cggagaagaa gtcataccgg aacgggcacg gccggtacct ttttgacgcc
    35401 atggtttttt ggttgagtgt tttacttcgg cacgggtttt ttgagcgcga ttgccggagc
    35461 gggcgtttgc caaataggca tttaccagct gatgaaccaa cgcttcattg tattcgcggg
    35521 cgaacaaagc atcagaaaca gacagactgc ctgaaacttg tcctttagcg tcaattactt
    35581 tcaattccat tacgcaccta ctttcacgct gggacgaact acaacatcgc tgttgaccgc
    35641 acctggaaca gcacccttaa ccaacagcag ttggcgttct gcgtcaacac ggacaacttc
    35701 caatttttga acagttgctt tggtgttgcc gtattggccg gccatgcgtt taccggggaa
    35761 cacgcgaccc gggtcttgcg ccataccgat agagcctgga acacggtgag aacgggagtt
    35821 accgtgggaa gtacgctggg cgccgaagtt atgacgtttg atcgtaccgg agaaaccttt
    35881 acctttagag gtaccggtta catcgaccag ttgaccaact tcaaacatag aaacggtgat
    35941 ttcgtcaccg gctttcaatt cagctaattt ttcttcagtc aaagcaaact caatcaaacc
    36001 gcgaccggct tcaacacctg cttttgcaaa gtgtccggct tcggctttgt tgacacgatt
    36061 ggcttttttc tgaccaaagg taacttgaac ggcagtatag ccgtcagtat ctttggattt
    36121 tacttgtgtg acgcggttgg ctgacatatc caaaacggtt accggaacag aaacaccctg
    36181 ttcgtcgaac acgcgggtca taccaacttt gcgtccaacc agacctaaag tcatgattat
    36241 tttcctttta aagtaaaggg acaggctgcg attggcctgt ctttcagaca aagttaaact
    36301 tggcacaaat gtaccaagct cggcattata tctgacaagt taaagaaata tcaacagaaa
    36361 tatcagaaat atcttcaata tgccgtctga agcgttttga attttcagac ggcatagggt
    36421 cggactcttt taaagggtcg gtatccggtc atcacagcgt atgcatcttt ctccgacaaa
    36481 ccggaatatg gttgatg
//
LOCUS       DAWITQ010000005        33652 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.005, whole genome shotgun sequence.
ACCESSION   DAWITQ010000005 DAWITQ010000000
VERSION     DAWITQ010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 33652)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33652)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33652
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.005"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            81..1046
                     /locus_tag="WIX18_000241"
     CDS             81..1046
                     /locus_tag="WIX18_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ5237404.1"
                     /translation="MLRLTALAVCTALALGACSPQNSDSAPQAKEQAVSAAQSEGVSV
                     TVKTARGDVQIPQNPERIAVYDLGMLDTLSKLGVKTGLSIDKNRLPYLDEYFKSTKPA
                     GTLFEPDYEALNAYKPQLIIIGSRAAKAFDKLNEIAPTIEMTADTANLKESAKERIDA
                     LAQIFGKQAEADKLKAEIDASFEAAKTAAQGKGKGLVILVNGGKMSAFGPSSRLGGWL
                     HKDIGLPAVDESIKEGSHGQPISFEYLKEKNPDWLFVLDRSAAIGEEGQAAKDVLDNP
                     LVAETTAWKKEQVVYLVPETYLAAGGAQELLNASKQVADAFNAAK"
     gene            1064..1255
                     /locus_tag="WIX18_000242"
     CDS             1064..1255
                     /locus_tag="WIX18_000242"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237405.1"
                     /translation="MPSETRMQTASCVSDGIARYGRYRGNGGKRFYWNLPHPLPIRRL
                     QTRLSAPTVRTTLFESSTP"
     gene            1274..2242
                     /locus_tag="WIX18_000243"
     CDS             1274..2242
                     /locus_tag="WIX18_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEZ5237406.1"
                     /translation="MTAKPFSLNLTNLLLLAVLFAVSLSVGVADFRWSDVFSLSDSQQ
                     VMFISRLPRTFAIVLTGASMAVAGMIMQILMRNRFVEPSMAGAGQSAALGLLLMSLLL
                     PAAPLPVKMSVAAVAALIGMLVFMLLIRRLPPTAQLMVPLVGIIFGGVVEAVATFIAY
                     ENEMLQMLGVWQQGDFSGVLLGRYELLWATGILALFAYLIADQLTILGLGETVNVNLG
                     LNRTAILWSGLIIVALITSLVIVTVGNIPFVGLVVPNIISRLIGDRLRQSLPAVALLG
                     ASLVLLCDIVGRVIVFPFEIPVSTVFGVLGTALFLWLLLRKPAHAV"
     gene            2232..3206
                     /locus_tag="WIX18_000244"
     CDS             2232..3206
                     /locus_tag="WIX18_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HEZ5237407.1"
                     /translation="MPSENKIAFMQGSPRPLWAAFALLLICCGLFLTLNVKGDWDFVL
                     QLRLTKLAALLMVAYAVGVSTQLFQTLTNNPILTPSILGFDSLYVFLQTLLVFTFGGV
                     GYASLPLTGKFGFELAVMMGGSLLLFYTLIRQGGRDLPRMILIGVIFGILFRSLSSLL
                     SRMIDPEEFTAAQANMFAGFNTVHSELLGIGALILLVSAAVVWRERYRLDVHLLGRDQ
                     AVNLGISYTRNTLWILLWIAALVATATAVVGPVSFFGLLAASLANHFSPSVRHSVRLP
                     MTVCVGGILLVGGQTVFEHFLGMKAVLSVVVEFAGGLVFLYLVLKHKK"
     gene            3251..3877
                     /locus_tag="WIX18_000245"
     CDS             3251..3877
                     /locus_tag="WIX18_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237408.1"
                     /translation="MTQERLPEFFDRAPTLTVQDPLAAFLGAAENGILTYRYADAVRL
                     CGHSCPTVAGAYLMVIKGLKALYGEELPERGGIEAAMQGARDEGTVGVTASVVQLLTG
                     AAPETGFGGIGMQGRFARRHLLSFGVGEINGTLTLRRKDNGKTVAVSLNAALKPFAPQ
                     MRDIMPKAVSGSASTDELKHFGQLWQARVKAFLTESADDPQFVIVREV"
     gene            3960..4718
                     /locus_tag="WIX18_000246"
     CDS             3960..4718
                     /locus_tag="WIX18_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ5237409.1"
                     /translation="MITIRNVSYRIGTRPILDNVSLDIPEGGITALVGPNGAGKSTLF
                     SFMARLRPLESGSIAYRGKNLAGTPTAELARTLSILTQENSIMSRITVRDLLMFGRYP
                     YHQGRPTAECRRIVNGAIEEFHLQDLSDRYLTELSGGQRQRAMIAMVFCQSTDYVLLD
                     EPLNNLDMYHARSLMQILQKLTREHKRTTVAVLHDINQAAAYADHVVAMKNGQVAMQG
                     KPDDIFTAANIKTLFDMDVSVLDHQSKKLIVHHI"
     gene            complement(4777..5115)
                     /locus_tag="WIX18_000247"
     CDS             complement(4777..5115)
                     /locus_tag="WIX18_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEZ5237410.1"
                     /translation="MKKIEAIVKPFKLDDVREALTEIGITGMTVSEVKGFGRQKGHTE
                     IYRGAEYAVDFLPKVKIELVLADDAVERAIDVIVEVARSGKIGDGKIFVLPVEEAIRI
                     RTGERADAAV"
     gene            5580..9566
                     /gene="purL"
                     /locus_tag="WIX18_000248"
     CDS             5580..9566
                     /gene="purL"
                     /locus_tag="WIX18_000248"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HEZ5237411.1"
                     /translation="MSVVLPLRGVTALSDFRVEKLLQKAAALGLPEVKLSSEFWYFAG
                     SEKALDAATVEKLQALLAAQSVEQTPKAREGLHLFLVTPRLGTISPWASKATNIAENC
                     GLAGIERIERGMAVWLEGALTDRQKQQWAALLHDRMTESVLPDFQTASKLFHHLESET
                     FSTVDVLGGGKEALVKANTEMGLALSADEIDYLVENYQALQRNPSDVELMMFAQANSE
                     HCRHKIFNADFILNGEKQPKSLFGMIRDTHNAHPEGTVVAYKDNSSVIEGAKIERFYP
                     NAAENQGYRFHEEDTHIIMKVETHNHPTAIAPFAGAATGAGGEIRDEGATGKGSRPKA
                     GLTGFTVSNLNIPDLKQPWEQAYGKPDHIASPLDIMIEGPIGGAAFNNEFGRPNLLGY
                     FRTFEEKFDGQVRGYHKPIMIAGGLGSIQAQQTHKDEIPEGALLIQLGGPGMLIGLGG
                     GAASSMDTGTNDASLDFNSVQRGNPEIERRAQEVIDRCWQLGDKNPIISIHDVGAGGL
                     SNAFPELVNDAGRGAVFKLREVPLEEHGLTPLQIWCNESQERYVLSILEKDLDAFRAI
                     CERERCPFAVVGTATGDGHLKVRDDLFSNNPVDLPLNVLLGKPPKTTRTDKTVTPYAT
                     EGNPFGKKPFNAGDIDITEAAYRVLRLPAVAAKNFLITIGDRSVGGMTHRDQMVGKYQ
                     TPVADCAVTMMGFNTYRGEAMSMGEKPAVALFDAPASGRMCIGEAITNIAAVNIGDIG
                     NIKLSANWMAACGNEGEDEKLYRTVEAVSKACQALDLSIPVGKDSLSMKTVWQDGADK
                     KSVVSPLSLIISAFAPVEDVRKTVTPELKNVEDSVLLFIDLGFGKARMGGSAFGQVYN
                     NMSGDAPDLDDTSRLKAFYNVIQQLVAEDKLLAYHDRSDGGLFAVLVEMAFAGRCGLD
                     IDLNLLLAQTFITNHTALSQSLRTEEVKALAEWQETIARTLFNEELGAVIQVRKQDVA
                     DIINLFYQQQLHHNVFEIGTLTDENTLIIRDGQTHLISDNLIKLQQTWQETSHQIQRL
                     RDNPACADSEFALIGDNERSALFADVKFDVNEDIAAPFINSGAKPKIAILREQGVNGQ
                     IEMAAAFTRAGFDAYDVHMSDLMAGRFRLADFKMLAACGGFSYGDVLGAGEGWAKSIL
                     FHPALRDQFAAFFADPDTLTLGVCNGCQMVSNLAEIIPGAEAWPKFKRNLSEQFEARL
                     SMVHVPKSASLILNEMQGSSLPVVVSHGEGRADFALHGGNISADLGIALQYVDGQNQV
                     TQTYPLNPNGSPQGIAGITNADGRVTIMMPHPERVYRAAQMSWKPEGWTELSGWYRLF
                     AGARKALG"
     gene            9661..10419
                     /gene="gloB"
                     /locus_tag="WIX18_000249"
     CDS             9661..10419
                     /gene="gloB"
                     /locus_tag="WIX18_000249"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HEZ5237412.1"
                     /translation="MKITPVKALTDNYIWMIQHGNHAVCVDPSEPSPVLEFLVRNRLM
                     LAQTWVTHPHPDHEGGAAALWRGYMESPVYGESDIEAATHTVTAGTQFTFGDGQVTVW
                     ATPGHTDRHTSYLLETSDGIHVFCGDTLFSAGCGRVFTGTIEQLYDSFQRFNRLPENT
                     LFYPAHEYTAANLRFAAHIEPDNADIQTALKAAAHTPTLPVTLAHERRVNPFLRVDLP
                     HVRDRAEALSGKTLNSSLDTFVALRELKNQYRTK"
     gene            10733..15208
                     /gene="mspA"
                     /locus_tag="WIX18_000250"
                     /gene_synonym="ausI"
     CDS             10733..15208
                     /gene="mspA"
                     /locus_tag="WIX18_000250"
                     /gene_synonym="ausI"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin/serine protease MspA"
                     /protein_id="HEZ5237413.1"
                     /translation="MRFTHTTPFCSVLSTLGLFAVSPAYSSIVRNDVDYQYFRDFAEN
                     KGAFAVGASNISIQDKQGKILGRVLNGIPMPDFRVSNRQTAIATLIHPQYVNSVKHNV
                     GYGSIQFGNDTQNPEEQAYTYRLVSRNPHPDYDYHLPRLNKLVTEISPAALSSVPLLG
                     NGQPKANAYLDTDRFPYFVRLGSGTQQVRKADGTRTRTAPAYQYLTGGTPLKVLGFQN
                     HGLLVGGSLTDQPLNTYAIAGDSGSPLFAFDKHENRWVLAGVLSTYAGFDNFFNKYIV
                     TQPEFIRSTIRQYETRLDVGLTTNELIWRDNGNGDSTLQGLNERITLPIANPSLAPQN
                     DSRHMPSEDAGKTLILSSRFDNKTLMLADNINQGAGALQFDSNFTVVGKNHTWQGAGV
                     IVADGKRVFWQVSNPKGDRLSKLGAGTLIANGQGINQGDISIGEGTVVLAQKAASDGS
                     KQAFNQVGITSGRGTAVLADSQQIKPENLYFGFRGGRLDLNGNNLAFTHIRHADGGAQ
                     IVNHNPDQAATLTLTGNPVLSPEHVEWVQWGNRPQGNAAVYEYINPHRNRRTDYFILK
                     PGGNPREFFPLNMENSTSWQFIGNNRQQAAKQVAQAENARPDLITFGGYLGENAQTGK
                     AAPSYSKTNIEWVNSPNTPHKPSPYTNTPTRTGAGVPTITASKKAATPAPTSHGMPTA
                     PKTGNFSDITGEAAIEKNRHIANAAVYGRPEYRYNGALNLHYRPKRTDSTLLLNGGMN
                     LNGEVLIEGGNMIVSGRPVPHAYDHQAKREPVLENEWTDGSFKAARFTLRNHARLTAG
                     RNTAHLDGDITAYNLSGIDLGFIQGKTPECYRSYHSGSTHCTPNAVLKAENYRALPVT
                     QVRGDITLNDRSELRLGKAHLYGSIRAGKDTAVRMEADSNWTLSQSSHTGALTLDGAQ
                     ITLNPDFANNTHNNRFNTLTVNGTLDGFGTFRFLTGIVRKQNAPPLKLEGDSRGAFQI
                     HVKNTGQEPQTTESLALVSLNPKHSHQARFTLQNGYADLGAYRYILRKNNNGYSLYNP
                     LKEAELQIEATRAEHERNQQAYNQLQATDISRQVQHDSDATRQALQAWQNSQTELARI
                     DSQVQYLSAQLKQTDPLTGILTRAQNLCAAQGYSADICRQVAKAADTNDLTLFETELD
                     TYIERVEMAESELDKARQGGDAQAVETARHAYLNALNRLSRQIHSLKTGVAGIRMPNL
                     AELISRSANTAVSEQAAYNTGRQQAGRRIDRHLTDPQQQNIWLETGTQQTDYHSGTHR
                     PYQQTTNYAHIGIQTGITDRLSVGTILTDERTNNRFDEGVSARNRSNGAHLFVKGENG
                     ALFAAADLGYSNSRTRFTDYDGAAVRRHAWDAGINTGIKIDTGINLRPYAGIRINRSN
                     GNRYVLDGAEINSPAQIQTTWHAGIRLDKTVELGQAKLTPAFSSDYHHTRQNSGSALS
                     VNDRTLLQQAAHGTLHTLQIDAGYKGWNAKLHAAYGKDSNTARHKQAGIKIGYNW"
     gene            15440..16894
                     /gene="mgtE"
                     /locus_tag="WIX18_000251"
     CDS             15440..16894
                     /gene="mgtE"
                     /locus_tag="WIX18_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HEZ5237414.1"
                     /translation="MSIEPTPPNLENDGIENDVERVSADFDRVHSLCEILEPAFEQIE
                     NGTPLEDASLRDKLTELTVLLSELHPADVAAVLESLPPRERNIVWILVKPEDDGEVLL
                     EVSDAVRETLIESMDKDELLAAVDDLDADELAELADDLPHQVVYEALQTRDEEERAQV
                     KAAMSYEDNQVGAIMDFELVSIRADVACEVVLRYLRRFDSLPDHTDKIFVVDENDVLQ
                     GVLPIRKLLVADPEDLVENVMAKDVVRFRAEDDVEEAAQAFERYDLVTAPVVDENKKL
                     IGRITIDEMVDVIREESEADMLNMAGLQEEEDLFAPVLDSVKNRWMWLAINLCTAFLA
                     SRVIGAFEGSIEKIVALAALMPIVAGIGGNSGNQTITMIVRAMAMGQLTGMQAGRLLK
                     KEVGVALVNGIIWGTVMGAVSWLLYGSLGIGLVMIAAMTLNLLLAATVGVLIPVVMEK
                     FGRDPALGSSVLITAVTDSGGFLIFLGLATLFLL"
     gene            complement(16980..17888)
                     /gene="hslO"
                     /locus_tag="WIX18_000252"
     CDS             complement(16980..17888)
                     /gene="hslO"
                     /locus_tag="WIX18_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HEZ5237415.1"
                     /translation="MNQTAINRADVRTRFIFDDMPVRGLHVRLENVWQHIVKQKNYPA
                     AIRRALGELLAAGVLLSGNLKNEGTLIVQVQGQGRLKMLVAEATSDRTVRATARWDEA
                     AEIADDESLGDLLGGNGVFVLTLQPKDGEPWQGVVPLEGDGIAQMLVNYMKRSEQLDT
                     HIVLSASDEAAGGLLVQRLPEEVLDEEAWEHVSTLARTLTAEELAGLDAQHVLYRLFH
                     ETPPRVFEPETFEFSCTCSRGKVSDMLLMLGGEEVGGVVVEQGSIEVDCDFCHSKYVF
                     DETDVNALFGEDVVGVAKGLPRHTVQ"
     gene            18133..18888
                     /locus_tag="WIX18_000253"
     CDS             18133..18888
                     /locus_tag="WIX18_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEZ5237416.1"
                     /translation="MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAED
                     EQPVLPINRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMGLN
                     EQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSGFMQHIFKRAM
                     GINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRISHVGLYIGNNRFIHAPRTG
                     KNIEITSLSHKYWSGKYAFARRVKKNDPSRFLN"
     gene            18907..19125
                     /locus_tag="WIX18_000254"
     CDS             18907..19125
                     /locus_tag="WIX18_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237417.1"
                     /translation="MSMPEIPKWYDDDGQIVSCTEKIKVMSENMAELYQTAQDAFEDA
                     LLMGCGERQLRDYLLALIEGLENPYRKV"
     gene            19270..19614
                     /locus_tag="WIX18_000255"
     CDS             19270..19614
                     /locus_tag="WIX18_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HEZ5237418.1"
                     /translation="MNIIRALLIILGCLAAGETAVFLAGIKLPGSIVGMGVLFALLQA
                     GWVKTSWLQQLTDALMANLTLFLVPPCVAVISYLDLIADDWFSILVSASASTLCVLLV
                     TGKVHRWIRSII"
     gene            19614..20306
                     /locus_tag="WIX18_000256"
     CDS             19614..20306
                     /locus_tag="WIX18_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HEZ5237419.1"
                     /translation="MNEILRQPSVLLFLTLAVYALAIIVRTRTGNIFCNPVLVSTIVL
                     IAYLKILDIDYAVYHNAAQFIDFWLKPAVVVLAVPLYQNRRKIFNQWLPVIVSQLAGS
                     VTGIVTGMYFAKWLGAEREVVLSLASKSVTNPIAIEITRSIGGIPAITAATVIIAGLV
                     GQIAGYKMLKNTVVMPSSVGMSLGTASHAMGIAASLERSRRMAAYAGLGLTFNGVLTA
                     LIAPLLIPVLGF"
     gene            20373..21593
                     /gene="argJ"
                     /locus_tag="WIX18_000257"
     CDS             20373..21593
                     /gene="argJ"
                     /locus_tag="WIX18_000257"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HEZ5237420.1"
                     /translation="MAVNLTEKTAEQLPDIDGIALYTAQAGVKKPGHTDLTLIAVAAG
                     STVGAVFTTNRFCAAPVHIAKSHLFDEDGVRALIINTGNANAGTGAQGRIDALAVCAA
                     AARQIGCKPNQVLPFSTGVILEPLPADKIIAALPKMQPAFWNEAARAIMTTDTVPKAA
                     SREGKVGDKHTVRATGIAKGSGMIHPNMATMLGFIATDAKVSQPVLQLMTQEIADETF
                     NTITVDGDTSTNDSFVIIATGKNSQSEIDNIADPRYAQLKELLCSLALELAQAIVRDG
                     EGATKFITVRVENAKTRDEARQAAYAVARSPLVKTAFFASDPNLGRLLAAIGYAGVAD
                     LDTDLVEMYLDDILVAEHGGRAASYTEAQGQAVMSKDEITVRIKLHRGQAAATVYTCD
                     LSHGYVSINADYRS"
     gene            21756..23165
                     /locus_tag="WIX18_000258"
     CDS             21756..23165
                     /locus_tag="WIX18_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEZ5237421.1"
                     /translation="MTSTFPRRLARKIRQTRRLSRKSIAFLFLLAGSALVALTALFFA
                     HLADFALELNAKLVQQYPWFAWVALPLGLPLIAWLTRKFAPFTAGSGIPQVIASLSLP
                     YGAQKTRLIRLGQTLLKIPLTFLGMLFGASIGREGPSVQVGAAVMGAWGAWCKKHGLA
                     FKGMQENDLMAAGAAGGLAAAFNAPLAGVIFAIEELGRGIMLRWERQILLGVLASGFI
                     QVAIQGNNPYFSGFNGGVLEHIFLWVALSGLVCGAAGGLFGRLLYRGAAAFAPRKIRG
                     FIRNRPLLLAALMGLLLALLGTFYQGKTYGTGYHEAAQALHGIYEAPFGLAAAKWLAT
                     VFSYWAGVPGGIFTPSLTIGAVLGEHIAAIADISQGANIIVLICMAAFLAGATQSPIT
                     SAVVVMEMTGGQSLLFWMLIACIFASQVSRQFSPRPFYHASGMRFRQRVLQETAAQTG
                     NAPARPQTANSKTGMPSEN"
     gene            23355..24746
                     /gene="hrpA"
                     /locus_tag="WIX18_000259"
     CDS             23355..24746
                     /gene="hrpA"
                     /locus_tag="WIX18_000259"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HEZ5237422.1"
                     /translation="MFPDFSQTLSKDRHFLRSAFKNPNKYGGLSKVEEKYRKSHEIFL
                     KRLAALPKPEFDNTLPVHEKLDEIKKTVAEHQVTIICGETGSGKTTQLPKICLELGRG
                     AAGLIGHTQPRRLAARSVAERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGIL
                     LAETQTDRYLAAYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAER
                     FSQHFNGAPVLEVSGRTYPVEILYRPLIGKDEDDAEIELTDAIVDAADELARYGEGDI
                     LVFLPGEREIREAAEALRKSTLRRNDEILPLFARLSHAEQHKIFHPSGAKRRIVLATN
                     VAETSLTVPGIKYVIDTGLARVKRYSARAKVEQLHIEKISQAAARQRSGRCGRVSAGV
                     CIRLFSEENFNNRPEFTDPEIARSNLAAVILRMASLKLGDVAAFPFLEMPDSRYINDG
                     FQVLLELGAVEAA"
     gene            24847..25974
                     /locus_tag="WIX18_000260"
     CDS             24847..25974
                     /locus_tag="WIX18_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237423.1"
                     /translation="MKHLLIDFENVQPQNLDKLLTENTHIWLFIGVLHKMLPISLVQS
                     LLRFGERVHLVQLQKTGKNALDFYLSYYLGQITATDPNAQIGILSRDGGYDVLVEHIL
                     KNHQAKGIVRLANIDEVQHQKITTEPPSALLENTPQPETTLKPQQPLTSYFQAALTAL
                     RRPDAFRPCRLHNLRQNLRKHILSDLFKEKTDEECEITTANVINKLKAQNFISIDEQE
                     TVSYHLSDNDLLQRIQRHILSQRPKTYADFQAVVQNRADALHLTVGTNDIQSFARHLR
                     DQNLIRQNNGKIEYAPFTEPKPQPTPKQPKKTAWEPDEIIWKKVIAALSLKNRPNKTK
                     TLRNTIQALTKSNAQETDKLLQHLQDTQVLRIDGTKIVYIK"
     gene            26151..27728
                     /gene="lpt3"
                     /locus_tag="WIX18_000261"
     CDS             26151..27728
                     /gene="lpt3"
                     /locus_tag="WIX18_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipooligosaccharide phosphoethanolamine
                     transferase"
                     /protein_id="HEZ5237424.1"
                     /translation="MMKKSLFVLFLYSSLLTASEIAYRFVFGIETLPAAKMAETFALT
                     FVIAALYLFARYKTSRLLIALFFAFSIIANNVHYAVYQSWMTGINYWLMLKEVTEVGS
                     AGASMLDKLWLPALWGVAEVVLFCSLAKFRHKTHFSADILFAFLMLMIFVRSFDTKQE
                     HGISPKPTYSRIKANYFSFGYFVGRVLPYQLFDLSKIPVFKQSAPSKIGQGSVQNIVL
                     IMGESESAAHLKLFGYGRETSPFLTQLSQADFKPIVKQSYSAGFMTAVSLPSFFNVIP
                     HANGLEQISGGDTNMFRLAKEQGYETYFYSAQAENQMAILNLIGKKWIDHLIQPTQLG
                     YGNGDNMPDEKLLPLFDKINLQQGRHFIVLHQRGSHAPYGALLQPQDKVFGEADIVDK
                     YDNTIHKTDQMIQTVFEQLQKQPDGNWLFAYTSDHGQYVRQDIYNQGTVQPDSYLVPL
                     VLYSPDKAVQQAANQAFAPCEIAFHQQLSTFLIHTLGYDMPVSGCREGSVTGNLITGD
                     AGSLNIRDGKAEYVYPQ"
     gene            27794..31036
                     /locus_tag="WIX18_000262"
     CDS             27794..31036
                     /locus_tag="WIX18_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3418 domain-containing protein"
                     /protein_id="HEZ5237425.1"
                     /translation="MQNMKNQVRGSGMDARSNPANVSDGLQNSSSHIGTNTRYRLTKL
                     GEQMARLPIDPKIARILLAAKKHDCMAEILVIASALSIQDPRERPLEARDAASKAHER
                     FTDKQSDFLAYLNIWDSFQRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLAQT
                     AIEMGLTTKEAAFRRSPEVRQLTSSENAGDQDLSAKLKQKQLDKKQHRAQIRAAKEAG
                     YEQIHRALLTGLIANVGMKSPDGNDYTSTRGSRFHLFPASALFKAKPKWVMAAELVET
                     TKLYARDVAAIQPEWIEQEAPHLVRYHYFEPHWEQKRGEVIASERVTLYGLTVLPRRP
                     VSYGRIAPEEAREIFIRGALVAQECDLKADFFVHNKKLIKEITELEHKSRKQDVLVDD
                     EALFAFYNERLPEMAWKDAQGSVWGSEDSVRIIESDKAERSSENERNEFRKNKRNGSR
                     QNENHGNTVGWVENPTSAATAKTVGFDNPTYATQQPTPSPEREGRGEGKTVAAQTNFS
                     ATAANPLPQEREQSASASTFSDDLRPANLQQTAPSPVGEGWGESKTVATQTNFSATST
                     LSDDPKPKKQPAPQKGRLKPLPLADIRTFQAWLKTAECDNPRLLFLSRDDLMQHAAAH
                     ITEEQFPKFWQTADGKFKLSYRFEPHHPLDGVTLTLPLTVLNRISPAALEWLVPGMLR
                     EKIQLLIKALPKQIRRICVPVPEFITQFLSQNPDRNAPILPQLAQAIAKTAGDIRIFE
                     QINQDEWAAFRLPEHCYFNLRIIDDGGQELAIGRDLIQIQQQLGQAAAVTFRDNTQEF
                     ERDNVTTWDIGILPESIKFARGKQQLTGYLGLQKEKDGRIALRLFDTIEAAEQAHRQG
                     VIELMKLQLKEQVKDLNKGIQGFTQAAMLLKHINADTLRDDLTQAVCDRAFIGEDELP
                     RNEKAFKEQIKRARSRLPAVKEALSRYLQETAAAYAELNSKLGKHPLTHLLRQRLQTL
                     LAAGFATRTPWAQWPRLPIYLKAMTLRLEKYSSNPARDAAREADIQELEQMWQEKNDG
                     LVKQGQPISDNLAAFKWMIEELRVSLFAQELKTPYPVSVKRLLKEWEKIF"
     gene            31082..31933
                     /locus_tag="WIX18_000263"
     CDS             31082..31933
                     /locus_tag="WIX18_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEZ5237426.1"
                     /translation="MNTISSIMSLENFQLIKTQLGVPSYENDRVAIYQGDCIQLMDKI
                     SKGSFQMTITSPPYNIGKEYESILDLEHYLEWCERWMQSIHHLTEDSGCFWLNLGYLH
                     VEKKGLAVPIPYLLWDKTNFFLLQEVVWNYAAGVACRNRFSPRNEKLLWYVKNPAKYT
                     FNLDAVRDPNVKYPNQKKNGKLKCNPLGKNPTDVWQIAKVTSGRNRSSRERTAHPAQF
                     PLELIERIIRASSNQNDVILDPFIGSGTTALAGLKNNRFVIGFEINDEYIDIIKERFK
                     EYDLQNT"
     gene            complement(31990..32589)
                     /locus_tag="WIX18_000264"
     CDS             complement(31990..32589)
                     /locus_tag="WIX18_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ScaI family restriction endonuclease"
                     /protein_id="HEZ5237427.1"
                     /translation="MNRSKISPYASLNEELWISKTEELIKQHPLSEKEIVQLCLDSWE
                     NIFSSRIGNLQIGKNFFPSPQIVGALLHALIPANIEARFENWQGEKNKYDKDIVYIKD
                     DYYSIELKTSSDPKYIFGNRSYAQPQDGITGKSKNGYYLTINFEKFMPDLKLRPEIKI
                     IRFGWLDHTDWIAQTAATGQQARLSPEAYRSKLKILYQK"
     gene            complement(32591..32806)
                     /locus_tag="WIX18_000265"
     CDS             complement(32591..32806)
                     /locus_tag="WIX18_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009117006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ5237428.1"
                     /translation="MENELVEFGKRVKHYRLLNGWSQEELAEKVGLHRTYIGSVERGE
                     RNISLLNISLLAKSFSINISELVEGIK"
     gene            complement(33238..33652)
                     /locus_tag="WIX18_000266"
                     /pseudo
     CDS             complement(33238..33652)
                     /locus_tag="WIX18_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         8427 a        10063 c         8121 g         7041 t
ORIGIN      
        1 tatcatttat cctttctaaa gccgttccgg tttgtccgac cggcggcttt gccccaatat
       61 ccccattttg gagataccct atgttacgtt tgactgcttt agccgtatgc accgccctcg
      121 ctttgggcgc gtgttcgccg caaaattccg actctgcccc acaagccaaa gaacaggcgg
      181 tttccgccgc acaatccgaa ggcgtgtccg ttaccgtcaa aacggcgcgc ggcgatgttc
      241 aaataccgca aaaccccgaa cgtatcgccg tttacgattt gggtatgctc gacaccttga
      301 gcaaactggg cgtgaaaacc ggtttgtcca tcgataaaaa ccgcctgccc tacttggacg
      361 aatatttcaa atccacgaaa cctgccggca cgctgtttga gccggattac gaagcactca
      421 acgcttacaa gccgcagctc atcatcatcg gcagccgcgc cgccaaagca tttgacaaat
      481 tgaacgaaat cgcgccgacc atcgaaatga ccgccgatac cgccaacctc aaagaaagtg
      541 ccaaagagcg catcgacgcg ctggcgcaaa tcttcggcaa acaggcggaa gccgacaagc
      601 tgaaggcgga aatcgatgct tcgtttgaag cggcgaaaac tgccgcacaa ggcaaaggca
      661 aaggtttggt gattttggtc aacggcggca agatgtccgc cttcggcccg tcttcacgac
      721 tgggcggctg gctgcacaaa gacatcggtt tgcccgctgt cgatgaatca attaaagaag
      781 gcagccacgg tcagcctatc agctttgaat acctgaaaga gaaaaatccc gactggctgt
      841 tcgtccttga ccgcagcgcg gccatcggcg aagagggtca ggcggcgaaa gacgtgttgg
      901 ataatccgct ggttgccgaa acaaccgctt ggaaaaaaga acaggtggtt tacctcgttc
      961 ccgaaactta tttggcagcc ggtggcgcgc aagagctgct gaatgcaagc aaacaggttg
     1021 cggatgcgtt caacgcggca aaataatgaa acggcggcat tcgatgccgt ctgaaacacg
     1081 gatgcaaacc gcttcctgtg tttcagacgg cattgcccga tacgggcgtt atcgcgggaa
     1141 tggcggcaag cgtttttatt ggaacttgcc ccatcctttg cccatacgga ggcttcaaac
     1201 aaggctttcc gctccgacgg ttcggactac cttgtttgaa tcttctacgc cttaacgctt
     1261 ttcccttctg tttatgactg ccaaaccttt ttccctcaac ctgaccaacc tcctgctgct
     1321 ggcggtattg tttgccgtca gcctgtcggt gggcgttgcc gatttccgct ggtcggatgt
     1381 gttttcccta tccgacagcc agcaggttat gttcatcagc cgcctgccgc gcacgtttgc
     1441 gattgtgctg acgggcgcgt cgatggcggt ggcggggatg attatgcaga ttctgatgcg
     1501 caaccgtttt gtcgagcctt ctatggcggg cgcgggtcag agtgcggctt tgggtttgct
     1561 tctgatgtcc ctgctgctgc ctgccgcgcc gctgccggtc aaaatgtcgg ttgccgccgt
     1621 tgccgcgcta atcggaatgc tggtgtttat gctgcttatc cgccgtctgc cgccgacggc
     1681 gcaattaatg gtgccgctgg tggggattat tttcggcggc gtggttgagg cagtggcgac
     1741 gtttatcgcg tatgaaaacg aaatgctgca aatgctcggc gtgtggcaac agggcgattt
     1801 ttccggcgtg ttgctcggac ggtatgaact gttgtgggca acggggattt tggctttgtt
     1861 tgcctatttg attgccgacc agctgacgat tttgggtttg ggcgaaacgg taaacgtgaa
     1921 cttggggctg aaccggacgg cgattctgtg gtcggggctg attattgtgg ctttgattac
     1981 gtcgctggtt atcgttacgg tcggcaatat tccgtttgtc gggctggtcg tgccgaacat
     2041 catcagccgc ctgataggcg acaggctgcg ccaaagcctg cctgcggtgg ctttgctggg
     2101 tgcgtctttg gttttattgt gcgatattgt cggacgcgtg attgtgtttc cgtttgaaat
     2161 tccggtatcg accgtcttcg gcgtattggg tacggcgttg tttttatggc ttttgttaag
     2221 gaaacctgct catgccgtct gaaaacaaaa ttgcatttat gcaaggttcc ccgcgcccgt
     2281 tatgggcggc attcgcactc ttactgatct gctgcggact gtttttaacg ctcaacgtca
     2341 aaggcgattg ggattttgtt ttgcaactgc ggctgaccaa acttgccgcg ctgctgatgg
     2401 tcgcctatgc ggtcggcgtg tccacgcaac tcttccaaac actgaccaac aatccgattc
     2461 tgaccccttc gattttgggt ttcgattcgc tgtatgtgtt tttgcagacc ttgctggtgt
     2521 ttacgttcgg cggcgtgggc tatgcttccc tgccgttgac gggcaaattc ggctttgaac
     2581 ttgccgttat gatgggcggc tcgctgctgc tgttttacac gctcatccgt cagggcggac
     2641 gcgatttgcc gcgtatgatt ttaatcggcg tgattttcgg gattttgttc cgcagcctgt
     2701 cgtcgctgct ttcgcgcatg atcgaccccg aagaatttac ggcggcgcag gcgaatatgt
     2761 ttgccggatt caataccgtc cacagcgagc ttttgggcat aggcgcgctg attctgctcg
     2821 tcagcgcggc ggtcgtttgg cgcgaacgct accgcttgga cgtacacctt ttggggcgcg
     2881 accaagccgt caatttgggc atcagctaca cgcgcaacac cttgtggata ctgctttgga
     2941 ttgccgcatt ggtggcgacg gcgaccgccg tggtcggccc ggtaagcttt ttcgggcttc
     3001 tcgccgcctc gcttgccaac cacttttccc cgtccgtgcg ccattccgtc cgcctgccga
     3061 tgacggtttg tgtcggcggc atcctcctgg tcggcggaca gaccgtattc gaacacttct
     3121 tgggcatgaa ggcggtatta agcgtggtgg tcgaatttgc gggcggactc gttttcctct
     3181 atctcgtttt aaaacacaaa aaatgacgga tgccatctga acggcagccc gccccgaaag
     3241 gacaaaccat atgacgcaag aacgtttacc cgaatttttc gaccgcgccc cgacgctgac
     3301 cgtacaagac ccgcttgccg cattcctcgg cgcggccgaa aacggcatcc tcacttaccg
     3361 ctacgccgat gccgtgcgcc tgtgcggaca ttcctgcccg accgtcgcgg gcgcgtacct
     3421 gatggttatc aaaggtctga aagcccttta cggcgaagag ctgcccgaac gcggcggcat
     3481 cgaagccgcc atgcagggag cgcgcgacga aggcacggtc ggcgtaaccg cgtccgtcgt
     3541 ccaactcctc accggcgcag cccccgaaac cggctttggc ggcatcggaa tgcagggacg
     3601 ctttgcccgc cgccacctct tatcctttgg tgtaggcgaa atcaacggca cactgaccct
     3661 gcgccgcaaa gacaacggca aaaccgtcgc cgtcagcctc aacgccgccc tgaaaccctt
     3721 cgcaccgcaa atgcgcgaca tcatgcccaa agccgtcagc ggcagcgcaa gtaccgacga
     3781 actcaaacac ttcggacaac tctggcaggc acgcgttaaa gcatttttga ccgaatcggc
     3841 ggacgacccg cagttcgtca tcgtccgcga agtgtgagcg ttcagacggc attccgaatt
     3901 tcaaatgccg tctgaacccc gccaaacaac aacaaaccta cgcccgacaa gcatccgcca
     3961 tgattaccat ccgcaacgtc agctaccgca tcggcacacg ccccatcctc gacaacgtca
     4021 gcctcgacat ccccgaaggc ggcattaccg ccctcgtcgg ccccaacggt gcgggcaaat
     4081 ccaccctgtt ttcctttatg gcgcggctgc gcccgcttga aagcggcagc atcgcctacc
     4141 gaggcaaaaa ccttgccggc actcccaccg ccgaactcgc ccgcacgctc tccatcctca
     4201 cccaagaaaa cagcatcatg agccgcatta ccgtgcgcga cctgctgatg ttcggacgtt
     4261 acccctacca tcaaggcaga ccgactgccg aatgccgccg tatcgttaac ggtgcaatcg
     4321 aagaattcca cctgcaagac ctctccgacc gctacctgac cgagctctcc ggcggacaac
     4381 gccaacgcgc catgattgcg atggtgttct gccaaagcac cgactacgtc cttttggacg
     4441 aaccgctgaa caacctcgat atgtatcacg cccgctcgct catgcagatt ctgcaaaagc
     4501 tcacgcgcga acacaaacgc accaccgtcg ccgtattgca cgacatcaac caggccgccg
     4561 cctacgccga ccacgtcgtc gccatgaaaa acggccaagt cgccatgcag ggcaagcccg
     4621 acgacatttt caccgccgca aacatcaaaa ccctgttcga tatggatgtg tccgtcctcg
     4681 accaccaaag caaaaaactc atcgtccacc atatctgaag ctcaaaaaga aaatgccgtc
     4741 tgaaaacctt tcagacggca tttccattcc aaacgctcaa accgccgcgt ccgcacgttc
     4801 gcccgtgcgg atacggattg cctcctcgac cggcagcaca aaaatcttgc cgtcgccgat
     4861 ttttcccgaa cgcgccacct cgacaatcac gtcaatcgcg cgttccacag catcatccgc
     4921 caacaccagc tcgattttga ctttgggcag gaaatcgacg gcgtattccg caccgcgata
     4981 gatttccgta tgccccttct gcctgccgaa ccctttgacc tcgctgacgg tcatgcccgt
     5041 aatgccgatt tccgtcaacg cctcgcgcac gtcgtcgagt ttgaacggtt tgacaatcgc
     5101 ctcgattttt ttcatcacat tctccattaa ttaacgtaaa caaacgacaa atatagcaga
     5161 aaccgccggc aaacgataaa cggtactgtt cgcccggcga tgcggcgatt tgccggaaac
     5221 cgtcattccc gcgcaggcgg gaatcccgat ctctgcattt cagcaatatt taaaggtttc
     5281 tgtaaatcca aacttccata ttcctaaccg tacggaaacg acggcatttg atctaaaaac
     5341 atacggaagc agttgcccgc ccctctactt cctgcaatta tccgcatacc cggctttggg
     5401 taaaaatcag aaaaacagat aaaaccctta ttccttaata tcttcagacg gcacctgtat
     5461 tttccccaac tgtatgccgt ctgaagattg tcaacatttt aagccaaaat atccaagcaa
     5521 tacaaacctg tccggcgtat aatccctctt tttcccaacc gcatttgaga gccgaatcca
     5581 tgtctgtcgt tttgcccttg cgcggcgtta ccgccctttc cgatttccgt gtcgaaaaac
     5641 tcttgcaaaa agccgccgca ctcggactgc ccgaagtcaa attaagcagc gaattttggt
     5701 atttcgccgg cagcgagaaa gcacttgatg ccgcgactgt cgaaaaactg caagccttgt
     5761 tggcggcgca aagcgttgaa caaacgccaa aagcgcgcga gggcttgcat ttgtttttgg
     5821 tcacgccccg tttgggtacg atttcgccgt gggcttccaa ggcgaccaat atcgcggaaa
     5881 actgcggttt ggcaggcata gagcgcatcg agcgcggtat ggcggtgtgg ctggaaggcg
     5941 cgcttaccga caggcaaaaa caacaatggg cggctttgct gcacgaccgc atgaccgaat
     6001 ccgtattgcc cgattttcag acggcatcca aattattcca ccatctcgaa tccgaaacct
     6061 tctccaccgt cgatgttttg ggcggcggta aagaggcttt ggtcaaagcc aataccgaaa
     6121 tgggtttggc actctccgcc gacgaaatcg attatctggt tgaaaactat caggctttgc
     6181 agcgcaatcc gtccgatgtg gagctgatga tgttcgcgca ggcaaacagc gaacactgcc
     6241 gccacaaaat cttcaacgcc gatttcatcc tcaacggcga aaaacaaccg aaatccctgt
     6301 tcggcatgat acgcgacacg cacaacgcgc atcccgaagg tacggtcgtc gcctataaag
     6361 acaattcgtc cgtgatcgaa ggcgcgaaaa tcgagcgttt ctatccgaat gcggcggaaa
     6421 accaaggcta ccgtttccac gaagaagaca cgcatatcat catgaaagtg gaaacgcaca
     6481 accacccgac cgccatcgcg ccgtttgcgg gcgcggcgac gggtgcgggc ggcgaaatcc
     6541 gcgacgaagg cgcgacgggc aaaggttcgc gcccgaaagc aggcttgacc ggctttaccg
     6601 tctccaacct caacatcccc gacctcaaac agccttggga acaagcctac ggcaaacccg
     6661 accatattgc ttccccttta gacatcatga tcgaaggccc catcggtggc gcggcgttca
     6721 acaacgaatt cggacgcccc aacctcttgg gctacttccg cacctttgaa gaaaaatttg
     6781 acggtcaggt tcgcggctac cacaaaccga ttatgattgc gggcggcttg ggcagcattc
     6841 aggcgcagca gacgcataaa gacgaaatcc ccgaaggcgc gttgctgatc caactgggcg
     6901 gcccgggtat gcttatcggc ttgggcggcg gcgcggcttc ttcgatggat accggtacaa
     6961 acgacgcttc tttagacttc aactccgtgc aacgcggcaa ccccgaaatc gaacgccgcg
     7021 cgcaggaagt catcgaccgc tgctggcagc tcggcgacaa aaacccgatt atctccatcc
     7081 acgacgtggg cgcaggaggt ttgtccaacg ccttccccga actcgtcaac gatgccggac
     7141 gcggcgcggt attcaagttg cgcgaagtgc cgttggaaga acacggttta acgcctttgc
     7201 aaatctggtg caacgaatcg caagagcgtt atgtgttgtc gattttggaa aaagatttgg
     7261 atgccttccg cgccatctgc gaacgcgaac gctgcccgtt tgccgtagtc ggcacggcga
     7321 ccggcgacgg ccatttgaaa gtacgcgacg atttgttctc caacaaccct gtcgatttgc
     7381 cgttgaacgt tttgctcggc aaaccgccca aaaccacgcg caccgacaaa acggttacgc
     7441 cgtatgcgac cgaagggaat ccctttggga aaaaaccgtt taatgccggc gatatcgaca
     7501 ttaccgaagc cgcctaccgc gttctgcgcc tgcctgccgt agcggctaaa aacttcctga
     7561 ttaccatcgg cgaccgcagc gtcggcggca tgacccaccg cgaccaaatg gtcggcaaat
     7621 accaaacccc cgtagccgac tgcgccgtga ccatgatggg cttcaacacc tatcgcggcg
     7681 aagcgatgtc tatgggcgaa aaaccggccg tcgccctgtt tgacgcgcct gcttcgggca
     7741 gaatgtgtat cggcgaagcc atcaccaaca tcgcagcggt caacatcggc gacatcggca
     7801 atatcaaact ttctgccaac tggatggcgg cgtgcggcaa cgaaggcgaa gacgaaaaac
     7861 tctaccgcac cgtcgaagcg gtttccaaag cctgtcaggc attggatttg agcatccccg
     7921 tgggcaaaga cagcctgtcg atgaaaaccg tttggcagga tggcgcggac aagaaatccg
     7981 tcgtctcgcc attgagcctg attatctccg cgttcgcgcc ggtggaagac gtacgcaaaa
     8041 ccgttacgcc cgaactgaaa aacgtcgaag acagcgtatt gctgtttatc gatttgggct
     8101 tcggcaaagc gcgtatgggc ggctcggcgt ttggtcaggt gtacaacaat atgagcggcg
     8161 acgcgcccga tttggacgat acaagtcgtc tgaaagcgtt ttacaacgtg attcagcagc
     8221 ttgtcgccga agacaaactc ttggcgtatc acgaccgcag cgacggcggt ttgtttgccg
     8281 ttttggtaga aatggcgttt gcggggcggt gcggcttgga tatagattta aatttattgc
     8341 ttgcacaaac atttattacc aaccataccg ctctgtctca atcattgcgg actgaagagg
     8401 taaaagcgtt ggctgaatgg caagaaacca ttgcccgcac attatttaat gaagagttgg
     8461 gtgctgttat ccaagttaga aaacaagatg ttgccgatat tatcaattta ttctatcaac
     8521 aacagctgca tcataatgtc tttgaaatcg gtacgttaac tgatgagaac acgttaatca
     8581 tccgcgacgg gcaaacgcac cttatttctg acaacctaat caaactgcaa caaacctggc
     8641 aagaaaccag ccatcaaatc caacgcctgc gcgacaaccc tgcctgcgcc gacagcgagt
     8701 ttgccctgat tggcgacaac gaacgcagcg cattgtttgc cgacgtgaag ttcgacgtga
     8761 acgaagacat cgccgcgccg tttatcaaca gcggcgcgaa acccaaaatc gccatcctgc
     8821 gcgaacaggg cgtaaacggg caaatcgaaa tggccgccgc gttcactcgc gccggtttcg
     8881 atgcctacga cgtgcatatg tccgacctga tggcaggccg cttccgcctt gccgacttca
     8941 aaatgctggc ggcgtgcggc ggcttcagct acggcgacgt actcggcgcg ggcgaaggct
     9001 gggcgaaatc catcctgttc caccctgcct tgcgcgacca atttgccgcc ttctttgccg
     9061 atccggacac gctgacattg ggcgtgtgca acggctgcca gatggtcagc aacctcgccg
     9121 agattatccc gggtgcagag gcatggccta aattcaaacg caacctgagc gaacagtttg
     9181 aagcacgcct gagcatggtt cacgttccga aatcagcgtc gctgattctg aacgaaatgc
     9241 aaggctccag cctgcctgtc gtggtcagcc acggcgaagg ccgcgccgac ttcgcgcttc
     9301 acggcggcaa tatttccgcc gatttgggca tcgcgctgca atatgtggac ggtcaaaacc
     9361 aggttaccca aacctatccg ctcaacccca acggctcgcc gcaaggcatc gccggcatta
     9421 ccaacgccga cggccgcgtg accatcatga tgccccaccc cgaacgcgtg taccgcgccg
     9481 cgcaaatgag ctggaaaccg gaaggctgga cggaactgtc cggctggtac cgcctctttg
     9541 ccggcgcacg taaagccttg ggctaaccgc cctactcaaa ccaatgccgt ctgaagaata
     9601 tttcagacgg cgttccggca taccatcctt taaacggtat ccgtccaccg aggaacactc
     9661 atgaaaatca cccccgtcaa agccctaacc gacaactaca tctggatgat acagcacggc
     9721 aaccatgccg tctgcgtcga cccttccgaa ccctcgcccg tcttagaatt cctcgtccgc
     9781 aaccgcctca tgcttgccca aacatgggta actcaccccc accccgacca cgagggcggt
     9841 gcggcggcac tctggcgcgg ctacatggaa tcgcccgttt acggcgaatc cgacatcgaa
     9901 gcagcaaccc acaccgtaac cgccggcacc caattcacct tcggcgacgg acaggttacc
     9961 gtttgggcaa cacccggcca cacagaccgc cacaccagct accttctcga aacttcagac
    10021 ggcatacacg tcttttgcgg cgacaccctt ttttccgccg gctgcggacg cgtgtttacc
    10081 ggcacaatcg aacagcttta cgacagcttc caacgcttca accgcctgcc tgaaaacacc
    10141 ctgttctacc cggcacacga atacaccgcc gccaacctgc gtttcgccgc ccatatcgag
    10201 ccggacaacg ccgacattca gacggcactg aaagcggcgg cgcatacgcc taccctgccc
    10261 gttaccctcg cgcacgaacg ccgcgtcaat ccgtttttgc gcgtcgacct gccgcacgtc
    10321 agagaccgcg ccgaggcatt gagcgggaaa acgttaaaca gcagcctcga tacctttgtc
    10381 gcgctgcgtg aacttaaaaa ccaataccgg acgaaataaa acaatgggaa aacgcagcca
    10441 ttcctaggat ttttattaaa atcttaaata aaatcataca atcatcgcca atagacgaaa
    10501 ggacaccgtt gccttataat caaacaaaaa caaaatatat aatatagtgg attgaattta
    10561 aatcaggaca aggcgacgaa gccgcagata gtacggcaag gcgaggcaac gctgtactgg
    10621 tttttgttaa tccactatat tgttaatcca ctatataaat ccagcacaaa acgggatcgg
    10681 tgattcttgt ccgcaagaat cgttgatttt ctctattaca cggataatca tcatgcgctt
    10741 cacacacacc accccatttt gttccgtatt gtccaccctc ggtctttttg ccgtttcccc
    10801 tgcttactca tccattgtcc gcaacgatgt cgattaccaa tattttcgcg actttgccga
    10861 aaataaaggc gcgttcgccg taggtgcaag caatatttcc atccaagaca agcaaggcaa
    10921 aatattaggc agggttctca acggcatccc catgcccgac ttccgagtca gcaaccggca
    10981 aaccgccatc gccaccctga ttcaccccca atacgtcaac agtgtcaaac acaacgtcgg
    11041 ctacggttcc atacaattcg gcaacgacac ccaaaatcca gaagaacaag cctataccta
    11101 ccgcctcgta tcacgcaacc cgcacccgga ctacgactac caccttcccc gcctcaacaa
    11161 actggttacc gaaatctcac ctgccgcact cagcagcgta cccttgcttg gaaacggcca
    11221 gccaaaggcc aatgcctacc tcgataccga ccgcttccca tactttgtac gactcggctc
    11281 aggcacgcaa caagtccgca aagcagacgg cacgcgtaca cgaaccgccc cggcatacca
    11341 atacctgacc ggcggcacgc cgctgaaagt attggggttc caaaaccacg gcttactcgt
    11401 cggcggcagc ctgaccgacc aaccccttaa cacctacgca atcgccggag acagcggttc
    11461 ccccctgttt gccttcgaca agcatgaaaa ccgctgggtg cttgcgggcg tactcagcac
    11521 ctacgccggc ttcgataact tcttcaacaa atacatcgtc acgcaacccg aattcatccg
    11581 ttccaccatc cgccaatacg aaacccggct ggatgtcggg ctgaccacca acgaactcat
    11641 atggcgcgac aacggtaatg gcgacagcac cctgcaaggg ctcaacgaac gcatcaccct
    11701 gcccattgca aacccttcgc ttgccccaca aaacgacagc aggcacatgc cgtctgaaga
    11761 tgccggcaaa acgctcatcc tatccagcag gttcgacaac aaaacactga tgctggcaga
    11821 caatatcaac caaggcgcag gcgcattgca gttcgacagc aacttcaccg tcgtcggtaa
    11881 aaaccacaca tggcaaggtg caggcgttat cgtagccgac ggcaaacgcg tcttctggca
    11941 agtcagcaac cccaaaggcg accggctctc caaactgggc gcaggcacgc ttatcgccaa
    12001 cggacaaggc atcaaccagg gcgacatcag catcggggaa ggcactgtcg tactcgccca
    12061 aaaagctgct tcagacggca gcaaacaagc attcaaccaa gtcggcatca ccagcggcag
    12121 gggcacggcc gtcctcgccg acagccagca aatcaaaccc gaaaacctct atttcggctt
    12181 caggggcgga cggctcgacc tcaacggcaa caaccttgcc tttacccata tccgccatgc
    12241 ggacggcggc gcgcaaatcg tcaatcacaa ccctgaccaa gccgcgacac tgacgctgac
    12301 cggcaacccc gtcctcagtc ccgagcatgt cgagtgggtg caatggggca accgtccgca
    12361 aggcaacgcg gcggtttacg aatacatcaa cccgcaccgc aaccgtcgga ccgactactt
    12421 catactcaaa cccggcggca acccgcgcga atttttcccg ttaaatatgg aaaactcaac
    12481 aagctggcaa tttatcggca acaacaggca acaggccgcc aaacaagtcg cccaagccga
    12541 aaatgcccgc cccgacctga ttaccttcgg cggatacttg ggtgagaacg cgcaaacggg
    12601 taaagccgca ccgagttaca gcaaaaccaa tatcgaatgg gtgaatagtc caaacacccc
    12661 acacaagccc tcgccctata cgaatacgcc aacccgcaca ggggcaggcg taccgacgat
    12721 taccgcctca aagaaggcgg caaccccggc gcctacttcc catgggatgc ctacagcacc
    12781 caagactggg aatttctcgg acataaccgg cgaagcagcc atagaaaaaa accgccatat
    12841 cgcaaatgcc gccgtatacg gccggcccga ataccgttac aacggcgcac tcaacctgca
    12901 ctatcgtccc aaacgcaccg acagcacgct gttgctcaac ggcggcatga accttaacgg
    12961 ggaagtcttg attgagggcg gcaatatgat tgtgtcaggc aggcccgtac cccatgccta
    13021 cgaccaccag gccaaacgcg aacccgttct tgaaaacgaa tggaccgacg gcagcttcaa
    13081 ggctgcacgg ttcaccctac gaaaccatgc ccgactgaca gcagggcgca ataccgcgca
    13141 tctggacggc gacataaccg catacaatct gtccggcatc gacctcggct ttatccaagg
    13201 caaaacaccg gaatgctacc gctcctacca tagcggcagc acccactgca cacccaacgc
    13261 cgttttaaaa gccgaaaact atcgtgcact acctgtaacg caagtacgcg gcgacattac
    13321 ccttaacgac cgttcagagc tccgcctggg caaagcacac ctgtacggca gcatccgtgc
    13381 cggcaaagac accgcagtcc gcatggaagc agacagcaac tggacacttt cccagtccag
    13441 ccacaccggc gcactgacgc ttgacggcgc acaaattacc ctgaaccccg atttcgccaa
    13501 taatacacac aacaaccgct tcaacacact gaccgtcaac ggcacacttg acgggttcgg
    13561 cacattccga ttcctgaccg gcatcgtccg aaaacaaaat gccccccccc tcaaactgga
    13621 aggggacagc cgcggcgcat tccaaatcca cgtcaaaaac accggacaag aacctcaaac
    13681 aaccgaatcg cttgcacttg tgagcctcaa tccgaaacac agccaccaag cccgatttac
    13741 cctccaaaac ggctatgccg atttgggtgc ctaccgctac atcctccgca aaaacaacaa
    13801 cggatacagc ctgtacaacc cgctcaaaga ggccgaactt caaattgaag ccacgcgtgc
    13861 ggaacatgag cgcaaccaac aggcatacaa ccaattacag gcaaccgaca tcagcagaca
    13921 ggttcaacat gactctgacg cgaccaggca ggcactacag gcctggcaga acagtcaaac
    13981 cgaacttgcc cgcatcgaca gccaagtcca atatctgtcc gcccaattga aacagacaga
    14041 cccgctgacc ggcattctga cgcgtgccca aaacctgtgt gccgcacaag gatacagtgc
    14101 cgatatctgc cgtcaggttg ccaaagccgc cgacacgaac gacctgacac tcttcgaaac
    14161 cgaactggat acgtatatag aacgtgtaga aatggccgaa tccgaacttg acaaagcacg
    14221 gcaaggcggc gatgcgcaag ccgtcgaaac agcccggcac gcctacctga acgcactcaa
    14281 ccgtctgtcc cgacaaatcc acagtttgaa aaccggcgtt gccggcatcc gtatgccgaa
    14341 cctggccgaa ctgatcagcc ggtcggccaa caccgccgtt tccgaacagg ccgcctacaa
    14401 taccggccgg caacaggcgg gacgccgcat cgaccgccac cttaccgatc cgcagcagca
    14461 aaacatctgg ctggaaaccg gtacgcaaca aaccgactac catagcggca cacaccgtcc
    14521 ctaccaacaa actaccaact atgcacatat cggcatccaa accggcatca ccgaccgtct
    14581 cagtgtcggt acaattttaa ccgatgagcg cacaaacaac cgttttgatg aaggcgtatc
    14641 cgcccgaaac cgcagcaacg gcgcacatct gttcgtcaaa ggggaaaacg gcgcactctt
    14701 tgccgcggca gatttaggct acagcaacag ccgtacccga tttaccgatt atgacggggc
    14761 tgccgtccgc cgccacgcat gggatgcagg catcaacacc ggcatcaaaa tcgataccgg
    14821 catcaacctc agaccctatg ccggcatccg tataaaccgc agcaacggca accggtacgt
    14881 actcgacggc gcagagataa acagcccggc gcaaatccaa accacatggc atgccggcat
    14941 ccgtctcgat aaaaccgtcg aactgggtca agccaagctg acccccgctt tcagcagcga
    15001 ttaccaccat acccgccaaa acagcggttc cgccctcagc gtcaacgacc gtaccttact
    15061 gcagcaagcc gcccacggca cactgcatac cctgcaaatc gacgccggat acaaaggctg
    15121 gaacgccaaa cttcatgccg cttacggcaa agacagcaac accgcccgcc acaaacaggc
    15181 aggaatcaaa ataggctaca actggtaaca agccgataaa aatgccgtct ggaacccgcg
    15241 tttcagacgg catttgcgtt aaaaatagta aaccgttcca aaagggagta gaatagtgcc
    15301 gtttccaacc ctgcgcctgt accgtcaggc ttttattatg gaccttccca gttcgttttt
    15361 actgaacacc ccttccgatt ccaaacgaca ataaccatcc cgccggaatg cctccccgcg
    15421 cacggcgggc ggagcattta tgagcatcga accaacccct ccgaaccttg aaaacgacgg
    15481 tatcgaaaac gatgtagaac gcgtttccgc cgatttcgac cgtgtccact ccctctgcga
    15541 aatcctcgaa cctgcttttg aacaaatcga aaacggcaca ccgctcgaag acgcgtcgct
    15601 gcgcgacaag ctgaccgagc tgaccgtcct cttgagcgag ctgcaccctg ccgacgtggc
    15661 ggcggtattg gaatcgctgc cgccgcgcga acgcaatatc gtctggattc tggtcaaacc
    15721 ggaagacgac ggcgaagtct tgctggaagt gtccgacgcg gtgcgcgaaa cgctgatcga
    15781 gtcgatggac aaagacgaat tgttggcggc agttgacgat ttggacgcgg acgaattggc
    15841 ggaactggca gacgatttgc cgcaccaagt ggtttacgaa gcgctacaaa cccgcgatga
    15901 ggaagaacgc gcccaagtca aagcggcaat gtcctacgaa gacaaccaag tcggtgcgat
    15961 tatggacttc gagttggtca gcatccgcgc cgatgtcgcc tgcgaagtgg tgctgcgtta
    16021 cctgcgccgc ttcgacagcc tgcccgacca taccgacaag atttttgtcg tcgatgaaaa
    16081 cgacgtgctg caaggcgtgc tgcccatccg caaacttttg gtcgccgacc ccgaagactt
    16141 ggtggaaaac gtgatggcga aagatgtcgt gcgtttccgc gccgaagacg acgtggaaga
    16201 agcggcgcag gcgtttgaac gctacgactt ggttaccgcg cccgtcgtcg atgaaaacaa
    16261 aaagctcatc ggcaggatta ccatcgacga gatggtggac gtgatccgcg aagaatccga
    16321 agcggatatg ttgaacatgg caggtttgca ggaagaggaa gacctgttcg cccccgtctt
    16381 ggattccgtc aaaaaccgct ggatgtggct cgccatcaac ctctgcaccg ccttccttgc
    16441 cagccgcgtc atcggcgcgt ttgaaggcag catcgaaaaa atcgtcgcac tcgccgcgct
    16501 gatgcccatc gtcgccggca taggcggcaa ctcgggcaac cagacgatta ccatgattgt
    16561 ccgcgcgatg gcgatggggc aactgacagg catgcaggcg gggcgcttgt tgaaaaaaga
    16621 agtcggcgtt gccctagtca acggcattat ctggggaacc gtcatgggcg cggtttcatg
    16681 gctgctctac ggcagcctcg gcatcgggct ggttatgatt gccgcgatga cgctcaacct
    16741 cctgctggcg gcaaccgtcg gcgtattaat tcccgtggta atggaaaagt tcggacgcga
    16801 tcccgcactg ggcagctcgg tgctgattac cgccgttacc gactccggcg gcttcctgat
    16861 tttcttgggg ctcgccaccc tattcctgct ttaaatgccg tctgaacccg cgcaaaaatg
    16921 ccgtctgaag cggaagctgc ttcagacggc atttgactat ttatccttgt tgcacaagat
    16981 tattggacgg tatgccgggg cagccctttg gcaacgccga ccacatcctc cccgaacagc
    17041 gcgttgacat cggtttcgtc aaacacatat ttgctgtggc agaaatcgca atcgacttcg
    17101 atgctgcctt gttccaccac cacgccgccg acttcttccc cgcccagcat caacagcata
    17161 tcgctgactt tgccgcgcga acaggtgcat gaaaattcaa acgtttccgg ctcgaacacg
    17221 cgcggcggcg tttcgtggaa caggcggtat aaaacgtgtt gcgcgtccag tcctgccagc
    17281 tcctccgccg tcagcgtgcg cgccagcgta ctgacgtgtt cccatgcctc ttcatccaat
    17341 acctcttcag gcagacgctg caccagcaga ccgcccgccg cttcgtcgct tgcagacagg
    17401 acgatgtgcg tatcaagctg ttcggaacgt ttcatatagt tcaccaacat ttgcgcgata
    17461 ccgtcgcctt ccaaaggcac tacgccctgc cagggttcgc cgtctttggg ctgcagcgtc
    17521 aatacgaaca cgccgttgcc gcccaaaagg tcgccgaggc tttcgtcatc ggctatttct
    17581 gccgcctcgt cccaccgcgc ggttgcacgg acggtacgat cggaagtcgc ttccgcaacc
    17641 agcattttca gccgcccctg cccctgaacc tgcacaatca gcgtgccttc gtttttgagg
    17701 ttgcccgaca gcagaacacc ggcagccaac agctcgccca aggcgcggcg gatggcggcg
    17761 ggatagtttt tctgttttac aatgtgctgc cacacgtttt ccagacggac gtgcagcccg
    17821 cgcacgggca tatcgtcgaa gataaagcgg gtacgcacat cggcgcggtt gatggcggtt
    17881 tgattcatga ttttctctga ctgattgttc ggatggcggc tatatggttg cggtcggcgc
    17941 gaaaacaaga cggacggcgg atgcgcttcc caaattatca ataaattata taaaaatcaa
    18001 catattaact caatctaaca agccgttttt tgccaaacag ccgttttttt atatacaatc
    18061 aacaagatat tttcgactga tacagcataa catcgcacgg cggcacgatg cctcctgcgc
    18121 ggaaacaccg atatggattc ttttttcaaa ccggcagttt gggcggtttt gtggctgatg
    18181 tttgccgtcc gccccgccct tgccgacgag ttgaccaacc tgctcagcag ccgcgagcag
    18241 attctcagac agtttgccga agacgaacag cccgttttac ccatcaaccg agcccccgcc
    18301 cggcgggcgg gcaatgccga cgaactcatc ggcagcgcga tggggcttaa cgaacagccc
    18361 gttttacccg tcaaccgagt ccccgcccgg cgggcgggca atgccgacga actcatcggc
    18421 aacgcgatgg ggcttaacga acagcccgtt ttacccgtca accgagcccc cgcccggcgg
    18481 gcgggcaatg ccgacgaact catcggcaac gcgatgggac ttttgggtat tgcctaccgc
    18541 tacggcggca catcggtttc taccggtttt gactgcagcg gcttcatgca gcacatcttc
    18601 aaacgcgcca tgggcatcaa cctgccgcgc acgtcggcag aacaggcacg gatgggtacg
    18661 ccggttgccc gaagcgaatt gcagcccgga gatatggtgt ttttccgcac gctcggcggc
    18721 agccgcattt cccatgtcgg actttatatc ggcaacaacc gcttcatcca cgcgccgcgc
    18781 acggggaaaa atatcgaaat caccagcctg agccacaaat attggagcgg caaatacgcg
    18841 ttcgcccgcc gggtcaagaa aaacgacccg tcccgctttc tgaactgatt tcccaaggaa
    18901 tacgcaatga gtatgcccga aatacccaaa tggtacgacg atgacggaca gatcgtgtcc
    18961 tgtaccgaaa agatcaaagt gatgtccgaa aatatggccg agctgtatca gacggcacaa
    19021 gacgcgtttg aagacgcgct gctgatgggt tgcggcgaac gtcagttgcg cgattacctg
    19081 ctcgcgctga ttgaaggttt ggaaaatccc taccgcaaag tctgaacacg ccccggttgc
    19141 tgcggcacgg tttatccgtg ccgtttttgc gtttgtgcgc ggcttcggct tttcagacgg
    19201 catatttgac gttatgatta aacagttaac aagatttatc acaacgccgt caaaagacag
    19261 acacacaaca tgaacatcat ccgcgcgctc ctcatcatcc tcggctgcct cgccgccggc
    19321 gaaaccgccg ttttcctagc aggcatcaaa ctgcccggca gcatcgtcgg catgggcgtg
    19381 ctgtttgcgc ttttgcaggc aggttgggtc aaaacgtctt ggctacaaca gcttaccgac
    19441 gcgctgatgg cgaatctgac gctgtttctc gtgccgccct gcgtggcggt catcagctat
    19501 ttggatttga ttgccgacga ttggttttcg atactggttt ccgcctccgc cagcactttg
    19561 tgcgtactgc tggttacagg caaggttcac cgctggatac ggagcattat ctgatgaacg
    19621 aaatcctcag gcagcccagc gttctgcttt tcctcacgct tgccgtgtac gcgcttgcga
    19681 ttatcgtgcg cacgcgcacg ggcaatatct tctgcaaccc cgtactcgtc agcactatcg
    19741 tgctgattgc ctacctgaaa atcctcgaca tcgattatgc ggtgtaccac aacgccgcgc
    19801 aattcattga tttttggctg aaacccgccg tcgtcgtgct tgccgtgccg ctctaccaaa
    19861 accgccgtaa aatcttcaac caatggctgc ccgtcatcgt ttcacagctt gcgggcagcg
    19921 ttacgggcat tgttacgggg atgtattttg ccaaatggct gggcgcggaa cgcgaagtcg
    19981 tcctctcgct cgcgtccaaa tctgttacca accccatcgc cattgaaatc acccgctcca
    20041 tcggcggcat tcccgccatt accgccgcca ccgtcatcat tgccggtctg gtcggacaga
    20101 ttgccggtta caaaatgctg aagaacacag tcgtcatgcc ctcgtccgtg ggtatgtcgc
    20161 tcggcacggc ttcgcacgcg atggggattg ccgcctcgct cgaacgcagc cgccgcatgg
    20221 cggcatacgc gggactgggg ctgacgttca acggcgtact gaccgcgctg attgcgccgc
    20281 tgctcatccc cgttttggga ttttgaaccc gtttcagacg gcatttcagc ccatgctgtc
    20341 tgaacgccga cacactcgca aggagaaccg ttatggctgt caacctgact gaaaaaaccg
    20401 ccgaacaact gcccgacatc gacggcattg ccctctacac cgcccaagca ggcgtgaaga
    20461 agcccgggca taccgacctg acactgattg ccgtagccgc cggcagcacc gtcggtgcag
    20521 tcttcacgac caaccgtttc tgtgccgcgc ccgtccacat cgccaaatcg caccttttcg
    20581 acgaagacgg cgtgcgcgcc ctcatcatca acacgggcaa cgccaacgcg ggtacgggcg
    20641 cacagggcag aatcgatgct ttggcagtgt gtgccgccgc cgcccggcaa atcggctgca
    20701 aaccgaacca ggtgctgccc ttctccaccg gcgtgattct cgaaccgctg cccgcagaca
    20761 aaatcatcgc cgcgctgccc aaaatgcagc ctgccttctg gaacgaagcg gcacgcgcca
    20821 tcatgaccac cgacaccgtg cccaaagccg cctcgcgcga aggcaaggtc ggcgacaaac
    20881 acaccgtccg cgccacgggc atcgccaaag gctcgggcat gattcatccc aatatggcga
    20941 ccatgctcgg tttcatcgcc accgatgcca aagtttccca acccgtcctc caactgatga
    21001 cgcaggaaat cgccgacgaa accttcaaca ccatcaccgt tgacggcgac accagcacca
    21061 acgacagctt cgtcatcatc gccaccggca aaaacagcca aagcgaaatc gacaacatcg
    21121 ccgacccgcg ttacgcccaa ctcaaagaat tgttgtgcag cctcgcgctc gaactcgccc
    21181 aagccatcgt ccgcgacggc gaaggtgcga ccaagttcat caccgtccgc gtcgaaaacg
    21241 ccaaaacccg cgacgaagcc cgccaagccg cctacgccgt ggcacgttcg ccgctggtca
    21301 aaaccgcctt tttcgcctcc gaccccaacc tcggcaggct gctcgccgcc atcggttatg
    21361 ccggcgttgc cgacctcgat accgacctcg tggaaatgta tctcgacgat attttggttg
    21421 ccgaacacgg cggacgcgcc gcaagctaca ccgaagcaca agggcaggcg gtgatgtcga
    21481 aggacgaaat caccgtccgc atcaagctgc atcgcggaca agccgccgcc accgtctata
    21541 cctgcgacct gtcgcacgga tacgtttcca tcaacgccga ctaccgttcc tgacccgaca
    21601 cggcttcaga cggcatacat atagtggatt aacaaaaatc aggacaaggc gacgaagccg
    21661 cagacagtac aaatagtacg gcaagacgag gcaacgctgt actggttttt gttaatccac
    21721 tataaaatgc cgtctgaacc gccggacaac ataccatgac ctccacattc ccccgccgcc
    21781 tcgcccgcaa aatccgccaa acccgccgcc tgtcgcgcaa aagcatcgcc tttctgttcc
    21841 ttttggcagg ttcggcactc gtcgccctga ccgcgctgtt ttttgcccat cttgccgatt
    21901 ttgcgctgga actgaacgcc aaactggttc aacaataccc gtggttcgcg tgggtcgcgc
    21961 ttcctttggg tttaccgctt attgcgtggc tcacacgcaa attcgccccc ttcaccgccg
    22021 gcagcggcat cccgcaggtc atcgcctcac tgtcgctgcc ctacggcgca cagaaaacgc
    22081 ggctgatccg cctcgggcag acgctgctga agattccgct aacctttttg ggtatgctgt
    22141 tcggcgcgtc catcggacgc gaaggtccgt ccgtgcaggt cggcgcggca gtgatgggcg
    22201 cgtggggcgc gtggtgcaag aaacacggct tggcattcaa agggatgcag gaaaacgatt
    22261 tgatggcggc gggcgcggcg ggcggtttgg cagccgcgtt caacgcgccg ctggcgggcg
    22321 tgattttcgc cattgaggaa ctcgggcgcg gcatcatgtt gcgctgggag aggcaaattc
    22381 ttttgggcgt gctcgcctcc ggtttcatac aggtcgccat tcagggcaac aacccgtatt
    22441 tttccggctt caacggcggc gtattggaac atatctttct gtgggtcgca ctgtccggcc
    22501 tggtttgcgg cgcggcgggc gggctgttcg gacgtttgct ctatcgcggt gcggcggcgt
    22561 ttgcaccgcg caagatacgc ggcttcatcc gcaaccgtcc gctgctgctg gcggcactga
    22621 tggggctgct gctcgccctg ctcggcacgt tctaccaagg caaaacctac ggcaccggct
    22681 accacgaagc cgcccaagcc ctgcacggca tctacgaagc ccccttcgga ctcgccgccg
    22741 ccaaatggct cgccaccgta ttcagctatt gggcaggcgt tccgggcggc attttcactc
    22801 cctcgctgac cataggcgcg gttttgggcg agcatatcgc cgccatcgcc gacatatcgc
    22861 agggtgcaaa catcatcgtc ctcatctgca tggcggcatt tctggcgggc gcgacacaat
    22921 ccccgattac ttccgccgtc gtcgtcatgg aaatgacggg cggacaaagc ctgctgtttt
    22981 ggatgctgat tgcctgcatt ttcgcctcgc aggtttcgcg ccagttttcg ccgcgtccgt
    23041 tctaccacgc atcgggaatg cgcttccgcc agcgcgtgct tcaagaaacc gccgcccaaa
    23101 ccggcaatgc gcccgcaaga ccgcaaacag caaacagcaa aacgggaatg ccgtctgaaa
    23161 attaaaacgc ccccgatcaa acgccggcag ccgccttgat ttgaataccg ttccgccgcc
    23221 gcttgaaatt tcagcaacaa tgccgtctga acgacagaat gcggttttca gacggcattt
    23281 ccacatcccg atattgccta aacaaaaccg aagcgtttgc tataattcta ttttttaccg
    23341 cacacgcacc aatcatgttt cccgatttct cccaaaccct ctccaaagac cgccacttcc
    23401 tacgttccgc cttcaaaaat cccaacaaat acggcgggtt gtccaaagtc gaagaaaaat
    23461 accgaaaatc gcacgaaatc tttttgaaac gtttggcagc cttgcccaaa cccgaattcg
    23521 acaacaccct gcccgttcac gaaaaacttg acgaaatcaa aaaaaccgtt gccgaacatc
    23581 aggtaacgat tatttgcggc gaaaccggtt cgggcaagac cactcagttg cccaagattt
    23641 gtctggaact cgggcgcggg gcggcgggtt tgatcgggca tacccagccg cgccgtttgg
    23701 cggcgcgttc cgtagcagag cggattgccg aagagctgaa atccgaaatc ggcagcgcgg
    23761 tcggctataa agtgcgcttc accgaccaca cctcgcgcga tgcctgcgtc aagctgatga
    23821 ccgacggcat cctgctggcg gaaacccaga ccgaccgtta tctcgccgcc tacgacacga
    23881 ttatcatcga cgaagcgcac gagcgcagcc tgaacatcga cttccttttg ggctatttga
    23941 aacaactcct gccgcgccgc cccgatttga aagtcatcat cacctcggca acgatagacg
    24001 cagaacgctt ttcccaacac ttcaacggcg cgcccgtgct ggaagtgagc ggacgcacct
    24061 atcccgtcga aatcctctac cgaccgctga tcggcaaaga cgaagacgac gcggaaatag
    24121 aattgaccga cgcgattgtc gatgcggcgg acgaattggc gcgatatggc gaaggcgata
    24181 ttttggtatt cctgccgggc gaacgcgaaa tccgcgaagc cgccgaagcc ctgcgcaaat
    24241 ccacgctacg ccgcaacgac gaaatcctgc ccctgttcgc acgcctgtcg cacgccgagc
    24301 agcacaaaat ctttcacccc tccggagcga aacgccgcat cgtgctggca accaacgtcg
    24361 ccgaaacctc gcttaccgtg ccgggcatca aatacgtcat cgacaccggc ctcgcgcgcg
    24421 tcaaacgcta ttccgcacgg gcgaaagtgg agcagcttca tatcgaaaaa atctcccaag
    24481 ccgccgcccg ccaacgctcc ggccgctgcg gacgcgtctc cgcaggcgta tgtatccgat
    24541 tgttttcaga agaaaatttc aacaaccgcc ccgaatttac cgaccccgaa atcgcccgca
    24601 gcaacctcgc cgccgtcatc ctgcgcatgg catcgctgaa actcggcgac gtagcggcat
    24661 tcccattttt agaaatgccc gattcgaggt atattaatga tgggtttcag gtgttgctgg
    24721 aattaggggc agtggaggcc gcctgaaaac aagtaggata tacacttcta cctgacaaag
    24781 accaacaaac gataaaacta cggcacatct agatgcccaa cctacaacat tgcacacggt
    24841 aaaaacatga aacacttact catcgatttt gaaaacgtcc agccgcaaaa cttagacaaa
    24901 ttactaaccg aaaataccca tatttggcta tttataggtg tattacacaa aatgttacct
    24961 attagtctgg tgcaatccct actacgtttc ggcgaacgtg tccatcttgt ccagttacaa
    25021 aaaacgggga aaaacgcatt ggatttttac ctgtcctatt acctcggaca aattaccgcc
    25081 acagacccca atgcccaaat cggcatactc tcgcgtgatg gaggatacga tgttctggtc
    25141 gaacatattt tgaaaaacca ccaggcgaag ggtatcgtgc gcctagccaa tatagatgaa
    25201 gtacaacatc agaaaattac taccgaaccg ccgtcagcat tgctggaaaa cactcctcag
    25261 cctgaaacca ccctcaaacc acagcaacca ttaacttcct atttccaagc agccctaact
    25321 gcactgcgcc gccccgacgc tttccgcccc tgccgcctgc ataacctgcg acaaaatctg
    25381 cgtaagcata ttttgagtga tttgtttaaa gaaaaaaccg atgaagaatg cgaaataacc
    25441 actgctaacg ttatcaataa actcaaagca caaaacttca tcagcattga tgaacaggaa
    25501 accgtttcct accatctcag tgataatgat ttgttacaaa gaatccaacg ccatatttta
    25561 agccaacgtc ccaaaaccta cgctgatttt caagccgtcg tgcaaaaccg agcagatgca
    25621 cttcacttaa cagtcggtac caacgacatt caatcctttg cgcgacattt gcgcgaccaa
    25681 aacctgatcc gccaaaacaa tgggaaaatt gaatatgcac cgtttactga acctaaacca
    25741 cagccaacgc ccaagcagcc taaaaaaacc gcatgggaac ctgatgaaat tatttggaaa
    25801 aaagtgattg ccgcgttatc gttaaagaac cgtcctaata aaaccaaaac tttacgcaat
    25861 acaatccagg cactcacaaa atccaatgca caagaaactg acaaactgct acaacattta
    25921 caagataccc aagtcctacg tattgacggt actaaaattg tgtatatcaa gtaggatggg
    25981 catttatgcc tgacctacaa aaccaaaaac aacctaacac ccttaatcaa ctccacaaac
    26041 ccttttcaga caacctcgtt ttttgaaaaa caatctgtaa acagataact gctgaagaat
    26101 accgttgccg agccccaaaa cctgcctgca acttttattg tgaactgccc attatgaaaa
    26161 aatccctttt cgttctcttt ctctattcat ctctacttac cgccagcgaa atcgcctatc
    26221 gctttgtatt cggaattgaa accttaccgg ctgcaaaaat ggcagaaacg tttgcgctga
    26281 catttgtgat tgctgcgctg tatctgtttg cgcgttataa aacttcgcgg ctgctgattg
    26341 cgctgttttt cgcgttcagc attattgcca acaatgtaca ttatgcggtt tatcaaagtt
    26401 ggatgacggg tattaactat tggctgatgc tgaaagaggt taccgaagtc ggcagtgcgg
    26461 gcgcgtcgat gttggataag ttgtggctgc ctgcgttgtg gggcgtggcg gaagtcgtgc
    26521 tgttttgtag ccttgccaag ttccgccata agacgcattt ttctgccgat atattgtttg
    26581 ccttcctaat gctgatgatt ttcgtgcgtt cgttcgacac gaaacaagag cacggtattt
    26641 cgcccaaacc gacatacagc cgtatcaaag ccaattattt cagcttcggt tattttgtcg
    26701 gacgcgtatt gccgtatcag ttgtttgatt taagcaaaat ccctgtgttc aaacagtctg
    26761 cgccaagcaa aatcgggcag ggcagtgttc aaaatatcgt cctgattatg ggcgaaagcg
    26821 aaagcgcggc gcatttgaaa ttgtttggct acgggcgcga aacttcgccg tttttgaccc
    26881 agctttcgca agccgatttt aagccgattg tgaaacaaag ttattccgca ggctttatga
    26941 cggcagtatc cctgcccagt ttctttaacg tcataccgca tgccaacggc ttggaacaaa
    27001 tcagcggcgg cgataccaat atgttccgcc tcgccaaaga gcagggctat gagacgtatt
    27061 tttacagtgc tcaggctgaa aaccaaatgg caattttgaa cttaatcggt aagaaatgga
    27121 tagaccatct gattcagccg acgcagcttg gctacggcaa cggcgacaat atgcccgatg
    27181 agaagctgct gccgctgttc gacaaaatca atttgcagca gggcaggcat tttatcgtgt
    27241 tgcaccaacg cggttcgcac gccccatacg gcgcattgtt gcagcctcaa gataaagtat
    27301 tcggcgaagc cgatattgtg gataagtacg acaacaccat ccacaaaacc gaccaaatga
    27361 ttcaaaccgt attcgagcag ctgcaaaagc agcctgacgg caactggctg tttgcctata
    27421 cctccgatca tggccagtat gttcgccaag atatctacaa tcaaggcacg gtgcagcccg
    27481 acagctatct cgtgccgctg gtgttgtaca gcccggataa ggccgtgcaa caggctgcca
    27541 accaggcttt tgcaccttgc gagattgcct tccatcagca gctttcaacg ttcctgattc
    27601 acacgttggg ctacgatatg ccggtttcag gttgtcgcga aggctcggta acgggcaacc
    27661 tgattacggg tgatgcaggc agcttgaaca ttcgcgacgg caaggcggaa tatgtttatc
    27721 cgcaatgagt ggcgtaaaaa ccaataaaga caaattaaga tgatgtcggg gaagatgccc
    27781 gaccgacaag actatgcaaa atatgaaaaa ccaagtacgc ggatcaggca tggatgcacg
    27841 atccaatccg gccaatgttt cagacggcct gcaaaacagt tcgagccata tcggtaccaa
    27901 cacgcgctac cgcctgacca agctcggcga acaaatggcg cgcctgccca tcgacccgaa
    27961 aatcgcgcgc attttgctgg cggcgaagaa acacgactgt atggcggaaa tattggtgat
    28021 tgcgtccgcg ctgtcgattc aagacccgcg cgagcggccg ttggaagcgc gcgatgctgc
    28081 ctccaaggca cacgaacgtt ttaccgacaa gcagtccgat ttccttgcct atctgaacat
    28141 ttgggacagc ttccagcgtg agcgcgacaa aggtttgtcc aacaagcagc tggtgcagtg
    28201 gtgccgccaa tatttcttgt cgcacctgcg gatgcgcgaa tggcgcgagc tacaccacca
    28261 gcttgcccaa actgcgattg aaatgggttt gaccaccaaa gaagccgctt tcagacgttc
    28321 tcccgaagtc aggcagctca cgtcgtctga aaatgcaggc gaccaagacc tatccgccaa
    28381 actcaaacaa aaacaactgg ataagaaaca acaccgcgcc caaatccgcg ctgccaaaga
    28441 agcgggctac gaacaaatcc accgcgccct gctcaccggc ctcatcgcca acgtcggcat
    28501 gaaatcaccc gacggcaacg actacaccag cacgcgcggc agccgcttcc accttttccc
    28561 cgcctccgcc ctgttcaagg cgaagcccaa atgggtgatg gcggcagaac tcgttgaaac
    28621 gacaaaactt tatgcccgcg acgtagccgc catccagccc gaatggatcg agcaggaagc
    28681 gccgcacctc gtccgctacc actatttcga gccgcattgg gaacaaaaac gcggcgaagt
    28741 catcgccagc gaacgggtaa cgctctacgg cctgaccgtc ctgccgcgcc gccccgtgtc
    28801 ctacggcaga atcgcccccg aagaagcgcg cgaaatcttt atccgcggcg cattggtggc
    28861 acaggaatgc gatttgaaag cggacttttt tgtccacaac aaaaagctga ttaaagaaat
    28921 taccgaactc gaacacaaat cgcgcaagca agacgtgctg gtcgatgacg aagccctgtt
    28981 tgcgttttat aacgaacgac tgcccgaaat ggcttggaaa gacgcgcaag gcagcgtttg
    29041 gggaagtgaa gattccgtac ggattattga atctgacaaa gccgagaggt cgtctgaaaa
    29101 tgagcgcaac gagtttcgta aaaacaagcg taatgggtct cgccaaaatg aaaatcacgg
    29161 caacaccgta ggttgggttg aaaacccaac atcagccgca actgcaaaaa ctgttgggtt
    29221 tgacaaccca acctacgcta ctcagcaacc caccccctcc cccgagaggg agggtcgggg
    29281 agagggcaaa acagttgccg cacaaaccaa cttttccgca accgcagcaa accctctccc
    29341 gcaggagagg gaacagagtg cctcagcttc aacgttttca gacgacctgc gtcctgcaaa
    29401 tctgcagcaa accgccccct cccccgtggg ggagggctgg ggagagagca aaacagttgc
    29461 cacccaaacc aacttttccg caacctcaac actttcagac gaccccaaac ccaaaaagca
    29521 gcctgcacct caaaaaggcc gtctgaaacc cctacccctc gccgacatcc gcaccttcca
    29581 agcctggctc aaaaccgccg agtgcgacaa tccgcgcctg ctgttcctca gccgcgacga
    29641 tctgatgcaa cacgccgccg cacacattac cgaagaacag ttccccaaat tctggcaaac
    29701 cgcagacggc aaattcaaac tttcctaccg cttcgagccg caccacccgc tcgacggcgt
    29761 taccctcacc ctgccgctta ccgtgctcaa ccgcatcagc cccgccgccc tcgaatggct
    29821 cgtgcccggt atgttgcgcg agaaaatcca gctgctgatt aaagcactgc ccaagcaaat
    29881 ccgccgcatc tgcgtgcccg tgcccgaatt catcacccaa tttttaagcc aaaaccccga
    29941 ccgcaacgcc cccatcctgc cccaactcgc ccaagccatc gccaaaaccg caggcgacat
    30001 ccgcatattc gagcaaatca accaagacga atgggccgcg ttcaggctgc ccgaacactg
    30061 ctatttcaac ctccgcatca tcgacgacgg cggacaagaa ttagccatag ggcgcgattt
    30121 aatccaaatc caacaacaac tcggccaagc cgccgccgtt accttccgcg acaacaccca
    30181 agaattcgag cgcgacaacg tgaccacatg ggacatcggc atcctgcccg aatccatcaa
    30241 attcgcacgc ggcaaacaac agcttaccgg ctatctcggc ctgcaaaaag aaaaagacgg
    30301 ccgcatcgcc ctgcgcctgt tcgacacaat agaagccgcc gaacaggcac accgtcaagg
    30361 cgtgatagaa ctcatgaaac tacaactaaa agaacaagtt aaagacctga acaaaggcat
    30421 ccaaggcttc acccaagccg ccatgctgct caaacacatc aacgccgaca ccctgcgcga
    30481 cgacctcacc caagccgtct gcgaccgcgc ctttatcggc gaagacgagc tgccgcgtaa
    30541 cgaaaaagcc tttaaagagc aaatcaaacg cgcccgcagc cgcctgcctg ccgtcaaaga
    30601 agccctcagc cgctacctgc aggaaaccgc agccgcctac gccgaactca acagcaaact
    30661 cggcaaacac ccattgaccc acctcctacg ccaacgcctg caaaccctgc tcgccgccgg
    30721 cttcgccacc cgcaccccgt gggcacaatg gccgcgcctc cccatctacc tcaaagccat
    30781 gaccctgcgc ctcgaaaaat acagcagcaa ccccgcccgc gacgcagccc gcgaagccga
    30841 tatccaagag ctggaacaaa tgtggcagga aaaaaacgac ggtttggtga aacaaggaca
    30901 acccatttca gacaacctag ccgcgtttaa atggatgatt gaagaattga gagtgtcact
    30961 gttcgcacag gaattgaaga caccgtatcc agtgtcggtg aagaggttgt taaaagagtg
    31021 ggagaaaatt ttttaactga ataattctgc cgatcaaaat ttcttgacaa aacaaatttt
    31081 aatgaatact ataagtagca ttatgagttt agaaaatttt caattaataa aaacacaatt
    31141 aggtgttccc agttatgaaa atgatagagt tgcaatctat caaggagatt gtatccagtt
    31201 aatggataag atttcaaaag gatcattcca aatgacaatc acatctccac catacaatat
    31261 tggtaaagaa tatgagtcta ttttagattt ggaacattat cttgagtggt gtgaaagatg
    31321 gatgcaatca atacatcact taactgaaga tagcggatgt ttttggttaa atttaggata
    31381 cttacatgtt gaaaaaaagg gactagcagt tcctattcct tatcttttat gggataaaac
    31441 taactttttc cttttacaag aggtggtttg gaattatgca gctggagttg catgccgtaa
    31501 tcgattttcc ccaagaaatg aaaagttatt atggtatgtg aaaaatcctg ctaaatatac
    31561 attcaattta gatgctgtac gcgatcccaa cgttaaatat ccaaatcaga aaaaaaatgg
    31621 gaaattaaaa tgtaatcctc taggaaaaaa cccaacggat gtttggcaaa tagcaaaagt
    31681 cacttctgga agaaataggt catcgagaga aagaactgct catcctgccc aatttccatt
    31741 ggaattaata gaaagaataa tccgagcaag tagcaatcaa aatgatgtaa tcttagatcc
    31801 atttatcggc tcaggaacaa ccgccttagc cggactaaaa aacaaccgtt ttgtcatagg
    31861 atttgaaatt aacgatgagt atatagatat tataaaagaa cgcttcaaag agtatgatct
    31921 tcaaaatact tgatacttgt atataacggt atagaggata gaccctcctc tatactgtat
    31981 ttacaatatt tatttttgat aaagtatttt tagtttactt ctataagcct ctggagagag
    32041 cctcgcctgc tggcctgtcg ctgcagtttg agcaatccaa tccgtatgat ctaaccaacc
    32101 aaatctgata attttaattt ctggacgcaa ttttaaatca ggcataaatt tttcaaaatt
    32161 tatagttaga taataaccat ttttactctt accagtaatt ccatcttgtg gttgtgcata
    32221 actcctatta ccaaatatat attttggatc cgatgaagtt tttaattcta ttgagtaata
    32281 gtcgtcttta atatatacaa tatctttgtc atatttattc ttttctcctt gccaattttc
    32341 aaatctagcc tcaatattag caggaattaa agcatgtaat aacgccccta caatctgagg
    32401 agaaggaaaa aaatttttgc caatttgcaa attaccaatt ctagacgaga aaatattttc
    32461 ccaactatct aaacaaagtt ggacaatctc tttttctgac aatggatgct gcttaatcag
    32521 ctcttctgtt ttggaaatcc ataactcctc attcaaagaa gcatacggcg atatttttga
    32581 tctattcata ttatttaatc ccttctacaa gttcagaaat attaattgaa aaagacttag
    32641 ctaacagcga gatattcaaa agacttatat ttctttctcc gcgttcaact gatccaatat
    32701 aagtacgatg taatccaact ttttctgcta attcttcttg tgaccaacca ttaagtaaac
    32761 gataatgttt tacacgctta ccaaactcaa ctaattcatt ttccataatc tgtattattt
    32821 taataagtga atactttaag tctacactct ataagtagca cacttaacaa accatatcct
    32881 actgcgtgaa taccatagca aactgtagcc tgcatcaaac cgcgtgcatg ccttcgggca
    32941 cacactcggt ctttctaaac cactccccct ttccacccaa accaaaggtc gtctgaaacc
    33001 cattttcaga cgaccttttg ccactttgca aagcaagtat tcccaccacc ctctccccaa
    33061 atatcgccca aaccagtaaa cttcccatat ttcaacaact tcttgaaagc caaccatgtc
    33121 cggtatctac ctaccccacc tatttccgcc ccatatcgcc gaacgcggcc ttttgtattt
    33181 tcagcagggc aaggttcgcg atgtccgaaa aacttccgcc gggcgttatc gggcctagcg
    33241 ctgtttgctg ccggcggtct gaataatggt ggcgtcaacg acggcagcgg atgctttctc
    33301 tacttttagg tttttttcgg tcagttggcg gttaatcagt ttgagcaatt cggacagggt
    33361 gtcgtcttgc gccagccagt tgcggtaacg gcataaggtg ctgtaatcgg ggatgctcag
    33421 ttcgtcaaag cggcaaaaca ggttgaagtc gatgcgggtg atgaggctgt gctcgagttc
    33481 gggatcggag aggctgtgcc attgtccgag cagaacggct ttgaacatgg acaacagcgg
    33541 gtaggcggga cgaccgcggt ggtctcggag gtaacgggtt ttttgacggt tcaggtattg
    33601 ttcgatcggt tgccaatcaa tcacctggtc caacttcaat agtgggaaac gg
//
LOCUS       DAWITQ010000006        29752 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.006, whole genome shotgun sequence.
ACCESSION   DAWITQ010000006 DAWITQ010000000
VERSION     DAWITQ010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 29752)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29752)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29752
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.006"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(213..860)
                     /locus_tag="WIX18_000267"
     CDS             complement(213..860)
                     /locus_tag="WIX18_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF799 domain-containing protein"
                     /protein_id="HEZ5237429.1"
                     /translation="MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPL
                     NESPDVNGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKLHQ
                     IFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSASIREGSNNSN
                     SGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSHNGILKGPRFVEEQPK"
     gene            complement(857..1225)
                     /locus_tag="WIX18_000268"
     CDS             complement(857..1225)
                     /locus_tag="WIX18_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4810 domain-containing protein"
                     /protein_id="HEZ5237430.1"
                     /translation="MNPKTLSRLSLCAAVLALTACGGNGQKSLYYYGGYPDTVYEGLK
                     NDDTSLGKQTEKMEKYFVEAGNKKMNAAPGAHAHLGLLLSRSGDKEGAFRQFEEEKRL
                     FPESGVFMDFLMKTGKGGKR"
     gene            complement(1235..1906)
                     /locus_tag="WIX18_000269"
     CDS             complement(1235..1906)
                     /locus_tag="WIX18_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HEZ5237431.1"
                     /translation="MKTVSTAVVLAAAAVSLTGCATESSRSLEVEKVASYNTQYHGVR
                     TPISVGTFDNRSSFQKGIFSDGEDRLGSQAKTILVTHLQQTNRFNVLNRTNLNALKQE
                     SGISGKAHNLKGADYVVTGDVTEFGRRDVGDHQLFGILGRGKSQIAYAKVALNIVNVN
                     TSEIVYSAQGAGEYALSNREIIGFGGTSGYDATLNGKVLDLAIREAVNSLVQAVDNGA
                     WQPNR"
     gene            complement(2071..2790)
                     /locus_tag="WIX18_000270"
     CDS             complement(2071..2790)
                     /locus_tag="WIX18_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEZ5237432.1"
                     /translation="MATLSNKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLE
                     KVYDAIVEAGHPEPFAIRFDLMSAEEKEFNQFAATIAEATQGKLDGIVHCAGYFYALS
                     PLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGF
                     GASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEAKSERKSYGDVL
                     PAFVWWASTESKGRSGEIVYL"
     gene            complement(2874..4187)
                     /locus_tag="WIX18_000271"
     CDS             complement(2874..4187)
                     /locus_tag="WIX18_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEZ5237433.1"
                     /translation="MMNTPHPRPKIAVIGAGWAGLSAAVTLARHADVTLFEAGRQAGG
                     RARTLAGNTDGFGFLDNGQHILLGAYRGVLRLMKTIGSDPRAAFLRVPLHWHMHGGLQ
                     FRALPLPAPLHILGGVLLARRAPTAFKAKLLADMSDLQKSARLGQPDTTVAQWLKQRN
                     VPRAAVMQFWQPLVWGALNTPLETASLRVLCNVLSDGVLTKKSGSDYLLPKQDLGAIV
                     AEPALADLQRLGADIRLETRVCRLNTLPDGKVLVNGEAFDAAVPATAPYHAAALLPEG
                     TPEHVQTAYQNLRYHAITTVYLRYAEPVRLPAPLTGLADGTVQWLLCRGRLGLPENEV
                     SAVISVSDRVGAFTNRAWADKVHADLKRILPHLGEPEAVRVITEKRATTAADAPPPDL
                     SWLHRHRIFPAGDYLHPDYPATLEAAVQSGFAAAETCLQSLSDAV"
     gene            complement(4266..5138)
                     /gene="hpnD"
                     /locus_tag="WIX18_000272"
     CDS             complement(4266..5138)
                     /gene="hpnD"
                     /locus_tag="WIX18_000272"
                     /EC_number="2.5.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="presqualene diphosphate synthase HpnD"
                     /protein_id="HEZ5237434.1"
                     /translation="MKGLDYCRQKAEESRSSFLSGFRFLTQKKRDAVTVLYAFCRELD
                     DVVDECSNPDVAQATLNWWRGDLDKVFGGEMPEHPVNQALQQVKETFKLPKYELEALI
                     DGMQMDLAQARYGSFEELKLYCHRVAGVVGCLIARILGFSDGKTLEYADKMGLALQLT
                     NIIRDVGEDARNGRIYLPMEEMQRFDVPASVILQCRPTENFTELMAFQIKRARETYRE
                     AVSLLPDADKKAQKVGLVMAAVYYALLNEIDRDGAQNVLKYKIALPSPRKKRIALKTW
                     LFGFKPRPGTPERA"
     gene            5309..7171
                     /gene="hscA"
                     /locus_tag="WIX18_000273"
     CDS             5309..7171
                     /gene="hscA"
                     /locus_tag="WIX18_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HEZ5237435.1"
                     /translation="MALLQISEPGMSAAPHRHRLAAGIDLGTTNSLVATVRSGSAACL
                     PDTDGCVTLPSVVRYLENGGIEVGKTALSAQKSDPLNTVSSAKRLIGRTLADLHQNTH
                     YLPYRFGDNQRVIELHTRQGVKTPVEVSAEILKTLKSRAEETLGGDLVGVVITVPAYF
                     DDAQRQATKDAARLAGLNVLRLLNEPTAAAIAYGLDNASEGTFVVYDLGGGTFDVSVL
                     QLTKGLFEVKATGGNSALGGDDFDHRLFCYLLEQNGLSQLNEQDSQLLLSLVRAAKEQ
                     LTTQTEARIQATLSDGMAIDTSISRAEFHNLTQHLVMKTLEPVKQALKDAGVGKNEVK
                     GVIMVGGSTRMLHVQQAVATFFGQTPLNNLNPDEVVALGAAIQANVLAGNKADGEWLL
                     LDVTPLSLGLETYGGLAEKIIPRNSTIPTARAQDFTTFKDGQTAMTIHVVQGERELVA
                     DCRSLAKFTLRGIPPMAAGAARIRVTFQIDADGLLSVSAQEQSTGVHAQIEVKPSYGL
                     DDGAITRMLKDSMDNAAEDMAARARAEAVVEAEGLTDAVNAALELDSDLLDAEELQQI
                     RQGIADLQGRLKDGKAEDIRAAAAKLGSITDNFAAKRMNRNIQRALTGQSVDNI"
     gene            7248..7904
                     /locus_tag="WIX18_000274"
     CDS             7248..7904
                     /locus_tag="WIX18_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEZ5237436.1"
                     /translation="MEKSGIVYLMKTVIKGVYKIGISEVSNFEGRMRHLENNGYANVA
                     GLERILAVKTDNYKEKENLLHEIFSKSRIGDTELFAVDENLVKRLFLSLRGEIVFPKN
                     ETAESEFEKSVHERRQEGNAESGRKQLLDLVRRGHREYPYALPRLLAGAASYKPKKSK
                     IRLFKEAYFRKNGRRLTDEIADGIHIYTCFSRADLEKAYSEYLELFKSESDAESRKPR
                     "
     gene            7940..8701
                     /locus_tag="WIX18_000275"
     CDS             7940..8701
                     /locus_tag="WIX18_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2314 domain-containing protein"
                     /protein_id="HEZ5237437.1"
                     /translation="MMGDSVIYYVEQADKPVNRAGERARKTFEYFWRELFWERRRIIP
                     ALDFAMVKAPFFQDGEDGEICEHMWIDDIYFDGLYIYGVLNNEPGELTNVEQGESVCV
                     PVDDISDWMFVCNGIPYGGFTIQAMRGQMTEEERTEHDAAWGIDFGDPGQVLLVYEEK
                     EHPENLEEHPMCRNCIDDFRQQLSQNPDFLHEQDEDGYTPLHHEAIAGNALMVQAMLE
                     YGANPASKTSEGYTALDFARLAGWQNVADLLEPRH"
     gene            8756..9097
                     /gene="fdx"
                     /locus_tag="WIX18_000276"
     CDS             8756..9097
                     /gene="fdx"
                     /locus_tag="WIX18_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009425374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HEZ5237438.1"
                     /translation="MPKITVLPHTTLCPEGAVIEDAPEGKTVLDVLLDHDIEVDHACE
                     KSCACTTCHVIIRKGFDSLEEPTELEEDLLDQAWGLEADSRLSCQAVVAGEDLIVEIP
                     KYTINHAREEH"
     gene            complement(9384..9971)
                     /locus_tag="WIX18_000277"
     CDS             complement(9384..9971)
                     /locus_tag="WIX18_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEZ5237439.1"
                     /translation="MNNMFAAKLSKLVYTASDHPDSLSEMEEFDRLILLIRKLYQILD
                     GQHILSRVTVCLHYRSRRGLIALDKAAAGCDAAMLRAQRWRIYTQIAERLAGSGGGFT
                     VTAESVSAACPELEGRYLELVRRTATSFGFVQVQEYPAGGQEETQAVPDAASDHSVRK
                     PIKINIEAKVERYPAYRPTAALKVTRRRFFRLQNR"
     gene            10184..10381
                     /gene="iscX"
                     /locus_tag="WIX18_000278"
     CDS             10184..10381
                     /gene="iscX"
                     /locus_tag="WIX18_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HEZ5237440.1"
                     /translation="MKWTDTRRIAEELYDLHGETIDPRTVRFTQLRDLIMALPEFDDD
                     PARCGERILEAVQQAWIDEAE"
     gene            complement(10449..10850)
                     /locus_tag="WIX18_000279"
     CDS             complement(10449..10850)
                     /locus_tag="WIX18_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEZ5237441.1"
                     /translation="MKDKHDSSAMRLDKWLWAARFFKTRSLAQKHIELGRVQVNGSKV
                     KNSKTIDIGDIIDLTLNSLPYKIKVKGLNHQRRPASEARLLYEEDAKTAALREERKQL
                     DQFSRITSAYPDGRPTKRDRRQLDRLKKGDW"
     gene            11061..12020
                     /locus_tag="WIX18_000280"
     CDS             11061..12020
                     /locus_tag="WIX18_000280"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HEZ5237442.1"
                     /translation="MKPVFLDFEQPIAELTNKIDELRFVQDESAVDISDEIHRLQKKS
                     NDLTKSIFSKLTPAQVSQVSRHPQRPYTLDYIDALFTDFEELHGDRHFADDHAIVGGL
                     ARFNGQSVMVVGHQKGRDTKEKIRRNFGMPRPEGYRKALRLMKTAEKFGLPVMTFIDT
                     PGAYPGIGAEERGQSEAIGKNLYELTRLHVPVLCTVIGEGGSGGALAVAVGDYVNMLQ
                     YSTYSVISPEGCASILWKTAEKAADAAQALGITADRLQKLDLVDTVIKEPLGGAHRDF
                     GQTMKNVKAVLEKQLHEAQSIPLADLLSRRFDRIMAYGKFSEQ"
     gene            12088..13398
                     /gene="tilS"
                     /locus_tag="WIX18_000281"
     CDS             12088..13398
                     /gene="tilS"
                     /locus_tag="WIX18_000281"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEZ5237443.1"
                     /translation="MLTLDAFEQCLKDCFPQGLNGKKTAVALSGGLDSVVLLHLLVRA
                     GKKGGFIPDALHIHHGLSPRADDWADFCQNYCDMLGVGLETVKVCVEKNGLGIEAAAR
                     QKRYAAFAEKGFDVLALAHHRDDQIETFMLAVARGGGLRALAAMPTVRPFGEKGIIWR
                     PLLPFSRQDIWDYAQKHGLPNIEDESNSDTAYLRNRFRHRILPELSAQIPHFGRHVLN
                     NVRALQEDLALLDEIIGQDCRWVCEEGSFDTVRWQAFSPRRKTHILRYFLKENGIPMP
                     NQNALADIARVLTEAKTGRWNLQGFELHHYAGRLFVFRLEKTDKLRFLKDRQISGNLR
                     EILTGQGFVLKRHPFGLPEHLLEQDGILRTVAVSDTLAVGGIHKDVKKILQGKRVLPV
                     LRPIWPLVADSGNRPLALANCCADFQYSVSDGILPVHPDFPILF"
     gene            13472..14257
                     /locus_tag="WIX18_000282"
     CDS             13472..14257
                     /locus_tag="WIX18_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEZ5237444.1"
                     /translation="MKHISSTNNEHIRHLHRLLSQGKFRRQYAQTVLEGVHLLQVFLQ
                     SGRKPVGVYIPEGKMPSEEVRRLRAVVPEGKVFSVSDGILKKISSLTCADDVLALIDI
                     PDAGALPAGGDCVVLDGVQDPGNVGTVLRSAAAAGVGTVVLGRGCADAWSPKVLRAGM
                     GAHFLSGIYPQADLEIWLARYKGRVFATALREEKQAVLYGEDLCGPTAWVFGNEGAGV
                     GKAVLDRADKCVRIPMHDATESLNVAMAATICLFEQMRQRSAY"
     gene            14267..14464
                     /locus_tag="WIX18_000283"
     CDS             14267..14464
                     /locus_tag="WIX18_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237445.1"
                     /translation="MPSEKIYYGVLIFLCIASMLLSPFFYAGALKPKKAALRKDGQWK
                     LILLSNTVAAAVLAWVWWKWF"
     gene            14726..15079
                     /locus_tag="WIX18_000284"
     CDS             14726..15079
                     /locus_tag="WIX18_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237446.1"
                     /translation="MKNCEFFYDPTRAIYDSGADYLTREKHRLVVIANSAWGLLLNLS
                     CYYDEVLEKRKIPFGKQEIDDDMDKVSALKRKFKDISEIKVGDGWEYPFNYEQGMKEL
                     DEVLLKYIPFFEEER"
     gene            15091..15396
                     /locus_tag="WIX18_000285"
     CDS             15091..15396
                     /locus_tag="WIX18_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237447.1"
                     /translation="MRVSKIIGSMLLVTAVQTVFSANVYACRHNGKTSYSQTPGKHCT
                     NAGLGRDRVYSSVRPAVKDRAEDAGVGDYSDTVRDEHVQNPKGNAQKDGSDAGIRPH"
     gene            15458..16834
                     /gene="mpl"
                     /locus_tag="WIX18_000286"
     CDS             15458..16834
                     /gene="mpl"
                     /locus_tag="WIX18_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HEZ5237448.1"
                     /translation="MKHIHIIGIGGTFMGGIAAIAKEAGFEVSGCDAKMYPPMSTQLE
                     ALGIGVHEGFDAAQLEEFKADVYVIGNVAKRGMDVVEAILNRGLPYISGPQWLAENVL
                     HHHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFLIGGVPENFSVSARLPQTPRQDPN
                     SQSPFFVIEADEYDTAFFDKRSKFVHYRPRTVVLNNLEFDHADIFADLGAIQTQFHHL
                     VRTVPSEGLIICNGQQQSLQDTLDKGCWTPVEKFGTEHGWQAGEANADGSFDVLLDGK
                     TAGRVKWDLMGRHNRMNALAVIAAARHVGVGIQTACEALGAFKNVKRRMEIKGTANGI
                     TVYDDFAHHPTAIETTIEGLRQRVGNARILAVLEPRSNTMKLGTMKSALPVSLKEADQ
                     VFCYAGGVDWNVAEALAPLGGRLHVGKDFDAFVAEIVKNAEAGDHILVMSNGGFGGIH
                     GKLLDALR"
     gene            17041..18093
                     /gene="bioB"
                     /locus_tag="WIX18_000287"
     CDS             17041..18093
                     /gene="bioB"
                     /locus_tag="WIX18_000287"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HEZ5237449.1"
                     /translation="MTVSPVALRRKTECKPHPTARYWKKCDVEALFGLPFLDLIYQAA
                     EIHRQNFNPREIQLSTLLSIKTGGCPEDCAYCPQSAHHNTNLGKEQMMDVDEIVEKAK
                     IAKSRGASRFCMGAAWRGPKPKDVETVSAIIKAVKGLGMETCGTFGMLEEGMAEDLKE
                     AGLDYYNHNLDTDPDRYNDIIHTRQHEDRMDTLGKVRNAGLKVCCGGIVGMNETRAER
                     AGLIASLANLDPQPESVPINRLVKVEGTPLADAEDLDWTEFVRTIAVARITMPQSYVR
                     LSAGRSNMPEAMQAMCFMAGANSIFYGDKLLTTGNPDEDGDRILMEKLNLYPLQFEPE
                     GEVAEVEKASGIKVDY"
     gene            complement(18171..18806)
                     /locus_tag="WIX18_000288"
     CDS             complement(18171..18806)
                     /locus_tag="WIX18_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HEZ5237450.1"
                     /translation="MNIKYSGIENRFETAILKKNGVRYGFVSFAPNLAAVKLNDYAKV
                     RKLITKTKQKADIVIVMFHGGAEGKQAEHLPFDTEIFYGENRGNVVEFARLAVDSGAD
                     VVFGQGPHVTRAVELYRDRFISYSGGNFATYGAINTSGISGIAPIFKIITDKQGRFVS
                     GNIIPITQVGDKIPKIDPEKTVIGRIIYLNRSDFPKGNGLDVSPDGSITRR"
     gene            19129..19389
                     /locus_tag="WIX18_000289"
     CDS             19129..19389
                     /locus_tag="WIX18_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HEZ5237451.1"
                     /translation="MTKAVRRKNVQTPKICYAFRTPSAYGQYLADAGFDYLSFANNHS
                     NDFGAQGITATAAGGSSFTYSIALKPLPITRPKLRKIPPSPR"
     gene            complement(19452..21311)
                     /gene="ilvD"
                     /locus_tag="WIX18_000290"
     CDS             complement(19452..21311)
                     /gene="ilvD"
                     /locus_tag="WIX18_000290"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEZ5237452.1"
                     /translation="MPEYRSKTSTHGRNMAGARALWRATGVMETDFGKPIIAVANSFT
                     QFVPGHVHLHNMGQLVAREIEKAGAIAKEFNTIAIDDGIAMGHSGMLYSLPSRDLIAD
                     SIEYMVNAHCADALVCISNCDKITPGMLIAAMRLNIPTIFVSGGPMEAGKVIGVANIQ
                     PERRLDLIDAMIESADDNVSNRQVEEVEQNACPTCGSCSGMFTANSMNCLTEALGLSL
                     PGNGSYLATHAGRKELFLEAGRMIVEITKRYYEQNDETVLPRSIATKKAFENAMTMDI
                     AMGGSTNTILHLLAVANEAGVDFKMADIDRLSRVVPCICKTAPNNHDYYMEDVHRAGG
                     IFAILKELDKAGKLHTDVHTIHAPTLKDAIEKWDVTNPENTRAIERFKAAPGGVRTTQ
                     AFSQNRMWKTLDLDREKGCIRDVAHAYSQDGGLAVLFGNIAERGCVVKTAGVDESILK
                     FTGRARVFESQEAAVEGILGNQIVAGDIVIIRYEGPKGGPGMQEMLYPTSYLKSKGLG
                     KACALLTDGRFSGGTSGLSIGHASPEAAEGGAIGLVHEGDTVEIDIPNRSIHLVISDE
                     ELAARRAEMEARGSKAWKPENRDRYVSAALRAYGAMATSADKGAVRDVAQIER"
     gene            complement(21484..23253)
                     /gene="cysI"
                     /locus_tag="WIX18_000291"
     CDS             complement(21484..23253)
                     /gene="cysI"
                     /locus_tag="WIX18_000291"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     hemoprotein subunit"
                     /protein_id="HEZ5237453.1"
                     /translation="MTVQTKTKGLAWQEKPLSDNERLKTESNFLRGTILDDLKDPLTG
                     GFKGDNFQLIRFHGMYEQDDRDIRAERAEAKLEPLKFMLLRCRLPGGIIKPSQWIELD
                     KFARENSHYRSIRLTNRQTFQFHGVPKAKLQTMHRLLHKLGLDSIATAADMNRNVLCT
                     SNPIESELHRQAYEYAKKISEHLLPRTRGYLDVWVDGKKVQSSDDFLQEDEPILGKTY
                     LPRKFKTAVVIPPLNDVDCYGNDLDFVAISDGGGQLAGFNVLAGGGLSMEHGNTKTYP
                     NISLELGFVPPEHALKAAEAVVTTQRDFGNRSDRKNARTRYTIQNMGLDNFRAEVERR
                     MGMPFEPIRPFKFTGRGDRIGWVKGIDGNWHLTLFIESGRLVDEGGKQLLTGVLEIAK
                     IHKGDFRITANQNLIVANVAEADKAKIEELARTYGLIRNDVSKLRENAMSCVSFPTCP
                     LAMAEAERVLPDFIDELDKIMAKHGTSDDYIVTRITGCPNGCGRAMLAEIGLVGKAVE
                     RYNLHIGGDREGVRIPRLYKENITLPEILAELDDLIGKWAAERNIGEGFGDFAIRTGI
                     VKPVLNAPVDFWDASKAVAIARA"
     gene            complement(23280..25094)
                     /locus_tag="WIX18_000292"
     CDS             complement(23280..25094)
                     /locus_tag="WIX18_000292"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     flavoprotein subunit"
                     /protein_id="HEZ5237454.1"
                     /translation="MSEHDMQNTNPPLPPLPPEITQLLSGLDAAQWAWLSGYAWAKAG
                     NGASAGLPALQTALPTAEPFSVTVLSASQTGNAKSVADKAADSLEAAGIQVSRAELKD
                     YKAKNIAGERRLLLVTSTQGEGEPPEEAVVLHKLLNGKKAPKLDKLQFAVLGLGDSSY
                     PNFCRAGKDFDKRFEELGAKRLLERVDADLDFTASANAWTDNIAALLKEEAAKNRATP
                     APQATPPADLQTASEGRYCKAAPFPAALLANQKITARQSDKDVRHIEIDLSGSDLHYL
                     PGDALGVWFDNDPALVREILDLLGIDQATEIQAGGKTLPVASALLSHFELTQNTPAFV
                     KGYASFADDDELDRIAADNAVLQGFVQSTPIADVLHRFPAKLTAEQFAGLLRPLAPRL
                     YSISSSQAEVGDEVHLTVGAVRFEHEGRARAGGASGFLADRLEEDGTVRVFVERNDGF
                     RLPEDSRKPIVMIGSGTGVAPFRAFVQQRAAENAEGKNWLIFGNPHFAADFLYQTEWQ
                     QFAKDGFLHRYDFAWSRDQEEKIYVQDKIREQAEGLWQWLQEGAHIYVCGDAAKMAKD
                     VEAALLDVIIGAGHLDEEGAEEYLDMLREEKRYQRDVY"
     gene            complement(25091..26377)
                     /locus_tag="WIX18_000293"
     CDS             complement(25091..26377)
                     /locus_tag="WIX18_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit 1"
                     /protein_id="HEZ5237455.1"
                     /translation="MTAQHQTPLRFITAGSVDDGKSTLIGRLLYDSKALLSDQIKTLE
                     SGKSNGLKETIDFSILTDGLEAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRN
                     MVTGASTASAAVVLVDASQLDFGAQPLQLLPQTKRHSAILRQLNCPHIVVAVNKMDLL
                     DYSEDKFNAIVEAYRRLAEQLGLKDVHFVPVSALLGDNIVYPGGNMPWYKGEPLLSIL
                     ENLPGADETGRSAADFYFPVQLVVRQDADKADDFRGYQGRIERGSVAVGQTVRIEPNG
                     LTAEVSEIITPKGEVAQAFAGEAATLRLDRDIDVSRGDLFVDKNSPLAPQKHLEATLC
                     WFDERPLNTARKYLLKHGTQTVPAKVGEIESVLDVRTLEQEAGAESLKMNDIAKVRIN
                     LQKPVTATPYAENTAAGSFILIDEATYGTVAAGMIL"
     gene            complement(26416..27339)
                     /gene="cysD"
                     /locus_tag="WIX18_000294"
     CDS             complement(26416..27339)
                     /gene="cysD"
                     /locus_tag="WIX18_000294"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HEZ5237456.1"
                     /translation="MTKTEPNNAQLDWLESESIHIIREVAAECENPALLFSGGKDSVV
                     LLALACKAFRLGSRPVKLPFPLVHIDTGHNYPEVIAFRDAQAAKLNARLIVGRVEDSI
                     AKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEKARAKERIFSFRDEF
                     GQWNPKAQRPELWSLYNTRLHKGENMRVFPISNWTELDIWQYIARENLELPPIYYSHR
                     REVVRRRGLLVPVTPLTPKMPSETSEILDVRFRTVGDISCTCPVESTASTPTEIIRET
                     AVADISERSATRLDDQASEAAMEKRKKEGYF"
     gene            complement(27377..28117)
                     /locus_tag="WIX18_000295"
     CDS             complement(27377..28117)
                     /locus_tag="WIX18_000295"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenylyl-sulfate reductase"
                     /protein_id="HEZ5237457.1"
                     /translation="METTLLKPALWQIPHIGSGSETALAEKTETLKQRLHRIAGSHRD
                     ARFASSLAAEDMVITDLIAGENLNIGIFTLDTGLLHAETLNLLDRIERVYPHMQIKRF
                     QPIREDALHYVESKGRFAFYDSVEARRECCRIRKIEPLNRAIAGADAWLTGQRREQSA
                     TRTELPFAEYDAGRGIGKYNPIFDWSEHDVWAYILANNVPYNDLYRQGFPSIGCDPCT
                     RPVKAGEDIRAGRWWWEGRNSKECGLHK"
     gene            complement(28128..29579)
                     /gene="cobA"
                     /locus_tag="WIX18_000296"
     CDS             complement(28128..29579)
                     /gene="cobA"
                     /locus_tag="WIX18_000296"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HEZ5237458.1"
                     /translation="MNYFPIFANLAGRPVLVVGGGAVAARKISLLLKAGAEVRVAAKH
                     LNAELSALAAENKILWLAEEFRAEHIRTVFLIIAASSDQALNRRVFHLAESCQKPVNV
                     VDDRDHCSFIFPSVIDRNPVQIAVSSSGSAPVLARLLRERLEALLPPSLGDMAEISGR
                     WRDAVKDKLKSVTERRRFWEKQFNGRFAALVKNRQNTLAERELAGQLEQSRQNDQGGS
                     VSLVGAGPGDAGLLTLKGLQEIQQADVVLYDALVSDGILSLVRRDAERIFVGKRARGD
                     RTPQEDTNALMVRLAREGRRVVRLKGGDPFVFGRGGEELETLARHQIPFSVVPGITAA
                     VGATAYAGIPLTHRDYAQSAVFVTGHRKADAPDIEWQTLARSRQTLVIYMGALKAALI
                     AERLQQHGRSPDTPAAVISQGTLPAQKTATGTLANLAELAETAPNPALIVIGEVVGLH
                     EKLAWFGENGEGENRVGQAYPALGGLNAGQRAA"
BASE COUNT         6379 a         7841 c         8584 g         6948 t
ORIGIN      
        1 cgccttgtcc tgatttttgt taatccacta taccatacaa ccacgccgga attaagttta
       61 aatttgaata aaaggttcgg gttctgcaaa atacagaacc cgaaccttgt tcggatattg
      121 aaaccggccg cccgattttg ggcggtgcgg cttgcaagta tcaagattcg catatgccgt
      181 ctgaagctcg gagaggttca gacggcatat gcttatttgg gctgctcttc gacgaatctc
      241 ggacctttca agatgccgtt gtgagaatag ggcgacagca ggttgtatgc ggcggttttg
      301 gaaacctgat aaccgcggtc ggtcaggctg ttggcaatct gattgaccac tgcgctgacc
      361 aaagccccca acaggccgct gttgctgttg ttgctgcctt cgcggatgct ggccgaaccc
      421 gaccacaact cttttccgtt gcgggaatcg accagccgtg ctttggcgga tacggtcgtc
      481 acgctgtcta aaatttgata tgaagtgccg tattcggtaa ccgtaatgta caaaaccgca
      541 tcattgccga aaatctgatg cagtttttcc ggccggacgg cgtgaatatc ggcggcattg
      601 gtcaagccgt tttgtttgaa ggtttcctcc acgactgcgg cggggaagac gtaatagccg
      661 gcttcggaaa gcggcgcggc ggtcgaagcc agtacacccc atgttccgtt gacatcgggc
      721 gattcgttca gcggcggaac caccaaaatt gaagccggtt tgctttcctt gaatgacgtg
      781 tagtcgaaat cgggcgcttt ttgaacttgg caggcagaca gcgccaacac ggcggcaagc
      841 cctaaaatca aaggtttcat cgcttgcctc ctttaccggt tttcatcagg aagtccataa
      901 atacgcccga ttcgggaaac agccttttct cttcttcaaa ctggcggaac gcgccctctt
      961 tgtctcccga acgggaaagc agcagtccca gatgggcgtg cgcacccggg gcggcattca
     1021 tttttttgtt gccggcttcc acaaagtatt tttccatctt ttcggtctgc ttgcccaacg
     1081 aagtgtcgtc gtttttcaaa ccttcataga cggtatcggg atagccgccg taataataca
     1141 gggatttttg cccgttgccg ccgcaggcgg tcagagccaa gaccgccgca cacagcgaca
     1201 aacggctcaa ggttttcgga ttcatcattt ctccttaacg gttgggttgc catgcgccgt
     1261 tgtcaacagc ctgaaccagg ctgttgacgg cttcgcggat tgccaagtct aaaactttgc
     1321 cgttcaaagt cgcatcgtag ccggaagtgc cgccgaaacc gatgatttca cggttggaaa
     1381 gtgcgtattc gcccgcgccc tgtgcggaat agacgatttc ggaagtattg acgttgacga
     1441 tattcagagc cacttttgca taggcgattt gcgatttgcc gcgacccaaa atgccgaaga
     1501 gctgatgatc gccgacatct ctgcgtccga attcggttac atcgccggta acgacataat
     1561 ctgcgccttt caggttatgc gctttgccgg aaatgccgga ttcctgtttt aatgcgttca
     1621 aattggtgcg gttcagtacg ttgaagcggt tggtctgttg caggtgcgtt accagaatgg
     1681 tttttgcctg gctgcccaaa cggtcttccc cgtcggagaa aatgcctttt tggaagctgg
     1741 agcggttgtc gaatgttccg acggaaatcg gggtacgaac accgtgatat tgcgtattgt
     1801 aggaggcgac tttctctacc tcgagactgc gtgaggattc ggtcgcacag ccggtcagtg
     1861 aaacggcagc ggcggcaagg acaacggcgg tggaaacggt tttcataaaa tttaccctaa
     1921 ggtcaagtta aggaaataac gggttatcat tattgtcctt atgtaaattt aagtcaaggt
     1981 gtttgtctgt gcgggacgga tgcgcgcgga aggtacggat atttttcaaa cggaatcgcg
     2041 gcgcgggcgg gatgcctgcc ttttccggat ttagaggtaa acgatttcgc cgcttcgccc
     2101 tttgctttcg gtacttgccc accagacaaa tgcgggcagc acgtccccgt agcttttgcg
     2161 ttcgcttttg gcttcgcccg gatgggattt gatgcgttgc ggggaattga tgggtccggg
     2221 gacgaggacg ttggcgcgca ggttgccgaa gcgttcccat tcgtcggcgg cgactttgca
     2281 caggtagttc aacgcggctt tggacgcgcc gaagccgccc cagtaggctt tgggtgtttc
     2341 gccgtggctt tcgccgacga agatgacgga cgcgtcgggc gactgcttca gcagcgggaa
     2401 cagggcgcgg gtcagcccca taggtgcgac ggtgttgatg cggtattggt tgacccattc
     2461 ggcgacggtt tggaaatcca gcggcgagag ggcgtaaaaa tagccggcgc agtggacgat
     2521 gccgtccagt ttgccttgcg tggcttcggc aatggtggcg gcgaactgat tgaattcttt
     2581 ttcttccgca ctcatcaggt cgaaacggat ggcgaagggt tcggggtgtc cggcttcgac
     2641 aatcgcgtca tagacttttt ccagtttttt ctgatggcgt gccaccaaaa tcacggttgc
     2701 gcctgccgcc gcataggctt tggcgacctg ttcgcccaga ccttgcgatg cgccggtaac
     2761 taagatggtt ttgttggaca gtgtcgccat actttttcct ttttggtggt cggtcggggg
     2821 tattttagcg ttttgccgca ccttgtaaag cgtcccgata ccagccggcg ttttcagacg
     2881 gcatcgctca ggctttgcag gcaggtttcc gccgccgcga aacctgattg tacggcggct
     2941 tcgagcgtgg cggggtagtc tgggtggagg tagtcgccgg cggggaagat gcggtgccgg
     3001 tgcagccacg acaaatccgg cggcggggca tcggctgcgg ttgtggcgcg tttttcggtg
     3061 atgacgcgca cggcttcggg ttcgcccaaa tgcggaagga tgcgtttgag gtcggcgtga
     3121 actttgtccg cccacgctcg gtttgtaaac gcgccgacgc ggtcggaaac gctgatgacg
     3181 gcggacactt cgttttcagg cagtccgagc ctgccccggc aaagcagcca ttgcaccgtg
     3241 ccgtcggcaa ggccggtcag cggggcgggc aggcggacgg gttcggcgta gcgcagatag
     3301 acggtggtga tggcgtggta gcgaaggttt tgatatgccg tctgaacgtg ttcgggcgtg
     3361 ccttcgggca ggagcgcggc ggcgtggtag ggcgcggtgg cggggacggc ggcatcgaaa
     3421 gcttcgccgt tgacgagcac tttcccgtcc gggagggtgt tcagacggca tacgcgcgtt
     3481 tcgaggcgga tgtccgcgcc gagccgttga agatccgcca aggcgggttc ggcgacgatt
     3541 gcgcccaaat cctgtttggg taggagatag tcgctgccgg attttttcgt cagcacgccg
     3601 tcggacaaaa cgttgcacaa cacgcgcagg cttgcggttt ccaaaggcgt gttgagcgcg
     3661 ccccaaacca agggctgcca aaactgcatc acggcggcac gcggcacgtt ccgctgtttc
     3721 agccattgcg ccactgtcgt gtcgggctgt ccgaggcgtg cggacttctg caaatcggac
     3781 atatcggcaa gcagtttggc tttgaatgca gtcggtgcac gccgggcaag cagcacgccg
     3841 cccaaaatat gcagcggcgc gggcaggggg agggcgcgga actgcaaacc gccgtgcata
     3901 tgccagtgca gcggtacgcg caaaaaggcg gcacggggat ccgaaccgat ggttttcatc
     3961 aggcgcaaca cgccccggta tgcgccgagc aaaatgtgct gcccgttgtc caaaaaaccg
     4021 aaaccgtcgg tatttccggc cagtgtgcgc gccctgccgc ccgcctgccg gccggcttca
     4081 aacagggtaa cgtcggcgtg ccgcgccaag gtgacggcgg cggacagtcc tgcccagcct
     4141 gcgccgatga cggcgatttt cgggcgcgga tgcggcgtgt tcatcattta ttcctccaat
     4201 ggttgaaacc ccgtttttcg gggcggcggg ggttgggttt tcctgaaggg cgggcggtat
     4261 gcgccttatg cccgttccgg cgtgccgggg cgcggtttga atccgaataa ccaggttttc
     4321 agggcaatgc gttttttgcg cggcgaaggg agggcgattt tgtatttgag gacgttttgc
     4381 gcgccgtccc ggtcgatttc gtttaaaagc gcgtaataaa ccgccgccat aaccagtccg
     4441 actttttggg cttttttatc ggcatcaggc agcagcgata cggcttcacg gtaggtttca
     4501 cgcgcacgct ttatttggaa tgccatcaat tcggtgaaat tttctgtcgg ccggcactgc
     4561 aaaatcacac ttgcggggac atcaaaccgc tgcatttcct ccatcggcag gtaaatccgc
     4621 ccattacggg cgtcttcgcc gacatcgcgg atgatgttgg tcagttgcag cgcaagcccc
     4681 attttgtcgg cgtattccag cgttttgccg tctgaaaacc ccaaaatccg cgcaatcagg
     4741 cagccgacca cgcccgcgac gcggtggcaa tacagtttca attcttcaaa actgccgtaa
     4801 cgcgcctgag ccaaatccat ctgcatcccg tcgattaagg cttccagttc atatttcggc
     4861 agcttgaagg tttccttaac ctgctgcaag gcctgattga cggggtgttc cggcatctcg
     4921 ccaccgaaca ccttgtccaa atcgccgcgc caccagttca atgttgcctg tgcaacatcg
     4981 gggttggaac attcgtcaac cacatcgtcc aattcgcggc aaaaagcata taaaaccgtt
     5041 accgcatccc gttttttctg agtcaggaaa cggaagcccg ataaaaaact ggagcggctt
     5101 tcttctgctt tttgacggca atagtcgagt cctttcacga tttatattcc taatgatggg
     5161 cgagaaagac ggattttatc ggcatttggc ggtagagggc aatttcggcg gcacggccca
     5221 atccttagcg gtttgctcaa ctatcggcgc aaattctgtt aaaatgccga cttccttcct
     5281 ttacacaccg caccgacagg cagaatttat ggctcttttg cagatttcag aaccgggtat
     5341 gtccgccgcc ccgcaccgac accgtttggc ggcaggcatc gatttgggta cgaccaacag
     5401 cttggttgcc accgtccgca gcggcagtgc agcctgcctg cccgataccg acgggtgcgt
     5461 taccctgcct tccgtcgtcc gttatttgga aaacggcggc attgaagtcg gcaaaaccgc
     5521 cctgtccgcg caaaaatccg acccgctgaa caccgtcagc tctgccaaac gccttatcgg
     5581 acggacgctt gccgatctgc atcaaaatac gcattacctg ccttaccgtt tcggcgacaa
     5641 tcaacgcgtt atcgaactgc atacgcggca gggggtgaaa acgcctgtcg aagtgtcggc
     5701 ggaaatcctc aaaaccctta aatcgcgcgc cgaagaaacc ttgggcggcg atttggtcgg
     5761 cgtggtgatt accgtccctg cctatttcga tgatgcccaa cgccaagcca ccaaagatgc
     5821 cgcgcgtctg gcgggtttga acgtattgcg cctgctcaac gaacccaccg ctgccgcaat
     5881 cgcctacggg ctggacaacg cctcggaagg cacgtttgtc gtgtacgact tagggggcgg
     5941 cacattcgac gtatccgtat tgcaactgac caaaggactg tttgaagtca aagccaccgg
     6001 aggcaacagc gcgttgggcg gcgacgattt cgaccatcgt ttgttctgct atctgctcga
     6061 acaaaacgga ctctcccaac tcaacgaaca agacagccaa ctcctgctct cgctcgtccg
     6121 cgccgccaaa gaacaattaa ccacgcaaac cgaagcgcgc attcaggcga cgctttcaga
     6181 cggcatggca atcgacacaa gcatcagtcg cgccgagttc cacaacctga cgcagcattt
     6241 ggtgatgaaa acgctcgagc cggtcaaaca ggcgttgaaa gatgccggtg tcggtaaaaa
     6301 cgaagtcaaa ggcgtaatta tggtcggcgg ttcgacccgt atgctgcacg tccagcaggc
     6361 agtcgccacc tttttcgggc aaaccccgct gaacaacctc aaccccgacg aagtcgtcgc
     6421 gctcggcgca gccatacagg cgaacgtcct cgcaggcaac aaagccgacg gcgaatggct
     6481 gctgctggac gttacgccct tgtcgctcgg tttggaaacc tatggcggct tggcggaaaa
     6541 aatcatcccg cgcaattcca ccatccccac cgcgcgcgcg caggacttta ccaccttcaa
     6601 agacggtcag accgcgatga cgatacacgt cgtacaaggc gaacgcgaac tggttgccga
     6661 ctgccgcagc cttgccaaat tcaccctgcg cggcattccg ccgatggcgg cgggtgcggc
     6721 gcgtatccgc gtaaccttcc aaatcgatgc ggacgggctg ctgtccgttt ccgcccaaga
     6781 acaaagtacc ggcgtacacg cgcaaatcga agtcaaacct tcctacggtt tggatgacgg
     6841 cgcgattacc cgaatgctta aagacagtat ggacaacgcc gccgaagata tggcggcacg
     6901 cgcccgcgcc gaagccgtgg tcgaagccga aggcctgacc gatgccgtca acgccgccct
     6961 cgagttggac agcgatttgc tggatgccga agaattgcaa cagattcggc aaggtatcgc
     7021 cgatttgcaa ggccgtctga aagacggaaa agccgaagac atccgcgccg ccgccgccaa
     7081 actcggcagc atcaccgaca atttcgccgc caaacgcatg aaccgcaaca tccaacgtgc
     7141 gctgacaggc cagagtgtcg ataatatttg atacttaaac ggtttcagac ggcatagaga
     7201 taacctgatg ccgtctgaag gctcgaaaac acttgaaaaa catcgatatg gaaaagtcag
     7261 gcattgtcta tctgatgaaa accgtcatca agggcgtata taaaatcggc atttcggagg
     7321 taagcaattt tgaaggcaga atgcgccatt tggaaaacaa cggctatgcg aacgttgccg
     7381 gattggagcg catcctcgcc gtcaaaaccg acaattacaa agaaaaagaa aacctgctcc
     7441 atgaaatttt cagcaaaagc aggataggcg ataccgaatt gttcgccgtg gacgaaaacc
     7501 ttgtaaaacg tttgttttta tcgcttcgcg gcgaaatcgt gttcccgaaa aacgaaacgg
     7561 cggaatcgga atttgaaaaa agcgtccacg aacgcaggca ggaagggaat gccgaatccg
     7621 gccgcaaaca actgcttgat ttggtacggc gcggacaccg ggaataccct tacgcgctgc
     7681 cccggctttt ggcgggcgcg gcatcctaca agccgaaaaa atcgaaaatc cgccttttta
     7741 aagaagcata tttccgcaaa aacggcagga ggctgacgga cgaaattgca gacggcatcc
     7801 atatttacac ctgtttttcg cgggcggatt tggaaaaagc ctattccgaa tatttggaac
     7861 ttttcaaatc cgaatcggat gccgaaagca gaaaaccacg gtaaggtgca aacagatacc
     7921 gtacacgttg aggagcagta tgatgggcga ttccgtcatt tattatgtag aacaggcaga
     7981 caaaccggta aaccgtgccg gcgaacgcgc ccgtaaaaca ttcgaatatt tttggcgcga
     8041 gcttttttgg gaacgccgcc gcatcattcc cgccttagat tttgccatgg tcaaagcccc
     8101 ttttttccaa gacggcgaag acggcgaaat ttgcgaacat atgtggatcg acgatattta
     8161 ttttgacggt ctttacattt atggcgtgct gaacaatgaa cccggcgaac tgaccaatgt
     8221 cgaacaaggc gaaagcgttt gcgttccggt tgacgacatc agcgactgga tgttcgtgtg
     8281 caacggcatt ccctacggcg gctttaccat acaggcaatg cgtggacaga tgacggaaga
     8341 ggagcgtacc gaacacgatg ccgcatgggg aatcgatttc ggcgatcccg ggcaggtatt
     8401 gctggtgtat gaagaaaaag aacatcccga aaatctggaa gagcatccga tgtgccggaa
     8461 ctgtattgac gattttcggc aacagttgtc ccaaaatccg gattttctgc atgagcagga
     8521 cgaagacggc tatacgccgc ttcatcatga agccatcgca ggaaatgcac ttatggttca
     8581 agccatgctt gaatacggcg caaatcctgc ctcaaagaca tcggaaggct ataccgccct
     8641 cgattttgcc cgcctggcgg gctggcaaaa tgttgccgac ctgctcgaac cgcgacatta
     8701 ggcggacagt tttccgaaaa cgaacacaaa cactttttac agaaagacaa taaaaatgcc
     8761 caaaatcacc gtacttccac acacgacatt atgccccgaa ggcgcggtta tcgaagacgc
     8821 gcccgaaggc aaaaccgtcc ttgacgtgct gctcgaccat gatatcgaag tcgatcacgc
     8881 ctgcgaaaaa tcctgcgcct gcacaacctg ccacgtgatt atccgcaaag gtttcgacag
     8941 cctggaagag ccgaccgaat tggaagaaga cctgctcgat caggcttggg gtttggaagc
     9001 cgattcgcgc ctgagttgtc aggcggttgt cgccggcgag gatttgattg tggaaatccc
     9061 caaatacacc atcaaccacg cgcgagaaga acactgaaaa caggccgcct gaagccggca
     9121 cgcttcagac ggcattgttg cgcggataag gcgcaatcgc ccgaaaacag gcgttcgtac
     9181 aggcggaact ttcgattcta tagtgaatta acaaaaatca ggacaaggcg gcgagccgca
     9241 gacagtacca atagtacggc aaggcgaggc aacgctgtac cggtttaaat ttaattcact
     9301 atatattgat ttttatcggt tttctgacgg aacggattgg tgcggcatcc gaggcggatt
     9361 actcgggcgc gatgcacggg tatttatcgg ttttgcagcc ggaaaaaccg ccggcgggtt
     9421 actttcaggg cggcggtcgg gcggtatgcc ggatagcgtt ccactttcgc ttctatattg
     9481 attttgattg gttttctgac ggaatgatcc gatgcggcat ccgggacggc ttgtgtttct
     9541 tcctgcccgc ctgccggata ttcctgtact tgcacgaaac cgaaagaggt ggcggtgcgg
     9601 cggacaagct cgagatagcg tccttcaagc tccggacagg cggcggacac gctttctgcc
     9661 gtaaccgtga agccgccgcc cgacccggca aggcgttccg caatctgcgt gtagatgcgc
     9721 caacgttggg cgcgcaacat tgccgcatcg caaccggcag ccgctttatc caaggcaatc
     9781 agaccgcgcc tgctccggta gtgaaggcaa accgttactc tggagaggat atgttgcccg
     9841 tccaatattt gatacagttt gcgtatcagc agaatcaggc ggtcaaactc ctccatctcc
     9901 gacagggaat caggatggtc ggaagcggta taaaccagtt tggacaattt tgcggcaaac
     9961 atattgttca tcaatcttcc ttgtcggttg aaaccccgct cttcggggcg gtagaatcag
    10021 atttgtttgg gagggacaac tcctcccaga tcaggacgac acataggctg gtgcttgatg
    10081 tgttgtccgg cgagttgaaa cattcagcca tcctcaaggt gcggcagttt tgccgaaaca
    10141 tattctacac ggcttcaatg ccggacgata aaaggaaatt catatgaaat ggaccgacac
    10201 ccggcgtatc gccgaagaac tctatgacct gcacggcgaa accatcgatc ccagaaccgt
    10261 gcgctttacc caactgcgcg acctgattat ggcattgccc gaatttgacg acgaccccgc
    10321 ccgttgcggc gaacgcatcc tcgaagccgt gcagcaggca tggatagacg aggcggaata
    10381 agtttcggga atgccgtctg aaatgcggcg gtacgcggtt cgtgcttctg tttgcagcgg
    10441 gaatggtttt accagtctcc ttttttcagc ctgtccagtt ggcggcggtc gcgcttggtc
    10501 ggtctgccgt cgggataggc ggaagtgatg cggctgaatt ggtcgagctg tttgcgctct
    10561 tccctcaatg ctgccgtttt tgcgtcttct tcatacagaa gccgcgcctc ggatgccggg
    10621 cggcgttggt ggttcaaacc tttaaccttg attttatagg gaagggaatt gagcgtcagg
    10681 tcgataatat cgccgatgtc tatggtttta ctgtttttga ccttcgagcc gtttacttga
    10741 accctaccca gttcgatgtg cttttgcgca agggaacggg tcttgaaaaa acgtgccgcc
    10801 caaagccatt tgtccagccg catggcggaa gaatcgtgct tgtctttcat acgattttgt
    10861 ttgaaataat tgaatttgtt tcgagtttag cataagatac gccgcctata actagtatat
    10921 atgcactaat ccactgtttt ccatgctgtc cgaacacaaa aagagggtgt ggaaaagccg
    10981 ttttggacaa taaattaact gcggaatatg cacaaatagc gtatgatagc ggcagaatct
    11041 gttgatgaga gcttcattct atgaaacctg tttttttgga ttttgaacaa cccatagccg
    11101 aactgaccaa caaaatcgat gagctgcgtt tcgtccaaga cgagtctgcc gtcgatattt
    11161 cggacgaaat acaccgtttg cagaaaaaaa gcaacgacct gaccaaatcg attttcagca
    11221 aacttacgcc cgcccaggtt tcacaggttt cccggcatcc gcagcgtccc tatactttgg
    11281 attacattga tgcgctgttt actgattttg aagagctgca cggcgaccgc cattttgccg
    11341 acgatcatgc gattgtcggc ggattggcgc gtttcaacgg acaaagcgtg atggtcgtcg
    11401 ggcatcagaa agggcgcgac accaaagaaa aaatccgccg caacttcggt atgccgcgcc
    11461 ccgagggcta ccgcaaagcc ctgcgcctga tgaaaacggc tgagaaattc ggcttgcccg
    11521 tcatgacctt tatcgatacg ccgggcgcgt atcccggcat cggcgcggaa gaacgcgggc
    11581 agtcggaagc catcggcaaa aacctgtacg aactgacgcg cctgcacgtc cccgttttgt
    11641 gtaccgtcat cggcgaaggg ggctcgggcg gtgcgttggc ggtcgccgta ggcgattacg
    11701 tcaatatgct gcaatactcg acctattctg ttatctcccc cgaaggctgc gcttcgattt
    11761 tgtggaaaac cgccgaaaag gcggcggatg cggctcaggc tttgggcatt actgctgacc
    11821 gcctgcaaaa gctggacttg gtcgataccg tcatcaaaga accattgggc ggcgcgcatc
    11881 gggatttcgg gcaaaccatg aaaaacgtaa aagccgtttt ggaaaaacaa ctgcacgaag
    11941 cgcaaagcat cccgcttgcc gatttgcttt cgcgccgttt cgaccgcatt atggcttacg
    12001 gcaaattttc ggaacaataa ttcaggtaga acaagcagca agcagtttgt ctgaaactgc
    12061 ttgctttttc tttatcggga cggaaccgtg ctgactttag atgcgtttga gcaatgcttg
    12121 aaggattgtt ttcctcaagg tctgaatgga aaaaaaacag cagtggcatt aagcggcggc
    12181 ttggattccg tcgttttgct gcatctgctt gtccgcgccg gaaaaaaggg cggttttatt
    12241 ccggatgcat tgcatatcca tcacggcttg agtccccgtg ccgacgattg ggcagatttc
    12301 tgccaaaact attgcgatat gctcggggtg gggctggaaa cggttaaggt ctgcgtggaa
    12361 aaaaacggtt tgggcatcga ggcggcggcg cggcaaaagc gttatgccgc gtttgccgaa
    12421 aaaggctttg acgttttggc gttggcgcac cacagggacg atcaaatcga aacctttatg
    12481 ctggcagtcg ctcgcggcgg cggtttgcgc gctttggcgg ctatgcccac cgtccgccct
    12541 tttggggaaa aaggcatcat ctggcggcct ttgctgcctt tttcgcgcca agacatatgg
    12601 gattatgccc aaaaacacgg tttgccgaat atcgaggacg aaagcaatag cgatacggct
    12661 tatttgcgaa accgcttccg gcaccgtatt ttgcccgaac tttcggcgca gattccccat
    12721 ttcgggcggc atgtactgaa caatgtccgc gctttgcagg aagatttggc tttgttggac
    12781 gaaatcatcg gtcaggactg ccgttgggtc tgtgaggaag gcagtttcga tacggtgcgt
    12841 tggcaggcgt tttccccacg ccggaaaacc catattttgc ggtatttttt gaaggaaaac
    12901 ggcatcccca tgccgaatca gaatgccctt gccgacattg cccgggtttt gacggaggca
    12961 aaaaccggac gttggaactt gcaaggcttt gaattgcatc attatgcagg caggctgttt
    13021 gtgttccgac tggaaaaaac ggataaactg cggtttttga aagacaggca gataagcgga
    13081 aatttaaggg aaatattgac ggggcaggga tttgttttaa aacgtcatcc gtttgggctt
    13141 cctgagcatc ttttggagca ggacggaatt ttgaggacgg tagcggtatc ggatacgttg
    13201 gctgtcggcg gcatccataa ggatgtgaaa aaaatccttc aggggaaacg ggttttgcct
    13261 gtcctgcgcc caatttggcc gcttgttgcc gacagcggaa accgtccatt ggcgttggca
    13321 aactgttgtg cggatttcca atactcggtt tcagacggca ttttgcccgt ccatcctgac
    13381 tttcccattt tattttgata atatcgcaaa cagatttcgg cggcgttcag acgggtattg
    13441 tccggttgca tatttctaaa aggcttgtga agtgaaacac atcagttcga ccaataatga
    13501 acacatccgg cacctgcacc gcctgttgtc gcaaggaaag ttcagacggc aatacgccca
    13561 aaccgttttg gagggcgtgc acctgcttca ggttttcctg caatccggca gaaaaccggt
    13621 cggggtatat attcccgagg gcaaaatgcc gtctgaagaa gtccgcaggc tgagggcggt
    13681 tgtgccggaa ggcaaggttt tttccgtttc agacggcata ttgaaaaaaa tcagcagctt
    13741 gacttgtgcg gatgatgtgc ttgcgctgat tgatattccg gatgcgggtg ctttgcctgc
    13801 cggcggcgac tgtgtggttt tggacggcgt gcaagatccg ggcaatgtcg gcaccgtctt
    13861 acggagtgcg gcggcggcag gggtaggtac ggtcgttttg ggcaggggtt gcgcggacgc
    13921 gtggtcgccc aaggtattgc gcgcggggat gggcgcgcat ttcttgtcgg gcatttatcc
    13981 gcaggcggat ttggaaatat ggttggcgcg ctataaaggc cgtgtgtttg ccaccgcctt
    14041 gcgcgaggaa aagcaggcgg ttttgtacgg cgaagatttg tgcggaccga cagcctgggt
    14101 gtttggcaac gaaggcgcgg gggtcggtaa agcggttttg gacagggcgg acaagtgtgt
    14161 caggattccg atgcacgatg caaccgagtc tttaaatgtc gcgatggcgg cgacaatctg
    14221 cctgtttgaa cagatgcggc agcggtcggc gtattgagga aaagaaatgc cgtctgaaaa
    14281 aatctattac ggcgtattga ttttcttatg tatcgcttct atgctgctgt cgccgttttt
    14341 ttatgcgggt gctttgaagc ccaagaaggc ggcattgcgg aaggacgggc agtggaaact
    14401 catcttattg tccaataccg tggcggcggc ggttttggct tgggtgtggt ggaaatggtt
    14461 ttgacagata ttgctcaaaa tcgtgctaat ggaatccgaa caaataaaga atttggtaaa
    14521 aaatttgtta aatcaacgaa ttaaagtttt gtggaaaaca aaacagctct aagcaaatag
    14581 ggcgtttgtc ggtaaatacg gaagagttgc ggcattatcg ggcatcttta acaagtagtg
    14641 ccgtcttggc aggcaatcgg tttttatggg cagcttgcaa aatcgcggat ataaaattgc
    14701 gaatcggtta aagtgtgggg acgctatgaa aaattgcgaa tttttttatg acccgacaag
    14761 ggcaatctat gatagcggtg cagattactt aactagggaa aaacatagat tagtcgtaat
    14821 tgcaaatagt gcttgggggc tattacttaa tttatcttgt tattatgacg aggttttgga
    14881 aaagcggaaa ataccgttcg gcaaacagga aattgatgac gatatggaca aagtgtccgc
    14941 ccttaagcgg aagtttaaag atatttctga aatcaaagta ggggatggtt gggaataccc
    15001 gttcaattat gagcagggaa tgaaagaatt agatgaagtg ctattgaaat acattccctt
    15061 ttttgaagaa gaacgataaa ggaggttgat atgcgcgtat ctaaaataat tggaagtatg
    15121 ttgcttgtta cagcggttca gaccgtattt tcggcaaatg tttacgcgtg ccgccataat
    15181 ggtaaaacca gttacagcca aactccggga aaacattgta ccaacgcggg tttggggcgg
    15241 gaccgggtgt acagttcggt tagaccggca gtaaaagaca gggcggaaga cgcaggggtc
    15301 ggcgattatt cggacacggt gagggacgaa cacgtccaaa atccgaaagg gaatgcacag
    15361 aaagacggtt cggatgccgg catcaggccg cattgattga aaccgaatca gccatgacgg
    15421 cgttgaataa tagaatttga acgattaggg aactctgatg aaacacatcc acattatcgg
    15481 tatcggcggc acgtttatgg gcgggattgc cgccattgcc aaagaagccg ggtttgaagt
    15541 cagcggttgc gacgcgaaga tgtatccgcc gatgagcacc cagctcgaag ccttgggtat
    15601 aggcgtacac gaaggcttcg acgcggcgca gttggaggaa tttaaagccg acgtttacgt
    15661 catcggcaat gtcgccaagc gcgggatgga tgtggttgag gcgattttga accgcgggct
    15721 gccttatatt tccggtccgc aatggctggc tgaaaacgtg ctgcaccatc attgggtact
    15781 cggtgtggcg gggacgcacg gcaaaacgac caccgcgtcc atgctcgcat gggttttgga
    15841 atatgccgga ctcgcgccgg gcttccttat cggcggcgta ccggaaaact ttagcgtttc
    15901 cgcccgcctg ccgcaaacgc cgcgtcaaga cccgaacagc caatctccgt ttttcgttat
    15961 cgaagccgac gaatacgaca ccgccttttt cgacaaacgc tccaaattcg tacattaccg
    16021 cccgcgtacc gtcgtgttga acaatctgga attcgaccac gccgacatct ttgccgactt
    16081 gggcgcgata cagacccagt tccaccacct cgtgcgcacc gtgccgtctg aaggcttaat
    16141 catctgtaac ggacagcagc aaagcttgca ggatacttta gacaaaggct gctggacgcc
    16201 ggtggagaaa ttcggcacgg aacacggctg gcaggccggc gaagccaatg ccgacggctc
    16261 gttcgacgtg ttactagacg gcaaaacggc cggacgcgtc aaatgggatt tgatgggcag
    16321 gcacaaccgc atgaatgcgc tcgccgtcat tgccgccgcg cgtcatgtcg gtgtcggcat
    16381 tcagacggcc tgcgaagcct tgggcgcgtt taaaaacgtc aaacgccgca tggaaatcaa
    16441 aggcacggca aacggcatca ccgtttacga cgacttcgcc caccacccga ccgccatcga
    16501 aaccaccata gaaggtctgc gtcagcgcgt cggaaacgcc cgcatcctcg ccgtcctcga
    16561 gccgcgctcc aacaccatga aactcggcac gatgaagtcc gccctgcctg taagcctcaa
    16621 agaagccgac caagtgttct gctacgccgg tggcgtggac tggaacgtcg ccgaagccct
    16681 cgcgcctttg ggcggcaggc tgcacgtcgg caaagacttc gatgccttcg ttgccgaaat
    16741 cgtgaaaaac gccgaagcag gcgaccatat tttggtgatg agcaacggcg gttttggcgg
    16801 aatacacgga aagctgctgg acgctttgag atagcccggg cgatgccgtc tgaaagccct
    16861 tcagacggca tcgtccggct gcgcggcaca aaggcggaaa aaccgtttgc cccgtatttt
    16921 caaacgcgtt acacttgccg ccgctgtttt cagccatttg attacccgca accgccgtca
    16981 ttgcgccggc ggtttgcctg tcagcgtcat tgcgccgctg taaatacgaa agaacacatt
    17041 atgaccgtat cccccgtcgc cttgcgccgt aagaccgagt gcaagcctca tcccaccgcg
    17101 cgctattgga aaaaatgcga tgtcgaagcc ctgttcggac ttcccttcct cgacctcatt
    17161 taccaagccg ccgaaatcca ccgccaaaat ttcaacccgc gcgaaatcca gctttccacg
    17221 ctgttgtcca tcaaaaccgg cggttgtccc gaagactgcg cctattgtcc gcaatcggcg
    17281 caccacaata ccaatctggg caaagagcag atgatggatg tggatgaaat cgtcgaaaaa
    17341 gccaaaatcg ccaaatcgcg cggcgcaagc cggttttgta tgggcgcggc gtggcgcggc
    17401 cctaaaccca aagacgtgga gacggtttcc gcaatcatca aagccgtcaa gggcttgggt
    17461 atggaaacct gcggcacgtt cggtatgctc gaagaaggta tggcggaaga cttgaaagag
    17521 gcgggcttgg attattacaa ccacaacctc gacaccgacc ccgaccgcta caacgacatc
    17581 atccacaccc gccaacacga agaccgaatg gacaccttgg gcaaagtccg caacgccggt
    17641 ttgaaagtct gctgcggcgg catcgtcggg atgaacgaaa cccgcgccga acgtgccggg
    17701 ctgattgcca gtctcgccaa tctcgacccg cagcccgaaa gcgtgccgat taaccggttg
    17761 gtcaaagtgg aaggcacgcc gcttgccgat gccgaagatt tggactggac ggaatttgtc
    17821 cgcaccatcg ccgtggcgcg gattacgatg ccgcaaagtt atgtccggct gtcggcaggg
    17881 cgcagcaata tgcctgaagc aatgcaggcg atgtgcttta tggcgggcgc gaactcgatt
    17941 ttttacggcg acaagctgct gaccacgggc aatcctgatg aggacggcga cagaatcctg
    18001 atggaaaagc tcaacctgta tcccttgcag tttgaaccgg aaggcgaggt cgccgaagtg
    18061 gaaaaagcct ctgggattaa agtggattat tgacgattga aaaatgccgt ctgaaacccg
    18121 gaaaaaggct ttcagacggc atttgtccgg acggcatttc caatatcttt ttaccggcgc
    18181 gtgatgctgc cgtcgggcga gacatccagt ccgttcccct tggggaaatc gctgcggttc
    18241 agataaataa tccgcccgat aacggttttc tcggggtcga ttttggggat tttatcgccg
    18301 acttgagtga tggggataat gttaccggaa acgaaccgcc cctgtttgtc ggtgataatt
    18361 ttgaaaatcg gcgcgatgcc gctgatgccg gaggtgttga ttgcgccgta ggtggcaaag
    18421 ttgccgccgc tgtaggagat gaagcggtcg cggtaaagtt cgacggcgcg agtaacgtgc
    18481 ggcccctgcc cgaatacgac atccgcgccg gaatcgacgg caagccgtgc aaactcgacg
    18541 acgttgcccc tgttttcccc atagaagatt tcggtatcga acggcaggtg ttccgcctgt
    18601 ttcccttccg cgccgccgtg gaacattaca atgacgatgt cggctttctg tttggttttg
    18661 gtaatcagtt ttctaacttt ggcataatcg ttcagtttga cggcggcaag gttgggggcg
    18721 aaggagacga agccgtatct tacgccgttt ttcttcagga tggcggtttc aaacctgttt
    18781 tcgatgcccg aatatttgat gttcaattcg tcaaggttcg ccctttatgc cgtttccgca
    18841 ccgcaaaccg ccggggtcaa gccctcggcg catcctgccg gaacggaatc cccgtgctgc
    18901 cgattgacgg ttcaaacccc gcgcccgttt caaataccgg cgatgtggac ggacaggatg
    18961 cgcctgacga aaagacagcc gataccgttt ccattatcgg cgtgggcgac attatgctcg
    19021 gcagcaatta tccggtcgat tacctgcccg ataccaatat tctgaaaaac gtcgaatctg
    19081 ccttgcaaga cgcggacatt accgtcggca acctcgaagg cacgctgttt gacgaaggcg
    19141 gtacgccgaa aaaatgtgca aacccccaaa atatgctatg cattccgaac gccctccgca
    19201 tacgggcaat accttgccga cgcgggattc gactacctca gcttcgccaa caaccacagc
    19261 aacgacttcg gcgcgcaagg catcacggca acggcggcgg gcggcagctc ttttacatac
    19321 tcaatcgcgc taaagccgct gccgataacg aggccaaaat tgcggaaaat accgccatcg
    19381 cccagataaa tttgtccatc atcagacctt tactgttcag acgagacagc atttgccgca
    19441 cgttttgggg cttatctttc gatttgcgct acgtcgcgca ccgcgccttt gtcggcggaa
    19501 gtcgccatcg cgccgtaagc ccttaatgcg gcggagacgt agcggtcgcg gttttccggt
    19561 ttccacgctt tgctgccgcg tgcttccatt tcggcacggc gcgcggcaag ctcttcatcg
    19621 gaaatgacaa ggtggatgct gcggttgggg atgtcgattt cgacggtatc gccttcgtgt
    19681 accaaaccga tcgcgccacc ttccgccgct tcgggcgagg cgtgtccgat ggacaaacct
    19741 gatgtgccgc cggagaagcg tccgtcggtt aagagagcgc aggctttgcc gaggccttta
    19801 gatttcaggt aggaagtcgg atacagcatt tcctgcatgc ccgggccgcc tttcgggcct
    19861 tcgtagcgga tgatgacgat gtcgccggcg acgatttggt tgcccaaaat gccttcgaca
    19921 gcggcttcct ggctttcaaa cacgcgcgcg cggccggtga atttgaggat gctctcgtcc
    19981 acgcctgcgg tttttaccac gcagccgcgt tcggcgatgt tgccgaacaa gaccgccaaa
    20041 ccgccgtctt gcgagtaggc gtgtgccacg tcgcggatac agcctttttc gcggtcgagg
    20101 tcgagtgttt tccacatacg gttttgcgag aacgcttggg tggtgcgtac gccgccgggc
    20161 gcggctttga agcgttcgat ggcgcgggtg ttttcagggt tggttacgtc ccatttttca
    20221 atcgcgtctt tcagcgtcgg tgcgtggata gtgtgcacgt cggtgtgcag cttgcccgct
    20281 ttgtccaatt ctttcaggat ggcgaagatg ccgccggctc ggtgcacgtc ttccatatag
    20341 tagtcgtggt tgttgggtgc ggttttgcag atgcagggca caacgcggct taagcggtcg
    20401 atgtctgcca ttttgaaatc cacgcccgct tcgttggcaa cggcgagtaa atgcaaaata
    20461 gtgttggtgc tgccgcccat cgcaatatcc atcgtcatag cgttttcaaa cgcttttttg
    20521 gtggcaatgc tgcgcggtaa cacggtttca tcgttttgct cgtaatagcg tttggtgatt
    20581 tcgacaatca tacggccggc ttcgaggaac aattctttgc ggccggcgtg ggtcgccaaa
    20641 tacgaaccgt tgccgggtag ggacagaccg agtgcttcgg tcaggcagtt catcgagttt
    20701 gccgtaaaca tacccgaaca cgagccgcag gtcgggcagg cgttttgttc gacttcttca
    20761 acttgccggt tgctgacatt gtcgtccgcc gattcaatca tcgcgtcaat caagtccaaa
    20821 cggcgttcgg gctggatgtt tgccacgccg ataactttac ctgcttccat cggaccgccg
    20881 gaaacgaaga tggtcgggat gttcaggcgc atcgcggcaa tcagcatgcc cggggtgatt
    20941 ttgtcgcagt tggaaatgca caccagcgcg tcggcgcagt gggcattgac catatattcg
    21001 atggagtcgg caatcaaatc gcggctgggc agggagtaca gcatgccgct gtgtcccata
    21061 gcgatgccgt cgtcgatggc gatggtgttg aattctttgg cgatggcgcc ggctttttcg
    21121 atttcgcggg caaccagctg gcccatattg tgcaggtgga catggccggg cacgaattgg
    21181 gtgaaggagt tggcaacggc gatgatgggc ttgccgaagt cggtttccat cacgccggtg
    21241 gcgcgccaca atgcacgtgc gcccgccata ttgcggccgt gggtggaggt tttggagcgg
    21301 tattctggca tagtgtgttt ccttgtgcct ataccgtctg aaagacaggg ctgtttcaga
    21361 cggtatcggg tacggttttt tagagtggga aaagagggta ttttatacca agtatcggaa
    21421 ttttgcggga ttgaaacggc gtgcggcaaa aaagaaaatc cccgcaggaa tgcggggacg
    21481 ggttcaggcg cgggcaatcg cgacggcttt ggatgcgtcc caaaaatcaa cgggtgcatt
    21541 taatacgggt ttgacgatgc ccgtccgtat ggcgaaatcg ccgaaacctt cgccgatatt
    21601 gcgttctgcc gcccatttgc cgatcaggtc gtccaattcg gcaaggattt cgggcagggt
    21661 gatgttttct ttataaaggc gggggatgcg tacgccttca cggtcgccgc cgatatggag
    21721 gttgtagcgt tcgacggctt tgccgaccag cccgatttcc gccaacattg cccgtccgca
    21781 gccgttgggg cagccggtaa tgcgggtaac gatgtagtcg tccgacgtgc cgtgtttcgc
    21841 cataatctta tccagctcgt cgatgaagtc cggcagcacg cgttcggctt ccgccattgc
    21901 cagcgggcag gtcgggaagg aaacgcacga catcgcattt tcgcgcagtt tgctgacatc
    21961 gttgcggatt aatccgtatg ttcgggcaag ttcttcgatt tttgctttgt ctgcttcggc
    22021 gacatttgcc acgatgaggt tttggttggc ggtaatgcgg aaatcgcctt tgtggatttt
    22081 ggcgatttcc aacacgccgg tcagaagctg tttcccgcct tcgtcaacca aacggccgct
    22141 ttcgatgaaa agggtcaaat gccagttgcc gtctatgcct tttacccagc cgatgcggtc
    22201 gccgcgcccg gtaaatttga acgggcgtat gggttcgaac ggcataccca tacggcgttc
    22261 gacttcggcg cggaagttgt ccaagcccat attttgaatg gtgtagcggg tgcgggcgtt
    22321 tttgcggtcg ctgcggttgc cgaagtcgcg ctgtgtggtt accaccgctt cggcggcctt
    22381 cagcgcgtgt tccggaggta cgaaacccag ttccagtgaa atgttcggat aggttttggt
    22441 gttgccgtgt tccattgaaa gcccgccgcc tgccaaaaca ttaaaaccgg caagctgtcc
    22501 gccgccgtct gaaatggcga caaaatccaa gtcgttgccg tagcagtcca catcatttaa
    22561 gggcgggatg acgactgcgg ttttgaattt gcgcggcaga taggttttgc ccaaaatcgg
    22621 ctcgtcttct tgaaggaagt cgtcggaact ttgaactttt ttgccgtcca cccacacatc
    22681 cagataaccg cgcgtgcgcg gcagcaggtg ttcggaaatc tttttcgcgt attcgtaagc
    22741 ctgccggtgc agttcggact cgatcgggtt ggacgtgcaa agcacgttgc ggttcatatc
    22801 cgccgccgtg gcgatggaat ccaaacccag tttgtgcaag aggcggtgca tcgtctgcaa
    22861 cttggctttc ggcacgccgt gaaattggaa ggtttgccgg ttggtcagcc ggatggagcg
    22921 gtaatgactg ttttcccggg caaatttgtc cagttctatc cattgggacg gtttgatgat
    22981 cccgcccggc agtcggcagc gcaaaagcat aaatttcaaa ggctcgagtt ttgcctcggc
    23041 gcgttcggcg cggatgtcgc ggtcgtcctg ctcatacata ccgtggaagc ggatgagttg
    23101 gaagttgtcg cctttgaagc cgcccgtgag cgggtctttc aaatcgtcca aaatcgtgcc
    23161 gcgtaaaaaa ttgctttcgg ttttcagacg ttcgttgtcg gatagcggtt tttcttgcca
    23221 cgccaaacct tttgtcttgg tctgtacggt cattttgtgt tcctcccgat tatatttaat
    23281 caataaacat cacgctgata gcgtttttct tcgcgcagca tatccaaata ttcttctgcg
    23341 ccctcttcgt ccaaatgtcc tgccccgata atcacatcca gcaaggcggc ttccacgtct
    23401 tttgccattt ttgccgcatc gccgcacaca tagatatgcg cgccttcctg cagccattgc
    23461 caaagtcctt ccgcctgttc gcggattttg tcctgcacat agattttttc ttcctgatcg
    23521 cgcgaccagg cgaaatcgta tctgtgcagg aagccgtctt tggcaaactg ctgccattcg
    23581 gtctgataga ggaagtcggc ggcaaaatgc ggattgccga aaatcagcca gtttttgcct
    23641 tccgcatttt ctgcggcacg ttgttggacg aaagcgcgga acggtgcgac gccggtgccc
    23701 gagccgatca tcacaatcgg cttgcggctg tcttcgggca gcctgaagcc gtcgttgcgt
    23761 tccacaaaca cgcgcaccgt gccgtcctct tccagccggt cggcaaggaa acccgatgcg
    23821 ccgcccgctc tggcgcgccc ttcgtgttca aaacgcaccg cgccgacggt caggtgcact
    23881 tcgtccccca cttccgcctg cgacgaggaa atcgaataca ggcgcggcgc aagcgggcgc
    23941 agcaggccgg cgaattgttc cgccgtcagt tttgcaggga agcggtgcag cacatcggca
    24001 atcggcgtgc tttgcacaaa gccttgcaaa acggcgttgt cggcagcaat acggtcgagt
    24061 tcgtcatcat cggcgaacga ggcatagcct ttgacaaagg cgggggtgtt ttgcgtgagt
    24121 tcaaaatggg ataacagtgc ggaggcaacc ggcagggttt ttccgcccgc ctgtatttcc
    24181 gttgcctgat cgatgccgag caggtctagg atttccctga ccagtgccgg atcgttgtca
    24241 aaccaaacgc cgagcgcgtc gcccgggagg tagtgcaaat ccgaaccgct caaatcgatt
    24301 tcgatgtggc gcacgtcttt atcggattgg cgggcggtga ttttctgatt ggccagcagg
    24361 gcggcgggaa agggggctgc cttgcagtac ctgccctccg atgccgtctg aaggtcggcg
    24421 gggggcgttg cctgcggcgc gggcgttgcc cggttttttg cggcttcttc ttttaagagt
    24481 gcggcgatat tgtctgtcca ggcgtttgcg gaggcggtaa agtccaaatc cgcatcaacg
    24541 cgttcgagca ggcgtttcgc ccccaattct tcaaaacgtt tgtcgaaatc tttgcccgcc
    24601 cggcagaaat tcggatagga actgtcgccc aaacccagta cggcaaattg gagtttgtcc
    24661 aatttcgggg cttttttgcc gttcagcagt ttgtgcagca cgacggcttc ttccggcggt
    24721 tcgccttcgc cttgggtgga cgtaaccagc agcaggcggc gttcgccggc gatgtttttc
    24781 gccttatagt ctttcagttc ggcgcgactg acttggatgc cggcggcttc caggctgtcc
    24841 gccgctttgt cggcaacgga tttcgcattg ccggtttgcg aggcggaaag gacggttacg
    24901 gaaaaaggtt ctgccgtcgg caatgccgtc tgaagcgcgg gcagtcctgc agatgccccg
    24961 tttcctgctt ttgcccaagc gtagccggac agccacgccc attgtgccgc gtccagcccc
    25021 gacaggagct gcgtgatttc gggcggcaga ggcggtaatg gcggatttgt gttctgcata
    25081 tcgtgttcac tcataaaatc atacctgccg caacagtgcc gtatgtcgct tcgtctatca
    25141 ggataaacga accggcggcg gtgttttccg cataaggcgt tgccgtaacg ggtttttgaa
    25201 ggttgatgcg gactttggcg atgtcgttca tcttcaagga ttccgcgccg gcctcttgtt
    25261 ccagcgtgcg gacatccaaa acgctttcaa tttccccgac ttttgccggc acggtttgcg
    25321 tgccgtgctt gagcaggtat ttgcgcgcgg tgttgagcgg acgttcgtca aaccagcaaa
    25381 gcgtggcttc cagatgtttt tgcggggcga gcggggaatt tttatcgaca aaaaggtcgc
    25441 cgcgcgaaac atcgatgtcg cggtccagcc ggagggttgc cgcctcgccg gcaaaagcct
    25501 gcgccacttc ccctttcggc gtgatgattt cggacacttc ggcggtcagc ccgttcggtt
    25561 cgatgcggac ggtttgcccg acggcgaccg aaccgcgttc gatgcgcccc tgatagcctc
    25621 ggaaatcatc ggccttgtcg gcatcttggc ggacgaccag ttggacgggg aaataaaaat
    25681 cggcagcgga acgaccggtt tcgtccgccc ccggcaggtt ttccaaaatg gacaataagg
    25741 gttcgccttt ataccaaggc atattgccgc cggggtaaac gatgttgtcg cccaagagtg
    25801 cggacaccgg tacgaaatgc acgtctttca aaccgagctg ttcggcaagt cggcggtatg
    25861 cctccacaat ggcgttgaat ttgtcttcgc tgtaatccag caggtccatt ttgttgaccg
    25921 ccaccacaat atgcgggcag ttgagttggc ggaggatggc ggaatggcgt ttggtctgcg
    25981 gcagaagctg caagggctgc gcgccgaaat ccagttggga tgcgtcaacc agtacgactg
    26041 ccgccgaagc ggtgcttgcg cccgtaacca tattgcgcgt gtattgttcg tgccccggcg
    26101 tgtcggcgat gatgaatttc cgtttcgccg tggaaaaata gcggtatgcc acatcgatcg
    26161 taatgccctg ttcgcgttcg gcttccagtc cgtcggtcag gatggagaag tctatggttt
    26221 ctttcaaacc gttgcttttg ccggattcca aggttttgat ttggtcggac agcagggctt
    26281 tgctgtcgta gagcagtcgt ccgattaggg tgcttttgcc gtcatcgacg ctgccggcgg
    26341 taatgaagcg gagcggggtt tggtgttgtg ccgtcatatt ttcttcctca tatctgctta
    26401 aagggttttt gaaatttaga aatagccttc ttttttgcgt ttttccattg ccgcctcgct
    26461 tgcctgatcg tccagccggg tcgcgctgcg ttcggaaatg tcggcaaccg ccgtttccct
    26521 gataatctcc gtcggcgtgg acgcggtgct ttctaccggg caggtgcagc tgatgtcgcc
    26581 gacggtgcgg aagcggacat caaggatttc ggaggtttca gacggcattt tcggcgtaag
    26641 cggcgtaacg gggaccagca gccccctgcg tctgaccact tcgcgcctgt ggctgtaata
    26701 aatcggcggc agttcgaggt tttcgcgggc gatgtattgc cagatgtcga gttccgtcca
    26761 gttggaaatc gggaagacgc gcatattttc gcctttgtgc agcctggtgt tgtacagcga
    26821 ccacagctcg gggcgttgcg ccttcggatt ccattgtccg aactcgtcgc ggaacgagaa
    26881 aatccgttct ttggcgcggg ctttttcttc gtcgcgccgc gcgccgccca tcagcgcgtc
    26941 aaagccgttt gcctcgatgg tttccaacag cgtaaccgcc tgcgccgcat tgcgcgaatc
    27001 ggtttctttg cgtaaaacta ctgtgccttt ggcgatggag tcttccacgc gccccactat
    27061 caggcgggca ttgagttttg ccgcctgcgc gtcgcggaag gcaatcactt cgggataatt
    27121 gtgtcccgtg tcgatatgca ccagcgggaa gggcagtttt accggcctgc tgcccagccg
    27181 gaaggctttg caggcgaggg cgagcaggac cacggaatct ttgccgccgg aaaagagcag
    27241 ggcggggttt tcgcattctg ccgccacttc gcggataatg tggatggatt cggattccaa
    27301 ccagtcgagt tgggcgttgt tcggttcggt tttcgtcata ccatattcct tatttcttct
    27361 gtctgatatt tatgaattat ttgtgcagcc cgcattcttt gctgtttctg ccttcccacc
    27421 accaccgccc tgcgcggatg tcttcgcccg ccttgacggg gcgggtgcag gggtcgcagc
    27481 ctatgctggg aaatccttgc cggtacaaat cgttgtaagg cacattgttg gcgaggatgt
    27541 atgcccacac gtcgtgttcc gaccagtcga aaatcgggtt gtatttgccg atgccccgtc
    27601 cggcatcgta ttcggcaaac ggcagttccg tgcgtgtggc ggattgttcg cggcgttgcc
    27661 cggtaagcca ggcgtccgcg cctgcaatgg cgcggttgag cggttcgatt tttcggatgc
    27721 ggcagcattc gcggcgcgct tcaacgctgt cgtaaaaggc aaacctgcct ttgctttcca
    27781 cataatgcag ggcatcttcc cgtatcggtt ggaaacgctt gatttgcata tgcggataaa
    27841 cacgttcaat cctatccaac aggtttaaag tttccgcgtg cagcagcccc gtatccaaag
    27901 taaaaatacc gatattgagg ttttctccgg cgataaggtc ggtaattacc atatcttccg
    27961 cagcaaggct gctggcaaac cgtgcatccc ggtggctgcc ggcaatccgg tgcaggcgtt
    28021 gtttgagggt ttccgttttt tccgcaaggg cggtttcgct gccggatccg atatgcggta
    28081 tctgccacag ggcgggtttg agcagtgtcg tttccatttt tcccgcctta tgccgcccgt
    28141 tgtccggcat tcagtccgcc caatgcggga tacgcctgcc cgacccggtt ttctccttcg
    28201 ccgttttcac cgaaccaggc gagtttttcg tgcagcccca ccacttcgcc tatgacaatc
    28261 aatgccggat tcggcgcggt ttcggcgagt tcggcaaggt tggcgagcgt gccggttgcg
    28321 gttttttgag ccggcaacgt gccttggctg atgacggctg ccggcgtgtc gggcgagcgt
    28381 ccgtgctgtt gcagccgttc ggcaatcagg gcggctttga gcgcacccat ataaatcacc
    28441 aaggtctggc ggctgcgggc gagggtctgc cattcgatgt cgggcgcatc cgccttgcgg
    28501 tggccggtta cgaaaaccgc actttgggca taatcgcggt gcgtgagcgg gatgccggca
    28561 taggcggtcg cgccgacggc ggcggtaatg ccggggacga ccgaaaacgg aatctgatgg
    28621 cgtgccaagg tttccaattc ttcgccgccg cgtccgaaca cgaaagggtc tccgcctttc
    28681 aaacgcacca cgcgcctgcc ttcgcgggcc agcctgacca taagcgcatt ggtgtcctct
    28741 tgcggggtgc ggtcgccccg ggcgcgcttg ccgacaaaaa tccgttccgc atcgcggcgg
    28801 acgagggaca gtatgccgtc tgaaaccagc gcgtcgtaaa gcaccacgtc tgcctgctgg
    28861 atttcctgta gccctttgag cgtcagcagc cccgcatcgc cgggacccgc gccgaccagc
    28921 gagacggagc cgccttgatc attttgacga ctttgttcca attggcctgc caattcccgt
    28981 tcggcaaggg tgttttgccg gtttttgacg agggcggcga aacgtccgtt aaactgcttt
    29041 tcccaaaagc ggcggcgttc ggtaacggat ttcagtttgt ccttgacggc atcgcgccac
    29101 cttcctgaaa tttccgccat atcgcccaaa gacggcggca gcagggcttc cagcctttca
    29161 cgcagcagtc gggcgaggac gggcgcgctg ccggagctgg aaacggcaat ctgaaccggg
    29221 ttgcggtcga taaccgacgg gaagatgaag ctgcaatggt cgcggtcgtc caccacgttg
    29281 accggctttt ggcagctttc ggcaagatgg aaaacgcgcc ggttgagggc ttggtcgctg
    29341 cttgccgcaa tgatgaggaa aactgtgcgg atgtgttcgg cacgaaattc ttcggcaagc
    29401 cacaggattt tgttttccgc cgccaacgcg gagagttcgg cattcaggtg ttttgcggca
    29461 accctgacct ctgcgcccgc cttcagcagc aggctgattt tgcgtgcggc gaccgcgccg
    29521 ccgcctacga ccaatacggg gcggccggcg aggttggcga aaatagggaa ataattcact
    29581 ggctgactcc tttgctgttt gcccgcacct tgtttccgat acggtgcgtc gcggcatttt
    29641 tgtcggaatg cgggtcattt tagacaaaag gattttcccg gttaaataat aaaaaggcat
    29701 ttgttagaag ctgaaagcta tatgagggcg gctgcggatg cggcggtttt cc
//
LOCUS       DAWITQ010000007        29484 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.007, whole genome shotgun sequence.
ACCESSION   DAWITQ010000007 DAWITQ010000000
VERSION     DAWITQ010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 29484)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29484)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29484
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.007"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            93..1175
                     /locus_tag="WIX18_000297"
     CDS             93..1175
                     /locus_tag="WIX18_000297"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009310927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEZ5237459.1"
                     /translation="MFLWLAHFSNWLTGLNIFQYTTFRAVMAALTALAFSLMFGPWTI
                     RRLTALKCGQAVRTDGPQTHLVKNGTPTMGGSLILTAITVSTLLWGNWANPYIWILLG
                     VLLATGALGFYDDWRKVVYKDPNGVSAKFKMVWQSSVAIIAGLALFYLAANSANNILI
                     VPFFKQIALPLGVAGFLVLSYLTIVGTSNAVNLTDGLDGLAAFPVVLVAAGLAIFAYV
                     SGHYQFSQYLQLPYVAGANEVVIFCTAMCGACLGFLWFNAYPAQVFMGDVGALALGAA
                     LGTVAVIVRQEFVLVIMGGLFVVEAVSVMLQVGWYKKTKKRIFLMAPIHHHYEQKGWK
                     ETQVVVRFWIITIVLVLIGLSTLKIR"
     gene            1290..1562
                     /locus_tag="WIX18_000298"
     CDS             1290..1562
                     /locus_tag="WIX18_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HEZ5237460.1"
                     /translation="MKQTVKWLAAALIALGLNQAVWADDVSDFRENLQAAAQGNAAAQ
                     YNLGAMYYKGRGVRQDLVLAQEWFGKACQNGDQDGCDIYQRLKAGY"
     gene            1652..2989
                     /locus_tag="WIX18_000299"
     CDS             1652..2989
                     /locus_tag="WIX18_000299"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HEZ5237461.1"
                     /translation="MTLENKKILVAGLGGTGISMIAYLRKNGAEVAAYDAELKPERVS
                     QIGKMFDGLVFYTGRLKDALDNGFDILALSPGISERQPDIEAFKQNGGRVLGDIELLA
                     DIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTPVLEAEWQREGKK
                     ADVWVLELSSFQLENTESLRPTAATVLNISEDHLDRYDDLLDYAHTKAKIFRGDGVQV
                     LNADDAFCRAMKRAGREVKWFSLEHEADFWLERETGRLKQGNEDLIATQDIPLQGLHN
                     ATNVMAAVALCEAVGLPREALLEHVKTFQGLPHRVEKIGEKNGVVFIDDSKGTNVGAT
                     AAAIAGLQNPLFVILGGMGKGQDFTPLRDALAGKAKGVFLIGVDAPQIRRDLDGCGLN
                     MTDCATLEEAVQTAYAQAEACDIVLLSPACASFDMFKGYAHRSEVFIEAFKAL"
     gene            3126..4439
                     /locus_tag="WIX18_000300"
     CDS             3126..4439
                     /locus_tag="WIX18_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004465726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsW"
                     /protein_id="HEZ5237462.1"
                     /translation="MTGGFLKISEVLVKVGDGVHTLLLDRQIVRDGRKFDAPLLWMVV
                     LMTAFSLLMIYSASVYLASKEGGDQFFYLTRQAGFVVAGLIASGFLWFLCRMRTWRRL
                     VPWIFALSGLLLVVVLIAGREINGATRWIPLGPLNFQPTELFKLAVILYLASLFTRRE
                     EVLRSMESLGWQSIWRGTANLIMSATNPQARRETLEMYGRFRAIILPIMLVAFGLVLI
                     MVQPDFGSFVVITVIAVGMLFLAGLPWKYFFVLVGSVLGGMVLMITAAPYRVQRVVAF
                     LDPWKDPQGAGYQLTHSLMAIGRGEWFGMGLGASLSKRGFLPEAHTDFIFAIIAEEFG
                     FFGMCVLIFCYGWLVVRAFSIGKQSRDLGLTFNAYIASGIGIWIGIQSFFNIGVNIGA
                     LPTKGLTLPLMSYGGSSVFFMLISMMLLLRIDYENRRKMRGYRVE"
     gene            4443..5510
                     /gene="murG"
                     /locus_tag="WIX18_000301"
     CDS             4443..5510
                     /gene="murG"
                     /locus_tag="WIX18_000301"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HEZ5237463.1"
                     /translation="MGGKTFMLMAGGTGGHIFPALAVADSLRARGHHVIWLGSKDSME
                     ERIVPQYGIRLETLAIKGVRGNGIKRKLMLPFTLYQTVREAQRIIRKHRVECVIGFGG
                     FVTFPGGLAAKLLGVPIVIHEQNAVAGLSNRHLSRWAKRVLYAFPKAFSHEGGLVGNP
                     VRADISNLPAPAERFQGRKGRLKILVVGGSLGADVLNKTVPQALALLPDNARPQMYHQ
                     SGRGKLGSLQADYDALGVKAECVEFITDMVSAYRDADLVICRAGALTIAELTAAGLGA
                     LLVPYPHAVDDHQTANARFMVQAEAGLLLPQTQLTAEKLAEILGSLNREKCLKWAENA
                     RTLALPHSADDVAEAAIACAA"
     gene            5665..7074
                     /locus_tag="WIX18_000302"
     CDS             5665..7074
                     /locus_tag="WIX18_000302"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEZ5237464.1"
                     /translation="MMKNRVTNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAAT
                     EHLGSLGIQVYPGHTAEHVNGADVVVTSTAVKKENPEVVAALEQQIPVIPRALMLAEL
                     MRFRDGIAIAGTHGKTTTTSLTASILGAAGLDPTFVIGGKLNAAGTNARLGKGEYIVA
                     EADESDASFLHLTPIMSVVTNIDEDHMDTYGHSVEKLHQAFIDFIHRMPFYGKAFLCI
                     DSEHVRAILPKVSKPYATYGLDDTADIYATDIENVGAQMKFTVHVQMKGHEQGSFEVV
                     LNMPGRHNVLNALAAIGVALEVGASVEAIQKGLLGFEGVGRRFQKYGDIKLPNGGTAL
                     LVDDYGHHPVEMAATLAAARGAYPEKRLVLAFQPHRYTRTRDLFEDFTKVLNTVDALV
                     LTEVYAAGEEPIAAADSRALARAIRVLGKLEPIYCENVADLPEMLLNVLQDGDIVLNM
                     GAGSINRVPAALLELSKQI"
     gene            7187..8101
                     /locus_tag="WIX18_000303"
     CDS             7187..8101
                     /locus_tag="WIX18_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEZ5237465.1"
                     /translation="MQNFGKVAVLMGGFSSEREISLDSGTAILNALKSKGIDAYAFDP
                     KETPLSELKAQGFQTAFNILHGTYGEDGAVQGALELLGIPYTGSGVAASAIGMDKYRC
                     KLIWQALGLPVPEFAVLHDDTDFDAVEEKLGLPMFVKPAAEGSSVGVVKVKGKGRLKS
                     VYEELKHLQGEIIAERFIGGGEYSCPVLNGKGLPGIHIIPATEFYDYEAKYNRDDTIY
                     QCPSEDLTEAEESLMRELAVRGAQAIGAEGCVRVDFLKDTDGKLYLLEINTLPGMTSH
                     SLVPKSAAVTGVGFADLCIEILKTAHVG"
     gene            8091..8819
                     /locus_tag="WIX18_000304"
     CDS             8091..8819
                     /locus_tag="WIX18_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HEZ5237466.1"
                     /translation="MWDNAEAMERLTRWLLVMMAMLLAASGLVWFYNSNHLPVKQVSL
                     KGNLVYSDKKALGSLAKEYIHGNILRTDINGAQEAYRRYPWIASVMVRRRFPDTVEVV
                     LTERKPVARWGDHALVDGEGNVFEARLDRPGMPVFRGAEGTSAEMLRRYDEFSTVLAK
                     QGLGIKEMTYTARSAWIVVLDNGITVRLGRENEMKRLRLFTEAWQHLLRKNKNRLSYV
                     DMRYKDGFSVRYASDGLPEKESEE"
     gene            8905..10149
                     /gene="ftsA"
                     /locus_tag="WIX18_000305"
     CDS             8905..10149
                     /gene="ftsA"
                     /locus_tag="WIX18_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEZ5237467.1"
                     /translation="MEQQQRYISVLDIGTSKVLALIGEVQDDDKINIVGLGQAPSRGL
                     RAGMVTNIDATVQAIRQAVNDAELMADTKITHVTTGIAGNHIRSLNSQGVVKIKDGEV
                     TQADIDRAIETAKAINIPPDQKILDAVVQDYIIDTQLGVREPIGMSGVRLDTRVHIIT
                     GASTAVQNVQKCIERCGLKSDQIMLQPLASGQAVLTEDEKDLGVCVIDIGGGTTDIAV
                     YMNGAIRHTSVIPAGGNLITKDLSKSLRTPLDAAEYIKIHYGVASCDTEGLGEMIEVP
                     GVGDRTSRQVSSKVLAAIISARIQEIFGVVLGELQKSGFPKEVLNAGIVLTGGVSMMT
                     GIVEFAEKIFDLPVRTGAPQEMGGLSDRVRTPRFSTAIGLLHAACKLEGNLPQPENGA
                     VQEREGGGGLLARLQRWIENSF"
     gene            10268..11446
                     /gene="ftsZ"
                     /locus_tag="WIX18_000306"
     CDS             10268..11446
                     /gene="ftsZ"
                     /locus_tag="WIX18_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEZ5237468.1"
                     /translation="MEFVYDVAESAVSPAVIKVIGLGGGGCNAINNMVANNVRGVEFI
                     SANTDAQSLAKNHAAKRIQLGTNLTRGLGAGANPDIGRAAAQEDREAIEEAIRGANML
                     FITTGMGGGTGTGSAPVVAEIAKSLGILTVAVVTRPFAYEGKRVHVAQAGLEQLKEHV
                     DSLIIIPNDKLMTALGEDVTMREAFRAADNVLRDAVAGISEVVTCPSEIINLDFADVK
                     TVMSNRGIAMMGSGYAQGIDRARMATDQAISSPLLDDVTLDGARGVLVNITTAPGCLK
                     MSELSEVMKIVNQSAHPDLECKFGAAEDETMSEDAIRITIIATGLKEKGAVDFVPARE
                     VEAVAPSKQEQSHNVEGMIRTNRGIRTMNLTAADFDNQSVLDDFEIPAILRRQHNSDK
                     "
     gene            11584..12894
                     /locus_tag="WIX18_000307"
     CDS             11584..12894
                     /locus_tag="WIX18_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HEZ5237469.1"
                     /translation="MDTSKQTLLDGIFKLKANGTTVRTELMAGLTTFLTMCYIVIVNP
                     LILGETGMDMGAVFVATCIASAIGCFVMGFVGNYPIALAPGMGLNAYFTFAVVKGMGV
                     PWQVALGAVFISGLIFILFSFFKVREMLVNALPMGLKMSIAAGIGLFLALISLKGAGI
                     IVANPATLVGLGDIHQPSALLALFGFVMVVVLGHFRVQGAIIITILTITVIASLMGLN
                     EFHGIIGEVPSIAPTFMQMDFEGLFTVSMVSVIFVFFLVDLFDSTGTLVGISHRAGLL
                     VDGKLPRLKRALLADSTAIVAGAALGTSSTTPYVESAAGVSAGGRTGLTAVTVGVLML
                     ACLMFSPLAKSVPAFATAPALLYVGTQMLRSARDIDWDDMTEAAPAFLTIVFMPFTYS
                     IADGIAFGFISYAVVKLLCRRTKDVPPMVWIVAVLWALKFWYLG"
     gene            13519..14394
                     /gene="prpB"
                     /locus_tag="WIX18_000308"
     CDS             13519..14394
                     /gene="prpB"
                     /locus_tag="WIX18_000308"
                     /EC_number="4.1.3.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylisocitrate lyase"
                     /protein_id="HEZ5237470.1"
                     /translation="MSQHSAGARFRQAVKESNPLAVAGCVNAYFARLATQSGFKAIYL
                     SGGGVAACSCGIPDLGITTMEDVLIDARRITDNVDTPLLVDIDVGWGGAFNIARTIRN
                     FERAGVAAVHIEDQVAQKRCGHRPNKAIVSKDEMVDRIKAAVDARVDENFVIMARTDA
                     LAVEGLDAAIERAQACVEAGADMIFPEAMTDLNMYRQFADAVKVPVLANITEFGSTPL
                     YTQSELAENGVSLVLYPLSSFRAASKAALNVYEAIMRDGTQAAVVDSMQTRAELYEHL
                     NYHAFEQKLDKLFQK"
     gene            14479..15633
                     /gene="prpC"
                     /locus_tag="WIX18_000309"
     CDS             14479..15633
                     /gene="prpC"
                     /locus_tag="WIX18_000309"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HEZ5237471.1"
                     /translation="MTETTQTPTFKPKKSVALSGVAAGNTALCTVGRTGNDLSYRGYD
                     ILDLAQKCEFEEVAHLLIHGHLPNKFELAAYKAKLKSMRGLPIRVIKVLESLPAHTHP
                     MDVMRTGVSMLGCVHPERESHPESEARDIADKLIASLGSILLYWYQYSHNGKRIEVES
                     DEETIGGHFLQLLHGKRPSESHIKAMHVSLILYAEHEFNASTFTARVIAGTGSDMYSS
                     ITGAIGALKGPKHGGANEVAYDIQKRYRNADEAEADIRERIGRKEIVIGFGHPVYTIS
                     DPRNVVIKEVARGLSKETGDMRLFDIAERLESVMWEEKKMFPNLDWFSAVSYQKLGVP
                     TAMFTPLFVISRTTGWSAHVLEQRKDGKIIRPSANYTGPEDLAFVEIEDR"
     gene            16045..16767
                     /locus_tag="WIX18_000310"
     CDS             16045..16767
                     /locus_tag="WIX18_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HEZ5237472.1"
                     /translation="MDKDKGSYAGIPVQNTKELVWQKIQEIPISECGEPLVSVGNTGR
                     IRVNPVYFSQGIEGAINTVLLRRSVADRLTQVVSLLPEMYGLEIFDGWRPVIVQRALR
                     ENMKQEIEKRHPEYDEVQVREALDCFAADPDRAGMPLPHLTGGSVDVGLFDIKSGKSL
                     DMGSEFDATGHLSYSDALEKEGEYFSSARNLRRILIHAMKEAGFSNLPTEWWHFDYGN
                     QNWAYFTQQSNAVFGAVEEQDT"
     gene            16793..17998
                     /locus_tag="WIX18_000311"
     CDS             16793..17998
                     /locus_tag="WIX18_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF819 domain-containing protein"
                     /protein_id="HEZ5237473.1"
                     /translation="MQTLISADNHLLLWAFVMLAAAAAIFIEQNSRLAGKVPGAVLAL
                     LIALIASNLGVIPTDAPVFDAVWSYIVPLAIPLLLFQLDLHALFKESGRMLFIFLISS
                     LGTVIGTLVSFALLKNYIPELDKVAGMISASYTGGGVNFAAMSAKLNPAKDVIAATIV
                     ADNLMMACYFFILIGISSSYWVRKVWGSPYQDKLEQEYHDPSVNKAAEYWKPKSISLQ
                     SIALSLAASILLVAVSFSLSSFLQNHFQSVDGVALKMLTGLISDKYLLLTTFTLAVVL
                     FFRKGIQKLDGSQELGTYCIYLFFVVIGVPASIPLIIKTAPLLFVFTLIIAVLNLLLT
                     LVLGKLFKFSIEEIVLACNANIGGPTTAAALAISKGWRDLVGAILLIGTVGYIIGNYI
                     GSFVYALLS"
     gene            18102..20708
                     /gene="acnD"
                     /locus_tag="WIX18_000312"
     CDS             18102..20708
                     /gene="acnD"
                     /locus_tag="WIX18_000312"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe/S-dependent 2-methylisocitrate dehydratase
                     AcnD"
                     /protein_id="HEZ5237474.1"
                     /translation="MAANQRYRKPLPGTDLEYYDARAACEDIKPGSYDKLPYTSRILA
                     ENLVNRADKVDLPTLQSWLGQLIEGKQEIDFPWYPARVVCHDILGQTALVDLAGLRDA
                     IAEKGGDPAKVNPVVQTQLIVDHSLAVECGGYDPDAFRKNREIEDRRNEDRFHFINWT
                     KTAFENVDVIPAGNGIMHQINLEKMSPVVQVKNGVAFPDTCVGTDSHTPHVDALGVIS
                     VGVGGLEAETVMLGRASMMRLPDIVGVELTGKRQPGITATDIVLALTEFLRKERVVGA
                     FVEFFGEGARSLSIGDRATISNMTPEFGATAAMFAIDEQTIDYLKLTGRDDAQVKLVE
                     TYAKTAGLWADALKTAVYPRVLKFDLSSVTRNMAGPSNPHARFATADLAGKGLAKPYE
                     EPSDGQMPDGAVIIAAITSCTNTSNPRNVVAAALLARNANRLGLQRKPWVKSSFAPGS
                     KVAEIYLKEAGLLPEMEKLGFGIVAFACTTCNGMSGALDPKIQKEIIDRDLYATAVLS
                     GNRNFDGRIHPYAKQAFLASPPLVVAYALAGSIRFDIENDVLGVADGKEIRLKDIWPA
                     DEEIDAVVAEYVKPQQFRDVYVPMFDTGTAQKAPSPLYDWRPMSTYIRRPPYWEGALA
                     GERTLRGMRPLAILPDNITTDHLSPSNAILAVSAAGEYLAKMGLPEEDFNSYATHRGD
                     HLTAQRATFANPKLFNEMVKNEDGSVRQGSFARVEPEGETMRMWEAIETYMNRKQPLI
                     IIAGADYGQGSSRDWAAKGVRLAGVEAIVAEGFERIHRTNLIGMGVLPLQFKPGTNRH
                     TLQLDGTETYDVVGERTPRCDLTLVIHRKNGETVEVPVTCRLDTAEEVLVYEAGGVLQ
                     RFAQDFLEGVVA"
     gene            20795..21241
                     /locus_tag="WIX18_000313"
     CDS             20795..21241
                     /locus_tag="WIX18_000313"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237475.1"
                     /translation="MKTQEDEVTKQKIFNHMINNKSFLNFQFWTFAALSAGSFAFLIS
                     AANIDSKDRDLTLEIAIVGYSVSLILNSILCFLIRGIEDDELSVKMLNEFNLDKRTFW
                     IPILATWSFALSTLFLLFTISLVGAITALIMAVLAIISFIKFTKKS"
     gene            21405..22574
                     /gene="prpF"
                     /locus_tag="WIX18_000314"
     CDS             21405..22574
                     /gene="prpF"
                     /locus_tag="WIX18_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylaconitate cis-trans isomerase PrpF"
                     /protein_id="HEZ5237476.1"
                     /translation="MPQIKIPAVYYRGGTSKGIFFKRTDLPEAAQQAGEARDKILLRV
                     LGSPDPYGKQIDGLGNASSSTSKAVILDKSERADHDVDYLFGQVSIDKPFVDWSGNCG
                     NLTAAVGAFSIEQGLVDKGKIPSDGICTVKIWQKNIGKTIIAHVPMQNGAVLETGDFE
                     LDGVTFPAAEVQIEFLDPADGEGSMFPTGNLVDEIDVPNIGRLKATLINAGIPTVFLN
                     AADLGYTGKELQDDINNDAAALEKFEKIRAYGALKMGLISDVSEAAARAHTPKVAFVA
                     PAADYTASSGKTVNAADIDLLVRALSMGKLHHAMMGTASVAIATAAAVPGTLVNLAAG
                     GGTRKEVRFGHPSGTLRVGAAAECQDGQWTATKAVMSRSARVMMEGWVRVPEDCF"
     gene            22988..24187
                     /locus_tag="WIX18_000315"
     CDS             22988..24187
                     /locus_tag="WIX18_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HEZ5237477.1"
                     /translation="MSDQLILVLNCGSSSLKGAVIDRKSGSVVLSCLGERLTTPEAVI
                     TFSKDGNKRQVPLSGRNCHAGAVGMLLNELEKHGLHDRIKAVGHRIAHGGEKYSESVL
                     IDQAVMDELNACIPLAPLHNPANISGILAAQEHFPGLPNVGVMDTSFHQTMPERAYTY
                     AVPRELRKKYAFRRYGFHGTSMRYVAPEAARILGKPLEDIRMIIAHLGNGASITAIKN
                     GKSVDTSMGFTPIEGLVMGTRCGDIDPGVYSYLTSHAGMDVAQVDEMLNKKSGLLGIS
                     ELSNDCRTLEIAADEGHEGARLALEVMTYRLAKYIASMAVGCGGVDALVFTGGIGENS
                     RNIRAKTVSYLDFLGLHIDTKANMEKRYGNSGIISPTDSSPAVLVVPTNEELMIACDT
                     AELAGIL"
     gene            24295..24915
                     /locus_tag="WIX18_000316"
     CDS             24295..24915
                     /locus_tag="WIX18_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HEZ5237478.1"
                     /translation="MAQFFAVHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKL
                     GDKAAMERILSIRKIDLKHHLTLMCADLSELGTYAKVDNVQFRQLKAATPGPYTFILQ
                     ATKDVPARTLHPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEI
                     RERLEHAVDLVIDGGWCGTEPTTVVDMTDGTELVRQGCGDTAVFGL"
     gene            complement(25042..25485)
                     /locus_tag="WIX18_000317"
     CDS             complement(25042..25485)
                     /locus_tag="WIX18_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEZ5237479.1"
                     /translation="MYLTQHTDYGLRVLIYTAINDDALVNISTIAVTYGISKSHLMKV
                     VTALVKGGFLHSVRGKGGGLRLAAPPDRINIGSVVRHLEPMQLVECMGENNECLITPS
                     CRLTGILGGAMKSFFTYLDGFTLQDLLNKPTYDLLYEPRIPIAVQ"
     gene            25659..26027
                     /locus_tag="WIX18_000318"
     CDS             25659..26027
                     /locus_tag="WIX18_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEZ5237480.1"
                     /translation="MKPLKRHPALIGLSRDHHHSLSLCVRLLRTPEERHRDELEPHFS
                     ELETHFREEEAKFAPIWQNVAPELKQRFEKDHARLRQMMASPEYGNAAWNTAFATTLR
                     DHARFEERELFPAAEPFLPA"
     gene            26072..27226
                     /locus_tag="WIX18_000319"
     CDS             26072..27226
                     /locus_tag="WIX18_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HEZ5237481.1"
                     /translation="MKFTKHPVWAMAFRPFYSLAALYGALSVLLWGFGYTGTHELSGF
                     YWHAHEMIWGYAGLVVVAFLLTAVATWTGQPPTRGGVLVGLTIFWLAARIAAFIPGWG
                     ASASGILGTLFFWYGAVCMALPVIRSQNQRNYVAVFALFVLGGTHAAFHVQLHNGNLG
                     GLLSGLQSGLVMVSGFIGLIGTRIISFFTSKRLNVPQIPSPKWVAQASLWLPMLTAML
                     MAHGVMPWLSAAFAFAAGVIFTVQVYRWWYKPVLKEPMLWILFAGYLFTGLGLIAVGA
                     SYFKPAFLNLGVHLIGVGGIGVLTLGMMARTALGHTGNPIYPPPKAVPVAFWLMMAAT
                     AVRMVAVFSSGTAYTHSIRTSSVLFALALLVYAWKYIPWLIRPRSDGRPG"
     gene            complement(27283..28155)
                     /locus_tag="WIX18_000320"
     CDS             complement(27283..28155)
                     /locus_tag="WIX18_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HEZ5237482.1"
                     /translation="MPILNHIALIGVGLIGGSFVLDLKRQGLVRTVTGIDTDRDNLER
                     ALERGVIDRASVAIDADSIGGADLVLIATPVATFPAILTALRPVLPEHTWISDVGSTK
                     SSVIEAFRRCLPDRLHRCIAAHPIAGSDRSGAQAAQFGLFRHRKLIITPHGGEHSDGI
                     ALVEELWHAVGAEIYTMDAQRHDAVFAAVSHMPHLTAFAYVHQILDHPDGQEYLKFAA
                     TGFRDFTRIASGHPAVWADICLANKDSLLQLVQGLGKQLDVLANILTTDDREALYRYF
                     EEAKTTRDRWLDGN"
     gene            28240..29052
                     /locus_tag="WIX18_000321"
     CDS             28240..29052
                     /locus_tag="WIX18_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HEZ5237483.1"
                     /translation="MDKIRVAAVQMVSGVSPETNVAAMKRLVARAAEQGVDWVLLPEY
                     WVLMGANDTDKLALAEPLGGGRFQTALSETAKECGVVLFGGTVPLQSPEAGKVMNTLL
                     VYGRDGKRTGLYHKMHLFGFSGLGERYAEADTIRAGGEVPHLSAEGVPVAAGICYDVR
                     FPEFFRRQLPFDVLMLPAAFTHTTGKAHWELLLRARAVENQCYVVAAAQGGLHENGRR
                     TFGHSMIVDPWGDVLDVLPEGEGIVTADIDANRLNSVRNRLPALKYRVLDAV"
BASE COUNT         6878 a         7417 c         8079 g         7110 t
ORIGIN      
        1 ttagagaatc gttctctttg agctaaggcg aggcaacgcc gtactggttt ttgttaatcc
       61 actataacga caaaacaaaa aaaggaagcc ccatgttttt atggctcgca catttcagca
      121 actggttaac cggtctgaat atttttcaat acaccacatt ccgcgccgtc atggcggcgt
      181 tgaccgcctt ggcgttttcc ctgatgttcg gcccgtggac gatacgcagg ctgaccgcgc
      241 tcaaatgcgg gcaggcagtg cgtaccgacg gcccgcaaac ccacctcgtc aaaaacggca
      301 cgccgacgat gggcggttcg ctgattctga ccgccattac cgtgtccacc ctgttgtggg
      361 gcaactgggc gaacccgtat atctggattc tcttgggcgt attgctcgct accggcgcac
      421 tcggttttta cgacgactgg cgcaaagtcg tctataaaga ccccaacggc gtgtccgcca
      481 aattcaaaat ggtgtggcag tcaagcgttg ccattatcgc cggtttggca ttgttttacc
      541 ttgccgccaa ttccgccaac aatattttga ttgtcccgtt cttcaaacaa atcgccctgc
      601 cgctgggcgt ggccggcttt ttggtgttgt cttacctgac catcgtcggc acatccaacg
      661 ccgtcaatct caccgacggc ttggacggcc ttgccgcctt ccccgtcgtc ctcgttgccg
      721 ccggactcgc cattttcgcc tacgtcagcg gacactacca attttcccaa tacctgcaat
      781 taccttacgt tgccggcgca aacgaagtgg tgattttctg taccgccatg tgcggcgcgt
      841 gcctcggttt cttgtggttt aacgcctatc ccgcgcaagt ctttatgggc gatgtcggtg
      901 cattggcatt gggtgccgcg ctcggtaccg tcgccgtcat cgtccgccaa gagtttgtcc
      961 tcgtcattat gggcggatta tttgtcgtag aagccgtatc cgttatgctt caggttggct
     1021 ggtataagaa aaccaaaaaa cgcatcttcc tgatggcgcc catccatcac cactacgaac
     1081 aaaaaggctg gaaagaaacc caagtcgtcg tccgcttttg gattattacc atcgtcttgg
     1141 tgttgatcgg tttgagtacc ctcaaaatcc gctgaaccta tgccgtctga acacctttca
     1201 gacggcattt gaacgcgcaa taaacctgcg gcgacaatcc gcccagccct atcgttaacg
     1261 gcggcttata ctaaaacaga agtaaaacca tgaaacagac agtcaaatgg cttgccgccg
     1321 ccctgattgc cttgggcttg aaccaagcgg tgtgggcgga tgacgtatcg gattttcggg
     1381 aaaacttgca ggcggcagca cagggaaatg cagcagccca atacaatttg ggcgcaatgt
     1441 attacaaagg acgcggcgtg cgtcaagacc ttgtgctcgc tcaagaatgg tttggtaagg
     1501 cttgtcaaaa cggagaccaa gacggctgcg acatttacca acgcctgaag gcaggttatt
     1561 gaacagcccg cgatgccgtc tgaaagcggc ttgggcaggg gcggacatcc ccccacctgc
     1621 ccaatatgat ttgttttagg acaaaaccaa aatgacgctt gaaaacaaaa aaatcctcgt
     1681 cgccggactc ggcggtacgg gtatttccat gattgcctat ctgcgcaaaa acggcgcgga
     1741 ggtggccgct tatgatgcgg agttgaagcc cgagcgcgtg tcgcaaatcg gtaagatgtt
     1801 tgacgggctg gtgttttaca caggccgtct gaaagatgcg ctggacaacg gtttcgatat
     1861 tttggcactc agccccggca tcagcgagcg tcagccggat attgaggcgt tcaagcaaaa
     1921 cggcggacgc gtgttgggcg acatcgaatt gctggcggac attgtgaacc gccggggcga
     1981 caaggtaatt gcgattaccg gcagcaacgg caaaaccacg gtaacgagcc tggtcggcta
     2041 tctctgtatc aagtgcgggc tggataccgt tatcgcgggc aatatcggca cgccggtttt
     2101 ggaggcggaa tggcagcgcg aaggcaaaaa ggcggacgtg tgggtgttgg agctttccag
     2161 cttccaactg gaaaacaccg aaagcctgcg cccgacggcg gcgacggtac tgaatatttc
     2221 cgaagaccat ctcgaccgct acgacgactt gctcgactac gcgcatacca aagccaagat
     2281 tttccgtggc gacggtgtgc aggttttgaa tgcggacgat gcgttctgcc gtgccatgaa
     2341 acgtgccggg cgcgaggtaa aatggttttc gttggaacac gaagccgatt tttggttgga
     2401 acgtgagaca ggccgcctga aacaaggcaa tgaagatttg attgccacgc aagatattcc
     2461 gttgcaaggc ttgcacaacg ccaccaacgt gatggctgcc gttgccttgt gcgaagctgt
     2521 cggtttgccg cgcgaagcat tgctcgaaca cgtcaaaacc tttcaaggcc tgccgcaccg
     2581 cgtggaaaaa atcggcgaga aaaatggcgt ggtgtttatc gatgacagca aaggcacgaa
     2641 cgtcggtgcg accgccgccg cgattgccgg tttgcaaaat ccgctcttcg tgattttagg
     2701 cggcatgggc aaagggcagg acttcacgcc tctgcgcgac gcgcttgccg gcaaggcaaa
     2761 aggcgtgttc ctgatcggcg ttgatgcgcc gcaaatccgc cgcgatttgg acggctgcgg
     2821 tctgaatatg accgactgcg ccactttgga agaagccgtt cagacggcat atgcccaagc
     2881 cgaagcgtgc gatatcgtgc tgctcagccc ggcttgtgcg agttttgata tgtttaaagg
     2941 ctacgcgcac cgttcggaag tgtttatcga agcgtttaag gctttgtgat gccgtctgaa
     3001 atgcaaacgc cgtcattgtt gggcggcaag taaagattta gaataccgat ttgggatgta
     3061 tcgtatgttc ggacggcatt gtctgccgtc tgaaattttt gccctttgcg gcaggtgcaa
     3121 acagaatgac aggtggtttt ttgaagattt cggaagtatt ggtaaaagtg ggcgacggtg
     3181 tccacactct gctgctcgac aggcagattg tgcgcgacgg caggaaattc gacgcgccgc
     3241 ttttgtggat ggtggtgctg atgacggcgt tcagcctgct gatgatttat tcggcttctg
     3301 tgtatttggc atcaaaagaa ggcggcgatc agtttttcta tttgaccaga caggcggggt
     3361 tcgtcgttgc cggcttgata gcgagcggtt ttttatggtt tctttgcagg atgaggacat
     3421 ggcggcggct tgtgccgtgg atttttgcct tatccggcct gttgctggta gtcgtattga
     3481 ttgccgggcg cgaaatcaat ggcgcgaccc gttggatacc tttgggtccg ttgaatttcc
     3541 agccgaccga gctgttcaag ctggcggtca tcctttattt ggcaagcctg ttcacgcgcc
     3601 gtgaagaagt gttgcgcagc atggaaagtt tgggttggca gtcgatttgg cgggggacgg
     3661 ccaatctgat catgtccgcc accaatccgc aggcacgtcg tgaaacatta gaaatgtacg
     3721 gccgtttccg ggcgatcatc ctgccgatta tgctggtggc gttcggtttg gtgctgataa
     3781 tggtacagcc ggatttcggt tcgtttgtcg tcattaccgt cattgccgtt ggaatgctgt
     3841 ttttggcagg attgccgtgg aaatattttt tcgtcctggt aggcagcgtc ttgggcggga
     3901 tggtgctgat gattaccgcc gctccctacc gtgtgcagcg ggtagtggca tttttggacc
     3961 cgtggaaaga cccgcagggt gccggctacc agcttaccca ctctctgatg gcaatcgggc
     4021 gcggagagtg gttcggtatg ggtttgggtg cgagtttgag caaacgcggc tttctgccgg
     4081 aagcgcatac cgattttatt tttgccatca tcgccgaaga attcggtttc ttcggtatgt
     4141 gcgtgctgat attctgttac ggctggctgg tggtgcgggc gttttccatc ggcaagcagt
     4201 cgcgcgattt gggtttgact ttcaacgcct atatcgcttc gggtatcggc atttggatcg
     4261 gtatccaaag tttcttcaat atcggtgtga acatcggtgc tttgccgacc aaaggtctga
     4321 cgctgccgtt gatgtcctat ggcggttcgt cagtcttttt catgctgatc agcatgatgc
     4381 tgctgttgcg tatagattat gaaaaccgcc ggaaaatgcg cggttatcgg gtggagtaaa
     4441 tcatgggcgg taaaaccttt atgctgatgg cgggcggaac gggcggacat attttccccg
     4501 cgctggcggt ggcggattca ttgcgcgcgc gcggccatca tgtgatttgg ctgggcagca
     4561 aggattcgat ggaagagcgt atcgtgccgc aatacggcat acgcttggaa acgctggcga
     4621 ttaaaggcgt gcgcggcaac ggcatcaaac gcaagctgat gctgccgttt actttgtatc
     4681 aaaccgtccg cgaagcgcag cggattatcc gcaaacaccg tgtcgagtgc gtcatcggct
     4741 tcggcggctt cgttaccttc cccggcggtt tggcggcgaa gctattaggc gtgccgattg
     4801 tgattcacga gcaaaacgcc gtggcaggtt tgtccaaccg ccacctgtcg cgctgggcga
     4861 agcgggtgtt gtacgctttt ccgaaagcgt tcagccacga aggcggcttg gtcggcaacc
     4921 ccgtccgcgc cgatattagc aacctgcccg cgcctgccga acgcttccaa gggcgtaaag
     4981 gccgtctgaa aattttggtg gtcggcggca gtttgggcgc ggacgttttg aacaaaaccg
     5041 taccgcaggc attggctttg ctgcccgaca atgcgcgtcc gcagatgtac caccaatcgg
     5101 gacggggcaa gctgggcagc ttgcaggcgg attacgacgc gctgggcgtg aaagccgaat
     5161 gcgtggaatt tattaccgat atggtgtccg cctaccgcga tgccgatttg gtgatttgcc
     5221 gtgccggcgc gctgacgatt gccgagttga cggcggcggg attgggtgcg ttgttagtgc
     5281 cgtatcctca cgccgttgat gaccatcaaa ccgccaacgc gcgttttatg gtgcaggcag
     5341 aagcaggact gctgttgccg caaacccagt tgacggcgga aaaactcgcc gaaatcctcg
     5401 gcagcctgaa ccgcgaaaaa tgtctcaaat gggcggaaaa cgcccgtact ttggcattgc
     5461 cgcacagcgc ggacgacgtt gccgaagccg cgattgcgtg tgcggcgtaa actgccgaac
     5521 catgccgtct gaaatgccgt ccagacagca tggatgtttt ttatttcaat ccgctatata
     5581 tttgtcagaa aactatggcg cgcaaacggt cagcccttta aaataacgcc tttacgcatc
     5641 gaaaatccac cggaacgcaa cattatgatg aaaaatcgag tgaccaacat ccattttgtc
     5701 ggtatcggcg gcgtcggcat gagcggcatc gccgaagtct tgcacaattt gggttttaaa
     5761 gtttccggtt cggatcaggc gcgtaatgcc gctaccgagc atttgggcag cctgggcatt
     5821 caagtttatc ccggccatac cgcagaacac gttaacggtg cggatgtcgt cgttacctct
     5881 accgccgtca aaaaagaaaa tcccgaagtt gtcgctgcgt tggagcagca aattcccgtt
     5941 attccgcgcg ccctgatgtt ggcggagttg atgcgcttcc gtgacggcat cgccattgcc
     6001 ggcacgcacg gcaaaaccac gaccaccagc ctgaccgcct ccatcctcgg cgcggcagga
     6061 cttgacccga ctttcgttat cggcggcaaa ctcaacgccg caggcaccaa cgcccgcttg
     6121 ggcaaaggcg aatacatcgt tgccgaagcc gacgagtcgg atgcatcctt tctgcacctg
     6181 acaccgatta tgtccgtcgt taccaatatc gacgaagacc atatggatac ctacgggcac
     6241 agcgtcgaaa aactgcatca ggcgtttatc gatttcatcc accgtatgcc cttctacggc
     6301 aaagcctttt tgtgtattga cagcgaacac gtccgcgcga ttttgcccaa agtgagcaaa
     6361 ccttatgcta cttacggttt ggacgatacc gccgacatct acgccaccga catcgaaaac
     6421 gtcggcgcgc aaatgaaatt caccgtccat gttcaaatga aaggacatga gcaggggtcg
     6481 tttgaagtcg tgctgaatat gcccggcaga cacaacgtgc tgaacgcatt ggcagccatc
     6541 ggcgtggcgc tggaagtcgg cgcatcggtt gaagcgatcc aaaaaggctt gctcggcttt
     6601 gaaggtgtcg gccgccgctt ccaaaaatac ggcgacatca agttgccaaa cggcgggacc
     6661 gcgctcttgg tggacgacta cggacaccac cccgtcgaaa tggcggcgac ccttgccgcc
     6721 gcacgcggcg cgtatccgga aaaacgtttg gtactcgcct tccagccgca ccgctatacc
     6781 cgcacgcgcg atttgtttga agactttacc aaagtcctca ataccgttga cgcgctggtg
     6841 ctgaccgaag tttatgccgc cggtgaagag ccgattgccg ccgccgattc ccgcgctctt
     6901 gcccgcgcca tccgcgtgtt gggcaaactc gagccgattt actgcgaaaa cgttgccgat
     6961 ctgcccgaaa tgctgttgaa cgttttgcag gacggcgaca tcgtgttgaa tatgggtgcg
     7021 ggaagcatca accgcgtccc cgccgcgctg ctggaattgt cgaaacagat ttgaggcaca
     7081 cccgcctgac agacggaaca tcatataaag gttgtctgaa accgcaaatc aggtttcaga
     7141 cgacctctgg caacaagcat aaagcaatca ggaaagaaca aaaacaatgc agaattttgg
     7201 caaagtggcc gtattgatgg gcggtttttc cagcgaacga gaaatctcgc tggacagcgg
     7261 caccgccatt ttgaatgctt taaaaagcaa aggcatagac gcatatgcct tcgatcctaa
     7321 agaaacccca ttgtctgaat tgaaggcaca aggttttcag acggcattca acatccttca
     7381 cggtacttac ggcgaagacg gggcggttca gggtgcattg gaactgttgg gcattcccta
     7441 taccggcagc ggtgtcgccg catccgccat cggcatggac aaataccgct gcaaactgat
     7501 ttggcaggca ttgggactgc ccgttcccga gttcgccgtc ctgcacgacg acactgattt
     7561 cgatgccgtc gaagaaaaat tgggcctgcc gatgtttgtg aaaccggcgg ccgaaggcag
     7621 cagcgtaggc gtggtaaaag tcaaaggaaa aggccgtctg aaaagcgttt acgaagaatt
     7681 gaaacacctt cagggcgaaa tcattgccga acgttttatc ggcggcggcg aatattcctg
     7741 ccccgtcctg aacggcaaag ggctgcccgg catacacatc attcccgcaa ccgagtttta
     7801 cgactacgaa gccaagtaca accgcgacga caccatttat caatgtcctt cggaagattt
     7861 gaccgaagcc gaagaaagcc tgatgcgcga actggcggtt cgcggcgcgc aggcaatcgg
     7921 tgcggaaggc tgcgtgcgcg tcgatttcct caaagatacc gacggcaaac tctatctgtt
     7981 ggaaatcaac accctgcccg gtatgacgag ccatagttta gtaccgaaat ccgctgccgt
     8041 tacgggcgtg ggttttgccg atttatgtat tgaaattttg aagaccgcac atgtgggata
     8101 atgccgaagc gatggaacgg ctgacgcgct ggctgcttgt catgatggcg atgctgcttg
     8161 ctgcgtccgg gctggtttgg ttttacaatt cgaatcatct gcccgtcaag caggtgtcgc
     8221 tgaagggcaa cctggtttat tccgataaga aggcattggg cagtttggcg aaagaataca
     8281 tccatgggaa tattttgagg acggacatca atggcgcaca ggaggcctac cgccggtatc
     8341 cgtggattgc gtcggtcatg gtgcgccgcc gttttcccga cacggttgag gtcgtcctga
     8401 ccgagcgcaa gccggtcgcg cgttggggcg accatgcctt ggtggacggc gaaggcaatg
     8461 tttttgaagc ccgcttggac agacccggaa tgccggtatt cagaggcgcg gaaggaacgt
     8521 ctgccgaaat gctccgccgt tatgacgaat tttcgactgt tttggcaaaa cagggtttgg
     8581 gcatcaaaga gatgacctat acggcacgtt cggcgtggat tgtcgttttg gacaacggca
     8641 tcaccgtcag gctcggacgg gaaaacgaga tgaaacgcct ccggcttttt accgaagcgt
     8701 ggcagcatct gttgcgtaaa aataaaaatc ggttatccta tgtggatatg aggtataagg
     8761 acggattttc agtccgctat gcttccgacg gtttacccga aaaagaatcc gaagaatagt
     8821 gggaacaggt atcggacaga ttacggccgt gccgtctgaa acggtgcgac gcaaatttca
     8881 atcagtttta agagcagacg aacaatggaa cagcagcaaa gatacatcag cgtactggat
     8941 atcggtacgt ctaaagtcct cgcactgatc ggggaagttc aagatgacga caaaatcaac
     9001 atcgtcggtt tggggcaggc tccttcacgg ggcttgcgcg cgggcatggt aaccaatatc
     9061 gatgccaccg tccaagccat caggcaggcg gtcaatgatg ccgagctgat ggcggatacc
     9121 aaaattaccc acgttaccac aggtatcgca ggcaaccaca tccgcagtct caattcgcaa
     9181 ggtgtggtta aaattaaaga cggggaagtc acgcaggcag acatcgaccg cgccattgaa
     9241 acggcaaagg caatcaatat cccgcccgat caaaaaattc tcgatgccgt ggttcaagac
     9301 tacattatcg acacccaact tggcgtgagg gagcccatcg gtatgagcgg tgtgcgtctg
     9361 gatacgcggg tgcacatcat taccggtgca agtacggcag tgcagaatgt ccaaaaatgt
     9421 atcgagcggt gcggtttgaa aagcgatcag attatgcttc agccgttggc aagcgggcag
     9481 gcggtgctga ctgaagatga aaaagacctc ggtgtatgcg tcatcgacat tggtggcgga
     9541 acgaccgata ttgccgttta tatgaacggc gccatccgcc atacgtccgt cattccggcc
     9601 ggtggtaatc tgattaccaa agatttgtcc aaatcgttga gaacacctct cgatgccgcc
     9661 gagtacatta aaatccatta tggcgtggca tcatgcgata cggaaggctt gggtgagatg
     9721 attgaagttc cgggcgtggg tgaccggaca tcgcgtcagg tttccagtaa ggttttggca
     9781 gcaatcatca gtgcacgtat tcaggagatt tttggcgtag tgctgggcga gctgcaaaaa
     9841 tcgggtttcc ccaaagaagt gctgaatgcg ggtatcgttc tgaccggcgg tgtgtccatg
     9901 atgaccggga ttgtggaatt tgccgaaaaa atcttcgatt tgcctgtacg caccggtgca
     9961 ccccaagaaa tgggcggttt gtccgaccgc gtccgcacac cgcgtttttc taccgctatc
    10021 gggctgcttc atgcagcatg caagctggaa ggaaacttgc cgcagccgga aaacggtgca
    10081 gtgcaagaga gggaaggggg cggcggtttg ttggcaagat tgcaacggtg gattgaaaac
    10141 agcttctgaa caggtggatt gccgtttgac aggtgagaag tattttgcca gcagcaagat
    10201 acttcttata taatgaataa taatttattt aaaccgtcct ctgaatgggg cgagcaggag
    10261 tttttgaatg gaatttgttt acgacgtggc agaatcggca gtcagccctg cggtgattaa
    10321 agtaatcggc ttgggcggcg gcggttgcaa tgcaatcaat aacatggttg ccaacaatgt
    10381 gcgcggtgtg gagtttatca gtgccaatac ggatgcgcag tctctggcaa aaaaccatgc
    10441 ggcgaagaga atccagttgg gtacgaatct gacacgcggt ttgggcgcgg gcgcgaatcc
    10501 cgatatcggc cgtgcggcag cccaggaaga ccgggaagcc attgaagaag ccattcgcgg
    10561 tgcgaatatg ctgtttatca cgaccggtat gggcggcggt accggtaccg gttccgcgcc
    10621 ggttgttgct gagattgcca agtctttggg cattctgacc gttgccgtgg ttacccgacc
    10681 gttcgcatat gaaggtaagc gcgtccatgt cgcacaggca gggttggaac agttgaaaga
    10741 acacgtcgat tcgctgatca tcatcccgaa cgacaaactg atgactgcat tgggtgaaga
    10801 cgtaacgatg cgcgaagcct tccgtgccgc cgacaatgta ttgcgcgatg cggtcgcagg
    10861 catttccgaa gtggtaactt gcccgagcga aatcatcaac ctcgactttg ccgacgtgaa
    10921 aaccgtgatg agcaaccgcg gtatcgctat gatgggttcg ggttatgccc aaggtatcga
    10981 ccgtgcgcgt atggcgaccg accaggccat ttccagtccg ctgctggacg atgtaacctt
    11041 ggacggagcg cgcggtgtgc tggtcaatat tacgactgct ccgggttgct tgaaaatgtc
    11101 cgagttgtcc gaagtcatga aaatcgtcaa ccaaagcgcg catcccgatt tggaatgcaa
    11161 attcggtgcg gctgaagacg agaccatgag cgaagatgcc atccggatta ccattatcgc
    11221 taccggtctg aaagaaaaag gcgcggtcga ttttgttccg gcaagggagg tagaagcggt
    11281 tgccccgtcc aaacaggagc aaagccacaa tgtcgaaggt atgatccgca ccaatcgcgg
    11341 tatccgcacg atgaacctta ccgctgcgga tttcgacaat cagtccgtac ttgacgactt
    11401 tgaaatccct gctattttgc gtcgtcaaca caattcagac aaataatgtg ctgtttgccc
    11461 gtaaacctgc tgcctcccga atcggtttgt ccggtttggg aggtatgttt ttcaagatgt
    11521 tgcaatttcg tacggtttgc ggtcggcgga ttcagatttt tccacttgat acagacttca
    11581 gatatggaca cttcaaaaca aacactgttg gacgggattt ttaagctgaa ggcaaacggt
    11641 acgacggtgc gtaccgagtt gatggcgggt ttgacaactt ttttgacgat gtgctacatc
    11701 gttatcgtca accctctgat tttgggcgag accggcatgg atatgggggc ggtattcgtc
    11761 gctacctgta tcgcgtctgc catcggctgt tttgttatgg gttttgtcgg caactatccg
    11821 attgcactcg caccggggat ggggctgaat gcctatttca cctttgccgt cgttaagggt
    11881 atgggcgtgc cttggcaggt tgcgttgggt gcggtgttca tctccggtct gatttttatc
    11941 ctgttcagct tttttaaagt cagggaaatg ctggtcaacg cactgcctat gggtttgaaa
    12001 atgtcgattg ctgccggtat cggtttgttt ttggcactga tttccctgaa aggcgcaggc
    12061 attatcgttg ccaatccggc aaccttggtc ggcttgggcg atattcatca gcccagcgca
    12121 ctgttggcat tgttcggttt tgtcatggtg gtcgtattgg ggcatttccg cgttcaaggc
    12181 gcaatcatca tcaccattct gacgattacc gtcattgcca gcctgatggg tttgaatgaa
    12241 tttcacggca tcatcggcga agtaccgagc attgcgccga cttttatgca gatggatttt
    12301 gaaggcctgt ttaccgtcag catggtcagt gtgattttcg tcttcttctt ggtcgatcta
    12361 tttgacagta ccggaacgct ggtcggcata tcccaccgtg ccgggctgct ggtggacggt
    12421 aagctgcccc gcctgaaacg cgcactgctt gcagactcta ccgccattgt ggcaggtgcg
    12481 gctttgggta cttcttccac cacgccttat gtggaaagcg cggcgggcgt atcggcaggc
    12541 ggacggaccg gcctgacggc ggttaccgtc ggcgtattga tgctcgcctg cctgatgttt
    12601 tcacctttgg cgaaaagtgt tcccgctttt gccaccgcgc ccgccctgct ttatgtcggc
    12661 acgcagatgc tccgcagtgc gagggatatt gattgggacg atatgacgga agccgcaccc
    12721 gcattcctga ccattgtctt catgccgttt acctattcga ttgcagacgg catcgccttc
    12781 ggcttcatca gctatgccgt ggttaaactt ttatgccgcc gcaccaaaga cgttccgcct
    12841 atggtatgga ttgttgccgt attgtgggca ctgaaattct ggtatttggg ctgattgatt
    12901 cgatattaaa aatgccgtct gaaaggtttt cagacggcat tttgtttgcc gatatattta
    12961 atttttatta aattatataa aaatcaaata gataataaac tacatcagat tacttaaaaa
    13021 taatacattg tttttatgta taaaatattt tataaggttt caggattttg attatcgaaa
    13081 atttttcttg atttcctgac aattttattg aaacaaataa ttcaaaatta atctagttta
    13141 atcatggaat taaaataaaa tattaaaatt atgtaatgag tctccttaaa aatgtttgac
    13201 attttcagtc ttgtgtttta gattagcgaa aaataaaact acacaatact acaaaggaac
    13261 attactatga aaccaattca gatgttttcc ccttttctga ataatcccct tgttttcttc
    13321 ttgtctgcgg ttttgccgca taattccgaa cggtctgctg tttttctttg attcgtttta
    13381 aatatcaata agataattgt tctcatatat ttttaatgat tggattggga tgcccgacgc
    13441 gtcggatggc tgtgttttgc cgtccgaatg tgatggaagc ctgtccatac tgaaaaaagt
    13501 ctataaagga gaaatatgat gagtcaacac tctgccggag cacgtttccg ccaagccgtg
    13561 aaagaatcga atccgcttgc cgtcgccggt tgcgtcaatg cttattttgc acgattggcc
    13621 acccaaagcg gtttcaaagc catctatctg tccggcggcg gcgtggcagc ctgttcttgc
    13681 ggtatccctg atttgggcat taccacaatg gaagatgtgc tgatcgacgc acgacgcatt
    13741 acggacaacg tggatacgcc tctgctggtg gacatcgatg tgggttgggg cggtgcattc
    13801 aatattgccc gtaccattcg caactttgaa cgcgccggtg ttgcagcggt tcacatcgaa
    13861 gatcaggtag cgcaaaaacg ctgcggccac cgtccgaaca aagccattgt atctaaagat
    13921 gaaatggtcg accgtatcaa agctgccgta gatgcgcgcg ttgatgagaa cttcgtgatt
    13981 atggcgcgta ccgatgcgct ggcggtagaa ggtttggatg ccgctatcga acgcgcccaa
    14041 gcttgtgtcg aagccggtgc ggacatgatt ttccctgaag ccatgaccga tttgaacatg
    14101 taccgccaat ttgcagatgc ggtgaaagtg cccgtgttgg cgaacattac cgagtttggt
    14161 tccactccgc tttataccca aagcgagctg gctgaaaacg gcgtgtcgct ggtgctgtat
    14221 ccgctgtcat cgttccgtgc agcaagcaaa gccgctctga atgtttacga agcgattatg
    14281 cgcgatggca ctcaggcggc ggtggtggac agtatgcaaa cccgtgccga gctgtacgag
    14341 catctgaact atcatgcctt cgagcaaaaa ctggataaat tgtttcaaaa atgatttacc
    14401 gctttcagac ggccttccaa tctatccgca tcggccgtct gaaaattgaa aatccataaa
    14461 aaacaaagga gaaatacgat gactgaaact actcaaaccc cgactttcaa acctaaaaaa
    14521 tccgttgcgc tttccggcgt tgcggcgggt aatacagcat tgtgtaccgt cggccgtacc
    14581 ggcaacgatt tgagctatcg cggttacgac atcttggatt tggcacaaaa atgcgagttt
    14641 gaagaagtcg cccacctgct gattcacggt catttgccca acaaattcga gctggccgct
    14701 tataaagcca agctcaaatc catgcgcggc ctgcctatcc gtgtgattaa agttttggaa
    14761 agcctacctg cacataccca tccgatggat gtgatgcgta ccggcgtatc catgctgggc
    14821 tgcgttcatc ctgaacgtga aagccatccg gaaagcgaag cgcgcgacat cgccgacaaa
    14881 ctgatcgcca gcctcggcag catcctcttg tactggtatc aatattcgca caacggcaaa
    14941 cgcattgagg ttgaaagcga cgaagagacc atcggcggtc atttcctgca actgttgcac
    15001 ggcaaacgcc caagcgaatc ccacatcaaa gccatgcacg tttcactgat tctgtatgcc
    15061 gaacacgagt tcaacgcttc taccttcacc gcccgcgtga ttgccggtac aggctctgat
    15121 atgtactcca gcattaccgg agcaatcggc gcgttgaaag gtccgaaaca cggcggcgcg
    15181 aacgaagtgg cttacgatat tcaaaaacgc taccgcaatg ccgacgaagc cgaagccgac
    15241 atccgcgaac gcatcggccg caaagaaatc gtgatcggtt tcggtcatcc ggtgtacacc
    15301 atctccgacc ctcgcaacgt tgtcattaaa gaagtggcac gcggtttgag caaagaaacc
    15361 ggcgatatgc gcctctttga cattgccgaa cgtttggaaa gcgtgatgtg ggaagagaaa
    15421 aaaatgttcc cgaatctgga ctggttctcc gccgtttcct atcaaaaatt gggcgtaccg
    15481 accgctatgt tcacaccgct gttcgtgatt tctcgtacaa ccggttggag cgcacacgtt
    15541 ctcgagcaac gcaaagacgg caaaatcatc cgtccgagcg cgaactacac gggccctgaa
    15601 gatttggcgt ttgtggagat tgaagaccgc taatacgcgt aacagcaggg tgggccgcca
    15661 gcccgcccca tctcgaaatg ccgtttgaaa acaatgaata aatgatgttt tcgtttttcg
    15721 atggcctagt gcagtatgcg agagagagcc ggccgtttgg aaaacatgct gctctgctgt
    15781 cgtcattccc atacaggcag aaattcaaaa gttgaaatgt tctgctgtaa agagtgctga
    15841 aagatttaag tttggatttc cgtctatacg ggaatgatgg tagcggagca gcaatttttt
    15901 tcataccgcg aatagatttc agataacaag caataaaaca gaatttatgg tttcagacgg
    15961 cctgaaggtc cgaatcaaca ggccgtctga aaaaagaaat ttaatgaatt tattggcata
    16021 ctaattatta atgcggaaca tttgatggat aaggacaagg ggtcttatgc tggtattccc
    16081 gtacaaaata ccaaagagtt agtttggcag aaaatacaag aaatacctat ttctgaatgt
    16141 ggggaaccgt tggtcagtgt tggtaatacc ggacgcattc gtgtcaatcc tgtttatttt
    16201 tcccagggta ttgaaggtgc aataaatact gttttattgc gtagaagtgt tgctgatagg
    16261 ctgactcagg ttgtctcttt gctgccagaa atgtacggat tggaaatttt tgatggttgg
    16321 cgtcctgtca tagtgcaaag agcattacga gaaaatatga agcaagaaat tgaaaaacgc
    16381 catccggaat atgatgaagt tcaagttaga gaagcactgg actgttttgc tgctgatcca
    16441 gatcgggcag gaatgcctct gccccatttg acaggcggat ctgttgatgt cggattgttt
    16501 gatataaaaa gtggcaaaag tttggatatg ggaagtgagt ttgatgcaac cggacattta
    16561 tcttatagcg atgctttaga gaaagaaggt gagtatttct cctctgctcg taatttacgc
    16621 cggattttga ttcatgcgat gaaagaggca ggatttagta atttgccaac cgaatggtgg
    16681 catttcgatt atggcaacca aaattgggct tattttaccc aacaaagcaa cgcagttttt
    16741 ggggcggtag aagagcagga tacttaaatt aaaataaaaa ttgggaggaa aaatgcaaac
    16801 tttaatttca gcagataatc atttgctgct gtgggctttt gttatgttag ctgccgctgc
    16861 tgcgattttt attgagcaaa acagtcgctt ggctgggaaa gtccctggtg cagtattagc
    16921 tttattgatt gcgttgattg cttctaattt gggtgttatt ccgacggatg ctccagtatt
    16981 tgatgctgta tggtcttata ttgtacctct tgctattccg ttgttattgt ttcaattaga
    17041 tcttcatgct ctatttaagg aaagtggacg tatgctgttt attttcctga ttagttcact
    17101 agggacggtc attggaacgc ttgtctcatt tgcactattg aaaaactata ttcctgaact
    17161 agataaggta gctggcatga tttcagcatc ttatacggga ggtggtgtta attttgcagc
    17221 tatgtcagct aagcttaacc ctgctaaaga tgttattgca gcaacaattg ttgctgataa
    17281 tttgatgatg gcttgttact tttttatttt gattggtatc tcttcctcat attgggtcag
    17341 aaaagtttgg ggaagtccat atcaggataa attggagcag gaatatcatg atccgagtgt
    17401 gaataaggct gccgagtatt ggaaacctaa atccatttcg ctacagagta tagccttatc
    17461 tttggctgcc tcgattttgt tggtcgcagt ttcattctca ttatccagtt ttttgcaaaa
    17521 tcattttcaa agtgttgatg gtgttgcatt aaaaatgctg acaggtttaa ttagtgacaa
    17581 atatttgctg ttaacgacat ttacattggc agttgtttta tttttccgta aaggcattca
    17641 aaaactagat ggcagtcaag aattagggac atattgtatt tatctgtttt ttgttgtgat
    17701 tggtgttcct gcctctatac cgttaattat taaaacagca ccattactct ttgtttttac
    17761 tttgattatt gcggtattga atttgttact gacgttagtg ttaggcaagc tgttcaaatt
    17821 cagtattgaa gaaattgtat tggcttgtaa tgccaatatt ggagggccga ctactgcagc
    17881 agccttagcc atcagtaaag gttggcgtga tttagtcggt gcaattttgt taattggtac
    17941 tgtaggctac attatcggta actatatagg ttcgtttgta tatgccctat tgagctgaag
    18001 actaatctaa caatccatga accttttcag acgaccccct tcaaaaaacg tcgtctgaaa
    18061 ccccaaacca caagaaaaat agatccacag gagaactgaa catggctgcc aaccaacgtt
    18121 accgcaaacc gctacccggt acggatttgg aatactacga cgcgcgtgcg gcgtgtgagg
    18181 acatcaaacc cggctcttac gacaagctgc cttatacaag ccgtatcttg gctgagaact
    18241 tggtcaaccg cgcagacaaa gtcgacctgc cgacgctgca aagctggctg ggccagttga
    18301 tagaagggaa gcaggaaatc gactttccgt ggtatcccgc gcgggtggtg tgccacgata
    18361 ttctggggca gaccgcgctg gtggatttgg cgggcttgcg cgatgcgatt gccgaaaaag
    18421 gcggcgatcc tgccaaagtg aatccggtgg tgcaaaccca gcttatcgtc gaccactctc
    18481 tggcggtgga gtgcggcggt tacgatcctg atgccttccg caaaaaccgc gaaatcgaag
    18541 accggcgcaa cgaagaccgt ttccacttca tcaactggac aaaaaccgca tttgaaaatg
    18601 tggacgtgat tccggcgggc aacggcatta tgcaccaaat caatctggaa aaaatgtcgc
    18661 ccgtcgtcca agtcaaaaac ggcgtggctt tccccgatac ctgcgtcggc acggattcgc
    18721 acacgccaca cgtcgatgcg ctgggcgtga tttccgtagg cgtgggcggt ttggaagccg
    18781 aaaccgtaat gttaggccgt gcatccatga tgcgtctgcc tgatattgtc ggcgttgagt
    18841 tgactggcaa acgtcaacct ggcattactg ccaccgacat cgtgttggca ctgaccgaat
    18901 tcttgcgtaa agagcgcgtg gttggcgcat ttgtcgaatt cttcggcgag ggcgcaagaa
    18961 gcctgtctat cggcgaccga gccactattt ccaacatgac ccctgagttc ggcgcgactg
    19021 ccgcgatgtt cgctattgat gagcaaacca ttgattattt gaaactgaca ggccgcgacg
    19081 acgcgcaagt gaaattggtg gaaacctacg ccaaaaccgc aggcttgtgg gcagatgcct
    19141 tgaaaaccgc cgtttatcct cgcgtattga aatttgattt aagcagcgta acgcgcaaca
    19201 tggcaggccc aagtaacccg catgcccgtt ttgcgactgc cgatttggcc ggcaaaggct
    19261 tggctaaacc ttatgaagag ccttcagacg gccaaatgcc tgacggtgca gtgattattg
    19321 ccgcgattac ttcctgtacc aatacttcca atccgcgcaa cgttgtcgcc gccgcgctgt
    19381 tggcacgcaa tgccaaccgc ctcggcttgc aacgtaaacc ttgggtgaaa tcttcgtttg
    19441 ccccgggttc aaaagtagcc gaaatctatt tgaaagaagc aggcctactg cctgaaatgg
    19501 aaaaactcgg cttcggtatc gttgccttcg catgtaccac ctgtaacggc atgagcggtg
    19561 cgctggatcc gaaaatccaa aaagaaatca tcgaccgcga tttgtacgcc accgccgtat
    19621 tatcaggcaa ccgcaacttc gacggccgta tccacccgta tgcgaaacag gctttcctcg
    19681 cttcgcctcc gttggtcgtt gcctacgcgc tggcaggcag tatccgtttc gatattgaaa
    19741 acgacgtact cggcgttgca gacggcaagg aaatccgcct gaaagacatt tggcctgccg
    19801 atgaagaaat cgatgccgtc gttgccgaat atgtgaaacc gcagcagttc cgcgatgtgt
    19861 atgtaccgat gttcgacacc ggcacagcgc aaaaagcacc cagtccgctg tacgattggc
    19921 gtccgatgtc cacctacatc cgccgtccgc cttactggga aggcgcgctg gcaggggaac
    19981 gcacattaag aggtatgcgt ccgctggcga ttttgcccga caacatcacc accgaccacc
    20041 tctcgccgtc caatgcgatt ttggccgtca gtgccgcagg cgagtatttg gcgaaaatgg
    20101 gtttgcctga agaagacttc aactcttacg caacccaccg cggcgaccac ttgaccgccc
    20161 aacgcgctac cttcgccaat ccgaaactgt ttaacgaaat ggtgaaaaac gaagacggca
    20221 gcgtgcgcca aggctcgttc gctcgcgtcg aacccgaagg cgaaaccatg cgcatgtggg
    20281 aagccatcga aacctatatg aaccgcaaac agccgctcat catcattgcc ggtgcggact
    20341 acggtcaagg ctcaagccgc gactgggctg caaaaggcgt acgcctcgcc ggcgtggaag
    20401 cgattgttgc cgaaggcttc gagcgtatcc accgcaccaa cttgatcggt atgggcgtgt
    20461 tgccgttgca gttcaaaccg ggtaccaacc gccataccct gcaactggac ggtacggaaa
    20521 cctacgacgt ggtcggcgaa cgtacaccgc gctgcgacct gaccctcgtg attcaccgta
    20581 aaaacggcga aaccgttgaa gttcccgtta cctgccgcct cgataccgca gaggaagtgc
    20641 tggtgtacga agccggcggc gtgctgcaac ggtttgcaca agacttttta gaaggtgtgg
    20701 tagcataaag gtagacggtc ttttttatga tttatgagaa gaccgtttga aaattattta
    20761 tggttaaatt tttaatttaa attaaacagt aaatatgaag acacaagaag atgaggtaac
    20821 taagcagaaa atttttaatc atatgattaa taataaatca tttttaaatt tccagttttg
    20881 gacatttgct gctttgagtg caggttcatt tgcctttcta ataagtgcag caaatataga
    20941 ttctaaagat agagacttga cgcttgaaat agccattgtt ggatattcag taagtttaat
    21001 attaaattcc atactatgtt ttttaataag aggcatagaa gacgatgagt tatcggttaa
    21061 aatgttaaat gaatttaatt tggataagcg tactttttgg attcccattc tagcaacgtg
    21121 gagttttgcg ctttcgacac ttttcttatt gtttaccatt agtctagtag gagcaattac
    21181 tgctcttata atggctgttt tagcaataat tagttttata aaatttacaa aaaaatcata
    21241 gatttttaca atttgaagtg gtgcgtaaat cgggcattga tgcccgacac agaagttgta
    21301 ggttgagtta agccccggca ttttgctaaa tccaacggtt ttttcgggtt tgcaacccaa
    21361 cctacctctg ctgctaatct gcatcataca aaggagaact cgaaatgccg caaattaaaa
    21421 tccccgccgt ttactaccgc ggcggtacat ctaaaggcat tttcttcaaa cgcaccgacc
    21481 tgcccgaagc ggcgcaacaa gcaggcgagg cacgcgacaa aatcctgttg cgcgtactcg
    21541 gcagcccgga tccctacggc aagcagatag acggtttggg caacgccagt tcgtccacca
    21601 gcaaagccgt gattttggac aagtccgaac gcgccgatca cgatgtcgat taccttttcg
    21661 ggcaagtttc catcgacaaa ccttttgtcg attggagcgg caactgcggc aacctcaccg
    21721 ctgccgtggg cgcattctcc atcgaacagg gcttggtcga taaaggcaag attccttcag
    21781 acggcatctg cacggtcaaa atctggcaga aaaacatcgg caaaaccatt attgcccatg
    21841 taccgatgca aaacggcgca gttttggaaa caggcgattt tgagctcgac ggcgtaacgt
    21901 tcccggcagc cgaagtacaa atcgaatttc ttgatccagc cgacggcgaa ggcagtatgt
    21961 tcccaaccgg caatttggtc gatgaaattg atgtgccgaa tataggccgt ttgaaagcca
    22021 cgctcatcaa cgcgggcatt ccgaccgttt tcttgaatgc cgccgacttg ggctacacag
    22081 gcaaagagtt gcaagacgac atcaacaacg atgccgcggc tttggaaaaa ttcgagaaaa
    22141 tccgcgctta cggtgcgctg aaaatgggtc tgatcagcga cgtatccgaa gctgccgctc
    22201 gcgcgcacac gccgaaagtc gccttcgtcg cgcccgccgc cgattacacc gcctccagtg
    22261 gcaaaaccgt gaacgccgcc gacatcgatt tgctggtacg cgccctgagc atgggcaaac
    22321 tgcaccacgc gatgatgggt accgcctctg ttgccattgc gaccgccgcc gccgtacccg
    22381 gtacgctggt caaccttgcc gcaggcggcg gaacgcgtaa agaagtgcgc ttcgggcatc
    22441 cttccggcac attgcgcgtc ggtgcagccg ccgaatgtca ggacggacaa tggacggcca
    22501 ccaaagcggt catgagccgt agcgcacgcg tgatgatgga aggttgggtc agggtgcctg
    22561 aggattgttt ttaaattgac gtagcatggg tttgcccgcg agccataaaa aggtcgtctg
    22621 aaaaacaagt aaacatcaaa tcactgacca ttcctttccc ttgccctgtg gcggaaggcg
    22681 gcaaatcaca aggaagaaca cggaaacccc gataaaagac agcttcccgt attaccgtca
    22741 ttcccgcgca ggcgggaatc cagacctgtc aatatggagg attggcaggg gaaaacaggt
    22801 ttcgtgagtt ctacattctg gattcccgcc acagcctgtc ctcgcgtagg cggggacgga
    22861 ataacgatag aaaatgcggc atatgctttg cccaaagagg ccgtctgaaa cacactccgc
    22921 ccaacgccca tcctttttca gacgacccca caccaaaaaa caaccacaaa ctacaaggag
    22981 aaacatcatg tccgaccaac tcattcttgt tctgaactgc ggcagttcat cgctcaaagg
    23041 tgccgttatc gaccgcaaaa gcggcagcgt cgtcctaagc tgcctcggcg aacgcctgac
    23101 cacgcccgaa gccgtcatta cgttcagcaa agacggcaac aaacgccaag ttcccctgag
    23161 cggccgcaac tgccatgccg gcgcggtggg tatgctgctg aacgaactgg aaaaacacgg
    23221 actgcacgac cgcatcaaag ccgtcggcca ccgcatcgcc cacggcggcg aaaaatacag
    23281 cgagtctgtt ttgatcgacc aggccgtaat ggacgaactc aatgcctgca ttccgcttgc
    23341 gccgctgcac aaccccgcca acatcagcgg catccttgcc gcacaggaac atttccccgg
    23401 tctgcccaat gtcggcgtga tggatacttc gttccaccaa accatgccgg agcgtgccta
    23461 cacttatgcc gtgccgcgcg agttgcgtaa aaaatacgct ttccgccgct acggtttcca
    23521 cggcaccagt atgcgttacg ttgcccctga agccgcacgc atcttgggca aacctctgga
    23581 agacatccgc atgattattg cccacttagg caacggcgca tccattaccg ccatcaaaaa
    23641 cggcaaatcc gtcgatacca gtatgggttt cacgccgatc gaaggtttgg taatgggtac
    23701 acgttgcggc gacatcgatc cgggcgtata cagctatctg acttcccacg ccgggatgga
    23761 tgttgcccaa gtggatgaaa tgctgaacaa aaaatcaggt ttgctcggta tttccgaact
    23821 ttccaacgac tgccgcaccc tcgaaatcgc cgccgacgaa ggccacgaag gcgcgcgcct
    23881 cgccctcgaa gtcatgacct accgcctcgc caaatacatc gcttcgatgg ctgtgggctg
    23941 cggcggcgtt gacgcactcg tgttcaccgg cggtatcggc gaaaactcgc gtaatatccg
    24001 tgccaaaacc gtttcctatc ttgatttctt gggtctgcac atcgacacca aagccaatat
    24061 ggaaaaacgc tacggcaatt cgggcattat cagcccgacc gattcttctc cggctgtttt
    24121 ggttgtcccg accaatgaag aactgatgat tgcctgcgac actgccgaac ttgccggcat
    24181 cttgtagcca aaaaagggac gagtccgcaa aaatgccgtc tgaaattttc agacggcatt
    24241 ttgtttggat tttgggcgta caatacggaa aacatgacga taaggacaca aactatggca
    24301 cagtttttcg ccgttcatcc cgacaacccc caagaacgcc tcatcaagca ggcggtcgaa
    24361 atcgtcaata aaggcggcgt ggtcgtttat ccgaccgatt cctgttatgc cttgggctgc
    24421 aaactcggcg ataaggcggc gatggaacgc atactctcca tccgcaaaat cgatttgaaa
    24481 caccacctga ccctgatgtg cgcagatttg agcgagttgg gcacatacgc caaagtcgac
    24541 aacgtacagt ttcgtcagct taaagccgcc acacccgggc cttatacttt tattttacag
    24601 gcgacgaagg atgtgccggc gcgcacgctg cacccgaaac gcaaaaccat cgggctgcgt
    24661 attcccgata atgccattgc acaagccctg ctgggggaat tgggcgagcc gcttttaagc
    24721 tgcaccctga tgctgcccga agacggcgaa ccattgaccg atccttatga aatccgcgag
    24781 cgtttggaac acgccgtcga tttggtgatt gacggcggct ggtgcggaac cgagccgacc
    24841 accgtcgtcg atatgaccga cggcacggaa ttggtgcgcc aaggttgcgg cgatacggcg
    24901 gtgttcggtt tgtagggaaa ccgatgccgt ctgaagcatc ggctgttcag acggcattgc
    24961 gcgccttgcc ggcggcagtc cgaaatgccg gcgcgtatcg cgctcggtcg gaatatccgt
    25021 ttgaaacggc attttgatgc attactgcac cgcaatcgga attctcggtt cgtagagcag
    25081 gtcgtaggtc ggcttgttga gcaggtcttg gagcgtgaaa ccgtccagat acgtgaaaaa
    25141 cgacttcatc gcgccgccga gtatgcccgt cagccggcag gacggtgtaa tcaggcattc
    25201 gttgttctcg cccatgcact cgaccagctg catcggttcg aggtggcgga caaccgagcc
    25261 gatgttgatg cggtcgggcg gtgcggcaag ccgcagaccg ccgccttttc cgcgcacact
    25321 gtggaggaag ccgcctttga ccagcgcggt aacgaccttc atcagatggc ttttggaaat
    25381 gccgtaggtt acggcgatgg tactgatgtt gaccagcgca tcgtcgttga tggcagtgta
    25441 gataaggacg cgcagcccgt agtccgtatg ttgtgtcaaa tacatgattt tctcggtatg
    25501 gattgttatt cttatcggta cggtttaagg ttcacggaca ataccttaat ggttgaaacc
    25561 ctgtccgtcg gggcggtaga atgcagcctg tctgcggcgg tatgccgtct gaaacatccg
    25621 cgctaccgtt tgagaatttg ttattgtaac tcaaaatcat gaaaccgttg aaacgacatc
    25681 ccgcccttat cgggctttcg cgtgaccacc accattcgct ttccctgtgc gtgcgtctgt
    25741 tgcggacgcc ggaagaaagg catcgggacg aactcgaacc gcatttttcc gaattggaaa
    25801 cccattttcg cgaagaagaa gccaagtttg ccccaatttg gcagaatgtc gcccccgaat
    25861 tgaaacaacg tttcgagaaa gaccacgccc gactgcggca gatgatggca agccccgaat
    25921 acggtaacgc ggcgtggaat accgcttttg ccacaaccct gcgcgaccac gcgcgctttg
    25981 aagaacgcga gctgtttccc gccgccgaac cgtttttgcc ggcatgattc cgttttgcgg
    26041 caaatatatt aatgataaac aaggaacaca catgaaattt accaagcacc ccgtctgggc
    26101 aatggcgttc cgcccatttt attcgctggc ggctctgtac ggcgcattgt ccgtattgct
    26161 gtggggtttc ggctacacgg gaacgcatga gctgtccggt ttctattggc acgcgcatga
    26221 gatgatttgg ggttatgccg gactggtcgt cgtcgccttc ctgctgaccg ccgtcgccac
    26281 ttggacgggg cagccgccca cgcggggcgg cgttctggtc ggcttgacta tcttttggct
    26341 ggctgcgcgg attgccgcct ttatcccggg ttggggtgcg tcggcaagcg gcatactcgg
    26401 tacgctgttt ttctggtacg gcgcggtgtg catggctttg cccgttatcc gttcacagaa
    26461 tcaacgcaac tatgttgccg tgttcgcgct gttcgtcttg ggcggcacgc acgcggcgtt
    26521 ccacgtccag ctgcacaacg gcaacctagg cggactcttg agcggattgc agtcgggctt
    26581 ggtgatggtg tcgggtttta tcggtctgat tggtacgcgg attatttcgt tttttacgtc
    26641 caaacggttg aatgtgccgc agattcccag tccgaaatgg gtggcgcagg cttcgctgtg
    26701 gctgcccatg ctgaccgcca tgctgatggc gcacggcgtg atgccttggc tgtcggcggc
    26761 tttcgcgttt gcggcaggtg tgatttttac cgtgcaggtg taccgctggt ggtataaacc
    26821 cgtgttgaaa gagccgatgc tgtggattct gtttgccggc tatctgttta ccggattggg
    26881 gctgattgcg gtcggcgcgt cttatttcaa acccgctttc ctcaatctgg gtgtgcatct
    26941 gatcggggtc ggcggtatcg gcgtgctgac tttgggcatg atggcgcgta ccgcgctcgg
    27001 tcatacgggc aatccgattt atccgccgcc caaagccgtt cccgttgcgt tttggctgat
    27061 gatggcggca accgccgtcc gtatggttgc cgtattttct tccggcactg cctacacgca
    27121 cagcatacgc acctcttcgg ttttgtttgc actcgcgctt ttggtgtatg cgtggaagta
    27181 tattccttgg ctgattcgtc cgcgttcgga cggcaggccc ggttgagaca aaccgccgca
    27241 gatttcgggt ctgggcggtt tgcttttcag acggcagggc ggtcagttgc cgtccagcca
    27301 gcggtcgcgt gtggttttgg cttcttcaaa atagcggtac agggcttcgc ggtcgtcggt
    27361 ggtcaggatg tttgccaaaa cgtccaactg tttgcccaag ccttgaacca gttgcagcag
    27421 gctgtctttg ttggcaaggc agatgtccgc ccacacggcg ggatgaccgg aggcgatgcg
    27481 ggtgaagtcc cgaaagcccg tggcggcgaa tttcagatat tcctgtccgt cggggtggtc
    27541 gagaatctgg tggacatagg cgaaggcggt caggtggggc atatgggaga cggcagcgaa
    27601 aaccgcgtcg tggcgttgcg cgtccatcgt ataaatttcc gcaccgaccg cgtgccacag
    27661 ttcttctacc aaggcaatgc cgtctgaatg ttcgccgccg tgtggcgtga tgatgagttt
    27721 tctgtggcgg aacagcccga actgcgcggc ttgcgcaccg cttctgtccg aaccggcaat
    27781 cgggtgggcg gcgatgcagc ggtgcaggcg gtcgggcaga cagcggcgga aggcttcgat
    27841 gaccgaagat ttggtgctgc cgacatcgga aatccaagtg tgttccggca aaacggggcg
    27901 cagcgcggtc aaaatggcgg gaaaggtggc gacgggcgtg gcaatcagta ccaagtccgc
    27961 accgccgatg ctgtccgcgt cgatggcaac ggaggcacgg tcaatcacgc cgcgttccaa
    28021 tgcacgttcg aggttgtcgc ggtcggtgtc gataccggta acggtgcgga cgagtccctg
    28081 ccttttgagg tcgagaacga acgaaccgcc gatcagccct acaccgatga gggcaatatg
    28141 gttcaaaatg ggcatttgtg taaacggttt tcgcaaagta ccgtcatggt agcctatcgg
    28201 cggaatatgc cgcaaggtcg gcaggaaaaa ggagaagaaa tggacaaaat cagagttgcc
    28261 gccgtgcaga tggtgtcggg cgtgtcgccg gaaaccaacg tcgctgccat gaaacgcctg
    28321 gtcgcacggg cggcggagca gggtgtggat tgggtgctgc tgcccgaata ttgggtgctg
    28381 atgggcgcaa acgataccga caaactcgcg cttgccgagc ctttgggcgg cggacgcttt
    28441 cagacggcat tgagcgaaac ggcgaaagaa tgcggcgtgg tgctgtttgg cggaaccgtg
    28501 ccgctgcaaa gccccgaggc gggcaaggtc atgaatactt tattggtgta cgggcgcgac
    28561 ggcaaacgga cggggctgta ccacaaaatg cacctcttcg gcttttccgg tttgggcgaa
    28621 cgctatgccg aagccgatac catccgcgcg ggcggggaag tgccgcactt gtcggcagag
    28681 ggcgtgccgg tggcagcagg tatttgttac gatgtccgct ttcccgaatt tttccgccgc
    28741 cagctgccgt ttgacgtatt gatgctgccc gctgcgttta cgcacacgac gggcaaggcg
    28801 cattgggagc tgctgctgcg cgcgcgtgcc gtcgaaaacc aatgttacgt cgtggcggcg
    28861 gcacagggcg gtttgcacga aaacggacgg cgcacgttcg gacacagcat gattgtcgat
    28921 ccgtggggcg acgtattgga cgtattaccc gaaggcgaag gcatcgttac ggcagacatc
    28981 gatgccaacc gcctgaacag cgtccgcaac cgcctgcccg ccttgaaata ccgggttttg
    29041 gatgccgtct gaaggttcag acggcatcgg tgccggggaa tcagcgggct gtaggatggg
    29101 cttcagcctg ccatttccat caatcccaca tttctaccgt tttcatcgaa tccatcgaat
    29161 ccgccccttt cgacgaccca gtcctacgca actgaaccgt cattcccacg gaagtgggaa
    29221 tctagaatct cgggggtttc agtcatttcc gatagattcc cgccgcgtct ggggtctgga
    29281 ttcccgcctg cgcgggaatg acgaatttcg agattacggt gttgtcggga atgacggatc
    29341 catccatacg gaacctgcac cacgtcattc ccacggaagt gggaatctag aatctcgagg
    29401 gtttcagtca tttccgatag attcccgccg cgtcaggggg tctggattcc cgcctgcgcg
    29461 ggaatgacgg atccatccat acgg
//
LOCUS       DAWITQ010000008        27426 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.008, whole genome shotgun sequence.
ACCESSION   DAWITQ010000008 DAWITQ010000000
VERSION     DAWITQ010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 27426)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27426)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27426
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.008"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..808
                     /locus_tag="WIX18_000322"
     CDS             <1..808
                     /locus_tag="WIX18_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ5237484.1"
                     /translation="RYRTPNIKYIYQDNQGTAEARNTGIKNSNGKYIVFIDSDDFINC
                     QVLLDFLSKDDIDMPDVVFLNAVKYDKGSVSHFGEDYQPEKILKQSKVEVLKGLCRFR
                     KFPGSACNKIIKRELIIKEKLFFEKEVYAEDIEWSMRLFNAATTFSYLDGCYYYYRQG
                     RKDSKTGTVSEKSIKSLLYILEKNAEMEFDRDISSYLYSFLSYEYLVLLFIMTSKNIE
                     CDADIKRRAYHLRFMLLKSNKLIYKLIFPIITLFGVDITGRILKAIRGNI"
     gene            849..1379
                     /locus_tag="WIX18_000323"
     CDS             849..1379
                     /locus_tag="WIX18_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HEZ5237485.1"
                     /translation="MNAIRTFQNRTPEIHESCMIDEACVVIGEVSLAEDVSVWPCAVL
                     RGDVNSITVGARSNIQDGSVLHVSHKTAAKPEGSPLVIGEDVTVGHKVMLHGCRIGNR
                     VLVGMGTTVLDDAVIEDEVMIGAGSLVPPRKRLEGGYLYVGSPVRQVRVLTDEEKAFL
                     KYSAAHYVKLSKQYGM"
     gene            complement(1413..1529)
                     /locus_tag="WIX18_000324"
     CDS             complement(1413..1529)
                     /locus_tag="WIX18_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor domain protein"
                     /protein_id="HEZ5237486.1"
                     /translation="MPSEPEKRLSDGIFACNSNADGQNQGASDTVIGCVPSA"
     gene            complement(1744..3339)
                     /locus_tag="WIX18_000325"
     CDS             complement(1744..3339)
                     /locus_tag="WIX18_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HEZ5237487.1"
                     /translation="MSQEILDQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQSAGT
                     VKGKKTGKFATSDWMDIEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVL
                     TAVDSALMVIDAAKGVEAQTIKLLNVCRLRNTPIVTFMNKYDREVRDSLELLDEVENI
                     LQIRCAPVTWPIGMGKNFKGVYHILNDEIYLFEAGGERLPHEFDIIKGIDNPELEQRF
                     PLEIQQLRDEIELVQAASNEFNLDEFLAGELTPVFFGSAINNFGIQEILNSLIDWAPA
                     PKPRDATVRMVKPDEPKFSGFIFKIQANMDPKHRDRIAFLRVCSGKFERGMKMKHLRI
                     NREIAASSVVTFMSHDRELVEEAYAGDIIGIPNHGNIQIGDSFSEGEQLAFTGIPFFA
                     PELFRSVRIKNPLKIKQLQKGLQQLGEEGAVQVFKPMSGADLILGAVGVLQFEVVTSR
                     LANEYGVEAVFDSASIWSARWVSCDDKKKLAEFEKANAGNLAIDAGGNLAYLAPNRVN
                     LGLTQERWPDIVFHETREHSVKL"
     gene            complement(3446..3841)
                     /gene="hisI"
                     /locus_tag="WIX18_000326"
     CDS             complement(3446..3841)
                     /gene="hisI"
                     /locus_tag="WIX18_000326"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HEZ5237488.1"
                     /translation="MDKNLLEAVKFDEKGLVCAIAQDAETKRVLMVAWMNAEALQKTV
                     ETGFAHYYSRSRQKQWMKGEESGHTQKVRELRLDCDGDAIVMLIAQNGGIACHTGRES
                     CFYKVWRGGAWETADAVLKDEKEIYGSTH"
     gene            complement(3872..4639)
                     /gene="hisF"
                     /locus_tag="WIX18_000327"
     CDS             complement(3872..4639)
                     /gene="hisF"
                     /locus_tag="WIX18_000327"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HEZ5237489.1"
                     /translation="MALAKRIIPCLDVKDGRVVKGVNFIGLRDAGDPVEAAKRYNGEG
                     ADELTFLDITASSDNRDTILHIIEEVAGQVFIPLTVGGGVRTVADIRRLLNAGADKVS
                     INTAAVTRPDLIDEAAGFFGSQAIVAAVDAKAVNPENTRWEIFTHGGRNPTGLDAVEW
                     AVEMQKRGAGEILLTGMDRDGTKQGFNLPLTRAVAEAVDIPVIASGGVGNVRHLIEGI
                     TEGKADAVLAAGVFHFGEIAIREAKRAMREAGIEVRL"
     gene            complement(4652..5389)
                     /gene="hisA"
                     /locus_tag="WIX18_000328"
     CDS             complement(4652..5389)
                     /gene="hisA"
                     /locus_tag="WIX18_000328"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HEZ5237490.1"
                     /translation="MLLIPAIDLKEGRCVRLRQGLMEEATVFSDSPAETALHWFKQGA
                     RRLHLVDLNGAFAGVPQNLPAIKDILAAVAKDIPVQLGGGIRDLKTIGQYLDLGLNDV
                     IIGTAAVKNPDFVREACKAFPGRIIVGLDAKDGMAAIDGWATVTGHHVIDLAKRFEDD
                     GVNSIIYTDIGRDGMMSGVNIDATVKLAQTVRIPVIASGGLTGLDDIRALCAAEKHGV
                     AGAITGRAIYEGSIDFAQAQQLADSLD"
     gene            complement(5422..6060)
                     /gene="hisH"
                     /locus_tag="WIX18_000329"
     CDS             complement(5422..6060)
                     /gene="hisH"
                     /locus_tag="WIX18_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEZ5237491.1"
                     /translation="MQTAIIDYGMGNLHSVLKSVRTAGQLAGKNTEIFLSGDPDRVSR
                     ADKVIFPGQGAMPDCMAALKRGGLDEAVKDALKNKPFFGICVGAQLLFDHSEEGNTDG
                     LGWFGGKVRRFERDLRDRQGCRLKVPHMGWNTVRQTQNHPLFKDIPQNTRFYFVHSYY
                     FDPENPETILGESDYPSPFACIVGKDNVFATQFHTEKSHDAGLTMLKNFLNW"
     gene            complement(6191..7693)
                     /gene="pta"
                     /locus_tag="WIX18_000330"
     CDS             complement(6191..7693)
                     /gene="pta"
                     /locus_tag="WIX18_000330"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HEZ5237492.1"
                     /translation="MAKVLIVPVSAGLDASAAAQAFAKALDAQIFQAVDATAETLLAQ
                     GKSDDWFDALVGKVAALDAANLVIEGIAPDADKIYLAGKNVELALSLDAAAVFAVRSD
                     NADADELANRLNLAKQFFAAAPGVLEGFVVDGAAASVAEAAAEKTGLTFFGSSDALKD
                     VSVLAGREAKRLSPAQFRYNLIDFARQADKRIVLPEGAEPRTVQAAAICHEKGIARCV
                     LLAKREEVEAVAKERGISLPDSLEIIDPASLVEQYVEPMCELRKSKGLTPEDARKQLQ
                     DTVVLGTMMMAQNDVDGLVSGAVHTTANTIRPALQLIKTAPGASLVSSVFFMLLPNQV
                     LVFGDCAVNPNPTAQQLADIAIQSADSAKAFGIDPKVAMISYSTVNSGSGPDVDTVIE
                     ATKLAREKRPDLAIDGPLQYDAATVPGVGKSKAPGSPVAGQATVLVFPDLNTGNCTYK
                     AVQRNANVLSVGPLLQGLRKPVNDLSRGALVEDIVFTIALTAVQAKQMEG"
     gene            complement(7878..8936)
                     /gene="fbpC"
                     /locus_tag="WIX18_000331"
     CDS             complement(7878..8936)
                     /gene="fbpC"
                     /locus_tag="WIX18_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter ATP-binding protein FbpC"
                     /protein_id="HEZ5237493.1"
                     /translation="MTAALHIGHLSKSFQNTPVLNDISLSLDPGEILFIVGASGCGKT
                     TLLRCLAGFEQPDFGEISLSGRTIFSKNTNLPVRERRLGYVVQEGVLFPHLTVYRNTA
                     YGLGNGKGKTAQERQRIEAMLELTGISELAGRYPHELSGGQQQRVALARALAPDPELI
                     LLDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHDREEALQYADRIAVMKQGRIL
                     QTASPHELYRQPADLDAALFIGEGIVFPAALNADGTADCGLGRLPVQSGAPAGTRGTL
                     LIRPEQFSLHPHSAPTASIHAVVLKTTPKARHTEISLRVGQTVLTLNLPSAPTLSDGI
                     SAVLHLDGPALFFPGNTL"
     gene            complement(8957..10474)
                     /gene="fbpB"
                     /locus_tag="WIX18_000332"
     CDS             complement(8957..10474)
                     /gene="fbpB"
                     /locus_tag="WIX18_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease FbpB"
                     /protein_id="HEZ5237494.1"
                     /translation="MSPKKIPIWLTGLILLIALPLTLPFLYVAMRSWQVGINRAVELL
                     FRPRMWDLLSNTLTMMAGVTLISIVLGIACALLFQRYRFFGKTFFQTAITLPLCIPAF
                     VSCFTWISLTFRVEGFWGTVMIMSLSSFPLAYLPVEAALKRISLSYEEVSLSLGKSRL
                     QTFFSAILPQLKPAIGSSVLLIALHMLVEFGAVSILNYPTFTTAIFQEYEMSYNNNTA
                     ALLSAVLMAVCGIVVFGESIFRGKAKIYHSGKGVARPYPVKTLKLPGQIGAIVFLSSL
                     LTLGIIIPFGVLIHWMMVGTSGTFALVSVFDAFIRSLSVSALGAILTILCALPLVWAS
                     VRYRNFLTVWIDRLPFLLHAVPGLVIALSLVYFSINYTPAVYQTFIVVILAYFMLYLP
                     MAQTTLRTSLEQLPKGMEQVGATLGRGHFFIFRTLVLPSILPGITAAFALVFLKLMKE
                     LTATLLLTTDDVHTLSTAVWEYTSDAQYAAATPYALMLVLFSGIPVFLLKKYAFK"
     gene            complement(10542..11537)
                     /gene="fbpA"
                     /locus_tag="WIX18_000333"
     CDS             complement(10542..11537)
                     /gene="fbpA"
                     /locus_tag="WIX18_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter substrate-binding protein
                     FbpA"
                     /protein_id="HEZ5237495.1"
                     /translation="MKTSIRYALLAAALTAATPALADITVYNGQHKEAAQAVADAFTR
                     ATGIKVKLNSAKGDQLAGQIKEEGSRSPADVFYSEQIPALATLSAANLLEPLPASTIN
                     ETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKDLEKSVLNYATPKWKNRIGYAPT
                     SGAFLEQVVAIVKLKGEAAALKWLKGLKEYGKPYAKNSVALQAVENGEIDAALINNYY
                     WHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGAAVLKSSQNKDEAKKFVAFLASKEG
                     QRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVSEKEHATRLLEQAGMK"
     gene            complement(11788..12258)
                     /locus_tag="WIX18_000334"
     CDS             complement(11788..12258)
                     /locus_tag="WIX18_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4375 domain-containing protein"
                     /protein_id="HEZ5237496.1"
                     /translation="MTDTDTQADRFEQMMWQAVDKLFEQHDGKLESMDGREQELVLIW
                     RTEADIGNGGILQFVCNWGFPAAEKTCSVLKKIGAIHSAMLIHRAADALRKEIRHLQS
                     EGKNLKEMWDITKHLDNKTASLPNSLDEQYWQDPDKLYLPGWQYYSGNPVQTLF"
     gene            complement(12315..13691)
                     /gene="argH"
                     /locus_tag="WIX18_000335"
     CDS             complement(12315..13691)
                     /gene="argH"
                     /locus_tag="WIX18_000335"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEZ5237497.1"
                     /translation="MHDKTWSGRFNEPVSELVKQYTASIGFDRRLAEWDIQGSLAHAQ
                     MLKETGVLDEGDLADIRRGMAEILEEIRSGKIEWSSDLEDVHMNIERRLTDKIGDAGK
                     RLHTGRSRNDQVATDIRLWLRDQITVIQSLIQNLQTALLDLAEQNAETVMPGFTHLQV
                     AQPVSFGHHMLAYVEMLGRDNERMADCRRRVNRMPLGAAALAGTTYPIQREITAELLG
                     FEQICQNSLDAVSDRDFAVEFTAAASLVMVHLSRLSEELILWMSPRFGFIDIADRFCT
                     GSSIMPQKKNPDVPELVRGKSGRVIGHLIGLITLMKSQPLAYNKDNQEDKEPLFDTAD
                     TLIDTLRIYADMMRGVTVKPDNMRAAVMQGFATATDLADYLVKKGMPFRDAHEVVAQA
                     VRHADEAGVDLSELPLEVLQGFSDLIADDVYGVLTPEGSLNARNHLGGTAPEQVRFQV
                     KRWREMLA"
     gene            complement(13710..14579)
                     /gene="galU"
                     /locus_tag="WIX18_000336"
     CDS             complement(13710..14579)
                     /gene="galU"
                     /locus_tag="WIX18_000336"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HEZ5237498.1"
                     /translation="MKPIKKAVFPVAGMGTRFLPATKASPKEMLPIVDKPLIQYAVEE
                     AVEAGCTEMVFVTGRNKRSIEDHFDKAYELETELEMRHKDKLLEHVRNILPPNITCLY
                     IRQAEALGLGHAVLCARAAIGDEPFAVILADDLIDAPKGALKQMVEVYGRSGNSILGV
                     ETVEASQTGSYGIVETEQLKQFQRIIGIVEKPKPEDAPSNLAVVGRYILTPRIFDLLT
                     GLPRGAGNEIQLTDGIAKLLDHEFVLAHPFEGTRYDCGSKLGYLEATVAYGLKHPETG
                     EPFRRLLEKYRTE"
     gene            complement(14607..15206)
                     /gene="rdgB"
                     /locus_tag="WIX18_000337"
     CDS             complement(14607..15206)
                     /gene="rdgB"
                     /locus_tag="WIX18_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HEZ5237499.1"
                     /translation="MSEKPEKIVLASGNAGKLEEFGNLFKPYSITVLPQSAFGIPECP
                     EPYPTFVENALAKARHAAEYSGLPALADDSGICAAALNGAPGIHSARYAGDNPKSDTA
                     NNLKLAAELAGKTDKSCCYVCVLVFVRHKDDPRPIIAEGVWHGQWNGVPAGENGFGYD
                     PYFYLPGHGKTAAELDSEVKNRESHRAQALADLIRKLAL"
     gene            complement(15199..15432)
                     /locus_tag="WIX18_000338"
     CDS             complement(15199..15432)
                     /locus_tag="WIX18_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237500.1"
                     /translation="MNRRKIYLLSVALFTLAFMLLVLLGAYLLTVGSKAFAVASFLFA
                     FGALFGQIGSLALYLRHKSLRAAQSAAKENRYV"
     gene            complement(15540..16073)
                     /locus_tag="WIX18_000339"
     CDS             complement(15540..16073)
                     /locus_tag="WIX18_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HEZ5237501.1"
                     /translation="MADFNQILTPGDVDGGIINVVNEIPAGSNHKIEWNRKLAAFQLD
                     RVEPAIFAKPTNYGFIPQTLDEDGDELDVLLVTEQPLATGVFLEARVIGVMKFVDDGE
                     VDDKIVCVPADDRNNGNAYKTLSDLPQQLIKQIEFHFNHYKDLKKAGTTKVESWGDAE
                     EAKKVIKESIERWNKQA"
     gene            complement(16175..16633)
                     /gene="nudB"
                     /locus_tag="WIX18_000340"
     CDS             complement(16175..16633)
                     /gene="nudB"
                     /locus_tag="WIX18_000340"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HEZ5237502.1"
                     /translation="MPMAKPLKYPVSALVVLYSGDGGILLIERTHPEGFWQSVTGSLE
                     PGETVAQTARREVWEETGILLADGQLQDWHDSTVYEIYHHWRHRYPKGVFENREHLFS
                     AEIPRDTPIALQPEEHVSYGWFGLEEAAEKVFSPSNRRAILELGRFLGKR"
     gene            16844..16920
                     /locus_tag="WIX18_000341"
     tRNA            16844..16920
                     /locus_tag="WIX18_000341"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:16878..16880,aa:Pro,seq:ggg)
     gene            17078..18904
                     /gene="mafB"
                     /locus_tag="WIX18_000342"
     CDS             17078..18904
                     /gene="mafB"
                     /locus_tag="WIX18_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 2"
                     /protein_id="HEZ5237503.1"
                     /translation="MGISRKISLILSILAVCLPMHAHASDLANDSFIRQVLDRQHFEP
                     DGKYHLFGSRGELAERSGHIGLGNIQSHQLGNLFIQQAAIKGNIGYIVRFSDHGHEVH
                     SPFDNHASHSDSDEAGSPVDGFSLYRIHWDGYEHHPADGYDGPQGGGYPAPKGARDIY
                     SYDIKGVAQNIRLNLTDNRSTGQRLADRFHNAGAMLTQGVGDGFKRATRYSPELDRSG
                     NAAEAFNGTADIVKNIIGAAGEIVGAGDAVQGISEGSNIAVMHGLGLLSTENKMARIN
                     DLADMAQLKDYAAAAIRDWAVQNPNAAQGIEAVSNIFTAVIPVKGIGAVRGKYGLGGI
                     TAHPVKRSQMGAIALPKGKSAVSNNFADAAYAKYPSPYHSRNIRSNLEQRYGKENITS
                     STVPPSNGKNVKLADQRHPKTGVPFDGKGFPNFEKHVKYDTKLDIQELSGGGIPKAKP
                     VFDAKPRWEVDRKLNKLTTREQVEKNVQEIRNGNKNSNFSQHAQLEREINKLKSADEI
                     NFADGMGKFTDSMNDKAFSRLVKSVKENGFTNPVVEYVEINGKAYIVRGNNRVFAAEY
                     LGRIHELKFKKVDFPVPNTSWKNPTDVLNESGNVKRPRYRSK"
     gene            18907..19371
                     /locus_tag="WIX18_000343"
     CDS             18907..19371
                     /locus_tag="WIX18_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237504.1"
                     /translation="MAIWNYRYYLIPSAAIRNKFNANKDIILDEYRSNGFQNFNENKS
                     FENYFIDNDVILLSIINEAKKQLKLKESWDKDAIMFCDNFGNSLTVWPDDIECELDLR
                     FDYTKFIQKTIDWAIKYNCLLVIEKTGNVVSPNINNLMYEIKAYLESKPWPI"
     gene            19560..19742
                     /locus_tag="WIX18_000344"
                     /pseudo
     CDS             19560..19742
                     /locus_tag="WIX18_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223961.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease"
     gene            19754..20041
                     /locus_tag="WIX18_000345"
     CDS             19754..20041
                     /locus_tag="WIX18_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="barstar family protein"
                     /protein_id="HEZ5237505.1"
                     /translation="MQLEIIGSKIYTEQDFHNQISKIFSIQDYYGNNLDALWDLLSTN
                     VERPITLVWKDAMFSKNQLENIFIEIVNVLERVKKQDEDYGFEEKFNYILE"
     gene            20537..21793
                     /locus_tag="WIX18_000346"
     CDS             20537..21793
                     /locus_tag="WIX18_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EndoU domain-containing protein"
                     /protein_id="HEZ5237506.1"
                     /translation="MKSKSGVIASLTGAAVGGTPVDAQTGGAVGQNAVENNLYLTSEA
                     LKKDKQTARKIYSVIKEQVKHECSSTGRITECRQNIGRIIEFTQDKRFDSRFKDLKKE
                     SLYYLNKHPDLVASYLKAEYEKLDREDKSILHRYISPGAEIVSGSLGVVLSGVAGGGS
                     CAETFGLGCAAALVGVTSSYDHVITGTKNFGKKASEQRPTIAVQALKQLGLSEQAAEY
                     VQFSIDLFSVGKSGGGIPKAKPVFDAKPRWEVDRKLNKLTTREQVEKNVQETRRRSQS
                     SQFKAHAQREWENKTGLDFNHFIGGDINKKGTVTGGHSLTRGDVRVIQQTSAPDKHGV
                     YQATVEIKKPDGSWEVKTKKGGKVMTKHTMFPKDWDEARIRAEVTSAWESRIMLKDNK
                     WQGTSKSGIKIEGFTEPNRTAYPIYE"
     gene            21824..22243
                     /locus_tag="WIX18_000347"
     CDS             21824..22243
                     /locus_tag="WIX18_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237507.1"
                     /translation="MKRIKCFCDKFPSGDTFRMCIILDDYDNRVDYYVGIYDYITSTL
                     MSDIYYRSTIDEHFKIIELIENNPNEIYDDGGGQQFCLEFHHDKVIFYHNEFDEEDGY
                     PVLSCSLHTFKTALIAWNAFLQLPKSIHSVVETVIEE"
     gene            22280..23254
                     /gene="mafB"
                     /locus_tag="WIX18_000348"
                     /pseudo
     CDS             22280..23254
                     /gene="mafB"
                     /locus_tag="WIX18_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258126.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 2"
     gene            23265..23726
                     /locus_tag="WIX18_000349"
     CDS             23265..23726
                     /locus_tag="WIX18_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237508.1"
                     /translation="MNLETAENIQCEFEYLALDGYFPMHFASHGQGNKDWQFAVEFIY
                     RLLICQLATLEPINFETKNDILDFCHNLAKQSPFNNDNEVWYQGEIVLTKKGIDLIKE
                     YIPEAFEEWNGKKFELNIPFIKTLKNIFVNYEVAWDENNPLFPIISLNLGT"
     gene            23752..24000
                     /locus_tag="WIX18_000350"
     CDS             23752..24000
                     /locus_tag="WIX18_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EndoU domain-containing protein"
                     /protein_id="HEZ5237509.1"
                     /translation="MEIKKPDGSWEMKKGRGGKPMTNHSMFPKDWDEARIRAEVTSAW
                     EKRKELEGQKWRGTSKSGVEIEGFTEPNRTAYPLYNSK"
     gene            24027..24446
                     /locus_tag="WIX18_000351"
     CDS             24027..24446
                     /locus_tag="WIX18_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237510.1"
                     /translation="MYKIKCFYDQFSSGELFNYCQFLDNSSNQKINTRGTVYQYIIYV
                     LTGDLYLQKDIDENLEFIHQAENNPNEVYSGGGQGFCWDISAEKVVFYHNEFDEEDGW
                     PDLSCSLHTFKTALIAWNAFLQLPKSIHSVVETVIEE"
     gene            24524..24607
                     /locus_tag="WIX18_000352"
                     /pseudo
     CDS             24524..24607
                     /locus_tag="WIX18_000352"
                     /inference="COORDINATES: protein motif:HMM:NF026862.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            24604..24844
                     /locus_tag="WIX18_000353"
                     /pseudo
     CDS             24604..24844
                     /locus_tag="WIX18_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254310.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="immunity protein 31"
     gene            24922..25167
                     /locus_tag="WIX18_000354"
     CDS             24922..25167
                     /locus_tag="WIX18_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEZ5237511.1"
                     /translation="MKDSTGQMRLATKDLAEAIKRGEVRSSAFTTKQLKAIEKGESKI
                     PDYTWHHHQDTGRMQLINEDLHHDTGHIGWRAMSKGK"
     gene            25170..25559
                     /locus_tag="WIX18_000355"
     CDS             25170..25559
                     /locus_tag="WIX18_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237512.1"
                     /translation="MWKIIKEDSDDLGFAIKCLFSQSIDLNEFKLWIEQVIRDMPIED
                     IPFYIFDLADFDVGIGDIGNIVGFAPSSSLPKSKKNALTGIAFLRGIDVYDPPVSKEK
                     ALKALEKYPEIYQKFQHFFPFVELPPL"
     gene            25586..25777
                     /locus_tag="WIX18_000356"
     CDS             25586..25777
                     /locus_tag="WIX18_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEZ5237513.1"
                     /translation="MRLSDGIFDTKQVTKGVFDGKGEAKIPSYTWHHHQDTGRMQLIS
                     ERKHTQTGHIGGEAMDKGK"
     gene            25780..26178
                     /locus_tag="WIX18_000357"
     CDS             25780..26178
                     /locus_tag="WIX18_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237514.1"
                     /translation="MLGLTRNNCDDLGFAILCYERNAADKKEFLDWLYEIVRTVPAES
                     FPRYLIDLIDCLESDDCSINIYNIIGFVPTTGMTKKEKDAVYGITYIRNQEFYDIPIT
                     REKALKALKKHPEIYQKFRHFFPFVELPPL"
     gene            26279..26668
                     /locus_tag="WIX18_000358"
     CDS             26279..26668
                     /locus_tag="WIX18_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237515.1"
                     /translation="MWKIIKEDSDDLGFAIKCLFSQSIDLNEFKLWIEQVIRDMPIED
                     IPFYIFDLADFDVGIGDIGNIVGFAPSSSLPKSKKNALTGIAFLRGIDVYDPPVSKEK
                     ALKALEKYPEIYQKFQHFFPFVELPPL"
     gene            26769..27158
                     /locus_tag="WIX18_000359"
     CDS             26769..27158
                     /locus_tag="WIX18_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237516.1"
                     /translation="MWKITKEQGQDLSFATYCLLSAAINLQEFKLWLEKVVLDMPIDN
                     IHFYIFDLIDLKEGVGDIYNILDFVPNSDLSKDQDDALTGIAFLRGIDVYDPPVSKEK
                     ALKALKKHPEIYQRFQHFFPFVELPPL"
     gene            27281..>27426
                     /locus_tag="WIX18_000360"
     CDS             27281..>27426
                     /locus_tag="WIX18_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HEZ5237517.1"
                     /translation="MKTLLLLIPLVLTACGTLTGIPAHGGGKRFAVEQELVAASSRAA
                     VKEM"
BASE COUNT         6939 a         5999 c         7504 g         6984 t
ORIGIN      
        1 cagataccga acaccaaaca tcaaatatat atatcaggat aaccaaggga cggcagaagc
       61 taggaatacc ggaataaaaa attcaaacgg aaaatatata gtctttattg attcggatga
      121 ttttattaat tgtcaggtct tgctggattt tcttagtaaa gatgatattg atatgccgga
      181 tgtggttttt ttaaatgcgg ttaaatatga taagggaagt gtttcacatt ttggcgaaga
      241 ttatcagcct gaaaaaatac tcaagcaatc caaagtcgaa gttttgaaag gattatgccg
      301 atttagaaaa tttccgggtt cggcgtgtaa taagattata aaaagggaat tgattatcaa
      361 agaaaaactg ttttttgaaa aagaggttta tgccgaagat atcgaatggt caatgagatt
      421 atttaatgcg gcaacaactt tttcttattt ggacggttgt tattactatt atcggcaggg
      481 aagaaaagat tctaaaacag gaactgtttc ggaaaaaagt ataaagtcat tattatatat
      541 tttggagaaa aatgcggaaa tggaatttga tagggatata tcaagttatc tttattcttt
      601 tctttcctac gaatatctcg ttttgctttt tatcatgacg agtaaaaata tagagtgtga
      661 tgctgatata aaaagaaggg cgtatcattt aaggtttatg ctgttaaagt ccaataaatt
      721 gatatataag ctgatattcc cgataatcac attattcggg gtcgatatta caggcaggat
      781 tttaaaagca atcaggggga atatttaata aatcctttaa cactatacat cttaccgaag
      841 gaggaaaaat gaacgcaatc cgaactttcc aaaaccgcac gcccgaaatc cacgaaagct
      901 gtatgataga cgaagcgtgc gtcgtcatcg gcgaagtgtc gcttgccgaa gacgtttccg
      961 tgtggccgtg cgccgtgttg cgcggcgatg tgaacagcat caccgtcggc gcgcgcagca
     1021 atatacagga cggcagcgtc ctgcacgttt cccacaaaac cgccgccaaa cccgaagggt
     1081 cgccgctggt tatcggcgaa gacgttaccg tggggcacaa agtgatgctg cacggctgcc
     1141 gtatcggcaa ccgcgtcctg gtcggcatgg ggacgacggt tctggacgat gccgtgattg
     1201 aggacgaagt gatgatcggc gcgggcagcc tcgtgcctcc gcgcaaacgt ttggagggcg
     1261 gctatcttta tgtcggttcg ccggtcagac aagtgcgcgt gttgaccgat gaggaaaaag
     1321 cctttttgaa gtattccgcc gcgcattatg tgaagctgtc gaaacagtac gggatgtgaa
     1381 atcacatcgg cgttcttgcg tcagccccaa attcatgcgg atgggacgca tccgataacg
     1441 gtatccgatg cgccttgatt ttgaccgtct gcgtttgagt tgcaggcaaa aatgccgtct
     1501 gaaagccttt tttcgggttc agacggcatt ttatcgccta aagtttgacc gaatgttcgc
     1561 gcgtttcgtg gaacacgatg tccggccagc gttcttgcgt cagccctaaa ttcatgagga
     1621 cgggatgccc gataacggta tccgatgcgt cttgattttg atcggtgcat ttgagttgca
     1681 ggcaaaaatg ccgtctgaaa gccttttttc gggttcagac ggcattttat cgccgattgc
     1741 tttttacagt ttaaccgaat gttcgcgcgt ttcgtggaac acgatgtccg gccaacgttc
     1801 ttgcgtcaac cccaaattca cgcggttggg ggcgaggtag gcgaggttgc cgcccgcgtc
     1861 gatggcgagg ttgcccgcgt tggctttttc aaactccgcc agttttttct tgtcgtcgca
     1921 cgatacccag cgcgccgacc agatggatgc gctgtcgaac acggcttcta cgccgtattc
     1981 gttggccagc cgcgaggtaa cgacttcaaa ctgcaacacg ccgaccgcgc ccaaaatcaa
     2041 atccgcgccg ctcatcggtt tgaatacctg taccgcgcct tcttcgccaa gctgttgcaa
     2101 acctttttgc agttgcttga ttttcagcgg gtttttgatg cggacgctgc ggaacagttc
     2161 gggcgcaaag aatgggatgc cggtaaacgc cagttgttcg ccttcggaga agctgtcgcc
     2221 gatttggatg ttgccgtggt tcgggatgcc gatgatgtcg ccggcgtagg cttcttccac
     2281 cagctcgcgg tcgtgcgaca taaaggttac cacgctggag gcagcgattt cgcggttgat
     2341 gcgcaggtgt ttcatcttca taccgcgctc gaatttgccg gagcagacgc gcaagaaggc
     2401 gatgcggtcg cggtgtttcg gatccatatt ggcttggatt ttaaagataa atccggagaa
     2461 tttcggctcg tccggcttga ccatacgtac ggtcgcgtcg cgcggtttcg gcgcgggcgc
     2521 ccagtcaatc aatgaattga ggatttcctg aataccgaag ttgttaatcg cagagccgaa
     2581 gaatacgggc gtgagttcgc cggcgaggaa ttcgtcgaga ttaaactcgt tggaagccgc
     2641 ctgcaccaat tcgatttcgt cgcgcaactg ctggatttcc aatggaaagc gttgttccaa
     2701 ttcgggattg tcgatgcctt tgatgatgtc gaactcgtgc ggcagacgtt cgccaccggc
     2761 ttcaaagaga tagatttcgt cgttcaggat gtggtacacg cctttgaagt ttttgcccat
     2821 gccgatcggc caggttacgg gcgcgcagcg gatttgcagg atgttttcca cttcgtccag
     2881 caactccaaa gaatcgcgca cttcgcggtc gtatttgttc atgaacgtga caatcggcgt
     2941 attgcgcagg cggcagacgt tcaagagttt gatggtttgc gcttccacac cttttgccgc
     3001 gtcgatgacc atcaaggcgc tgtccacggc ggtcagaacg cggtaggtgt cttcggagaa
     3061 gtcttggtgt cccggcgtgt ccaagaggtt gacggtgtgg tctttgtagt cgaactgcat
     3121 cacgcttgat gccacggaaa tgccgcgctg cttctcgatg tccatccagt cggaggtggc
     3181 gaatttgccg gtttttttgc cttttaccgt acccgcgctc tgaatcgcgc ccgaaaacag
     3241 caacagcttt tcggtcagcg tggttttacc cgcgtcgggg tgggagatga tggcaaacgt
     3301 gcggcggcgg cgcacttggt cgaggatttc ttgggacatg gttttctttg caaaaaggtt
     3361 caggccgctt ttcagacggc ccggacagtg tttgagacgg cgaaattgta caaaaaaatg
     3421 cctgataatt caatgttgga ggcggtcagt gcgtgctgcc gtaaatctct ttttcgtctt
     3481 tcaggacggc atcggcggtt tcccacgcgc cgccgcgcca gactttgtaa aagcagcttt
     3541 ctcgcccggt gtggcaggcg atgccgccgt tttgggcgat gagcatcaca atggcgtcgc
     3601 cgtcgcagtc gaggcgcagt tcgcggactt tttgcgtgtg tcccgactct tcgcccttca
     3661 tccattgttt ttggcgcgaa cggctgtaat agtgggcaaa gccggtttcg acggtttttt
     3721 gcagggcttc ggcgttcatc cacgctacca ttaaaacacg tttggtttcg gcatcttggg
     3781 cgatggcgca aaccaaacct ttttcgtcaa atttgacggc ttcaagcagg tttttatcca
     3841 tatttccttt cagacggcat agtcggggcg gtcagaggcg cacttcgatg ccggcttcgc
     3901 gcatagcgcg tttggcttcg cggatggcga tttccccgaa atggaaaacg ccggcggcaa
     3961 gtacggcatc ggctttgcct tcggttatgc cttcaatcag gtgccggaca ttgccgaccc
     4021 cgccggaggc gatgacgggg atgtcgacgg cttcggcaac ggcgcgggtc agcggcaggt
     4081 tgaaaccctg tttcgtaccg tccctgtcca taccggtaag caggatttcg cccgcgccgc
     4141 gtttttgcat ttcgaccgcc cattccaccg catccaaacc ggtcggattt cgcccgccgt
     4201 gggtaaagat ttcccagcgt gtgttttcgg ggttgacggc tttggcatcg acggcggcga
     4261 cgatggcttg cgaaccgaaa aatccggcgg cttcgtcaat caggtcggga cgggtaacgg
     4321 cggcggtgtt gatgctgact ttgtccgcgc cggcattgag caggcggcgg atgtcggcaa
     4381 cggtgcgtac gccgccgccg acggtcagcg ggatgaagac ttgtccggca acttcttcga
     4441 tgatgtgcag gatggtatcc cggttgtcgg atgaggcggt gatgtcgagg aaggtcaatt
     4501 cgtccgcgcc ttcgccgttg tagcgtttgg cggcttcgac ggggtcgccc gcgtcgcgca
     4561 aaccgatgaa gttcacgcct ttgacgacgc gcccgtcttt tacgtcgaga caggggatga
     4621 tgcgttttgc cagtgccata atcggatgcc tttagtcgag ggaatctgcc agttgctgcg
     4681 cttgggcaaa atcgatgctg ccctcgtaaa tcgcgcggcc ggtaatcgcg cctgctacgc
     4741 catgtttttc ggcggcacac agggcgcgga tgtcgtccaa gccggtcagt ccgccggagg
     4801 cgatgacggg aatgcggacg gtttgggcga gtttgaccgt cgcgtcgatg ttcacgccgc
     4861 tcatcatacc gtcgcgcccg atgtcggtgt agatgatgct gttgacgccg tcgtcttcaa
     4921 agcgttttgc caaatcaatt acatgatgcc cggttacggt tgcccagccg tcgatggcgg
     4981 ccataccgtc tttggcatcc agcccgacaa taatcctgcc ggggaaggct ttgcacgcct
     5041 cgcgcacgaa gtcggggttt ttgactgccg ccgtgccgat aatcacgtcg tttaagccca
     5101 aatccaaata ttgtccgatg gttttcaaat cgcgtatgcc gccgccgagc tgtacgggga
     5161 tgtctttggc gacggcggcg aggatgtctt tgatggcggg caggttttgc ggaacgccgg
     5221 caaacgcgcc gttcaaatcc accagatgca ggcggcgcgc gccttgtttg aaccagtgca
     5281 gtgcggtttc ggcgggcgaa tcggaaaaga cggtcgcctc ttccatcagc ccttgtctca
     5341 ggcggacgca gcgtccttct ttcaaatcga tggcgggtat cagcagcata gtttttttcc
     5401 ttgtgcgggg ccgtgtccgg cttaccagtt taaaaagttt ttcaacatcg tcagcccggc
     5461 atcgtggctt ttttcggtgt gaaattgcgt ggcgaatacg ttgtctttgc cgacgatgca
     5521 ggcaaacggg gacgggtagt cgctttcgcc caatatggtt tcgggatttt cggggtcgaa
     5581 atagtagctg tggacgaagt aaaaacgcgt gttttgggga atatctttaa acagcgggtg
     5641 gttttgggtt tggcgcacgg tgttccagcc catatgcggg actttcagac ggcatccctg
     5701 ccggtcgcgg aggtcgcgct caaagcgtct gactttgccg ccgaaccagc ccaagccgtc
     5761 ggtgtttcct tcttcgctgt ggtcgaataa aagttgcgcg ccgacgcaga ttccgaaaaa
     5821 gggtttgttt tttaaggcat ctttgactgc ctcgtccagg ccgccgcgtt ttaatgccgc
     5881 catacagtcg ggcatcgcgc cctgaccggg aaaaatgact ttgtcggcgc gggacacgcg
     5941 gtcggggtcg ccgcttaaaa agatttcggt attttttccg gcaagctgcc ccgccgtccg
     6001 gacggatttc aatacggaat gcaggttgcc cataccgtaa tcgataatgg cggtttgcat
     6061 ggcttcctcc tctttttttg caatatggct gcgattttaa caaacaaatg tgccgtgctg
     6121 ataaaaatgc cgtctgaaaa cgggagtctg tcttcagacg gcatagggtt taaacccgga
     6181 aagccgtttg tcagccttcc atttgttttg cctgaacggc agtcagggcg atggtaaaca
     6241 cgatatcttc taccagtgcg ccgcgggaga ggtcgttgac cggtttacgc aggccttgca
     6301 gcagcgggcc gacgcttaag acgttggcgt tgcgttggac ggctttatag gtgcagttgc
     6361 cggtgttcag gtcggggaag accaaaacgg ttgcctgtcc tgccaccggg ctgcccggag
     6421 ctttggattt gcccacaccc ggcacggttg ccgcatcata ttgcagcggg ccgtcgatgg
     6481 cgaggtcggg gcgtttttcc cgggcaagtt tggttgcttc gatgacggta tcgacatcgg
     6541 ggccgctgcc ggagttgacg gtggagtagg aaatcatcgc cactttcggg tcgatgccga
     6601 aggcttttgc ggaatcggca gactggatgg cgatgtcggc aagctgttgc gcggtcgggt
     6661 tcggattaac cgcgcagtcg ccgaagacga ggacttggtt gggcagcagc ataaagaata
     6721 cgctggacac gaggcttgcg cccggtgcgg ttttaatcag ttgcaaagcg gggcggatgg
     6781 tgttggcggt ggtgtgaacc gcaccggata ccaaaccgtc cacatcattt tgcgccatca
     6841 tcatcgtacc gagtaccacg gtgtcttgca gttgcttgcg cgcgtcttcg ggtgtcaggc
     6901 ctttggattt gcgcagttcg cacatcggct cgacgtattg ttcgaccaat gaggcgggat
     6961 cgatgatttc caaagagtcg ggcaggctga tgccgcgttc tttggcaacg gcttcgactt
     7021 cttcgcgttt ggcaagcagg acgcagcggg caatgccttt ttcgtggcag atggcggcgg
     7081 cttggacggt gcggggttct gcgccctcag gcaggacgat gcgtttgtcg gcttggcggg
     7141 cgaagtcgat caggttgtag cggaattgcg ccggcgacag gcgttttgct tcgcggcctg
     7201 ccaatacgga tacgtctttc agcgcgtcgc tcgaaccgaa gaaggtcagg ccggtttttt
     7261 cggctgccgc ttcggcaacg gaggctgccg cgccgtccac gacaaaacct tccaatacgc
     7321 ccggcgcggc ggcgaagaac tgtttggcaa ggttcagccg atttgccagt tcgtcggcat
     7381 cggcgttgtc ggaacggacg gcgaagacgg ctgccgcgtc aagggacaat gccagttcga
     7441 cgtttttgcc tgcgaggtag attttgtcgg catcgggcgc gatgccttcg atgacgaggt
     7501 tggcggcatc gagtgcggca actttgccga ccagtgcgtc gaaccagtcg tcgcttttgc
     7561 cttgcgcgag cagggtttcg gcggttgcgt caacggcttg gaaaatttgt gcgtccagtg
     7621 cttttgcaaa ggcttgtgcg gcggcggagg cgtccagtcc ggcagatacg ggtacgatga
     7681 gtacttttgc catgatatat cctttcgtat gctgcggtgt gcggcatatg tggttggaag
     7741 gggcggcata taggcagaaa cggctgcctg cgtgccgtgc gtgccgtgtt tggcttgagg
     7801 cgcgcaggtt gaatatagca aacaaattct gtttccaaca agataaatat ccgcaggctt
     7861 gtggatgctg ccgcctttca gagggtattt ccggggaaga acagggcggg accgtccaaa
     7921 tggaggacgg cggaaatgcc gtctgacagg gtgggggcgg aagggaggtt gagcgtgagg
     7981 acggtttgtc cgacccggag gctgatttcg gtatgccgcg ctttgggcgt ggttttgaga
     8041 accacggcgt gaatggaggc ggtgggtgcg gaatgggggt gaaggctgaa ctgttccgga
     8101 cggatgagca gtgtgccgcg tgtgcctgcg ggtgcgccgc tttgaacggg caggcggccc
     8161 aatccgcaat cggcggtgcc gtcggcgttg agcgcggcgg ggaacacgat gccttcgccg
     8221 ataaacaggg cggcatcaag gtcggcaggt tgtcggtaca attcgtgagg gcttgcagtt
     8281 tggaggatgc gcccctgttt catcacggca atccggtcgg cgtattgcag ggcttcttcg
     8341 cggtcgtggc tgacgaaaac ggcagatttg ccgttggcgc gcagggcggc aatcatgtct
     8401 tcgcgaatct ggcggcgcaa ctgttcgtcc agcgcgctga agggttcgtc caacaaaatc
     8461 agttcgggat cgggtgcgag ggcgcgggcg agggcgacgc gctgttgctg tccgcccgaa
     8521 agttcgtgcg gatagcgtcc ggcaagttcg gaaatgccgg tcaattccaa catagcttcg
     8581 atgcgctgcc gctcttgcgc cgtcttgcct ttgccgttgc ccagcccgta ggcggtgttg
     8641 cggtaaacgg tcaggtgggg gaacagcaca ccttcctgta cgacataacc caaacggcgt
     8701 tcgcggacgg ggaggttggt atttttcgag aagatggttc tgccggaaag cgaaatttcg
     8761 ccaaaatcgg gttgttcaaa accggcaagg cagcgtaaaa gggtggtttt gccgcagccg
     8821 gacgcgccga cgataaagag gatttcgccc gggtcgaggc tgagcgaaat gtcgtttaaa
     8881 actggggtgt tttgaaaact tttggacagg tgtccgatgt gcagggcggc ggtcatggcg
     8941 gtacttcctc aagctgttat ttgaaggcgt atttcttcag caggaatacg gggatgccgg
     9001 aaaataatac cagcatcagc gcgtaagggg tggcggcggc gtattgtgcg tccgatgtgt
     9061 attcccaaac ggcggtggag agtgtgtgga catcgtcggt ggtcagcagc agggtggcgg
     9121 tcagctcttt catcagtttg aggaagacga gtgcgaatgc ggcggtaatg ccgggcagga
     9181 tggacggcag taccaacgtc ctgaaaataa agaagtgtcc gcgccccaat gttgcgccga
     9241 cctgttccat cccttttggg agttgttcca aggaagtcct cagggtggtt tgcgccatcg
     9301 gcaggtaaag catgaaatag gcaaggatga cgacgataaa ggtttggtaa acggcagggg
     9361 tgtagttgat gctgaaataa accaaggata gggcgataac caaaccgggg acggcgtgca
     9421 gtaaaaacgg cagcctgtct atccaaacgg ttaaaaaatt gcgatagcga accgatgccc
     9481 aaacaagggg caaggcacat aatatagtca aaatcgcacc taaagccgat acgcttaagg
     9541 aacggataaa ggcatcaaat acggatacga gcgcgaatgt gccggaagtg ccgaccatca
     9601 tccaatgtat caatacgcca aaggggataa taatgcccaa agtcaacaag ctgcttaaaa
     9661 aaacaatcgc gccaatctga ccgggcagtt tgagggtttt gacgggataa ggacgggcaa
     9721 cgcctttgcc gctgtggtaa atcttggctt tgccgcgaaa tatgctttct ccaaatacga
     9781 cgatgccgca caccgccatt aaaacagcgg aaagcagggc ggcggtattg ttgttgtagg
     9841 acatttcgta ttcttggaaa atggcggtgg taaaagtggg gtagttcaaa atggataccg
     9901 cgccaaattc gaccaacata tgcagggcaa tcagtaacac gctgctgccg atggcgggtt
     9961 tgagctgggg gaggatggcg gaaaaaaagg tttgcaggcg gcttttgccc aaggacaggc
    10021 tgacttcttc gtaagacagg ctgatgcgtt tgagtgccgc ctcgacgggc aggtaggcga
    10081 gcgggaacga ggacaggctc ataatcatca ctgtccccca aaagccttcg acacggaagg
    10141 tcaggctgat ccaggtgaaa cagctgacaa atgcggggat gcacaaaggc agggtgattg
    10201 ccgtctgaaa aaaggttttg ccgaagaagc ggtaacgttg gaacaaaagg gcgcaggcaa
    10261 tgcccaaaac aatggaaatc agggtaacgc ccgccatcat cgtcaaggtg ttggagagca
    10321 aatcccacat acgcgggcgg aacaacagtt cgacggcgcg gttgatgccg acctgccacg
    10381 aacgcatagc gacatataaa aaaggcaggg taagcggtag ggcaatcagt aggatgaggc
    10441 cggtaagcca aatgggtatt tttttaggag acatagtgtt ttttatcggc aaaacgggcg
    10501 gacagtataa atgtccaccc gtttgacaat ccgaaaacgg cttatttcat accggcttgc
    10561 tcaagcagcc gggtggcgtg ttctttttcg gaaacagtgg tggcggacac ttggggtgct
    10621 tccaacttgg cgatgggttc caaattgaag gtggatacca cgtgcggatt caaaggatac
    10681 tcggcacgga cggcggtcag ggcgcgctgt ccttccttgc tggcgaggaa ggcgacgaat
    10741 tttttcgcct catccttgtt ttgggaggat tttaacacgg ctgcgccgga ataggtaacg
    10801 agtgcgccgg gatctctgtg gcggacgaaa ttcaggcggg tgtggacatt ttgtacgcct
    10861 ttttcacgcg caaaagcgtg ccagtagtag ttgttgatga gggcggcatc gatttcgccg
    10921 ttttcaaccg cttgaagggc gacggagttt ttagcgtaag gcttgccgta ttctttcaga
    10981 cctttgagcc atttcaatgc ggccgcttcg cctttcagtt tgacgatggc gacaacctgt
    11041 tccaagaacg cgccggaagt gggggcgtaa ccgatgcggt ttttccattt cggcgtggcg
    11101 taattcagga cggatttttc caaatctttt tcagacagtt tgcgggtgtc gtaaacgacg
    11161 acgcgcgaac gtccgctcag tgccacccag tcttttttgg cggcaaccgg cacgcccttg
    11221 ccgcgtgttt cgttgatggt ggaggcgggc aggggctcta ggaggttggc ggcggaaagg
    11281 gtggcgagtg ccgggatttg ttcggaatag aatacgtcgg cggggcttcg gctgccttct
    11341 tctttgattt gaccggcaag ctggtcgcct ttggcgctgt tgagtttgac tttgatgccg
    11401 gtagcccggg taaaggcatc tgcaacggct tgtgctgctt ctttgtgttg gccgttgtac
    11461 acggtaatgt ctgccagcgc gggggttgcg gcggtcaggg ctgcggcaag cagtgcgtat
    11521 cggatagatg ttttcatatc gattttctcc taatgaatga gagtgtacac cttgttaaaa
    11581 cataacggtg tgtagtgtat tccttcttct ttataaatgc aaataattat tttttaaatt
    11641 tgttattatc cgatccggtt atggtttgtt ctgacttgta ttttttccgt gcatcgcgcc
    11701 cgtaaggcgg aagcggcggg caatgcgtgg cggaatgtgg gtaaaggcgg cattttgatt
    11761 tgtcggaatg cttgagaacc cctctcttta aaacagcgtc tgaacagggt tgccggaata
    11821 gtattgccat cccggcagat acagtttgtc ggggtcttgc caatattgtt catccagact
    11881 gttcggcagt gaggcggttt tgttgtcgag atgttttgtt atatcccaca tttctttcag
    11941 gtttttacct tccgattgga ggtggcggat ttcttttctc aatgcgtctg ccgcccgatg
    12001 gatcagcatt gcgctgtgta tcgcgccgat ttttttcaga acggaacaag tcttttcggc
    12061 ggcgggaaaa ccccaattgc agacaaattg cagtatgccg ccgttaccga tatcggcttc
    12121 tgtccgccaa atcaaaacca gctcctgttc ccgcccgtcc atgctttcga gtttgccgtc
    12181 atgctgttca aaaagtttgt ccaccgcctg ccacatcatc tgttcgaagc ggtcggcttg
    12241 ggtatccgta tcggtcatcg tgttcttgcc ttttaaaaat gccgtctgaa catttcttca
    12301 gacggcatcg ggggttaagc caacatttcc cgccagcgtt tgacttggaa acggacttgt
    12361 tcaggcgcgg tgccgcccaa gtggttgcgc gcgtttaagc tgccttcggg tgtcagcacg
    12421 ccgtaaacgt cgtcggcaat caaatcgctg aaaccttgta agacttcgag cggcagttcg
    12481 ctcaaatcga cgccagcttc atcggcgtgg cgcacggctt gggcgacgac ttcgtgggca
    12541 tcgcggaagg gcataccttt tttaaccaga taatccgcca agtcggtggc ggtggcaaaa
    12601 ccctgcatca cggcggcgcg catattgtcg ggtttgacgg ttacgccgcg catcatatcg
    12661 gcgtaaatcc gcagcgtgtc gataagcgtg tcggcggtgt caaacaaagg ttctttgtct
    12721 tcctgattgt ctttgttgta cgccaagggc tgcgatttca tcagggtaat caagccgata
    12781 aggtgtccga tgactcggcc ggatttgccg cgcacgagtt cgggcacgtc ggggtttttc
    12841 ttctgcggca tgatggacga acctgtgcag aaacggtcgg cgatgtcgat aaagccgaaa
    12901 cgcggactca tccacaaaat caattcttca gacaggcggc tcaggtgaac cataaccagc
    12961 gaggcggcgg cggtgaactc gacggcaaaa tcgcggtcgg atacggcatc gagcgagttt
    13021 tggcagattt gttcaaagcc caatagctcg gcggtaattt cgcgctgaat cgggtaggtc
    13081 gtcccggcaa gggcggctgc gccgagcggc atacggttga cgcggcggcg gcagtccgcc
    13141 atccgttcgt tatcgcggcc gagcatttcg acgtaggcga gcatatggtg tccgaagctg
    13201 acgggctggg cgacttgcag gtgggtaaag ccgggcataa cggtttcggc gttttgttcc
    13261 gccaaatcca gcaatgccgt ctgaaggttt tgaatcaggc tttggataac ggtaatctgg
    13321 tcacgcagcc acaggcggat gtcggtggcg acttggtcgt tgcggctgcg gccggtgtgc
    13381 aggcgtttgc ccgcgtcgcc gattttgtcg gtcaggcggc gttcgatgtt catgtggaca
    13441 tcttccaaat cggacgacca ttcgattttg ccgctgcgga tttcttcgag gatttccgcc
    13501 atgccccgac ggatgtccgc caaatcgcct tcgtccaaca cgccggtttc tttcaacatt
    13561 tgcgcgtgtg ccagcgagcc ttgaatgtcc cattcggcaa gccgtcggtc gaaaccgatg
    13621 gaggcggtgt attgtttgac gagttcggaa acgggttcgt tgaaacgtcc ggaccaggtt
    13681 ttgtcgtgca taaggattcc ttgatggggt tattcggtgc ggtatttttc caaaaggcgg
    13741 cggaagggtt cgccggtttc ggggtgtttc aggccgtagg cgacggtggc ttcgaggtag
    13801 cccagtttgc tgccgcagtc gtagcgcgtg ccttcaaagg ggtgcgccag gacaaattcg
    13861 tgatcgagca gcttggcgat gccgtctgta agctggattt cgttgcccgc gccgcgcggc
    13921 agtccggtca gtaagtcgaa aatgcgcggg gtaaggatgt agcgtccgac gacggcaagg
    13981 ttggagggcg cgtcttcggg cttgggtttt tcgacaatgc cgataatgcg ttggaactgt
    14041 ttgagctgtt cggtttcgac gatgccgtat gagccggttt gcgatgcttc aacggtttct
    14101 acgcccaaaa tgctgttgcc gctgcgcccg tacacttcga ccatttgttt gagcgcgcct
    14161 ttgggggcat caatcaggtc gtcggcaagg ataacggcaa agggttcgtc tccgatggcg
    14221 gcgcgggcgc acaagacggc gtgtcccaag cccagtgctt ccgcctgacg gatgtagagg
    14281 caggtaatgt tcggcggcag gatgttgcgg acgtgttcca acaatttgtc tttatggcgc
    14341 atttccaact cggtttcgag ttcgtatgcc ttgtcgaaat ggtcttcgat gctgcgtttg
    14401 ttgcgtccgg taacaaacac catttccgtg cagccggctt ccacggcttc ttctacggcg
    14461 tattggatca gcggcttgtc gacgatgggc agcatttctt tcgggcttgc cttggtggcg
    14521 ggcaggaagc gtgttcccat ccctgcgacg gggaagacgg ctttttttat cggtttcatt
    14581 ctttttcctt tgtattgttt tgatgtttaa agggcgagtt tgcggattaa atcggcgagt
    14641 gcctgcgcgc ggtggctttc gcggtttttg acctccgaat ccaattcggc ggcggttttg
    14701 ccgtgtccgg gcagataaaa atacgggtcg taaccgaaac cgttttcacc ggcgggaacg
    14761 ccgttccatt gtccgtgcca tacgccctcg gcgataattg gacgcgggtc gtctttatgg
    14821 cggacaaaaa ccaatacgca gacgtagcag cagcttttgt cggtcttgcc ggcaagttcg
    14881 gcggcaagtt tcaggttgtt ggcggtatcg gatttgggat tgtcgcccgc gtaacgtgcg
    14941 gaatggatgc ccggcgcgcc gtttagggcg gcggcacaga tgccgctgtc gtcggcaagc
    15001 gcgggcagcc cgctgtattc ggcggcatgg cgtgcttttg ccagcgcgtt ttcgacaaag
    15061 gtgggatagg gttcggggca ttcgggtatg ccgaatgcgg attgcggcaa tacggtgatg
    15121 ctgtaaggtt tgaataagtt gccgaattct tcgagcttgc cggcattgcc gcttgccaaa
    15181 acgatttttt ccggtttttc agacatagcg gttttccttt gcggcggatt gggcggcgcg
    15241 tagggatttg tgccgcaggt agagggcgag gctgccgatt tgtccgaaca gtgcgccgaa
    15301 tgcgaaaaga aaggaggcga cggcgaaggc tttgctgccg acggtcagca gataagcacc
    15361 caagaggacg agcagcataa atgccagtgt gaagagggca acagacaaca gatagatttt
    15421 tcggcggttc atggcgttcg gtcggaaacg gtatgttcgg attatagccg attgggacgg
    15481 tattccctag agcttggaaa aatgccgtct gaaacggcgt tcagacggca tggcgggcgt
    15541 tatgcctgtt tgttccaacg ttcgatggat tctttgatga cttttttcgc ttcttccgca
    15601 tcgccccacg attcgacttt ggtcgtacct gcttttttca ggtctttgta atggttgaag
    15661 tggaactcga tttgtttgat cagctgttgc ggcaaatcgg acaaagtttt gtaggcgttg
    15721 ccgttgttgc ggtcgtcggc aggaacgcag acgattttgt cgtccacttc gccgtcgtca
    15781 acgaatttca tcacgccgat aacgcgcgct tccaagaata cgccggttgc caaaggttgt
    15841 tcggtaacga gcagcacgtc caattcgtcg ccgtcttcgt ccaaagtttg gggaatgaag
    15901 ccgtagttgg tcggtttggc gaagatggcg ggttcgacgc ggtcgagttg gaatgcggcg
    15961 agtttgcggt tccactcgat tttgtggttg ctgccggcgg ggatttcgtt gacgacgttg
    16021 atgatgccgc cgtccacatc gccgggggtc aggatttggt tgaagtctgc catttggttt
    16081 cctttgtttg ggaaagtttg aagtttgaaa gtatagcaca aacgtccggc tgaaaatgcg
    16141 cccgatgccg tctgaaaggg tgtacgggcg cgtgttaccg tttgcccaaa aacctgccca
    16201 gttccagaat cgcgcgcctg ttggacgggg aaaacacttt ttccgccgct tcttccaagc
    16261 cgaaccagcc gtaggagacg tgttcttcgg gttgcagggc gatgggcgta tcacgcggga
    16321 tttcggcaga gaagaggtgt tcgcggtttt caaacacgcc ttttggatag cggtgccgcc
    16381 agtggtggta gatttcgtaa accgtgctgt cgtgccagtc ttgaagctgc ccgtccgcca
    16441 gcaggatgcc ggtttcttcc caaacttcgc gccttgccgt ttgggcgacg gtttcgcccg
    16501 gttcgaggct gccggttacc gactgccaaa atccttccgg atgcgtgcgt tcgatgagca
    16561 ggatgccgcc gtccccgcta taaaggacga ccagtgcgga gacggggtat ttgagcggtt
    16621 ttgccatcgg catctttcgg cgggctgcgg taatgaaggg gcggattata gcaaacgccg
    16681 cacgttatgg cgtttatcct tttccgtatc cttttttctg cacggatggg acgcgccggt
    16741 gtttgccggt aaattttccg ttgtgtcaaa aagataaggg cggttgtgat tttaatgctt
    16801 gccaaagcgt cgggcggaaa ctataatccg aaacttatcg agtcggagtg tggcgcagtc
    16861 tggtagcgca cttgcatggg gtgcaagggg tcgaaggttc gaatcctttc actccgacca
    16921 aaaattccga aagccgcttt caaaagcggc ttttttgccg tccgtatgat tatgatgtag
    16981 agtacgcggc gacagacatt caaatgccgt ctgaaaaccg ttcagatggc atctctttat
    17041 cttagtttca ttccgtacca tcttaaggaa catcaaattg ggcatttccc gcaaaatatc
    17101 ccttattctg tccatactgg cagtgtgcct gccgatgcat gcacacgcct cagatttggc
    17161 aaacgattct tttatccggc aggttctcga ccgtcagcat ttcgaacccg acgggaaata
    17221 ccacctattc ggcagcaggg gggaacttgc cgagcgcagc ggtcatatcg gattgggaaa
    17281 catacaaagc catcagttgg gcaacctgtt catccagcag gcggccatta aaggaaatat
    17341 cggctacatt gtccgctttt ccgatcacgg gcacgaagtc cattccccct tcgacaacca
    17401 tgcctcacat tccgattctg atgaagccgg tagtcccgtt gacggattca gcctttaccg
    17461 catccattgg gacggatacg aacaccatcc cgccgacggc tacgacgggc cacagggcgg
    17521 cggctatccc gctcccaaag gcgcgaggga tatatacagc tacgacataa aaggcgttgc
    17581 ccaaaatatc cgcctcaacc tgaccgacaa ccgcagcacc ggacaacggc ttgccgaccg
    17641 tttccacaat gccggcgcta tgctgacgca aggagtaggc gacggattca aacgcgccac
    17701 ccgatacagc cccgagctgg acagatcggg caatgccgcc gaagccttca acggcactgc
    17761 agatatcgtc aaaaacatca tcggcgcggc aggagaaatt gtcggcgcag gcgatgccgt
    17821 gcagggtata agcgaaggct caaacattgc tgtcatgcac ggcttgggtc tgctttccac
    17881 cgaaaacaag atggcgcgca tcaacgattt ggccgatatg gcgcaactca aagactatgc
    17941 cgcagcagcc atccgcgatt gggcagtcca aaaccccaat gccgcacaag gcatagaagc
    18001 cgtcagcaat atctttacgg cagtcatccc cgtcaaaggg attggagctg ttcggggaaa
    18061 atacggcttg ggcggcatca cggcacatcc tgtcaagcgg tcgcagatgg gcgcgatcgc
    18121 attgccgaaa gggaaatccg ccgtcagcaa caattttgcc gatgcggcat acgccaaata
    18181 cccgtcccct taccattccc gaaatatccg ttcaaacttg gagcagcgtt acggcaaaga
    18241 aaacatcacc tcctcaaccg tgccgccgtc aaacggcaaa aatgtcaaac tggcagacca
    18301 acgccacccg aagacaggcg taccgtttga cggtaaaggg tttccgaatt ttgagaagca
    18361 cgtgaaatat gatacgaagc tcgatattca agaattatcg gggggcggta tacctaaggc
    18421 taagcctgtg tttgatgcga aaccgagatg ggaggttgat aggaagctta ataaattgac
    18481 aactcgtgag caggtggaga aaaatgttca ggaaataagg aacggtaata aaaacagtaa
    18541 ctttagccaa catgctcaac tagagaggga aattaataaa ctaaaatctg ccgatgaaat
    18601 taattttgca gatggaatgg gaaaatttac cgatagcatg aatgacaagg cttttagtag
    18661 gcttgtgaaa tcagttaaag agaatggctt cacaaatcca gttgtggagt acgttgaaat
    18721 aaatggaaaa gcatatatcg taagaggaaa taatagggtt tttgctgcag aataccttgg
    18781 caggatacat gaattaaaat ttaaaaaagt tgactttcct gttcctaata ctagttggaa
    18841 aaatcctact gatgtcttga atgaatcagg taatgttaag agacctcgtt ataggagtaa
    18901 ataaaaatgg caatttggaa ttatcggtac taccttatcc catcagctgc tatcagaaat
    18961 aaatttaatg caaataaaga tatcatactt gatgagtatc gatctaatgg ttttcagaat
    19021 tttaatgaga ataaaagttt tgaaaattac tttatcgata atgatgttat attattatca
    19081 ataataaatg aagcaaaaaa acagcttaaa ttgaaagaat cttgggataa agacgcaatc
    19141 atgttttgtg ataattttgg taatagtctt accgtttggc cagatgatat agagtgcgaa
    19201 cttgatttaa gatttgatta tactaaattt attcagaaaa ccattgattg ggcaataaaa
    19261 tataattgtc tacttgtaat agaaaaaaca ggaaatgtag tttcccctaa tataaataat
    19321 ctgatgtatg aaataaaagc atatttggaa agcaagccgt ggcccatatg aaacctaaac
    19381 tcaacaagta ggatgtgtgc ggaacgcacg tatgcggttc tcaaggtttg agctaagagg
    19441 ccgtctgaaa acagaaaaac tgtttcagac gacctttctt ttaaccagtt gccacagcaa
    19501 ccggacaaaa gcagcctacc tccacatcca tataggcaat acaggggaga tattttgtaa
    19561 attctacgaa tattttacct gctaaacagg gtaggatatg gtatgaagcg aacattggct
    19621 taataaacac tatgtcaaga tcgaatcagg ctggtactag attgttgtat tccaattatg
    19681 gattgctata tataacaact gatcattata tctctgcaac acggtttgta gcttggaaat
    19741 aggagtataa cttatgcaat tagagattat cggtagtaaa atttatacgg aacaagattt
    19801 tcataatcaa atttcaaaaa tattttctat acaagattat tatgggaaca atcttgatgc
    19861 tttatgggat ttattaagca caaatgtaga acgaccgatt actttggtat ggaaagatgc
    19921 tatgttctca aaaaatcaat tagaaaatat atttattgaa atcgtaaatg ttctagaaag
    19981 agttaagaaa caagatgagg attatggatt cgaagaaaaa tttaattata ttttagagta
    20041 agtaaaccct aattacatta cgtacacagg cttaaaactc cccagagcca attaagcaag
    20101 ccgtaaccca tataaaactt aaactcaaca agtagcatgt gtgcggaacg tacgcatgcg
    20161 gttcttaaag tttgagctaa gaggccgtct aaaaacagaa aaaccgtttc agacggtctt
    20221 tgtttaacgc caccgatcca gcgggttaca aagcgcagtc aatgccgctg cgccttatgc
    20281 ctccgaagca ataggcagaa catttggaca cggtgaaaac aaaaacgaaa ccgcccaagc
    20341 cgtcggacat ttccttttag gagcagctat tgcccgcgtc aacggtggta attttgctgc
    20401 cggcggctcg gcagcagttg cagctgaaaa ggcggcggaa catcttgccc aacagtataa
    20461 cgacggtaaa accgcaatcg atccgcaaac aggcgagttc aatgccaacc tgctgccgga
    20521 acatatcaaa gaggaaatca aatcaaagag cggggtgatt gcatcgctga cgggcgcggc
    20581 cgtgggcggc acgccggtag atgcgcaaac cggaggtgcg gtcggacaga atgcggtgga
    20641 aaacaacctc tatctgacat cggaagcctt aaagaaggac aagcagacag ctcgtaaaat
    20701 ttattccgtc ataaaagagc aagtcaagca tgaatgcagt tccacaggaa gaattaccga
    20761 atgtcgtcaa aatataggac gcattatcga atttacccaa gacaaacgct ttgacagtag
    20821 gtttaaggac ttaaaaaaag aatccttata ttacctaaat aaacatcctg atttagtagc
    20881 ctcttatttg aaggctgaat acgaaaagct ggatagggaa gacaaaagta tcctgcaccg
    20941 ctacatctca cccggggctg aaatcgtttc gggcagtttg ggggttgttc tttcaggagt
    21001 agccggaggc ggatcttgtg ccgagacttt cggcttaggc tgtgccgccg ctttggttgg
    21061 tgtaacgtct tcctacgatc atgtcattac tgggacgaaa aacttcggaa aaaaagccag
    21121 cgagcaacga ccgacgattg cggttcaggc cttgaagcag ttggggctgt cggagcaggc
    21181 tgcggaatat gttcagttct ctatagattt gttcagtgtg ggtaaatcgg ggggcggtat
    21241 acctaaggct aagcctgtgt ttgatgcgaa accgagatgg gaggttgata ggaagcttaa
    21301 taaattgaca actcgtgagc aggtggagaa aaatgttcag gaaacgagaa gaaggagtca
    21361 gagtagtcag tttaaagccc atgcgcaacg agaatgggaa aataaaacag ggttagattt
    21421 taatcatttt ataggtggtg atatcaataa gaaaggcaca gtaacaggag ggcatagtct
    21481 aacccgtggt gatgtacggg tgatacaaca aacctcggca cctgataaac atggggttta
    21541 tcaagcgaca gtggaaatta aaaagcctga tggaagttgg gaggtgaaaa cgaaaaaagg
    21601 tgggaaagtg atgaccaagc acaccatgtt cccaaaagat tgggatgagg ctagaattag
    21661 ggctgaagtt acttcggctt gggaaagtag aataatgctt aaggataata aatggcaggg
    21721 tacaagtaaa tcgggtatta aaatagaagg atttaccgaa cctaatagaa cagcatatcc
    21781 catttatgaa tagtaatatt tatgaaaaat taggagatta atgatgaaaa gaattaagtg
    21841 cttttgtgat aaatttccat caggagatac atttagaatg tgtatcattc tggatgacta
    21901 tgataatagg gttgattatt atgtaggaat atatgattac attacgtcta ccttaatgag
    21961 cgatatttac tatcgatcca cgattgatga gcatttcaag attatagaat taatagaaaa
    22021 taatccaaat gaaatttatg atgatggcgg tggtcaacaa ttttgcctag aatttcatca
    22081 tgataaggtc attttttatc acaatgaatt tgatgaagaa gatggttatc cagtattaag
    22141 ctgttcgctg catactttta aaactgcttt aattgcttgg aatgcttttt tgcaattgcc
    22201 taaaagtatt cattcggtgg tggagactgt gattgaggaa taagcataat tagcttaatg
    22261 aatagaatca gcgatataga aaggtagaat cagatatatc ccacctaaaa attactctcc
    22321 ttcagcaccg ctaccaaaag gacctaataa tggatatagt gccgggaatt taagcaaaaa
    22381 agtcctgact ttagtttaca taaacggcaa actcaaattc gggccaagca gtctgccgtc
    22441 ttcggcattg aaagcacctg ttcccattgt cggcaaggct gaggctccgc ccggaaaagc
    22501 tgtgcctgtc ggcgaagccc gcattccttc aaatccaaaa gcggtaaaag gaacaaccgt
    22561 taccctgtcg caggaacaac gcctagccaa cggagagctg ataccgaaag gctctgtggt
    22621 aacgtggtcg gacaatgcgg tgaaggttgt gcggcctgat gggaaaaagc ggagatttaa
    22681 tagtcgggat tgggaacaga aggcattgcc gaaaccgcaa ctaccgaaag attacagaga
    22741 tgacatcaac ataggtggaa ataatcctag atttaatcag caacggcatg aaaaaatcga
    22801 atcccacaac ccaaacagaa tagaggagat acgccaacgt aatgccgttt cttctgcaga
    22861 aaggcaggct gatgcattaa aaaggatgca aacgtctggc cgcacccgcc tgcctgggca
    22921 gccacaaaaa ggaaaacccg gcgctgctag agaaatgtcc tcttcagaca atccgaatca
    22981 aacagccgag gcttttgcac gtcgatattt aggcaggaaa cctacactaa tggaacgagt
    23041 cgaaggtgaa aaattatacg gaggtaaatg tgtgggctgt tggaaagcgc aaatgccgga
    23101 cggaaccttt gtggtgtata ggccagcagg taatgcttct atgaccaagg gaactactgc
    23161 gtctgttgat attaataacc caacattaaa taacttaaat attaatttaa aaggcaagcc
    23221 aacagagtta aaatttaaat tccctgctag ataaggatgt tttaatgaat ttagagacag
    23281 cagaaaatat tcaatgcgaa tttgagtatt tagcattaga tggttatttt ccaatgcatt
    23341 ttgcatcgca tggtcaagga aacaaagatt ggcaatttgc agttgaattc atatatagat
    23401 tattaatatg tcaattagca actcttgaac ctatcaactt tgaaacgaaa aatgatattt
    23461 tagacttttg ccataattta gcaaaacaaa gtccttttaa taatgataat gaggtgtggt
    23521 atcaggggga aattgtatta acaaaaaaag ggatagattt aataaaggaa tatattccag
    23581 aggcgtttga agagtggaat ggaaagaaat ttgaattaaa cattcctttc attaaaacat
    23641 taaaaaatat atttgttaat tatgaggtag catgggatga gaataatcca ctattcccca
    23701 ttatatcttt aaacctcggc acctgataaa catggggttt atcaagcgac agtggaaatt
    23761 aaaaagcctg atggaagttg ggaaatgaaa aaaggaaggg gcggaaaacc tatgacaaat
    23821 cattctatgt tcccaaaaga ttgggatgag gctagaatta gggctgaagt tacttcggct
    23881 tgggagaaaa gaaaggaatt agaaggtcaa aaatggagag gtacaagtaa atctggtgtt
    23941 gaaatagaag gatttacgga acctaatcga acagcttatc cactttataa tagtaaatga
    24001 agtattgatt aaaaaggtgt ttttaaatgt ataaaataaa atgtttttat gatcagttta
    24061 gttctggtga attatttaac tactgccagt ttttagataa ttcttctaat caaaagataa
    24121 atacacgagg aacggtgtat caatatatta tttatgtttt aacaggagac ctttatctac
    24181 aaaaagacat agatgaaaat ttagaattta tccatcaagc agaaaataat cccaatgaag
    24241 tttattcagg aggtggacaa ggtttttgct gggatatttc tgctgaaaaa gtagttttct
    24301 atcacaacga atttgatgaa gaagacggct ggcctgattt aagctgttcg ctgcatactt
    24361 ttaaaactgc tttaattgct tggaatgctt ttttgcaatt gcctaaaagt attcattcgg
    24421 tggtggagac tgtgattgag gaataagcat aattagctta atgaatagaa tcagcgatat
    24481 agattggact gcaaatccac gcttatacgc tgtgccatga ttaacaggaa gagagcaact
    24541 tggatgggct agtagggatg gtaagcattt aaatatatca attgatggaa agattacaca
    24601 caaatgacta atttaaaatt agatttctac tctgaagtta ttataaaaga ttcttgccct
    24661 aatgatttgt tagaaaatgg tgagactatt aaaggaaaaa aaggagtggt attaggtata
    24721 agcgaagaag atggtataat ctatggctat actattttac tttttgatat aaaatattgt
    24781 atatatagat aagaaatata ttataccgac tggaaaaaaa ttctctcgcg atgattttta
    24841 ttagctaatt taagtaattt aagcaagttt tttagatact gaaactggta attatgttta
    24901 tgtaagcata aggagttcag attgaaggat tctacagggc aaatgaggct ggcaaccaag
    24961 gatttggcgg aagccattaa acgaggagaa gtacgtagtt ctgcttttac aacaaagcaa
    25021 ctaaaggcaa tcgaaaaagg agaatctaaa ataccggatt acacttggca tcatcatcaa
    25081 gacactggaa ggatgcaatt gattaatgaa gacttgcatc atgataccgg ccatatcggt
    25141 tggagagcga tgagtaaagg aaagtaacta tgtggaaaat cataaaagag gatagtgatg
    25201 atttaggatt tgcaattaaa tgcttattct ctcaatctat tgatttaaat gaattcaagt
    25261 tatggattga acaagtaata cgagatatgc ccattgagga catccctttt tatatttttg
    25321 acttggcgga tttcgatgta ggaattggcg atattggcaa tattgtaggt tttgctccga
    25381 gttccagcct gccgaaatcg aaaaaaaatg ccttgaccgg cattgccttc ttaaggggga
    25441 tagatgtcta tgaccctccc gtttcaaaag aaaaagcatt aaaagcctta gagaaatatc
    25501 ctgaaattta tcagaaattt cagcatttct ttccgtttgt agagctgcct ccgctttaaa
    25561 cagtcaaaat gccgtctgaa acaatattcg gctttcagac ggcatttttg acacaaagca
    25621 ggtaaccaaa ggagtgtttg acggaaaagg agaagctaaa ataccgagct atacttggca
    25681 tcatcatcag gatacgggac gaatgcagtt aatatccgaa agaaagcata cgcaaacagg
    25741 gcatataggt ggtgaagcaa tggataaagg aaaatgatta tgttggggct tacacggaac
    25801 aattgtgatg atttgggatt tgctatattg tgttatgagc gcaatgcagc cgacaaaaaa
    25861 gaattcttgg attggttata tgaaattgtc aggactgtcc ctgccgaaag ttttccaagg
    25921 tatctgattg atttaataga ttgtttggaa tcagatgatt gttccataaa tatatataat
    25981 attattggct ttgttccaac taccggtatg acgaaaaagg aaaaagatgc cgtatatggc
    26041 attacctata tacggaatca agagttttac gatattccga ttactaggga gaaggcgtta
    26101 aaagccttaa aaaaacatcc tgaaatttat cagaagtttc ggcatttctt tccgtttgta
    26161 gaactgcccc cgctttaaac agtcaaaatg ccgtctgaaa cgatattcgg ctttcagacg
    26221 gcatttttga cacaaagcag gtaaccaaaa gagcgtttga cggcaaagga agataattat
    26281 gtggaaaatc ataaaagagg atagtgatga tttaggattt gcaattaaat gcttattctc
    26341 tcaatctatt gatttaaatg aattcaagtt atggattgaa caagtaatac gagatatgcc
    26401 cattgaggac atcccttttt atatttttga cttggcggat ttcgatgtag gaattggcga
    26461 tattggcaat attgtaggtt ttgctccgag ttccagcctg ccgaaatcga aaaaaaatgc
    26521 cttgaccggc attgccttct taagggggat agatgtctat gaccctcccg tttcaaaaga
    26581 aaaagcatta aaagccttag agaaatatcc tgaaatttat cagaaatttc agcatttctt
    26641 tccgtttgta gagctgcctc cgctttaaac agtcaaaatg ccgtctgaaa caatattcgg
    26701 ctttcagacg gcatttttga tacaaagcag gtaaccaaaa gagcgtttga cggcaaagga
    26761 agataattat gtggaaaatt acgaaagagc aaggtcaaga tttaagtttt gcaacatatt
    26821 gcttattatc ggcagcaatt aatttgcaag aatttaaatt atggttggag aaggttgtct
    26881 tagatatgcc tattgataat atacattttt atatttttga tttaattgat cttaaagaag
    26941 gagtaggaga tatttataat attttggatt ttgttccgaa ttcagactta tctaaagacc
    27001 aagatgacgc attaacaggc attgccttct taaggggtat agatgtctat gaccctcccg
    27061 tttcaaaaga aaaagcatta aaagccttaa agaaacatcc tgaaatttat cagaggtttc
    27121 agcatttctt tccgtttgta gaactgcccc cgctttaaac agtcaaaatg ccgtctgaaa
    27181 gaccgttccg ccgttcagac ggcattttcg ccccttttgt ttacaaaccc ttaaaatccc
    27241 tttacactca aaatccgttc aacatcaaac aaaccccgct atgaaaaccc tgctcctcct
    27301 catccccctc gtcctaaccg cctgcggcac actgaccggc atacccgccc acggcggcgg
    27361 caaacgcttt gccgtcgaac aggaactcgt cgccgcatcg tcccgcgccg ccgtcaaaga
    27421 aatgga
//
LOCUS       DAWITQ010000009        26444 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.009, whole genome shotgun sequence.
ACCESSION   DAWITQ010000009 DAWITQ010000000
VERSION     DAWITQ010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 26444)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26444)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26444
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.009"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(92..880)
                     /locus_tag="WIX18_000361"
     CDS             complement(92..880)
                     /locus_tag="WIX18_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEZ5237518.1"
                     /translation="MNPQDKCWQVHRHLAEHADQRLTLVRNAPKHILLAGADADISRS
                     LLAKRYPQAVFEEYDSRADFLAAAAAVRKGGFWQRFTGKGVVQHCQSPTAPLPEACAD
                     MLWSNLGLLAAEQILPVLHNWARALETDGLLFFTCFGRDTFTELKCRLKENGIESRSV
                     MFPDMHDLGDMLAENGFYDPVTDTAKLVLDYKKAETFWADMDTLGVWRAMSWNDENAA
                     RSCVGTIFEREGGLSITLETVYGHAVKKLMLPQGENVVQFFPKR"
     gene            complement(882..1796)
                     /gene="bioH"
                     /locus_tag="WIX18_000362"
     CDS             complement(882..1796)
                     /gene="bioH"
                     /locus_tag="WIX18_000362"
                     /EC_number="3.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HEZ5237519.1"
                     /translation="MCLKHRGQLFAASVRYAAKSSRQPAQMPSETPDEPWHNTQRLIV
                     GASAMRRQRERKSMPDAVKKVYLIHGWGANRHMFDDLMPRLPATWPVSAVDLPGHGDA
                     PFAQPFDIEAAADAVAAQIDTPADILGWSLGGLVALYLAARHPDKVRSLCLTASFARL
                     TADEDYPEGLAAPALGKMVGAFRSDYAKHIKQFLQLQLLHTPDADGIIGRILPDLARC
                     GTPSALQEALDAAERADARHLLDKIDVPVLLVFGSKDAITPPRMGEYLHRRLKGSRLV
                     VMEKAAHAPFLSHAEAFAALYRDFVEGV"
     gene            1741..2349
                     /locus_tag="WIX18_000363"
     CDS             1741..2349
                     /locus_tag="WIX18_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HEZ5237520.1"
                     /translation="MAAYRTDAANSCPLCFRHIQGGAVCGGCQKKPPAFDRMWASLHY
                     EPPVSNMIRTLKHLADLGMVRPLANLMVQNPPDRLADECFDFVLPVPLSRERLLQRGF
                     NQSESIVGLLAQRYGWQILPRHTVFRHHRPPQSTLKGSERRRNIKNAFEIRTPIPENC
                     NILLIDDVFTTGATLDELAKTLKKSGANRICCWTLARTPMKK"
     gene            2414..2878
                     /gene="trmL"
                     /locus_tag="WIX18_000364"
     CDS             2414..2878
                     /gene="trmL"
                     /locus_tag="WIX18_000364"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HEZ5237521.1"
                     /translation="MFTIVLYQPEIPPNTGNIIRLCANTGADLHLVKPLGFPLDSAKM
                     KRAGLDYHEFASLTVHENFDDCLKALAGRRIFALTTKGTARPDETAFQKGDVLLFGPE
                     TRGLPADILDSLPAAQKIRLPMQPGSRSMNLSNTVAVILFEAWRQHGYAGGV"
     gene            2889..3011
                     /locus_tag="WIX18_000365"
     CDS             2889..3011
                     /locus_tag="WIX18_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HEZ5237522.1"
                     /translation="MPSENLSGHIPNRRPHCTAVRNVSGGHDAHSSSTQERNTF"
     gene            3008..3727
                     /locus_tag="WIX18_000366"
     CDS             3008..3727
                     /locus_tag="WIX18_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HEZ5237523.1"
                     /translation="MTLTRKTLFLLTAAFGTHSLQTASADAVVKAEKLHASANRSYKV
                     AGKRYTPKNQVAEFTQTGNASWYGGRFHGRKTSGGERYDMNAFTAAHKTLPIPSYVRV
                     TNTKNGKSVIVRVNDRGPFHGNRIIDVSKAAAQKLGFVNQGTAHVKIEQIVPGQSAPV
                     AENKDIFIDLKSFGTEHEAQAYLNQAAQNFAASASSPNLAIEKRRYEYVVKMGPFASQ
                     ERAAEAEAQARGMVRAVLTAG"
     gene            3781..4107
                     /locus_tag="WIX18_000367"
     CDS             3781..4107
                     /locus_tag="WIX18_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEZ5237524.1"
                     /translation="MNFKRLLLTAAATALMGISAPALAHHDGHGDDDHGHAAHQHSKQ
                     DKIISRAQAEKAALARVGGKITDIDLEHDNGRPHYDVEIVKNGQEYKVVVDARTGRVI
                     SSRRDD"
     gene            4189..4773
                     /gene="ruvA"
                     /locus_tag="WIX18_000368"
     CDS             4189..4773
                     /gene="ruvA"
                     /locus_tag="WIX18_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HEZ5237525.1"
                     /translation="MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGES
                     VQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVGGIGAKTALGILSAMTADELAQAV
                     AEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDGLFAAAPAADETEDIVSTLLA
                     LGYSEREAKAAVKGVPEGTDVGEGVRLALKNLLK"
     gene            4773..4910
                     /locus_tag="WIX18_000369"
     CDS             4773..4910
                     /locus_tag="WIX18_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237526.1"
                     /translation="MPSEGGATFALTKPCVSASRCLPDGFSRKMALLSFLSDGIVFDA
                     V"
     gene            4936..6792
                     /locus_tag="WIX18_000370"
     CDS             4936..6792
                     /locus_tag="WIX18_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ5237527.1"
                     /translation="MLNKIFSWFESRIDPYPEAAPKTPEKGLWRFIWSNMAGVRKWIA
                     ALAALTAGIGIMEALVFQFMGKIVEWLGKYAPAELFAEKGWELAAMAAMMVFSVVWAF
                     AASNVRLQTLQGVFPMRLRWNFHRLMLNQSLGFYQDEFAGRVSAKVMQTALALRDAVM
                     TVADMVVYVSVYFITSGVILASLDSWLLLPFIGWIVGFASVMRLLIPKLGQTAAWQAD
                     ARSLMTGRITDAYSNIATVKLFSHGAREAAYAKQSMEEFMVTVRAQMRLATLLHSCSF
                     IVNTSLTLSTAALGIWLWHNGQVGVGAVATATAMALRVNGLSQYIMWESARLFENIGT
                     VGDGMATLSKPHTILDKPNALPLKVSQGEIKFEHVDFSYEAGKPLLNGFNLTIRPGEK
                     VGLIGRSGAGKSTIVNLLLRFYEPQSGTVSIDGQDISGVTQESLRAQIGLVTQDTSLL
                     HRSVRDNIIYGRPDATDAEMVSAAERAEAAGFIPELSDAKGRRGYDAHVGERGVKLSG
                     GQRQRIAIARVMLKDAPILLLDEATSALDSEVEAAIQESLDKMMDGKTVIAIAHRLST
                     IAAMDRLVVLDKGRIIEEGTHAELLEKRGLYAKLWAHQSGGFLNEHVEWQHD"
     gene            6797..7720
                     /gene="rsgA"
                     /locus_tag="WIX18_000371"
     CDS             6797..7720
                     /gene="rsgA"
                     /locus_tag="WIX18_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HEZ5237528.1"
                     /translation="MPSEHPFSDGISTPNPKETMNDTAQITASYGRRYIVRTPDGTTY
                     EASTRKKRVDFACGDRVRISPVNAEQVVIEDFLPRQSLLYRQDAWKTKLIAANVTQLL
                     IVTAAVPSPSMRLLQRALLAAEAAGIRAVIVLNKADLPETALWREKLKFYETLGYPVI
                     ETRALENAGSLRPALQGHSNILLGQSGMGKSTLTNALLGSQTARTGDISAALDSGKHT
                     TTHARLYDLNGETQLIDSPGLQEFGLHHLQAADLPRYFPDFRHLVGQCRFHNCTHRAE
                     PGCAFKAAAQTGAASPERLAFLQGITDELPG"
     gene            7981..8205
                     /locus_tag="WIX18_000372"
     CDS             7981..8205
                     /locus_tag="WIX18_000372"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEZ5237529.1"
                     /translation="MKKNAPKSFEEALSRLESLTQAMQGEMPLEDALAAYQEGNELVR
                     YCQTKLAQVEQKLQVLDADGPKELNLESDE"
     gene            8189..9085
                     /locus_tag="WIX18_000373"
     CDS             8189..9085
                     /locus_tag="WIX18_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEZ5237530.1"
                     /translation="MNPTNDLKAWQQRAQAQTELLLERFLPSENEIPHTLHEAMRYAV
                     LDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGK
                     PTCHIKYGEATALLVGDALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQ
                     AIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLG
                     LAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKLMGLEAARSYAHKLVAEAVALL
                     EPFGDKALRLRQLAEFAVARKY"
     gene            complement(9194..9493)
                     /locus_tag="WIX18_000374"
     CDS             complement(9194..9493)
                     /locus_tag="WIX18_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2818 family protein"
                     /protein_id="HEZ5237531.1"
                     /translation="MTASMYILLVLALIFANAPFLTTRLFGVAALKRKHFGHHMIELA
                     AGFALTAILAYILESRAGSVHDQGWEFYATVVCLYLIFAFPCFVWRYFWHTRNRE"
     gene            complement(9605..11050)
                     /gene="nuoN"
                     /locus_tag="WIX18_000375"
     CDS             complement(9605..11050)
                     /gene="nuoN"
                     /locus_tag="WIX18_000375"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HEZ5237532.1"
                     /translation="MNWSDLNLMPAMPEIVLLALLVLLLLADLWVSDDKRRWTHYGAL
                     ATVAVTAVVQLAVWEQGSTSSFNGMYIADGMSRLAKMVLYALMFTLFVYAKPYNQVRG
                     IFKGEFYTLSLFALLGMGVMVSAGHFLTAYIGLELLSLALYALIALRRDSGFAAEAAL
                     KYFVLGALASGLLLYGISMVYGATGSLEFAGVLASSFNEEANEWLLKLGLVFIVVAVA
                     FKLGAVPFHMWVPDVYHGAPTSVTALVGTAPKIAAVVFAFRILVTGLGTVHHDWSLMF
                     ALLAAASLLVGNLAAIMQTNIKRMLAYSTVSHMGFILLAFMAGAVGFAAGLYYAITYA
                     LMAAAGFGVLMVLSDGDNECENISDLAGLNQHRVWLAFLMLLVMFSMAGIPPLMGFYA
                     KFGVIMALLKQGYVWLSVFAVVMSLIGAFYYLRVVKVMYFDESGRARPAAGGNNAAKF
                     LLSINALLLVLWGIMPQTVIDWCAKALENTL"
     gene            complement(11060..12556)
                     /locus_tag="WIX18_000376"
     CDS             complement(11060..12556)
                     /locus_tag="WIX18_000376"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HEZ5237533.1"
                     /translation="MFSNYLLSLAIWIPIAAGVLVLSTGKDSRAPLARVLAFMGALAG
                     FLVTLPLFTGFDRLSGGYQFTEFHEWIPLLKINYALGVDGISVLFIILNAFITLLVVL
                     AGWEVIQKRPAQYMAAFLMMSGLINGAFAAQDAILFYVFFEGMLIPLYLIIGVWGGPR
                     RVYASVKLFLYTLMGSLLMLVAMVYLYYQTGSFSIVDFQNIKQIPLGVQQLLFAAFFL
                     SFAVKVPMFPVHTWLPDAHVEAPTGGSMVLAAITLKLGAYGFLRFILPIMPDAARYFA
                     PVIIVLSLIAVIYIGMVALVQTDMKKLVAYSSISHMGFVTLGMFLFVNGQLNDWALKG
                     AIIQMISHGFVSAAMFMCIGVMYDRLHTRNIADYGGVVNVMPKFAAFMMLFGMANAGL
                     PATSGFVGEFMVIMGAVKVNFWVGALAAMTLIYGASYTLWMYKRVIFGAIHNPHVAEM
                     KDINCREFTILAVLAVAVLGMGLYPNAFIEVVHQAANDLIAHVAQSKI"
     gene            complement(12645..14681)
                     /gene="nuoL"
                     /locus_tag="WIX18_000377"
     CDS             complement(12645..14681)
                     /gene="nuoL"
                     /locus_tag="WIX18_000377"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEZ5237534.1"
                     /translation="MNDMTLYLIIALVPLAGSLIAGLFGNKIGRAGAHTVTILGVAVS
                     AVLSAYVLWGFLNGSRAKFDENVYTWLTMGGLDFSVGFLVDTMTAMMMVVVTGVSLMV
                     HIYTIGYMHDEKVGYQRFFSYISLFTFSMLMLIMSNNFIQLFFGWEAVGLVSYLLIGF
                     YFKRPSATFANLKAFLINRVGDFGFLLGIGLVLAYFGGSLRYQDVFAYLPNVQNATIQ
                     LFPGVEWSLITVTCLLLFVGAMGKSAQFPLHVWLPDSMEGPTPISALIHAATMVTAGL
                     FMVSRMSPIYEMSSTALSVIMVIGAITALFMGFLGVIQNDIKRVVAYSTLSQLGYMTV
                     ALGASAYSVAMFHVMTHAFFKALLFLAAGSAIIGMHHDQDMRHMGNLKKYMPITWLTM
                     LIGNLSLIGTPFFSGFYSKDSIIEAAKYSTLPGSGFAYFAVLASVFVTAFYAFRQYFM
                     VFHGEEKWRSLPEHHDDHHGDHHGEEHHSLGKNDNPHESPLVVTLPLILLAIPSVIIG
                     YVAIEPMLYGDFFKDVIFVNADAHPTMHIMKEEFHGALAMVSHSLHSPVLYLAIAGVL
                     SAWLLYVKLPHLPAKIAQTFRPIYVLFENKYYLDALYFNVFAKGTRALGTFFWKVGDT
                     AIIDNGIVNGSAKLVGAIAAQVRKAQTGFIYTYAAAMVFGVLVLLGMTFWGLFR"
     gene            complement(14730..15071)
                     /locus_tag="WIX18_000378"
     CDS             complement(14730..15071)
                     /locus_tag="WIX18_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237535.1"
                     /translation="MMDKNQLEQEFHKAMLNIYQEALNLPQPYKATRFLQIVNEFGGK
                     EAADKLLSTGEKKTQTGFTELILSGGGVHALKYSMEYLVLQKPWCDLFTEEQLAVARK
                     RLERVGFVFPK"
     gene            complement(15195..15770)
                     /locus_tag="WIX18_000379"
     CDS             complement(15195..15770)
                     /locus_tag="WIX18_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic/DOC family protein"
                     /protein_id="HEZ5237536.1"
                     /translation="MPSENPIGKTMKSIDEQSLHNARRLFESGDIDRIEVGTTAGLQQ
                     IHRYLFGGLYDFAGQIREDNISKGGFRFANAMYLKEALVKIEQMPERTFEEIIAKYVE
                     MNIAHPFLEGNGRSTRIWLDLVLKKNLKKIVNWQNVSKTLYLQAMERSPVNDLELRFL
                     LKDNLTDDVDNREIIFKGIEQSYYYEGYEKG"
     gene            complement(15804..16109)
                     /gene="nuoK"
                     /locus_tag="WIX18_000380"
     CDS             complement(15804..16109)
                     /gene="nuoK"
                     /locus_tag="WIX18_000380"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEZ5237537.1"
                     /translation="MITLTHYLVLGALLFGISAMGIFMNRKNVLVLLMSIELMLLAVN
                     FNFIAFSQHLGDTAGQIFVFFVLTVAAAESAIGLAIMVLVYRNRQTINVADLDELKG"
     gene            complement(16106..16777)
                     /locus_tag="WIX18_000381"
     CDS             complement(16106..16777)
                     /locus_tag="WIX18_000381"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEZ5237538.1"
                     /translation="MTFSAILFYILAAIVLYGAVRTVTAKNPVHAALHLVLTFCVSAM
                     LWMLMQAEFLGVTLVVVYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLL
                     AVALILILVNPKTDLAAFGLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMV
                     AAIALVYRKTTNPKRMDPADQVKVRADQGRMRLVKMEAVKPQVESAEESEVSDGLKPE
                     GEGKA"
     gene            complement(16789..17268)
                     /gene="nuoI"
                     /locus_tag="WIX18_000382"
     CDS             complement(16789..17268)
                     /gene="nuoI"
                     /locus_tag="WIX18_000382"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HEZ5237539.1"
                     /translation="MANLVKTFLLGELVKGMGVTLKNFFARKDTIYFPEEKTPQSVRF
                     RGLHAQRRYPNGEERCIACKLCEAVCPAMAINIESEEREDGTRRTKRYDIDLTKCIFC
                     GFCEEACPTDAIVETHIFEYHGEKKGDLHMTKPILLAIGDKYEAEIAKRKAADAPYR"
     gene            complement(17349..18425)
                     /gene="nuoH"
                     /locus_tag="WIX18_000383"
     CDS             complement(17349..18425)
                     /gene="nuoH"
                     /locus_tag="WIX18_000383"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HEZ5237540.1"
                     /translation="MQEWFQNLFAATLGLGDLGITVGLVVSVIVKIVIILIPLILTVA
                     YLTYFERKVIGFMQLRVGPNVTGPWGLIQPFADVFKLLFKEVTRPKLSNKALFYIGPI
                     MSLAPSFAAWAVIPFNEEWVLTNINIGLLYILMITSLSVYGVIIAGWASNSKYSFLGA
                     MRASAQSISYEIAMSAALVCVVMVSGSMNFSDIVAAQAKGIAGGSVFSWNWLPLFPIF
                     IVYLISAVAETNRAPFDVAEGESEIVAGHHVEYSGFAFALFFLAEYIFMILIAALTSL
                     MFLGGWLSPFPQSWGFIGTPSAFWMFVKMAAVLYWYLWIRATFPRYRYDQIMRLGWKV
                     LIPIGFAYIVILGVWMISPLNLWK"
     gene            complement(18428..20689)
                     /locus_tag="WIX18_000384"
     CDS             complement(18428..20689)
                     /locus_tag="WIX18_000384"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit G"
                     /protein_id="HEZ5237541.1"
                     /translation="MLQIEIDGKQVSVEQGATVIEAAHKLGTYIPHFCYHKKLSIAAN
                     CRMCLVNVEKAPKPLPACATPVTDGMIVRTHSAKAREAQEGVMEFLLINHPLDCPTCD
                     QGGECQLQDLAVGYGKTTSRYTEEKRSVVGKDMGPLVSAEEMSRCIHCTRCVRFTEEI
                     AGLQEIAMVNRGEHSEIMPFIGKTVETELSGNVIDLCPVGALTSKPFRFNARTWELNR
                     RKSVSAHDALGSNLIIQTKDHTVRRVLPLENEAINECWLSDRDRFAYEGLYHESRLKN
                     PKIKQGGEWMDVDWKTALEYVRSAIECIAKDGNQNQVGIWANPMNTVEELYLAKKLAN
                     GLGVKNFATRLRQQDKRLSDDLKGAQWLGQSIESLADNDAVLVVGANLRKEQPLLTAR
                     LRRAAKDRMALSVLAGSKEELFMPLLSQEAVHPDEWAGRLKNLSADAEHAVTASLKNA
                     EKAAVILGAEVQNHPDYAAIYAAVQELADATGAVLGILPQAANSVGADVLGVNSGESV
                     AEMANAPKQAVLLLNVEPEIDTVDGAKAVAALKQAKSVMAFTPFVSETLLDVCDVLLP
                     IAPFTETSGSFINMEGRLQSFHGVVQGFGDSRPMWKVLRVLGNLFDLQGFEYHDTAAI
                     LKDALDAESLPSKLNNRTASTQKDFQTTSSRLVRVGGVGIYHTDAIVRRSAPLQETSH
                     AAVPAARVNPNTLARLGLQDGQTAVAKQNGAGVSVVVKADAGLPENVVHLPLHTENAA
                     LGALMDTIELAGA"
     gene            complement(20979..21416)
                     /locus_tag="WIX18_000385"
     CDS             complement(20979..21416)
                     /locus_tag="WIX18_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237542.1"
                     /translation="MVEAKIFILYGAANKGKSTTLNTLFNQICRKFSKFLVFFERHGN
                     GLDFVAVFDHEGQRIGFYSSGDNEYEVRRNLYKLYSHNCDFIFGTSRTRGGSCDAVGC
                     YAELLHGDVNIINWCEKFEPTDEDNERAVKELFKSFKNIINKL"
     gene            complement(21416..22717)
                     /gene="nuoF"
                     /locus_tag="WIX18_000386"
     CDS             complement(21416..22717)
                     /gene="nuoF"
                     /locus_tag="WIX18_000386"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HEZ5237543.1"
                     /translation="MAIYQSGVIFDQVDTANPDCWTLDEYVKRGGYTALRKILSENIS
                     QTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGEKYVVCNTDEGEPGTFKDRDII
                     MFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALEQARAAGFLGKNILGS
                     DFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTET
                     FSSVSFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGTPFAEVLKMAGG
                     MRGGKKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVK
                     ALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGKMEDLDLLDSVGNQMAGRT
                     ICALADAAVFPVRSFTKHFRDEFVHYIEHGGPMKEHKWGGW"
     gene            complement(23107..23580)
                     /gene="nuoE"
                     /locus_tag="WIX18_000387"
     CDS             complement(23107..23580)
                     /gene="nuoE"
                     /locus_tag="WIX18_000387"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HEZ5237544.1"
                     /translation="MLSAESLKQIDIELAKYPADQRRSAIMGALRIAQTEKGWLAPET
                     IAFVADYIGISPAQAYEVATFYNMYDLEPVGKYKLTVCTNLPCALRGGMATGEYLKQK
                     LGISYGETTPDGKFTLVEGECMGACGDAPVMLLNNHKMCSFMTEEAIEKKLAELE"
     gene            complement(23580..24836)
                     /gene="nuoD"
                     /locus_tag="WIX18_000388"
     CDS             complement(23580..24836)
                     /gene="nuoD"
                     /locus_tag="WIX18_000388"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HEZ5237545.1"
                     /translation="MANKLRNYTINFGPQHPAAHGVLRMILELDGEQIVRADPHIGLL
                     HRGTEKLAETKTYLQALPYMDRLDYVSMMVNEQAYCLAVEKLAGIDVPIRAQYIRVMF
                     AEVTRILNHLMGIGSHAFDIGAMTAILYAFRDREELMDLYEAVSGARMHAAYFRPGGV
                     YRDLPDFMPKYEGSKFRNAKVLKQLNESREGTMLDFIDAFCERFPKNIDTLETLLTDN
                     RIWKQRTVGIGVVSPERAMQKGFTGVMLRGSGVEWDVRKTQPYEVYDKMDFDIPVGVN
                     GDCYDRYLCRMEEMRQSVRIIKQCSEWLRVNPGPVITTNHKFAPPKRTEMKTGMEDLI
                     HHFKLFTEGMHVPEGETYTAVEHPKGEFGVYIISDGANKPYRLKIRAPGFAHLQGMDE
                     MAKGHMLADVVAIIGTQDIVFGEVDR"
     gene            complement(24826..25419)
                     /locus_tag="WIX18_000389"
     CDS             complement(24826..25419)
                     /locus_tag="WIX18_000389"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEZ5237546.1"
                     /translation="MASIQNLYETVSRVLGNQAGKVISALGEITVECLPEHYISVMTA
                     LRDHEELHFELLVDLCGVDYSTYKNEVWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDD
                     FPVVESVVDIYNSADWYEREAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGY
                     VEMRYDEEQKRVIYQPVTIEPREITPRIVREENYGGQ"
     gene            complement(25432..25914)
                     /locus_tag="WIX18_000390"
     CDS             complement(25432..25914)
                     /locus_tag="WIX18_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HEZ5237547.1"
                     /translation="MGIEGVLKKGFITTSADTVLNYMRTGSLWPVTFGLACCAVEMMH
                     AGMARYDLDRFGIIFRPSPRQADLMIVAGTLTNKMAPALRRVYDQLAEPRWVLSMGSC
                     ANGGGYYHYSYSVVRGADRVVPVDVYVPGCPPTAEALIYGLIQLQQKIKRTSTIARDE
                     "
     gene            complement(25905..26261)
                     /locus_tag="WIX18_000391"
     CDS             complement(25905..26261)
                     /locus_tag="WIX18_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEZ5237548.1"
                     /translation="MLSAYFPVFVFILVGLAAGVLFILLGTILGPKRHYAEKDAPYEC
                     GFEAFENARMKFDVRYYLVAILFILFDLEVAFMLPWAVVFKDLGAYGFWSMLVFIVVL
                     TVGFVYEWKKGALEWE"
BASE COUNT         6578 a         7435 c         6720 g         5711 t
ORIGIN      
        1 cactatacat cggcatttcc tttagttctg tcggttttca caaacaaatg ccgtctgaaa
       61 cttggaaacg gcttcagacg gcatctgcac atcatctctt cggaaaaaac tgcaccacgt
      121 tctccccttg cggcagcatc agttttttaa cggcgtgtcc gtacactgtt tccagcgtaa
      181 tactcaaacc gccttcccgt tcaaatattg tcccgacaca cgaacgcgcg gcgttttcat
      241 cgttccacga catcgcccgc caaacgccca gcgtgtccat atccgcccaa aacgtttccg
      301 cctttttgta atccaacacc agcttcgccg tatcggtaac ggggtcgtaa aacccgtttt
      361 cagcaagcat atcgcccaag tcgtgcatat cgggaaacat cacgctgcgg ctttcaatgc
      421 cgttttcttt cagacggcat ttcagttcgg taaaagtgtc gcgcccgaag caggtaaaaa
      481 acagcagccc gtccgtctcc agcgcgcgcg cccagttgtg cagcacagga aggatttgtt
      541 ccgccgccaa cagtccgaga ttcgaccaca acatatcggc acacgcttcg ggcagcggcg
      601 cggtcgggga ttggcagtgt tgcaccacgc ccttacccgt aaacctttgc caaaaaccgc
      661 ccttgcgcac ggctgcggca gccgccaaaa aatccgcacg ggaatcgtat tcttcaaata
      721 ccgcctgcgg atatcgtttc gccagcaggc tgcggctgat gtccgcatcc gccccggcaa
      781 gcaggatatg tttgggcgcg ttgcggacga gtgtcagccg ttggtcggca tgttcggcaa
      841 gatggcggtg aacctgccag catttgtcct gcggattcat gtcaaacccc ttcgacaaag
      901 tcgcggtaca gcgcggcaaa cgcttccgca tggctcaaaa acggcgcgtg tgccgccttt
      961 tccatcacaa ccagcctgct gcctttcaaa cggcggtgca gatactcgcc catgcgcggc
     1021 ggcgtaatcg cgtctttgct accgaacacc agcagtaccg gaacatctat cttgtccaac
     1081 aaatgccgcg catccgccct ttccgccgcg tccaaagctt cctgtaaggc ggagggcgtg
     1141 ccgcagcgcg ccaaatcggg caggattctg cctatgattc cgtccgcatc aggcgtgtgc
     1201 agaagctgga gttgtagaaa ctgtttgata tgtttggcat aatccgaacg gaacgcgccg
     1261 accattttgc ccaatgcagg cgcggcaagc ccttcgggat agtcttcgtc agccgtcagt
     1321 cgggcgaaac tcgccgtcag gcagagcgaa cggactttgt cgggatggcg cgccgccaga
     1381 tacagcgcga ccaatccgcc gagcgaccag ccgagaatgt cggcgggcgt atcgatttgt
     1441 gcggcaacag cgtcggcggc tgcctcaata tcgaagggtt gcgcgaaggg cgcgtcgccg
     1501 tgtccgggca aatcgacggc ggacaccggc cacgttgcag gcaggcgcgg catcaaatcg
     1561 tcgaacatgt ggcggttcgc cccccaaccg tgtatcaggt aaactttttt gacggcatca
     1621 ggcatggatt ttctctctcg ttggcggcgc atcgcagacg cgcccactat caggcgttgc
     1681 gtattatgcc acggttcgtc cggcgtttca gacggcatct gcgccggctg ccgcgacgat
     1741 ttggcggcat accgcaccga cgcggcaaac agctgccccc tgtgtttcag gcacatccaa
     1801 ggcggcgcgg tgtgcggcgg ctgtcagaaa aaaccgcccg cattcgaccg gatgtgggct
     1861 tcgctgcatt acgaaccgcc cgtcagcaac atgatacgta cgctgaaaca cttggcagat
     1921 ttgggcatgg ttcgcccatt ggcaaacctg atggtacaaa acccgcccga ccggcttgca
     1981 gacgaatgtt tcgatttcgt cctgcccgta ccgctaagca gggagcggct gctgcaacgc
     2041 gggttcaacc aaagtgaaag catcgtcggg ttgttggcac aacgctacgg ctggcagata
     2101 ctgccccgac acaccgtatt ccgacaccac cgcccgccgc aaagcacgct caaaggcagc
     2161 gaacggcggc gaaacatcaa aaacgccttt gaaatccgca caccgatacc ggaaaactgt
     2221 aatattctgt taatcgacga tgtctttacc accggcgcga cgctggacga actggcaaag
     2281 acgctgaaaa aatcgggcgc gaaccgcatc tgctgctgga cgctggcacg cacgccaatg
     2341 aaaaaataac taaatttttt gacaccccat ccgccttgtg gcaaggttac gcgcctataa
     2401 gtgattgata tttatgttta ccatcgtttt ataccagccg gaaatcccgc cgaacacggg
     2461 caacatcatc cgcctgtgcg ccaataccgg cgcggatttg caccttgtca aaccgctcgg
     2521 cttcccattg gattccgcca aaatgaaacg cgccgggctc gactaccacg aattcgccag
     2581 cctgacggtg cacgaaaact tcgacgactg cctcaaggca ctcgcaggca ggcgcatttt
     2641 cgccctgacc accaaaggca cggcgcgccc cgatgaaacc gcgtttcaaa aaggcgacgt
     2701 tttactgttc gggccggaaa cgcgcggact gcctgccgac atcctcgaca gcctgcccgc
     2761 cgcgcaaaaa atccgcctgc ccatgcagcc cggcagtcgg agtatgaacc tttccaatac
     2821 cgttgccgtg attctctttg aagcgtggcg gcaacacggt tacgcaggcg gcgtttgaac
     2881 gcaagttcat gccgtctgaa aacctatccg gacacattcc gaaccgccgt ccgcactgta
     2941 cggcggttcg gaacgtatcc ggcgggcatg atgcccattc gtcttcaact caagaacgga
     3001 acacgttttg actttaaccc gaaaaaccct tttccttctc accgccgcat tcggcacaca
     3061 ctcccttcag acggcatccg ccgacgcagt ggtcaaggca gaaaaactgc acgcctccgc
     3121 caaccgcagc tacaaagtcg ccggaaaacg ctacacgccg aaaaaccaag tcgccgaatt
     3181 cacgcaaacc ggcaacgcct cgtggtacgg cggcaggttt cacgggcgca aaacttccgg
     3241 cggagaacga tacgatatga acgcctttac cgccgcccac aaaaccctgc ccatccccag
     3301 ctatgtgcgc gtaaccaata ccaaaaacgg caaaagcgtc atcgtccgcg tcaacgaccg
     3361 cggccccttc cacggcaacc gcatcatcga cgtatccaaa gccgccgcgc aaaaattggg
     3421 ctttgtcaac caagggacgg cgcacgtcaa aatcgaacaa atcgtcccgg gccaatccgc
     3481 accggttgcc gaaaacaaag acatcttcat cgacttgaaa tctttcggta cggaacacga
     3541 agcacaagcc tatctgaacc aagccgccca aaacttcgcc gcttcggcat caagcccgaa
     3601 cctcgccatt gaaaaacgcc gttacgaata cgtcgtcaaa atgggaccgt ttgcctcgca
     3661 ggaacgcgcc gccgaagccg aagctcaggc gcgcggtatg gttcgggcgg tattgactgc
     3721 cggttgatgt cccgccttta cgtctttcaa acaccaccag atacttcgca ggagcaaaac
     3781 atgaacttca aacgccttct cttgaccgcc gccgcaaccg cactgatggg catttccgcc
     3841 cccgcactcg cccaccacga cggacacggc gatgacgacc acggacacgc cgcacaccaa
     3901 cacagcaaac aagacaaaat catcagccgc gcccaagccg aaaaagcagc gttggcgcgt
     3961 gtcggcggca aaatcaccga catcgatctc gaacacgaca acggccgtcc gcactatgat
     4021 gtcgaaatcg tcaaaaacgg acaggaatac aaagtcgttg tcgatgcccg taccggccgc
     4081 gtgatttcct cccgccgcga cgactgaatt tgatacaatc cgtgccgtct gaagcccgaa
     4141 ccggtttcag acggcatttt gcacccgaca cttcaggatt cggcatacat gatcagcaga
     4201 ctgaccggca aactggttga aaaaaaccct ccgcaaatcg tcatcgatgt caacggtgtc
     4261 ggctatgagg ccgacgtatc gatgcagacc ttctacaacc tgccgcccgt gggtgaaagc
     4321 gtacaactgt ttacccagct tatcattcgg gaagacgcac atcttttatt tggttttgcc
     4381 actgcggaag aacgcaaaac attccgccaa ctgatcaagg tcggcggcat cggcgcgaaa
     4441 acggctttgg gcattttgtc ggcgatgacg gcagacgagc tggcgcaggc ggttgcagaa
     4501 gaagacgtga aacgcctgtc ttccgcgccg ggaatcggca aaaaaaccgc cgaacgtatg
     4561 gtcttggaac tgcgcggcaa gctggtcgcg catacggtaa cggacgggct gtttgccgcc
     4621 gcacccgccg ccgacgaaac ggaagacatc gtcagcacgc tgcttgcgct gggttacagc
     4681 gaacgcgaag caaaagcggc ggtcaaaggc gttccggagg ggacggacgt gggcgaaggc
     4741 gtgcgccttg ctttgaaaaa cctgctgaaa taatgccgtc tgaaggcggc gcgacgtttg
     4801 ccctgacgaa accctgcgtt tccgcctcgc gctgtcttcc cgacggcttt tcccgtaaaa
     4861 tggcgttatt gtccttcctt tcagacggca ttgtgtttga tgccgtctga aactgtttta
     4921 ccgaaatcga aaacaatgtt gaacaaaatc ttttcctggt tcgaatcccg aatcgacccc
     4981 tatcccgaag ccgccccgaa aacgcctgaa aaaggactgt ggcggtttat ctggagcaac
     5041 atggctgggg tgcggaaatg gatagccgcc ctggctgcgc tgaccgccgg catcggcatt
     5101 atggaagccc tggtttttca atttatgggc aaaatcgtgg agtggctcgg caaatacgcg
     5161 cccgccgaac tgtttgccga aaaaggttgg gaactggcgg caatggcggc gatgatggtg
     5221 ttttcggtcg tgtgggcgtt tgccgcgtcc aacgtgcgcc tgcaaaccct tcagggcgtg
     5281 ttccccatgc gcctgcgctg gaacttccac cgcctgatgc tgaaccaaag cctcggtttt
     5341 tatcaggacg aatttgccgg acgcgtgtcc gccaaagtca tgcagaccgc gctggcgttg
     5401 cgcgacgcgg tgatgacggt tgccgatatg gtcgtttatg tgtcggtgta tttcattacc
     5461 tccggcgtga ttctcgcctc gctcgactca tggctgctgc tgccctttat cggctggatt
     5521 gtcggtttcg cttcggtgat gcgcctgctg attcccaaat tggggcaaac cgccgcatgg
     5581 caggcggatg cccgctcgct gatgaccggc cgcattaccg atgcctattc caatatcgcc
     5641 accgtcaaac tcttctccca cggcgcgcgt gaagccgcct atgccaagca gtcgatggaa
     5701 gaatttatgg ttacggtgcg cgcccaaatg cggctggcga cgctgctgca ttcgtgcagc
     5761 ttcatcgtca acacctccct gaccctctcc accgccgcac tgggcatctg gctctggcac
     5821 aacgggcagg tcggcgtggg cgcggttgct acagccaccg ccatggcgtt gcgcgtcaac
     5881 ggtttgtcgc aatacattat gtgggaatcc gcgcggctgt ttgaaaacat cggcaccgtc
     5941 ggcgacggca tggcaaccct gtccaaaccg cacaccatcc tcgacaagcc gaacgccctg
     6001 ccgctgaaag tgtcgcaagg cgaaatcaag ttcgaacacg tcgatttctc ctacgaagcg
     6061 ggcaaaccgc tgctcaacgg cttcaacctc accatccgcc cgggcgaaaa agtcggcttg
     6121 atcggacgca gcggcgcggg caaatccacc atcgtcaacc tgcttttgcg cttctacgaa
     6181 ccgcaaagcg gcacggtttc gatcgacggg caggacataa gcggcgttac ccaagaatct
     6241 ttacgcgccc aaatcggttt ggtcacgcaa gatacctcgc tgctgcaccg ttccgtgcgc
     6301 gacaacatta tttacggccg ccccgacgcg accgatgccg aaatggtttc cgccgccgaa
     6361 cgcgccgaag ccgccggctt catccccgaa ctttccgatg ccaaagggcg gcgcggctat
     6421 gacgcgcacg tcggcgaacg cggcgtgaaa ctctccggcg ggcaacgcca gcgcatcgcc
     6481 attgcccgcg tgatgctcaa agacgcgccc atcctgctgc tcgacgaagc caccagcgcg
     6541 ctcgattccg aagtcgaagc cgccatccag gaaagcctcg acaaaatgat ggacggcaaa
     6601 accgtcatcg ccatcgccca ccgcctctcc accatcgccg caatggacag gctcgtcgtc
     6661 ctcgacaaag gccgcatcat cgaagaaggc acacacgccg aactcctcga aaaacgcggg
     6721 ctttacgcca aactctgggc gcaccagagc ggcggcttcc tcaacgaaca cgtcgagtgg
     6781 cagcacgact gaaccgatgc cgtccgaaca cccgttttca gacggcattt ccacacccaa
     6841 ccccaaagaa accatgaacg acaccgccca aattaccgcc agctacggcc gccgctacat
     6901 tgtccgcacg cccgacggca caacctacga agccagcacc cgcaaaaaac gcgtcgattt
     6961 cgcctgcggc gaccgcgtcc gcatcagccc cgtcaacgcc gaacaagttg tgattgaaga
     7021 ttttttaccg cgccaaagcc tgctctaccg ccaagacgcg tggaaaacca aactcatcgc
     7081 cgccaacgtt acccaactcc tcatcgtaac cgccgccgtc ccgagtccga gcatgcggct
     7141 gctacaacgc gccctgcttg ccgccgaagc cgccggcatc cgcgccgtca tcgtcctgaa
     7201 caaagccgac ctgcccgaaa ccgccctttg gcgcgaaaaa ctcaaattct acgaaacgct
     7261 gggttatccc gtcatcgaaa cccgcgcact ggaaaacgcc ggcagcctgc gccccgccct
     7321 gcaagggcac agcaacatcc tgctcgggca gagcggtatg ggcaaatcca ccctgaccaa
     7381 cgcccttttg ggcagccaaa ccgcccgcac cggcgacatt tccgccgcac tcgactcggg
     7441 aaaacacacc accacccacg cccggcttta tgatttgaac ggcgaaaccc aactcatcga
     7501 ctccccgggt ttgcaagaat ttggtttaca ccacctccaa gccgccgatt tgccgcgcta
     7561 tttccccgat ttccgccacc ttgtcgggca atgccgcttc cacaactgca cccaccgcgc
     7621 cgaacccggc tgcgccttca aagccgccgc gcaaaccggg gcggcaagcc ccgaacgcct
     7681 cgcctttttg cagggcatca ccgacgaact gcccgggtaa cgccttgccg cctgggcgga
     7741 aaaatgccgt ctgaagccgg attcgggttt cagacggcat ccgtttttca aaaatgctac
     7801 aatccgcttt ttactggaac atccgaaact atgttccaac acgcaggacg acacttaaag
     7861 caccgcccta tgtgtcgtcc tgatttggaa gggcttacac ccctcccaaa taaagtctga
     7921 ttctaccgcc ccgaaggaca gatgtccaag tggcggggtt tcaaccgaaa aggaaacacg
     7981 atgaagaaaa acgccccgaa atcgtttgaa gaagccttgt cgcgccttga atcgctgaca
     8041 caagctatgc agggcgaaat gcccttggaa gacgcgcttg ccgcctatca ggaaggcaac
     8101 gagctggtca gatactgcca aaccaagctg gcgcaagtcg aacagaaatt acaggttttg
     8161 gacgcggacg ggccgaagga gttgaacctt gaatccgacg aatgatttga aagcgtggca
     8221 acagagggcg caggcgcaaa cagagctgct gctggaacgc tttttgccgt ctgaaaacga
     8281 aataccgcac acactgcacg aagccatgcg ttatgcggtt ttggatgggg gcaaacgtct
     8341 gcggccgatg ctggttctgg cagcttcgga attaggcgaa gccgtgcatg aagcagtaga
     8401 acaggcaatg gcggcaatcg aaatgatcca tgcctattcg ttggttcacg acgatatgcc
     8461 ggcaatggac aacgacagcc tgcgtcgggg caaaccgacc tgccacatca aatatggcga
     8521 agccaccgcg ctactggtcg gcgacgcttt gcaaacccaa gccttcgacg tgttaagccg
     8581 tccgacagaa ctgcccgcag cacgccagtt ggcaatgttg tcggtgttgg cgaaagcggg
     8641 cggcagcgcg ggcatggcgg gcggtcaggc aatcgatttg gcgaatgtcg gcaaacaaat
     8701 ggttcaagcc gatttggaac agatgcacag cctgaaaacg ggtgcgctaa tccgtgcggc
     8761 ggttttattg ggggcgatgt cctgcccgaa tctgtctgaa gacagtctgg cggtattgga
     8821 cgattatgcg gcaaaactgg ggctggcgtt ccaagtcatt gacgatgtgt tggattgtga
     8881 agcggacacg gcgactttgg gcaagacggc gggcaaagat gcagacaacg acaagccgac
     8941 ttatgtgaaa ctgatgggct tggaagcggc gcgctcatac gcacacaaac tggttgccga
     9001 agcggtcgcg ctgctcgaac ccttcggcga caaagccctg cgcctgcggc agttggcaga
     9061 atttgcagtc gcccgcaaat attaaaaccg gcgtatatcg ccggctgaaa cgtgccggca
     9121 cagcgatgcc ggcctgcact tgaatgaaac aaatgccgtc tgaacaggtt tcagacggca
     9181 tttctatgct tgtctattcc ctgttgcgcg tgtgccaaaa ataccgccac acaaaacatg
     9241 gaaacgcaaa aatcaggtac aggcagacga ctgtggcata aaactcccaa ccctgatcgt
     9301 gtaccgatcc tgcacgggat tcgagaatat aggcaagaat ggcggtcagt gcgaaacctg
     9361 ccgccagctc gatcatgtgg tgtccgaaat gtttgcgctt gagcgcggcc acgccgaaca
     9421 gtctggtggt gaggaagggg gcgttggcaa agatgagtgc caagaccaaa aggatgtaca
     9481 tggatgcggt catggtgggc tttctgtttg ggcattgtcg gcggcgatgc cgtctgaact
     9541 gcattgcgga acggcatatc ttaacaaaaa cggcagcctc tgacacggct gccgttgcgg
     9601 cggcttacag cgtgttctcc aacgccttgg cgcaccagtc gataacggtt tgcggcataa
     9661 tgccccacag caccaacagc agcgcgttga tgcttaagag gaattttgcg gcattgttgc
     9721 cgccggcggc gggacgggcg cggccggatt cgtcaaaata catgactttg accacgcgca
     9781 ggtagtagaa cgcgccaatc agcgacatca cgacggcaaa tacggacaac caaacatagc
     9841 cttgttttaa gagtgccata atcacgccga atttggcgta aaagcccatc agcggcggaa
     9901 tgcccgccat agagaacata accagcagca tcaaaaaggc aagccatacg cggtgttggt
     9961 tcaaccctgc caaatcgctg atgttttcgc actcgttgtc cccgtccgac aacaccatca
    10021 acacaccgaa ccctgccgcc gccatcagcg cgtaggtaat ggcgtaatag agacccgccg
    10081 caaagccgac cgcgcccgcc ataaacgcca gcaggataaa ccccatatgc gatacggtgg
    10141 aataggcgag catacgtttg atattggtct gcatgatggc ggcaaggttg ccgaccagca
    10201 gcgaggcggc ggcaagcagg gcaaacatca gagaccagtc atgatgcacg gttcccaacc
    10261 cggtaacgag gatgcggaaa gcgaaaacaa cggcggcgat tttcggggca gtgccgacca
    10321 gggcggtaac agaagtgggc gcgccgtgat acacgtcggg cacccacata tggaacggca
    10381 ccgcgccgag tttgaacgca acggcgacga cgataaacac cagacccagt ttcaacagcc
    10441 attcgtttgc ttcttcattg aaggaagagg cgagcacgcc ggcaaattcc agcgaaccgg
    10501 ttgcgccgta aaccatagaa ataccgtaga gcagcaggcc ggatgccagc gcacccagaa
    10561 caaaatattt caaggcggct tcggcggcaa agccggaatc gcggcgcagg gcaatcaggg
    10621 cgtaaagggc aagcgacaag agttccaaac cgatataggc agttaaaaaa tgccccgcgc
    10681 tcaccatcac gcccataccc aagagggcaa acagcgacag ggtgtaaaac tcgcctttga
    10741 aaataccgcg cacttggttg tagggcttgg catagacaaa cagggtaaac atcaaggcat
    10801 ataaaaccat ttttgccaaa cgcgacatac cgtctgcaat atacatcccg ttgaacgaag
    10861 acgtgctgcc ctgttcccac accgccaact gcaccacagc cgtaaccgcc accgttgcca
    10921 acgcgccgta atgcgtccac cggcgtttgt catcactgac ccacaagtcc gccagcaaca
    10981 ataacaccag cagcgcaagc agcacgattt cgggcatggc gggcattaaa ttcaaatcag
    11041 accagttcat ttacacacct caaatcttgc tttgtgccac atgggcaatc aaatcgtttg
    11101 ccgcctgatg caccacttcg ataaatgcgt tcggatacag gcccataccc aataccgcaa
    11161 ccgccaaaac cgccagaatc gtaaactcgc gacagttgat gtctttcatt tcggcaacgt
    11221 gcggattgtg aatcgcgccg aaaatcacgc gcttgtacat ccacagggta taagacgcac
    11281 cgtaaatcag cgtcatagcc gccaacgcgc ccacccagaa attcacttta accgcgccca
    11341 taatcaccat aaactcgccc acgaagccag aagtcgccgg cagaccggca ttggccatac
    11401 cgaacaacat cataaacgcc gcaaacttag gcatcacatt gaccacgccg ccataatcgg
    11461 caatattgcg ggtatgcagg cggtcgtaca tcacgccgat acacataaac atcgcggcag
    11521 acacaaaacc gtgggaaatc atttgaatga ttgcgccttt caatgcccaa tcattcaatt
    11581 ggccgttcac aaacaggaac atacccaaag tgacaaaacc catatggctg atggacgaat
    11641 acgccaccag ttttttcata tcggtttgca ccaaagccac cataccgatg taaatcacgg
    11701 caatcaggct caatacaatg atcacagggg caaaatagcg tgccgcatcc ggcataatcg
    11761 gcaggataaa gcgcaagaaa ccatacgcac ccagcttcag cgtaatcgcc gccaacacca
    11821 tcgaaccgcc ggtcggcgct tcaacgtggg catccggcaa ccaagtgtgc acagggaaca
    11881 tcggcacttt tacggcaaat gacaggaaga acgctgcaaa taaaagctgt tgtacgccca
    11941 acggaatctg tttgatgttt tggaaatcga caatagagaa gctgcctgtt tgatagtaca
    12001 ggtaaaccat agcaaccagc atcaggagcg aacccatcag cgtatagagg aacagcttga
    12061 ccgacgcata gacgcggcgc gggccgcccc atacaccgat aatcaggtac agcggaatca
    12121 gcataccctc gaagaacaca taaaacagaa tcgcatcctg cgcggcaaac gcaccgttaa
    12181 tcaaacccga catcatcagg aatgccgcca tatactgcgc cgggcgtttc tgaataactt
    12241 cccaaccggc caataccacc agcagcgtaa taaacgcatt caagatgata aagagcactg
    12301 aaataccgtc cacgcccaat gcgtagttga ttttcagaag cggaatccac tcgtggaact
    12361 cggtaaattg atagccgccg ctcaaacggt cgaaaccggt aaacaggggc agcgttacca
    12421 agaaaccggc aagcgcaccc ataaaggcaa gcacacgcgc cagcggcgca cggctgtcct
    12481 taccggtcga caaaaccagc acacctgcgg cgatgggtat ccatattgcc aagctgagta
    12541 ggtagttgga aaacatagtg gttaacctgt ggttaaaata aaaatatcgt tgtacgggtt
    12601 ggtttgtcag acgacgtttt aagagaccgt ctgaaacctc atccttatct gaacaatccc
    12661 cagaaggtca taccgagcaa gaccaatacg ccgaacacca tagcggcggc gtaggtatag
    12721 ataaagccgg tttgagcttt acgcacttgc gcggcaatcg cgccgaccag tttggcagag
    12781 ccgttgacga tgccgttgtc gataatggcg gtatcgccga ctttccagaa gaaagtaccc
    12841 aatgcgcgtg tgcctttggc gaaaacgttg aaatacaggg cgtcgaggta gtatttgttt
    12901 tcaaacaaaa cgtaaatcgg acggaacgtc tgtgcaattt tcgctggcag gtgcggcagt
    12961 ttgacgtaca aaagccatgc gctcaacacg cctgcgatag caaggtagag tacaggcgaa
    13021 tgcaggctgt gcgacaccat tgccaatgcg ccgtggaact cttccttcat gatgtgcatg
    13081 gtcggatgcg cgtcggcgtt gacgaaaatc acatctttga agaaatcgcc gtaaagcata
    13141 ggctcgatgg caacgtagcc gatgatgacg gacggaatgg caagcaaaat caaaggcagg
    13201 gtaacaacca acgggctttc gtgcggattg tcgtttttgc ccaagctgtg atgttcttcg
    13261 ccatgatgat cgccatgatg atcgtcatga tgttcaggca agctgcgcca tttctcttcg
    13321 ccgtggaaca ccataaagta ttggcggaac gcgtagaacg cggtaacgaa cacgctggca
    13381 aggacggcaa aataggcaaa gccgctgccc ggcagggtgc tgtatttcgc cgcttcgata
    13441 atcgaatctt tagaatagaa gccggagaag aacggcgtac cgatcagcga caagttaccg
    13501 atcagcatgg tcagccaagt aatcggcatg tattttttca ggttgcccat gtggcgcatg
    13561 tcttggtcgt ggtgcatacc gataatcgcg ctgcctgccg ccaagaacaa caaggcttta
    13621 aagaaagcgt gggtcatcac atggaacatc gccacggaat aggcagacgc acccaaagcc
    13681 acggtcatat agcccagttg cgacaaggtg gaatacgcaa ccacacgttt gatgtcgttt
    13741 tgaatcacgc ccaagaaacc cataaacagg gcggtaatcg caccgatcac cataatgaca
    13801 gacagcgcag tgctgctcat ctcataaatc ggcgacatac gcgataccat aaacagaccg
    13861 gcggtaacca tcgtcgcagc gtgaatcaat gcagaaatcg gggtcgggcc ttccatcgaa
    13921 tcaggcagcc aaacgtgcag tgggaattgt gccgatttac ccatcgcacc gacaaacagg
    13981 agcaaacagg tgacagtaat caacgaccat tccacaccgg ggaaaagctg gatggtggca
    14041 ttttgcacgt tgggcagata agcgaataca tcttgatagc gcaggctgcc gccgaaatag
    14101 gcaagcacca agccgatacc gagcaaaaag ccgaagtcgc cgacacggtt gatcaaaaag
    14161 gctttcaggt tggcaaatgt tgcgcttgga cgtttgaaat agaaaccgat caagagatac
    14221 gacaccaagc ccacagcctc ccagccgaag aagagctgga tgaagttgtt gctcataatc
    14281 agcatcaaca tgctgaaagt aaacaaagaa atatagctga agaagcgttg gtagccgact
    14341 ttttcatcgt gcatatagcc gatggtgtag atatgcacca tcaacgatac gcccgttacc
    14401 acgaccatca tcatcgccgt catcgtatcg accaagaagc cgacggagaa atccaaaccg
    14461 cccatcgtca gccaggtata gacgttctca tcaaacttgg cacggctgcc attgaggaat
    14521 ccccacagca cataagccga cagcacggca gacaccgcca caccgagtat cgtaacagta
    14581 tgcgcaccgg cacgaccgat tttgttgccg aacaaacccg caatcaacga gcctgccaac
    14641 ggaacaaggg caattatcaa atataaagtc atgtcgttca tttgattgaa tccgattgat
    14701 ttaaaaatct atgtttgttt cgtacaaaat tacttcggaa aaacaaatcc aacacgctcc
    14761 aatcgtttgc gtgccacagc taattgctct tcagtaaata aatcacacca cggcttttgt
    14821 aacaccagat attccatact gtatttcaag gcgtggactc cgccaccact cagaatcagc
    14881 tctgtaaaac cggtctgagt cttcttttcc cccgtactta ataatttatc cgccgcctct
    14941 ttaccaccaa attcatttac aatttgtaaa aatcgtgtcg ccttgtaagg ttgcggcaaa
    15001 ttcaaagcct cctgataaat atttaacatg gctttatgaa attcttgttc taactgattt
    15061 ttatccatca ttcttcttcc aatatttcag accggattat tcttacccag aatttctttt
    15121 ctcatccgct cccgtctgat cacctaccga atcaggtcgt ctgaaacagt ctgaaatcgc
    15181 ttttcagacg accctcagcc tttttcatac ccttcgtaat aatacgactg ctcgatacct
    15241 ttaaagatga tttcacggtt gtccacatcg tcggtcaggt tgtcctttaa cagaaagcgc
    15301 agttctaaat cgttgacggg gctgcgttcc atcgcctgca aatacagggt tttgcttaca
    15361 ttttgccagt ttacgatttt tttcaggttt ttcttcagca ccaaatccag ccagatgcgg
    15421 gtacttctgc cattaccctc caaaaacgga tgggcaatgt tcatttcaac atatttggcg
    15481 atgatttctt caaaagtccg ctcgggcatc tgctcgattt taaccaaagc ctcttttaaa
    15541 tacatggcgt tggcaaaacg aaaaccgcct ttggaaatgt tgtcttccct gatttgaccc
    15601 gcaaaatcat ataagccgcc gaacaggtaa cggtgaatct gttgcaggcc cgcggtggta
    15661 ccgacttcga tacggtcgat gtcgccgctt tcaaacaggc ggcgggcatt atgcaggctt
    15721 tgttcgtcta tggatttcat cgtttttcct atcgggtttt cagacggcat cggtgtcttg
    15781 tcaggtctcg acccaaccta cctttaccct ttcaactcgt ccaaatcggc aacattaatc
    15841 gtttgtcggt tgcggtacac caataccata atcgccaaac cgatggcaga ttcggcagcg
    15901 gcaacggtca atacgaagaa tacgaaaatt tgtccggcag tatcgcccaa atgttgcgag
    15961 aaggcgataa agttgaagtt caccgccaag agcatcagct cgatggacat cagcaatacc
    16021 agcacgtttt tgcggttcat aaagataccc attgcgctga taccgaacag gagcgcaccc
    16081 aataccagat aatgcgtcaa ggtaatcatg ctttgccctc cccttccggc ttgaggccgt
    16141 ctgaaacttc gctctcttcg gcagattcga cttgcggttt gaccgcttcc attttcacca
    16201 gacgcatacg gccttgatcg gcgcgtactt taacttggtc ggcaggatcc atgcgtttcg
    16261 gattggtggt tttacggtaa accagcgcaa tcgccgccac catacccaac agcagcaata
    16321 ccgccgccaa ttcaaacggc aacaggtagt cggtataaat acggctgccc aaatcgcgga
    16381 tattgttgta atcggccgga atgtctttca tcagaccaaa tgcggccagg tcggttttcg
    16441 ggttgaccag aatcaggatc agggcaaccg ccaacaatgt gccgaccaca ccggcaaccg
    16501 gcgcatgacg ccagaaaccg gcgcgcattt cttcaatgtc gatgttcaac atcatcacaa
    16561 cgaacaggaa caacaccatc acggcgccga cgtaaaccac caccagcgtc acgcccaaaa
    16621 actcggcctg catcagcatc caaagcatcg cgctcacgca gaaggtcagc accagatgca
    16681 aagcggcgtg gacagggttt ttggcggtaa cggtacgaac cgcaccgtac aaaacgatgg
    16741 cggcaagaat atagaacaga atcgcggaaa aagtcattcg tctgctcctt aacgatacgg
    16801 cgcgtcagcg gctttgcgtt tggcgatttc agcttcgtat ttgtcgccaa tggccaaaag
    16861 aatcggcttg gtcatgtgca agtcgccttt tttctcgccg tggtattcaa aaatatgggt
    16921 ttccacaatc gcatcggtcg ggcaggcttc ttcgcagaaa ccgcagaaga tgcacttggt
    16981 caggtcgatg tcgtaacgct tggtgcggcg cgtgccgtct tcgcgctctt ccgattcgat
    17041 gttgatcgcc attgcggggc aaacggcttc acacaattta cacgcgatgc agcgttcctc
    17101 gccgttcgga taacggcgtt gcgcgtgcag accgcggaaa cgcacggatt gcggcgtttt
    17161 ctcttcggga aaataaattg tgtctttgcg ggcaaaaaag tttttgagcg ttacgcccat
    17221 gccttttacc aactcgccga gcagaaaggt ttttactaag ttagccatat tatgttccct
    17281 caaaacaggg atttcgttag gtattcaaaa tcgctttgtt cagacggcct caagatgccg
    17341 tctgaaactt atttccacaa attcagcggt gaaatcatcc acacgcccaa aatcacgatg
    17401 taggcgaagc cgatcggaat cagcactttc cagcccaaac gcatgatttg gtcgtaacgg
    17461 tagcgcggga aggttgcacg gatccacaga taccagtaca acactgccgc cattttcaca
    17521 aacatccaga atgcggaagg cgtaccgata aagccccagc tttgcgggaa cggagacaac
    17581 cagccgccga gaaacatcag cgatgtcagc gcggcaatca gaatcatgaa aatgtattcg
    17641 gcaaggaaga acagcgcgaa tgcgaagccg gaatattcaa cgtggtgtcc ggcaacgatt
    17701 tcggactcgc cctctgccac gtcaaacggt gcgcggttgg tttcggcaac ggcggaaatc
    17761 agataaacga tgaagatggg gaagagcggc agccagttcc acgagaacac ggaaccgccc
    17821 gcgatgcctt tggcttgtgc ggcaacgatg tcggagaagt tcatgctgcc cgacaccatc
    17881 acgacacaca ccagcgcggc actcatggca atctcgtagg aaatgctttg tgcggaagca
    17941 cgcattgcgc ccaagaacga atattttgag ttggaagccc agcccgcgat gatcacgccg
    18001 taaaccgaca gcgaggtaat catcaggatg tacaaaaggc cgatattgat attggtcagc
    18061 acccattctt cgttgaacgg aatcactgcc cacgccgcga aagacggggc aagcgacata
    18121 atcgggccga tgtagaacag ggctttgttt gacagcttcg gacgggttac ctctttaaac
    18181 aagagtttga acacatcggc aaacggctgg atcagacccc acggaccggt tacgttcgga
    18241 ccgacgcgaa gctgcatgaa gccgatgact ttacgttcaa aatacgtcag gtaggcaacg
    18301 gtcagaatca gcggaatcag gataatcacg attttgacga tgacggatac caccaagcct
    18361 acagtaatac ccaaatcgcc cagaccgagc gttgcggcaa agaggttttg gaaccattcc
    18421 tgcataatca agctcccgcc agttcaatag tgtccatcaa cgcacccagc gcggcatttt
    18481 cggtatgcag cggcagatgc accacgtttt caggcagtcc ggcatcggct ttgaccacca
    18541 cggacacgcc tgcgccgttt tgtttggcga cagcggtttg tccgtcttgc aggcccaagc
    18601 gtgccaaagt gtttggattt acacgcgcgg caggcacggc ggcatggctg gtttcttgca
    18661 acggcgcgga acggcgcacg atggcatcgg tgtgatagat gccgaccccg cccacgcgca
    18721 cgaggcggct tgaggtcgtc tgaaaatctt tttgagtcga agcggtgcgg ttgttcagtt
    18781 tggacggcag gctttctgca tccagcgcgt ctttcagaat cgcggcggta tcgtggtatt
    18841 caaagccttg caggtcaaac aggttgccca atacgcgcaa cactttccac atcggacgcg
    18901 aatcgccgaa gccttgtacc acgccgtgga aagattgcag acggccttcc atattgatga
    18961 agctgcccga ggtttcggta aacggcgcaa tcggcaacaa tacgtcgcac acgtccagca
    19021 gcgtttcgct gacaaacggc gtaaacgcca tcacgctttt cgcttgtttc aatgcggcta
    19081 cagcttttgc accgtcaacc gtatcgattt caggctcgac gttgagcagc aagactgcct
    19141 gtttcggcgc gtttgccatt tcggcaacgc tctcgcccga gttcacgccc aagacatccg
    19201 caccaacgct gttggcggct tgcggcaaaa tacccagcac tgcgccggtc gcatctgcca
    19261 gctcttgaac ggcggcataa atcgcggcgt aatcaggatg gttttgcact tccgcgccca
    19321 aaatcaccgc tgctttttca gcgtttttca ggctggcggt aacggcgtgt tccgcatcgg
    19381 cagacaggtt tttcagacga cctgcccact cgtcgggatg tacggcttct tgagacagaa
    19441 gcggcataaa caattcttcc ttgctgccgg ccaatacgct caaagccatg cggtctttag
    19501 cggcgcggcg caggcgggcg gtcagaagcg gctgttcttt gcgcaggttc gcaccgacta
    19561 ccaatacggc atcgttgtca gccaaagatt caatgctttg tcccaaccat tgtgcacctt
    19621 taaggtcgtc tgaaagacgt ttgtcttgtt ggcgcaaacg ggtggcaaag tttttaacac
    19681 ccaaaccatt ggcaagcttt ttggccagat acagctcttc aaccgtattc atcggattgg
    19741 cccaaatgcc gacttggttt tggttgccgt ctttggcgat acattcaatc gcgctgcgga
    19801 catattccaa cgcggttttc caatccacgt ccatccactc gccgccctgt ttgattttcg
    19861 ggtttttcag acggctttcg tgatacaggc cttcgtaggc gaaacggtcg cggtcagaca
    19921 gccaacattc gttaatcgct tcgttttcca gcggcaacac gcggcggacg gtatggtctt
    19981 tggtttgtat aatcaggttg ctgcccaaag cgtcatgggc ggaaacggat ttgcggcggt
    20041 tcaattccca agtacgcgcg ttgaagcgga acggtttgct ggtcaatgcg ccgacaggac
    20101 acaaatcgat gacgttgccc gacagctcgg tttccaccgt tttgccgata aagggcatga
    20161 tttcggagtg ttcgccgcga ttcaccatcg caatttcttg caaaccggcg atttcttcag
    20221 tgaaacgaac gcagcgggtg cagtggatac agcggctcat ttcctcggcg gaaaccaaag
    20281 gccccatgtc tttgccgacg acggaacgtt tttcttcggt gtagcggctg gtggtttttc
    20341 cgtagcccac cgccaaatcc tgcaactggc attccccgcc ttggtcgcag gtcggacaat
    20401 caagcggatg gttgatgagc aggaactcca tcacgccttc ctgcgcctct cgggcttttg
    20461 ccgaatgcgt acgcacaatc atgccgtctg taaccggcgt ggcacaggca ggcaggggtt
    20521 ttggggcttt ttctacgttc accagacaca tacggcagtt ggcggcgatg gaaagttttt
    20581 tgtggtaaca gaaatgcgga atataagtac cgagcttgtg cgcggcttca atcaccgtcg
    20641 cgccctgctc cacagatact tgtttgccgt cgatttcgat ttgtaacatg gttcgttcct
    20701 agttacgggt atttgataaa taatttttta tggagatcgt ctgaaaaatg ggtttcagac
    20761 ggccttttga gtttcattga caatcaatac tgtttaaaac gtttactgcc accttgccgt
    20821 cattcccgcg taggcgggaa tccatttttt gaatttcggc aactgctttt caaatatcgg
    20881 tttctttaga ttccactatg gattcccgcc tacgcgggaa tgacggcaaa gttaaatttt
    20941 tagcattttg cttttaacca atataaaacc aactaaaact ataacttatt tattatattt
    21001 ttaaatgact taaataactc tttaacagca cgctcattgt cttcatctgt aggctcaaac
    21061 ttttcacacc aattaattat atttacatcg ccatgcaata actctgcata acatcctact
    21121 gcatcgcaac taccaccccg tgtccttgac gtgccaaaaa taaaatcaca attatgcgaa
    21181 taaagtttgt ataaatttct cctaacctcg tattcattat caccagatga ataaaaacca
    21241 atcctctgac cttcatgatc aaatactgca acaaaatcta agccgtttcc atgtctttca
    21301 aaaaagacta gaaatttaga aaatttccga caaatctgat taaaaagcgt attgagtgtc
    21361 gtactcttac ctttgttggc tgcaccgtat agaataaaaa ttttagcttc caccattacc
    21421 accctcccca cttatgctct ttcatcggtc cgccgtgttc gatgtaatgc acaaactcat
    21481 cacggaaatg cttggtaaag cttcggacgg ggaagacggc ggcatcggca agggcgcaga
    21541 tggtgcggcc tgccatttgg ttgccgacag aatccagcaa atccaaatct tccattttac
    21601 ctttgccttc tacgatgcgg tggacgatgc ggtaaagcca gccggtgcct tctcggcaag
    21661 gcgtacattg gccgcaagac tcgtcgtagt agaagtagct caggcgctca agggctttca
    21721 ccatgcacac gtcttcgtcc atgacgataa tcgcgccaga acccagcatc gagcctgctt
    21781 tggaaatcga gtcgtagtcc atatttgtct gcatcatgat gtcggcaggc aatacgggcg
    21841 cggacgaacc gccgggaatg acggctttga gttttttgcc gccgcgcata ccgcctgcca
    21901 ttttcaagac ttcggcaaac ggtgtgccca atggcacttc atagttgccc ggacgctcga
    21961 catggccgga aatacagaat aatttggtac cgcctgcatt cggaatacct ttatcggcaa
    22021 atgcctgtcc gccgtcacgg ataatgaatg aaacggagga gaaagtttcg gtattgttga
    22081 tggtagtcgg tttgccgtac aggccgaacg aagcagggaa tggcggttta aagcgcggct
    22141 ggcctttttt gccttccagc gattcaagca atgcggtttc ttcgccgcag atgtatgcac
    22201 cgtagccgtg gtgggcgaag agttcgaatt caaaatccga acccaaaata tttttaccca
    22261 aaaagcctgc ggcacgcgcc tgctccaaag cggcctcaaa gcgttggtag ccttcaaaaa
    22321 tttcgccgtg gatatagttg taaccggctt tcgcgcccat cgcgtaaccg gcgataatca
    22381 tgccttcaat cagggcatgg gggttgaaca taataatgtc gcggtcttta aatgtacccg
    22441 gctcgccttc gtcggtgttg caaacgacgt acttttcgcc ggggaaagaa cggggcataa
    22501 agctccattt caaaccggtc gggaagcccg caccgccacg accgcgcaag ccggaggttt
    22561 tgacttcgtc aatcacatcg gtttgcgaga tgttttcgga caggatttta cgcagggcgg
    22621 tataaccgcc acgtttgacg tattcgtcca atgtccagca atcgggattg gcggtatcca
    22681 cttggtcaaa aatcacgcct gattggtaaa tagccatttt tggtgtgcct gtttgttttc
    22741 gtatcggttg cggccgctgt ttcagacgac cttaagatgt ctttgtgtac cggcttgtaa
    22801 cgtcgtctga aataaaatct agtttatcaa atcgatattt tcagacgacc tttaatcgtt
    22861 tttgttggat ctcgaccact tgcttgtctg ccgtcattcc cgcgcaggcg ggaatccatc
    22921 ctcaatggta agcaatgtct tattaaattc agaaaccgaa tcttaccggt ggattcccgc
    22981 ctgcgcggga atgacggcat ttcggtattt cagtagggcg gattcttaaa tccgacattt
    23041 tgccttttta cccactctgt cggatacaag tatccgacct acgtttaaat cgtcgtttca
    23101 gacgacctac tccaactccg ccagtttctt ctcaatcgcc tcttcagtca taaagctgca
    23161 cattttatga ttattcaaca acataacagg agcatcgccg cacgccccca tgcattcgcc
    23221 ttcgacaagg gtaaatttgc cgtcaggcgt ggtttcgccg tagctgatac cgagtttttg
    23281 tttgaggtat tcgccggttg ccataccgcc gcgcagggcg cagggcaggt tggtacaaac
    23341 ggtcagtttg tatttgccga caggctcaag gtcgtacata ttgtagaagg tagcgacttc
    23401 gtaggcttgt gcaggcgaga tgccgatata gtctgcaaca aaggcgatgg tttcgggggc
    23461 gagccagcct ttttcggttt gtgcaatacg caatgcgccc ataatggcag agcggcgttg
    23521 gtcggcagga tattttgcca actcaatatc aatttgtttt aaggattctg cggataacat
    23581 tatcggtcaa cctccccgaa tacgatgtcc tgcgtaccga tgatggcaac gacgtcggcg
    23641 agcatgtggc cttttgccat ttcgtccatg ccttgcagat gggcgaagcc gggtgcgcgg
    23701 attttcaggc ggtagggttt gtttgcgccg tctgaaatga tgtaaacgcc gaactcgcct
    23761 ttcggatgtt cgacagcggt gtaggtctcg ccctcgggaa cgtgcatacc ctcggtaaag
    23821 agtttgaaat ggtgaatcag gtcttccata cctgttttca tttcggtacg tttgggcgga
    23881 gcaaatttgt ggtttgtggt aatgaccgga cccggattga cacgcaacca ctcggaacat
    23941 tgtttgatga tgcgtacgga ttgacgcatt tcttccatac ggcagaggta gcggtcgtag
    24001 cagtcgccgt tcacgccgac agggatgtcg aaatccattt tgtcgtacac ttcgtaaggc
    24061 tgtgtcttac gcacgtccca ttccacgccc gaaccgcgca acatcacgcc ggtaaagcct
    24121 ttttgcatgg cacgttcggg ggagacgacg ccgatgccga cggtacgctg tttccaaata
    24181 cggttgtcgg tcaggagggt ttcgagtgtg tcgatgtttt tcgggaaacg ttcgcagaag
    24241 gcatcgataa agtcgagcat cgtgccttcg cgggattcgt tgagctgctt caatactttg
    24301 gcattgcgga atttgctgcc ctcgtatttg ggcatgaagt cgggcaggtc gcggtaaacg
    24361 ccgccgggac ggaagtaggc tgcgtgcata cgtgcgccgg acacggcttc gtacaagtcc
    24421 atcaactctt cgcggtcgcg gaaggcataa aggatggcgg tcatcgcacc aatgtcgaat
    24481 gcgtgcgaac cgatgcccat caaatgattg aggatgcgcg ttacttcggc gaacatcacg
    24541 cggatatatt gggcgcggat aggtacatcg ataccggcaa gtttttctac tgccaagcaa
    24601 tacgcctgct cgttgaccat catggaaaca tagtccaagc gatccatata gggcagggct
    24661 tgcagatagg ttttggtttc agccagtttt tcagtacctc ggtgcaggag gccgatatgc
    24721 gggtcggcac ggacgatttg ttcgccgtcc agctccaaaa tcatacgcaa tacgccgtgc
    24781 gccgcagggt gttgcgggcc gaagttgatg gtgtagtttc ttaatttatt ggccaccgta
    24841 gttctcctca cggacgatac gcggcgtgat ctcgcgcggc tcgatggtaa caggttggta
    24901 aatcacgcgt ttttgctctt cgtcgtaacg catttccaca tagccggaaa tcgggaagtc
    24961 tttgcggaac ggatgtccga cgaaaccgta atcggtcagg atgcggcgta ggtccgggtg
    25021 gttgttgaac atgatgccgt acatatcgaa ggcttcgcgt tcgtaccaat ccgcgctgtt
    25081 gtaaatatcg actacggatt cgactacagg gaagtcgtcg tctgaaaccc agacgcgtac
    25141 gcggatgcgt tgattgtttt taacggaaag caactgactg acgacggcaa agcgtttgcc
    25201 ctgccatact tcgtttttgt aagtgctgta atcgacaccg cacaaatcga ccagaagctc
    25261 gaaatgcagc tcttcatgat cgcgcaatgc ggtcatgact gaaatatagt gttcgggcag
    25321 acactcgacg gtaatctcgc ccaaagctga aatgactttg cctgcctgat tgcccaaaac
    25381 gcggctgacg gtttcgtata agttttgaat gcttgccata tcttcctcct cttactcgtc
    25441 acgcgcgatg gtggaagtgc gcttgatttt ttgttggagc tgaatcaggc cgtaaatcag
    25501 ggcttccgca gtcggcggac aacccggcac ataaacgtct accggcacga cgcggtcggc
    25561 accgcgcaca acggaataag aatagtgata atagccgccg ccgttggcac acgagcccat
    25621 agacaatacc cagcgtggct cggcgagctg gtcgtataca cggcgcaggg ctggcgccat
    25681 tttgttggtc agcgtacctg ccacaatcat caggtcggcc tgacgtgggg acggacggaa
    25741 aatgataccg aaacggtcaa ggtcataacg cgccataccc gcatgcatca tttccacggc
    25801 gcagcaggcc aagccgaaag taaccggcca caacgaaccg gtacgcatat agttcaacac
    25861 cgtatccgcg ctggtggtga tgaaaccttt tttcaaaacg ccttctattc ccattccagc
    25921 gcaccttttt tccattcgta aacaaagcct accgtcagaa cgacgataaa caccaacata
    25981 gaccagaagc cgtacgcgcc caaatctttg aacacaactg cccacggcaa catgaacgcg
    26041 acctccaaat caaacaggat gaagaggatg gcgacgaggt aatagcgcac gtcaaacttc
    26101 atcctcgcat tttcaaaggc ttcgaaaccg cattcgtaag gcgcgtcttt ttcggcatag
    26161 tggcgtttcg ggcctaaaat cgtgccgagc aggataaaca gtacgccggc cgcgaggccg
    26221 acgaggataa agacaaagac gggaaagtaa gcggacaaca tggttacacc caaatccgtt
    26281 aacaaaattt ctacaataat ttcgtatttt agcgaatttc aaaaaccatt aaaaggtaaa
    26341 tatcggcaaa acgcccaaaa aaacccaata aatacaatca tgttatgata acgattctta
    26401 tttgatttta taaggtcata taaattttta caccgtaatt cgtg
//
LOCUS       DAWITQ010000010        24869 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.010, whole genome shotgun sequence.
ACCESSION   DAWITQ010000010 DAWITQ010000000
VERSION     DAWITQ010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 24869)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24869)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24869
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.010"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(91..1038)
                     /locus_tag="WIX18_000392"
     CDS             complement(91..1038)
                     /locus_tag="WIX18_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraslipin"
                     /protein_id="HEZ5237549.1"
                     /translation="MEFFIILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGL
                     NILIPFIDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSN
                     YIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVSALDEAAGAWGVKVLRYEIKD
                     LVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAV
                     NASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGADAVNLKIAEQYVA
                     AFNNLAKESNTLIMPANVADIGSLISAGMKIIDSSKTAK"
     gene            complement(1053..1460)
                     /locus_tag="WIX18_000393"
     CDS             complement(1053..1460)
                     /locus_tag="WIX18_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HEZ5237550.1"
                     /translation="MTVWFVAAVAVLIIELLTGTVYLLVVSAALAGSGIAYGLTGSTP
                     AAVLTAALLSALGIWFVHAKTAVGKVETDSYQDLDAGQYAEILRHAGGNRYEVFYRGT
                     HWQAQNTGQDVFEPGTRALIVRKEGNLLIITHP"
     gene            1541..2200
                     /gene="ung"
                     /locus_tag="WIX18_000394"
     CDS             1541..2200
                     /gene="ung"
                     /locus_tag="WIX18_000394"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEZ5237551.1"
                     /translation="MDTWHDALGNEKRQPYFQEILNAVRQERLSGQIIYPPAEDVFNA
                     FRLTAFDRVKVVILGQDPYHGAGQAHGLAFSVRQGVRIPPSLLNIYKELETDINGFSI
                     PDHGCLTAWAEQGVLLLNTVLTVRAGQAHSHALLGWERFTDTVIRQLAAHRKHLVFML
                     WGGYAQQKGRLIDSQNHLILTAPHPSPLSAYRGFFGCRHFSQANSYLSQHGIEPINWK
                     L"
     gene            2241..2759
                     /locus_tag="WIX18_000395"
     CDS             2241..2759
                     /locus_tag="WIX18_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HEZ5237552.1"
                     /translation="MELHAGTTFDDIVKLKNTADIGDRLNKIIAQIAEANDLKGVIDV
                     TDFNDEDKLGKGKEMIDRLSRLVGIFKKLNLSSNQAEDDDLLGDAYEYLMRHFATESG
                     KSKGQFYTPAEVSRIMAKIIGISADCRPAPAFMTRPAARVRCCSKPPPKPAAKSAFTV
                     RKKMWQPRPLPV"
     gene            2832..3305
                     /locus_tag="WIX18_000396"
     CDS             2832..3305
                     /locus_tag="WIX18_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HEZ5237553.1"
                     /translation="MKTTGLRPSILPLPIRLIPPEKNGDYAFLLHLLKSLKPSGKGAI
                     ILPHGVLFRGNAEARIRTELLNLDLIKGIIGLPANLFYGTGIPACIIVIDKEHAQTAQ
                     FAEEGTNQVISGGSVFMIDASRGFIKDGNKNRLREQDIHKIIDTFTNLVTAVWCI"
     gene            3653..4597
                     /locus_tag="WIX18_000397"
     CDS             3653..4597
                     /locus_tag="WIX18_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HEZ5237554.1"
                     /translation="MAHPDYAAFKAGHLAKFAAWHTQNDLAAIQPGRLIRKWSESLLD
                     AFKPGSLIEEYDFYQILTDYWAETLQDDVYLIAQDGWKAVKNLAEITKESDEAANLTV
                     VFEETETDKKGKAKTKRISKKYRSEVIAPELVARRYFSDGIAKLEEKQSELERLSQEL
                     ENHIEEHGGEEGALNDVLDAKGKLSAKLLKTALEESGIEEGERAVLQTTQTLMTQEKA
                     AKDAVKTQIEALNLAVFKQFGRLSEAEIKQLAVQDKWLADLQSRIENRLENSIQQLIS
                     RLNTLEDRYRSPMAELAREVEKWQSKVNAHLENMGFGG"
     gene            4739..4873
                     /locus_tag="WIX18_000398"
     CDS             4739..4873
                     /locus_tag="WIX18_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF45 domain-containing protein"
                     /protein_id="HEZ5237555.1"
                     /translation="MTHLLERHRNARFMAHMDNFLPNWQSIKQQLNALELFAQIYNLT
                     "
     gene            complement(5163..5678)
                     /locus_tag="WIX18_000399"
     CDS             complement(5163..5678)
                     /locus_tag="WIX18_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237556.1"
                     /translation="MKSKLPLILINFSLISSPLGANAAKIYTCTINGETVYTTKPSKS
                     CHSTDLPPIGNYSSERYIPPQTPEPVSSPSNGGQVVKYKAPVKTVSKPAKSNTPPPQQ
                     APSNNSRRSILEAELSNERKALTEAQKMLSQARLAKGGNINHQEINALQSNVLDRQQN
                     IQALQRELGRM"
     gene            complement(6144..8066)
                     /locus_tag="WIX18_000400"
     CDS             complement(6144..8066)
                     /locus_tag="WIX18_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEZ5237557.1"
                     /translation="MIEIKNLTLQRGLKVLLDKANATVNPGQRVGLIGKNGTGKSSLF
                     ALIKGEITQDGGDVSIPKNWRLASVSQETPDLDISALDYVLQGDAELQTLQTALRQAE
                     AQNDGMKQAEYHAKLEEIDAYTAPARAAKLLNGLGFSQEEHSRPVKSFSGGWRMRLNL
                     AQALICRADLLLLDEPTNHLDLETVLWLENHLASLPCTQIIISHDRDFLNAATTQTIE
                     LSQQKLTQYGGNYDFYQNERAQRLAQQQAAYVKQQAQIKHLQSFIDRFKAKATKAVQA
                     QSRMKALAKLERIAPAHLDSEFSFEFYNPEHLPNPLLKLEHADLGYEGKTVLHDITLS
                     LESGARYGLLGVNGSGKSTFIKALAGKIDLLSGSIVRSEKLNIGYFAQHQLDTIRADQ
                     NPVWHIQQLSPEVREQEIRNFLGGFNFVGDMALQKTEPFSGGEKARLALAMIIWQKPN
                     LLLLDEPTNHLDLDMRHALTLALQSFQGALIIVSHDRSLLEATTDSFLLIDKGRLKNF
                     DGDLNDYRQWRLAQENAAAAPAASAQSQSRKDTKRIEAQIRQEKARRGKPIQQKIDRA
                     EKEMAQLSEIQTACEAFLAQEDAYLEANKEKLQNTLSQLAKVKTQLAQIEEVWLACQE
                     ELERIETEIEKQFAER"
     gene            complement(8143..8538)
                     /locus_tag="WIX18_000401"
     CDS             complement(8143..8538)
                     /locus_tag="WIX18_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mth938-like domain-containing protein"
                     /protein_id="HEZ5237558.1"
                     /translation="MMRQRGKKMLFEENPIDGQFAEYECGAGGIRLAGQSFHKPVLVH
                     KDSVCLSQCRTLSDLTPENLLSDIKPVDYLEILIIGTGAAQEFIHPKIMADFSRIGIG
                     VECMNTDSAFRTLVFLHSEGRRAWAWLQP"
     gene            8711..10018
                     /locus_tag="WIX18_000402"
     CDS             8711..10018
                     /locus_tag="WIX18_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HEZ5237559.1"
                     /translation="MKPVNIGLLGLGTVGGGTAAVLRDNAEEISRRLGREVRISAVCD
                     LSEEKARQICPSAAFVKDPFELVARKDVDVVVELFGGTGIAKDAVLKAIENGKHIVTA
                     NKKLLAEYGNEIFPLAEEKNVMVQFEAAVAGGIPIIKALREGLAANRIKSIAGIINGT
                     SNFILSEMREKGSAFADVLKEAQALGYAEADPTFDIEGNDAGHKITIMSALAFGTPMN
                     FSACYLEGISKLDSRDIKYAEELGYRIKLLGITRKTGKGIELRVHPTLIPESRLLANV
                     NGVMNAVRVNADMVGETLYYGAGAGALPTASAVVADIIDIARLVEADTAHRVPHLAFQ
                     PAQVQAQTILPMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQT
                     TAEIVILTHSTVEKHIKSAIAAIEALDCVEKPITMIRMESLHD"
     gene            10011..10445
                     /locus_tag="WIX18_000403"
     CDS             10011..10445
                     /locus_tag="WIX18_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237560.1"
                     /translation="MTEPKHEMPTEEQVAARKKAKAKIRTIRIWAWVILALLASTALL
                     SQCAMSKPQAKQKIVESCVKNIPFAEKWQNDLRARGLDSNNTRLTVDYCKCMWEQPLD
                     RLSEKQISSFGKLGAQEQLDLLGGANAFETRDKQCVADLKSE"
     gene            complement(10504..10773)
                     /locus_tag="WIX18_000404"
     CDS             complement(10504..10773)
                     /locus_tag="WIX18_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEZ5237561.1"
                     /translation="MNKSELIEAIAQEADISKAAAQKALDATTNAVTTALKQGDTVTL
                     VGFGTFYVGERAERQGRNPKTGEPLTIAAAKTPKFRAGKALKDAL"
     gene            complement(10955..13417)
                     /gene="lon"
                     /locus_tag="WIX18_000405"
     CDS             complement(10955..13417)
                     /gene="lon"
                     /locus_tag="WIX18_000405"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HEZ5237562.1"
                     /translation="MTQKEKHFEEYAALATLPLRDVVVYPHMVLPLFVGRPKSIAALE
                     NAITREEPVFLLAQTDAALEEPVAADLYQTGTVAQVLQVLKLPDGTVKVLVEGLYRGR
                     VLTIEDTGGLFVSHIEAVVEEDTGGNTDLEAVRRTLLAQFEQYAKLNKKIPAEIIGSI
                     NGIAENSRLTDTVAAHLQLKLAQRQQILEIPEIGKRMEFLLAQLESELDIMQAEKRIR
                     GRVKRQMEKSQREYYLNEQIKAIHKELGEEDENGELDALEAGIKKAGMSKEAEEKCLS
                     ELKKLKMMPPMSAESTVVRNYIDTLLELPWKKKSRVSKDIAKAGLVLDTDHYGLEKVK
                     ERILEYLAVQKRMDKLKGPILCLVGPPGVGKTSLGESIAKATGRKYVRMALGGVRDES
                     EIRGHRRTYIGSMPGKILQNMAKAGVKNPLFLLDEIDKLGSDFRGDPASALLEVLDPE
                     QNNKFADHYAEVDYDLSDVMFIATSNSLNIPTPLLDRMEIIRLSGYTEDEKINIAMQY
                     LVPKQMKRNGVKEGELLVEESAVRDIIRYYTREAGVRSLDREIAKICRKVVMQITLDE
                     DKKRLSETKKTSKAKPKAVKVNEKNLHDYLGVRRFDYGVAESENRIGQVTGLAWTEVG
                     GELLTVEAAALPGKGVIQCTGQLGDVMKESVSAAWSVVRSRAESVGLASDFYEKKDIH
                     VHVPEGATPKDGPSAGIAMTLAMVSAFSKIPVRADVAMTGEITLRGEVLPIGGLKEKL
                     LAALRGGIKHVLIPKDNFKDLEEIPENVKTGLTIHPVKWIDEVLALGLESQPEPWAEP
                     SGAEAVAESASKPKPRSRATKH"
     gene            13668..14771
                     /locus_tag="WIX18_000406"
     CDS             13668..14771
                     /locus_tag="WIX18_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ5237563.1"
                     /translation="MSSFIFPDNGAEWRNESVQKPPKGWHYVRESGADGILKAAYQNI
                     ATVWQGDFHNAKQVLSAMKKRARKPAAVRSDADIAALFHAHRMKQAQQSRILNMLAVE
                     IRPGFVLDNKRAPDIRAALLDVYGEADGKPFFLPLNLLLGFMGAHEWHKKGVAVPQLG
                     GSIHVPFGVFSPLRGEYLDLLAHAPSTGFQTAFDIGTGSGVLAAILAKQGIPSVIGTD
                     TNPKAVACARANIARLGFEKQVEIRETDLFPEGFADLIVCNPPWLPAKPTSAVESALY
                     DPESAMLAAFLRDAPKHLNPDGEIRLIISDLAEHLGLRPADFLEKAFIRAGLRVADMM
                     KTKPKHKKAANPSDPLAFARTRETTFLYRLKKA"
     gene            complement(14799..16544)
                     /gene="recD"
                     /locus_tag="WIX18_000407"
     CDS             complement(14799..16544)
                     /gene="recD"
                     /locus_tag="WIX18_000407"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HEZ5237564.1"
                     /translation="MERQTDEFAQAAARAAIWFLARYAGSGSEVLANCTERLFQALQN
                     GHSFIRLSGGEADALSALAPVVGTSAAPLILEGRRLFLGRMWQLEYDLAAEIKRLAAA
                     GTSAPDAAGARQNLAKWFQGTGSEGQRDAAALALLQSFMVITGGPGTGKTTTVAKLLA
                     LICGEDENLPNIALAAPTGKAAAHMARALHRAINGFDAPEAIRRHLLKLEGQTVHRLL
                     KLRPPKMQAAFNPVYPLPLDVLVIDEASMLDTALMLQLLKAVKTGARVILLGDENQLP
                     SVGIGAVLSVLSHKTVLDGETHQRLAGFLPEHGFSVSANPPVLAQNTAHLSFSHRFGD
                     NSGIGCLARAAVSGDEGAWALFDRFPDELEHSECSPNARVERLYRAHKAYWQAVKDGN
                     IEAAYAGISDIVVLAAWRQDAEDFNEAYCSHVRRKMNIPEHQAYFAGEPIMIRQNDYA
                     LELFNGDIGLIMEDVGRQGSLAAYFADADGFKKVAVSCLPDFEPAFAMTVHKSQGSEY
                     REVWLLPPSAAPSDEGDDALSGLSKELLYTAITRAREKFVFFGGEETFRQAAATVKTR
                     QTALGSMLERVFSQE"
     gene            complement(16612..17307)
                     /gene="lolD"
                     /locus_tag="WIX18_000408"
     CDS             complement(16612..17307)
                     /gene="lolD"
                     /locus_tag="WIX18_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HEZ5237565.1"
                     /translation="MSELILKCEGVGKRYRDGGLDVRVLHGLDLEILAGESTGIIGSS
                     GSGKSTLLHILGGLDMPSEGRVLLMGEDLRTLSQRQLGILRNRHLGFVYQFHHLLPEF
                     SALENVMMPLLIGKKKREEAAETAMAMLEKVGLKHRSAHRAGELSGGERQRAAIARAL
                     VTQPKCLLADEPTGNLDRANARNVLDMMLELKTELGTGLVVVTHDDELAGRFERVMVM
                     KDGSLHPKQGANA"
     gene            complement(17300..18547)
                     /locus_tag="WIX18_000409"
     CDS             complement(17300..18547)
                     /locus_tag="WIX18_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HEZ5237566.1"
                     /translation="MFSLEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVL
                     SVMNGFQKEIRGQLLNVAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQAL
                     LANAGEIRGVQMRGILPSEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAE
                     VGNKVTVITPEGNVTPAGVVPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLD
                     KEVAGLRLKLADPQNAPALTAKLIPEAQRDTVWVRDWTFSNRSYFEAVELEKRMMFII
                     LTLIIAVAAFNLVSSLVMAVTEKQADIAILRTLGLSPAGVMKIFMVQGAFSGFFGTLA
                     GVVCGVLLGWNVGRVVAFFENLLGVHLINSQVYFIDYLPSDVDMGDVALIACISLGLS
                     FVATLYPSWRASKTQPAEALRYE"
     gene            18752..19030
                     /locus_tag="WIX18_000410"
     CDS             18752..19030
                     /locus_tag="WIX18_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237567.1"
                     /translation="MNIRTAFALCAIALSAAAAAYAKEIKIDANNTPYSEADAQKLAA
                     TAVGMGVKEPISLNGGSGSITVSGSSATQCVFKVGNGGALQIQGLNCK"
     gene            complement(19086..19703)
                     /gene="recR"
                     /locus_tag="WIX18_000411"
     CDS             complement(19086..19703)
                     /gene="recR"
                     /locus_tag="WIX18_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HEZ5237568.1"
                     /translation="MSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEK
                     LVDALQTALKQVHHCAMCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEVANCH
                     DGLYFVLMGQINTALGMDVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSE
                     FFKNLPYKVSRLSQGIPLGGELEYVDAGTLAQAVYERRLIKEGGA"
     gene            complement(19770..21308)
                     /locus_tag="WIX18_000412"
     CDS             complement(19770..21308)
                     /locus_tag="WIX18_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HEZ5237569.1"
                     /translation="MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGD
                     EKISDHSINNAIQNEQADGGGPSRDAVFQSLLQRAYLKQGAKLLGISVSSEQIKQIIV
                     DDPNFHDANGKFDHALLNRYLSQRHMSEDQFVEEIRDQFALQNLVNLVQNGVLVGDAQ
                     AEQLIRLTQVNRTIRSHTFNPDEFIAQVKVSEADLQKFYNANKKDYLLPQAVKLEYVA
                     LNLKDFADKQTVSETEVKNAFEERVARLPANEAKLSFEQEKAAVENELKMKKAVADFN
                     KAKEKLSDDAFNHPASLAEAAKNSSLKVETQETWLSRQDAQMSGLPENLINAIFSDDV
                     LKKKHNSEVLSINNEIAWVVRAKEVREEKTLPFAEAKDAVRQAYIRAEAAKLAENKAK
                     DVLTQLNGGKAVDVKWSEVSVLGAQQARQSMPPEAYAELLKAKPTNGKPAYVRLTGLP
                     APVIVEVQAITPPDDIAAQLPLAKQALAQQQSANTFDLLIRYFNGKIKQTKGAQSVDN
                     GGGQ"
     gene            complement(21362..21736)
                     /locus_tag="WIX18_000413"
     CDS             complement(21362..21736)
                     /locus_tag="WIX18_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase"
                     /protein_id="HEZ5237570.1"
                     /translation="MIVLHGIPNCDTVKKAKNRLAGYGLEFEFRDFKKQMPSEAEICS
                     WLEQVPLETLLNKRGTSWRKLDAETQQKALSSTAEAVKLMSEMPSLIKRPVLECGGKV
                     YAGFSEETYDGIFNRQAPCRQG"
     gene            21886..23514
                     /locus_tag="WIX18_000414"
     CDS             21886..23514
                     /locus_tag="WIX18_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATPase"
                     /protein_id="HEZ5237571.1"
                     /translation="MISTNGITMQFGAKPLFENVSVKFGEGSRYGLIGANGSGKSTFM
                     KILGGDLEQTAGEVAIENGVRLGKLRQDQFAYEDMRVLDVVMMGHTEMWAAMTERDAI
                     YANPEATEDDYMKAAELEAKFAEYDGYTAEARAAELLSGVGISEDLHNAKMAEVAPGF
                     KLRVLLAQALFSKPDVLLLDEPTNNLDINTIRWLEGVLNQYDSTMIIISHDRHFLNEV
                     CTHMADLDYNTITIYPGNYDDYMLASAQSRERALKDNAKAKEKLQELQEFVARFSANK
                     SKARQATSRLKQADKIKSEMVEVKPSTRQNPYIRFEADEKAKLHRQAVEVEKLAKRFE
                     TQLFKNLNFILEAGQRLAIIGPNGAGKSTLLKLLAGAYNPEYSDGLLPDEGSIKWAEK
                     ASVGYYPQDHENDFDVDMDLSEWMRQWGQEGDDEQVIRGTLGRLLFGSNDVVKKVKVL
                     SGGEKGRMLYGKLLLLKPNVLVMDEPTNHMDMESIESLNMALEKYNGTLIFVSHDRQF
                     VSSLATQIIELDGKGGYEHYLGDYESYLEKKGVA"
     gene            23599..24852
                     /locus_tag="WIX18_000415"
     CDS             23599..24852
                     /locus_tag="WIX18_000415"
                     /EC_number="2.7.7.72"
                     /EC_number="3.1.3.-"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional CCA addition/repair protein"
                     /protein_id="HEZ5237572.1"
                     /translation="MQTYLVGGAVRDYLLGLPVKDRDWVVVGADAQTMLAQGFQPVGK
                     DFPVFLHPETHEEYALARTERKTAKGYAGFSFHTDKDVTLEQDLMRRDLTINAMAQDA
                     DGKIIDPFGGQRDLAAGILRHVSPAFAEDPVRILRTARFAARYKFEIAEETIKLMRQM
                     VENGEADALVAERVWQEFAKGLMEKNPRKMIEVLRECGALKVLLPEVNALFGVPQRAD
                     YHPEIDSGIHTLMTLQRAADMGLSLPERYAALLHDLGKAKTPSDILPRHHGHDLAGVE
                     PVREVNQRLRAPKHCAELAELVCRWHIIFHQVGQLKSQTILNVLKKTDAFRRPERFQT
                     ALNVCIADTQGRLNREHTPYPQRAHWLALLEAANQADSGKIAAECRSQGKAHLIAEQI
                     DRARLAQIAPLQKAFRAAQDKTEKH"
BASE COUNT         5763 a         6707 c         6459 g         5940 t
ORIGIN      
        1 tttgaagcgg aatacaacct tgcccgggtt taaataaaaa tgccgtctga accccgaaaa
       61 cagagcttca gacggcattt tcatcacggc ttatttggcg gttttgctgc tgtcgataat
      121 tttcataccg gcagaaatca ggctgccgat gtcggcaaca ttggcgggca taatcagcgt
      181 attgctttct ttggcaagat tgttgaacgc agcgacgtat tgttccgcaa tcttcagatt
      241 gaccgcatcc gcgccgcctt gggtttgaag ggcggcggca atttgacgga tggcttcggc
      301 attggcttcg gcaacaaggc gcagggattc cgcttcgcct ttggcgcggt tgatgcgggc
      361 gattttctcg gcatttgacg cattgaccgc ggcctgggcc tcgccttcgg attgttggat
      421 ttcggcttcg cgctgaccac tggcaaggtt gatttgttcg attttacggc cttcggattc
      481 ggcgatacgg gcgcgttttt cgcgttcggc agtaatttgc gcctgcattg agcgaaggat
      541 ttcttgcggc ggaaccaaat ccttgatttc gtaacggaga actttcacac cccaagctcc
      601 ggcggcttca tcgagggcgg aaacgacggt gctgttgatt tcgtcgcgtt cttcaaacgt
      661 tttgtccaac tccatacgcc cgataacgga acgcagcgtc gtttgggcaa gctgggtaat
      721 cgccataatg tagttgctcg aaccgtatga ggcgagtttg ggatcggtta cttggaaata
      781 gatgatgccg tcaaccgtca gctgggtgtt gtcgcgcgtg atgcagacct ggctgggtac
      841 gtctaaaggg atttctttca gcgaatgacg gtaggcgacg cggtcgataa agggaatcaa
      901 aatattcaaa ccggccgtca aggcgcgatg gaaacgtcca agcctttcga caacgtggac
      961 ttcctgttgt gggatgacaa caaaggattt gaaaccgaaa acggcgacgg ctaccaacaa
     1021 gataatgaaa aattccataa ttcctccgag tgttaagggt gtgtgataat aagaaggttg
     1081 ccttccttgc ggacaatgag ggcgcgcgtt cccggttcaa acacatcctg ccccgtattt
     1141 tgcgcctgcc agtgcgtacc gcgataaaaa acttcgtaac ggttgccgcc tgcgtgccgg
     1201 aggatttcgg catattgccc ggcatccaaa tcctgatatg aatccgtttc aacttttccc
     1261 acggcggtct tggcgtgtac gaaccaaata cccagcgcgg aaagcagagc ggcggtcaag
     1321 acggcggcag gcgtgctgcc ggtcagcccg taagcaatgc ccgaacccgc caaagccgcg
     1381 ctgacaacca aaagataaac cgttcccgtc aataattcga tgattaagac ggcaacagcg
     1441 gcaacaaacc atacagtcat acatttcccc acaaagcgcg tcgtttgaca aaatcacgcg
     1501 atatcagcag tatagccgaa tttgaaagga tagggcagat atggatactt ggcacgatgc
     1561 actgggcaac gaaaaacggc aaccgtattt tcaggaaatt ttaaatgcag tcaggcagga
     1621 acgtttgtcg gggcaaatca tctatccgcc ggcggaggat gtgttcaacg cattccgcct
     1681 gacagcgttt gaccgagtca aagtcgtcat tctcggacaa gacccgtatc acggggcagg
     1741 gcaggcgcac ggtttggcat tttccgtcag gcagggtgtc cgcataccgc cgtctttact
     1801 caatatctac aaagagttgg aaaccgacat caacggtttt tccattcccg atcacggctg
     1861 cctgacggct tgggcggagc agggcgtatt gcttctgaac acggttttga cggtgcgtgc
     1921 aggacaggcg cattcgcacg cccttttagg ctgggaacgc tttaccgata ccgtcatcag
     1981 gcagcttgcg gcgcaccgca agcaccttgt cttcatgttg tggggtgggt atgcacaaca
     2041 aaaagggagg ctgatagaca gtcaaaatca tttgatattg accgcaccgc atccgtctcc
     2101 tctgtcggca tatcgcggtt ttttcggctg ccgccatttt tcacaggcaa acagctattt
     2161 gagtcaacac ggtatcgaac cgataaactg gaagctatga atgccgatat agccgttgcc
     2221 gccggcgtgt taaaatcgcg attgagctgc acgccggtac gacttttgac gacatcgtca
     2281 aactcaaaaa caccgccgac atcggcgacc gcctgaataa gattatcgcc caaattgccg
     2341 aagccaacga cttaaaaggc gtgatcgacg ttaccgactt caacgacgaa gacaaactgg
     2401 gtaaaggtaa ggagatgatc gaccgtttga gcaggcttgt cggcattttt aaaaagctca
     2461 acctttcttc caaccaagcc gaagacgacg atttgttagg tgatgcctac gaatacctga
     2521 tgcgccattt tgcgaccgag tcaggcaaat ccaaagggca gttttacacg cctgccgaag
     2581 tctcccgcat tatggcgaag attatcggaa tcagcgcaga ttgccgtcca gcaccagcgt
     2641 ttatgacccg acctgcggct cgggttcgct gttgctcaaa gccgccgccc aagccggcag
     2701 ccaaatcagc ctttacggtc aggaaaaaga tgtggcaacc gcgtcccttg cccgtatgaa
     2761 tatgattttg cacaacaacg aaaccgccga aatcaacacc gggaacacct tgtccgattc
     2821 gtctttccgt gatgaaaacg acgggcttaa gaccttcgat tttgccgttg ccaatccgcc
     2881 ttatcccgcc cgaaaaaaac ggcgattacg cctttttgct gcatctgctc aaaagcctga
     2941 aaccaagcgg caaaggtgcg attattcttc cgcacggtgt gctgtttcgc ggcaatgccg
     3001 aagcgcgtat tcgcacggaa ttgcttaacc ttgaccttat taaaggcatt atcgggctgc
     3061 ctgccaacct gttttacggc acgggcattc ctgcctgcat catcgtcatc gacaaagaac
     3121 acgcccaaac cgcccaattt gccgaagagg gaacaaacca agttatcagc ggcggcagcg
     3181 tgtttatgat tgacgcatcg cgcggcttca ttaaagacgg caacaaaaac cgtctgcgtg
     3241 agcaagacat tcacaaaatc atcgacactt tcacaaacct cgttacagcc gtatggtgca
     3301 tttaagcgaa atcgcagcac aagattacaa ccttaatctg cctcgctata tcgacagcgg
     3361 agaagtcgaa gacctgcaaa atctcgccgc ctatctatct ttatggcggc atacctgcgc
     3421 acgatatgga cgcattggaa gcctattggc aagttttagg ccgtatgaaa aacgagttgt
     3481 ttgccgaaca cgatggccac tttaccacta tacaacggaa tcgattgcaa atctttccca
     3541 ctctcaacag cttaaaatcc tgcgggattg gtgtggaatt tagggctaat ctagtacagc
     3601 cccaaattta atccactata aaatcgaaag cagccaaatc aaagcccata tattggcgca
     3661 ccccgattac gccgccttca aagccggaca cctggcaaag tttgccgcgt ggcacactca
     3721 aaacgacctt gccgccatcc aaccgggcag gcttatccgg aaatggagcg aaagcctgct
     3781 ggacgcgttc aaacccggca gcctgattga agaatacgat ttctaccaaa tcctgacgga
     3841 ctactgggcg gaaaccctgc aagacgatgt ttatctcatc gcccaagatg gctggaaggc
     3901 ggttaaaaac ctggccgaaa tcaccaaaga aagcgatgaa gccgcgaacc tgaccgtcgt
     3961 ctttgaggaa accgaaaccg acaaaaaagg caaagccaaa accaagcgca tcagcaaaaa
     4021 ataccgcagc gaagtcatcg cccccgagct ggttgcccgc cgctactttt cagacggcat
     4081 cgccaagctg gaagaaaaac aaagcgagct ggaacgccta agccaagaat tggaaaacca
     4141 catagaagaa cacggcggcg aagagggtgc gctgaacgac gtattggatg caaaaggcaa
     4201 actttccgcc aaacttctga aaaccgcatt ggaagaaagc ggcatagaag aaggcgaacg
     4261 ggctgtttta caaaccaccc aaacactgat gacgcaggaa aaagccgcga aagacgcagt
     4321 caaaacccaa atcgaagccc tgaaccttgc cgtattcaaa caattcggcc gactttccga
     4381 agccgaaatc aagcagcttg ccgttcaaga caaatggctt gccgatttac aaagtcgaat
     4441 cgaaaatcgc ttggaaaaca gtattcagca gcttatcagc cgcttgaaca cgctggaaga
     4501 ccgctaccgc agcccgatgg ccgagcttgc ccgagaagtg gaaaagtggc aaagcaaagt
     4561 caatgcccac cttgaaaata tgggttttgg aggctgaaat ggcggcacag acaggctata
     4621 aggcgagcgg gttttgagac ctttgcaaaa ttccccaaaa tcccctaaat tcccaccaag
     4681 acatttaggg gatcgcggtt cgggtgtccg caccgcttaa tacgtcgtcg tccacgaact
     4741 gacccatttg ctcgaacgcc atcgcaacgc ccgttttatg gcgcatatgg acaactttct
     4801 cccaaactgg caaagcatca aacaacagct taatgccttg gagttatttg cacaaatata
     4861 taatttaaca taatatacat tatgcgaact atcggaaaca gttgtacgtg tccctgtggt
     4921 ctttccaagt aggaaaatta aagtatggcc aatgcggctg aatgtatagc ccggagcatc
     4981 cgcgtatccg aaggtactga acgacatgcc ctgcatccct ttcgacgctt ccatccagcc
     5041 ggtattggga aatacgttga ccttcaatat aatatacagg cagccgacac acaggatatg
     5101 ccgctgcttt ttcatcattt cttctgtcaa atccttggaa cggtcgattt gaaaacacgg
     5161 ctttacatac gccccagttc cctttgcagg gcttgaatat tttgctgcct gtccaataca
     5221 ttgctttgta atgcatttat ttcttgatgg ttgatgttgc cgccctttgc cagacgtgct
     5281 tgtgataaca ttttttgggc ttcagtcagg gctttgcgtt cgttgctcaa ttctgcttcg
     5341 agaatggagc gtctgctgtt gtttgagggt gcttgttgcg gcggcggcgt attggatttt
     5401 gccggcttgg atactgtttt gaccggggct ttatatttga caacctgtcc gccgtttgac
     5461 ggtgatgata ccggttcggg cgtttggggc gggatatagc gttcgctgct gtagttgccg
     5521 attgggggca aatcggttga gtggcagctt ttggacggct tggtggtgta aacggtttct
     5581 ccgttgattg tgcaggtgta gattttggcc gcattcgcac ccaatgggct tgaaatcagg
     5641 gaaaagttga ttaggattaa ggggagtttt gatttcataa tgtgcttgat gctcggataa
     5701 ttatttgatt ttttggtatt ttttataatg ctttcttggc gttttacggg cttttctttt
     5761 cggttgtttg cttttgattt tctttcgggg ctttggcagc ctgcttgttc tttttcccgg
     5821 caggtttttt gtttttcttt ttactttcta tgtgtatttt ggcttcttaa ctgagttttt
     5881 taattttcag gcggtatccg cctccctgat ggctgctgat tttaggtaaa tccgcatcgg
     5941 cgcacgatcc tgctggggct gatgtatata cgcttttgcc atttgagttg caatggtata
     6001 cggaggcttg cgccgccgcg ccggaaaggg acaggagacc caaggcggca aaaagtctga
     6061 tgtttatacc ggtaaaaggc ggtaataacg cccgaattat accgttattg gcaggcaaag
     6121 ataagcaccc tgcccgcgct tctttatcgc tcggcaaact gtttctcgat ttcagtttca
     6181 atccgttcca attcttcttg acaagccagc caaacctctt cgatttgggc aagttgtgtt
     6241 ttgacttttg ccagctggga taaggtattt tgcaattttt ctttgtttgc ttcaaggtaa
     6301 gcgtcttctt gtgctaaaaa tgcttcacat gccgtctgaa tttcggaaag ctgcgccatt
     6361 tctttttcgg cacggtctat tttctgctgt atcggcttgc cgcgtcgggc tttttcctga
     6421 cggatttgcg cttcgatgcg cttggtgtct ttgcggcttt ggctttgtgc ggatgctgcg
     6481 ggtgcggcgg cggcgttttc ctgtgccaaa cgccattggc ggtaatcgtt caaatcgccg
     6541 tcgaagttct tcagacggcc tttgtcgatc aggaggaagc tgtcggtagt cgcttcaagc
     6601 aggctgcggt cgtgcgatac gatgattaag gcgccttgga aactttgcaa cgcgagcgtt
     6661 aaggcgtggc gcatatccaa gtccaaatgg ttggtcggtt cgtcaagcag caacaggttc
     6721 ggcttttgcc agataatcat ggcaagggca aggcgggctt tttctccgcc ggaaaaaggt
     6781 tcggttttct gtaacgccat atcgccaaca aaattgaagc cgccgaggaa atttcggatt
     6841 tcttgttcgc gtacttcggg agaaagctgc tgaatatgcc aaacagggtt ttggtcggcg
     6901 cggatggtat cgagttggtg ttgggcaaaa tagccgatat tgagtttttc ggaacggacg
     6961 atgctgccag agagcaaatc gattttgccc gccaaggctt tgataaatgt agatttaccg
     7021 ctgccgttga cacccaataa accatagcgc gcgccgcttt ccagcgacag ggtaatgtcg
     7081 tgcaaaacag ttttgccttc gtaacccaaa tctgcgtgtt ccagcttcag caaaggattg
     7141 ggcagatgct cgggattgta aaactcaaag gaaaactcgc tgtccaaatg cgcgggagcg
     7201 atgcgttcga gctttgccaa agccttcatg cggctttgcg cctgaacggc tttggtggct
     7261 ttggctttga agcggtcgat aaaggattgc agatgtttga tttgcgcctg ctgtttgaca
     7321 taggcggctt gttgctgcgc gagacgctgc gcgcgttcgt tttggtaaaa atcgtaattg
     7381 ccgccgtatt gcgtgagctt ttgctgggac aattcgatgg tttgggtggt tgccgcattg
     7441 aggaaatcgc ggtcgtggga aatgatgatt tgcgtgcagg gtaaagaggc aaggtggttt
     7501 tccagccaca agacggtttc caaatccaag tggttggtcg gttcgtccaa aagcagcaaa
     7561 tcggcgcggc aaatcagggc ttgcgcaaga ttcaagcgca tacgccagcc gccggaaaag
     7621 gatttgacgg ggcggctgtg ttcttcttgc gaaaaaccca gcccgttcaa caattttgcc
     7681 gcgcgggccg gcgcggtata agcgtcgatt tcttccaatt tggcatgata ttccgcctgt
     7741 ttcataccgt cgttttgcgc ttccgcctgc ctcaatgccg tctgaagggt ctgtaactcg
     7801 gcatcgccct gcaaaacgta atctaaagcg gaaatatcca aatcgggcgt ttcttgggaa
     7861 acggaagcga gccgccagtt tttcggaatc gagacatcgc cgccgtcctg agtgatttca
     7921 cccttgatta aggcaaacag gctcgatttg cccgtcccgt ttttgccgat caaaccgacg
     7981 cgctgaccgg gattgacggt agcgttggct ttgtcgagca ggactttcaa accgcgttgc
     8041 agggtgaggt ttttgatttc aatcataacg gaaacatcgt cgggcgggaa aagcccgtat
     8101 tttacctgaa agtcagtgcc gatgccgtct gaaacgggaa atttacggct gaagccaagc
     8161 ccaagccctg cgcccttccg agtgcaggaa aaccaatgtc ctgaatgccg aatcggtatt
     8221 catacattcc acgccgattc cgattcgaga aaaatccgcc atgattttgg gatggataaa
     8281 ctcctgagcc gcgcccgtcc cgataatcaa tatttccaga tagtcaacag gtttgatgtc
     8341 ggacaacagg ttttccggag tcagatcgga caaggttcgg cattgcgaca ggcagaccga
     8401 atccttatgt acaagcacgg gtttatggaa actttgcccc gccagccgga ttccgcccgc
     8461 accgcattca tattccgcaa actgtccgtc tatcggattt tcttcaaaca acattttttt
     8521 accccgttgc cgcatcatct acaccgaaag gggtgcaaaa tcaggcgaat tcatgtagga
     8581 ttggcagatt tcatctgacc cgcctgccga tttcagacgg catttgattc aaagtgcggc
     8641 acaattatat cggcagcgga tattttcgtc tttcaatatt tacatttcag tcggcttaca
     8701 aggagacaca atgaagccag taaacatcgg tcttttaggt ttgggtacgg tcggcggcgg
     8761 tacggctgcc gtgttgcggg acaacgcgga ggaaatttcc cgccgcttgg ggcgcgaagt
     8821 gcgcatcagt gccgtatgcg acttgagcga agaaaaagcc cgccaaatct gcccgtccgc
     8881 agcctttgtc aaagatccgt tcgaactggt cgcgcgtaaa gacgtcgatg tcgtcgtcga
     8941 attgttcggc ggcacgggca ttgccaaaga tgcggtgttg aaagccattg aaaacggcaa
     9001 acacatcgtt accgccaaca aaaaactgct cgccgaatac ggcaacgaaa tcttcccgct
     9061 ggcggaagaa aaaaatgtca tggtgcaatt tgaagcggca gtagcgggcg gtatcccaat
     9121 catcaaagcc ctgcgcgaag gtttggcggc aaacaggatt aaatccatcg ccggcattat
     9181 taacggcacc agcaacttca tcctctccga aatgcgcgaa aaaggcagcg cgtttgccga
     9241 tgtactgaaa gaagcgcagg cattgggtta tgccgaagcc gatccgacct tcgacatcga
     9301 aggcaacgat gcgggccata aaatcaccat catgagcgca ctggcattcg gcacgccgat
     9361 gaacttttcc gcctgctacc tcgaaggcat cagcaaactc gacagccgcg acatcaaata
     9421 cgccgaagaa cttggctatc gcatcaaact gttgggcatt acccgcaaaa ccggcaaagg
     9481 catcgagctg cgcgtccacc ctaccctgat tcccgaaagc cgcctcttgg caaacgtcaa
     9541 cggcgtgatg aacgccgtgc gcgtcaacgc cgatatggtt ggcgaaacct tatattacgg
     9601 cgcgggcgcg ggcgcattgc cgaccgcttc cgccgtggtt gccgatatca tcgacatcgc
     9661 ccgcctggtt gaagccgata ccgcccaccg cgtaccgcat ctggcgttcc aacccgcgca
     9721 agtccaagcg caaaccatcc tgcctatgga cgaaattacc agcagctact acctgcgcgt
     9781 ccaagccaaa gacgaaccgg gcacgctggg gcaaatcgcc gcgctgttgg cacaagaaaa
     9841 cgtgtccatc gaagcactga ttcaaaaagg cgtgattgat cagaccactg ccgaaatcgt
     9901 gattctgacc cacagcacgg tcgaaaaaca catcaagtcg gcaatcgcag ccatcgaagc
     9961 actggattgc gtggaaaaac cgattaccat gatccgcatg gaaagcctgc atgactgagc
    10021 cgaaacacga aatgccgacg gaagagcagg ttgccgcgcg caaaaaagca aaagccaaaa
    10081 tccgcaccat ccgcatttgg gcatgggtca ttttggcgtt gctcgcttca accgccctgc
    10141 tctcccaatg cgcgatgtcc aaaccgcagg caaaacagaa aattgtcgag tcttgcgtga
    10201 agaatattcc gtttgccgaa aaatggcaaa acgatttgcg ggcccgcggt ttagattcaa
    10261 acaatacccg ccttaccgtc gactactgca aatgtatgtg ggagcagcct ttggacagat
    10321 tgagcgagaa acagattagt tccttcggca aactcggcgc acaagaacag cttgacctgc
    10381 tcggcggcgc aaatgccttt gaaacgcgag acaagcagtg tgttgccgat ttgaaatcag
    10441 aataatgtgg accgataaaa aagccgattc tttaaagaat cggctttttt cataaaaaac
    10501 ggcttacagt gcgtctttca atgctttacc tgcacggaat ttaggcgttt tggcggcggc
    10561 aatggtcaga ggctcgccgg ttttggggtt gcggccttgg cgttccgcac gttcgcccac
    10621 gtagaaagta ccgaaaccga ccaaagtaac ggtgtcgcct tgtttcaggg cggtggttac
    10681 tgcattggta gtggcatcca aagctttttg tgcggcggct ttggaaatgt cggcttcttg
    10741 agcaatcgct tcgatcaatt cagacttgtt cacaatcagt cccttcctgt cttaaaaaat
    10801 gatgaaatgc ccgaatactc ggggtttgta ctgcttgagc aactttcgct ttatagcaat
    10861 tctgaaattg ccgtgtcaag caaaaaatac ggaatcaccc tatttgacag gctttcagga
    10921 cgaaaccgca tttttacaac acatttcctg cgtttcaatg tttggttgcc ctgctgcggg
    10981 gttttggttt tgaagcggat tccgccaccg cttccgcacc agaaggttct gcccaaggct
    11041 caggctggct ttccaaaccc agagccaata cctcgtctat ccatttgacc ggatggatgg
    11101 tcaggccggt tttcacgttt tcagggattt cttccaagtc tttgaagttg tcttttggaa
    11161 ttaaaacgtg tttgatgccg ccgcgaagcg cagccaacag tttttccttc agaccgccaa
    11221 tcggcaggac ttcgccgcgc agggtaattt cgcccgtcat cgctacatcg gcgcgtaccg
    11281 ggattttgga aaatgcagac accatcgcca aagtcatggc aatgcccgca ctcggaccgt
    11341 ccttcggcgt tgcaccttcg ggaacatgga catggatgtc ttttttctcg taaaaatcag
    11401 aagccaagcc cactgattcc gcgcgggagc ggacaaccga ccacgctgca gacacggatt
    11461 ccttcatcac atcgcccaac tggccggtgc actgaatcac gcccttaccc ggcaatgctg
    11521 cggcttcgac ggtcagcaat tcgccgccga cttctgtcca cgccagaccg gttacttgtc
    11581 cgatacggtt ttcgctttcg gcaacgccgt aatcgaagcg gcgcacaccc aaatagtcgt
    11641 gcagattttt ctcatttact ttaaccgctt taggtttggc tttgctggtt ttcttggttt
    11701 cagacaacct cttcttatct tcgtccaagg taatctgcat caccaccttg cggcagattt
    11761 tggcaatctc gcggtcgagc gaacgcacgc ccgcctcgcg ggtgtagtaa cggataatat
    11821 cgcgcaccgc gctttcttcg acgagcaatt cgccttcttt cacgccgttg cgcttcattt
    11881 gcttcggcac gaggtactgc atcgcgatat tgattttttc gtcttcggtg tagccggaca
    11941 gacggatgat ttccatacgg tcgagcagcg gggtcgggat attcaggctg tttgaagtcg
    12001 caataaacat cacatcgctc aaatcgtaat ccacttcggc ataatgatcg gcgaacttgt
    12061 tgttttgctc gggatcaagc acttcgagca acgcgctggc gggatcgccc cggaagtcgc
    12121 tacccaattt gtcgatttcg tcgagcagga acaatgggtt ttttacgccg gcttttgcca
    12181 tattctgcaa aatcttaccg ggcatggagc cgatataggt gcggcggtgt ccccggattt
    12241 cgctttcgtc gcgcacgccg cccaaagcca tgcggacata tttccgcccc gttgctttgg
    12301 cgatggattc gcccaaagag gttttgccca cgcctggagg gccgaccagg cacagaatcg
    12361 ggcctttgag tttgtccata cgtttttgga cggcgaggta ttccaaaatc cgttctttga
    12421 ctttttccag gccgtagtgg tcggtatcca gcaccaatcc ggctttggcg atgtctttgc
    12481 tgacgcggga ttttttcttc cacggcagtt cgagcagggt gtcgatgtag ttgcgtacga
    12541 cggtggattc ggcagacatc ggcggcatca ttttgagctt tttcagttcg gacaggcatt
    12601 tttcttccgc ttctttgctc atccccgcct ttttgatgcc tgcttccaag gcatccagtt
    12661 cgccgttttc gtcttcttcg cccaattctt tgtgtatcgc tttaatctgt tcgttcagat
    12721 aatattcgcg ctgggatttt tccatttggc gtttgacgcg tccgcgtatg cgtttttcgg
    12781 cctgcataat gtcgagttcg gattccagct gtgccagcag gaattccatc cgtttgccga
    12841 tttcgggaat ttccaaaatc tgttggcgtt gcgccagttt caactgcaaa tgcgctgcga
    12901 ccgtatcggt tagccggctg ttttcggcaa tgccgttgat gctgccgata atttcggcgg
    12961 ggattttttt attgagtttg gcgtattgtt caaactgcgc caacagggtg cggcgcacgg
    13021 cttcgaggtc ggtattgccg cccgtgtctt cttccacgac cgcctctata tgggaaacga
    13081 acagaccgcc cgtgtcttcg atggtcagaa cacgtccgcg atacagacct tcgaccaata
    13141 cttttaccgt gccgtccggc agtttcaata cctgtaagac ttgtgcgacg gtaccggtct
    13201 gatacaggtc ggcggcaacc ggttcttcta gcgccgcatc ggtttgtgcc aataggaaaa
    13261 ccggttcctc gcgggtaatg gcgttttcca gtgcggcgat ggatttcggc ctgccgacaa
    13321 acagcggcag aaccatatgc gggtaaacga cgacatcccg caaaggaagg gttgccaagg
    13381 cggcatattc ctcaaaatgc ttttcttttt gtgtcatagg tactctcttg tgtctgacag
    13441 attgccgatt ttcgcgtaca ttggggttga aggtattatt tcaagcatat gtggtttatt
    13501 tatggagttt gatgcgatgc cgtctgaaac attccggctt cagactgcat gggcttggaa
    13561 agacaaggcg ggaacaaaaa actgttctgt gttgccgctc cttgctgtac catccgtatg
    13621 gtttacggtt ctgccgccct attttcaaaa catgacgcag gtatcccatg tcttctttta
    13681 tttttcccga taacggggcc gaatggcgca acgaaagtgt gcaaaagccg cccaaaggtt
    13741 ggcattatgt ccgcgaaagc ggtgcagacg gcattttgaa ggctgcctat caaaatattg
    13801 caactgtctg gcagggcgat ttccacaatg ccaaacaggt gctttctgca atgaagaaga
    13861 gggctcgcaa acctgccgcc gtccgttccg atgcggatat cgccgccctt ttccatgccc
    13921 accgtatgaa gcaggcgcag cagagccgta ttctgaatat gcttgccgtt gaaatccgcc
    13981 ccggttttgt gttggacaac aaacgcgcgc ccgatatacg cgccgccctg ctcgacgtgt
    14041 acggagaggc ggacggcaaa ccgtttttcc tgccgctcaa tctgctgctg gggtttatgg
    14101 gtgcgcacga gtggcataag aaaggggttg ccgttccgca gctgggcggc agcatacacg
    14161 ttcctttcgg cgtattctcg ccgttgcgcg gcgaatacct cgacctgctc gcccatgcgc
    14221 cgtcaacggg ttttcagacg gcattcgata tcgggacggg ctcgggcgtg cttgccgcca
    14281 ttttggcgaa acagggcatt ccttccgtca tcggcacgga taccaatccg aaagccgtcg
    14341 cctgcgcccg tgccaatatt gcccgtttgg gctttgaaaa acaggttgag atacgggaaa
    14401 ccgatctgtt tcccgaaggg tttgccgatc tgattgtctg caatccaccc tggcttcccg
    14461 ccaagccgac ttccgccgtc gaatccgcgt tatacgaccc cgaatctgcg atgctggctg
    14521 cgtttttgcg ggatgcgccg aaacatctga atcccgacgg agaaatccgc ctgattattt
    14581 ccgaccttgc agagcatttg gggctgcgcc ctgccgattt tttggaaaag gcatttatcc
    14641 gggcgggttt gcgtgttgcc gatatgatga aaaccaagcc gaagcacaaa aaagccgcga
    14701 atccgagcga tccgcttgct tttgcgcgaa cccgggaaac cactttccta taccgtttga
    14761 aaaaggcata aggggcggcg gcgcggcatt cgggcggatt attcttgtga aaatacccgc
    14821 tcgagcatac tgcccaatgc cgtctgacgc gttttgacag tggcggcagc ttgccggaag
    14881 gtttcttctc cgccgaagaa tacgaacttc tccctcgcgc gggtaatggc ggtatataac
    14941 agctccttac tcaatccgga caatgcatcg tccccttcgt ccgaaggtgc ggcggaaggc
    15001 ggcagcagcc agacttcccg atattccgaa ccttggcttt tgtggacggt catggcgaat
    15061 gcgggttcga aatcgggcag gcagcttacc gctacctttt taaatccgtc cgcatcggca
    15121 aaataggcgg caaggctgcc ctgccgtccg acatcttcca taatcaatcc gatgtcgccg
    15181 ttgaacagtt caagcgcgta gtcgttctgt ctgatcataa tcggttctcc ggcgaaatag
    15241 gcctgatgtt ccggtatgtt cattttgcgg cgtacatggc tgcaataggc ttcgttgaag
    15301 tcttccgcat cctgccgcca agctgccagg accacgatat ccgagatgcc tgcgtatgcg
    15361 gcttcgatat tgccgtcttt taccgcctgc caataggctt tgtgcgcccg gtacaacctt
    15421 tcgactcgag cgttcggact gcattccgaa tgttccagtt cgtccggaaa ccggtcaaac
    15481 aatgcccacg ccccctcatc gcccgatacg gcggcacggg caaggcagcc gatgccactg
    15541 ttgtcgccga agcggtggct gaacgacaga tgggcggtgt tttgcgccaa cacgggcgga
    15601 tttgcgctga cgctgaaacc gtgttccgga aggaagccgg ccagcctttg gtgcgtttct
    15661 ccgtccaaaa cggttttgtg cgacaaaacg gacagcaccg ccccgattcc gacggacggg
    15721 agctggtttt catcccccag cagaatcacg cgcgcgccgg ttttgaccgc ttttaaaagt
    15781 tgcaacatca atgcggtatc caacatggag gcttcatcga taaccaatac gtccaacggc
    15841 agcgggtaaa cagggttgaa cgccgcctgc attttgggcg ggcgcagctt cagcagtcgg
    15901 tggacggttt gcccttccag tttgagcaaa tggcggcgga tggcctccgg cgcgtcaaaa
    15961 ccgttgattg cacggtgcag cgcgcgcgcc atatgtgccg ccgctttgcc tgtcggtgcg
    16021 gcaagcgcga tgttgggaag attttcgtct tcaccgcaaa tcagcgccag cagtttggca
    16081 accgttgtcg ttttgcccgt tcctggcccg ccggtaatca ccataaaaga ctgcaacagt
    16141 gccaaggcgg cggcatcgcg ctgcccttcg ctgcccgtgc cttgaaacca ttttgcgagg
    16201 ttttgccgcg cgcctgccgc gtcgggggcg gacgtgccgg ctgccgccaa gcgttttatc
    16261 tcggcagcca aatcgtattc caactgccac atcctgccca aaaacagcct tctgccttcc
    16321 aaaatcaaag gcgcggcgga tgttccgacc acgggtgcga gtgccgacag cgcgtcagcc
    16381 tcgccaccgc tcaaacggat aaacgaatga ccgttttgca atgcctgaaa caggcgttcg
    16441 gtgcagtttg caagcacttc gctgcctgaa cccgcatagc gtgccaaaaa ccagattgcc
    16501 gcccttgccg ccgcttgggc aaattcatct gtctgccgtt ccattgtatt ccttatccaa
    16561 atgccgtctg aaggcgtggg gcttcagacg gcgcggtgtt gtttcggctg tttaggcgtt
    16621 tgcgccctgt ttggggtgca ggctgccgtc tttcatgacc atcacgcgct cgaagcggcc
    16681 ggcgagttcg tcgtcgtgcg ttacgaccac cagccccgtt cccaattctg ttttcagttc
    16741 cagcatcata tccaaaacat tcctggcgtt cgcacgatcg agattgccgg tcggttcgtc
    16801 ggcaagcagg catttgggtt gcgtaaccaa ggcgcgtgca atggcggcac gctgccgctc
    16861 accgccggac agttcgcccg cgcggtgcgc cgaacggtgc ttcaatccga ccttttccag
    16921 catcgccatt gccgtttctg ccgcctcttc ccgttttttc ttgccgatca gaagcggcat
    16981 catcacgttt tccagtgccg aaaattcagg cagaagatgg tggaactggt acacgaaacc
    17041 gagatggcgg ttgcgcagga tgcccagttg tcgctggctt aatgtacgca aatcctcgcc
    17101 catcagcagc accctgcctt cagacggcat atccagcccg cccaaaatat gcagcagcgt
    17161 cgatttgccg ctgcccgaag aaccgatgat gccggtactt tcccccgcga ggatttccaa
    17221 atccaagccg tgcagcaccc gaacgtccaa accgccgtca cggtagcgtt tgcccacgcc
    17281 ttcgcatttc aaaatcaact cactcataac gcaaagcctc cgccggttgg gtttttgacg
    17341 cgcgccagct cgggtagagc gtcgccacga aagacagtcc caaagaaatg caggcaatca
    17401 gggcaacgtc gcccatatcg acatcgctgg gcaggtagtc gataaaataa acctgcgaat
    17461 tgataaggtg gacaccgagc aggttttcaa aaaacgccac gactctgccg acgttccaac
    17521 ccaaaagcac gccgcagacc acacccgcca gcgtgccgaa aaagcctgaa aacgcgccct
    17581 gcaccataaa aatcttcatc acgccggcag gggaaagacc caaagtccgt aaaatcgcaa
    17641 tgtccgcctg cttttccgta accgccatca ccaaggaaga gacaaggttg aacgccgcca
    17701 cggcgataat cagcgtcagg atgatgaaca tcatccgttt ttccaactcg accgcctcaa
    17761 aatagcttcg attgctgaac gtccaatcgc gcacccaaac cgtatccctt tgcgcctccg
    17821 gaatcagctt tgccgtcaag gcgggggcgt tttgcgggtc ggcgagtttc agccgcagcc
    17881 ccgcaacttc cttatccaag cggtacagta cgcgcgcgtc ttggatatgc gtcatcgcca
    17941 aggagttgtc cacttcgtaa acacccgtct taaccagacc gaccacggta aactgtttca
    18001 acctcggtac gactccggcg ggcgtaacat tgccctccgg cgtgatgacg gtaactttat
    18061 tgccgacttc cgcccccaaa gcctccgcca agccgacacc gaggataatg tcaaactcgc
    18121 ccggaatcag gtcttcaaat ttgcctgccg gcattttgtc gccgtattcc accactttgc
    18181 gctcttcaga cggcaaaatg ccgcgcatct gcacgcccct gatttcgccc gcattggcca
    18241 gcaatgcctg attggaaaca tagggcgcgg cagccaaaat acctttgcgg ttttcggtaa
    18301 atcgaagcag gttgcgccaa tccgtatccg tattgtcgat atagccgatt tcggcgtgcg
    18361 gcgcgacatt caggagctgc ccgcgtattt ctttctgaaa gccgttcata accgacaaga
    18421 cgacaatcag cgcggttacg cccaaggcga ttccggcaat cgaaaccatc gtgataaacg
    18481 acataaagcc gttgcgcttt ttcgccctga gatacctcaa gcctatccaa gcctctagag
    18541 aaaacataac gctaccttaa aaatgtctgc aaacgtgccg ccccggacgg cggtttgggg
    18601 gcggcggcaa aagtttattg taccgtaaaa cccaggcagc gtccgaacgc ccgagtgcgg
    18661 gggacggggc ggcagagcgg gcggaaaact tgcacaacgc gtcaaactgc cctatccttt
    18721 ccttcagaaa aaccgtttct tgaggaaaac aatgaatatc cgaactgctt ttgctttgtg
    18781 cgccatcgcc ttatccgccg ctgcggctgc ctacgccaaa gaaatcaaaa tcgatgccaa
    18841 caacacgcct tattccgaag ccgacgcgca aaagctggcg gcaacggcag tcggtatggg
    18901 tgttaaggaa cctatcagcc tgaacggcgg cagcggcagc attaccgtgt ccggcagcag
    18961 cgcgacgcag tgcgtgttca aagtcggcaa cggaggcgca ttgcagattc aagggctaaa
    19021 ctgcaagtaa accgcccgga aaaatgccgt ctgaaggctt cagacggcat tttgcattgg
    19081 cggcgttatg ccccgccttc tttaatcagg cggcgttcgt acaccgcctg cgccagcgtt
    19141 cccgcatcga catattccaa ttcgccgccc aaggggatgc cctgcgacag cctgctgact
    19201 ttgtaaggca ggtttttaaa aaactcggac aggacatacg ccgtcgcatt gccttctgcg
    19261 gtaaaagcgg ttgcaataat gatttcttcg acttccccgc cgcccagccg ttgcgccagc
    19321 ctgtccaatg cgatggcgga tacgtccatt cccaatgccg tattgatttg ccccatcagg
    19381 acgaaataca gcccgtcgtg gcagtttgcc acttccatat tcgacacgtc ggcaggcata
    19441 tgcaccacca tcagccgccg cccgtcgcgt gtttcatcgg cacaaatatc gcacaatccg
    19501 ccttcgcaaa acgtgttgca catcgcgcaa tggtgaacct gcttcaatgc cgtctgcaag
    19561 gcatccacca gtttttcagc ctctttgcgc ttgtgttgga gcaaatgata cgctatccgc
    19621 tgtgccgatt tcggcccgac gttgggtaaa accttcagcg cgtcgatcaa tccttggaag
    19681 gcatcttgtt ttttgtggct catcatattc cgccgtatgg gaaaacggcc ggaatattcc
    19741 gaccgttatt ttgtcaacaa aagtgtcaat tactgaccgc cgccgttgtc gaccgattgc
    19801 gctcctttgg tctgtttgat tttgccgttg aaataacgta tcaacaagtc gaaggtattg
    19861 gcagactgct gctgcgccaa agcctgtttt gcaagcggaa gctgtgcggc gatatcatcc
    19921 ggcggggtta tagcctgtac ttcgacaatc acgggtgccg gcagaccggt cagcctgacg
    19981 taggcgggtt tgccgtttgt cggttttgct ttcagcagtt ccgcataagc ctcgggcggc
    20041 atggactgcc ttgcctgctg cgcgcccaaa acggacactt ccgaccattt cacatcaact
    20101 gccttgccgc cgttcagttg ggtaagcacg tcttttgcct tgttttcggc aagtttggcg
    20161 gcttcggcac ggatataagc ctgacgcacc gcatctttgg cttcggcaaa cggcagggtt
    20221 ttctcttcgc ggacttcttt ggcgcggacg acccacgcga tttcattatt gatagacaac
    20281 acttcggaat tgtgtttttt cttcaatacg tcgtcgctga atatggcatt gatcaggttt
    20341 tcaggcagtc cggacatttg cgcgtcctgc ctgctcagcc aagtttcttg ggtttcgact
    20401 ttcaaactgc tgtttttggc ggcttcggca agcgaagcgg gatggttgaa cgcgtcatcg
    20461 ctcagctttt cttttgcctt attgaagtcg gcaaccgcct ttttcatttt caattcgttt
    20521 tcgacggcgg ctttttcctg ctcgaaagaa agtttggctt catttgccgg caaacgcgcc
    20581 acgcgctctt caaacgcatt tttcacttcc gtttcactga cggtttgctt gtctgcaaaa
    20641 tccttcagat tcaaggcgac atattccaat ttgaccgcct gcggcagcag atagtctttt
    20701 ttgttcgcat tataaaattt ctgcaaatcg gcttcagaca ctttgacttg ggcgatgaac
    20761 tcgtcggggt tgaaagtgtg cgaacggatg gtgcggttga cctgcgtcag cctgatcagc
    20821 tgttccgcct gcgcgtcgcc gaccaatacg ccgttttgga cgaggtttac caaattctgc
    20881 aaggcaaact gatcgcggat ttcttcgaca aactggtctt cagacatatg gcgttgggaa
    20941 aggtagcggt ttaaaagcgc gtggtcgaat ttgccgtttg cgtcgtggaa attgggatcg
    21001 tccacgataa tttgcttgat ttgttcggaa gaaaccgaaa tgcctaacag cttcgcgccc
    21061 tgtttcaggt aggcgcgttg cagcagggat tggaacaccg cgtcgcgcga agggccgccg
    21121 ccgtccgcct gttcgttctg tatggcgttg ttgatggagt ggtcgctgat tttttcgtcg
    21181 cccacttgga cgatgtagtc ggcacccgga tgggataccg tgctgacccc gaagccgacg
    21241 aaggttaatg caatcaggcc caaaaggact tgggcgggcg ttctgtattt ttcgatggaa
    21301 tggaacatat tttaaatcgg gatatagaat gggaaattca agtcgggtat tgtaacggtt
    21361 tttatccctg tctgcacggg gcttgccggt tgaagatgcc gtcgtaggtt tcttcgctga
    21421 agccggcgta aaccttgccg ccgcactcca atacgggacg cttgatcagg ctcggcattt
    21481 cggacatcag tttgacggcc tccgctgtcg aggacagggc tttttgctgt gtttcggcat
    21541 cgagtttgcg ccagcttgtc ccgcgtttgt tgagcagggt ttccaaaggc acttgttcca
    21601 gccacgagca gatttccgct tcagacggca tctgtttttt gaaatcccga aactcaaact
    21661 ccaagccgta tccggcaagt cggtttttgg cttttttgac cgtatcgcaa tttgggatgc
    21721 cgtgaaggac tatcatttgg aaaccttttg tctgaaataa taaaacggat attttactat
    21781 aagtgtctga aaatttgccc gtctgtttca gacggcgggg cggttatgtt acaatccgaa
    21841 aattcgaaaa atttaatctc ttgttcaata aaggctttac caatcatgat ttctaccaac
    21901 ggcatcacca tgcagttcgg cgcgaagccg ctatttgaaa acgtatccgt caaattcggc
    21961 gaaggcagcc gctacggttt gatcggcgcc aacggctcag gcaaatccac cttcatgaaa
    22021 atcctcggcg gcgatttgga acagaccgcc ggtgaagtcg caattgaaaa cggcgtgcgt
    22081 ttgggtaaat tgcgccaaga ccagtttgcc tacgaagaca tgcgcgtgct ggacgtggtg
    22141 atgatggggc ataccgaaat gtgggcggcg atgaccgaac gtgatgcgat ttacgccaat
    22201 cccgaagcca ccgaagacga ctacatgaaa gccgccgaac tggaagccaa gttcgccgaa
    22261 tacgacggct acaccgccga agcgcgtgcc gccgaactgt tgagcggcgt gggcatttcc
    22321 gaagatttgc acaatgcgaa aatggcggaa gtcgccccgg gcttcaaact gcgcgtattg
    22381 ctggcgcaag ccctgttctc caagccggat gtgctgttgc ttgacgaacc gaccaataac
    22441 ttggacatca acaccatccg ctggctggaa ggcgtgttga accaatacga ctccaccatg
    22501 atcatcatct cgcacgaccg ccactttttg aacgaagtct gcacccacat ggcggatttg
    22561 gactacaaca ccatcaccat ctatcctggc aactacgacg actacatgct cgcttccgcc
    22621 caatcgcgtg agcgcgccct gaaagacaac gccaaagcca aagagaaact gcaagagctg
    22681 caagagttcg tcgcacgctt ctctgccaac aaatccaaag cccgtcaggc aaccagccgt
    22741 ctgaaacagg ccgacaaaat caaatcggag atggtcgaag tcaaaccttc cacccgtcaa
    22801 aacccgtata tccgttttga agccgatgaa aaagccaagc tgcaccgtca ggctgtggaa
    22861 gttgaaaaac tggcgaaacg ctttgaaacc cagttgttta aaaacctgaa cttcatcctt
    22921 gaagcgggac aacgcctcgc catcatcggc ccgaacggcg cgggcaaatc caccctgctg
    22981 aaactcttgg ccggcgcgta caaccccgaa tattcagacg gcctgttacc ggacgaaggc
    23041 agcatcaaat gggcggaaaa agccagtgtc ggctactatc cgcaagacca tgaaaacgac
    23101 ttcgacgtcg atatggattt gagcgaatgg atgcgccaat gggggcagga aggcgacgac
    23161 gaacaagtca tccgcggcac tttggggcgt ttgctcttcg gcagtaacga tgtcgtgaaa
    23221 aaagtgaagg ttctctccgg tggtgaaaaa ggccgtatgc tttacggcaa actgttgctg
    23281 ttgaaaccca atgtcttagt catggatgaa ccgaccaacc acatggacat ggaaagcatc
    23341 gaatccttga acatggcgct ggaaaaatac aacggcacgc tgattttcgt ctcgcatgac
    23401 cgtcagtttg tatcttcatt ggctacccaa atcatcgaat tggacggtaa aggcggatat
    23461 gaacactact tgggcgatta cgaaagttac ttggagaaaa aaggcgtagc ataagcgcac
    23521 aaaataccct ccggttgaaa caatgccgtc tgaagccgct tcagacggca ttgttgataa
    23581 ctttaaaata ggaagcatat gcagacttac ctcgtcggcg gcgccgtccg cgattatctt
    23641 ttgggcttgc ccgtcaaaga ccgcgattgg gtggtcgtcg gcgcagacgc acaaaccatg
    23701 ctggcgcaag gcttccagcc agtcggcaaa gactttcccg tgtttctcca tcccgaaaca
    23761 cacgaagaat acgccctcgc ccgcaccgag cgcaaaaccg ccaaaggtta cgccggcttc
    23821 agtttccaca ccgacaaaga cgttacgctg gagcaggatt tgatgcgccg cgacctgacc
    23881 atcaacgcga tggcgcaaga tgcggacggc aagattatcg accctttcgg cggacaacgg
    23941 gatttggcgg caggcatttt gcgccacgtt tccccggcct tcgccgaaga ccccgtccgc
    24001 atcctgcgta ctgcccgctt tgccgcgcgt tacaagtttg aaatcgccga agaaaccata
    24061 aagctgatgc ggcagatggt ggaaaacggc gaagcggacg cattggttgc cgaacgcgtc
    24121 tggcaggagt ttgcgaaagg tttgatggaa aaaaatccgc gcaaaatgat tgaagtgttg
    24181 cgcgaatgcg gcgcgctcaa agtcttgctg cccgaagtca atgccctctt cggcgtgccg
    24241 caacgcgccg actaccatcc cgaaatcgac agcggcatcc ataccctgat gacgctgcaa
    24301 cgcgccgccg atatgggttt gagcctgccc gaacgctatg ccgccctgct gcacgacttg
    24361 ggcaaagcca aaacaccgtc cgacatcctg ccgcgccacc acggacacga cctcgccggt
    24421 gtcgaacccg tgcgcgaagt caatcagcgg ctgcgtgcgc cgaaacattg cgccgagctt
    24481 gccgaacttg tctgccgttg gcacattatt ttccaccaag tcggacagct taaaagccaa
    24541 accattctga acgttttgaa aaaaaccgac gctttcagac gccccgaacg ctttcagacg
    24601 gcattgaacg tctgcattgc cgacacgcaa ggccgtctga accgcgaaca cacgccctac
    24661 ccgcaacgcg cgcactggct cgccttactc gaagccgcca atcaggcgga ttcgggcaaa
    24721 atcgccgccg aatgccgctc gcagggaaaa gcgcacctta tcgccgaaca aatcgaccgg
    24781 gcgcggctgg cacaaatcgc cccattgcaa aaagcgtttc gagcggcgca agacaaaaca
    24841 gaaaaacatt aaaacgtcca atgcagcca
//
LOCUS       DAWITQ010000011        24211 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.011, whole genome shotgun sequence.
ACCESSION   DAWITQ010000011 DAWITQ010000000
VERSION     DAWITQ010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 24211)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24211)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24211
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.011"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(134..283)
                     /locus_tag="WIX18_000416"
     CDS             complement(134..283)
                     /locus_tag="WIX18_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237573.1"
                     /translation="MPSETLLSVSDGILTNTVRRRKTAVFSCVSYADVSTHRTIQKAS
                     PYVPS"
     gene            complement(301..498)
                     /locus_tag="WIX18_000417"
     CDS             complement(301..498)
                     /locus_tag="WIX18_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237574.1"
                     /translation="MNTVPKSRIPVKPLPEKTTDEAKVEKWRQLGAEHGLSGEWAVAA
                     RLGENGFTEEQMENIANLFGR"
     gene            complement(509..1525)
                     /locus_tag="WIX18_000418"
     CDS             complement(509..1525)
                     /locus_tag="WIX18_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1311 domain-containing protein"
                     /protein_id="HEZ5237575.1"
                     /translation="MYRKLIALPFALLLAACGREEPPKALECANPAVLQGIRGNIQET
                     LTQEARSFAREDGRQFVDADKIIAAAYGLAFSLEHASETQEGGRTFCIADLNITVPSE
                     TLADAKANSPLLYGETALSDIVRQKTGGNVEFKDGVLTAAVRFLPVKDGQTAFVDNTV
                     GMAAQTLSVALLPYGVKSIVMIDGKAVKKEDAVRILSGKAREEEPSKPTPEDILEHNA
                     AGGDADVPQAAEGAPEPEILHPDDGERADTVTVSRGEVEEARVQNQRAESEITKLWGG
                     LDTDVQKELVGEQRKWAQEKISNCRQAAAQADRQEYAEYLKLQCDTRMTRERIQYLRG
                     YSID"
     gene            complement(1624..2838)
                     /gene="gltS"
                     /locus_tag="WIX18_000419"
     CDS             complement(1624..2838)
                     /gene="gltS"
                     /locus_tag="WIX18_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HEZ5237576.1"
                     /translation="MEWEFNSYYTLIAATLVLLVGKFLVQKIKFLRDFNIPEPVAGGL
                     VAAIILFALHEAYGVSFKFEKPLQNAFMLIFFTSIGLSADFSRLKAGGLPLVVFTAIV
                     GGFILVQNFVGVGLATALGLDPLIGLITGSVSLTGGHGTSGAWGPNFETQYGLVGATG
                     LGIASATFGLVFGGLIGGPVARRLINKMGRKPVENKKQDQDDNADDVFEQAKRTRLIT
                     AESAVETLAMFAACLAFAEIMDGFDKEYLFDLPKFVWCLFGGVVIRNILTAAFKVNMF
                     DRAIDVFGNASLSLFLAMALLNLKLWELTGLAGPVTVILAVQTVVMVLYATFVTYIFM
                     GRDYDAAVLAAGHCGFGLGATPTAVANMQSVTHTFGASHKAFLIVPMVGAFFVDLINA
                     AILTGFVNFFKG"
     gene            complement(3056..4462)
                     /locus_tag="WIX18_000420"
     CDS             complement(3056..4462)
                     /locus_tag="WIX18_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HEZ5237577.1"
                     /translation="MTAAPDILYRQAAALLEQSNTAQALPLLQQAAEQGYAEAAFVLG
                     NHLLQNGQPEQALSWLEAAAAQRHPKALFSLLQQREHNGTPTGQLLNDYAWLGEQGHS
                     EAQLILMRYHAQRNDPQSLYWAELAAARYAAPAYYHLARHHQRQGDVETAIEQYEKAA
                     ALGVTAACWQLGQIYFYGTGVSLNHAQAEHYLEPAAQAGHIAAQTLLADLLAAQRKPE
                     ALEWYRRAADKEQAEAQSKLAQYALTGELSERDPFQAARYAKAAAEKNHPEALKIMGD
                     LYRYGLGIKADNHIAQDYYHRAAALGSAAAAQKLISDAALYHPQQYEQIKTAALQQQQ
                     TETIYRLAEAQACAIGRPADYNAARKNYMEAAGFHHKNAAAALGRIYHYGLGTAQDPR
                     AAAHWYAIAAEQNHPSAQYHLACFYYHGQGIGCHVPTACYWLQAAISNGHTSAESLIS
                     LLEQWRREAHHAIGQKAV"
     gene            complement(4831..6090)
                     /locus_tag="WIX18_000421"
     CDS             complement(4831..6090)
                     /locus_tag="WIX18_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HEZ5237578.1"
                     /translation="MKQTVLKNNLQNLLESAENILLLQGPVGDFFLRLADWLTANGKT
                     VHKFNFNAGDDYFYPPTQAHTVVFNDNYDAFPEFLQEYITQHHIQAVVCFGDTRPYHV
                     IAKRIANENQASFWAFEEGYFRPYYITLEKDGVNAFSPLPRRADFFLEQFPKLAQQEY
                     KAPTPVHGGFTPMAKNAIRYYIELFRNPRKYPDYIHHRAPNAGHYLKPWSLSILKRLN
                     YYIEDIQIAKRVEAGKYGKFFIVPLQVFNDSQVRIHCDFPSVRSFLLHVLSSFAEHAP
                     ADTNIIIKHHPMDRGFIDYWRDIKRFIKEHPELKGRVIYVHDVPLPVFLRHGLGMVTI
                     NSTSGLSGLIHNMPVKVLGRAYYDIPGITDQNTLAEFWNHPTPPDKELFHAYRMYHLN
                     VTQINGNFYSQVFFPNKNTSDSSTPTT"
     gene            complement(6227..8275)
                     /locus_tag="WIX18_000422"
     CDS             complement(6227..8275)
                     /locus_tag="WIX18_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HEZ5237579.1"
                     /translation="MIPAYIPLRSFGIRKIPNITQFLPEYSLNKTVFNAQTIIGWGLR
                     PTTHQARAFAQSHGLPFVALEDGFLRSLGLGVAGYPPFALVYDDIGIYYDTTRPSRLE
                     QLILAANMPSEMLNQAQQAIDLILTHRLSKYNHALDFSDGLVQDSKNIVLVIDQTFGD
                     MAIQYGGADEATFRQMFQTALAENPDAEIWVKTHPDVLSGKKQGYLTDLAQQPRVRLL
                     AEDINPISLLQAVDKVYCVTSQMGFEALLCGKPLVTFGLPWYAGWGVSDDRHPKIDSL
                     VQTQRRAPRNLLQLFAAAYLQYSRYLNPNTGEAGSLFDVIDYLATVKRKNDKLRGELY
                     CVGMSLWKRAVAKPFFNVPSCRLKFISSTQKLAGVKLSDDARILAWGNGKEAIVRFAE
                     QHHIPLLRMEDGFIRSVGLGSNLVPPLSLVTDDMSIYFNAETPSRLEYILQNQNFDDQ
                     DFQTALKLQKMLTENHISKYNVGSSDFTAPSTDKTVILVPGQVEDDASIRYGSPQIYR
                     NLDLLRTVRERNPNAYIIYKPHPDVVSGNRIGHISPEDAARYADQTAEQTDILTCLQY
                     ADEVHTMTSLTGFEALLRGKKVSCYGLPFYAGWGLTQDLLPIPRRSRRLELWQLIAGT
                     LIHYPDYIHPETHQAINAETAAQILIRQKNMQKNNNGLHRGYFAKKLGKIKQLYRSFK
                     "
     gene            complement(8437..8976)
                     /gene="rfbC"
                     /locus_tag="WIX18_000423"
     CDS             complement(8437..8976)
                     /gene="rfbC"
                     /locus_tag="WIX18_000423"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003761465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HEZ5237580.1"
                     /translation="MNIIDTRIPDVKLLEPKVFGDERGFFMETFRDEWFRQNVAERTF
                     VQENHSKSTQGVLRGLHYQTENTQGKLVRVVSGEVFDVAVDMRRDSPTFGHWVGEVLS
                     ADNKRQLWVPEGFAHGFYVLSDEAEFVYKCTDYYNPNAEHSLIWNDATVGIDWPLLGE
                     PSLSAKDLAGKMLAEAATF"
     gene            complement(9031..9906)
                     /gene="rfbA"
                     /locus_tag="WIX18_000424"
     CDS             complement(9031..9906)
                     /gene="rfbA"
                     /locus_tag="WIX18_000424"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HEZ5237581.1"
                     /translation="MKGIILAGGSGIRLYPITRGVSKQLLPVYNKPMIYYPLSVLMLA
                     GIRDVLVITTPEDNDAFRRLLGDGSDFGIQISYAIQPSPDGLAQAFLIGEEFIGDDSV
                     CLVLGDNIFYGQHFSQSLKEAAASVETKGATVFGYQVKDPERFGVIEFDENFKALSIE
                     EKPKQPKSDWAVTGLYFYDNRVVEFAKQVKPSERGELEITTLNQMYLDDGSLNVQLLG
                     RGFAWLDTGTHASLLEAASFVETIENIQNLQVACLEEIAWRNGWLSSEEIRNLAKPMC
                     KNEYGRYLLRLVGKD"
     gene            complement(10119..11195)
                     /gene="rfbB"
                     /locus_tag="WIX18_000425"
     CDS             complement(10119..11195)
                     /gene="rfbB"
                     /locus_tag="WIX18_000425"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HEZ5237582.1"
                     /translation="MQTANKKTILVTGGAGFIGSAVVRHIIRNPRDAVVNVDKLTYAG
                     NLKSLTEVADNPRYAFEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIDSAGEF
                     IQTNIIGTFNLLEAARAYRRQMPSEQREAFRFHHISTDEVYGDLHGTDDLFTETTPYA
                     PSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKP
                     LPVYGDGMQIRDWLFVEDHARALYQVVTEGEIGETYNIGGHNEKANIEVVRTICALLE
                     ELVPNKPQGVARYEDLITYVKDRPGHDVRYAIDAAKIGRELGWQPQETFESGIRKTVE
                     WYLNNQTWWSRVLDGSYNRERLGS"
     gene            complement(11196..11852)
                     /gene="galE"
                     /locus_tag="WIX18_000426"
     CDS             complement(11196..11852)
                     /gene="galE"
                     /locus_tag="WIX18_000426"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEZ5237583.1"
                     /translation="MAFTLMRRAMIRKMPYTEDMRPGDTANPYGASKAMVERMLTDIQ
                     KADPRWSVILLRYFNPIGAHESGLIGEQPNGIPNNLLPYICQVASGRLPQLSVFGGDY
                     PTPDGTGMRDYIHVMDLAEGHIAAMKAKGGVAGVHLFNLGSGRAYSVLEIIRAFEAAS
                     GLNIPYQIQPRRAGDLACSFADPSHTKQQTGWETKRGLKQMMEDSWRWVSRNPNGYGD
                     "
     gene            complement(11898..12239)
                     /locus_tag="WIX18_000427"
                     /pseudo
     CDS             complement(11898..12239)
                     /locus_tag="WIX18_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228843.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
     gene            complement(12252..13232)
                     /gene="dcm"
                     /locus_tag="WIX18_000428"
     CDS             complement(12252..13232)
                     /gene="dcm"
                     /locus_tag="WIX18_000428"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEZ5237584.1"
                     /translation="MHTPLTYIDLFSGAGGLSLGFEQAGFQQLLSVEMESDYCQTYRT
                     NFPHHQLLQKDLTTLTEQDLINCLNGQAVDLIIGGPPCQGFSMAGKIGRTFTDDPRNH
                     LFKEFVRIVKIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQNIGYSVECKILSAADF
                     GVPQIRSRVIFIGRRDKGKISFPEPLQISHQTVGSAIGHFPKLAAGESNPHVANHEAM
                     NHSAQMLEKMAFVKNGGNRNDIPEPLRPKTGDIRKYIRYNSNKPAVCITGDMRKVFHY
                     EQNRALTVRELAALQSVPDNFIFVAAKLPSSSRLVTPYRLYWQKLLLKVF"
     gene            complement(13263..15536)
                     /locus_tag="WIX18_000429"
     CDS             complement(13263..15536)
                     /locus_tag="WIX18_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HEZ5237585.1"
                     /translation="MNITQILSQELSATAAQITAAVELLDDGATVPFIARYRKEATGG
                     LDDTQLRRLAERLQYLRELEERKAVVLKSIEEQGKLSDDLRAQIEAADNKTALEDLYL
                     PYKPKRRTKAQIAREHGLQPLADVLLAEQSQDVEAAAQGYLNENVPDAKAALDGARAI
                     LMEQFAEDAELIGTLRDKLWNEAEIHAQVVGGKETEGEKFSDYFDHREPIRAMPSHRA
                     LAVLRGRNEGVLNIALKYQPDDTPITQQSEYEQIIARRFKVSDGHKWLRDTVRLTWRA
                     KIFLSLELEALNRLKEAADTDAITVFARNLKDLLLAAPAGRLTTLGLDPGYRNGVKCA
                     VVDDTGKLLDTVIVYLHQENNMLATLSRLIKQHGVKLIAIGNGTASRETDKIAGELVR
                     EMSKMGLHKIVVSEAGASIYSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKID
                     PKSIGVGQYQHDVNQSRLAKSLDAVVEDCVNAVGVDVNTASAPLLARISGLNQTLAQN
                     IVAYRDENGAFDSRKKLLKVPRLGEKTFEQAAGFLRINGGKEPLDASAVHPEAYPVVA
                     KMLAQQGINAAELIGNRERVKQIKASDFTDERFGLPTILDILSELEKPGRDPRGEFQT
                     ASFAEGIHEISDLQVGMILEGVVSNVANFGAFVDIGVHQDGLVHISALSNKFVQDPRE
                     VVKAGDVVKVKVLEVDAARKRIALTMRLDDEPGGAKHKMPSENRSRERTAGRKPQRND
                     RAPANSAMADAFAKLKR"
     gene            complement(15600..16250)
                     /locus_tag="WIX18_000430"
     CDS             complement(15600..16250)
                     /locus_tag="WIX18_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ5237586.1"
                     /translation="MISVEHVSKRYLTRQGWRTVLHDISFKMEKGEKIGILGRNGAGK
                     STLIRLISGVEPPTTGEIKRTMSISWPLAFSGAFQGSLTGMDNLRFICRIYNVDIDYV
                     KNFTEEFSELGQYLYEPVKRYSSGMKARLAFALSLAVEFDCYLIDEVIAVGDSRFADK
                     CKYELFEKRKDRSIILVSHSHSAMKQYCDNAMVLEKGHMYQFEDMDKAYEYYNSLP"
     gene            complement(16247..17044)
                     /locus_tag="WIX18_000431"
     CDS             complement(16247..17044)
                     /locus_tag="WIX18_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_157140410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEZ5237587.1"
                     /translation="MKALHKTSFWESLAIQRRVIGALLMREIITRYGRNNIGFLWLFV
                     EPLLMTFVIVLMWKFLKADRYSTLNIVAFAITGYPMLMMWRNASKRAVGSISSNASLL
                     YHRNVRVLDTILARMILEIAGATIAQIVIMAVLIAIGWIEMPADMFYMLMAWLLMAFF
                     AIGLGLVICSIAFNFEPFGKIWGTLTFVMMPLSGAFFFVHNLPPKVQEYALMIPMVHG
                     TEMFRAGYFGSDVITYENPWYIVLCNLVLLLFGLAMVSKFSKGVEPQ"
     gene            complement(17044..18207)
                     /gene="ctrB"
                     /locus_tag="WIX18_000432"
     CDS             complement(17044..18207)
                     /gene="ctrB"
                     /locus_tag="WIX18_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide export protein CtrB"
                     /protein_id="HEZ5237588.1"
                     /translation="MSEQLPVAVATETKAERKKPKKKSWIKKLSPLFWVTVIIPTVIS
                     LVYFGFFASDRFTSQSSFVVRSPKSQSSLNGLGAILQGTGFARAQDDIYTVGEYMRSR
                     SSLDELRKILPVREFYETKGDVFSRFNGFGFRGEEEAFYQYYKNQVMINFDTVSGIST
                     LNVTSFDALESKKINEALLKQGEALINQLNDRARADTVRYAEEVVKTAAERVKEASQN
                     LTDYRIANGVFDLKAQSEVQMGLVSKLQDELIVIQTQLDQVKAVTPENPQIPGLQARE
                     QSLRKEIDQQLRAISGGGHSSLSNQAAEYQRVYLENQLAEQQLAAAMTSLESAKVEAD
                     RQQLYLEVISQPSLPDLAHEPKRLYNIVATLIIGLMVYGILSLLTASIREHKN"
     gene            complement(18222..19397)
                     /gene="ctrA"
                     /locus_tag="WIX18_000433"
     CDS             complement(18222..19397)
                     /gene="ctrA"
                     /locus_tag="WIX18_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide export outer membrane
                     protein CtrA"
                     /protein_id="HEZ5237589.1"
                     /translation="MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSE
                     VQIPEVELIDVNHTVAQLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAV
                     LFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKK
                     MANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNV
                     QLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSAR
                     GLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVY
                     RVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFSPVTSGVNSINNLTN"
     gene            19532..20665
                     /gene="neuC"
                     /locus_tag="WIX18_000434"
     CDS             19532..20665
                     /gene="neuC"
                     /locus_tag="WIX18_000434"
                     /EC_number="3.2.1.183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (hydrolyzing)"
                     /protein_id="HEZ5237590.1"
                     /translation="MKRILCITGTRADFGKLKPLLAYIENHPDLELHLIVTGMHMMKT
                     YGRTCKEVTRENYQHTYLFSNQIQGEPMGAVLGNTITFISRLSDEIEPDMVMIHGDRL
                     EALAGATVGALSSRLVCHIEGGELSGTVDDSIRHSISKLSHIHLVANEQAVTRLVQMG
                     EKRKHIHIIGSPDLDVMASSTLPSLEEVKEYYGLPYENYGISMFHPVTTEAHLMPQYA
                     AQYFKALELSGQNIISIYPNNDTGTESILQELLKCQSEKFIAFPSIRFEYFLVLLKHA
                     KFMVGNSSAGIREAPLYGVPSIDVGTRQSNRHMGKSIIHTDYETKNIFDAIQQACSLG
                     KFEADDTFNGGDTRTSTERFAEVINNPETWNVSAQKRFIDLNL"
     gene            20669..21355
                     /gene="neuA"
                     /locus_tag="WIX18_000435"
     CDS             20669..21355
                     /gene="neuA"
                     /locus_tag="WIX18_000435"
                     /EC_number="2.7.7.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acylneuraminate cytidylyltransferase"
                     /protein_id="HEZ5237591.1"
                     /translation="MEKQNIAVILARQNSKGLPLKNLRKMNGISLLGHTINAAISSKC
                     FDRIIVSTDGGLIAEEAKNFGVEVVLRPAELASDTASSISGVIHALETIGSNSGTVTL
                     LQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPMEHHPLKTLLQINNGEYAPMRHLSD
                     LEQPRQQLPQAFRPNGAIYINDTASLIANNCFFIAPTKLYIMSHQDSIDIDTELDLQQ
                     AENILNHKES"
     gene            21356..22405
                     /gene="siaC"
                     /locus_tag="WIX18_000436"
     CDS             21356..22405
                     /gene="siaC"
                     /locus_tag="WIX18_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysialic acid capsule biosynthesis protein
                     SiaC"
                     /protein_id="HEZ5237592.1"
                     /translation="MQNNNEFKIGNRSVGYNHEPLIICEIGINHEGSLKTAFEMVDAA
                     YNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVES
                     KGMIFISTPFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSI
                     ESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHTLD
                     NYACLGAVALGGSILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGGKKD
                     TIIAGEKPTKDFAFASVVADKDIKKGELLSGDNLWVKRPGNGDFSVNEYETLFGKVAA
                     CNIRKGAQIKKTDIE"
     gene            22489..23976
                     /locus_tag="WIX18_000437"
     CDS             22489..23976
                     /locus_tag="WIX18_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2,8-polysialyltransferase family protein"
                     /protein_id="HEZ5237593.1"
                     /translation="MLKKIKKALFQPKKFFQDSMWLTTSPFYLTPPRNNLFVISNLGQ
                     LNQVQSLIKIQKLTNNLLVILYTSKNLKMPKLVHQSANKNLFESIYLFELPRSPNNIT
                     PKKLLYIYRSYKKILNIIQPAHLYMLSFTGHYSYLISIAKKKNITTHLIDEGTGTYAP
                     LLESFSYHPTKLERYLIGNNLNIKGYIDHFDILHVPFPEYAKKIFNAKKYNRFFAHAG
                     GISINNNIANLQKKYQISKNDYIFVSQRYPISDDLYYKSIVEILNSISLQIKGKIFIK
                     LHPKEMGNNYVMSLFLNMVEINPRLVVINEPPFLIEPLIYLTNPKGIIGLASSSLIYT
                     PLLSPSTQCLSIGELIINLIQKYSMVENTEMIQEHLEIIKKFNFINILNDLNGVISNP
                     LFKTEETFETLLKSAEFAYKSKNYFQAIFYWQLASKNNITLLGHKALWYYNALYNVKQ
                     IYKMEYSDIFYIDNISVDFHSKDKLTWEKIKHYYYSADNRIGRDR"
BASE COUNT         6400 a         5685 c         5700 g         6426 t
ORIGIN      
        1 tgcataatgt ctcctcgata tgatggaact ttttaacttt acggcaaatt gccgattcta
       61 tcgtatttcc ttttcggttg aaatcccacc ctttagggcg gcaggatcag actttagagc
      121 ggattaacaa aaattaggac ggaacatagg gcgacgcttt ttgtatcgtc ctgtgtgttg
      181 aaacatcagc ataggaaacg caggaaaaga cggctgtttt gcgcctgcgt accgtattag
      241 tcaaaatgcc gtctgaaacc gataacaggg tttcagacgg catttccgtc aattttccct
      301 ttatctgccg aacaggttgg cgatattttc catctgttct tcggtaaaac cgttctcgcc
      361 caatctggcg gcaactgccc attcgcccga caaaccgtgt tccgcaccga gctgccgcca
      421 tttttcgact ttggcttcgt ctgtggtttt ttcgggcagc ggtttgacgg gaatcctgct
      481 ttttgggacg gtattcatcg gtttgcccct aatcgatgga atagccgcga agatactgta
      541 tccgttcgcg cgtcatccgc gtgtcgcact gcaatttgag gtattcggcg tattcctgcc
      601 ggtctgcctg cgcggcggct tgtcggcagt tgctgatttt ttcctgcgcc cacttgcgtt
      661 gttcgccgac caactctttt tgcacgtcgg tatcgagtcc tccccaaagt ttggtaattt
      721 cggattccgc acgctggttt tgtacgcgcg cctcttccac ttctccccgt gatacggtaa
      781 cggtatcggc acgctcgccg tcgtcaggat gcaggatttc cggttcgggc gcgccttctg
      841 cggcttgggg tacgtctgca tcccctccgg cggcattatg ttccaaaatg tcttcgggcg
      901 tgggtttgga cggttcttct tcacgggctt ttccgctcaa aatcctgacc gcgtcttctt
      961 tttttaccgc cttgccgtct atcatcacga tgctcttcac gccgtaaggc agcaacgcga
     1021 cagacagcgt ttgcgccgcc ataccgaccg tgttgtcgac aaatgccgtc tgaccgtctt
     1081 tgacgggcag gaagcggacg gctgccgtca atacgccgtc tttaaactcg acattgccgc
     1141 ccgtcttctg ccgcacaata tccgacaaag cggtttcccc gtacagcagg gggctgtttg
     1201 ccttggcatc ggcaagcgtt tcagacggca cggtaatgtt caaatcggcg atacagaacg
     1261 tgcgcccgcc ttcctgcgtt tccgaagcgt gttccaaaga aaacgccaaa ccgtaggcgg
     1321 cggcgataat tttgtcggca tcgacaaact gcctgccgtc ttcgcgcgcg aaagaacgcg
     1381 cttcctgcgt gagcgtttcc tgaatattgc cgcgtatgcc ttgcaacacg gcggggttgg
     1441 cgcattccaa tgccttgggc ggttcttccc tgccgcaagc ggcaagcagc agggcaaacg
     1501 gcagcgcaat gagtttccga tacatgatgt tccttccaaa cggtgcagac cgatagcggc
     1561 tatcatagca aaagcacctg caggcggtaa accttgcagg tgctttgtcg gaaaggcgga
     1621 aaatcagcct ttaaagaaat tcacaaaacc ggtgagaatc gcggcattaa tcaaatcgac
     1681 gaagaacgcg ccgaccatag gcacaatcaa aaacgcctta tgcgacgcgc cgaaagtatg
     1741 cgtgacggac tgcatatttg ccaccgccgt cggcgttgca cccaagccga aaccgcaatg
     1801 gccggcagcc aatactgccg catcatagtc gcgccccata aagatatagg taacaaaagt
     1861 cgcgtacaaa accatcacca cggtttgtac ggcaaggatg acggttacag gccccgccaa
     1921 accggtcagc tcccacagtt tcaaattcag caacgccatt gccaagaaaa gcgaaagcga
     1981 agcattgccg aacacatcga tggcgcggtc gaacatattg accttgaatg cggcagtgag
     2041 gatgttgcgg atgaccacgc cgccaaacag acaccacacg aatttgggca ggtcgaacag
     2101 atattctttg tcgaagccgt ccataatctc ggcaaacgcc aaacacgcgg caaacatggc
     2161 aagcgtttca acggcagatt ccgccgtaat caggcgggtg cgttttgcct gctcgaacac
     2221 gtcgtccgcg ttgtcgtcct gatcctgttt tttgttttca accggtttgc ggcccatttt
     2281 gttgatcagg cggcgcgcaa ccggcccgcc gatcaggccg ccgaacacca gcccgaaagt
     2341 agccgatgca atacccaaac cggttgcgcc gaccaagccg tattgcgttt caaaattagg
     2401 tccccacgca cctgacgtac catgtccgcc cgtcagcgac accgaaccgg taatcagacc
     2461 gatgagcgga tccaaaccca aagccgtagc cagtccgacc ccgacaaagt tttgcaccaa
     2521 gataaatccg cccacaatcg cggtaaaaac caccagcggc aaaccgcccg ccttcaaacg
     2581 ggaaaaatct gcgctcaagc cgatggacgt gaaaaaaatc agcataaacg cattttgcag
     2641 cggtttctca aatttgaagc tcacgccgta cgcctcgtgc agcgcaaaca ggataatcgc
     2701 ggcaaccaaa ccgccagcga ccggctcggg aatattgaag tctcgtaaga atttgatttt
     2761 ttgaaccaga aatttaccaa ccagcaacac gagcgtggcg gcaatcagtg tgtaataact
     2821 gttgaattcc cattccatgt tgtttcacct cctagaaata tttttccgag catccgtttt
     2881 tgttccggat gtagtgtgtt tcaacgcttg gcgttatccg ccgagtgtca tggtattgat
     2941 gcgcggacaa ggtgttttca gaaagaaatg aaaacaatgg cgtgtccgtg aaaaataact
     3001 ggcaaatatt aggggaatag ttaaagattg tcaaaaaatg cgagtgtaaa tcttttcaga
     3061 cggccttttg tccgatggca tggtgtgctt cgcgtcgcca ttgttctaat agggatatta
     3121 atgattcggc cgaagtgtgg ccgttgctga tggcggcctg cagccagtag caggcggtcg
     3181 gaacatgaca gccgatacct tgtccgtgat agtaaaaaca ggcgaggtgg tattgggcgg
     3241 aagggtggtt ttgttcggca gcaatggcgt accagtgtgc agccgcccga ggatcttgcg
     3301 ccgtaccgag gccgtaatgg tagatgcggc ctaaggctgc cgctgcgttt ttatggtgga
     3361 acccggcagc ttccatgtaa ttttttcgcg cggcattgta gtcggcggga cggccgatgg
     3421 cgcaggcttg tgcttccgcc aaacggtaga tggtttcggt ttgttgttgt tgcagggcgg
     3481 cagttttgat ttgttcgtat tgttgcggat ggtacagcgc ggcgtcgctg atgagttttt
     3541 gtgctgcggc ggcagaaccc agcgcggcgg cacggtggta gtaatcttgc gcgatatggt
     3601 tgtcggcttt gataccgaga ccgtagcggt agaggtcgcc catgattttc agggcttcag
     3661 gatggttttt ctcggcagcg gctttggcat atcgtgccgc ttggaacgga tcgcgttcgg
     3721 aaagttcgcc ggtcagggcg tattgggcca gcttagactg tgcttccgct tgttccttat
     3781 cggcggcacg acgataccat tccaaggctt caggtttgcg ttgggcggca agaaggtcag
     3841 ccagcagcgt ttgtgcggcg atgtggccgg cttgtgcggc tggttcgaga tagtgttcgg
     3901 cttgtgcgtg gttgaggctg acacctgtac cgtagaagta gatttgacca agttgccagc
     3961 aggcggcagt tacgccgagt gctgccgctt tttcgtattg ttcgatggct gtttcaacgt
     4021 cgccttggcg ttgatgatgg cgtgccagat ggtaatacgc aggtgcggca tatcgggcgg
     4081 cagcaagttc cgcccagtag agcgattgtg gatcgttgcg ttgcgcgtgg taacgcatga
     4141 ggattaattg ggcttctgag tgcccctgct cacccagcca ggcatagtcg ttgagaagct
     4201 gtccggtcgg ggtgccgttg tgttcgcgtt gttgcagcag ggagaagagt gctttgggat
     4261 ggcgttgggc cgcggcggct tccaaccatg aaagtgcctg ctccggttgg ccgttttgca
     4321 gcagatggtt gcccaatacg aaagcagctt ccgcataacc ttgctctgcc gcctgttgca
     4381 acaggggcag ggcttgggcg gtattggatt gttccaaaag ggcggcggct tgccggtaga
     4441 ggatatcagg agcggcggtc atggtttgcg ggcggatata aagtggaaga cggatgctgc
     4501 ggcatatggg cggcgatacc ggttgagggc tttgtaaaaa ttttgctcgg cacagtttta
     4561 tagagtgtat tgccttgccg gcttatcttt aggatgtttg gcttgttata ttgttttgcc
     4621 tagggatata tccatatttt gtgtgttaca aagggctcag gttgagtcgg tatgcgctca
     4681 tggcagctcg gtcattatac tgtttttgta atttattgtt aatgataaat gcagattttt
     4741 gtgttttatt tacatggcag tagctaaggt attgattgtt tcaggccgtc tgaaatgttt
     4801 tcagacggcc tgagcttttc tttcgccaag ttaggttgtt ggtgtggaag agtcggatgt
     4861 gtttttgtta ggaaaaaaga cctgactgta gaagttgccg ttaatttggg tcacgttgag
     4921 gtggtacatt cggtaggcat ggaacagctc tttgtcaggc ggtgtcggat gattccaaaa
     4981 ttctgccaag gtattttggt cagtaatgcc gggaatatca taataggcac ggccgagaac
     5041 cttaactggc atattgtgaa tcagtccgga caggccgctg gtgctgttga tggtaaccat
     5101 gccgagaccg tggcgcagga aaacgggcag ggggacatca tggacataaa tcacgcggcc
     5161 tttgagttcg gggtgttctt tgataaagcg tttaatgtcg cgccagtagt cgataaaacc
     5221 gcggtccatc ggatgatgct tgatgatgat gttggtatcg gcaggcgcgt gctcggcaaa
     5281 tgaactcaaa acatggagca ggaagctgcg gacgctggga aagtcgcaat ggatacggac
     5341 ttggctgtcg ttgaatacct gtaagggaac aataaaaaac ttgccgtatt tgcctgcttc
     5401 cacacgtttg gcgatttgga tgtcttcaat atagtagttc aaacgcttga ggatggagag
     5461 cgaccacggt ttgaggtaat ggccggcatt gggtgcgcgg tggtggatgt agtcggggta
     5521 tttgcgtgga ttgcggaaca actcgatata gtaacggata gcgttttttg ccatgggcgt
     5581 aaaaccgccg tgtaccggcg ttggcgcttt atattcttgc tgggcaagct tagggaattg
     5641 ttcaagaaaa aagtcggcac ggcgcggcaa cggggaaaat gcgttgacgc cgtctttttc
     5701 taaggtgatg tagtaggggc ggaaatagcc ttcttcaaac gcccagaaac tggcttggtt
     5761 ttcgtttgca atgcgttttg caatgacgtg ataagggcgt gtgtcgccaa agcagacaac
     5821 ggcctggatg tgatgttgag tgatgtattc ttgcaaaaac tcaggaaagg catcgtagtt
     5881 gtcgttaaaa acaacggtat gcgcttgagt gggcggataa aaatagtcgt cgcctgcatt
     5941 aaagttgaat ttatgtacgg ttttgccgtt tgcagtcagc cagtcggcaa ggcgcagaaa
     6001 aaaatcgccg acagggcctt gaagcagcag gatattttct gcgctttcaa gcaggttttg
     6061 caggttattt ttgaggacgg tctgtttcat gttgcaatgt ggttttgttt tttatgtaat
     6121 agttttaggt tgaactttca agcatacgcc aagagaatta acgatgcaaa ggcaatgatg
     6181 ccgcaataga ggcaagttta tgacgcatcg ttaactttga tggtatttat ttgaaagatc
     6241 gatatagttg tttgatttta cctaattttt tggcaaagta cccgcgatgt aatccgttgt
     6301 tgtttttttg catatttttt tgtcgtatca ggatttgggc tgcggtttct gcatttatgg
     6361 cctgatgggt ttcggggtgg atgtagtcgg gatagtggat gagcgtgccg gcaatcagct
     6421 gccaaagctc aagtctgcgg ctacggcgcg gaatggggag cagatcttgg gtaagtcccc
     6481 agcctgcgta aaaaggcagg ccgtagcagc tgactttttt gccgcgcaac aaggcttcaa
     6541 aaccggtcag cgaagtcatg gtatgtactt cgtctgcgta ttggagacag gtcaggatgt
     6601 cggtttgctc ggcggtttgg tcggcatatc gtgcagcatc ttcaggggaa atatggccga
     6661 tgcggttacc gctgactaca tcgggatgcg gtttgtagat gatataggca ttggggtttc
     6721 gttcgcgtac ggtacggagc aaatccagat tgcggtagat ttggggcgaa ccgtagcgga
     6781 tagacgcatc atcttcaacc tggccgggaa cgaggatcac ggttttgtcg gttgacgggg
     6841 cggtgaagtc tgagctgccg acgttgtatt tactgatgtg gttttcggtc agcatttttt
     6901 gcagcttcaa ggccgtctga aagtcttgat cgtcgaagtt ttggttttgt aggatgtatt
     6961 caagacggga cggggtttcg gcattgaaat aaatgctcat atcgtcggta acgagcgaca
     7021 gcggcggcac taagttggag ccgagtccga ccgagcggat aaagccgtct tccatgcgca
     7081 gcagggggat gtggtgttgt tcggcaaagc ggacgatggc ctctttgccg ttgccccagg
     7141 caaggatgcg tgcatcgtcg gacagtttga cccctgccag tttttgggtg gaagagataa
     7201 atttcagacg gcaagagggt acgttaaaga acggtttggc aaccgcgcgt ttccacaaag
     7261 acataccaac gcaatacaac tcgccacgca atttgtcgtt tttgcgtttg accgtcgcca
     7321 gatagtcgat gacatcaaag aggctgcctg cttcgccggt attggggttg aggtagcggc
     7381 tgtattgcag ataggctgca gcgaagagct gcagcaagtt gcggggggcg cggcgttggg
     7441 tttgaacaag gctgtcgatt ttaggatggc ggtcgtcact cacgccccat ccggcatacc
     7501 acggcaaacc aaacgttacc aaaggcttgc cgcacaacaa ggcttcaaaa cccatttgcg
     7561 aggtcacgca atacactttg tccaccgctt gcagcagcga aatcggatta atgtcttcag
     7621 ccaataaacg cacacgcggc tgctgtgcca aatcagtaag gtaaccctgt ttcttgccgc
     7681 tcaatacatc gggatgggtt ttgacccaga tttccgcatc aggattttcg gctaaggccg
     7741 tctgaaacat ttggcggaat gtggcttcat ctgcgccgcc atattgaatc gccatatcgc
     7801 cgaaagtttg atcaattacc aaaacaatgt ttttgctgtc ttgtacgagg ccgtctgaaa
     7861 aatccagagc atggttatat ttagacaaac ggtgcgtcaa aatcaaatca atggcctgct
     7921 gcgcttggtt aagcatttca gacggcatgt ttgcggctaa aatcaactgc tccaaacgcg
     7981 atgggcgggt tgtgtcgtaa tagatgccga tatcgtcgta aaccagtgcg aagggcggat
     8041 aaccggccac gcctaagccc agtgagcgta aaaaaccgtc ttccaaggct acaaacggca
     8101 agccatgtga ttgtgcaaaa gcacgtgctt ggtgggtggt cgggcgtaag ccccagccaa
     8161 tgatggtttg ggcgttgaat acggttttgt taagtgaata ttccggtaga aattgcgtaa
     8221 tattcggaat tttacgtata ccgaaagagc gaagaggaat gtaggcagga atcacaataa
     8281 ataggaaaaa atattactga caatataata tcttattaac agattttgtg taaattttct
     8341 gactatttaa atatagtaga aatttagtta gtaggctagc tggtaaaaat taggtcatct
     8401 tgctacaaat tacccacgat gacctaaaag tgaaaattaa aatgtggccg cttcagcaag
     8461 catcttgcct gccaaatcct tggccgatag gcttggttct cccaataaag gccagtcgat
     8521 tcccactgtg gcatcattcc aaattaggga atgttccgca ttcgggttgt aatagtcggt
     8581 gcatttgtag acgaattccg cttcatcgct caacacataa aatccatggg caaacccttc
     8641 cggcacccat aattggcgtt tgttgtctgc cgataaaacc tcaccgaccc agtggccgaa
     8701 agtaggacta tcacgacgca tatccacggc aacatcaaag acttcgcctg ataccacgcg
     8761 caccagtttg ccttgtgtat tttcggtttg ataatgtaaa ccgcgtaata cgccttgggt
     8821 ggatttgctg tggttttcct gcacgaaagt gcgctcggct acattttggc ggaaccattc
     8881 atcacggaag gtttccataa aaaaaccacg ctcgtcaccg aagactttgg gttcgagcaa
     8941 tttgacatcg ggaatgcggg tatcgatgat attcatcatg ttttcctaaa aagcgtttca
     9001 gacggcctga aaactggtaa aagcaacctc ttaatctttg ccaaccaagc gcaataaata
     9061 gcggccatat tcatttttac acattggctt tgccaagttt ctgatttctt cgctgctcaa
     9121 ccagccatta cgccatgcga tttcttccaa acaggcgact tgtaggtttt gaatgttttc
     9181 aatggtttcg acaaacgagg ctgcttccaa caggctggcg tgtgtgccgg tatcaagcca
     9241 tgcgaaaccg cgaccgagca attggacatt gagcgaacca tcgtccaaat acatttgatt
     9301 caaggtggta atttccaatt cgccgcgttc agacggcttc acttgtttgg caaactcgac
     9361 tacgcgatta tcgtagaaat agaggccggt taccgcccaa tcggatttag gttgtttcgg
     9421 tttttcttcg attgacaggg ctttgaaatt ctcatcaaac tcaatcacac cgaaacgctc
     9481 gggatctttc acttgatagc cgaatacggt agcacctttg gtttccacgg aagcggcggc
     9541 ttctttcagg gattggctga aatgctggcc atagaaaata ttgtcgccca acaccaaaca
     9601 caccgaatca tcgccgataa attcttcacc aattaaaaag gcttgcgcca aaccatcggg
     9661 gctgggttgg atggcgtagg aaatttgaat accgaaatcg ctgccatcac ccagtaagcg
     9721 gcggaaagca tcgttgtctt cgggggtggt aatcaccagc acatcgcgga ttccggccaa
     9781 catcaacacc gacaaggggt aataaatcat cggtttgttg tacaccggta gtaattgctt
     9841 tgatacgccg cgggtaatcg ggtaaaggcg gataccgctg ccgcctgcga gaataatgcc
     9901 tttcatcagt ttactttcct tatgtagttt ttcaggcggc cttcatgccg tctgaacgta
     9961 tttttattat ttgaggcctt tgcaaagcca cagatttgag tacagttcga agttatagca
    10021 gcgcagaaag cgcagacata tcacaaagat aggcaagctt tcgagcagcg cataacgaag
    10081 aaatgtgcca aagatgggga gtttgcaaag gtctctattt aactgcctaa gcgttcacga
    10141 ttgtagctgc cgtctaacac gcgcgaccac caagtttgat tgtttaaata ccattccact
    10201 gttttgcgga tgccgctttc aaaagtttct tgcggctgcc aacccaactc acggccgatt
    10261 tttgcggcat caatcgcata gcgcacatca tggccggggc ggtctttgac ataggtaatc
    10321 aaatcttcat aacgcgccac gccttgcggt ttgttcggca ccaattcttc cagcagggcg
    10381 caaatggtgc gcaccacttc aatattggct ttttcattgt ggccaccaat gttgtaagtt
    10441 tcgccgattt cgccttctgt gaccacttga tacagcgcac gcgcatgatc ttcaacaaac
    10501 agccagtcgc ggatttgcat accgtcgcca tacaccggca gtggtttgcc atcaagcgca
    10561 ttcagaatca tcagtggaat cagtttttca ggaaaatgat aagggccgta gttattagaa
    10621 caattggtca caatggtcgg caggccgtaa gtacgcagcc atgcgcgcac caaatggtcg
    10681 ctggaggctt tggaagccga ataaggactg gaaggggcgt aaggcgtggt ttcggtaaac
    10741 aaatcatccg tgccgtgcaa atcgccatag acttcatcgg tggaaatatg gtggaaacgg
    10801 aaggcttcgc gctgttcaga cggcatttgc cgccggtagg cgcgcgcagc ttcaagtaga
    10861 ttgaacgtgc cgatgatatt ggtttggata aattctcctg cagaatcgat ggagcggtcg
    10921 acatgacttt ccgccgccaa gtgcatcacg gcatcaggcc ggtgttgtgc gaatacgcgg
    10981 tcgagttcgg cgcggtcgca aatatccact tgttcaaaag catagcgggg attatcggct
    11041 acctcggtca aagatttcaa attgccggca taagtcagct tatcgacatt gacgacagcg
    11101 tcccgggggt ttcggataat atggcggaca acggcagaac cgataaagcc cgcgccgccg
    11161 gtaacgagga tggttttttt gtttgcggtt tgcatttaat ccccatatcc gttggggttg
    11221 cggctgaccc aacgccacga atcctccatc atttgtttca aaccgcgttt ggtttcccag
    11281 ccggtttgtt gtttggtatg ggacgggtcg gcaaaggaac acgccaagtc gccggcgcga
    11341 cggggttgga tttgataggg aatatttaag ccggatgcgg cttcaaaggc acggatgatt
    11401 tccaaaacgg aataggcgcg ccccgaaccc aagttgaaca aatgtacgcc ggcaacaccg
    11461 cctttcgcct tcattgccgc gatatgccct tctgccaaat ccatcacatg aatatagtcg
    11521 cgcataccgg tgccgtcggg ggtcggataa tcgccgccga ataccgacag ttgcggcagc
    11581 ctgcccgaag ccacttggca gatatagggc aaaaggttgt tgggaatgcc gttgggctgt
    11641 tcgccgatca agccgctttc atgcgcgccg atcgggttga aataacgcaa caaaatcacg
    11701 ctccaacgcg gatcggcttt ttggatgtcg gttaacatcc gttccaccat cgctttggac
    11761 gcgccataag gattagcggt atcgcccggg cgcatatctt ccgtataggg cattttacgt
    11821 atcatggcgc gacgcattaa agtaaacgcc aaagcgcgtt tatactggtt atccagtttc
    11881 cctatatttt tacggtacaa atcaagttgt tggcattcat cgtgaaaata gaatttttcg
    11941 gcataacgct gactcataaa accggcatgc gggctgcctg aaaaaatcat tgcgacatca
    12001 tcgtcattta atgtttcatg gttgttttct attaatgcta aagcaatttg gtaattaatt
    12061 gccaaaatat cgttagtaat cacacgatag ccgcgttttt tggcttcata ggcaaaggaa
    12121 cagcctccac taaatacatc tgcaactgta tctacatcag acggaggctg gtcacaaatc
    12181 caggaagcta ttttctcttt attaccgata tagttaattt tcggatattt cttattcatt
    12241 ttcactcatt tttaaaatac tttcagcaat agcttttgcc aataaaggcg gtacggcgtt
    12301 accaacctgc tgctgctggg caattttgct gccacaaaaa taaaattatc agggacagat
    12361 tgtaaggcag ctaattcacg aacggttaaa gcccgattct gttcatagtg aaaaactttg
    12421 cgcatatctc ctgtaataca aacggctggt ttgttgctgt tgtaacggat gtatttacgg
    12481 atatcacctg ttttcggacg taatggttca ggaatatcgt tacggttacc tccattttta
    12541 acaaatgcca ttttttctaa catttgtgcc gaatgattca tagcttcatg atttgcaacg
    12601 tgtggattgc tttcgccagc agccagtttt ggaaaatgtc ctattgctga tccaacagtc
    12661 tgatgggaaa tctgcaaagg ttcgggaaag gaaattttgc ctttatccct cctcccgata
    12721 aatatcactc ggctacgtat ctgaggaaca ccgaaatcgg ctgcactcag tatcttacat
    12781 tccaccgaat aaccgatatt ctgaaatgct tgaataatct caatacgtgt tttacctgaa
    12841 ttgtgtgtat agagtcgcgc tacattttcc ataacaaaaa aatatggttg gacaatttta
    12901 actattcgga caaactcttt aaataaatgg ttgcgtgggt catctgtaaa tgtccgtcca
    12961 atctttcctg ccatactaaa accttgacaa ggtggtcctc caataatcaa atcaactgct
    13021 tgtccgttaa gacaattgat taaatcttgt tcggttagtg tggttaaatc tttttgcagt
    13081 aattgatgat gggggaagtt ggtacggtaa gtctgacaat aatcagactc catttcaaca
    13141 gaaagcaatt gttggaatcc ggcttgttca aaacccaagg ataggcctcc tgctcctgag
    13201 aaaaggtcaa tataggtaag tggtgtgtgc ataagtcaaa atccataaac tcttcgatta
    13261 ttttaccgct tcagcttcgc aaacgcatcc gccatcgccg aattggctgg ggcgcggtcg
    13321 ttgcgttggg gtttgcggcc ggctgtccgt tcgcggctgc ggttttcaga cggcatttta
    13381 tgttttgcgc cgcccggttc gtcatccaag cgcatggtca gcgcgatgcg tttgcgtgca
    13441 gcatcgactt ccagcacttt cactttcacc acgtcgccag ctttcaccac ttcgcgcggg
    13501 tcttggacga acttgttgga cagggcggag atgtgcacca agccgtcctg atggacgccg
    13561 atgtccacga acgcgccgaa gttggcgacg ttggaaacca cgccttcgag tatcataccg
    13621 acttgcaagt cgctgatttc gtggatacct tcggcaaacg atgccgtctg aaactcgccg
    13681 cgcggatcac ggccgggttt ttccagttcg gacaggatgt ccaaaatggt cggcaggccg
    13741 aagcgttcgt cggtgaagtc ggacgctttg atttgcttca cgcgctcgcg gttgccgatg
    13801 agttcggcgg cgttaatgcc ttgttgcgcc agcattttgg cgacgacggg ataggcttcg
    13861 gggtggacgg cgctcgcgtc caacggctct ttaccgccgt taatccgcaa aaagcctgcc
    13921 gcctgctcga aggttttttc gcccaaacgc ggtactttca gcaatttttt gcggctgtcg
    13981 aacgcgccgt tttcatcgcg gtaggcaacg atgttttggg caagggtttg attcaaaccg
    14041 gaaattcgcg ccaagagcgg ggcggaggcg gtgttcacgt ccacgccgac ggcgttcacg
    14101 cagtcttcga ccaccgcgtc cagcgatttg gcgagccggc tttggttcac gtcgtgctga
    14161 tactgcccca cgccgatgga tttggggtcg attttgacca actcggcaag cgggtcttgt
    14221 agcctgcggg cgatggacac cgcgccgcgc agggaaacgt ccaagtcggg gaactcgcgc
    14281 gccgccagtt cggacgcgga ataaatcgac gcgccggctt cggacacgac gattttatgc
    14341 agccccattt tcgacatttc acgcaccagt tcgcccgcga ttttgtcggt ttcacggctg
    14401 gcggtgccgt taccgatggc gatgagcttc acgccgtgct gtttaatcag gcgcgacagc
    14461 gttgccaaca tattgttttc ttgatgcaaa tagacgatga cggtatccag cagcttgccg
    14521 gtgtcgtcca ccacggcgca tttcacgccg ttgcggtagc cggggtcgag acccagcgtg
    14581 gtcagccgtc cggcgggcgc agcaagcagc aagtctttga gattgcgggc gaacacggta
    14641 atcgcgtcgg tgtcggcggc ttctttcaaa cgattgagag cttcaagttc caacgacaaa
    14701 aagattttcg cgcgccaagt caggcgcacg gtgtcgcgca gccatttgtg gccgtctgaa
    14761 actttgaagc ggcgggcgat gatttgctcg tattcgcttt gctgcgtaat cggcgtgtcg
    14821 tcgggctgat atttgagcgc gatgttcaac acgccttcgt tgcgtccgcg caaaaccgct
    14881 agcgcacgat ggctgggcat cgcacgaata ggttcgcggt ggtcaaaata atcgctgaat
    14941 ttttcgcctt cggtttcttt gcctccaaca acttgcgcgt ggatttcggc ttcgttccac
    15001 agcttgtcgc gcagcgtgcc gatgagttcc gcgtcttcgg caaactgctc catcagaatc
    15061 gcacgcgcgc cgtccaacgc ggctttggca tcggggacgt tttcgttcag gtagccttgt
    15121 gcggcggctt ccacgtcctg cgactgctcg gcaagcaaca cgtccgccag cggctgcaaa
    15181 ccgtgttcgc gcgcgatttg cgctttggtg cggcgtttgg gtttgtaggg cagatacagg
    15241 tcttccagcg cggttttgtt atcggcggct tcgatttgcg ccctgaggtc gtctgaaagc
    15301 ttgccttgct cttcaatgct ttttaaaaca acggctttgc gctcttccaa ctcgcgcaga
    15361 tattgcagcc gctcggcaag ccggcgcaac tgcgtatcgt ccaacccgcc cgtcgcttcc
    15421 ttgcggtagc gggcgataaa cggcacggtc gcgccgtcgt ccaaaagctc gacggcggcg
    15481 gtgatttgcg cggcagtcgc ggagagttct tgggaaagaa tttgagtaat gttcatcaat
    15541 agaattccaa cggacaggcc gtctgaaatt tcagacggcc tgatttaaaa acaatcgctt
    15601 taaggcagcg aattataata ttcgtaggct ttgtccatat cttcaaactg gtacatatgc
    15661 cctttttcca gcaccatcgc attatcgcaa tattgcttca tggcgctgtg gctgtgcgac
    15721 accaagatga tggaacggtc tttgcgcttt tcaaacaact cgtacttaca tttatcggca
    15781 aaacgcgagt caccaactgc aatcacttcg tcaatcaaat agcaatcaaa ctctaccgcc
    15841 aacgacaaag caaatgccaa acgcgccttc atacctgaag aataacgctt gaccggctcg
    15901 taaagatatt gccccaactc ggaaaactct tcggtaaagt tcttcacata atcgatatcg
    15961 acattgtaaa tccggcagat gaaacgcaaa ttgtccatac cggtcagact gccttgaaac
    16021 gcaccggaga atgccaaagg ccaagaaata ctcattgtcc gcttgatttc acccgtggtc
    16081 ggcggctcaa cgccactgat caaacggatg agcgtcgatt tacctgcacc gttgcggccg
    16141 agaataccga ttttctcgcc cttctccatt ttgaagctaa tatcgtgcaa gactgtccgc
    16201 caaccttggc gggtcagata gcgtttggaa acgtgttcaa ctgaaatcat tgcggctcga
    16261 ctcctttact gaatttactg accatcgcca agccaaacaa caacaacacc agattgcaca
    16321 atacgatata ccaaggattt tcataggtaa ttacatcgct gccaaaatat ccggcacgga
    16381 acatttctgt gccatgcacc atcgggatca tcaatgcata ctcttgcact ttcggaggca
    16441 aattatgtac aaaaaagaat gcacccgata acggcatcat cacaaaagtc aatgtgcccc
    16501 aaatcttgcc aaacggctcg aaattaaagg caatcgaaca aatcaccaaa cccaaaccaa
    16561 tcgcaaaaaa agccatcaaa agccaagcca tcagcatata aaacatatct gccggcattt
    16621 caatccagcc aatcgcaatc aataccgcca taatcacaat ctgcgcaatg gttgcaccag
    16681 caatttccaa aatcatgcgc gccaagatgg tatccaaaac tcttacattg cggtgataaa
    16741 gcaagctggc atttgaagaa atcgacccaa ctgcccgttt tgaggcatta cgccacatca
    16801 tcaacatcgg atagccagta atcgcaaatg cgacaatatt caaagttgaa tatcggtctg
    16861 cctttaaaaa tttccacatc aagacgataa cgaatgtcat cagcaacggc tcaacaaaca
    16921 gccataaaaa gccaatatta ttgcgaccgt aacgggtgat aatttcccgc atcaaaagcg
    16981 caccgattac gcgcctttga atggctaaag attcccaaaa tgatgtttta tgcaaggctt
    17041 tcatcagttt ttatgctcac gaatgctggc agtcaacagg ctcaaaatac cataaaccat
    17101 caagccgata atcagagtgg caacaatgtt gtataaccgt ttaggctcat gtgccaaatc
    17161 cggcaggctc ggttgcgaga tcacttccaa ataaagctgc tgacggtctg cttcaacctt
    17221 ggcactttcc aaagaagtca tggcggctgc caactgctgc tctgccaact ggttttccaa
    17281 atacacacgc tgatattcgg cagcctgatt agacaacgaa gaatgcccac cgcccgaaat
    17341 ggcacgtaac tgttggtcaa tttctttacg caagctctgc tcacgcgcct gcaaacccgg
    17401 aatctgcgga ttctccggag tgactgcttt cacctgatcc agctgggttt gaatcacaat
    17461 caattcatct tgcagcttgg aaaccaaccc catttgcact tccgattgcg ctttcaaatc
    17521 aaaaacgcca ttggcaatcc ggtaatccgt cagattctga gaggcttcct ttacccgctc
    17581 tgccgccgtt ttcactactt cttccgcata gcgcaccgta tcagcacgtg cacgatcgtt
    17641 caactggtta atcaatgctt caccttgttt taacaaagcc tcattgattt tcttagattc
    17701 cagcgcatca aaggaagtta cattcaacgt ggaaataccc gaaaccgtat caaaattgat
    17761 catcacctga tttttatagt attgataaaa agcctcttcc tcgccacgga atccaaaacc
    17821 attaaatcgg ctaaatacat cgcccttagt ttcataaaat tcacgcaccg gcaagatttt
    17881 acgcagttca tccaaagacg agcgcgaacg catatactcc ccaaccgtgt aaatatcatc
    17941 ttgcgcacgg gcaaaacctg tgccctgcaa aatggcaccc aggccattga gagaagattg
    18001 gcttttaggc gagcgcacca caaagctcga ttgcgacgta aaacgatcgg aagcgaagaa
    18061 gccgaaatac accaacgaaa ttaccgtagg gataatcacc gttacccaaa ataaagggct
    18121 tagcttttta atccaacttt tctttttcgg ctttttacgc tcggctttgg tttcagtggc
    18181 aactgccaca ggaagttgct cagacatctt aattactcac attaattagt taaattatta
    18241 atactgttca cgccactggt aaccggcgag aacacaaacg acaagaattt ctgcacttca
    18301 gccaacggcg cattcgacac atacaataca tctttattct tcacaggaaa gcgctgcata
    18361 gaaaatagcg aatgcgcatc agccatattc acacgatata ccgttggaat ctctgcctca
    18421 ctgccataac cttgagcaat ccatttatcc tgacgttctg ccggcaattc caccaatggc
    18481 gtatagcgga acacaaacac accacgcgca tcagaacggc gatcttgcaa accgcccata
    18541 cggccaatgg cttcagaaag cgataagcct ctggctgaaa aaccgatttc ttgtgttctc
    18601 cccaccgcac ccatagacgt aaaggtatag ggattggtaa tcatggtaac cacatcaccg
    18661 cgacgcagca aaatattttg tcgcggattt gcaactaaat cttccaaggc aacagttcgt
    18721 actacattgc cacgtgtcag ctgcacattc gtatcctgca catttgccgt tgaaccacct
    18781 accgcagcca ccgcatccaa cacacgctca ccggctgccg tcagcggcat acgcacacta
    18841 ttcccagcac gaatcaccga cacattcgcc gcattattct gcaccaaacg caccatcact
    18901 tgtggctgat tggccatttt tttcaggcgg cctttaataa tttcctgaac ctgaccaggc
    18961 gttttaccga ccaccgaaat atcgccaaca aacggcacag aaaccgtacc acgtgccgtg
    19021 accaactgct ctggcaactt agtttgatgc gcactacccg agcccatcga agaaaggcca
    19081 ccaccaaaca atactgccgg cggcgcttcc caaatcataa tatccaatac atcaccaata
    19141 tttagcgtac cagccgaagc ataaccatcg ccaaactgag tgaatgactg atttatctga
    19201 gccttatata ataactgagc aaccgtatga ttcacatcaa tcagctccac ttcaggaatt
    19261 tgaacttcag attgttgccc taaagagaca attttttttg cgctggggcc tgatgaagga
    19321 atcgcagagc atcctacaat taaacttcca cacaataata atactgcgtg acgaatataa
    19381 aatttcactt taaacacaag ccaaatccta atataattat aaatggccta attatagcac
    19441 ttaatcgaaa taaatttatg agtacgtaga gtataattag tattcttctt tccaacttcc
    19501 ttatacttat atacttatag attctaaaat catgaaaaga attctttgca ttacaggtac
    19561 cagagccgac ttcggcaagc taaaaccttt attagcctat attgaaaatc acccagacct
    19621 tgaattgcat ttgattgtaa ctggtatgca tatgatgaaa acatatggca gaacctgcaa
    19681 ggaagtaact cgagaaaact atcaacatac atatctgttt tcaaatcaaa tccaaggtga
    19741 accaatgggt gccgttttag gcaataccat tacgtttatc tctcgtctat ctgatgaaat
    19801 tgaacctgat atggtcatga ttcacggcga ccgtttagaa gcactagcag gcgcaactgt
    19861 aggtgcatta agcagccgtt tagtttgcca tatcgaaggt ggtgaactat ctggtacagt
    19921 agatgactcc attcgtcatt ctattagtaa actttctcat atccacttgg tagcaaatga
    19981 acaagctgtc actcgcctag tgcaaatggg agaaaaaaga aagcatattc acatcatcgg
    20041 ctcccccgat ttagatgtta tggcctcttc caccctccca tccttagaag aagtcaaaga
    20101 atattacggt ttaccatacg aaaattatgg tatttctatg tttcaccccg tgactacaga
    20161 agcacattta atgccacaat atgcggccca atatttcaaa gcattagaat taagtggcca
    20221 aaatatcatt agcatttacc ctaacaacga cacgggtact gaaagtattt tacaagagtt
    20281 attaaaatgt caatctgaaa aatttatcgc atttccatct atacgatttg aatacttttt
    20341 agtcttattg aaacatgcta aatttatggt cggcaactca agtgcaggta ttagagaagc
    20401 tcctctctac ggtgtccctt caattgatgt tggtacacgc caaagtaacc gccatatggg
    20461 aaaatctatt attcatacag attatgaaac taaaaatatc tttgatgcga ttcaacaagc
    20521 atgcagttta ggcaaatttg aagcagatga tacctttaat ggcggagata ctcgcaccag
    20581 cacagaaaga tttgctgaag taatcaacaa tcctgaaacg tggaatgttt ctgctcaaaa
    20641 acgttttatc gatttgaatc tttaaattat ggaaaaacaa aatattgcgg ttatacttgc
    20701 gcgccaaaac tccaaaggat tgccattaaa aaatctccgg aaaatgaatg gcatatcatt
    20761 acttggtcat acaattaatg ctgctatatc atcaaagtgt tttgaccgca taattgtttc
    20821 gactgatggc gggttaattg cagaagaagc taaaaatttc ggtgtcgaag tcgtcctacg
    20881 ccctgcagag ctggcctccg atacagccag ctctatttca ggtgtaatac atgctttaga
    20941 aacaattggc agtaattccg gcacagtaac cctattacaa ccaaccagtc cattacgcac
    21001 aggggctcat attcgtgaag ctttttctct atttgatgag aaaataaaag gatccgttgt
    21061 ctctgcatgc ccaatggagc atcatccact aaaaaccctg cttcaaatca ataatggcga
    21121 atatgccccc atgcgccatc taagcgattt ggagcagcct cgccaacaat tacctcaagc
    21181 atttaggcct aatggtgcaa tttacattaa tgatactgct tcactaattg caaataattg
    21241 tttttttatc gccccaacca aactttatat tatgtctcat caagactcta tcgatattga
    21301 tactgagctt gatttacaac aggcagaaaa cattcttaat cacaaggaaa gctaaatgca
    21361 aaacaacaac gaatttaaaa ttggtaatcg ttcagtaggt tacaaccacg aaccattgat
    21421 tatctgtgaa atcggcatca atcatgaagg ctctttaaaa acagcttttg aaatggttga
    21481 tgctgcctat aatgcaggcg ctgaagttgt taaacatcaa acacacatcg ttgaagacga
    21541 aatgtctgat gaggccaaac aagtcattcc aggcaatgca gatgtctcta tttatgaaat
    21601 tatggaacgt tgcgccctga atgaagaaga tgagattaaa ttaaaagaat acgtagagag
    21661 taagggtatg atttttatca gtactccttt ctctcgtgca gctgctttac gattacaacg
    21721 tatggatatt ccagcatata aaatcggctc tggcgaatgt aataactacc cattaattaa
    21781 actggtggcc tcttttggta agcctattat tctctctacc ggcatgaatt ctattgaaag
    21841 catcaaaaag tcggtagaaa ttattcgaga agcaggggta ccttatgctt tgcttcactg
    21901 taccaacatc tacccaaccc cttacgaaga tgttcgattg ggtggtatga acgatttatc
    21961 tgaagccttt ccagacgcaa tcattggcct gtctgaccat accttagata actatgcttg
    22021 cttaggagca gtagctttag gcggttcgat tttagagcgt cactttactg accgcatgga
    22081 tcgcccaggt ccggatattg tatgctctat gaatccggat acttttaaag agctcaagca
    22141 aggcgctcat gctttaaaat tggcacgcgg cggcaaaaaa gacacgatta tcgcgggaga
    22201 aaagccaact aaagatttcg cctttgcatc tgtcgtagca gataaagaca ttaaaaaagg
    22261 agaactgttg tccggagata acctatgggt taaacgccca ggcaatggag acttcagcgt
    22321 caacgaatat gaaacattat ttggtaaggt cgctgcttgc aatattcgca aaggtgctca
    22381 aatcaaaaaa actgatattg aataatgctt attaacttag ttactttatt aacagaggat
    22441 tggctattac atatagctaa ttctcattaa tttttaagag atacaataat gctaaagaaa
    22501 ataaaaaaag ctctttttca gcctaaaaag ttttttcaag attcaatgtg gttgacaaca
    22561 tctccatttt atcttacccc cccacgtaac aatttatttg tcatatctaa tttaggtcag
    22621 cttaaccaag tccaaagcct aattaaaata caaaaattaa ccaataattt actagtaatt
    22681 ttatatactt ctaaaaactt aaaaatgcct aagttagttc atcaatcagc taacaagaat
    22741 ctatttgaat ctatttatct atttgagctt cctagaagcc ctaataatat aactcctaaa
    22801 aaattacttt atatttatag aagttacaaa aaaatcctta atattataca gcctgctcat
    22861 ctctatatgc tgtcttttac aggccactac tcctatctga ttagtattgc aaaaaaaaag
    22921 aatattacga ctcatttaat tgatgaaggg actggaacat atgctccttt attagaatca
    22981 ttttcatatc atccaacaaa attagaacgt tatttgattg gaaataatct taatattaaa
    23041 ggatatatag atcattttga catattgcat gtcccctttc ctgaatatgc taaaaaaata
    23101 tttaatgcaa aaaaatataa ccggtttttt gcgcatgctg gaggaataag cattaataat
    23161 aacattgcaa acttacagaa aaaatatcaa atatctaaaa atgactatat ttttgttagt
    23221 caacgctacc ccatttcaga tgatttgtat tataagagta tagtagaaat cttaaacagc
    23281 ataagtttac aaattaaagg aaagatattt attaaactac acccaaaaga gatgggcaac
    23341 aactatgtaa tgtctttatt tctaaatatg gtagaaataa accctcggct ggtagttatt
    23401 aatgaacctc cttttctaat tgagccccta atatacttaa caaatcctaa aggaattata
    23461 ggcctggcct ctagttcttt aatttataca ccattactct caccctcaac ccaatgtctt
    23521 tctattggag agttaattat taacttaatt caaaaatatt caatggtgga aaacactgaa
    23581 atgatccaag aacacttaga gattattaag aaatttaatt ttattaatat actaaatgat
    23641 ttaaatgggg taataagtaa ccctctcttt aaaacagaag aaacatttga aacacttctt
    23701 aaatctgcag aattcgcata taaatctaaa aactactttc aggctatttt ttactggcaa
    23761 cttgccagca aaaacaatat taccttatta gggcataaag cattatggta ctacaatgca
    23821 ctttataatg taaaacaaat ttataagatg gaatattcag atatttttta tatcgataat
    23881 atctccgtag actttcatag taaagataaa ttgacatggg aaaaaattaa acattattac
    23941 tattccgccg acaatagaat tggtagagat agataaaaat actatgactt ctgatctcca
    24001 tacgtatgct tgttttcaaa aagcagcatt aagatagata agtgaagctt gatgagagcc
    24061 atttttgtgg tcatcgccaa ggtacacgcg gagagtaatc gacaacagag ctgctgtatt
    24121 ctggctttta aagcccagta gtaaagttta taaggctgag acctttgcaa aatcccccaa
    24181 aatcccctaa attcccacca agacatttag g
//
LOCUS       DAWITQ010000012        24158 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.012, whole genome shotgun sequence.
ACCESSION   DAWITQ010000012 DAWITQ010000000
VERSION     DAWITQ010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 24158)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24158)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24158
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.012"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..255
                     /locus_tag="WIX18_000438"
     CDS             <1..255
                     /locus_tag="WIX18_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ5237594.1"
                     /translation="IKRHSQYLIGGKLRLWQKRFWEHTIRDEADFACHFDYLHFNPVK
                     HGYVGQISDWRFSTFHRYVKQGIYPHNWGGGNADFSIEYD"
     gene            327..488
                     /locus_tag="WIX18_000439"
     CDS             327..488
                     /locus_tag="WIX18_000439"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237595.1"
                     /translation="MRWLNLKNSTSVHNTQGIRTKEAVEQGLRGNNRPEKGIGNRWNY
                     DGFIKELAK"
     gene            538..822
                     /locus_tag="WIX18_000440"
     CDS             538..822
                     /locus_tag="WIX18_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237596.1"
                     /translation="MKVITITLFTSCILSGCYGLEYGMSGGIPHDDWARGSHVSQAKA
                     DAAWKECSDKYMRNGGSGLVEQCMNDKGLIRLSEIRRRQKRAETQRAVIK"
     gene            complement(947..1663)
                     /gene="trmB"
                     /locus_tag="WIX18_000441"
     CDS             complement(947..1663)
                     /gene="trmB"
                     /locus_tag="WIX18_000441"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HEZ5237597.1"
                     /translation="MTDTAENQTQNNWQAEHPRSIRSFVLRQSHMTSAQQRAIDTLWG
                     SFGIDYQATPADLDARFGSSRPKILEIGFGMGTATAEIARRLPETDFLAIDVHGPGVG
                     NLLKLIEENHLENIRVMRHDAVEVVENMLQDGSLDGIHIFFPDPWHKKRHHKRRLIQA
                     PFIAKLLPKLKTGGYIHLATDWEEYAQQMLEVLSSFDSLQNTAADYAPTPDYRPETKF
                     EARGKRLGHGVWDLVFKRIG"
     gene            complement(1785..3188)
                     /locus_tag="WIX18_000442"
     CDS             complement(1785..3188)
                     /locus_tag="WIX18_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HEZ5237598.1"
                     /translation="MNNPDLLYHQALERLSQEQYDFTEVRRLLTEAASAGHPAAAFEL
                     AKHLMDADSPHQDREQGMEMLRIAAEQGHPYARYNLAYIQELEGARPETLIPLYRPLA
                     EEGLPEAQVRLMYLLYASRHFEEALKWAKTTAKNNNPHGQYLLAQYCQYGTPPDFETA
                     HLLYREAAAQGLAAAQWQLGLQYRFGQGTPTDTTQAINHLRAAAQQGYIPAYTPLAEL
                     ILPTAPDEAVYRFQQAAQENDPDAHAALADIYLQGKHLERNHKLALHHAEAAAAERHP
                     EGLRILGDICRYSLGIAPDTEKARHYYRQAAEAGSLSAYQKLISDSALNHPNQYGGIK
                     DSAIRRQRAERLYQKAQALHYGLQCAPEYAAALKLYTEAAELGHSKAQTNLGSMYYFG
                     QGMTADYNEARKWFEKAAAKKDSMAFYNLACIHYSGHGVGPDNEKACRYLQEAINSGH
                     EQKSFLQELLQQWQNAV"
     gene            complement(3307..5193)
                     /gene="uvrC"
                     /locus_tag="WIX18_000443"
     CDS             complement(3307..5193)
                     /gene="uvrC"
                     /locus_tag="WIX18_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEZ5237599.1"
                     /translation="MPSETVFQVIDMNKETRFPEHFDIPLFLKNLPNLPGVYRFFNES
                     GNVLYVGKAVNLKRRVSGYFQKNDHSPRIALMVKQVHHIETTITRSESEALILENNFI
                     KALSPKYNILFRDDKSYPYLMLSGHQYPQMAYYRGTLKKPNQYFGPYPNSNAVRDSIQ
                     VLQKVFMLRTCEDSVFEHRDRPCLLYQIKRCSAPCVGHISEEDYHDSVREASTFLNGK
                     TDELTRTLQHKMQTAAANLQFEEAARYRDQIQALGIMQSNQFIDSKNPNNPNDIDLLA
                     LAVSDGIVCVHWVSIRGGRHVGDKSFFPDTKNDPEPNGQDYAEAFVAQHYLGKSKPDI
                     IISNFPMPDALKEALESEHGKQMQFVTKTIGERKVWLKMAEQNAQMAIAQRRLQQSSQ
                     QHRIDELAKILGMDSDGLNRLECFDISHTQGEATIASCVVYDEQNIQPSQYRRYNITT
                     AKPGDDYAAMREVLMRRYGKMQEAEANGETVKWPDVVLIDGGKGQIGVAVSVWEELGL
                     HIPLVGIAKGPERKAGMEELILPFTGEVFRLPPNSPALHLLQTVRDESHRFAITGHRK
                     KRDKARVTSSLSDIPGVGSKRRQALLTRFGGLRGVVAASKEDLEQVEGISKALAETIY
                     EHLH"
     gene            complement(5257..7419)
                     /locus_tag="WIX18_000444"
     CDS             complement(5257..7419)
                     /locus_tag="WIX18_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HEZ5237600.1"
                     /translation="MQQKIRFQIEGMTCQACASRIEKVLNKKDFVESAGVNFASEEAQ
                     VVFDDSKTSVADIAKIIEKTGYGAKEKTEDTLPQPEAEHHIGWRLWLLFTINVPFLIG
                     MAGMMIGRHDWMIPPLWQFALASVVQLWLTIPFYKSAWASIKGGLANMDVLVTIGTVS
                     IYLYSVYMLFFSPHAAHGMAHVYFEAGVMVIGFVSLGKFLEHRTKKSSLNSLGLLLKL
                     TPTQVNVQRNGEWKQLPIDQVQIGDLIRANHGERIAADGIIESGSGWADESHLTGESN
                     PEEKKAGGKVLAGALMTEGSVVYRATQLGSQTQLGDMMNALSEAQGSKAPIARVADKA
                     AAVFVPAVVGIALLTFIVTWLIKGDWTVALMHAVAVLVIACPCALGLATPAAIMVGMD
                     KAVKHGIWFKDAAAMEEAAHVDAVVLDKTGTLTEGRPQVAAVYCVPDSGFDEDDLYRI
                     AAAVEQNATHPLARAIVSAAQTRSLEIPAAQNAQTVVGAGIAAEVEDVGLVKAGKAEF
                     AELTLPEFSDGVWDIASIVAVSVDNKPIGAFALADALKADTAEAIGRLKKHNIDVYIM
                     SGDNQGTVEYVAKQLGIAHAFGNMSPRDKAAEVQKLKAAGKTVAMVGDGINDAPALAA
                     ANVSFAMKGGADVAEHTASATLMQHSVNQLADALLVSQATLKNIKQNLFFAFFYNILG
                     IPLAALGFLNPVIAGAAMAASSVSVLSNALRLKRVKID"
     gene            7558..8508
                     /gene="trxB"
                     /locus_tag="WIX18_000445"
     CDS             7558..8508
                     /gene="trxB"
                     /locus_tag="WIX18_000445"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEZ5237601.1"
                     /translation="MSQHRKLIILGSGPAGYTAAVYAARANLNPVIITGIAQGGQLMT
                     TTEVDNWPADADGVQGPELMARFLAHAERFGTEIIFDQINAVDLQKRPFTLKGDMGEY
                     TCDALIVATGASAKYLGLPSEEAFAGKGVSACATCDGFFYKNQDVAVVGGGNTAVEEA
                     LYLANIAKTVTLIHRRSEFRAEKIMIDKLMKRVEEGKIILKLESNLQEVLGDDRGVNG
                     ALLKNNDGSEQQIAVSGIFIAIGHKPNTDIFKGQLEMDEAGYLKTKGGTADNVGATNI
                     EGVWAAGDVKDHTYRQAITSAASGCQAALDAERWLGSQNI"
     gene            8664..9032
                     /gene="rpsF"
                     /locus_tag="WIX18_000446"
     CDS             8664..9032
                     /gene="rpsF"
                     /locus_tag="WIX18_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HEZ5237602.1"
                     /translation="MRHYEIVFIVHPDQSEQVPAMVERYKTMIAEANGKIHRLEDWGR
                     RQLAYPINKIHKAHYVLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPM
                     LGGEKAKNLLSGASEEAAAQ"
     gene            9033..9335
                     /gene="priB"
                     /locus_tag="WIX18_000447"
     CDS             9033..9335
                     /gene="priB"
                     /locus_tag="WIX18_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HEZ5237603.1"
                     /translation="MGFNNLVSLAALIEKVFPIRYTPAGISVLDIILKHESWQEENGQ
                     QCLVQLEIPARILGRQAEEWQYRQGVYVHVEGFLAQKSRRSLMPMLRIQNIQEYKG"
     gene            9342..9572
                     /locus_tag="WIX18_000448"
     CDS             9342..9572
                     /locus_tag="WIX18_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009120066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HEZ5237604.1"
                     /translation="MARQSFKRRKFCRFTAEKIQEVDYKQVDLLKDFISENGKIIPAR
                     ITGTKAFYQRQLAVAVKRARFLALLPYTDQHK"
     gene            9589..10041
                     /locus_tag="WIX18_000449"
     CDS             9589..10041
                     /locus_tag="WIX18_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HEZ5237605.1"
                     /translation="MQIILLEKIGGLGNLGDIVTVKNGYARNFLIPAGKAKRATEANM
                     KEFEARRAELEAKQAEILADAQARQEKLDGQTITVAQKAGVDGRLFGSVTNADIAAAI
                     VATGIEAVKANVRLPNGPLKAVGEYEVEVALHTDAVAKITVAVVAATE"
     gene            complement(10234..11040)
                     /locus_tag="WIX18_000450"
     CDS             complement(10234..11040)
                     /locus_tag="WIX18_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEZ5237606.1"
                     /translation="MWHWDIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQG
                     LAQHPYAQHLAVGTSFAVMVFTAFSSMLGQHKKQAVDWKTVFTMMPGMVFGVFAGALS
                     AKYIPAFGLQIFFILFLTAVAFKTLHTDPQTASRPLPGLPGLTAVSTLFGTMSSWVGI
                     GGGSLSVPFLIHCGFPAHKAIGTSSGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLY
                     LPAVAVLSAATIAFAPLGVKTAHKLSSAKLKKSFGIMLLLIAGKMLYNLL"
     gene            complement(11041..11787)
                     /gene="pssA"
                     /locus_tag="WIX18_000451"
     CDS             complement(11041..11787)
                     /gene="pssA"
                     /locus_tag="WIX18_000451"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HEZ5237607.1"
                     /translation="METPTNTPQRSLRQNSIYLLPNSFTIAALFSAFYAITQSMHGRY
                     ETAAIAVFISMLLDGMDGRVARLTNSQSAFGEQLDSLADMVSFGVAPALIAYKWQLWQ
                     FGKIGYSVAFIYCACAALRLALFNTLIGKVDKRWFIGVPSPTAAALIVGLIWVNHSVE
                     KFPAVHWWALGITLFAGLSMIVQIPFWSFKEINIRRQVPFVGMLLAVLLLLLVTWEPS
                     LVLFLFFLGYSLSGYIMAARRFWKKYRKAD"
     gene            complement(11861..12265)
                     /locus_tag="WIX18_000452"
     CDS             complement(11861..12265)
                     /locus_tag="WIX18_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237608.1"
                     /translation="MANRFQQRKSAYRRLSGKPLFSDGIAANLCGGRKTLSYNLSRFK
                     ISIRSEMQKISFNLLKPANSPKIGKRRPGLNGAPHIPMPSPRYLPASPEMPGNNIHPA
                     KIRNNTPGGRQSQTAPQSIRHQKNKPPPRASS"
     gene            12371..12853
                     /locus_tag="WIX18_000453"
     CDS             12371..12853
                     /locus_tag="WIX18_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4189 domain-containing protein"
                     /protein_id="HEZ5237609.1"
                     /translation="MMKKILAVSALCLMTAAARAADTYGYLAVWQNPQNADDVLQVKT
                     TKEDSTKSEAFSELEAFCKGQDTLAGIAEDEPTGCRSVVSLNNTCVALAYPKALGALR
                     VDNAVVITSPRFTSVHQVALNQCIKKYGVQGQCGLETVYCTSSSYYGGTVRSLIQNLK
                     "
     gene            complement(12905..14116)
                     /locus_tag="WIX18_000454"
     CDS             complement(12905..14116)
                     /locus_tag="WIX18_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease"
                     /protein_id="HEZ5237610.1"
                     /translation="MNQLKLAVSGAQILFVAFGAMVLVPLLTGLNPALALLGAGLGTL
                     LFQITTKRKVPIFLGSSFAFIAPIIYSIGEWGLPSTMFGLFAAGFMYFVFAVLIRWRG
                     LAAVHKLLPPVVIGPVIMVIGLSVAVAASSMAMGQADGKQVIDYTDSLILSGFTFAVT
                     AIVSVFGSRMMKLIPILIGVASGYVLALLMGLVDTASIAHAPWFAVPHFETPQVNWQA
                     ALFMLPVAVAPAIEHIGGIMAIGNVTGKDYTKDPGLDKTLAGDGLGVCVAGLIGGPPV
                     TTYGEVTGAVMITKNSNPVIMTWAAVFAVCMAFFGKFNAFLASIPMPVMGGIMLLLFG
                     TIASLGVKTLIDAKVDLMLPKNLVIVSSVLTTGIGGMTLKLGSFSFAGVGLCAVLAIM
                     LNSLLPDPKES"
     gene            14339..16777
                     /locus_tag="WIX18_000455"
     CDS             14339..16777
                     /locus_tag="WIX18_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HEZ5237611.1"
                     /translation="MTEKSHKKTAKGRAGSPSPTSARNKKADNGARGNKVSERLKAVK
                     ELQKTETKKARPEHVVNLIGDALWLMGLAATLYLAISLISFDMGDPSWSHSSPVVEDV
                     ANWGGLFGAYVADVGYYLFGWSFWWWIAAACVVLYKNFRLHAKQTENEAYNHKIAAAA
                     LFVLTVFSPVLEYFVLGGKYADSLPVGAGGMVGIRVGAVFAWLLGKSGSLLIILVVLL
                     LSLSLLVQISWLEFLNGAGRAVQNRLSALSGKVMALGKRRPNTKTDGVDTQNTRRMVK
                     EAKNITAKPVALPEGSSSNRKSVAVSVAPPPKIQVSLFEDDEPRQAGEYHKPTLNLLR
                     IPDSEPVSINPAELERTAELIESKLAEFGIGVQVVSATSGPVITRYEIEPAQGVKGSQ
                     IVALSKDLARSMSLQSVRIVETIAGKNTMGIELPNDKRQDVMLSEILSSPVFAEAKSK
                     LTVALGKDIAGTPVVGDLAKMPHLLVAGMTGSGKSVGVNGMIMSMLFKATPDEVRFIM
                     IDPKMLELSIYDGIPHLLCPVVTDMREAGQALNWCVAEMEKRYRLLSHAGVRNLEGFN
                     QKVEAAKAAGKPLLNPFSLNPDEPEPLEKLPLIVVVIDELADLMMTERKAVEQQIARL
                     AQKARAAGIHMIVATQRPSVDVVTGLIKANIPTRMAFTVQSKIDSRTILDQMGADELL
                     KYGDSLFLQPGSAEPTRLQGAFVSDDEVHQVVNYVKSQAPADYIEGLLSGEAALETAN
                     IVNPNADSDELFDQAVAYVLESKKTSISSLQRQLRIGYNRAANLMEALENAGVVSPTD
                     LNGSRKILAHKDHL"
     gene            16985..18295
                     /locus_tag="WIX18_000456"
     CDS             16985..18295
                     /locus_tag="WIX18_000456"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003742150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HEZ5237612.1"
                     /translation="MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGF
                     RPGKAPLKMIAQMYGASAQNDVINELVQRRFYDVAVAQELKVAGFPRFEGVEEQDDKE
                     SFKVAAIFEVFPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREAQ
                     NGDRVIIDFEGKIDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNF
                     PEDYHGKDVAGKTAMFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVKKNVS
                     REVERRVNEQTKESVMNALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAANL
                     DLPLDMFKEQAERRVSLGLILAKLVDENKLEPTEEQIKAVVANFAESYEDPQEVIDWY
                     YAEPSRLQAPTSLAIESNVVDFVLGKAKVNEKALSFDEVMGAQA"
     gene            18391..19005
                     /gene="clpP"
                     /locus_tag="WIX18_000457"
     CDS             18391..19005
                     /gene="clpP"
                     /locus_tag="WIX18_000457"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HEZ5237613.1"
                     /translation="MSFDNYLVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDES
                     ANLVVAQLLFLESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAAS
                     MGAFLLSAGEKGKRFALPNSRIMIHQPLISGGLGGQASDIEIHARELLKIKEKLNRLM
                     AKHCGRDLADLERDTDRDNFMSAEEAKEYGLIDQILENRASLQF"
     gene            complement(19062..20327)
                     /gene="ispG"
                     /locus_tag="WIX18_000458"
                     /gene_synonym="gcpE"
     CDS             complement(19062..20327)
                     /gene="ispG"
                     /locus_tag="WIX18_000458"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HEZ5237614.1"
                     /translation="MNTLQRRKTHQVRIDHITVGSEAPVVIQSMTNTDTADAKATALQ
                     IKELSDAGSEMVRITVNSPEAASKVAEIRRRLDDMGYATPLIGDFHFNGERLLAEFPE
                     CGKALSKYRINPGNVGKGVKGDEKFAFMIRTAAENDKAVRIGVNWGSLDQSLAKRMMD
                     ANLAFSAPKPPEEVTKEALIVSALESAEKAVLLGLPEDKIILSCKVSAVQDLIQVYRE
                     LGSRCAYPLHLGLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGSPRTQEV
                     VVGQEILQTMGLRSFTPMVTACPGCGRTTSTVFQELAQDVQNYLRQKMSIWRTLYPGV
                     ESLNVAVMGCVVNGPGESKLADIGISLPGTGETPVAPVYVDGERKVTLKGDNIATEFL
                     AIVEEYVKTNYGENGSKRNQNKIIPIQSL"
     gene            complement(20343..21104)
                     /gene="pilW"
                     /locus_tag="WIX18_000459"
     CDS             complement(20343..21104)
                     /gene="pilW"
                     /locus_tag="WIX18_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis/stability protein PilW"
                     /protein_id="HEZ5237615.1"
                     /translation="MPFKPSKRISLLLVLALGACSTSYRPSRAEKANQVSNIKTQLAM
                     EYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD
                     SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLA
                     EAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWK
                     IAKALGNAQAAYEYEAQLQANFPYSEELQTVLTGQ"
     gene            complement(21107..22201)
                     /gene="rlmN"
                     /locus_tag="WIX18_000460"
     CDS             complement(21107..22201)
                     /gene="rlmN"
                     /locus_tag="WIX18_000460"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEZ5237616.1"
                     /translation="MKTNLLNYDLQGLTRHFADMGEKPFRAKQVMRWMHQSGAQNFDE
                     MTDLAKSLRHKLNEQAGIEIPKLMMSQKSSDGTRKWLLDVGTGNGVETVFIPESDRGT
                     LCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQLWWANKAMGVTPKNERVISNVVM
                     MGMGEPMANFDNVVTALSIMLDDHGYGLSRRRVTVSTSGMVPQMDRLRDVMPVALAVS
                     LHASNDEVRNQIVPLNKKYPLKELMAACQRYLVKAPRDFITFEYVMLDGINDKAQHAR
                     ELIELVTDVPCKFNLIPFNPFPNSGYERSSNENIRVFRDILQQAGFVVTVRKTRGDDI
                     DAACGQLAGQVQDKTRRQQKWQQILIGQQG"
     gene            complement(22345..22770)
                     /gene="ndk"
                     /locus_tag="WIX18_000461"
     CDS             complement(22345..22770)
                     /gene="ndk"
                     /locus_tag="WIX18_000461"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEZ5237617.1"
                     /translation="MAIERTISIIKPDAVGKNVIGKIYSRFEENGLKIVAAKMKQLTL
                     KEAQEFYAVHKDRPFYAGLVEFMTGGPVMIQVLEGENAVLKNRELMGATNPSEAAEGT
                     IRADFATSVSINAVHGSDTPENAALEIAYFFSQTEICPR"
     gene            complement(22829..23980)
                     /locus_tag="WIX18_000462"
     CDS             complement(22829..23980)
                     /locus_tag="WIX18_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AFG1 family ATPase"
                     /protein_id="HEZ5237618.1"
                     /translation="MSSRDQLFKAPPFENHSPLTWYQAASQLPNFIRDDAQAAAIEHL
                     DRLWTELMMFKRKRNRFLGRSLRSPQVPKGLYFYGGVGRGKSFLMDAFFGCLPYRRKR
                     RVHFHAFMAEIHRRLKTLKSESNPLKSVAAEIAKETRVLCFDEFHVSDIADAMILGRL
                     LENLLNEGVVLVATSNYAPSELYPQGQNRSSFLPTIALIESSLTVLNVDGGEDYRLRT
                     LRPAEIFFTPANEENEAKLAKLFKEMTGITDLNPGISTIHGREIPHKAESGRAIWFDF
                     RALCFGPRSQSDYLYLAEHYEMVFISGLEQLSPQEKAEARRLTWLIDVLYDFRVKLCA
                     TGAVDVNHIYTEGDFAEEFTRTASRMVEMQSEVYLEQPHLTLSPKASGG"
BASE COUNT         5704 a         5854 c         6657 g         5943 t
ORIGIN      
        1 atcaagcggc acagccaata tttaatcggc ggcaaactca ggctttggca aaaacgcttt
       61 tgggaacata ctatccgcga tgaggccgat tttgcctgcc attttgatta tctgcatttc
      121 aatccggtca aacatggcta tgtaggacaa atttccgatt ggcggttttc tacgtttcac
      181 cgttatgtca aacagggtat ttatccgcat aattggggtg gcggcaatgc ggacttttct
      241 attgaatacg attaaagtaa tgtcggattc aagaatccga cctacggaaa actaaagatt
      301 ttatacgggc tacggcttgc tggcttatgc gttggcttaa tttgaaaaac agcacatcgg
      361 ttcataatac acaaggtatt agaacaaaag aagcagttga acagggattg cgtggtaata
      421 atagacctga aaaaggaata ggtaatagat ggaattatga tggatttata aaggaattag
      481 cgaagtaaca ggtattctaa atatttctga taaatataaa gaacaaggag taaaaaaatg
      541 aaagtaatca ctattacatt gtttactagc tgcatactat ctggatgcta tgggcttgaa
      601 tatggaatga gtggcggcat tcctcatgat gactgggcaa gaggtagcca tgttagtcaa
      661 gccaaagcag atgctgcgtg gaaagaatgt tctgacaaat atatgagaaa tggtggttca
      721 ggattagtag aacaatgtat gaatgataaa ggattaatac gtttatctga aatacgtcgt
      781 aggcaaaaga gagcagaaac acaaagagca gtaattaagt aacaataatg aaatactact
      841 gttcccgaac aaagcggcat ttacgcaggt gatgacggct atattttgaa aaatgccgtc
      901 tgtaagcaaa cgtgcttcag acggcatttt tttatccggc ggtctgttat ccgatccgtt
      961 tgaataccaa gtcccaaacg ccgtgtccga ggcgtttgcc gcgcgcttcg aatttggttt
     1021 cggggcggta gtccggggtg ggggcgtagt ctgccgccgt attttgcagg ctgtcgaagc
     1081 tgctgaggac ttcaagcatc tgctgcgcat attcttccca gtctgtcgcc aagtggatat
     1141 agccgccggt tttgagtttg ggcagcagtt tggcgatgaa gggggcttgt atcagacggc
     1201 gtttgtggtg gcgttttttg tgccacgggt cggggaagaa tatgtggatg ccgtcgagcg
     1261 agccgtcttg cagcatattt tcgacaactt ctacggcatc gtgccgcatc acgcggatgt
     1321 tttccaaatg gttttcttct atgagtttga gcagattgcc tacgccggga ccgtgtacgt
     1381 cgatggcaag aaagtcggtt tcgggcagcc tgcgggcgat ttctgcggtt gccgtcccca
     1441 taccgaagcc tatttcgagg attttgggtc ggctgcttcc gaaacgggca tcaagatcgg
     1501 ccggtgttgc ttggtagtcg atgccgaagc tgccccataa ggtatcgatg gcgcgttgct
     1561 gcgcggaggt catgtggctt tggcggagga cgaaactgcg gatgctgcgg gggtgttcgg
     1621 cttgccagtt gttttgtgtt tggttttcgg cggtgtctgt cataatgctt tcgtgcgctt
     1681 gtgcaatcag gatgccgtct gaatgtgaaa tgcctgttcg gacggcggga aaggaaaggg
     1741 gcgattatac ctgtttcgtt tcggcagggt aggtgtaacg ctgttcagac ggcattttgc
     1801 cactgttgca acagttcttg cagaaagctt ttttgttcgt gtccgctgtt tatggcttct
     1861 tgcaggtagc ggcaggcttt ttcgttgtcc ggcccgacac cgtgtccgct gtaatggatg
     1921 caggcgaggt tgtagaacgc catactgtct ttttttgcgg cggctttttc aaaccatttg
     1981 cgtgcttcat tgtagtcggc ggtcataccc tgtccgaagt aatacatgct gcccagattg
     2041 gtttgggctt tgctgtggcc gagttctgcg gcttctgtgt agagtttgag tgcggctgca
     2101 tattcgggcg cgcattgtaa tccgtaatgc agggcttggg ctttttgata aagccgttct
     2161 gccctttgcc gcctgatggc ggaatcttta atgccgccgt attggttagg atggtttaac
     2221 gcgctgtcgg atatgagttt ctgataggcg gaaaggctgc cggcttcggc tgcctgccga
     2281 taataatgcc gggctttttc cgtatcgggg gctatgccca aactgtagcg gcagatgtcg
     2341 cccagtatcc gcaaaccttc gggatggcgt tcggcggcgg ctgcttcggc atgatgcagg
     2401 gcaagtttgt ggtttctttc cagatgcttg ccttgtaggt agatgtcggc aagtgcggca
     2461 tgggcatcgg ggtcattttc ctgtgccgcc tgttggaacc ggtaaacggc ttcatcggga
     2521 gccgtaggta ggatgagttc ggcaagcggg gtgtaggcgg gaatgtatcc ttgttgtgcg
     2581 gcggcgcgca aatgattgat agcttgggtc gtgtcggttg gtgtaccttg tccgaaacgg
     2641 tattgaaggc cgagctgcca ttgtgccgcc gccaagcctt gtgctgcagc ctcgcggtag
     2701 agaaggtgtg ccgtttcaaa atccggtggc gtaccgtact ggcagtattg ggcaagcaga
     2761 tattgtccgt gggggttgtt gttttttgcg gtcgtttttg cccatttcag ggcttcttca
     2821 aaatgtcggg acgcatacag aaggtacatc aggcggactt gtgcttcggg cagtccttcc
     2881 tctgccaacg gtctgtaaag cggtatcagg gtttccgggc gcgcgccttc caattcttgg
     2941 atatatgcca gattgtaacg cgcgtaggga tgcccctgtt cggcggcgat gcggagcatt
     3001 tccatacctt gttcgcggtc ttggtgcggg ctgtccgcgt ccatcaggtg ttttgctaac
     3061 tcgaatgcgg cggcgggatg acctgccgag gccgcttctg tcagcaggcg gcggacttcg
     3121 gtaaagtcat attgttcttg agacaggcgt tctaaggctt gatgatagag taagtcggga
     3181 ttgttcatat cagatcgttt tccgttttgt caaatcatcg ttattcgtta tgaagttagg
     3241 tttatatcgg cacgcctgcc tactgtatca tattttttac agacggattt tgtctttgaa
     3301 agcatgctaa tgcagatgct cgtaaatggt ttccgccaat gccttgctga tgccttcgac
     3361 ttgttccaaa tcttctttgc tggcggcaac gacaccgcgc aggccgccga agcgggtgag
     3421 cagggcctgg cggcgtttgc tgcctacgcc ggggatgtcg cttaaggagg aggtaacgcg
     3481 tgctttgtcg cgttttttgc ggtggcctgt aatggcaaag cggtgtgatt cgtcgcgcac
     3541 ggtttgcaat agatgcaagg ccgggctgtt gggcggcagg cggaagactt cgccggtaaa
     3601 aggcagtatg agttcttcca taccggcttt gcgctcaggg cctttggcga tgccgaccaa
     3661 gggaatgtgc agaccgagtt cttcccatac ggatacggcg acgccgattt gtcctttgcc
     3721 gccgtcaatc aatacgacat ccggccattt gacggtctcg ccgttggctt cggcttcctg
     3781 cattttgccg taacggcgca tcaatacttc gcgcatggcg gcgtagtcgt cgccgggctt
     3841 ggcggtcgtg atgttgtagc ggcggtattg cgaaggctgg atgttttgct catcgtacac
     3901 gacgcaggac gcaatagtgg cctcgccttg tgtgtggctg atgtcgaaac attcgaggcg
     3961 gttgaggccg tctgaatcca taccgaggat tttggcgagt tcgtcgatac ggtgttgctg
     4021 gctgctttgt tgcaggcggc gttgggcaat tgccatttgt gcgttttgct ccgccatttt
     4081 caaccagact ttgcgttcgc ctatggtttt ggtaacgaac tgcatttgtt tgccgtgttc
     4141 gctctctagg gcttctttca atgcgtcggg catggggaag ttgctgatga tgatgtcggg
     4201 tttgcttttg cccagatagt gttgggcgac gaaggcttcg gcgtagtctt gtccgtttgg
     4261 ttcgggatcg tttttggtgt cagggaaaaa acttttatcg ccgacgtgcc gtccgccgcg
     4321 gatgctgacc cagtgtacgc agacgatgcc gtctgaaacc gccagcgcga gcaggtcgat
     4381 atcgttggga ttgttcggat ttttactgtc gataaactga ttactctgca tgatgccgag
     4441 tgcttggatt tggtcgcggt agcgggcggc ttcttcaaac tgcaaattcg cggcggcggt
     4501 ctgcattttg tgttgcaggg tgcgggtcag ttcgtcggtc ttgccgttga gaaaagtcga
     4561 ggcctcgcgc acgctgtcgt ggtagtcttc ttcgctgata tggccgacac agggtgcgct
     4621 gcagcgtttg atttgataca gcaggcaagg gcggtcgcgg tgttcgaaca cgctgtcttc
     4681 gcaggtgcgc agcatgaaga ctttttgcag gacttggatg ctgtcgcgca cggcgttgct
     4741 gttaggatat gggccgaaat attgattagg ctttttcagc gtgccgcggt aatacgccat
     4801 ttgcggatat tgatggccgc tgagcatcaa ataaggatag cttttgtcat cgcggaaaag
     4861 aatattgtat ttgggcgaca gggctttgat gaagttgttt tcgagaatca gggcttcgga
     4921 ttcggagcgg gtgatggtgg tttcgatgtg gtgaacctgt ttcaccatca atgcgatgcg
     4981 cggggaatgg tcgtttttct ggaaatagcc ggacacgcgc cgcttgaggt tgacggcttt
     5041 gccgacgtat aagacgttgc cgctttcgtt gaaaaaacgg tatacgcctg gcaggttggg
     5101 caggtttttg aggaaaagtg ggatgtcgaa gtgttccgga aaacgggttt ctttattcat
     5161 atcaattact tgaaaaacgg tttcagacgg catattacca tatcgctgga gacagcctta
     5221 tccgttcgga caaggctgca gggcggttac atgctgctaa tcgattttta cccgtttcag
     5281 gcgcaaggca ttgctcaaca cggaaaccga gcttgccgcc attgccgcgc cagcgatgac
     5341 gggatttaaa aagccaagcg cggcgagagg aatgcccaag atattgtaga agaaggcgaa
     5401 aaacaggttt tgcttgatgt ttttcaaagt ggcttgcgac accagcagag catcggcgag
     5461 ttggttgacc gaatgctgca tcagcgtggc ggatgcggta tgttcggcaa cgtccgctcc
     5521 gcctttcatg gcgaagctga cgttagcggc ggcaagcgcg ggcgcgtcgt tgatgccgtc
     5581 gccgaccatc gccacggttt tgccggcggc tttgagtttt tgcacttcgg cagctttatc
     5641 gcgcggactc atgttgccga aggcgtgtgc gatgcccagt tgtttggcga cgtattcgac
     5701 cgtgccttgg ttgtcgccgc tcataatata gacatcgata ttgtgttttt tcagacggcc
     5761 tatggcttcg gcggtatcgg ctttcaacgc gtcggcaagt gcgaatgcgc cgatgggttt
     5821 gttatcgacc gagactgcaa caatgcttgc aatgtcccaa acgccgtctg aaaactcggg
     5881 caaggtaagt tcggcaaatt cggctttgcc tgctttcacc aaacccacgt cttccacttc
     5941 ggcggcaatg cctgcgccga caacggtttg agcgttttgt gcggcaggga tttccaagct
     6001 gcgcgtttgg gcggcggaaa cgatggcacg ggcaagcgga tgagtggcgt tttgttcgac
     6061 ggcagcggcg atgcggtaca aatcgtcttc gtcaaagccg ctgtcgggaa cacaataaac
     6121 ggcggcaacc tgcggcctgc cttcggtcag cgtgccagtt ttgtccaaca caacggcatc
     6181 gacgtgggcg gcttcttcca ttgccgctgc gtctttaaac caaatgccgt gtttcactgc
     6241 tttatccatg ccgaccataa tcgcggcggg tgtagccaga ccgagcgcac acgggcaggc
     6301 aatcaccaaa acggcgacgg cgtgcatcag cgcaaccgtc caatcgccct taatcagcca
     6361 agtaacaata aaagtcaaca acgcaatgcc cacgacggca ggcacgaata ccgcagccgc
     6421 tttatcggct acgcgcgcaa tcggtgcttt actgccttgt gcttcagaga gcgcgttcat
     6481 catgtcgccg agctgggttt ggctgccgag ctgcgtggcg cggtacacca cactgccttc
     6541 ggtcattaac gcgcccgcca acactttgcc gcccgccttt ttttcttcag gattggattc
     6601 gccggtaaga tggctctcgt ccgcccaacc gctgccgctt tcaatgatgc cgtctgcggc
     6661 aatgcgttcg ccgtggttgg cgcggataag gtcgccgatt tgcacttggt cgatgggaag
     6721 ctgtttccat tcgccgttgc gttgcacgtt gacttgggtt ggtgtaagtt tcaaaagcag
     6781 gcccaagctg ttcaggctgg attttttggt acggtgttcc aaaaatttgc ccagcgacac
     6841 aaaaccgatc accatcacgc ctgcttcaaa atacacatgc gccatgccgt gtgccgcatg
     6901 cggactgaaa aataacatat agacggaata cagataaatc gataccgtgc cgatggtaac
     6961 gagcacgtcc atattcgcca atccaccttt aatactcgcc cacgcgcttt tgtaaaacgg
     7021 gattgtcagc caaagctgca ccacactcgc caatgcgaac tgccacaacg gcggaatcat
     7081 ccaatcgtgt ctgccgatca tcatccccgc catgccgata aggaacggga cgttgatggt
     7141 gaacagcagc cacagccgcc agccgatatg gtgttctgct tcgggttgcg gcaatgtatc
     7201 ttccgttttt tccttcgcgc cgtaaccggt tttctcaatg attttggcaa tgtcggctac
     7261 tgaggttttg ctgtcgtcaa acactacctg cgcctcctcg ctggcgaagt tcactcccgc
     7321 cgattcgaca aaatcttttt tgttcaacac tttttcaata cgcgaagcac atgcctgaca
     7381 ggtcatgcct tcgatttgga aacggatttt ttgttgcata agcgtgattc ctgctttgat
     7441 attcagacgg cagtcaaggt tgcgggatgc cgtctgaacg cccgtatggt cgaaatttct
     7501 caaacgcgcc gataattcga gtagaatccg aaaacttgac acagcaaagg aaaaacaatg
     7561 tcccaacacc gcaaactgat tattttgggt tccggccccg ccggatacac cgccgctgtc
     7621 tatgccgcgc gcgccaattt aaaccccgtc attattacag gtatcgcgca aggcgggcaa
     7681 ctgatgacca ccaccgaagt ggacaactgg cctgccgatg ccgacggcgt gcaagggccg
     7741 gaattgatgg cgcggtttct cgcccacgcc gaacgtttcg gaacggaaat catttttgac
     7801 caaatcaacg ccgtcgatct gcaaaaacgc ccgtttacac tcaaaggcga tatgggcgag
     7861 tacacttgcg atgccctgat tgtcgcaaca ggcgcgtccg ccaaatacct tggtttgccg
     7921 agtgaggaag cgtttgcagg gaaaggcgtt tccgcttgtg ccacctgcga cggtttcttc
     7981 tacaaaaacc aagatgttgc cgtagttggc ggcggcaata cggcagttga agaggcactc
     8041 taccttgcca atatcgccaa aaccgttacc ctgatccacc gccgcagcga gttccgtgcc
     8101 gaaaaaatca tgatcgacaa actgatgaaa cgcgtggaag agggcaaaat catcctcaag
     8161 ctggaaagca acctgcaaga agtactgggc gacgatcggg gcgtaaacgg cgcattatta
     8221 aaaaacaacg acggttctga gcaacaaatt gccgtcagcg gcatttttat cgccatcggg
     8281 cacaagccga ataccgatat tttcaaaggt cagttggaaa tggacgaagc tggttacctg
     8341 aaaaccaaag gcggcacggc ggacaatgtc ggcgcaacca atatcgaagg cgtatgggcg
     8401 gcgggcgacg taaaagacca tacctaccgt caggcgatta ccagcgcggc ttccggctgt
     8461 caggcggctt tggacgcgga acgctggctg ggcagccaaa acatttgaat gccgtctgaa
     8521 accgaaattt tcggcggaat gcaaattttt cgcaccaaat ccttgattcc gtcggcaaac
     8581 cccaatataa tgcctgctct ttgaaccttg ccttctgctt tcgcatggca gaaggctgtt
     8641 tttaccatcc ataaggagat aacatgcgtc attacgagat cgtgtttatc gttcatcctg
     8701 atcaaagcga gcaagtgcct gctatggttg aacgttacaa aaccatgatt gccgaagcaa
     8761 acggtaagat tcaccgtttg gaagattggg gtcgccgcca actggcttac ccgattaaca
     8821 aaatccataa agcccattac gttttgatga acatcgaaac cactcccgaa gtggttgaag
     8881 agttggaaac cgcattccgt ttcaatgatg cggtattgcg ccatctaacc atcaaaacca
     8941 aacacgccgt taccgaagca tcccctatgt tgggtggtga aaaggctaag aacctgctga
     9001 gcggtgcgtc tgaagaagcg gctgcccaat aattgggatt caataatctt gtttcgcttg
     9061 ccgcgttgat tgaaaaggtt ttccctattc gatatacgcc tgccggaatc tctgtcttag
     9121 atattatttt aaagcatgaa tcatggcagg aggaaaacgg gcagcaatgc cttgtccaat
     9181 tggaaattcc ggcacggatt ttaggcaggc aggcggaaga gtggcagtat cggcaaggtg
     9241 tatatgttca cgtcgaaggt tttttagctc aaaaaagcag acgttccctt atgccgatgc
     9301 tcaggataca aaatattcaa gaatataaag gttaaacgac aatggctcgt caatcattca
     9361 aacgtagaaa attctgccgt ttcacggctg aaaaaatcca agaagtcgat tacaaacaag
     9421 ttgatttgct gaaagacttt atctctgaaa acggtaaaat cattcctgca cgcatcacag
     9481 gaacgaaggc attctaccaa cgccaattgg ctgttgccgt aaaacgcgca cgcttcctgg
     9541 ctctgctgcc ttacaccgac caacacaaat aattttggag attgaatcat gcaaattatt
     9601 ctgttagaaa aaatcggcgg tttgggcaac ttgggcgaca tcgtaaccgt taaaaacggc
     9661 tatgcccgca acttcttgat tcctgctggt aaggcaaaac gtgctactga agcaaacatg
     9721 aaagagtttg aagcacgccg tgccgaattg gaagccaaac aggccgaaat tttggcagat
     9781 gcccaagccc gtcaggaaaa attggatggc caaaccatta ccgttgcaca aaaagccggt
     9841 gtggacggtc gtctgtttgg ttccgttacc aatgctgata ttgcggctgc aatcgttgcg
     9901 actggcatcg aagccgtgaa agcaaatgta cgtctgccga acggtcctct gaaagccgtt
     9961 ggcgagtacg aagtggaagt ggctttgcac actgatgccg ttgctaaaat taccgttgcc
    10021 gtcgttgccg caaccgagta attgaaatta tcagatgccg tctgaaaccc tgccgattgt
    10081 cggaatgtgg tttcagacgg tatttgtttt gttttccgta tattctgcaa aggtctcggt
    10141 caggttgtct gtccttttgt cggaacagga gactgggcag ctttgtcctg attaattact
    10201 tgtgcaaacg gtaaaaaggt tttttcgtgt gttttaaagc aggttgtaca gcatttttcc
    10261 ggcaatcaaa agcaacataa tgccgaagga ttttttgagt ttggcagaag aaagtttgtg
    10321 ggcggttttg acaccgagcg gggcaaaggc aatggttgcc gcgctgagga cggcgacggc
    10381 gggcaggtaa aggaagccca gtgacccttc gggcaatcct gcaatattca ggccgttgag
    10441 cagatacgat attgcgccgg agagtgcaat cggccaggca aggccggatg atgtgccgat
    10501 ggctttatgg gcggggaagc cgcagtggat taagaagggg acggaaagtg aaccgccgcc
    10561 tatgccgacc cagctcgaca ttgtgccgaa cagtgtggaa accgcagtca gtccgggcag
    10621 tccgggcagc gggcgggatg ccgtctgagg gtcggtatgc agtgttttga atgcgacggc
    10681 ggttaaaaac aggatgaaga aaatttgaag cccgaacgct gggatatatt ttgcggagag
    10741 tgcgccagcg aatacgccga ataccatacc cggcatcatc gtaaatacgg ttttccagtc
    10801 gaccgcctgt tttttgtgct gccccagcat actggaaaag gcggtgaaga ccatgacggc
    10861 gaaggatgtg ccgacggcga ggtgttgcgc gtaaggatgt tgtgccaaac cctgcaaatc
    10921 aagcacccat aaaacgacag ggacaatcag cgtgccgccg cctacgccga acaggccggc
    10981 aataaaacct gccgcactgc ctacggcaag caggattaag ataatgtccc aatgccacat
    11041 ttaatccgcc tttctgtatt ttttccagaa tcggcgtgcc gccataatgt agccggacag
    11101 gctgtatccg agaaagaaca ggaagaggac gagcgacggt tcccaagtga ccagaagcag
    11161 cagtaagacg gcaagcagca ttccgacaaa ggggacttgt ctgcggatgt tgatttcttt
    11221 aaaactccaa aaagggattt ggacaatcat cgacaggccg gcaaacagtg tgatgcccaa
    11281 tgcccaccag tggacggcgg ggaatttttc gacgctgtgg ttgacccaaa tcagcccgac
    11341 aatcagcgcg gcggcagtcg gactgggcac gccgataaac cagcgtttgt ccaccttgcc
    11401 gatgagcgtg ttgaacagcg caaggcgcag ggcggcgcag gcgcagtaga tgaaggcgac
    11461 ggaataaccg attttgccga actgccaaag ctgccatttg taggcaatca gagcgggagc
    11521 aacgccgaag ctgaccatat cggcaaggct gtcgagctgc tccccgaacg cgctttggct
    11581 gttggtcagc cgcgccacgc gcccgtccat accgtccagc aacatagaga tgaataccgc
    11641 gatggcggcg gtttcataac gtccgtgcat ggattgggtg attgcgtaaa atgcggaaaa
    11701 cagcgcggcg atggtaaagg agttgggcag caggtagata ctgttttgac gcagggagcg
    11761 ttgcggggtg ttggtcgggg tttccatagc tgaagtgtct cacggacgtg gagaatcgat
    11821 aggggattat aacccaaacc attatcgaac aatacgccct ttaggatgaa gccctcggag
    11881 gcggtttgtt tttctgatgg cggatgcttt gcggggcggt ttgactctgc ctgccaccgg
    11941 gtgtgttgtt tcggattttt gccggatgga tattgttgcc gggcatttct gggcttgccg
    12001 gaaggtatcg gggggagggc atcggaatat gcggcgcacc gttcaaaccg gggcggcgtt
    12061 tccctatttt cggggagttt gcaggcttca acaaattgaa agatattttt tgcatttccg
    12121 accgtatgct gattttgaaa cgggataaat tataggacaa ggtttttcgc ccgccgcaaa
    12181 ggttggccgc aatgccgtct gaaaacaacg gcttgccgct aaggcggcgg tatgcggatt
    12241 tgcgctgctg aaatcggttt gccatacccg gcggtgcaat ctgcggggag ggataagccg
    12301 ataaggcggg acttatcctg ttttttgttt ataatgcaac agaatttgga cgaaccgtcg
    12361 ggaatttatc atgatgaaaa agatactggc cgtatcggca ctatgcctga tgactgcggc
    12421 ggcacgggct gccgatactt acggctatct cgccgtttgg cagaatccgc agaatgcgga
    12481 cgatgttttg caggttaaaa ccacaaaaga agattcgacg aaaagcgaag cgttttccga
    12541 gttggaagcc ttctgcaaag gtcaggacac gcttgcgggc attgctgaag acgagccgac
    12601 cggatgccgg tcggtcgtgt cgctgaacaa tacctgtgtc gcgctggcat acccgaaagc
    12661 cttgggcgcg ctgcgtgtcg acaacgccgt cgtgattact tctccgcgtt ttacgagcgt
    12721 tcatcaggtc gcactcaacc agtgcatcaa aaaatacggc gtacagggac aatgcggctt
    12781 ggaaacagtg tattgcacat cttcttctta ttacggcgga actgtgcgct ctttgattca
    12841 aaatctcaaa taaaacggaa aatgccgtct gaaagatgtt cagacggcat ttctatatcg
    12901 acggtcagga ttctttcgga tcgggcagca ggctgttcaa cataatggca agtacggcgc
    12961 acaagcccac gccggcaaag ctgaagctgc ccaatttgag cgtcatgccg ccgatgcccg
    13021 tggtcagtac cgagctgacg atgaccaggt ttttcggcag catcaaatcg actttggcat
    13081 caatcagcgt tttcacgccc aaagaagcaa tcgtgccgaa cagcagcagc ataatgccgc
    13141 ccattactgg catcggaatg gaagccaaaa acgcattgaa tttgccgaaa aacgccatgc
    13201 agacggcaaa aaccgccgcc caagtcatga tgacggggtt gctgtttttg gtaatcatca
    13261 ccgcacccgt tacttcgccg taggtcgtaa ccggcgggcc gccgatcaga cccgcaacgc
    13321 acacgcccaa accgtcgcct gcaagggttt tgtccaagcc cgggtctttc gtatagtctt
    13381 tccccgtcac attgccgatt gccatgatgc cgccgatgtg ttcgatggcg ggggcgacgg
    13441 caacgggcag cataaacagt gccgcctgcc agttgacctg aggcgtttca aaatggggaa
    13501 cggcgaacca gggcgcgtgt gcaatgcttg ccgtgtccac cagtcccatc agcagtgcca
    13561 aaacataacc cgaagcgaca ccgatcaaga taggaatcag cttcatcatc ctgctgccga
    13621 aaaccgatac gatggcggta acggcaaagg taaagccgga aagaatcagt gaatcggtat
    13681 agtcgatgac ctgtttgccg tccgcctgac ccattgccat gctgcttgcc gccacggcaa
    13741 cagacagacc gatgaccatg atgacggggc cgatgacgac cggcggcagc agtttgtgta
    13801 ccgccgccag tccgcgccaa cgaattagca cggcaaacac aaaatacata aagccggcgg
    13861 caaacagtcc gaacatggtg gaaggcagcc cccattctcc gatggagtag ataatcggtg
    13921 cgataaaggc aaacgaagaa ccgagaaaaa tcggcacttt acgtttggtt gtaatttgga
    13981 acagcagcgt tcccaagcct gcgcccaaaa gcgcaagagc cggattcaga ccggtcagca
    14041 ggggaaccag caccattgcg ccgaatgcca caaataaaat ctgtgcaccg gaaacggcaa
    14101 gtttcagttg gttcatacca tcttctttca atcggttcaa acggcacgga ttatactggt
    14161 ttgccgaggg tctgcgtaaa aatacatacg tcgggcaaca gatatgccgt ctgaaaggca
    14221 atgtctgtct gttgcaggat gaaagcagga gaaatggagt ataatccgac actttccata
    14281 ttcaatccgc aagccgtccg gcttccttat ttcagacggc attttccggt aatacggcat
    14341 gacagaaaaa tcccataaaa aaacagcaaa aggcagggcg ggaagcccgt ccccaacgtc
    14401 cgcacgcaac aagaaagccg acaacggcgc acggggcaat aaagtttccg agcggctcaa
    14461 ggcggtcaaa gagttgcaga aaaccgaaac caaaaaggcg cgtcccgaac atgtcgtcaa
    14521 ccttatcggc gacgcactgt ggctgatggg tttggcggca accctgtatt tggcgatttc
    14581 cctgatcagt ttcgatatgg gcgatccgtc ttggtcgcac agttcgccgg ttgtggaaga
    14641 tgtcgccaat tggggcggac tgttcggcgc gtatgttgcc gatgtcggct attatctttt
    14701 cggctggtcg ttctggtggt ggatagcggc tgcctgcgtc gtgctgtata aaaatttccg
    14761 cctgcacgca aaacagacgg aaaacgaggc atacaaccac aaaatcgctg ccgccgcgct
    14821 gtttgtcctg acggtcttca gccccgtctt ggagtatttt gtgctgggcg gaaaatatgc
    14881 cgactccctg cctgtcggag caggcggtat ggtcggcata cgcgtcggcg cagtgtttgc
    14941 gtggctgctg gggaaatcgg gcagcctgct gattatcttg gttgttctgc tgttgtcgtt
    15001 gtccctactg gtgcagattt catggctgga atttttgaac ggtgcaggca gggcggttca
    15061 aaaccgcctg agtgccttat ccggcaaggt catggcttta ggaaaacgcc ggccgaatac
    15121 caaaacagac ggtgtcgata cccaaaatac acggcgcatg gtaaaagaag ccaagaatat
    15181 tacggccaaa cccgttgcct tgcccgaagg cagcagcagc aaccgcaaat ccgtcgcggt
    15241 ttccgtcgcg ccgccgccca aaattcaggt ttctctgttt gaagatgacg aacctcggca
    15301 ggcgggcgaa taccacaagc ctacattgaa cctattgcgg attcccgaca gcgagcccgt
    15361 cagcatcaat cccgccgaat tggagcgcac tgccgaacta atcgaatcca agctggcaga
    15421 attcggcatc ggcgtacaag tcgtatccgc cacatccggc cccgtcatca cgcgctacga
    15481 aatcgaaccc gcgcaaggtg tcaaaggcag ccaaattgtt gccttgtcga aagatttggc
    15541 acgctctatg tcgctgcaat ccgtgcgtat cgtcgaaacc atcgccggga aaaacacgat
    15601 gggcatcgag ttgcccaacg acaaacgcca agacgtgatg ttgagcgaaa tcttgtcctc
    15661 gcccgtgttt gccgaagcca aatccaagct gaccgtcgcg ctgggcaaag acattgccgg
    15721 tacccccgtt gtcggcgact tggcgaaaat gccgcacctt ttggtcgccg gtatgactgg
    15781 ttcgggcaag tccgtcggcg tgaacggcat gattatgtct atgcttttca aagctacgcc
    15841 cgacgaagtc cgcttcatta tgatagaccc gaaaatgctc gagttgagca tttacgacgg
    15901 cattccgcac ctgctctgtc ccgtcgtgac cgatatgcgc gaagcagggc aggcgttgaa
    15961 ctggtgcgtc gccgaaatgg aaaaacgcta ccgcctgctt tcccacgccg gtgtacgcaa
    16021 tctggaaggc ttcaaccaaa aagtcgaagc cgcaaaagcg gcaggcaagc ctttgcttaa
    16081 tccgttcagc ctgaaccccg acgagcccga gccgctggaa aaactgccgt tgattgtggt
    16141 cgttatcgac gaacttgccg acctgatgat gaccgaacgc aaagccgtcg aacagcaaat
    16201 cgcccgtctc gcccaaaaag cgcgcgccgc cggtatccat atgattgtcg cgacccaacg
    16261 tcccagtgtc gatgtcgtta ccggcctgat taaagccaac atcccgacgc gtatggcgtt
    16321 taccgtgcaa agcaaaatcg acagccgtac catcctcgac caaatgggcg cggacgaact
    16381 gctcaaatat ggcgattcgc tgttccttca gcccggcagt gccgaaccga cccgcctgca
    16441 aggcgcgttt gtttcagacg acgaagtaca tcaagtcgtc aactacgtca aatcgcaagc
    16501 cccagccgac tatattgaag gtctgctcag cggcgaggcc gcgctggaaa ctgccaatat
    16561 cgttaatccg aatgcagaca gcgacgaatt gttcgatcag gcagtcgcct atgttttgga
    16621 aagcaaaaaa acctccattt cgtctttgca gcggcagttg cgtatcggct ataaccgcgc
    16681 ggcaaacctg atggaggcac tggaaaatgc gggtgtcgtt tctcccaccg acctcaacgg
    16741 cagccgtaaa attttggcgc acaaggacca tttgtagccc gtattgcaaa atgccgtctg
    16801 aacggcggaa ttggcgtttc agacggcata ttatgtttca ggcgaaacat tgtgatatac
    16861 ttgccagcta aaatttcccc tttgcggcaa tgcggttcaa atatcgtacc gttgcgctgt
    16921 ttgcttcccc atgtagggaa gaaagtttat cattttatca acacaacaaa tttaagggct
    16981 tatgatgagc gtaactgttg aaactttaga aaatctggaa cgcaaagtag tgttgtccct
    17041 gccttggtcc gaaatcaacg cagaaaccga taaaaaactg aaacaaactc aacgccgtgc
    17101 aaaaatcgac ggtttccgtc cgggtaaagc acctttaaaa atgattgccc aaatgtacgg
    17161 tgcgagcgca caaaacgacg tgatcaacga gctggtgcaa cgccgcttct acgatgttgc
    17221 cgttgcccaa gagttgaaag tggcaggctt cccccgtttt gaaggcgttg aagaacaaga
    17281 cgataaagag tctttcaaag ttgccgccat ttttgaagtg ttccccgaag tcgttatcgg
    17341 cgatttgtct gcacaagaag ttgaaaaagt aaccgcttcc gtcggtgatg ccgaagtgga
    17401 ccaaaccgta gaaatcctgc gcaaacaacg tacccgcttc aaccatgtcg aacgcgaagc
    17461 tcaaaacggc gaccgcgtca tcattgactt tgaaggcaaa atcgacggcg aaccttttgc
    17521 aggcggcgca tccaaaaact acgccttcgt attgggcgca agtcaaatgc tgcctgaatt
    17581 tgaagccggc gtagtcggca tgaaggctgg cgaaagtaaa gacgttaccg tcaatttccc
    17641 tgaagactac cacggtaaag acgttgccgg taaaactgcc atgttcacca ttacgctgaa
    17701 caacgtttcc gaagcgactc tgcctgaagt cgatgcagat tttgcaaaag ccttgggtat
    17761 tgcggatggc gacgttgcca aaatgcgcga agaagtgaag aaaaacgtaa gccgcgaagt
    17821 ggaacgccgc gtaaacgaac aaaccaaaga atccgtaatg aacgcgctgc tcaaagccgt
    17881 agagctgaaa gcacctgttg ctttggtaaa tgaagaagcc gcacgcttgg caaacgaaat
    17941 gaaacaaaat tttgttaacc aaggtatggc tgatgctgcc aacttggatc tgcctttgga
    18001 tatgtttaaa gaacaagccg aacgccgcgt gtctttgggt ctgattttgg ccaaactggt
    18061 tgatgaaaac aaactggaac cgactgagga gcaaatcaaa gccgttgtcg ccaacttcgc
    18121 agaaagctac gaagatcctc aagaagtaat cgactggtac tacgcagagc cttcccgcct
    18181 gcaagccccg acttctttgg cgatagaaag caacgtcgtt gatttcgttt tgggtaaagc
    18241 caaagtaaac gaaaaagctt tgtcttttga cgaagtgatg ggcgcgcaag cctgattatc
    18301 ctgaaaatgc cgtcttaggg cagtttttga aagcaccgaa gccgctttta aagcccgctt
    18361 tggtgctttt acatcatgaa aggagacgaa atgtcttttg ataactatct tgtccctacc
    18421 gttatcgagc agagcggtcg cggtgagcgt gcattcgata tctattctcg gcttttgaaa
    18481 gagcgcatcg tattcttggt cggcccggta accgacgagt ccgccaatct ggtggttgcc
    18541 caactgttgt ttttggaaag tgagaatccg gataaggata ttttcttcta tattaactcg
    18601 ccaggcggtt cggtaacggc cggtatgtcg atttacgaca ccatgaattt tatcaagccc
    18661 gatgtatcga ctttgtgctt ggggcaggca gcaagtatgg gcgcgttctt attgtcggca
    18721 ggcgaaaaag gcaaacgttt cgccctgccc aacagccgga ttatgattca ccagccttta
    18781 atcagcggcg gcttgggcgg tcaggcatcc gatattgaaa ttcacgcacg cgaactgttg
    18841 aaaatcaaag aaaaactcaa ccgcctgatg gcgaaacatt gcggccgcga tttggcagat
    18901 ttggagcgcg acaccgaccg tgataatttc atgtccgccg aagaggctaa agaatatggt
    18961 ctgattgatc aaatcttgga gaaccgtgct tctttacagt tttaataaga aatctgagag
    19021 aaacaaatgc cgtctgaaaa cagttcagga cggcatttgt cttataggga ctgtataggg
    19081 atgattttgt tctggttgcg tttggagccg ttttcaccat agttggtttt gacatattcc
    19141 tctacaatag ctaggaattc agttgcaata ttatcacctt tcagtgtgac tttgcgctcc
    19201 ccgtccacat aaaccggcgc gacgggtgtt tcccccgtac cgggcaggct gatgccgatg
    19261 tcggccaatt tgctttctcc gggcccattg acaacgcagc ccattacggc aacgttcagg
    19321 gattcaaccc cgggataaag ggtacgccat atagacattt tttggcgcag gtaattttga
    19381 acatcttgtg ccagctcttg aaatacggta ctggtggtac gcccgcagcc ggggcaggcg
    19441 gtaaccatcg gcgtaaacga acgcaatccc atagtctgta aaatctcttg cccgacgacg
    19501 acctcctgag tacgcgggct gccaggttcc ggagtcagtg aaatgcggat ggtgtcgccg
    19561 attccttctt gaagcaagac ggataatgcc gccgttgatg cgacaatgcc tttgctgccc
    19621 ataccggctt cggtcaaacc caaatgcagc ggataggcgc aacggctgcc cagttcgcgg
    19681 taaacctgaa tcaaatcctg aaccgcgctg actttgcacg acaggatgat tttgtcttcg
    19741 ggcagtccca atagaacggc tttttcggca gattccaaag cggagacaat cagtgcttcc
    19801 ttcgtcactt cttcgggcgg tttcggcgcg gaaaaagcga ggttggcatc catcatacgt
    19861 ttggcgaggc tttgatccaa agaaccccag tttacgccga tgcggacggc tttatcgttt
    19921 tcagcagcag tccgaatcat aaaggcaaat ttttcatcgc cttttacgcc tttgccgaca
    19981 ttgccgggat tgatgcggta tttggacaat gctttgccgc attcgggaaa ttccgccaac
    20041 aggcgttcgc cgttgaagtg gaaatcgccg ataagcggtg tggcatagcc catatcgtcc
    20101 aagcggcggc ggatttcggc aactttggac gcggcttcgg ggctgttgac ggtaatacgc
    20161 accatttcgg atccggcatc gctcaattcc ttaatctgca atgcggtggc ttttgcatcg
    20221 gcagtgtcgg tgttggtcat agattggata acgacgggtg cttctgaacc gacggtaata
    20281 tgatcgatgc ggacttgatg cgtcttgcgg cgttggagtg tgttcatatg gtttgaatct
    20341 gtttattgac cggtgaggac ggtttgcaat tcttccgagt aggggaaatt cgcctgcaat
    20401 tgtgcttcat attcgtatgc cgcctgtgcg ttgccgaggg ctttggcaat tttccagcct
    20461 agcagcaaat catcggcctg aaggacttct accctgcttt ggtatttttt aaagtagtaa
    20521 tcggcatcgc ccaactgccc ggccagcatt ttggtgcgcg ccagttcttt aaatgcgggt
    20581 gggaactgcg gctgggcggc gagggaacgt ttcaaatagg cttccgccaa tccgaattgc
    20641 ccctgttttg cgctgcatat gcctttattc aggttggcaa tataaggggt cgggtaggtg
    20701 gggtcggcca gggctttgtc gaaatatgcc atagattcgg cagggcggtt gagcctgccg
    20761 cacaggaacc agccgtagtt gttgttgatt tcggcactgt cgggtttgat ggagagggct
    20821 tgccggaaac tttcctgcgc cttgtcgtta actttcaggt attgatagat ttcggcacgg
    20881 accagccagg caagctcgtt tttagggtct gatttcaagg cgtcttcaat acttgccgtc
    20941 gcctgacggt agtcctgacc gcgcatatat tccattgcca actgggtttt gatattggaa
    21001 acctgattgg ctttttctgc ccgcgagggg cggtaggaag tgctgcacgc gcccaaggca
    21061 aggacaagta ataaagagat tcgtttggat ggcttaaaag gcataattac ccctgttgtc
    21121 cgattaaaat ctgctgccat ttttgttggc ggcgcgtttt atcctgaacc tgccccgcca
    21181 actgtccgca ggcggcatcg atgtcgtcgc cgcgcgtttt tcgtacggta acgacaaatc
    21241 ctgcctgctg caaaatatcg cggaacacac ggatgttctc attgctggag cgttcgtatc
    21301 cggagtttgg gaagggattg aacggaatca gattgaactt gcagggaaca tctgtgacca
    21361 gttcgatcag ttcgcgcgca tgttgcgcct tatcgtttat tccgtccaac atgacgtatt
    21421 cgaaagtgat gaaatccctg ggtgctttga ccagatagcg ttggcatgcg gccatcaatt
    21481 ctttcaaggg atattttttg ttcaacggta cgatttggtt gcggacttcg tcattggaag
    21541 cgtggaggga aaccgccaaa gccaccggca tgacatcgcg caacctgtcc atttggggaa
    21601 ccatacccga agtggaaacg gttacgcggc ggcggctcaa accgtagccg tggtcgtcca
    21661 gcatgatgct taaggcggta acgacattgt cgaagttcgc catcggctcg cccatgccca
    21721 tcatgacgac gttggaaata acgcgctcgt ttttcggtgt aacgcccatc gctttgtttg
    21781 cccaccacaa ttgcccgatg atttcggcag cagtcaaatt gcggttgaag ccctgccgac
    21841 cggtcgaaca aaatgtacat tccaaagcgc agccgacttg tgaggaaatg cagagcgtgc
    21901 cgcgatccga ttcggggatg aagacggttt ccaccccgtt gcccgtaccg acatccaaaa
    21961 gccattttcg agtgccgtct gaagattttt gagacatcat cagcttggga atttcgatgc
    22021 ctgcctgttc gttcagttta tggcgcaacg attttgccaa atcggtcatt tcgtcaaaat
    22081 tttgcgcgcc ggattggtgc atccaacgca taacctgttt ggcacggaaa ggtttttcgc
    22141 ccatatcggc aaaatgtcgg gtcagccctt ggaggtcgta gttgagcaga ttggttttca
    22201 tgtatttgtg tttttcttaa attaaggctt caaataaaaa attgcagggc aggcaagttt
    22261 gatttgaagc cttttgcaac agagttttca gacggcatgg atatatttta tgccgtctga
    22321 agaggagttg tgcggtgtat tgtatcaacg ggggcagatt tcggtttggc tgaaaaagta
    22381 ggcaatttcc aaagcggcat tttccggagt gtccgagccg tgtacggcat tgatgctgac
    22441 cgaagtggca aagtccgcgc gtatcgtgcc ttcggcggct tcggaaggat tagttgcacc
    22501 catcagttcg cggtttttca gaacggcgtt ttcaccctct aatacctgaa tcataaccgg
    22561 accgccggtc ataaattcaa ccaatccggc gtagaagggg cggtctttat gaaccgcata
    22621 aaattcttgc gcctctttga gggtaagctg cttcattttg gcggcaacga ttttcagacc
    22681 gttctcctca aagcggctgt atattttgcc gataacgttt ttgccgacgg catcgggttt
    22741 gatgatggag atggtacgtt caatcgccat gctatatcct tatttttact taagaagaat
    22801 caaatcggta ttctatcaaa aaaataactt atccgcctga agccttggga gatagggtca
    22861 ggtgcggctg ttccaaataa acttcggact gcatttcgac catccggctg gcggtgcggg
    22921 taaattcttc ggcaaaatcg ccttctgtat agatatggtt gacatctacc gcgccggtgg
    22981 cacacagttt gacacggaaa tcgtagagta cgtcaatcag ccaagtcagc cgccgtgcct
    23041 ccgccttttc ttgcggtgag agttgttcca aacctgaaat aaaaaccatt tcataatgtt
    23101 cggccaaata caggtagtcg gactgtgagc gggggccgaa gcacagtgcg cggaaatcaa
    23161 accatatggc acggccggac tcggctttgt ggggaatctc ccgaccgtgg atggtgctga
    23221 tgccggggtt caaatcggta atgcctgtca tttctttgaa cagttttgcc agttttgcct
    23281 cattttcttc attggcaggc gtaaagaaaa tctcggcggg gcggagggta cgcagtcggt
    23341 agtcttcacc gccgtcaaca tttaagacgg tcaggctgga ctcgatgagc gcgattgtgg
    23401 gaagaaaact gctccggttt tgaccttgcg ggtagagttc ggaaggcgcg tagtttgaag
    23461 tcgccaccaa aacaacgccc tcgttaagca ggttttccag cagacggcct aaaatcattg
    23521 catccgcaat atcgctgaca tgaaattcgt caaaacacaa tacgcgggtt tctttggcaa
    23581 tctcggcggc aacggatttc aacgggttgc tttcgctttt cagggttttc agccgccggt
    23641 ggatttctgc cataaaggca tgaaagtgga cgcggcgttt gcggcggtaa gggaggcagc
    23701 cgaaaaaagc gtccatcaga aagcttttgc cgcgtccgac cccgccatag aaataaagcc
    23761 ctttggggac ttgcggggaa cgcaaactcc tgcctaaaaa acggtttctt ttgcgtttga
    23821 acatcatcaa ttcggtccaa agccgatcga ggtgttcgat ggcggcagcc tgcgcgtcgt
    23881 cgcggatgaa gttgggcagt tgtgaggcag cctgatacca ggtcagcggg ctgtggtttt
    23941 caaacggcgg ggctttaaaa agttggtctc tactactcat atttaacctt tttatacttc
    24001 ttgcggctaa gaaagaaaat gcttactgtc ggtattataa atgatttcct tcaaacttgg
    24061 cattttccgt ggaaaagaat aatgacgcgc acaagggggt atgagcaaag gcggcgtttc
    24121 aatatggtgc agatatgagc tcaaatgcct tttatagt
//
LOCUS       DAWITQ010000013        22371 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.013, whole genome shotgun sequence.
ACCESSION   DAWITQ010000013 DAWITQ010000000
VERSION     DAWITQ010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22371)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22371)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22371
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.013"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(120..1034)
                     /locus_tag="WIX18_000463"
     CDS             complement(120..1034)
                     /locus_tag="WIX18_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEZ5237619.1"
                     /translation="MDAVQLKSFVAVAHEGNLTQAAKRLFLSQPAVSAQIKALEEYVG
                     TPLFRRTGKGMVLTRAGEILLPEAESLLQYKHKLEHFAKTLAGDYSEETSLGIIHPID
                     SAKLVALTDNIGQTAPKTRLHIQYGMSGEILSRIQHKTLHGGFILGNAAQRGIRSVFL
                     QNLTYALICPQSQYPHLTRSLPQSLQECVWIEMSGVSGSRKHLHQFWRSNRLSPKKQI
                     LCDYPQTIIDLVAGGIGVAMVPGNKAEAAAKEGAGVAIIESCRHSMPLNFIYAEEYED
                     NPHVSLLLECIEKVWGVQAVQPPVVSDN"
     gene            1302..2771
                     /locus_tag="WIX18_000464"
     CDS             1302..2771
                     /locus_tag="WIX18_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3360 family protein"
                     /protein_id="HEZ5237620.1"
                     /translation="MDKHNGTYRDLHRPASEFATRDEYLEHELQIMQPKRWRPNLPFR
                     DYRFEWEDLIPAMAGTIGKVVMVGAVAAAFAAPLGLPDSFVLENVRYELLIAAAFILL
                     VSGFFLPGANLPGTHGPLIPMIPIVVSAGGHPLAFGISIAVLGLLMALFRGGSIMAKL
                     TSNGVCGGLLLYLGFIGTTGQVKKLFSWAGGFNMPYIAFTVIIVTIVMYALLEHWKKR
                     WLAVPLGCLIAGVVAFALGAPFEFHTAPGLPPMSPAYWWGENSGWHLGLPTAESFLVV
                     FPFAVLAVAMWSPDFLGHQVFQKISYPEKTDKVLMNIDDTMTSCSVRQAVGSILGGAN
                     FTSSWGTYIVPASIAKRPIPGGAVLTAVLCIIAGLWGYPMDLAIWQPVLSVALVVGVY
                     LPLLEAGMEMTRKGKTTQSAAIVVFSSALVNPVFGWALTMLLDNLGLIGCKERSAQLG
                     FAGRVLIPAVGFLILCVAMGAVGMLPGIPPFLEHFKSLG"
     gene            3023..3394
                     /locus_tag="WIX18_000465"
     CDS             3023..3394
                     /locus_tag="WIX18_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237621.1"
                     /translation="MNKTLSILPVAILLGGCAAGGGNTFGSLDGGTGMGGSIVKMAVG
                     SQCRAELDKRSEWRLTALAMSAEKQAEWENKICACVAQEAPERMTGNDVMQMLAPSTR
                     NQALAALTAKTVSACFKHLYR"
     gene            3467..4876
                     /locus_tag="WIX18_000466"
     CDS             3467..4876
                     /locus_tag="WIX18_000466"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEZ5237622.1"
                     /translation="MKYISTRGETAHKPFSEVLLMGLAPDGGLMLPEHYPQIGRETLD
                     KWRGSAYPELAFEIMRLFVTDIPEDDLRDILNRTYTEAAFGTKEITPVRTLSDGIKIQ
                     ALSNGPTLAFKDMAMQFLGNAFEYVLNKEGKKLNILGATSGDTGSAAEYALRGKKGVN
                     VFMLSPDGKMSAFQRAQMYSLQDGNIHNIAVKGMFDDCQDIVKAVQNDAAFKEKYHIG
                     TVNSINWGRIVAQVVYYFAGYFKATQSNDEQVSFCVPSGNFGNVCAGHIAKQMGLPIR
                     RLIVATNENDVLDEFFKTGAYRPRNSAHTYVTSSPSMDISKASNFERFVFDLMDRDPQ
                     EINTLWAEVAAGKGFDLRFALEKVGGKYGFTSGKSTHPDRLATIRQVYEQDQELIDPH
                     TADGVKVAREVREEGETVVCLETALAAKFDATIREAVGDAAIPRPAALEGLETLPQRV
                     QTVPNSADAVKGIIEQTLA"
     gene            4923..5717
                     /locus_tag="WIX18_000467"
     CDS             4923..5717
                     /locus_tag="WIX18_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237623.1"
                     /translation="MTLPMQETHFSILLDELAAKQEAAIAPHLLADGTKVWIRKAGRH
                     NARWRYALLGMVARYLKLGVLKPVPSLGGEPAIATESKRLYELRAAGIAVPELLAVRK
                     NALMFGNLEGIPLDTQIRQEAEAGKADAWLAGLEAIARVHKKQQFLSQAFARNMMSDE
                     ENISFLDFEDDPSEVLTIAQCQARDWLCYIHSTALILKNGGLLEAAAEKWGGVLSDQP
                     AEIQRLIAATVKPILPIRRLEHPRWGRDALRLAASISLISLADIPP"
     gene            5905..6681
                     /locus_tag="WIX18_000468"
     CDS             5905..6681
                     /locus_tag="WIX18_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HEZ5237624.1"
                     /translation="MAAFNTQKVLSVHHWTDAYFTFTCTRDESLRFENGQFVMVGLMV
                     DGKPLMRAYSVASANWEEHLEFFSIKVQDGPLTSRLQHLKVGDDVLISKKPTGTLVAG
                     DLNPGKHLYLLSTGTGIAPFLSITKDPEIYEQFEKIILVHGVRYKKDLAYYDRFTKEL
                     PEHEYLGDLVKEKLIYYPIVSREEFEHHGRLTDLMVSGKLFEDIGLPKINPQDDRAML
                     CGSPAMLKDTCKVLDDFGLTVSPKTGVRGDYLIERAFVDQ"
     gene            complement(7440..9911)
                     /locus_tag="WIX18_000469"
     CDS             complement(7440..9911)
                     /locus_tag="WIX18_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEZ5237625.1"
                     /translation="MKKTCFHCGLDVPEHLHLTVRYENEDRETCCAGCQAVAQSIIDA
                     GLGSYYKQRTADAQKTELPPQEILDQIRLYDLPEVQSDFVETHGGTREAVLMLGGITC
                     AACVWLIEQQLLRTDGIVRIDLNYSTHRCRVVWDDGKIRLSDILLKIRQIGYTAAPYD
                     AQKIEAANQKERKQYIVRLAVAGLGMMQTMMFALPTYLYGGDIEPDFLQILHWGGFLM
                     VLPVVFYCAVPFYQGALRDLKNRRAGMDTPIAVAIIMTFIAGVYSLATNAGQGMYFES
                     IAMLLFFLLGGRFMEHIARRKAGDAAERLVKLIPAFCHHMPDYPDTQETCEAAVVKLK
                     AGDIVLVKPGETIPVEGTVLEGSSAVNESMLTGESLPVAKMPSEKVTAGTLNTQSPLI
                     IRTDRTGGGTRLSHIVRLLDRALAQKPRTAELAEQYASSFIFGELLLAVPVFIGWTLY
                     ADAHTALWITVALLVITCPCALSLATPTALAASTGTLAREGILIGGKQAIETLAQTTD
                     IIFDKTGTLTQGKPAVRRISLLRGTDEAFVLAVAQALEQQSEHPLARAILNCRISDGS
                     VPDIAIKQRLNRIGEGVGAQLTVNGETQVWALGRASYVAEISGKEPQTEGGGSAVYLG
                     SQSGFQAVFYLTDPLKDSAAEAVRQLAGKNLTLHILSGDRETAVAETARALGITHYRA
                     QAMPEDKLEYVKALQKEGKKVLMIGDGINDAPVLAQADVSAAAAGGTDIARDGADIVL
                     LNEDLRTVAHLLDQARRTRQIIRQNLIWAGAYNIIAVPLAVLGYVQPWIAALGMSFSS
                     LAVLGNALRLHKRGKMPSEKMPSEQ"
     gene            complement(9908..11086)
                     /gene="hflX"
                     /locus_tag="WIX18_000470"
     CDS             complement(9908..11086)
                     /gene="hflX"
                     /locus_tag="WIX18_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009347253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEZ5237626.1"
                     /translation="MTGRTGRNGSTQAQPERVMLVGVMLDKDGTGSSATRLNGFQTAL
                     AEAVELVKAAGGDSVRVETAKRDRPHTALFVGTGKAAELSEAVAADGIDLVVFNHELT
                     PTQERNLEKELKCRVLDRVGLILAIFARRARTQEGRLQVELAQLSHLAGRLIRGYGHL
                     QSQRGGIGMKGPGETKLETDRRLIAHRINALKKQLVNLKKQRALRRKPRESGTIKTFA
                     LVGYTNVGKSSLFNRLTKSGIYAKDQLFATLDTTARRLYISPECSIILTDTVGFVSDL
                     PHKLISAFSATLEETAQADVLLHVVDAAAPNSGQQIEDVENVLREIHAGDIPCIKVYN
                     KTDLLPSEEQNTGIWRDAAGKIAAVRISVAENTGIDALREAIAESCAAAPNTDETEMP
                     "
     gene            complement(11091..12371)
                     /locus_tag="WIX18_000471"
     CDS             complement(11091..12371)
                     /locus_tag="WIX18_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEZ5237627.1"
                     /translation="MKSLFIRLLLLGSAAGVFYHTQNQSLPAGELVYPSAPQIRDGGD
                     ALHYLNRIRAQIGLHKLAHAPVLENSARRHARYLTLNPEDGHGEHHPDNPHYTAQKLT
                     ERTRLAGYLYNGVHENISTEEEAAESSDSDIRTQQRQVDGLMSAIYHRLSLLDRHTDE
                     AGAAFVRENGKTVLVFNQGNGRFERHCAQGRNQPEAGRKYYRNACHNGAVVYTDEAMP
                     AQELLYTAYPVGNGALPYFHGERPDPVPEYEITGNPASIDFSEAAGKITMKSFKLYQG
                     KNEIRPVRVLTAGNDPNGRLTAYQFALFPLKPLEYGTLYTAVFDYVRNGRRAQAKWQF
                     RTRKPDYPYFEVNGGETLAVRKGEKYFIHWRGRWCLEACTRYTYRQRPGSRLSIGRHE
                     AGGIVFSVDGMAGSRITLAPEGETERGVTLYLQD"
     gene            complement(12524..13249)
                     /locus_tag="WIX18_000472"
     CDS             complement(12524..13249)
                     /locus_tag="WIX18_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HEZ5237628.1"
                     /translation="METQNKPTVTDIDRPILVPPGGHKKVLLHSCCAPCSGEVMEAML
                     ASGIDYTIYFYNPNIHPHKEYMLRKEENVRFAEKFGIPFIDKDDDYENDRKEWFAKAK
                     GMEFEPERGIRCTMCFDMRFEKAAQYAHEHGFPVFTSSLGISRWKNMAQINDCGHRAA
                     APYDDVVYWDFNWRKGGGSARMIEISKRENFYQQEYCGCAYSLRDSNAHRKSQGRIPI
                     KLGVLYYGDESTQYEPAPIRVDK"
     gene            complement(13322..13999)
                     /gene="radC"
                     /locus_tag="WIX18_000473"
     CDS             complement(13322..13999)
                     /gene="radC"
                     /locus_tag="WIX18_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HEZ5237629.1"
                     /translation="MSIKQWPEGERPREKLLERGAAALSDAELLAILLRVGTRGMSAV
                     DLARYLLQEFGSLGRLMSAEVGKLSAYKGMGTASFTQFAVVREIGRRILAEELQESIV
                     LSDPDTVADYLRFHLGQEKVEVSVALLLNRQNQLIAVRELSRGTVAENTIYIREIVKL
                     ALDEYADSLIIAHNHPGGSPEPSQEDIMFTRRLAQAMSLVDVSLLDHFIVTAQTVRSF
                     RQLGLMP"
     gene            complement(14122..15471)
                     /gene="gshA"
                     /locus_tag="WIX18_000474"
     CDS             complement(14122..15471)
                     /gene="gshA"
                     /locus_tag="WIX18_000474"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HEZ5237630.1"
                     /translation="MKLPVMSPEHSAQLQAFEAKILSNHAKIEAWFRTQWSVHRPPFY
                     GSVDIRNAGYKISSIDMNLFPGGFNNLNPNFIPLAAVAAQDAVQRACETAKSVLIIPE
                     NHTRNTFYLQNVYALGEILRSAGYEVRLGSLNPEVTEPTEFETALGDKILLEPLLRTR
                     DRVHLADGFSPCVVLLNNDLSAGIPDILKGISQTVLPPLHGGWTTRRKTNHFGAYNQV
                     AAEFAKLIGIDEWQINPYFEKIGGLDFQGREGEDALAEAVERVLAKIQAKYDESGITD
                     KPFVIVKADAGTYGMGVMSVKSADEVRGLNRKNRNKMAKVKEGLEVSEVIVQEGIYTY
                     ETLNGAVCEPVVYMMDRFVIGGFFRVHEGRGADENLNAGGMVFVPLSNSIPTGNGDNS
                     QEAPEACKRVFEQWDSLGMPRSEKDCDVDNEHNRLYVYGVMARLSLLAASIELEETA"
     gene            15731..17140
                     /gene="leuC"
                     /locus_tag="WIX18_000475"
     CDS             15731..17140
                     /gene="leuC"
                     /locus_tag="WIX18_000475"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HEZ5237631.1"
                     /translation="MTAQTLYDKLWNSHVVREEEDGTVLLYIDRHLVHEVTSPQAFEG
                     LKMAGRKLWRIDSVVSTADHNTPTGDWDKGIQDPISKLQVDTLDKNIKEFGALAYFPF
                     MDKGQGIVHVMGPEQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHTMATQCI
                     TAKKSKSMLIAVDGKLKAGVTAKDVALYIIGQIGTAGGTGYAVEFGGEAIRSLSMEGR
                     MTLCNMAIEAGARSGMVAVDQTTIDYVKDKPFAPEGEAWDKAVEYWRTLVSDEGAVFD
                     KEYRFNAEDIEPQVTWGTSPEMVLDISSKVPNPAEETDPVKRSGMERALEYMGLKAGT
                     PLNEIPVDIVFIGSCTNSRIEDLREAAAIAKDRKKAANVQRVLIVPGSGLVKEQAEKE
                     GLDKIFIEAGFEWREPGCSMCLAMNADRLAPGQRCASTSNRNFEGRQGNGGRTHLVSP
                     AMAAAAAVTGRFTDIRMMA"
     gene            17237..17491
                     /locus_tag="WIX18_000476"
     CDS             17237..17491
                     /locus_tag="WIX18_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237632.1"
                     /translation="MNKLFITALSALALSACAGTWEGAKQDTARNLDKTQAAAERAAE
                     QTGNAVEKGWDKTKEAVKKGGNAVGRGISHLGGKIENATE"
     gene            17553..18194
                     /gene="leuD"
                     /locus_tag="WIX18_000477"
     CDS             17553..18194
                     /gene="leuD"
                     /locus_tag="WIX18_000477"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HEZ5237633.1"
                     /translation="MKAFTKITAIVAPLDRSNVDTDAIIPKQFLKSIKRSGFGPNAFD
                     EWRYLDHGEPGMDNSKRPLNPDFSLNQPRYQGAQILLTRKNFGCGSSREHAPWALDDY
                     GFRAVIAPSFADIFFNNCYKNGLLPIVLTEEQVDRLFKEVEANEGYRLSIDLAGQTLT
                     TPGGETLAFDITEHRKHCLLNGLDEIGLTLQHADEIHAFEEKRRQSQPWLFNG"
     gene            18363..19634
                     /locus_tag="WIX18_000478"
     CDS             18363..19634
                     /locus_tag="WIX18_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HEZ5237634.1"
                     /translation="MQQIKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAAL
                     EVLKQNYPDEVPYGDITKIETGDIPDFDILLAGFPCQAFSFAGKRLGFEDTRGTLFFD
                     VARILKAKKPKGFILENVEGLVTHDRKDPTQKIGRTLTVILETLETLGYYVSWKVLNA
                     KDFGIPQNRKRIYLTGSLKSKPDLSFETTLSPKLKNILESGLPTESSPFIKKLLKKFP
                     PSELYGKSVKDKRGGKNNIHSWDIELKGTVTEEEKQLLNMLLKERRKKKWASEIGIDW
                     MDGMPLTKAQISTFYKHPNLQNILDSLTDKGYLVLEHPKQKIGGRRIKDESLPKGYNI
                     VSGKKSFEINKILDPNDVAPTLVAMDMEHLFVVDNGGLRTLTGKEGLRLFGYPDDYSF
                     DIPKKDKYDLLGNTVAVPVIKAVSERLLHTL"
     gene            19650..20381
                     /locus_tag="WIX18_000479"
     CDS             19650..20381
                     /locus_tag="WIX18_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NgoBV family restriction endonuclease"
                     /protein_id="HEZ5237635.1"
                     /translation="MVKLTAQQIFDKLLNEEKILSVNGQIRFFLGDVDIIVKQKDVVG
                     NIIQEWLGGWLRKREIEFDVSTNTQMPPDFFLNKKDRSRELLEVKAFNRNASPGFDIA
                     DFKMYSDEIIHKPYMLDVDYLIFGYDMDDNGNVTIKDLWLKKVWQITRSMDGWAINLQ
                     VKKGVVHKIRPGVWYSINKKNMPMFECLEDFVSAIEETVYQNPATRHNASLWKKKFEE
                     AYKKHYNRSISIPRWHEIAHKYKKK"
     gene            20415..21485
                     /gene="leuB"
                     /locus_tag="WIX18_000480"
     CDS             20415..21485
                     /gene="leuB"
                     /locus_tag="WIX18_000480"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HEZ5237636.1"
                     /translation="MTKHIAILRGDGIGPEIVAETVRVLDKLIAQGLDAGYEYAPLGG
                     EAYDEYGHPYPEFTQNLCRKADAVLLGAVGSPQYDNLDRPLRPERGLLAIRKDLNLFA
                     NLRPAVLYPELANASTLKPEIVAGLDILIVRELTGDIYFGEPRGIRVLENGEREGYNT
                     MKYSESEIRRIAHVAFQSAQKRSKKVCSVGKANVLETTELWREIFEEIGKEYPDVELS
                     HMYVDNAAMQLVRAPKQFDVIATGNIFGDILSDEASMLTGSIGMLPSASLDENGKGLY
                     EPSHGSAPDIAGQNKANPLATILSLAMLLRYSLNDEARAQQVENAVQKVLQQGLRTSD
                     IYEEGTKLVSCSEMGDAVLAAL"
     gene            21648..22211
                     /locus_tag="WIX18_000481"
     CDS             21648..22211
                     /locus_tag="WIX18_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HEZ5237637.1"
                     /translation="MKKIIFAALAAAAISTASAATYKVDEYHANARFAIDHFNTSTNV
                     GGFYGLTGSVEFDQAKRDGKIDITIPIANLQSGSQHFTDHLKSADIFDAAQYPDIRFV
                     STKFNFNGKKLVSVDGNLTMHGKTAPVKLKAEKFNCYQSPMEKTEVCGGDFSTTIDRT
                     KWGMDYLVNVGMTKSVRIDIQIEAAKQ"
BASE COUNT         5367 a         5899 c         5821 g         5284 t
ORIGIN      
        1 ggcatttcca aagggcattt taagccgtat ttgagagaat gcggatggcg ttttcagtgt
       61 tttcagcgtg ataaaattca aatttctatt ttaaaacaat cagcaaagca ggatttattt
      121 cagttgtccg agacaacggg cggctgcacc gcctgcactc cccatacttt ttcaatgcac
      181 tcgagcagga gtgagacgtg gggattatcc tcgtattctt ccgcataaat gaaattgagc
      241 ggcatactgt ggcggcacga ttcgataata gccacgcccg cgccttcttt tgccgccgct
      301 tcggctttgt ttcccggcac cattgccaca cctataccgc ctgcaaccaa atcgataatg
      361 gtttgggggt agtcgcacaa gatctgtttt ttgggtgaga gccggttgct gcgccaaaac
      421 tggtgcaggt gcttcctact tccggacacg cccgacattt ctatccatac gcattcttgc
      481 aggctctgcg gaagggagcg ggtcagatgg ggatattggc tttgcgggca aatcagcgcg
      541 taggtcaggt tttgcaggaa tacgctgcgg atgccgcgtt gggcggcgtt gccgagtata
      601 aagccgccgt gcagggtttt gtgttggatg cgcgagagga tttcgccgct cattccgtat
      661 tggatgtgca ggcgcgtttt gggggctgtt tgaccgatat tgtccgtcag cgcgacgagt
      721 tttgccgaat cgatggggtg gataatgccc aaactggtct cttccgaata atcgcctgcc
      781 agcgttttgg caaaatgctc cagcttgtgt ttgtattgca gcagggattc cgcttcgggc
      841 aacagtattt cgcccgcccg cgtcaatacc atgcctttcc ccgtgcgcct gaacagcggc
      901 gtgccgacat attcttcaag ggctttaatt tgggcggaaa cggcaggctg ggaaaggaaa
      961 agtcgtttgg cggcttgggt aaggttgccc tcgtgcgcga cggcgacaaa tgattttaat
     1021 tgtacggcat ccatatatcc ctccttgtgc ggatgttttc tatatttgtg caatcgaaat
     1081 cttttaggtg gattgttgct gaaaattaac tttttaatca agtggtttgt aaattgtatc
     1141 agtttttcgg atgatgatta ttaaaaaaaa agattggttt tattgcctgt ttgggcttta
     1201 aatggggtga cggcttcctt tcggtggccc gaacgcagcc catatcaaaa agaaaagtca
     1261 tgcgcccctt ttgcgaggcg cgatatataa ggaggaagat tatggacaaa cataatggga
     1321 cttatcggga tttgcaccgt ccggcttcgg aatttgcgac gcgggacgaa tatttggaac
     1381 atgaattgca gattatgcaa ccaaaacgct ggcggcccaa cctgcccttt cgcgattacc
     1441 gcttcgagtg ggaggatttg attcctgcga tggcgggaac gattggaaaa gtggtgatgg
     1501 tgggggcggt ggcggcggcg tttgccgcac ctttggggct gcctgacagc tttgtactgg
     1561 aaaatgtgcg ctatgagctt ttaatcgccg ccgcgtttat cttattggta tcgggctttt
     1621 ttctgcccgg cgccaacctg cccggtacgc acgggccgct gattccgatg attcccatcg
     1681 ttgtgtcggc aggcgggcat cctttggcgt tcggcatttc gattgcggtt ttaggtctgc
     1741 tgatggcttt atttcgcggc ggcagtatta tggcgaagct gacaagcaac ggcgtatgcg
     1801 gcggattatt actctatttg ggctttatcg gcacgacggg gcaggtaaaa aaattgtttt
     1861 cgtgggcagg cggttttaat atgccctaca tcgcttttac cgtcattatt gtaacgattg
     1921 tgatgtacgc tttgttggag cattggaaaa aacgctggtt agccgtgcct ttgggatgct
     1981 tgattgccgg tgtggtggca tttgcattgg gtgcgccgtt tgagtttcac accgcccccg
     2041 gcctgcctcc aatgagtcct gcttattggt ggggtgaaaa cagcggctgg catctggggt
     2101 tgccgacggc agaaagtttt ttggttgtct ttccatttgc ggtattggct gttgcaatgt
     2161 ggtcgcccga ttttttagga catcaagtgt tccaaaaaat cagctatccg gaaaaaaccg
     2221 ataaggtatt gatgaatata gacgacacca tgacaagttg ttctgtccgt caagcagtgg
     2281 gttctatttt agggggtgca aattttacct cttcttgggg aacttatatc gtaccggcat
     2341 cgattgccaa acgccccatt ccgggcggtg cggttttaac ggcggtttta tgtattatcg
     2401 ccgggttatg gggctatccg atggacttgg cgatttggca gccggtattg agcgtagcct
     2461 tggtcgtagg cgtatactta ccgcttttgg aagcgggcat ggaaatgacg cgcaaaggca
     2521 aaaccaccca atccgccgcc atcgtggtgt tctcttccgc cttggtcaat ccggttttcg
     2581 gctgggcgtt gacgatgctg ttggataatt tgggcttaat cggctgcaaa gagcgcagtg
     2641 cgcaattagg tttcgccgga cgcgtgttga tacccgcagt aggtttcttg atcttgtgtg
     2701 tggcgatggg tgcggtcggg atgctgcccg gtatcccgcc gtttttggaa cacttcaaat
     2761 ctttgggcta ggctgaaatc ggaaatgccg tctgaaccgc tttcagacgg catttttgca
     2821 aacaggcaaa atgacggcgg cgggattttt tattttcccg attgaagtat aatgttgccg
     2881 ggcttcaacc ggatattcaa aacggtttgt tccaacactc ggaacggcgc ataaaacgcc
     2941 gcccttcgcg ttatcccgaa cggggcggct aatcagattc tatcgccata aaaggcgggg
     3001 tttcaaccga aaaggaattg agatgaataa aaccttgtct attttgccgg tggcaatctt
     3061 actcggcggc tgcgccgccg gaggcggtaa cacattcggc agcttagacg gtggcacagg
     3121 catgggcggc agcatcgtca aaatggcggt tgggagccaa tgccgtgcgg aattggacaa
     3181 acgcagcgaa tggcgtttga ccgcgctggc gatgagtgcc gaaaaacagg cggagtggga
     3241 aaacaagatt tgcgcttgcg tcgcccaaga agcacccgaa cggatgaccg gcaacgatgt
     3301 gatgcagatg ctggctccgt ccacgcgcaa tcaggcactt gccgccctga ccgccaaaac
     3361 ggtttccgcc tgcttcaaac acctgtaccg ctaaccttct tcagacggca tgaggcagat
     3421 gccgtctgaa gccgttttcc tgcaatttcg acagacgaga aaaatcatga aatacatcag
     3481 cacgcgcggc gaaaccgcac acaaaccgtt cagcgaagtt ttattgatgg ggcttgcccc
     3541 cgacggcggt ctgatgctgc cggaacatta tccgcaaatc gggcgcgaaa ccttggacaa
     3601 atggcgcggt tcggcttatc ccgaattggc gtttgaaatt atgcgcctgt tcgttacgga
     3661 tattccggag gacgatttgc gcgatattct gaaccgtact tacacggaag cggcgttcgg
     3721 tactaaggaa atcacccccg tccgcacgct ttcagacggc atcaaaatcc aagccttgtc
     3781 caacggcccg acgctggcgt tcaaagatat ggcgatgcag tttttgggca atgcgtttga
     3841 atatgtttta aacaaagaag gcaaaaaact caatatcttg ggcgcaacca gcggcgatac
     3901 gggttcggct gcggaatatg ccttgcgcgg caaaaaaggc gtgaacgtat ttatgttgtc
     3961 gcccgacggt aagatgagcg cgttccaacg cgcgcagatg tacagcctgc aagacgggaa
     4021 tatccacaat atcgccgtga agggtatgtt tgacgactgt caggatattg tgaaggcggt
     4081 gcagaacgat gccgcgttca aggaaaaata ccacatcggt acggtcaatt cgatcaactg
     4141 gggacgcatc gtcgcacaag tggtttatta ctttgcgggc tatttcaaag cgacacaaag
     4201 caatgacgag caagtcagct tctgcgtgcc gagcggcaac ttcggcaacg tttgcgcggg
     4261 acacatcgcc aaacagatgg gtttgcctat ccgccgcctg attgtcgcga ccaatgaaaa
     4321 cgatgtgttg gacgagtttt tcaaaaccgg tgcataccgc ccgcgcaaca gcgcgcatac
     4381 ttatgttacc tccagcccgt cgatggacat ttccaaagcg tccaacttcg agcgtttcgt
     4441 gttcgacctg atggatcgcg atcctcagga aatcaatacg ctgtgggcgg aagtagcggc
     4501 gggcaaaggc tttgacctgc ggtttgcttt agaaaaagtc ggtggcaaat acggttttac
     4561 ctccggcaaa tccacccacc ccgaccgcct cgccaccatc agacaggttt atgagcaaga
     4621 ccaagaactc atcgacccgc acactgccga cggcgtaaaa gtcgcccgcg aagtgcgcga
     4681 agaaggggaa acggttgtgt gtttggaaac cgcgttggca gcgaaattcg atgcgaccat
     4741 acgcgaagcc gtcggcgatg ccgccattcc gcgccccgcc gcgctggaag gtttggaaac
     4801 attgccgcag cgcgtgcaaa ccgtgccgaa cagtgcggat gcggtaaaag gcatcatcga
     4861 acaaaccctt gcctgatgtt ccgtatgggc ggcattccgt ccgaacttaa gattgaaaga
     4921 aaatgacctt acctatgcag gaaacccatt tttccatact gctggacgaa ctggcggcaa
     4981 aacaggaggc agccatcgcc ccccacctgc ttgccgacgg aaccaaggta tggatacgca
     5041 aagcaggcag gcacaatgcg cgatggcgtt acgcgctgct cggtatggtt gcccgatatt
     5101 tgaaactggg ggtgttgaag ccggttccca gcctcggcgg cgagcctgcc attgcaaccg
     5161 aatcaaaacg cctgtacgaa ttgcgcgcgg cggggatagc cgttcccgaa ttgctcgccg
     5221 tcaggaaaaa tgcccttatg ttcggaaatt tggaaggtat cccgctcgat acgcaaatcc
     5281 gccaagaagc cgaagccgga aaggcggacg cttggcttgc cggtttggaa gccattgcac
     5341 gcgtgcataa aaaacagcag ttcctcagtc aggcgtttgc gcggaatatg atgtcggacg
     5401 aggaaaacat cagctttttg gattttgaag acgacccttc cgaagtcctg accatagcgc
     5461 aatgccaagc ccgcgattgg ctctgctaca tccattcgac cgcgctgata ttgaaaaacg
     5521 gcggactgct ggaagcggct gcggaaaaat ggggcggcgt attgtcggat cagcctgccg
     5581 aaatacaaag gctgattgcc gccaccgtca aaccgatcct cccgatacgc aggctggaac
     5641 acccccgctg gggacgggac gcgctcaggc tggcagcctc gatttccctg atttcccttg
     5701 ccgatatacc gccataagcc gccgcctgcc ccgcgatgcc gtctgaagcc cttcagacgg
     5761 catataacca acgcgcatca agcattgtcg caaccatccg tttcgtttag aattttggct
     5821 ttaccccgaa tcgggcagac attttcactc tgccgcacat cccgaacaag cactatccat
     5881 ttcttttact gacaggaaac ccaaatggca gcattcaata cccaaaaagt attgtccgta
     5941 caccactgga cagacgcata ttttaccttt acctgcaccc gcgacgaatc gttgcgcttt
     6001 gaaaacggac agttcgttat ggtcggattg atggtggacg gcaagccgct gatgcgtgca
     6061 tacagcgtcg cctccgccaa ctgggaagaa cacctcgaat ttttcagcat taaagtccaa
     6121 gacggcccgc tgaccagccg cctgcaacac ctcaaagtcg gcgacgacgt gttaatcagc
     6181 aaaaaaccga ccggaactct ggttgccggc gacctgaatc caggcaaaca cctttacttg
     6241 ttgagcaccg gtaccggcat cgcccctttc ttgagcatca ccaaagaccc cgagatttac
     6301 gagcaatttg aaaaaatcat cctcgtacac ggcgtgcgct acaaaaaaga tttggcgtac
     6361 tacgaccgct ttaccaaaga attgcccgaa cacgaatacc tcggtgactt ggttaaagaa
     6421 aaactgattt actacccgat tgtttcccga gaagaattcg aacaccacgg ccgcctaacc
     6481 gacctgatgg tgagcggcaa actgtttgaa gacatcggcc tgcccaaaat caacccgcaa
     6541 gacgaccgcg cgatgctgtg cggcagcccc gcgatgctga aagacacctg caaagttttg
     6601 gacgatttcg gtctgaccgt ctccccgaaa acaggcgtgc gcggcgacta cctgattgag
     6661 cgtgcgtttg tagatcaata agctgtttga aaatcccgtc tgaacggcat cagcgataaa
     6721 aaaacccgaa tcctgccaat caggattcgg gtttttatag tgggtaaaaa ttagaaatgc
     6781 acatttccgt catttccgcg caggctagga tccaaactta tccgtttcat tatagtggat
     6841 taacaaaaac cagtacagcg gtgcctcgcc ttgccgtact atttgtactg tttacggctt
     6901 cgtcgccttg tcctgatttt tgttaatcca ctatagtatc tgaaaataaa agagaaacca
     6961 aacatataga ttcccgcttg cgcgggactg acgacggtgt tctgcgtagc caaagcagaa
     7021 aaacatcctt attgtcattt catcatgata taacaataag gatgttaaaa attagttatc
     7081 attatatgca tgatatataa gaaaaattgt cccaataaga aatgttatgc agaaaataaa
     7141 atgaaaagga tggttttcat tgaaaatggt tgttctgcca ccgtcataca cagaaccggt
     7201 atttggaaaa aaaataatcc atattgacat cattattcca tttatcgcat aaatccactt
     7261 tttaattttt ttcctcatta atataatctc ttatttaata aaatcaaata cctagcaatt
     7321 cgatctcaaa ttttaaacgc caacgtgttt gagcggtaac aatgcatact ttaagtttgt
     7381 aatccttcat cgtctcattt ttgttttaat cgactatacg tctaaagcaa cgccgtccgt
     7441 cattgttcgg acggcatttt ttcagacggc attttccccc gtttgtgaag gcgcaaggca
     7501 ttgcccaaaa ccgccagcga actgaaactc atacccagtg cggctatcca cggttggaca
     7561 tagcccaaaa cggcaagcgg tacggcaatg atattgtacg cgcccgccca tatcaggttt
     7621 tgccggataa tctgccgggt gcgccgcgcc tgatcgagca ggtgggcgac ggtacgcaaa
     7681 tcttcgttca ataacacaat gtccgcgccg tccctcgcaa tatccgtccc gcccgctgcg
     7741 gcggcggata cgtctgcctg cgccaaaacg ggcgcgtcgt tgatgccgtc gcctatcatc
     7801 agtacttttt tcccttcttt ttgcaaggct ttgacgtatt ccagtttgtc ctcgggcatg
     7861 gcttgggcgc ggtagtgcgt gatacccagg gcgcgggcgg tttcggcaac ggcggtttcg
     7921 cggtcgccgc tgaggatgtg cagggtcagg tttttgcctg ccaactgccg caccgcctcc
     7981 gccgcgctgt ctttcaaggg gtcggtcagg tagaacacgg cttggaaacc gctttgactg
     8041 ccgaggtaaa ccgcgctgcc gccgccttct gtttgcggtt ctttacctga aatttcggcg
     8101 acataggatg ccctgcccaa tgcccaaacc tgtgtttcgc cgttgacggt cagttgcgcg
     8161 cccacgcctt cgccgatgcg gttgaggcgt tgtttaatag cgatgtcggg gacgctgccg
     8221 tctgaaatgc ggcagttgag gatggcgcgg gcaaggggat gttcggactg ttgttctaaa
     8281 gcctgcgcca ccgcgagaac aaaggcttcg tctgtgcctc tcaacaatga gatacggcgg
     8341 acggcgggtt tgccttgggt cagcgtgccg gttttgtcga agatgatgtc ggtggtttgg
     8401 gcgagggttt cgattgcctg ctttccgccg attaaaatac cttcgcgcgc cagcgtaccg
     8461 gtagaagctg ccagcgcggt cggcgtggca agcgataagg cgcaggggca ggtaatgacc
     8521 agcagggcga cggtaatcca caatgcggtg tgcgcgtcgg cgtacagcgt ccagccgatg
     8581 aagacgggga cggcaagcag gagttcgccg aatatgaaag acgaggcgta ttgttccgcc
     8641 aactcggcag tgcgcggttt ttgcgctaag gcgcggtcga gcaggcggac gatgtgcgac
     8701 agtcgcgtgc cgccgccggt gcggtcggtg cgtataatca gggggctttg cgtgttgagt
     8761 gtgccggcgg ttactttttc agacggcatt ttggcgacgg gcaggctctc gccggtcagc
     8821 atagattcgt tgacggcact gcttccttcc agcaccgtgc cctcaacggg gatggtttcg
     8881 cccggtttga ccagcacgat atcgcccgcc ttcaatttga cgacagctgc ctcgcaggtt
     8941 tcctgcgtat cggggtaatc gggcatatga tggcaaaacg caggaatcag cttcaccagc
     9001 ctctcggcgg catcgcctgc cttacggcgg gcaatgtgtt ccataaagcg tccgcccagc
     9061 aggaaaaaca gcagcatcgc gatggattcg aaatacatcc cctgccccgc atttgtcgca
     9121 aggctgtaaa cgccggcgat aaaggtcatg atgatggcga cggcaatcgg cgtatccatg
     9181 ccggcgcggc ggtttttcag gtcgcgcaac gcgccttgat aaaacgggac ggcgcaatag
     9241 aatacgacgg gcagcaccat taaaaagccg ccccaatgga ggatttgcag gaaatcgggt
     9301 tcgatgtcgc cgccgtaaag gtaggtcggc agcgcgaaca tcatcgtctg catcatcccc
     9361 agcccggcaa cggcgaggcg gacgatgtat tgttttcgtt ctttttggtt ggcggcttcg
     9421 attttttgcg cgtcataggg tgcggcggtg tagcctatct gcctgatttt caacagaatg
     9481 tcggaaaggc ggattttgcc gtcgtcccag acgacgcggc agcggtgcgt gctgtaattg
     9541 aggtcgatgc ggacgatgcc gtctgtacgc aaaagctgct gttcgatcag ccagacgcag
     9601 gcggcgcagg tgatgccgcc gagcattaaa accgcctcgc gcgtgccgcc gtgggtttcc
     9661 acaaagtcgg actggacttc gggcaggtcg tacaggcgga tttggtcgag gatttcttgg
     9721 ggcggcagct cggttttttg cgcgtcggcg gtgcgttgtt tgtaataact gcccaagccc
     9781 gcgtcaataa tgctttgtgc gaccgcctga cagccggcgc agcaggtttc gcggtcttcg
     9841 ttttcgtaac ggacagtcag gtggaggtgt tcgggaacat ccagaccgca gtggaaacag
     9901 gtttttttca tggcatttcg gtttcgtctg tgtttggtgc ggcggcacaa gactcggcaa
     9961 tggcttcgcg cagtgcgtct ataccggtat tttcagcaac ggaaatgcgg acggcggcaa
    10021 tttttcccgc agcgtcgcgc catatgcccg tgttttgttc ttcagacggc agcaggtcgg
    10081 ttttgttgta caccttgatg cacggaatat cgccggcatg gatttcccgc agtacgtttt
    10141 ccacgtcttc aatctgctgt ccgctgttcg gggcggcggc atcgacgacg tgcagcagca
    10201 catcggcttg cgcggtttct tccagcgtgg cggaaaatgc cgaaatcagt ttgtgcggca
    10261 aatcactgac gaatccgacg gtatcggtca ggataatgct gcattcggga ctgatgtaca
    10321 gccgccgcgc cgtggtgtcg agtgtggcga aaagctggtc tttcgcatat atgcccgact
    10381 tggtcagccg gttgaacagg ctggatttgc cgacattggt atagccgacc agcgcaaacg
    10441 ttttgattgt gcccgattcg cggggcttgc ggcgcagggc gcgctgtttt ttgaggttga
    10501 caagctgttt tttcaaggca ttgatccgat gggcgatcaa tcggcggtcg gtttccagtt
    10561 tggtttcgcc ggggcctttc atgccgatac cgccgcgctg gctctgcaga tggccgtaac
    10621 cgcgtatcaa gcgtcccgcc aaatggctca attgcgccaa ctcgacttgc agcctgcctt
    10681 cctgcgtgcg ggcgcggcgg gcgaaaatcg ccagaatcag ccctaccctg tccaatacgc
    10741 ggcatttcag ttctttttca aggttgcgtt cctgcgtggg cgtgagttcg tggttgaata
    10801 cgaccaaatc gatgccgtct gcggcaactg cttctgacag ctccgccgcc ttgcccgtgc
    10861 cgacaaacag cgcggtgtgc ggacggtcgc gtttggcagt ctccacgcgc acggaatcgc
    10921 cgcccgccgc tttgaccagc tcgacagctt ccgccaatgc cgtctgaaaa ccgttcagac
    10981 gggtggcact gctgcccgtg ccatctttgt ccaacattac gcccaccagc atgacgcgtt
    11041 cgggttgcgc ttgggtactg ccgttgcggc ctgttctgcc tgtcatgtat tcaatcctgt
    11101 aaataaaggg ttacgcctcg ttccgtttct ccttccggtg caagcgtgat gcggctgccc
    11161 gccattccgt caacgctgaa gacgatgccg cccgcctcgt gccttcctat ggacaggcgg
    11221 ctgccgggtc gctgccggta ggtataacgg gtacacgctt ccaaacacca gcgtccgcgc
    11281 cagtggatga aatatttttc gccttttcta accgcaagtg tctcgccgcc gtttacctca
    11341 aaataagggt aatcgggttt tcgggttcta aactgccatt tcgcctgcgc gcgccgtccg
    11401 ttgcggacat agtcgaatac cgccgtataa agcgtaccgt attccaaagg cttgagcggg
    11461 aaaagcgcga attggtacgc ggtcagcctg ccgttggggt cgttgccggc ggttaaaacc
    11521 ctgacggggc ggatttcgtt tttaccctga tacagcttga aacttttcat cgtaattttg
    11581 cctgccgcct cggaaaaatc aatgctggca ggattgcccg tgatttcata ttccggcacg
    11641 gggtctggac gctcgccgtg gaaataaggc agtgcgccgt tgccgacggg ataggctgta
    11701 tagagcagct cctgtgcggg catggcttcg tcggtgtaca cgaccgcacc gttatggcag
    11761 gcgttgcggt aatatttccg tcctgcttcc ggctgatttc tgccttgggc gcaatgccgc
    11821 tcaaacctgc cgttgccctg attgaatacg agaacggttt taccgttttc gcgcacaaat
    11881 gccgctcctg cctcatccgt atggcggtca agtagggaaa ggcggtggta gattgcgctc
    11941 attaatccgt ccacttggcg ttgctgcgtg cggatgtcgc tgtcggacga ttcggcggct
    12001 tcctcttccg tgctgatgtt ttcatgcacg ccgttgtaga gatacccggc aaggcgtgtg
    12061 cgttcggtca gcttttgtgc ggtgtagtgc ggattgtcgg gatggtgttc gccgtgtccg
    12121 tcttcgggat tgagcgtgag atagcgtgcg tgcctgcggg cggaattttc caaaaccggc
    12181 gcgtgtgcca gcttgtgcaa accgatttgg gcgcggatgc ggttgaggta gtgcagcgca
    12241 tcgccgccgt ccctgatttg cggtgcggac ggatagacaa gttcgcccgc gggcagggat
    12301 tggttttggg tatgatagaa aacgccggcc gccgaaccca acaggagcag ccgaataaaa
    12361 agggatttca taatgccgtc ctcccgacgc ggcaacgggg tgttttatca aaacggcaaa
    12421 cttgccaatg cggtttccga ttgcagattg ccaaaccggc aaacctttcc ccgtgccgat
    12481 gccgaacccg atgccgtctg aaccttcaga cggcatcggg tgtttatttg tccacccgga
    12541 tgggtgcagg ttcgtattgt gtcgattcgt cgccgtaata cagcacgccg agtttgatgg
    12601 ggattctgcc ctgtgatttg cggtgggcat tggaatccct cagggaatag gcacaaccgc
    12661 aatattcctg ctggtagaag ttttcacgtt tgctgatttc aatcatgcgc gcgctgccgc
    12721 cgcctttgcg ccagttgaaa tcccaataca ccacatcatc gtaaggcgcg gcggcgcggt
    12781 gtccgcagtc gttgatttgc gccatatttt tccagcgtga aatgcccagc gaactggtaa
    12841 agacggggaa cccgtgttca tgcgcgtatt gcgccgcctt ttcaaaacgc atatcgaaac
    12901 acatggtgca gcggatgccg cgttccggct caaactccat gcctttggct ttggcaaacc
    12961 attctttgcg gtcgttttcg tagtcgtcgt ctttatcgat gaaaggaatg ccgaactttt
    13021 ccgcaaagcg cacgttttcc tcttttcgga gcatatactc tttgtgcgga tggatattgg
    13081 gattgtaaaa ataaatggtg tagtcgatgc cggaggcaag catcgcctcc atcacttcgc
    13141 cgctgcacgg ggcgcaacag gaatgcagca agactttttt atgtccgccg ggcgggacga
    13201 gtatggggcg gtcaatgtcg gtaacggtag gtttgttttg tgtttccatt aacttaacga
    13261 tatctgtcga atacggttga agcggctatt ttatcagagc cgccgcatgt aaaacagggt
    13321 gtcagggcat cagcccgagc tgcctgaacg aacggacggt ttgcgccgtt acgataaaat
    13381 ggtcgagcag cgacacatcg accagcgaca ttgcctgtgc cagccgcctt gtgaacatga
    13441 tgtcttcctg cgaaggttcg ggcgagccgc ccggatggtt gtgcgcgata atcaggctgt
    13501 cggcatattc gtccaatgcc agtttgacaa tttcacggat gtaaatcgtg ttttccgcaa
    13561 ccgtaccgcg cgacagctct ctgaccgcaa tcagttggtt ttggcggttc aacagcagcg
    13621 cgacgctgac ttcgactttt tcctgcccca aatgaaagcg taaataatcg gcaacggtat
    13681 ccggatcgga caggacgatg ctctcctgca attcttccgc caatatccgc cgcccgattt
    13741 ccctgaccac ggcgaactgt gtgaaacttg ccgtccccat ccctttgtat gccgacagtt
    13801 tgccgacctc cgcgctcatc agcctcccca aactgccgaa ctcctgcagc aaataacgcg
    13861 ccaaatcgac cgcactcatt ccgcgcgtgc cgacgcgcag caggattgcc aaaagttcgg
    13921 catcactcaa agccgccgcc ccgcgttcca acagcttttc cctgggcctt tccccctccg
    13981 gccattgctt gatgctcatg ttttcccttt tttaaatagt ctgagatgcc gtctggaaca
    14041 aatgttccca cacgccaaat atccgaaacg ccgtctgaac cggatttccg cttcagacgg
    14101 catctgtatt tcaaaacagt cttacgccgt ttcttccaac tcgatggacg ccgccagaag
    14161 cgacaggcgt gccattacgc cgtaaacgta gaggcggttg tgttcgttgt ccacgtcgca
    14221 gtctttttca gagcgcggca tacccagcga gtcccattgt tcgaatacgc gcttgcaggc
    14281 ttcgggagct tcttgggagt tgtcgccgtt gccggtgggg atgctgttgg acagcggaac
    14341 aaacaccata ccgccggcgt tgaggttttc gtccgcaccg cgcccttcgt gtacgcggaa
    14401 aaagccgccg atgacgaagc ggtccatcat atacacgacg ggttcgcaca ccgcgccgtt
    14461 taaggtttca taagtataaa tcccttcttg gacaatcact tcgctgactt ccaaaccttc
    14521 tttgactttc gccattttat tgcggttttt acggttcaat ccgcgcactt cgtcggcgga
    14581 tttgacgctc atcacgccca tgccgtaagt gccggcatcg gctttgacga tgacgaaagg
    14641 tttgtcggta atgcccgatt cgtcgtattt ggcttgaatt ttcgccagca cacgttctac
    14701 cgcttccgcc aacgcgtctt cgccttcacg cccttggaag tccaaaccgc cgattttttc
    14761 aaaataaggg ttaatttgcc attcgtcgat gccgattaac ttggcaaatt cggcggcaac
    14821 ttggttgtac gcgccgaaat gatttgtttt gcggcgcgtc gtccaaccgc cgtgcaacgg
    14881 cggcaaaacg gtttggctga tgcctttgag gatgtcggga atgccggcgg acaaatcgtt
    14941 gttcaacaaa accacgcaag gcgaaaagcc gtctgcaaga tggacgcggt cgcgggtacg
    15001 caataaaggt tccaacagga ttttgtcgcc caatgcggtt tcaaattcgg tcggttcggt
    15061 tacttccgga ttcaggctgc ccaagcgcac ttcataccct gccgaacgca aaatctcgcc
    15121 gagggcgtaa acgttttgca ggtaaaacgt attgcgcgtg tggttttcgg gaataatcaa
    15181 tacggatttc gccgtttcac aggcgcgttg caccgcatct tgcgcggcaa ccgccgccag
    15241 cgggataaag ttgggattca gattattgaa gccgccgggg aacaaattca tatcgataga
    15301 cgaaattttg taaccggcat tgcgtatatc gaccgaaccg taaaacggcg ggcggtgtac
    15361 gctccactgc gtgcggaacc acgcctcgat tttggcgtga ttggacagga tttttgcctc
    15421 aaacgcctga agttgcgccg aatgttcggg cgacatcacc ggtaatttca tctttcgtct
    15481 gcctctgtgt gttttttgac aagatgcaga tgataatgcc tttgaaagaa tgacgacaag
    15541 tattctttcg tatcgaatca tgctttagat ataactgttt actgaaatgg acaatatgtc
    15601 taattttttc gttaaaattg tttgcaaaat aacaccggct caaaaattag acaaaatttg
    15661 ttgcgcggta taaagaatac gtctaaaatc cgcccaatcc gcattaccat ttatccaaaa
    15721 gaacaacatc atgacagcac aaaccctcta cgacaaactt tggaacagcc acgtcgtccg
    15781 cgaagaagaa gacggcaccg tcctgctcta catcgaccgc catttggtgc acgaagttac
    15841 cagccctcag gcatttgaag gcttgaaaat ggcggggcgc aagctgtggc gcatcgacag
    15901 cgtcgtctcc accgccgacc acaacacccc gaccggcgat tgggacaaag gcatccaaga
    15961 cccgatttcc aagctgcaag tcgatacttt ggacaaaaac attaaagagt ttggcgcact
    16021 cgcctatttt ccgtttatgg acaaaggtca gggcatcgta cacgttatgg gccccgaaca
    16081 aggcgcgacc ctgcccggta tgaccgtcgt ctgcggcgac tcgcacactt ccacccacgg
    16141 cgcattcggc gcactggcgc acggcatcgg cacttccgaa gtcgagcaca cgatggcgac
    16201 ccagtgcatt accgcgaaaa aatccaaatc catgctgatt gccgttgacg gcaaattaaa
    16261 agcgggcgtt accgccaaag acgtggcact ttacatcatc gggcaaatcg gcacggcggg
    16321 cggtacaggc tacgccgtcg agtttggcgg cgaagccatc cgcagccttt ctatggaagg
    16381 ccgcatgact ttatgcaata tggcgatcga agccggtgcg cgctcaggca tggttgccgt
    16441 cgaccaaacc accatcgact atgtaaaaga taaacccttc gcacccgaag gcgaagcgtg
    16501 ggacaaagcc gtcgagtact ggcgcacgct ggtgtctgac gaaggtgcgg tattcgacaa
    16561 agaataccgt ttcaacgccg aagacatcga accgcaagtc acttggggta cctcgcctga
    16621 aatggtttta gacatcagca gcaaagtgcc gaatcctgcc gaagaaaccg atccggtcaa
    16681 acgcagcggt atggaacgcg cccttgaata catgggcttg aaagccggta cgccattaaa
    16741 cgaaatcccc gtcgacatcg tattcatcgg ctcttgcacc aacagccgca tcgaagactt
    16801 gcgcgaagcc gccgccatcg ccaaagaccg caaaaaagcc gccaacgtac agcgcgtgtt
    16861 aatcgtcccc ggctccggtt tggttaaaga acaagccgaa aaagaaggct tggacaaaat
    16921 tttcattgaa gccggttttg aatggcgcga accgggctgt tcaatgtgtc tcgccatgaa
    16981 cgccgaccgc ctcgcaccgg ggcaacgctg cgcctccacc tccaaccgca attttgaagg
    17041 ccgtcaaggc aacggcggac gtacccacct cgtcagcccc gctatggcag ccgccgccgc
    17101 cgttaccggc cgctttaccg acatccgcat gatggcgtaa gtattttcag gcggtcttta
    17161 agaatttgac gcggccgtct gaaatatatc ccgtaaggca gaaacacctt taatattcaa
    17221 accaaggagt ttaaccatga acaaactttt cattaccgcc ctgtccgccc tcgccttgtc
    17281 cgcctgcgcc ggcacttggg agggcgcgaa acaagacacc gcccgcaacc ttgacaaaac
    17341 acaggccgcc gccgaacgcg ccgccgaaca aacaggcaac gccgtcgaaa aaggctggga
    17401 caaaaccaaa gaagccgtca aaaaaggcgg caatgccgtc ggacgcggca tttcccatct
    17461 cggcggaaaa atcgaaaacg ccaccgaata accgattcgc gatgccgtct gaaaccgctt
    17521 cagacggcat cgtcagcaca agacgcaaac ccatgaaagc ctttaccaaa attaccgcca
    17581 tcgtcgcccc gctcgaccgc agcaacgtcg ataccgacgc catcatcccc aaacaatttt
    17641 taaaatccat caaacgcagc ggcttcggcc ccaatgcctt tgacgaatgg cgttacctcg
    17701 accacggcga accaggcatg gacaacagca aacgcccgtt gaaccctgat ttctcgctga
    17761 accagccgcg ttaccaaggc gcgcaaatcc tgttgacgcg taaaaatttc ggttgcggct
    17821 cttcacgcga acacgcccct tgggcattgg acgactacgg cttccgcgcc gtcatcgccc
    17881 ccagcttcgc cgacatcttc tttaacaact gctacaaaaa cggccttttg cctatcgtgt
    17941 tgaccgaaga acaggttgac cggcttttca aagaagttga agccaacgaa ggctaccggc
    18001 tctccatcga ccttgccggg caaaccctga ccacccccgg cggcgaaaca ttagcattcg
    18061 acattaccga acaccgcaaa cactgcctct taaacggctt ggacgaaatc ggactgaccc
    18121 tgcaacacgc cgatgaaatt cacgcctttg aagaaaaacg ccgccaaagc cagccttggc
    18181 tgtttaacgg ttaaacctat gccgtctgaa gaccgttcag acggcattcc tgataacata
    18241 taattgctgc aactaatgta aacagagggg ctataaattg ctttcatctt tcaagcgggc
    18301 ttagcaacgc tctaaattaa tgcaatacag ctctatttca aataaatttt tagattttta
    18361 atatgcaaca gattaaattt attgacttat tttccgggat gagcggtatc aggaaaggat
    18421 ttgaacaagc ctgtcggaaa cagtcggttg cttgcgaatg tgtttttacc tcagaaatca
    18481 aaccggcagc tttggaagta ttgaagcaaa actaccctga tgaagtgccg tatggagata
    18541 taacgaaaat tgaaacggga gatattcccg attttgacat cttgttggca ggcttccctt
    18601 gccaggcttt ttctttcgcc ggaaaaagat tgggctttga agatacgcgg ggaacgcttt
    18661 tctttgatgt ggcaaggatt ttaaaggcaa aaaaaccaaa aggttttatt ttggaaaatg
    18721 tggaaggatt ggtgacgcac gatagaaaag atccgacaca aaaaatagga cgcaccctga
    18781 ccgttatttt ggaaaccttg gaaacattgg gctactatgt ttcttggaaa gttttaaatg
    18841 caaaagattt cggcattccc caaaacagga agcgcattta tctgacaggc agtttgaaat
    18901 ccaaacccga cttatctttt gaaacaaccc taagtccgaa attaaaaaat attttggaat
    18961 cgggactgcc taccgaaagc agtcctttca tcaaaaaatt gctaaagaaa tttcccccgt
    19021 ccgaactgta cggaaaatca gtaaaggaca aacggggagg gaaaaacaat atccacagtt
    19081 gggatattga attaaaaggc acagtaaccg aagaagagaa gcaattatta aatatgcttc
    19141 taaaagaacg gaggaagaaa aaatgggctt cagaaatcgg catcgattgg atggatggga
    19201 tgcctttgac aaaagcgcaa atttcaactt tctataaaca ccccaatctt caaaatattt
    19261 tggacagcct gacagataaa ggctatttgg ttttggagca tccgaaacaa aaaattggcg
    19321 ggcgaagaat caaagatgaa tccctgccca aaggctacaa tattgtttca ggaaaaaaat
    19381 catttgaaat caataaaata ttagacccaa atgatgttgc gccaacctta gttgcaatgg
    19441 atatggagca ccttttcgtc gttgacaacg gcggtttgcg cacacttacc ggaaaagaag
    19501 gtttacgctt attcggctat ccggacgatt attcgtttga tattcctaaa aaagacaaat
    19561 acgatttatt gggcaatacc gttgccgttc ctgtgattaa ggcggtatct gaaaggcttc
    19621 tgcatacttt ataaaccgat agggataaaa tggtaaaact tactgcacaa caaatatttg
    19681 ataagttgct gaatgaggaa aaaatcttat cggtcaatgg tcaaattaga tttttcttgg
    19741 gcgatgtgga tattatcgtc aaacaaaaag atgtcgtcgg caacatcatt caggaatggc
    19801 tcggcggatg gttgagaaaa agggaaattg aatttgatgt ttcaaccaat acccaaatgc
    19861 cccccgattt ctttttaaat aaaaaagacc gcagtagaga attgttggaa gtaaaggcgt
    19921 tcaaccgaaa tgccagtccg ggttttgata ttgcagattt taaaatgtat tctgatgaaa
    19981 tcattcataa accctatatg ctggatgtag attatttaat attcggttac gatatggacg
    20041 acaacggcaa tgtaaccatc aaggatttat ggcttaaaaa agtatggcaa attacgagaa
    20101 gcatggatgg gtgggcaatt aatcttcaag tcaaaaaagg cgtggtgcat aaaatccgcc
    20161 cgggtgtttg gtacagcata aataaaaaga atatgcctat gtttgaatgc ttggaagatt
    20221 ttgtttccgc aattgaagaa accgtttatc aaaacccggc aacacggcat aacgcatcct
    20281 tatggaaaaa gaaatttgag gaagcctata aaaaacacta caaccgatcg atttccatac
    20341 ctcgttggca cgaaattgca cacaaataca aaaagaaata acccttcaac catcaaccca
    20401 taaggaaact tgaaatgacc aaacatatcg ccatcctccg aggtgacggc atcggtcccg
    20461 aaatcgtcgc cgaaaccgtc cgcgtactcg acaaactcat cgcccaaggt ttggatgccg
    20521 gctacgaata cgccccattg ggcggcgaag cctatgacga atacggtcat ccttatcccg
    20581 aatttacgca aaacctctgc cgcaaagccg atgccgtcct gcttggtgca gtcggttctc
    20641 ctcaatacga caacctcgac cgtccgttgc gccctgagcg cggcctgttg gcaatccgta
    20701 aggatttgaa cctgtttgcc aatttgcgtc ctgctgtttt atatcccgaa ttagccaacg
    20761 cctccacgct gaagcctgaa atcgttgccg gtttggatat tttgattgtg cgcgaactca
    20821 ccggcgacat ctatttcggc gaaccgcgcg gcatccgcgt tctggaaaac ggcgaacgcg
    20881 aaggctacaa caccatgaaa tacagcgaaa gcgaaatccg ccgtattgcc catgttgcct
    20941 tccaatccgc ccaaaaacgc agcaaaaaag tctgttccgt aggcaaagcc aacgttttgg
    21001 aaaccaccga attgtggcgc gaaatctttg aagaaatcgg caaagagtac cctgatgtcg
    21061 agctttccca tatgtacgtc gacaacgccg ccatgcagct cgtgcgtgcg cccaaacaat
    21121 tcgacgtcat tgccaccggc aacatcttcg gcgacattct ctccgacgaa gcctccatgc
    21181 tgaccggctc catcggtatg ctgccttccg cctcgctgga cgaaaacggc aaaggcctgt
    21241 acgaaccgtc tcacggctcc gcccccgaca tcgccggaca aaacaaagcc aacccgctgg
    21301 ccaccatcct ctcgctcgca atgttgctgc gttacagcct gaacgacgaa gcgcgcgcgc
    21361 aacaagttga aaacgccgtc caaaaagtgc tgcaacaagg cttgcgtacc agcgacattt
    21421 acgaagaagg cacaaaactc gtttcctgct ccgaaatggg cgatgcggta ctcgccgcct
    21481 tgtaaaaaaa caaagcgcgg atcacaccgc gctttttcat ccgccctttt ccgcccgccc
    21541 cgttcgtcaa ccgcctgcaa acccaccgtt taccggcagg aaatgccata aatccctgcc
    21601 tatgttagga taaacgcctt taccggccca cacaaaggat tatcatcatg aaaaaaatca
    21661 tcttcgccgc actcgcagcc gccgccatca gtactgcctc cgccgccacc tacaaagtgg
    21721 acgaatatca cgccaacgcc cgtttcgcca tcgaccattt caacaccagc accaacgtcg
    21781 gcggttttta cggtctgacc ggttccgtcg agttcgacca agcaaaacgc gacggtaaaa
    21841 tcgacatcac catccccatt gccaacctgc aaagcggttc gcaacacttt accgaccacc
    21901 tgaaatcagc cgacatcttc gatgccgccc aatatccgga catccgcttt gtttccacca
    21961 aattcaactt caacggcaaa aaactggttt ccgttgacgg caacctgacc atgcacggca
    22021 aaaccgcccc cgtcaaactc aaagccgaaa aattcaactg ctaccaaagc ccgatggaga
    22081 aaaccgaagt ttgtggcggc gacttcagca ccaccatcga ccgcaccaaa tggggcatgg
    22141 actacctcgt taacgttggt atgaccaaaa gcgtccgcat cgacatccaa atcgaggcag
    22201 ccaaacaata aatcttgatg cgaatcagca caaatgccgt ctgaacgtcc ttcaaacggc
    22261 atttgtgccg tcttcatcaa accgccccgc caacggtaag ccgatatggc ggagcacaat
    22321 ccgccgaaag atatttcagc ggcaggcagg gcttgccgga aagtccggaa a
//
LOCUS       DAWITQ010000014        21827 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.014, whole genome shotgun sequence.
ACCESSION   DAWITQ010000014 DAWITQ010000000
VERSION     DAWITQ010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21827)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21827)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21827
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.014"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(107..1030)
                     /gene="era"
                     /locus_tag="WIX18_000482"
     CDS             complement(107..1030)
                     /gene="era"
                     /locus_tag="WIX18_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004286080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HEZ5237638.1"
                     /translation="MDIETFLAGERAAGGYRCGFVAIVGRPNVGKSTLMNHLIGQKIS
                     ITSKKAQTTRNRVTGIYTDDTAQFVFVDTPGFQTDHRNALNDRLNQNVTEALGGVDVV
                     VFVVEAMRFTDADRVVLKQLPKHTPVILVVNKIDKDKAKDRYALEAFVAQVRAEFEFA
                     AAEAVSAKHGLRIANLLELLKPYLPESVPMYPEDMVTDKSARFLAMEIVREKLFRYLG
                     EELPYAMNVEVEQFEEEDGLNRIYIAVLVDKESQKAILIGKGGERLKKISTEARLDME
                     KLFDTKVFLKVWVKVKSGWADDIRFLRELGL"
     gene            complement(1077..1796)
                     /gene="rnc"
                     /locus_tag="WIX18_000483"
     CDS             complement(1077..1796)
                     /gene="rnc"
                     /locus_tag="WIX18_000483"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HEZ5237639.1"
                     /translation="MKDDVLKQQAHAAIQKRLGYAFRDISLLRQALTHRSHHAKHNER
                     FEFVGDSILNYTVARMLFDTFPKLTEGELSRLRASLVNEGVLAEMAAEMNVGDGLYLG
                     AGELKSGGFRRPSILADAMEAMFAAVSFDADFNTAEKVVRHLFADRVRCADFQNQAKD
                     GKTALQEALQARRFALPKYRIEEQIGHANDSMFVVSCDLGELGFVCRAKGTSRKAAEQ
                     EAAKEALKWLEEKLPLKKKKK"
     gene            1963..2286
                     /locus_tag="WIX18_000484"
     CDS             1963..2286
                     /locus_tag="WIX18_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2185 domain-containing protein"
                     /protein_id="HEZ5237640.1"
                     /translation="MNAFAQALSSALDRCIATNTVAKQNRPVGFLYREAPVFENDSGW
                     RFFSGDETDEYTDDPDNFSIVSLADIAKTNPETAALLSQPEGSAWELAEDGTFQTVAD
                     WQPQD"
     gene            2334..2810
                     /locus_tag="WIX18_000485"
     CDS             2334..2810
                     /locus_tag="WIX18_000485"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HEZ5237641.1"
                     /translation="MNTIAPNLDGKHLRIGIVQARFTNEIGSEMLKVCCRTLQELGVA
                     DENITVATVPGALEIPIALMNLASSEKFDALIAIGVVIRGETYHFELVSNESGAGVSR
                     VALDYNIPIANAVLTTENDAQAIERIEEKASDAAKVAVECANLVNLLLEEQFEDEE"
     gene            2888..3313
                     /gene="nusB"
                     /locus_tag="WIX18_000486"
     CDS             2888..3313
                     /gene="nusB"
                     /locus_tag="WIX18_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEZ5237642.1"
                     /translation="MKTARRRSRELAVQAVYQSLINRTAAPEIAKNIREMPDFAKADE
                     ELFNKLFFGTQTNAADYIQKIRPLLDRDEKDLNPIERAVLLTACHELSAMPETPYPVI
                     INEAIEVTKTFGGTDGHKFVNGILDKLAAQIRPDEPKRR"
     gene            complement(3680..4714)
                     /gene="pyrC"
                     /locus_tag="WIX18_000487"
     CDS             complement(3680..4714)
                     /gene="pyrC"
                     /locus_tag="WIX18_000487"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEZ5237643.1"
                     /translation="MQTLTIIRPDDMHLHLRDGDALKAVVPYTARQMGRAVIMPNLKP
                     PVVSVADALAYKARIMAALPEGSAFEPLMTLYLTDNATSELVREAKAAGIVAFKLYPA
                     GATTNSDSGVTDLFKLIPVLEEMAKQGILFLVHGEVTDPEIDIFDREAAFIGRVMKPV
                     LAQVPNLKVVFEHITTAEAARLVLEAGDNVAATVTPQHLLLNRNDLLVGGVRPHHFCL
                     PVLKRETHRQALVAAVTGEKAHKFFLGTDSAPHAKSAKENACGCAGMFSAMTAIELYA
                     EVFEKAGALDKLEAFTSKNGARFYGIPENAGTITLVKQSQTVPASVPYGDGELVPMRA
                     GGEIGWTVQY"
     gene            complement(4774..5379)
                     /locus_tag="WIX18_000488"
     CDS             complement(4774..5379)
                     /locus_tag="WIX18_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237644.1"
                     /translation="MPSEMRMSRLMLLLSAFVLAACNAQNRQSCVRHQDFARVAVDLF
                     RSACVLTQGSFEPVSKFAAVGHFVPVGKEDLSRLPPAVAEPDVQALWTLERDGGIYYL
                     SLPRDCCSVKAERADSAVLLEHFDGLVRQPPKNTNIELRAEQSVQALFETRQISYAWR
                     ESGSPEETVLTAQTADSPDLPVQAVLNLTHRSHNGKPLILP"
     gene            complement(5380..5604)
                     /locus_tag="WIX18_000489"
     CDS             complement(5380..5604)
                     /locus_tag="WIX18_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HEZ5237645.1"
                     /translation="MNSETLDVTGLKCPLPILRAKKALAQMQQGDVLTVLATDGGAPG
                     DFEAFCRQTGHVLLDASEQDGVFTLVVKHK"
     gene            5713..6324
                     /locus_tag="WIX18_000490"
     CDS             5713..6324
                     /locus_tag="WIX18_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNP1-like family protein"
                     /protein_id="HEZ5237646.1"
                     /translation="MRRTALLLLALTAGTSLAAGFNQKDTPINTRYRETPEEAAAREF
                     KEHTAKLPPLPDTHSDGWFDIYVDENYGKQPKILLDSLQIMPAPDGSIRYILNIRSDK
                     GYDNLTAEGIFCARFSIRFGNGKPSSYKVFGYGDTVNRRWIQPRNAEWKPIGGTLSRN
                     DALRTVLYQAFCEGGVPADTKGLVQRLKERAGRYAPSMKPHDK"
     gene            complement(6384..7256)
                     /locus_tag="WIX18_000491"
     CDS             complement(6384..7256)
                     /locus_tag="WIX18_000491"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HEZ5237647.1"
                     /translation="MSWLDKILPPKIKNRSKDGSSNVPEGLWHKCPSCSATVYSTELQ
                     QNNQVCPKCNHHNPLSARQRLNLLLDEDGREEVAGNVKPTDPLKFKDGKKYPDRLSAA
                     RKLTGEDDALVVMKGKMNGLPVVVAAFEFRFIGGSMGSVVGERFVQGIRRAVADNCPF
                     VCVAASGGARMQEGVNSLMQMTKTSAALHLLTEKRLPFISVLTDPTMGGVSASFAFLG
                     DVVLAEPNALIGFAGPRVIEQTVRETLPESFQRAEFLLEKGAIDQIVDRRDMKRRISD
                     LITLLCRQDKVSAA"
     gene            complement(7293..8078)
                     /locus_tag="WIX18_000492"
     CDS             complement(7293..8078)
                     /locus_tag="WIX18_000492"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HEZ5237648.1"
                     /translation="MSRIRQAFAALDGGKALIPYITVGDPDIRTTLALMHGMVANGAD
                     ILELGVPFSDPMADGPVIQRAAERALANGISLRDVLDVVRKFRETDTQTPVVLMGYLN
                     PVHKMGYREFAQEAAMAGVDGVLTVDSPVETIDPLYRELKDNGVDCIFLIAPTTTEDR
                     IKTIAELAGGFVYYVSLKGVTGAASLDTDEVSRKIEYLHQYIDIPIGVGFGISNAESA
                     RKIGRVADAVIVGSRIVKEIENNAGNEAAAVGALVKELKDAVR"
     gene            complement(8505..8597)
                     /locus_tag="WIX18_000493"
     tRNA            complement(8505..8597)
                     /locus_tag="WIX18_000493"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8561..8563),aa:Ser,seq:gct)
     gene            complement(8754..8951)
                     /locus_tag="WIX18_000494"
     CDS             complement(8754..8951)
                     /locus_tag="WIX18_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237649.1"
                     /translation="MAHGHKARADGLAQQPDKAAEANEEEYLTKALSQNLLSTLDAAL
                     ARFPEDAWFQEIKQDAQKHFA"
     gene            complement(9056..9373)
                     /locus_tag="WIX18_000495"
                     /pseudo
     CDS             complement(9056..9373)
                     /locus_tag="WIX18_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237659.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
     gene            complement(9396..10157)
                     /gene="kdsB"
                     /locus_tag="WIX18_000496"
     CDS             complement(9396..10157)
                     /gene="kdsB"
                     /locus_tag="WIX18_000496"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HEZ5237650.1"
                     /translation="MTEFVVLIPARLDSSRLPGKALADIHGKPMVVRVAEQAAKSKAA
                     RVVVATDHPDIQTVCQAHGVEVVMTSNRHESGTTRLAEAAAALKLPQHLVVVNVQGDE
                     PLIAPELIDRTAEVLVENNVQMATAAHELHDFDELMNPNAVKVVLDKNRNAIYFSRAP
                     IPYLRDAMRAGKREMPFETAVLRHIGIYAYRVGFLQRYTEMSVSPLETIESLEQLRVL
                     WHGYPIAVETAKEAPAAGVDTQEDLDRIRAVFQTI"
     gene            complement(10154..10336)
                     /locus_tag="WIX18_000497"
     CDS             complement(10154..10336)
                     /locus_tag="WIX18_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HEZ5237651.1"
                     /translation="MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPY
                     MLENEARTLSEEELKA"
     gene            complement(10405..10986)
                     /locus_tag="WIX18_000498"
     CDS             complement(10405..10986)
                     /locus_tag="WIX18_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HEZ5237652.1"
                     /translation="MKLKTLLLPFATLALCTNAFAAPPSDASLARWLDTQNFDRDIEK
                     NMIEGFNAGFKPYADKALAEMPEAKKDQAAKAFNRYRENVLKDLITPEVKQAVRNTLL
                     KNAREIYTQEEIDGMIAFYGSPVGQSVVAKNPRLIKKSMSEIAVSWTALSGKIARHHL
                     PAFTEELRRIICGGKNPDAGCKQAGQVGKRHQK"
     gene            complement(11192..12226)
                     /locus_tag="WIX18_000499"
     CDS             complement(11192..12226)
                     /locus_tag="WIX18_000499"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_025462052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HEZ5237653.1"
                     /translation="MPNCFKFHTVIERHWQKPYPVLSFLLKPLSGLFAKIAAKRRTDF
                     LSGKRQSEKLPVPVVVVGNIHAGGTGKTPIAAALVSGLQEKGVKVGIISRGYGRKSKA
                     VHVLNAASRAEDAGDEPLLLFSKTGAPTAVGSSRAEAGRALLAAHPDIGLIVADDGLQ
                     HYALRRDVEIAVFPAADTGRTDLDLLPNGNLREPLSRLDSVDTVVVSGGKADALFRPS
                     ENMFHSRIEAGRIYRLNNPSEILDTGRLKNQTVVAVAGIAKPARFFDSLRNMGITVKR
                     TVALPDHADISAADLPDADAVIITEKDAVKFSDGICTDNVWVLPVCAIIEPDLAAFVL
                     ERLEDVPKAV"
     gene            complement(12266..12536)
                     /locus_tag="WIX18_000500"
                     /pseudo
     CDS             complement(12266..12536)
                     /locus_tag="WIX18_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713445.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(12619..13899)
                     /locus_tag="WIX18_000501"
     CDS             complement(12619..13899)
                     /locus_tag="WIX18_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme"
                     /protein_id="HEZ5237654.1"
                     /translation="MENSLKEAALKFHELPVPGKISVTPTKSLATSKDLALAYSPGVA
                     APCMEIHADPQNAYKYTAKGNLVAVISNGTAVLGLGDIGALAGKPVMEGKGVLFKKFA
                     GVDVFDIEIDEKDPQKLVDIIAALEPTFGGINLEDIKAPECFYIERELRKRCKIPVFH
                     DDQHGTAIITAAAVLNALRFTGRKIEEATLVCSGAGAAAIACLNQLLDLGLKRENVTV
                     CDSKGVIYQTREDKDRMDESKKFYAVEDNGQRVLVDAVKGKDIFLGLSGANLLTPEML
                     NTMNEKPIVFAMANPNPEILPPLAKETRPDVVIGTGRSDFPNQVNNVLCFPFIFRGAL
                     DVGATTINEEMKRSCVYALADLAMEEVTEEVVAAYGKKFEFGAEYLIPTPFDSRLLPR
                     VATAAAKAAMESGVATRPIADFEAYAAKLGEWKL"
     gene            complement(14121..14741)
                     /locus_tag="WIX18_000502"
     CDS             complement(14121..14741)
                     /locus_tag="WIX18_000502"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEZ5237655.1"
                     /translation="MKPQFITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTP
                     VGEALREILLNPETKAGLRAETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFA
                     YQGGGRGMPSEDIEILEHWVQGGLRPDLTLLLDVPLEVSMARIGQSREKDRFEQEQAD
                     FFMRVRSVYLNRAAACPERYAIIDSNRSLDEVRNNIEKVLDGHFGC"
     gene            complement(14801..15796)
                     /gene="mltG"
                     /locus_tag="WIX18_000503"
     CDS             complement(14801..15796)
                     /gene="mltG"
                     /locus_tag="WIX18_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEZ5237656.1"
                     /translation="MLRKLLKWSAVFLTVSAAVFAALLFVPKDNGRAYRIKIAKNQGI
                     SSVGRKLAEDRIVFSRHVLTAAAYVLGVHNRLYTGTYRLPSEVSAWDILQKMRGGRPD
                     SVTVQIIEGSRFSHMRKVIDATPDIEHDTKGWSNEKLMAEVAPDAFSGNPEGQFFPDS
                     YEIDAGGSDLRIYQIAYKAMQRRLNEAWESRQDGLPYKNPYEMLIMASLIEKETGHEA
                     DRDHVASVFVNRLKIGMRLQTDPSVIYGMGAAYKGKIRKADLRRDTPYNTYTRGGLPP
                     TPIALPGKAALDAAAHPSGEKYLYFVSKMDGTGLSQFSHDLTEHNAAVRKYILKK"
     gene            15880..16452
                     /gene="ampD"
                     /locus_tag="WIX18_000504"
     CDS             15880..16452
                     /gene="ampD"
                     /locus_tag="WIX18_000504"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HEZ5237657.1"
                     /translation="MDNHAEAHWQNGWLQSIRHTPSPNFSPRETGETVSLIVLHNISL
                     PPFEYGTDAVEKLFANRLDPDGHPFFSLIHTLRVSSHFLIKRDGETVQFVSCDNMAYH
                     AGVSSFRGREKCNAFSIGIELEGCDFEPFTEAQYRSLEALLDAICRRYPITAVTGHQD
                     IAPGRKTDPGHFFDWRRIRGKGFPVDRNAV"
     gene            16646..17932
                     /locus_tag="WIX18_000505"
     CDS             16646..17932
                     /locus_tag="WIX18_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA"
                     /protein_id="HEZ5237658.1"
                     /translation="MIYIVLFLAAVLAVVAYNMYQENQYRKKVCDQFGHSDKDALLNS
                     KTSHVRDGKPSGGSVMMPKPQPAVKKTAKPQDPAMRNLQEQDAVYIAKQKQAKASPFK
                     TEIETALEESGIIGNSAHTVSEPQTGHSAPKPADAPAKPAPVPQTPAKPLITLKELSK
                     VELPWFDVRFDFISYIALTEAKELHALPRLSNRCRYQIVGCTMDDHFQIAEPIPGIRY
                     QAFIVGIQAVSRNGLASQEELSAFNRQVDAFAQSMGGQTLHTDLAAFIEVASALDAFC
                     ARVDQTIAIHLVSPTSISGVELRSAVTGVGFVLEDDGAFHYTDTSGSTMFSICSLNNE
                     PFTNALLDNQSYKGFSMLLDIPHSPAGEKTFDDLFMDLAVRLSGQLNLNLVNDKMEEV
                     STQWLKDVRTYVLARQSEMLKVGIEPGGKTALRLFS"
     gene            18080..20605
                     /gene="ligA"
                     /locus_tag="WIX18_000506"
     CDS             18080..20605
                     /gene="ligA"
                     /locus_tag="WIX18_000506"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HEZ5237659.1"
                     /translation="MNPNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEY
                     YTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVGGEPLAGFAEVRHEVPML
                     SLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGGKPEYVIEPKFDGLAISLLYRDGVL
                     VQAATRGDGTTGEDVTQNIKTVANIPLRLHGENTPELIEVRGEVLMQKADFAALNKRQ
                     AENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSVARQQGGFVAEEHIQELAYF
                     QALGFSLPNGNFGCFKNIDEVLAFYEQMQQKRPELPYEIDGMVVKVNSLAQQRELGFI
                     SRAPRWAIAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVGGVTVTNATLHNQ
                     DEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMQETAVAVSDGIGHRQDDLFAET
                     PSANQTQSVPLHKPYRLPTHCPICRSEIEREEGEAVARCSGGMLCQAQRAQGLIHFAS
                     RKAMDIDGLGEKQIEQLVAQDLVRHFADLYRLDIPTLQKMKETTDKTVAESDQTPSEG
                     SSVGASGKHKKQPVKWAENILGGIESGKTPELARFLFALGIRHVGERTAKTLAQAFGT
                     LERVRRAPEPVLACLPDIGTVVAHSIAHFFAQAEQQAMIDELLAAGVAPQTQAVTIPP
                     ARHAEPQRWIARLPDFKISENKAQALWELAGKNIEGLQNDKALPADWQAWRSEPQNAA
                     LLENLKTFFAQMPSEDEAAQGSDGINKAVAGKTFVLTGTLPTLKRDQAQSLIEAAGGK
                     VSGSVSKKTDYVVAGEAAGSKLEKANALGVSVLSEAELLTLLG"
     gene            20638..>21827
                     /locus_tag="WIX18_000507"
     CDS             20638..>21827
                     /locus_tag="WIX18_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase-like protein"
                     /protein_id="HEZ5237660.1"
                     /translation="MSTFPNHTMHTISFPNRTRLTALPPLSLYIHIPWCIKKCPYCDF
                     NSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFGGGTPSLFQAESIDRLLSG
                     VRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGVQSFNDDMLSRLGRVHN
                     GKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIATGATHISAYHLTMEP
                     NTPFGHTPPKGLPQDEAALDIEDAVHGALESAGFVHYETSAFAKPAMQCRHNLNYWQF
                     GDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQNRPSEAVERKTVAAEDLPFEF
                     MMNALRLTDGVPAAMLQERTGVPSAKIMAQIETARQKGLLETDPAVFRPTEKGRLFLN
                     DLLQ"
BASE COUNT         5213 a         6440 c         5342 g         4832 t
ORIGIN      
        1 tgcacagata atatcaaccc gtttttaaca aagatattcc cgattgaaac aaaatgccgt
       61 ctgaaacctg ttcggacggc atttgcgtaa agttcagcaa gaaaaactac aaacccagct
      121 cgcgcaggaa gcggatgtcg tccgcccaac cggatttgac tttgacccag accttcaaaa
      181 atactttggt atcaaacagt ttttccatat ccaaccgcgc ttcggtggaa attttcttca
      241 aacgctcccc gcctttgccg attaaaatcg ccttttggct ttccttatcg accaaaacgg
      301 cgatatagat gcggttcaaa ccgtcttcct cttcaaactg ctccacttcg acgttcatcg
      361 cataaggcaa ttcctcgccc aaatagcgga acaatttttc acgcacgatt tccatcgcta
      421 aaaaacgcgc cgatttgtcc gtaaccatat cttcgggata catcggcacg ctttcgggca
      481 gatacggctt gagcagctcc aacaggttgg caatccgcaa tccgtgtttc gcactgaccg
      541 cctccgccgc cgcaaattca aattcggcgc gcacttgggc aacaaacgcc tccagcgcgt
      601 aacggtcttt cgccttgtcc ttgtcgattt tgttgaccac taaaatgacc ggcgtgtgct
      661 tgggcagttg tttcaacacg acacggtcgg catcggtaaa gcgcatcgct tccacgacga
      721 aaaccaccac atccacgccg ccaagcgcct cggtaacgtt ttgattcagc ctgtcgttga
      781 gcgcgttgcg gtggtcggtt tgaaagccgg gcgtatcgac aaacacgaac tgcgcggtat
      841 cgtcggtata aatccccgtt acgcggttgc gcgtcgtctg cgcctttttg ctggtgatgc
      901 tgattttctg accgatgaga tggttcatca gcgttgattt gcccacgttc ggacgaccga
      961 caatcgccac gaagccgcaa cggtatccgc cggcggcgcg ttcccctgca aggaaggttt
     1021 caatatccat attcgctttc atatccacat ttcagacggc atattcacgc gccgcctcat
     1081 ttctttttct tcttcagcgg cagcttctct tccagccatt tcaaagcctc tttcgccgcc
     1141 tcctgttccg ccgccttgcg gctcgtccct ttggcacggc acacgaaacc cagttcgccc
     1201 aaatcgcagg aaaccacaaa catactgtcg ttggcatggc cgatttgctc ttcgatacgg
     1261 tatttcggca aagcaaagcg gcgtgcctgc aacgcctcct gcaaagcagt tttgccgtct
     1321 tttgcctgat tttggaaatc ggcacaccgg acgcggtcgg caaacaaatg gcgcaccacc
     1381 ttttccgccg tgttgaaatc ggcatcgaag ctgaccgccg caaacatcgc ctccatcgcg
     1441 tccgccagta tcgaaggccg tctgaagccg ccgctcttca actcgcccgc ccccaagtac
     1501 agaccgtcgc cgacattcat ttccgccgcc atttccgcca gcacgccctc attgaccaga
     1561 cttgcccgca accgcgacaa ctcgccctcg gtcaacttcg gaaacgtgtc aaacagcatc
     1621 cgcgccaccg tataattcaa aatcgaatca ccgacaaact cgaaccgctc gttgtgcttc
     1681 gcatgatggc tcctgtgcgt caaagcctgc cgcaaaagcg aaatatcgcg gaacgcgtag
     1741 cccagtctct tctgtatcgc cgcgtgtgcc tgctgtttca aaacatcgtc tttcattacc
     1801 gtcttccgca aaaaacagcc cgaatgcgtt tccatactcc aaaaatacag aaacacctta
     1861 aggctgcaaa cggcgcacat tgtaccacca aaccgccgcc gtctgccgac aacgcacgaa
     1921 tcgtggtaaa atccgtaagt tttcccccaa cgtattcccg taatgaacgc atttgcacaa
     1981 gcactttcct cggcactcga ccgctgtatc gccaccaaca ccgtcgccaa acaaaaccgg
     2041 cccgtcggct tcctctaccg cgaagccccc gtttttgaaa acgacagcgg ctggcgtttc
     2101 ttcagcggcg acgagaccga cgaatacacc gacgatcccg acaacttcag catcgtcagc
     2161 ctcgccgaca tcgccaaaac caaccctgaa accgccgcac tgctttccca acccgaaggc
     2221 agcgcatggg agcttgccga agacggcaca ttccaaaccg tcgccgactg gcagccgcaa
     2281 gactgaaacc ttcagacggc attccgaaac ctccgaatac caaaggacac ccaatgaaca
     2341 ccatcgcccc caacctcgac ggcaaacacc tccgcatcgg catcgtacag gcacgtttca
     2401 ccaacgaaat cggcagcgaa atgctcaaag tctgctgccg caccctccaa gaattgggcg
     2461 tggcagacga aaacattacc gtcgccaccg tacccggcgc acttgaaatc cccatcgcac
     2521 tgatgaacct tgcctcttcc gaaaagtttg acgcactgat tgccatcggt gtcgtcatcc
     2581 gtggcgaaac ctaccatttc gagctggttt ccaacgaatc cggagcaggg gttagccgcg
     2641 tcgcactcga ctacaacatc ccgattgcca atgccgtcct aaccaccgaa aacgacgcgc
     2701 aggcaatcga acggattgaa gaaaaagcct cggatgccgc caaagtcgcc gtcgaatgcg
     2761 ccaacctcgt caacctgctg ctcgaagaac agtttgaaga cgaagaataa caaacagggc
     2821 gtacaccaat acgccctttc cgtttcagac ggcataccgt gccgcccaac cgtttcaagg
     2881 aaaaatcatg aaaacagccc gccgccgttc ccgcgagctt gccgtacaag ccgtttacca
     2941 atcccttatc aaccgcaccg ccgcgcccga aattgctaaa aacatccgcg aaatgcccga
     3001 ctttgccaaa gcggacgaag aattgttcaa caaacttttc ttcggtacgc aaaccaacgc
     3061 agcggactac atccaaaaaa tccgccccct gctcgaccgc gacgaaaaag acctcaatcc
     3121 catcgaacgc gccgtcctgc tgaccgcctg ccacgagctg tccgccatgc ccgaaacacc
     3181 ctaccccgtc atcatcaacg aagccatcga agttaccaaa accttcggcg gcacggacgg
     3241 gcacaaattc gtcaacggca tcctcgacaa actcgccgcc caaatccgcc ccgacgagcc
     3301 caaacgccgt tgatgcatca caaatttaaa gaaagttcta tgtccttatt tctgctttct
     3361 ttgtttcgtc attcccacgc aggtgggaat ttggtttttt gaattttggg tatttcaaat
     3421 aaattctgaa acttcaatct cgtcattccc gcgcaggcgg gaatccggtt ttttgagttg
     3481 ctgccgtttt tgataaactt tggtcgcatc gaatttctgg attcctgcct tcgtgggaat
     3541 ggcgaaattt gaaaattgtg ggaatttatc ggaaataacc gaaacgtaac aaactcaaac
     3601 gccgttgacg tatcaatcag tcagcaacac aaatgccgtc tgaaaaacct ttcagacggc
     3661 attttgcttg accgttcaat caatactgta ccgtccagcc gatttcgccg cccgcgcgca
     3721 tcgggacaag ttcgccgtcg ccgtagggaa cacttgcggg gacggtttgg ctttgtttga
     3781 cgagggtgat cgtgccggcg ttttccggaa tgccgtaaaa ccttgcgccg tttttcgagg
     3841 taaaggcttc gagtttgtcc aacgcgcctg ctttttcaaa cacttcggcg taaagctcga
     3901 tggcggtcat cgcgctgaac ataccggcgc aaccgcaggc gttttcttta gcggatttgg
     3961 cgtgcggcgc ggaatctgtg ccgaggaaga atttgtgcgc cttctcgccg gtaacggcgg
     4021 caaccaatgc ctgacggtgg gtttcgcgtt tgagtacggg caggcagaaa tgatgggggc
     4081 gcacgccgcc gaccaagagg tcgttgcggt tgagcaagag gtgttgcggg gtaacagtgg
     4141 cggcaacgtt gtcgcctgct tccaaaacga ggcgggcggc ttcggcggtg gtgatgtgtt
     4201 cgaacacgac tttaagattt ggtacttgcg ccaaaacggg tttcatcacg cgcccgataa
     4261 aggcggcttc acggtcgaag atgtcgattt cggggtcagt tacttcgccg tgaacaagga
     4321 acaggatgcc ctgtttcgcc atttcttcca aaacggggat aagtttgaac aggtcggtta
     4381 cgccggaatc ggaattggtg gtcgcgccgg cggggtagag tttgaaggca acgatgccgg
     4441 cagctttggc ttcgcgtaca agttcggacg tggcgttatc agtcaaataa agcgtcatca
     4501 acggctcaaa cgcgctgcct tcgggcaacg ccgccataat gcgcgctttg taggcaagcg
     4561 cgtcggcaac gctgacgaca ggcggtttga gattgggcat aatcacggcg cgccccatct
     4621 gtctggcggt ataaggcaca acggctttga gcgcgtcgcc gtcgcgcagg tgcaggtgca
     4681 tatcgtcggg gcggataatg gtcagggttt gcatggtttt cctttgtttt atttgaatgt
     4741 tcagacggca tgccgacttt atgccgtctg aagttagggg agaattaggg gtttcccgtt
     4801 gtgggaacgg tgcgtcaggt tcaaaactgc ctgtacgggc aaatccgggg aatcggcggt
     4861 ttgtgcggtc aatacggttt cttcggggct gcccgattcc cgccaggcat agctgatttg
     4921 cctggtttca aacagtgcct gcaccgactg ttcagccctc aattctatat tggtattttt
     4981 cggcggctgt cggacaagtc cgtcaaaatg ttccaaaagc acggcactgt ctgcccgctc
     5041 ggctttcaca ctgcaacagt cgcgcggcag gctcaaataa taaatgccgc catcgcgttc
     5101 aagcgtccac aacgcctgta catcgggttc tgcaacagcg ggcggcagac gggacaggtc
     5161 ttcctttccg acagggacaa aatgtccgac agcggcaaac ttggaaactg gttcgaaact
     5221 gccttgagtc aggacgcagg cactccgaaa caaatcgacg gctacacgtg cgaaatcctg
     5281 atgccgtaca caggattgcc ggttttgggc attacacgca gcaagcacaa atgccgacag
     5341 caataacatc aatcgggaca tccgcatttc agacggcatt tatttgtgct tgacgaccag
     5401 cgtgaacacg ccgtcctgtt cggaagcatc caacagcaca tgaccggttt ggcggcaaaa
     5461 agcctcaaaa tcccccggtg cgccgccgtc ggttgccaga acggtcaaca cgtcgccctg
     5521 ctgcatttgc gccaaagcct ttttcgcccg caaaatcggc aggggacatt tcaatccggt
     5581 tacgtctaaa gtttcgctgt tcatcgtttg taccgtttaa aaaatgggaa tcggggggag
     5641 attatacccc agttgcttgc agcccccttt gccaacccat aaaataacgc cgttttcaat
     5701 ttggagaaac ttatgcgccg caccgccctc ctgctgctcg cactcaccgc cggcacgtcc
     5761 cttgctgccg gcttcaacca aaaagacacg ccgatcaaca cccgctaccg cgaaacgccc
     5821 gaagaagccg ccgcccgcga atttaaagaa cataccgcca aactgccgcc gctgcccgat
     5881 acgcactcgg acggctggtt tgacatttat gtggatgaaa attacggcaa acagccgaaa
     5941 atcctgctcg acagcctgca aattatgccc gcgcccgacg gcagcatccg ctacattctc
     6001 aatatccgct ccgacaaagg ctacgacaac ctgactgccg aaggcatatt ctgcgcccgc
     6061 ttctccatca ggttcggcaa cggcaaacct tcctcctata aagtgttcgg ctacggcgac
     6121 acggtcaacc gccgctggat acagccccga aacgccgaat ggaaaccgat aggcggtaca
     6181 ttaagccgca acgacgcact gcgcaccgtc ctgtatcagg cattctgcga gggcggtgta
     6241 cccgccgaca cgaaaggttt ggtacaacgc ctgaaagaac gtgccggacg ctatgccccg
     6301 tcgatgaagc cgcacgacaa ataaccagac acaaaaatac cgtctgaaac atcggtttca
     6361 gacggtattc gattcatcag ccatcaagcg gcggaaactt tgtcctgacg gcacaacagc
     6421 gtaatcaaat cactgatgcg ccgcttcata tcgcggcggt cgacaatctg gtcgattgcg
     6481 cctttttcca gcaggaactc ggcgcgttgg aagctttccg gcagcgtttc gcgcaccgtc
     6541 tgctcaatca cgcgcggacc ggcaaaaccg atcagcgcgt tcggttcggc aagcacgaca
     6601 tcgcccaaaa atgcgaagct ggcggatacg ccgcccatag tcggatcggt caacaccgat
     6661 ataaatggca ggcgtttttc cgtcagcaaa tgcagcgcgg cactggtttt cgtcatctgc
     6721 atcaatgagt tcacaccctc ctgcatacgc gcaccgccgg aagccgccac acagacgaac
     6781 ggacaattgt cggcaaccgc ccgacggata ccttgtacga atcgttcgcc cacaaccgaa
     6841 cccatcgaac cgccgataaa gcggaattca aacgcggcaa cgacgacggg cagaccgttc
     6901 atcttgcctt tcattaccac caaagcatca tcttccccgg tcagcttgcg tgccgcactc
     6961 aaacgatccg gatatttttt gccgtcttta aacttcaaag gatcggtcgg tttgacattt
     7021 ccggcaacct cctctctgcc atcctcatcc aaaagcagat tcaggcgttg tcgtgccgac
     7081 aacggattgt ggtggttgca tttcggacaa acctgattgt tctgctgcaa ctcggtcgaa
     7141 taaacggttg ccgaacaaga cggacatttg tgccacaaac cctcgggaac attggaagaa
     7201 ccgtctttgc tgcggttttt gattttgggt ggcaggattt tatctaacca gctcatggac
     7261 aactcctaaa atatttagaa tgcgtgacag aatcagcgca cggcatcctt caactctttg
     7321 accaaagcac cgacggccgc agcctcgttg cccgcattgt tttcaatctc tttcacaatc
     7381 cggctgccga caatgaccgc gtcggcaacc cggccgattt tgcgcgcgct ttccgcattg
     7441 ctgatgccga aaccgacacc gatgggaata tcgatatact gatgcaaata ctctatttta
     7501 cgcgaaacct catccgtatc caaacttgcc gcgcccgtta cgcccttgag cgaaacataa
     7561 tagacaaatc cgcctgccag ctcggcaatg gttttaatac ggtcttccgt cgtcgtcggc
     7621 gcaatcagga aaatacagtc gaccccgtta tccttcagct cgcgatagag cggatcgatg
     7681 gtttcgacag gggaatccac cgtcaacacg ccgtccacac ccgccattgc ggcttcctga
     7741 gcaaactccc gataacccat cttatgtaca gggttcaaat atcccatcaa aacaaccggc
     7801 gtttgcgtgt cggtttcacg gaattttctg acgacatcca agacatcgcg cagcgaaatc
     7861 ccgtttgcca acgcccgctc cgccgcacgc tgaataaccg gtccatccgc catcggatcg
     7921 gaaaacggca cgcccaactc caaaatatcc gcaccgtttg caaccatgcc gtgcatcaat
     7981 gccaaagttg tccgaatatc ggggtcgccc accgtaatat agggaatcaa tgcctttccg
     8041 ccatccaaag cggcaaaagc ctgccggatt ctgctcattt gtctcttcca tcctatcggc
     8101 aaatatgcca taaaacacaa tcagtaaatt tttcccagta taacatttgc ggtacggata
     8161 ggcgaatacg gcaaacagaa accacgcaaa tcagagccgc cgtttgaacg aggcggaaat
     8221 aaacggcaag catctcggat tatagtggat taacaaaaat caggacaagg cggcgaagcc
     8281 gcagacagta caaatagtac ggagccgatt cacttggtgc tccagcacct tagagaatcg
     8341 ttctctttga gctaaggcga ggcaacgccg tactggtttt tgttaatcca ctataacaaa
     8401 attcagaatc aagacagggc aataccatac tggttttgca ccaacccgct ataaaattgc
     8461 ataaaaaaaa tagacgctgt aaaacacagc gtctattttt tatctggcgg agtaagaggg
     8521 attcgaaccc tcgatgcagg ttgaccccac atgcttcctt agcagggaag tgccttcagc
     8581 ctctcagcca ttactcctaa ggaagctgta actataatca acttttccga taccgtcaag
     8641 gaaaaatgga aagcaaatat taatcttttg aaataaaata agatttaccc tgattatacc
     8701 caatcaggca cttcttttct tcctgaatgg aaatattcct gactgccaca tcctcaagca
     8761 aaatgctttt gtgcatcctg tttgatttcc tgaaaccacg cgtcttcagg aaaacgtgca
     8821 agcgcggcat ccaatgttga cagtaggttt tgcgacaggg ctttggtcag gtattcctcc
     8881 tcgttggctt ctgccgcttt gtcgggctgt tgtgccaaac cgtcggcacg ggctttgtgt
     8941 ccgtgtgcca aatatagtgg attaacaaaa atcaggacaa ggcgacgaag ccgcagacag
     9001 tacagatagt acgacaaggc gaggcaacgc cgtactggtt taaatttaat ccactataat
     9061 tgagcgcggt aattttttgc gcccaaagct gcggtatgtc gggattgtct tcaatcatga
     9121 cggaaaggat ggatacggcg gtcgccagcc tgccgccgtt cattctaagg tcgagggaac
     9181 ggttgggcgg cagggtgctg agtgtttctg ccattctgaa ccaaaattcg ccactggctt
     9241 cgtcgggtgc gttcaatttg agcatttcat agtgaacctc ctgatcatcg ttttgcacga
     9301 gaccccatac ttcagcaagg attttctgtt cttcccggct caagtgttgc catttttcaa
     9361 tatgttgctg catatctttt ccctttgaat ctattttata tagtctgaaa tacagcgcga
     9421 atcctgtcca aatcctcctg cgtatctacg ccggcggcag gagcttcttt ggcggtttcg
     9481 acggcaatcg ggtagccgtg ccacaggacg cgcagttgct ccagcgattc aatggtttcc
     9541 agcggcgaaa cgctcatttc ggtgtagcgt tgcaggaagc cgacgcggta ggcgtagatg
     9601 ccgatatggc gcaggacggc ggtttcaaac ggcatttcgc gttttccggc acgcattgca
     9661 tcgcgcagat agggaatcgg ggcgcggctg aagtagatgg cgttgcggtt tttgtcgagg
     9721 acgactttga cggcattggg attcatcaat tcgtcgaaat cgtgcaattc gtgggcggcg
     9781 gtcgccattt ggacgttgtt ttcgacgagt acttcggcgg tgcggtcgat gagttcgggg
     9841 gcaatcagcg gctcgtcgcc ctgtacgttg acaacgacca gatgttgcgg cagcttcagc
     9901 gcggcggcag cttcagcaag gcgcgtcgtg ccgctttcgt gccggtttga agtcatgacg
     9961 acttcgacgc cgtgcgcctg acagaccgtc tgaatatcgg gatggtcggt ggcaacaacg
    10021 acgcgcgcag ctttactttt tgccgcctgt tcggcaacgc gcacgaccat cggtttgccg
    10081 tggatgtccg ccaaggcttt tccgggcagg cgcgacgaat ccagccgcgc cggaatcaat
    10141 acgacgaatt cggtcatgct ttgagttcct cttcgctcaa cgttcgcgct tcgttttcca
    10201 gcatataggg aatgccgtct ttaatcggat aggcaagctt cgcctgacgg ctccacaatt
    10261 cctgtttgtc ctgatgatat tccagcctgc ctttggtaac ggggcagacg aggatgtcta
    10321 agaatttttt ttccataggg ttgctttcgg gtttgatggt tcaatcaatc ggatgccctc
    10381 ttcaatattt cagacggcta tcatttattt ctgatgcctt ttcccaacct gtccggcttg
    10441 tttacagccc gcatcgggat ttttaccgcc gcagatgatg cgccgcaact cttccgtaaa
    10501 cgcgggcaga tgatgtcgcg cgattttccc tgacaatgca gtccaagata ctgctatttc
    10561 actcatcgat ttcttgatta agcgcggatt tttggcaacg acggactgac cgacaggcga
    10621 accgtaaaag gcaatcatgc cgtcaatttc ttcttgcgtg tatatctcac gggcattctt
    10681 caataaagta ttgcggacag cctgtttcac ttcgggcgta atcaaatctt tcaaaacatt
    10741 ctcacgatag cggttaaagg cttttgccgc ctgatctttt ttcgcttccg gcatttcggc
    10801 aagggctttg tccgcatacg gtttaaatcc ggcattaaag ccctcaatca tatttttttc
    10861 tatatcccgg tcaaaattct gcgtatccag ccaacgcgcc aacgacgcgt cgctgggcgg
    10921 ggcggcaaaa gcgttggtgc acaatgccag cgtggcgaag ggcaataaca aggttttcag
    10981 tttaatattc aatcctttaa cgaatgatta atgcagataa aaaatacgac cgattttctc
    11041 attcctgtcc aagtggaaat ccggagattt gggatttctg aagcctccta ggcattcctg
    11101 aaaattcgag acttagattc ccgcctgcgc gggaatgacg gcgcgaggcg ttcttattca
    11161 aatccgtaat cactccgccc aaaccgtgct ttcagacggc cttcggtaca tcttccaacc
    11221 gctccaacac aaacgccgcc aaatcaggtt cgattatcgc acaaacgggc aacacccaaa
    11281 cattatcggt gcaaatgccg tctgaaaatt tgaccgcatc tttctccgta ataatgaccg
    11341 cgtccgcatc gggcaaatct gccgccgaaa tgtcggcgtg gtcgggcagc gcgacggttc
    11401 gcttcacggt aatgcccata ttccgcaacg aatcgaaaaa acgcgccggc ttggcaatac
    11461 ctgccacggc gacgacggtt tgatttttca gacggcctgt gtccagtatt tcggacggat
    11521 tgttcaaacg gtaaattcgt cccgcttcga tacggctgtg aaacatattt tcagacggcc
    11581 taaacagcgc atccgccttg ccgccgctga cgacgaccgt atccaccgaa tccagccgcg
    11641 acaaaggttc gcgcaaattg ccgttgggca gcaaatccaa atccgtgcgc cccgtatccg
    11701 ccgccggaaa caccgcgatt tccacatctc gccgcagggc gtaatgctgc aaaccgtcgt
    11761 ccgccacaat cagtccgatg tcgggatgcg ccgccagcaa cgccctgcct gcctctgcac
    11821 ggctgctgcc caccgccgtc ggcgcaccgg ttttgctgaa cagcagcaaa ggctcgtcgc
    11881 ccgcatcttc cgcacggctc gcggcattca atacatgaac cgccttgctc ttgcgcccgt
    11941 agcctcggct gatgatgccg accttgacac ctttttcctg caaacccgac accagcgcgg
    12001 cggcaatcgg cgttttcccc gtcccgcccg cgtggatgtt gccgaccacg accacaggca
    12061 cgggcagctt ttcgctttgc cgttttcccg ataaaaaatc cgtccgccgt tttgccgcaa
    12121 ttttggcaaa cagcccggag agcggcttaa gcagaaaaga caaaaccgga taaggttttt
    12181 gccaatgccg ttcgataacg gtatgaaatt tgaaacaatt cggcatattc gatacaaatc
    12241 ctcgaagcaa aatcagcccg gggcattaat catgcgtacc cgatacagac ccacctataa
    12301 acaacgcgaa gaccaaaccg ataagcgaac caatcaggta aataagcaac tgcgctttac
    12361 agaaattggc gcggttcggg ttgcctctgc cgaacaccca aacaaaaatt gaccaaagga
    12421 atcatgaaaa caatcatcgt caacacccac tgccctgtcg tcatgacagg ggcggtttgt
    12481 tttgaagtct cgggcatatc gccgatatga taacggacag tctccatctc tttcattttc
    12541 cagtatcttt catttatcaa tctgacagca aaatgccgcc tgaaaacagt tcagacggca
    12601 ttttaaaccg caaacggctt acagcttcca ttcgcccagc ttggcggcgt aggcttcaaa
    12661 gtcggcaatc ggacgggttg ccacgccgct ttccatcgct gctttggcgg cagccgtagc
    12721 aacgcgcggc agcaggcggg aatcgaacgg agtcggaatc aggtattccg cgccgaattc
    12781 aaatttctta ccgtaagcgg caaccacttc ttcggttact tcttccatcg ccaaatccgc
    12841 caaagcatac acgcaggagc gtttcatttc ttcgttgatg gtcgtcgcgc cgacatccaa
    12901 cgcgccacgg aagatgaatg ggaagcacaa tacgttgttc acttggttcg ggaagtcgga
    12961 acggccggta ccgataacca cgtccggacg ggtttctttt gccagcggcg gcaggatttc
    13021 cggattcggg ttggccatgg cgaacacgat gggtttttcg ttcatcgtgt tcaacatttc
    13081 gggggtcagc aggttcgcgc cggagaggcc caagaagatg tctttacctt tgacggcatc
    13141 gacaagtacg cgctggccat tgtcttcaac ggcgtagaat tttttggatt cgtccatgcg
    13201 atctttgtct tcgcgggttt ggtaaatcac gcctttggag tcgcaaacgg tcacgttttc
    13261 gcgtttcaag cccaaatcca gcaattggtt caagcaggca atcgcggccg cacctgcgcc
    13321 ggaacacacc aaagtcgctt cttcgatttt acggccggta aaacgcaggg cgttcaatac
    13381 ggcagcggcg gtaatgatgg ccgtgccgtg ctggtcgtcg tggaatacgg ggattttgca
    13441 gcgtttgcgt aattcgcgtt cgatgtagaa acactcgggt gctttgatgt cttcgaggtt
    13501 gatgccgccg aaggtcggct ctaaagcggc gatgatgtcc acgagttttt gcgggtcttt
    13561 ttcatcgatt tcgatgtcga acacgtccac accggcgaat tttttgaaca atacgccttt
    13621 accttccatc acgggtttgc ccgccagcgc gccgatgtcg cccaagccca aaacggccgt
    13681 accgttggaa atgacggcga ccaagttgcc tttggcggtg tatttgtagg cattttgcgg
    13741 atcggcatgg atttccatac aaggagcggc tacgcccgga gagtacgcca acgccaggtc
    13801 tttagacgtg gccagagatt tggtcggggt aacggagatt ttgcccggaa cgggtaattc
    13861 gtggaacttg agggcggctt ctttcaatga gttttccatg tgtcaatcct gttgcgagaa
    13921 aaagatttga atcggactgt ccgaaacgct ttcgggtcat catgttacgg gcggttcgtt
    13981 aatattgccg acgcatcctg ccttgtaacc gagcgtaatt ctatcatgcc gaaagtttgg
    14041 cgcataccgc cattttcacc tgcggcactg ccgtttgatt ttcggcgcgg gtggatgcgc
    14101 ttgtttcaat atttgccgca ttaacagccg aaatgtccgt ccaacacttt ttctatgttg
    14161 tttctgactt catccaagct gcggttactg tcgataatgg cgtaccgttc gggacaggcg
    14221 gcggcacggt tcagataaac gctgcgcaca cgcatgaaga aatctgcctg ttcctgctcg
    14281 aaccggtctt tctcgcgcga ctgtccgata cgcgccatcg acacttccag cggcacatcc
    14341 aacagcaggg tcaaatcggg gcgcaaaccg ccctgcaccc aatgttccaa aatttcaatg
    14401 tcttcagacg gcatcccccg cccgccgccc tgataggcga aggttgcgtc ggtaaaacgg
    14461 tcggacacga catggatgcc gtctgaaagt gcaggcaata tcacgtcttc aatatgctgc
    14521 attctggcgg cgaacatcat cagtgtttcc gcacgcaaac cggctttggt ttcagggttg
    14581 agcaggattt cgcgcaaggc ctcaccgacc ggcgttccgc ccggttcgcg cgtgaacagc
    14641 acgggcagcc ccctccgttc aaaccatgcc ttgatgacgg caaggttggt ggatttgccg
    14701 gcaccgtcta tgccgtccaa agtgatgaat tgcggtttca tgcttgcagt tccggtaagg
    14761 gtatgccgtc cgaaaacaca aacttttcag acggcatggt ttattttttc aaaatatatt
    14821 tgcgaacggc ggcgttgtgt tcggtcaaat catggctgaa ctggctcaag cccgtaccgt
    14881 ccattttgga cacgaaatac aggtattttt caccggacgg atgggcggcg gcatcgagtg
    14941 ccgccttgcc gggcagcgcg atcggggttg gcggcagacc gccgcgcgtg taggtgttgt
    15001 acggcgtgtc gcggcgcagg tcggctttac ggattttgcc cttgtatgcc gcacccatgc
    15061 cgtaaatcac ggacgggtcg gtttgcaggc gcataccgat tttcaggcgg ttgacgaaga
    15121 cggaagcgac atggtcgcgg tcggcttcat gccctgtttc cttttcgatc aggctcgcca
    15181 taatcagcat ttcataaggg tttttataag gcagcccgtc ctgcctgctt tcccatgcct
    15241 cattcagtcg gcgttgcatc gccttgtagg cgatttggta aatccgtaaa tcgctgccgc
    15301 ccgcatcgat ttcgtagctg tcggggaaaa actgcccttc aggattgccg ctgaaggcat
    15361 caggggcaac ttccgccatc agtttttcat tgctccagcc tttggtgtcg tgttcgatgt
    15421 cgggcgttgc gtcgatgact ttcctcatat gcgaaaaacg cgaaccttcg ataatctgca
    15481 cggtaacgga atccggcctg ccgccgcgca ttttctgcaa gatatcccaa gcagacactt
    15541 ccgaaggcag tctgtacgtc cccgtataca gcctgttgtg cacacccaaa acgtaggccg
    15601 ccgccgtcaa aacatgcctg ctgaacacga tgcggtcttc ggcaagtttc ctgccgaccg
    15661 acgaaatacc ctggtttttg gcaattttaa tcctgtatgc cctgccgttg tctttaggga
    15721 cgaaaagcag cgcggcgaaa acggctgccg atacggtcaa aaaaacggca gaccatttca
    15781 acaattttct caacatggta ggattcccag cattcggaat acatcttaaa attcgggcga
    15841 cagtataacc caaattgccc gccggacagg aagaacatca tggacaatca cgccgaagca
    15901 cactggcaaa acggctggct tcaaagcata cgccataccc cgtcgcccaa tttcagcccg
    15961 agggaaacgg gggaaacggt ttccctgatc gtgttgcaca acatttcgct gccgccgttc
    16021 gaatatggta cggatgcggt ggaaaagctg tttgccaacc ggctcgaccc cgacggacat
    16081 ccgttcttca gcctgataca cactttgcgc gtatccagcc attttttaat caaacgcgac
    16141 ggcgaaacgg tacagttcgt ttcctgcgac aatatggcat accatgccgg cgtatcctcg
    16201 tttcgcggac gggaaaaatg caacgcattt tccatcggca tcgaactgga aggctgcgat
    16261 ttcgaaccct ttaccgaagc gcaataccgt tcgctcgaag ccttgttgga cgcaatctgc
    16321 cgccgctacc ccatcacggc ggtaacgggg caccaagaca tcgcgcccgg ccgcaaaacc
    16381 gaccccggtc attttttcga ctggcggcgg atacggggga aagggtttcc cgtggacaga
    16441 aatgccgtct gaaaaccaca gattttagat ggcatttcgg aaaatttccg cttatttcga
    16501 cacactgctg tcagaccctg caattttcgt tataattcaa acgttataac cggccgttcc
    16561 gtcagactgc cggaaacgca agcccgattt aaccgcagta cccgcacttt gcgcatcctg
    16621 catcccgaaa tttaaagtga ttgccatgat ttacatcgta ctgttcctcg ccgccgtcct
    16681 cgccgttgtc gcctacaata tgtatcagga aaaccaatac cgcaaaaaag tgtgcgacca
    16741 gttcggacac tccgacaaag atgccctgct caacagcaaa accagccatg tccgcgacgg
    16801 caaaccgtcc ggcgggtcag tcatgatgcc gaaaccccaa ccggcggtca aaaaaacggc
    16861 aaaaccccaa gaccccgcca tgcgcaacct gcaagaacag gatgccgtct acatcgccaa
    16921 gcagaaacag gcaaaagcct ccccgttcaa aaccgaaatc gaaaccgcct tggaagaaag
    16981 cggcattatc ggcaactccg cccacaccgt ttccgaaccc caaaccggac attccgcacc
    17041 gaaacctgcc gacgcgccgg caaaacctgc acccgttccg caaacacctg caaaaccgct
    17101 gattacgctc aaagaactgt caaaagtcga attaccctgg tttgacgtgc gcttcgactt
    17161 catctcctat atcgcgctga ccgaagccaa agaactgcac gcactgccgc gcctttccaa
    17221 ccgctgccgc taccagattg tcggctgcac catggacgac catttccaga ttgccgaacc
    17281 catcccgggc atccgctatc aggcatttat cgtgggtatt caggcagtca gccgcaacgg
    17341 acttgcctcg caggaagaac tctccgcatt caaccgccag gtggacgcat tcgcacaaag
    17401 catgggcggt cagacgctgc acaccgacct tgccgccttt atcgaagtgg cttccgcact
    17461 ggacgcattc tgcgcgcgcg tcgaccagac catcgccatc catttggttt ccccgaccag
    17521 catcagcggc gtagaactgc gttccgccgt aacgggcgtg ggtttcgtcc tggaagacga
    17581 cggcgcgttc cactataccg acacgtcggg ctcgaccatg ttctccatct gctcgctcaa
    17641 caacgagccg tttaccaatg cccttttgga caaccaatcc tataaaggct tcagtatgct
    17701 gctcgatatt ccgcactctc cggcaggcga aaaaaccttc gacgatttgt ttatggattt
    17761 ggcggtacgc ctgtccggcc agttgaacct gaatctggtc aacgacaaaa tggaagaagt
    17821 ttcaacccaa tggctcaaag acgtacgcac ttatgtattg gctcgtcagt ccgagatgct
    17881 caaagtcggt atcgaaccgg gcggcaaaac cgcattgcgc ctgttctcct aaaatcgaat
    17941 gcaatcaaag cggatatgtc gttacggcat atccgctttt tttcgggtaa aattcagctg
    18001 ttttcaacct atcatttttc agacgacctt tgcccgtttc atcccgtatc agacaaaggt
    18061 cgtctgaaaa ccttctctca tgaatccaaa ctcaaaacat aacactaact ttaccaatct
    18121 tcttaaaccg tctgatagtg atataaaaca atttgccgca caacacatcc gccacctcac
    18181 cgacctgctc aaccgctatg cctacgaata ctacaccctc gacgcgccca gcgtacccga
    18241 tgccgaatac gacaaattat tccgcgagct cgaagcgttg gaattaaacc atcccgagct
    18301 caaactgccc gacagtccga cccagcgcgt cggcggcgag cctttagcgg gatttgccga
    18361 agtgcgccac gaagtgccga tgctgtcgct gaccaacgct ttttccccgc aagatgaaaa
    18421 cggcgtgttc gaccatgccg aaatgtacgc tttcgaccaa cgcgtgcgcg acggtttgga
    18481 cggcggcaaa cccgaatacg ttatcgaacc caaattcgac ggcctcgcca tcagcctgct
    18541 ctaccgcgac ggcgtattgg tacaggcggc aacgcgcggc gacggcacaa cgggcgaaga
    18601 cgttacccaa aacatcaaaa ccgtcgccaa catccccctg cggctgcacg gcgaaaatac
    18661 gcccgaactc atcgaagtac gcggcgaagt actgatgcaa aaagccgatt ttgccgccct
    18721 caataaaaga caagccgaaa acgggcaaaa accctttgcc aatccgcgca acgccgctgc
    18781 cggcagcctg cgccaactcg attcgcgcat cactgcgcaa cgcaaactgc actttttccc
    18841 ctactccgtc gcccgccagc aaggcggttt cgtcgcggaa gaacacatcc aagaactcgc
    18901 ctatttccaa gcactcggct tcagtctgcc aaatggcaat ttcggctgtt tcaaaaatat
    18961 cgacgaagta ttggcgtttt acgaacaaat gcagcaaaaa cgccccgaac tgccctacga
    19021 aatcgacggt atggtggtca aagtcaacag cttggcgcaa cagcgcgaac tcggcttcat
    19081 ctcacgcgcg ccacgctggg cgattgccca caaattccct gccgaagaag ccctgaccat
    19141 tgtcgaagcg attgacgtgc aaatcggcag gacgggcgcg gtaacgccgg ttgcccgatt
    19201 acaacccgta ttcgtcggcg gcgtaaccgt taccaacgcc accctgcaca atcaggacga
    19261 agtttcccga aaagacgtgc gcgtcggcga taccgtcgtc gtgcgccgcg ctggagacgt
    19321 gattcccgaa gtcgtgcgtg tgatttttga acgccgcccg atgcaggaaa ccgccgttgc
    19381 tgtttcagac ggcatcgggc atcggcagga cgatttgttt gccgaaacac cgtccgctaa
    19441 tcaaacccaa tccgttccgc tccacaagcc ctaccgcctg ccgacccatt gccccatctg
    19501 ccgcagcgaa atcgaacgcg aagaaggcga agccgtcgcc cgatgcagcg gcggtatgct
    19561 ttgtcaggca caacgcgcgc aaggcttaat ccacttcgcc tcgcgcaaag ccatggacat
    19621 cgacggcttg ggtgaaaaac aaatcgaaca gcttgtcgcc caagacctcg tccgccactt
    19681 cgccgacctc taccgcctcg atattccgac cctgcaaaaa atgaaagaaa cgacggacaa
    19741 aaccgttgcc gaatcggatc aaacgccgtc tgaaggcagt tcggtcggcg cgtcgggcaa
    19801 acataaaaaa caaccggtca agtgggcgga aaacatcctc gggggcatag aatccggcaa
    19861 aacgcccgaa ctcgcgcgct tcctgttcgc gctcggcatc cgccacgtcg gcgaacgcac
    19921 cgccaaaacg ctggcgcagg cattcggcac attggaacgc gtccgccgcg cccccgaacc
    19981 cgtcctcgcc tgcctgcccg acatcggtac ggtagtggcg cattccattg cccacttctt
    20041 cgcccaagcc gaacagcagg cgatgataga cgaactgctc gccgcaggcg ttgccccgca
    20101 aacccaagcc gttaccatcc cgcccgcccg ccacgccgaa ccgcaacgct ggatcgcccg
    20161 cctgcccgac ttcaaaatta gcgaaaacaa agcccaagcc ttatgggaac tcgctggtaa
    20221 aaacatagaa ggtctacaaa acgacaaagc cctccccgcc gactggcaag catggcgcag
    20281 cgaaccacaa aacgccgccc tactcgaaaa cctgaaaacc ttcttcgcgc aaatgccgtc
    20341 tgaagacgag gcggcgcaag gttcagacgg catcaataaa gccgtagcag gcaaaacctt
    20401 tgtattaacc ggcaccctgc ccacgctcaa acgcgaccaa gcccaatccc taatcgaagc
    20461 cgcaggcggc aaagtttccg gcagcgtgtc caaaaaaacc gactacgtcg tcgccggaga
    20521 agccgcgggc agcaagctgg aaaaagccaa tgccttgggc gtttccgtcc tcagcgaagc
    20581 cgaactgctt accctgctcg gctgaaccta tgccgtctga accgccttca gacggcattg
    20641 tccacttttc cgaaccacac catgcacacc atttcctttc caaaccgcac ccgactcacc
    20701 gccctgccgc ccctgtcgct ttacatccac atcccgtggt gcatcaaaaa atgcccgtat
    20761 tgcgacttta attcccacag cctgaaaaac ggattgcccg aagccgccta tatcgacgcg
    20821 ctgctgaccg acttgcagct cgaattgccc aatatttggg gcaggccggt ggaaacgatc
    20881 tttttcggcg gcggtacgcc cagcctgttt caggcggaat cgattgaccg tttattgagc
    20941 ggcgtgcgtt cgctgttgcg cttgcagccg gaagcggaaa ttaccttgga agccaatccg
    21001 gggacatttg aaatcgagaa gtttcaagga tttaaagacg caggcatcac gcggctttct
    21061 attggtgtac agagtttcaa cgacgatatg ctctcaaggc tggggcgcgt ccacaacggc
    21121 aaggaagcct taaccgctat cgataccgcc ttgaaattat ttgataaagt caatatcgac
    21181 ttgatgtatg ccctgccgaa ccaaaccgtt cagacggcat tggacgacgt acaaaccgct
    21241 atcgctacgg gcgcgaccca catcagcgcg tatcatctga cgatggaacc gaacacgccg
    21301 ttcggtcata cgccgccgaa aggtttgccg caagacgaag ccgccctcga catcgaagac
    21361 gcggtacacg gcgcgctgga aagcgcgggt tttgtccact acgaaacatc ggcttttgcg
    21421 aaaccagcca tgcagtgccg ccacaatttg aactactggc agttcggcga ttatttaggc
    21481 ataggcgcgg gcgcgcacgg caaaatttcc tatcccgacc gcatcgagcg caccgtccgc
    21541 cgccgccacc ccaacgacta cctcgcctta atgcaaaacc gaccgagcga agccgtcgaa
    21601 cgcaaaaccg tcgccgccga agatttgccg tttgagttca tgatgaacgc cctgcgcctg
    21661 accgacggcg tacccgccgc gatgttgcag gaacgcacgg gcgtaccgag tgccaaaatc
    21721 atggcgcaaa tcgaaacagc aaggcaaaaa ggcctgctgg aaaccgaccc cgccgtattc
    21781 cgcccgaccg aaaaaggacg cttgttttta aacgatttgc tgcaatg
//
LOCUS       DAWITQ010000015        21635 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.015, whole genome shotgun sequence.
ACCESSION   DAWITQ010000015 DAWITQ010000000
VERSION     DAWITQ010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21635)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21635)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21635
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.015"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(48..1229)
                     /gene="odhB"
                     /locus_tag="WIX18_000508"
     CDS             complement(48..1229)
                     /gene="odhB"
                     /locus_tag="WIX18_000508"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HEZ5237661.1"
                     /translation="MIIDVKVPMLSESVSEGTLLEWKKKVGEAVARDEILIDIETDKV
                     VLEVPSPQAGVLVEIVAQDGETVVADQVLARIDTAATAAAEAPVAAPAEAAPAAAPAA
                     AQNNAAMPAAAKLAAETGVDVNALQGSGRDGRVLKEDVQNAAAKPAAAAAPAVALPAG
                     ARPEERVPMSRLRARVAERLLASQQENAILTTFNEVNMKPIMDLRAKYKEKFEKEHGV
                     KLGFMSFFVKAAVAALKKYPVVNASVDGKDIVYHGYFDIGIAIGSPRGLVVPILRDAD
                     QMSIADIEQAIVDYAKKAKDGKIAIEDLTGGTFSITNGGTFGSMMSTPIINPPQSAIL
                     GMHATKERAVVENGQVVVRPMMYLALSYDHRIIDGREAVLTLVAIKDALEDPARLLLD
                     L"
     gene            complement(1329..4157)
                     /locus_tag="WIX18_000509"
     CDS             complement(1329..4157)
                     /locus_tag="WIX18_000509"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HEZ5237662.1"
                     /translation="MMDEKLNFSYLFGSNAPYIEELYEAFLENPDAVDEKWKQYFTDL
                     SKQPGTVAVDVAHTPIRESFVTLAKKKIASAVVGGADEAMLKKQVSVLRLISAYRIQG
                     VGAAQLDPLKRIPPRDIEALDPKFHGLSDTDMALQFNMGEGDFANRGKLPLSQIISNL
                     KQTYCGHIALEYIYIPNTEERRWVRNYFESVLSTPHYNADQKRRILKEMTAAETLERY
                     LHTKYVGQKRFGVEGGESAIAGLNYLIQNASKDGVEEVIIGMAHRGRLNVLVNILGKK
                     PGDLFAEFEGRAEIKLPSGDVKYHMGFSSDIATPHGPMHVSLAFNPSHLEIVNPVVEG
                     SARAKQKRLGENGRDKVLPVLIHGDSAFIGLGVNQATFNLSKTRGYTTGGTVHIVINN
                     QIGFTTSDIRDTRSTVHCTDIAKMVSAPVIHVNGDDPERVCFAIQAALDYRKKFHKDI
                     VIDVVCYRKWGHNEGDDPTLTQPMMYKKVSQHPGARALYTEQLIAEGVVTQAEADGYI
                     QAYRDALDKGEHVEQTTLSNFQRTQIDWSKYQGKDWREHIETGLPAADIERLTEKFTA
                     VPEGFALHPTAKRVIEARKAMASGKQAIDWGMAETLAYASLVTKGHGVRISGEDSGRG
                     TFSHRHAVLHDQKREKWDDGTYVPLRHMGEGMGEFLVIDSILNEEAVMAFEYGFACSA
                     PDKLTIWEAQFGDFANGAQVTIDQFLSSGETKWGRLCGLTTILPHGYDGQGPEHSSAR
                     VERWLQLCSENNMQVIMPSEASQMFHLLQRQVLGSYRKPLVIFMSKRLLRFKGAMSPL
                     ENFTEGSTFRPVIGDTAERASNGSVKRVVLCAGQVYYDLEAGRTERKLEDDVAIVRVE
                     QLYPFPYEEVKAELAKYPNAKSVVWAQEEPKNQGAFYQIRHRIEDVISEEQKLSYAGR
                     PSSASPAVGYSSKHIAQLKQLVEDALAL"
     gene            complement(4362..5645)
                     /gene="gltA"
                     /locus_tag="WIX18_000510"
     CDS             complement(4362..5645)
                     /gene="gltA"
                     /locus_tag="WIX18_000510"
                     /EC_number="2.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HEZ5237663.1"
                     /translation="MSKSIKLNVPGQAGLELPVLEASIGHDVVDIRGLTKNTGLFSFD
                     PGFVSTASCESKITYIDGDQGLLYYRGYPIEQLAEKSDYLEVCYLLIYGELPTPEQKA
                     EFDNTVRRHTMVHEQLTWFFRGFRRDAHPMAMMVGVVGALSAFYQDSLDISNPEHRKI
                     AIYRLISKIPTIAAMCYRYSNGLPFNYPKNNLSYSENFLHMMFATPCEDYKPNPVLAR
                     ALDRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGIACLWGASHGGANEAVLKML
                     DEIGDVSNVAAYMEGVKQRKYRLMGFGHRVYRNMDPRASIMRETCYEVLKELGLEDSP
                     KFKLAMELEQIALKDPFFIERKLYPNVDFYSGIVLSALGIPTEMFTVIFALSRSVGWI
                     SHWHEMISDPSLKIGRPRQLYTGSERRDYVPPGER"
     gene            complement(5757..6005)
                     /locus_tag="WIX18_000511"
     CDS             complement(5757..6005)
                     /locus_tag="WIX18_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HEZ5237664.1"
                     /translation="MMVFDDIAKRKIRFQTRRGLLELDLIFGRFMEKEFEHLSDKELS
                     EFSEILEFQDQELLALINGHSETDKGHLIPMLEKIRRA"
     gene            complement(6009..6716)
                     /locus_tag="WIX18_000512"
     CDS             complement(6009..6716)
                     /locus_tag="WIX18_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HEZ5237665.1"
                     /translation="MEKMSFEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA
                     QDDTLSFRRSCREGICGSDGMNINGKNGLACLTDLRGLKQPVKIRPLPGLPVIRDLIV
                     DMTQFFKQYHSVKPYVVNDNPIDADKERLQTQEERKELDGLYECILCACCSTACPSFW
                     WNPDKFVGPSGLLNAYRFIADSRDTITNERLDDLNDPYRLFRCHTIMNCVDVCPKHLN
                     PTRAIGKIKEIMLKRAV"
     gene            complement(6836..8599)
                     /gene="sdhA"
                     /locus_tag="WIX18_000513"
     CDS             complement(6836..8599)
                     /gene="sdhA"
                     /locus_tag="WIX18_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HEZ5237666.1"
                     /translation="MGFPVRKFDAVIVGGGGAGLRAALQLSKSGLNCAVLSKVFPTRS
                     HTVAAQGGISASLGNVQEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHM
                     GMPFDRVESGKIYQRPFGGHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQF
                     FVEWTAQDLIRDENGDVVGVTAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMN
                     TGDGLGICARAGIPLEDMEFWQFHPTGVAGAGVLITEGVRGEGGILLNADGERFMERY
                     APTVKDLASRDVVSRAMAMEIYEGRGCGKNKDHVLLKIDHIGAEKIMEKLPGIREISI
                     QFAGIDPIKDPIPVVPTTHYMMGGIPTNYHGEVVVPQGEDYEVPVKGLYAAGECACAS
                     VHGANRLGTNSLLDLVVFGKAAGDSMIKFIKEQSDWKPLPANAGELTRQRIERLDNQT
                     DGENVDALRRELQRSVQLHAGVFRTDEILSKGVREVMAIAERVKRTEIKDKSKVWNTA
                     RIEALELDNLIEVAKATLVSAEARKESRGAHASDDHPERDDENWMKHTLYHSDTNTLS
                     YKPVHTKPLSVEYIKPAKRVY"
     gene            complement(8602..8943)
                     /gene="sdhD"
                     /locus_tag="WIX18_000514"
     CDS             complement(8602..8943)
                     /gene="sdhD"
                     /locus_tag="WIX18_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HEZ5237667.1"
                     /translation="MVERKLTGAHYGLRDWVMQRATAVIMLIYTVALLVVLFSLPKEY
                     SAWQAFFSQTWVKVFTQVSFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVG
                     CLVYSVKVIWG"
     gene            complement(8937..9314)
                     /gene="sdhC"
                     /locus_tag="WIX18_000515"
     CDS             complement(8937..9314)
                     /gene="sdhC"
                     /locus_tag="WIX18_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HEZ5237668.1"
                     /translation="MSVKPRPVYLDLPNIRLPIPGIVSILHRISGVGLFIMLPFLLYF
                     LSGTLSQESAFETYRAIVSHPLVKLVLIGVLWAYLHHSLAGIRFLFLDAHKGLELNTA
                     RNTAKAVFASALVLTVVLGALLW"
     gene            complement(9597..11000)
                     /locus_tag="WIX18_000516"
     CDS             complement(9597..11000)
                     /locus_tag="WIX18_000516"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEZ5237669.1"
                     /translation="MKKIQADVVVIGGGTAGMGAFRNARLHSNNVYLIENNVFGTTCA
                     RVGCMPSKLLIAAAEARHHALHTDPFGVHLDKDSIVVNGEEVMRRVKSERDRFVGFVV
                     ADVEKWPADKRIMGSAKFIDEHTVQIDDHTQITAKSFVIATGSRPVILPQWQSLGNRL
                     IINDDVFSWDTLPKRVAVFGPGVIGLELGQALHRLGVKVEIFGLGGIIGGISDPVVSD
                     EAKAVFGEELKLHLDAKTEAKLDADGNVEVHWEQDGEKGVFVAEYMLAAVGRRPNVDN
                     IGLENINIDKDARGVPVADPLTMQTSIPHIFIAGDASNQLPLLHEAADQGKIAGDNAG
                     RYPNIGGGLRRSTIGVVFTNPQIGFVGLKYAQVTAQYQPDEFVIGEVSFKNQGRSRVM
                     LVNKGHMRLYAEKATGRFIGAEIVGPAAEHLAHLLAWAHQMKMTVPQMLDMPFYHPVI
                     EEGLRTALRDADAKLKA"
     gene            complement(11254..11991)
                     /locus_tag="WIX18_000517"
     CDS             complement(11254..11991)
                     /locus_tag="WIX18_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin family protein"
                     /protein_id="HEZ5237670.1"
                     /translation="MALQDRTGQKVPSVVFRTRVGDTWKDVSTDDLFKGKKVVVFSLP
                     GAFTPTCSSSHLPRYNELFGAFKENGVDAIYCVSVNDTFVMNAWAAEEESDNIYMIPD
                     GNGEFTEGMGMLVGKEDLGFGKRSWRYSMLVNDGVVEKMFIEPEEPGDPFKVSDADTM
                     LQFVAPDWKAQESVAIFTKPGCQFCAKAKQALQDKGLSYEEIVLGKDATVTSVRAITG
                     KMTAPQVFIGGKYIGGSEDLEAYLAKN"
     gene            complement(12270..14546)
                     /gene="metE"
                     /locus_tag="WIX18_000518"
     CDS             complement(12270..14546)
                     /gene="metE"
                     /locus_tag="WIX18_000518"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEZ5237671.1"
                     /translation="MTTLHFSGFPRVGAFRELKFAQEKYWRKEISEQELLAVAKDLRE
                     KNWKHQAAANADYVAAGDFTFYDHILDLQVATGAIPARFGFDSQNLSLEQFFQLARGN
                     KDQFAIEMTKWFDTNYHYLVPEFHANTEFKANAKHYVQQLQEAQALGLKAKPTVVGPL
                     TFLWVGKEKGAVEFDRLSLLPKLLPVYVEILTALVEAGAEWIQIDEPALAVDLPKEWV
                     EAYKDVYATLNKVSAKILLSTYFGSVAEHAALLKALPVDGLHIDLVRAPEQLDAFADY
                     DKVLSAGVIDGRNIWRANLNKVLETVESLQAKLGDRLWISSSCSLLHTPFDLSVEEKL
                     KANKPDLYSWLAFTLQKTQELRVLKAALNEGRDSVAEELAASQAAADSRANSSEIHRA
                     DVAKRLADLPANADQRKSPFADRIKAQQAWLNLPLLPTTNIGSFPQTTEIRQARAAFK
                     KGELSAADYEAAMKKEIALVVEEQEKLDLDVLVHGEAERNDMVEYFGELLSGFAFTQY
                     GWVQSYGSRCVKPPIIFGDVSRPEAMTVAWSTYAQSLTKRPMKGMLTGPVTILQWSFV
                     RNDIPRSTVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAG
                     ESFRLSSAGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLTAFGEF
                     KYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLE
                     QLQVMMNVTHKLRAELAK"
     gene            complement(14683..15561)
                     /gene="metF"
                     /locus_tag="WIX18_000519"
     CDS             complement(14683..15561)
                     /gene="metF"
                     /locus_tag="WIX18_000519"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HEZ5237672.1"
                     /translation="MNYAKEINALNNSLSDLKGDINVSFEFFPPKNEQMETMLWDSIH
                     RLQTLHPKFVSVTYGANSGERDRTHGIVKRIKQETGLEAAPHLTGIDASPDELRQIAK
                     DYWDSGIRRIVALRGDEPPGYEKKPFYAEDLVKLLRSVADFDISVAAYPEVHPEAKSA
                     QADLINLKRKIDAGANHVITQFFFDVERYLRFRDRCVMLGIDVEIVPGILPVTNFKQL
                     GKMAQVTNVKIPSWLSQMYEGLDDDQGTRNLVAASIAIDMVKVLSREGVKDFHFYTLN
                     RSELTYAICHILGVRP"
     gene            15762..16037
                     /locus_tag="WIX18_000520"
     CDS             15762..16037
                     /locus_tag="WIX18_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HEZ5237673.1"
                     /translation="MKPNIHPDNYRTVLFFDSSANEGWLIRSCAETHGKTMVWTDGKE
                     YPLFSLDTSSASHPVYTGKQRNVNTEGRASKFNQRFQSVMSSFRKDK"
     gene            16037..16162
                     /gene="ykgO"
                     /locus_tag="WIX18_000521"
     CDS             16037..16162
                     /gene="ykgO"
                     /locus_tag="WIX18_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HEZ5237674.1"
                     /translation="MQVLSSLKTAKQRHRDCQIVRRRGKVYVICKSNPRFKARQR"
     gene            complement(16270..16470)
                     /locus_tag="WIX18_000522"
     CDS             complement(16270..16470)
                     /locus_tag="WIX18_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237675.1"
                     /translation="MIGRLFRIFFFFALAALIINRLFSRKQKRALRDVAKISAWVLLG
                     AAAATLFWYLFMLYFKHIPDSY"
     gene            16628..17767
                     /locus_tag="WIX18_000523"
     CDS             16628..17767
                     /locus_tag="WIX18_000523"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HEZ5237676.1"
                     /translation="MSQNASVGIVTPQKIPFEIPLVLENGKTLPRFDLMIETYGELNA
                     EKNNAVLICHALSGNHHVAGKHSAEDKYTGWWDNMVGPGKPIDTERFFVVGLNNLGGC
                     DGSSGPLSINPETGREYGADFPVVTVKDWVKSQAALTDYLGIGQWAAVVGGSLGGMQA
                     LQWAISYPERVRHALVIASAPKLSTQNIAFNDVARQAILTDPDFNEGHYRSRNTVPAR
                     GLRIARMMGHITYLAEDGLGKKFGRDLRSNGYQYGFGVEFEVESYLRYQGDKFVGRFD
                     ANTYLLMTKALDYFDPAADFGNSLTRAVQDVQAKFFVASFSTDWRFAPERSHELVKAL
                     IAAQKSVQYIEVKSAHGHDAFLMEDEAYMRAVAAYMNNVYKECQQ"
     gene            17764..18345
                     /gene="metW"
                     /locus_tag="WIX18_000524"
     CDS             17764..18345
                     /gene="metW"
                     /locus_tag="WIX18_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HEZ5237677.1"
                     /translation="MNLRDDLQLIYDRIPEGSRVLDLGCGDGELLAALVEHKKCSGYG
                     IEIDTDSVIAAMSRGVNVIQADLEEGLTAFNDQSFDVIVLSQTIQAMQNTEKILRCLI
                     RVAKQAIVSFPNFGYWRNRVQIALGGHMPVSERMPYHWYDTPNIHWCTLKDFDLLCAK
                     NNIRVLERAVMTGNRQVKHFPNLLGSLAFYRVG"
     gene            18462..19307
                     /locus_tag="WIX18_000525"
     CDS             18462..19307
                     /locus_tag="WIX18_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="d-alanine-poly(phosphoribitol) ligase"
                     /protein_id="HEZ5237678.1"
                     /translation="MKNKTSSLLLWLAAIMLTACSPSKDDKTKEVDASAASSPASAAS
                     SSASQSDLQPAASAPDNVKQAESAPPSNCTGLHPASGIDDLMQQIAEHIDSDCLFALS
                     HHELETRFGLPGGGYDNIQRLLFPDIRPEDPDYHQKIILAIEDLRYGKRTISRQAQDA
                     LMEQERRLREATLLLIQGSQETRGQGEEPKRTRYFEVSATPAYSSRHNNGLGGNFQYI
                     GQLPGYLKIHGEMLENQSLFRLSNRERNPDKPFLDIHFDENGKITRIVVYEKNIYFNP
                     NLGRR"
     gene            complement(19357..19917)
                     /gene="efp"
                     /locus_tag="WIX18_000526"
     CDS             complement(19357..19917)
                     /gene="efp"
                     /locus_tag="WIX18_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEZ5237679.1"
                     /translation="MKTAQELRAGNVFMVGNDPMVVQKTEYIKGGRSSAKVSMKLKNL
                     LTGAASETIYKADDKFDVVILSRKNCTYSYFADPMYVFMDEEFNQYEIEADNIGDALK
                     FIVDGMEDQCEVTFYEGNPISVELPTIIVREVEYTEPAVKGDTSGKVMKTARLVGGTE
                     IQVMSYIENGDKIEIDTRTGEFRKRA"
     gene            complement(19960..21108)
                     /gene="earP"
                     /locus_tag="WIX18_000527"
     CDS             complement(19960..21108)
                     /gene="earP"
                     /locus_tag="WIX18_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P maturation arginine
                     rhamnosyltransferase EarP"
                     /protein_id="HEZ5237680.1"
                     /translation="MNTPPFVCWIFCKVIDNFGDIGVSWRLARVLHRELGWQVHLWTD
                     DVSALRALCPDLPDVPCVHQDIHVRTWHSDAADIDTALVPDIVIETFACDLPENVLHI
                     IRRHKPLWLNWEYLSAEESNERLHLMPSLQESVQKYFWFMGFSEKSGGLIRERDYRNA
                     VRFDTEALRERLMLPEKNAPEWLLFGYRSDVWAKWLEMWRQAGSPMTLLLAGTQIIDS
                     LKQSGVIPQDALQNDGDVFQTASVRLVKIPFVPQQDFDKLLHLADCAVIRGEDSFVRA
                     QLAGKPFFWHIYPQDENVHLDKLHAFWDKAHGFYSPETASVHRRLSDDLNGGEALSAT
                     QRLECWQTLQQHQNDWRQGAEDWSRYLFEQPSAPEKLAAFVSKHQKIR"
     gene            complement(21127..21405)
                     /locus_tag="WIX18_000528"
     CDS             complement(21127..21405)
                     /locus_tag="WIX18_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237681.1"
                     /translation="MSRNLLVRWLVVCLIPLATLAVFAANPPEDKPQHLINGIILACE
                     ATFLFKFVLFDTIKHHLKQEFDLKRQTMLLFIPIILLIVYLFHYFGAF"
BASE COUNT         5322 a         5467 c         5483 g         5363 t
ORIGIN      
        1 aattcagacg gccttttcat taacaaataa aaggccgtct gaaacgatta cagatccaac
       61 aacaggcggg ctgggtcttc caacgcgtct ttaatggcta ccaaggtcaa tacagcttcg
      121 cggccgtcaa tgatacggtg gtcgtaagac agagccagat acatcattgg acggacaaca
      181 acttgaccgt tttcaaccac agcgcgctct ttagtggcgt gcatacccaa aattgcagat
      241 tgaggcgggt tgatgatcgg ggtagacatc atagaaccga aagtaccgcc gttggtaata
      301 ctgaatgtac cgccggtcag atcttcgata gcgattttgc cgtctttggc ttttttcgcg
      361 taatcaacaa ttgcttgttc gatgtctgca atgctcattt ggtcggcatc gcgcaggatt
      421 ggcacaacca aaccgcgtgg gctgccaatc gcgataccga tgtcgaagta gccgtggtaa
      481 acgatgtctt tgccgtcaac agaagcattc acaaccgggt attttttcag ggcggcaaca
      541 gcggctttaa cgaagaagga cataaagccc aatttcacgc cgtgttcttt ctcaaatttt
      601 tctttgtact tcgcacgcaa gtccatgata ggtttcatgt tgacttcgtt gaatgtagtc
      661 agaatggcgt tttcttgttg agaagccaag aggcgttctg caacacgggc acgcaggcgg
      721 ctcattggta cgcgttcttc aggacgtgcg ccggcaggaa gtgcaacagc aggagcagcg
      781 gctgcggcag gtttggcagc ggcattttgt acgtcttctt tcaatacgcg accgtcgcgg
      841 ccggaacctt gcaatgcgtt cacgtcaaca ccggtctccg cagccagttt ggcggcggca
      901 ggcatagcgg cgttgttttg tgcggcagca ggagcggcag ccggggcggc ttcggcagga
      961 gcggctacgg gtgcttcggc agcggcagta gcagctgtat cgatgcgtgc caaaacttgg
     1021 tcggcaacaa cggtttcacc gtcttgcgct acgatttcaa ccaatacgcc ggcttgtggg
     1081 gaagggactt ccaaaaccac tttgtccgtt tcgatatcga tcaggatttc gtcacgggca
     1141 actgcttcgc caactttttt cttccattcc aagagcgtgc cttcagatac gctttcagac
     1201 agcataggta cttttacatc aataatcatt ttgtgtctcc aatggccctt tcagacggcc
     1261 tgttgtgtgt ttttcattct gcatatgggc attccgcctg agcagcctca gacggaatgc
     1321 cacttggctt acaacgccaa agcgtcttca accaattgtt tcaattgggc aatatgtttg
     1381 cttgagtagc ccactgcagg cgatgcgctg cttggacgac cggcataaga cagtttttgc
     1441 tcttcgctga taacgtcttc gatgcggtgg cggatttggt agaacgcacc ttggtttttc
     1501 ggctcttctt gtgcccaaac cacagatttt gcgttcggat atttcgccag ttcggcttta
     1561 acctcctcgt atgggaacgg atacagctgc tcaacgcgga caatcgcaac atcatcttcc
     1621 agtttacgct cggtacggcc tgcttccaag tcatagtaaa cctgaccggc acacaatacc
     1681 acacgtttca cgctgccgtt gcttgcgcgt tcggcggtat caccgataac cggacggaaa
     1741 gtcgaacctt cggtgaagtt ttccagcggg ctcattgcac ctttgaagcg caacaggcgt
     1801 ttggacatga aaatcaccag cggtttgcgg tatgaaccca aaacttggcg ttgcaagagg
     1861 tggaacattt gcgacgcttc agacggcatg atgacttgca tattgttctc ggaacacagt
     1921 tgcaaccaac gttctacgcg tgcagaggag tgctcggggc cttgaccgtc gtagccgtgc
     1981 ggcaggatgg tggtcagacc gcacaaacga ccccatttgg tttcgcctga agacaggaat
     2041 tggtcaatag tcacttgcgc gccgttggcg aagtcaccga attgagcctc ccaaatggtc
     2101 agcttgtcag gcgcggagca ggcaaagccg tactcgaacg ccatcacggc ttcttcgttc
     2161 aaaatggagt cgataaccag gaactcgccc ataccttcgc ccatatggcg cagagggaca
     2221 taagtaccgt cgtcccattt ttcgcgtttt tgatcgtgca ataccgcatg acggtgtgag
     2281 aatgtaccgc gcccagagtc ctcgccggaa atacgcacgc catggccttt ggttacgagg
     2341 ctggcgtatg cgagggtttc cgccataccc cagtcgatgg cttgtttgcc ggatgccatg
     2401 gctttacgcg cttcaatcac acgttttgca gtcggatgca gggcaaagcc ttccggtacg
     2461 gcggtaaact tctcagtgag acgctcaata tctgcggcag gcaaaccggt ttcgatgtgt
     2521 tcgcgccaat ctttgccttg gtatttgctc cagtcgattt gcgtgcgttg aaagttgctc
     2581 aacgttgttt gctcgacgtg ttcgcctttg tccaaagcat cacggtaggc ttggatgtaa
     2641 ccgtctgcct cggcttgggt taccacgcct tcggcaatca gttgctcggt gtacaaagca
     2701 cgcgcaccgg ggtgttgcga tacttttttg tacatcatcg gttgggtcaa ggtcggatca
     2761 tcgccctcgt tgtgacccca tttacggtag cagacaacgt caatcacgat gtctttatgg
     2821 aattttttgc ggtaatccaa agcggcttgg atggcaaagc aaacacgctc aggatcatcg
     2881 ccgttcacat ggataaccgg agcggaaacc atttttgcga tatcggtaca gtgtacggtt
     2941 gaacgggtat cgcggatatc ggaagtggta aagccgattt ggttgttgat gacgatatga
     3001 accgtaccgc cggtggtata accgcgcgtt ttagacaggt tgaatgtcgc ttggttgact
     3061 cccagaccga taaatgcgga gtcgccgtga atcaataccg gcaagacttt gtcgcggccg
     3121 ttttcgccca aacgtttttg tttggcgcgc gcagaacctt ccaccaccgg gttgacgatt
     3181 tctaagtgag acgggttgaa cgccaaagaa acatgcatcg ggccgtgcgg ggtagcaata
     3241 tcggagctga agcccatatg gtatttcacg tcgccgctgg gcagtttgat ttcggcacga
     3301 ccttcaaatt cggcaaacaa atcgccgggt tttttgccca aaatgttcac caaaacattc
     3361 agacggccac ggtgcgccat accgatgatg acttcttcca cgccgtcttt actggcgttt
     3421 tgaatcaggt agttcaaacc ggcaatcgcg ctttcgccgc cttcgacacc gaaacgtttc
     3481 tgaccgacat atttggtatg cagataacgt tccaaagttt cggcagcagt catctctttc
     3541 aagatacggc gtttttgatc ggcattgtaa tgcggtgtgg acaatacgct ttcaaaataa
     3601 ttgcgtaccc agcggcgctc ttcggtattg ggaatataga tatattccaa tgcgatgtgg
     3661 ccgcagtagg tttgtttgag gttgctgatg atttgggaca aaggcagttt gccgcgattg
     3721 gcaaaatcgc cctcgcccat attgaattga agcgccatat cggtatctga cagaccgtgg
     3781 aatttcggat cgagggcttc aatatcgcgc ggggggatac gtttgagcgg atcaagttgg
     3841 gctgcaccca cgccttggat acgataggcg gaaatcagcc gtaaaacgct gacttgcttt
     3901 ttcagcattg cctcatccgc accgcccaca acggcagatg caattttctt tttcgccaaa
     3961 gtaacaaatg attcgcgaat cggtgtgtgt gcgacatcga cagcaaccgt ccccggctgt
     4021 ttgctcaaat cggtgaaata ctgcttccat ttttcatcaa ccgcatcggg gttttccaaa
     4081 aaagcctcgt acaattcctc aatgtagggt gcgttcgaac cgaacaggta agagaaattg
     4141 agtttttcgt ccatcatggc gtgcgctctt ttctttaaaa tataaacaaa gggtagaagt
     4201 ccgcgtcctg acggctaaac tgatgccgtc tgaaaagaca ttttattcta ccctatttta
     4261 aaccggattg cttgtattga tttcatccga ctacaatcag acggattcgg gaaacaatcc
     4321 ggttctctga tattgcctgt ttgacaatat attaatgtat gttacctctc gcctggcggc
     4381 acataatcgc ggcgttccga accggtataa agctggcgcg ggcggccgat tttcagcgaa
     4441 ggatcgctaa tcatctcgtg ccagtgcgaa atccagccca cgctgcgcga cagggcgaag
     4501 atgacggtaa acatttcggt cgggatgccc agcgcggaca ggacgatgcc ggaatagaaa
     4561 tcgacgtttg gatacagttt gcgttcgata aagaacgggt ctttcagcgc aatctgttcc
     4621 aattccatcg ccagtttgaa tttcggactg tcttccaagc ccaattcctt caaaacttca
     4681 tagcaggttt cgcgcataat gctggcacgc ggatccatat tgcggtacac gcggtgaccg
     4741 aagcccatca gacggtattt gcgttgtttc acaccttcca tgtatgcggc aacattagac
     4801 acatcgccga tttcgtccaa cattttcaac acggcttcgt tcgcaccgcc gtgcgaagca
     4861 ccccacaggc aggcgatacc ggcagcaata caggcaaacg ggttcgcacc cgaagaccct
     4921 gccagacgga cggttgaagt tgaggcgttt tgctcgtggt cggcatgcaa aataaagatg
     4981 cggtcgagcg cgcgtgccaa aacgggattg ggtttgtagt cttcacacgg cgtggcgaac
     5041 atcatatgaa ggaagttttc ggaataagaa agattattct tcggataatt gaacggcaga
     5101 ccgtttgaat agcggtagca cattgccgca atggtcggga ttttggaaat caggcggtaa
     5161 atcgcgattt tgcggtgttc gggattgcta atgtccaagc tgtcttggta gaacgcagac
     5221 agcgcgccga ccacgccgac catcatcgcc atcggatgcg cgtcgcggcg gaacccccgg
     5281 aagaaccaag tcagctgttc atgcaccatc gtgtggcggc ggacggtatt gtcaaattct
     5341 gccttttgct cgggagtcgg cagttcgccg taaatcaaca ggtagcagac ttccaaataa
     5401 tcggattttt cggccagctg ctcgatgggg tatccgcgat aataaagcaa gccttgatcg
     5461 ccgtcgatgt aagtaatttt agactcacag cttgcggttg aaacaaatcc ggggtcgaag
     5521 gaaaacaaac ctgtattttt tgtcagcccc cgaatgtcaa ccacatcgtg cccgatgctg
     5581 gcttccaata ccggcagctc caaacctgcc tgacccggta cgttgagttt gattgatttg
     5641 gacatattat tgctcctttg caagttataa cccacgttac tgcatccgca gcacgttctt
     5701 tgccttcaga cggcttttgc attttgaaat ctgcctgcag gcagatttca gatgcctcat
     5761 gcccgtctga ttttttcaag catcgggata aggtgccctt tgtccgtttc cgaatgcccg
     5821 ttaatcaagg caagcaattc ttgatcttga aattcaagga tttcggaaaa ctcggacagc
     5881 tctttatcgc tcaaatgctc gaattctttt tccataaacc tgccgaagat taaatctaat
     5941 tccaacaatc cccggcgggt ttgaaaacgg attttccgtt tggcaatatc gtcaaaaacc
     6001 atcatttctt aaacggcccg cttcaacata atctctttaa tcttaccgat ggctcgggtc
     6061 ggattcaagt gtttggggca tacgtccaca cagttcataa tggtgtggca gcggaacaaa
     6121 cggtatgggt cgttcagatc atccaaacgc tcattagtga tggtatcacg gctgtccgca
     6181 atgaaacggt aagcattcag caaaccggac ggaccgacga atttatcagg gttccaccaa
     6241 aatgacgggc aggcagtcga acagcaggcg cacaaaatac actcgtacaa accgtccaac
     6301 tctttacgct cttcctgagt ttgcagacgc tctttgtccg catcaatcgg attatcgttg
     6361 acaacataag gtttgacgga atggtattgt ttgaagaact gggtcatatc cacaatcagg
     6421 tcgcggataa caggcagacc tggcagagga cgaattttaa ccggctgttt caagccacgc
     6481 agatcggtca gacacgccaa accgtttttg ccgttgatgt tcataccgtc cgatccgcaa
     6541 atgccttcgc ggcaggaacg gcggaaagac aatgtatcat cttgtgcttt caggcgcact
     6601 aaagcgtcca aaagtttaac gtcggttggt tccaattcca actcgtaacg ctgcatataa
     6661 ggtttggcat caacgtccgg gttgtaacgg taaatttcaa aactcatttt ttccatgaga
     6721 agtgttcctt ttctcataaa ctgcccaatg attttgtatt atgaattcaa gcagttcaat
     6781 gtgggtatgg ttagatttca gacgaccttt gaggcgaaga ccgtctgaaa acgcatcaat
     6841 aaacgcgctt ggccggtttg atgtattcca cgctcaaggg cttggtatgc accggtttgt
     6901 aagacaaggt attggtatct gaatggtaca gcgtatgttt catccagttt tcatcatcgc
     6961 gctcaggatg gtcgtctgaa gcgtgcgcac cgcgtgattc tttacgtgct tcggcagaca
     7021 ccaaagtcgc tttcgccact tcaatcaggt tatccaattc caaagcctcg atacgcgcgg
     7081 tattccacac tttgctcttg tctttgattt cggtacgttt cacacgctcg gcaatcgcca
     7141 tgacttctcg aacgcctttg ctcagaatct catcagtacg gaacacgccg gcgtgcagtt
     7201 gtacagagcg ttgcagttcg cgacgcaatg catcaacgtt ttcaccatcg gtttggttgt
     7261 ccaaacgctc gatacgttgg cgggtcaact cacctgcatt agcaggcaaa ggtttccagt
     7321 cgctttgctc tttgatgaat ttaatcatgc tgtcgccggc agctttaccg aataccacca
     7381 agtccaacag ggagttggta cccaagcggt tcgcaccgtg tacggaagca caagcgcact
     7441 cacctgccgc atacagacct tttacaggca cttcgtaatc ttcaccttgc ggaacgacaa
     7501 cttcgccgtg gtaattggtc ggaatgccgc ccatcatata gtgggtagtc ggcacaacgg
     7561 gaatcgggtc tttaatcgga tcgataccgg cgaactgaat ggaaatctcg cggatgcccg
     7621 gcagtttttc cataattttt tctgcgccga tatggtcgat tttcagtaag acatggtctt
     7681 tgtttttacc gcagccgcga ccttcgtaga tttccatcgc catcgcgcgg gaaacaacgt
     7741 cgcgagaagc caagtctttt acggtcggcg catagcgttc cataaagcgt tcgccgtcgg
     7801 cattcaacag aataccgccc tcgccgcgta cgccttcggt aatcaacacg cccgcacccg
     7861 ccacgccggt cgggtggaat tgccagaatt ccatgtcttc caacgggata cctgcacgcg
     7921 cacaaatacc caaaccatcg ccggtattca tataggcatt ggtagaagac gcataaatac
     7981 gaccgccgcc gccggtagca aacatcacag ctttagcgtg gaaaatataa acttcgccgg
     8041 tttccatttc catggcggtt acgccgacga catcgccgtt ttcatcacga atcaaatctt
     8101 gtgccgtcca ttccacaaag aattgcgtat tggcacggac gttttgttgg tacaaagtat
     8161 gcagcatcgc atgacctgta cggtcggcaa ccgcacaggc gcgttctacc gcgcgtttac
     8221 cgtgttcggc agtatggccg ccgaaaggac gctgataaat tttaccgctt tccacacggt
     8281 caaaaggcat acccatgtgt tccaactcaa ttacggcttc aggcgcggcg cggcacataa
     8341 actcaatcgc atcttggtcg cccaaccagt cggaaccttt cacggtatcg tacatgtgcc
     8401 agtcccaacg gtcttcctgc acattaccca gagaggcgga aataccgccc tgcgccgcta
     8461 cggtatgcga acgggtcggg aacactttag acaaaacggc acaattcaga ccggatttgg
     8521 ataattggag ggctgcgcgt aaacctgcac caccaccgcc gacaatcacg gcatcaaact
     8581 tgcgaacagg aaaacccata cttaccccca aatcacttta actgaataca cgagacagcc
     8641 gaccagccaa acgatggtgg caacctgcaa aaacaaacgc acgccgaagg gtttgatata
     8701 gtccatccac aaatcgcgga tacccaccca agcgtgcaag aatacggcga tgaagctcac
     8761 ttgggtaaat acttttaccc aagtttgact aaaaaatgcc tgccatgccg aatattcttt
     8821 aggcagggaa aatagaacca ctaaaagtgc aacggtataa atcaacataa taaccgcagt
     8881 cgcacgttgc atcacccaat cgcgcaaacc gtaatgggca ccggtcaatt tacgttctac
     8941 cataacaacg ctcccaaaac gacagtcaaa accaatgcag aagcaaatac ggctttagcg
     9001 gtattgcgcg cagtattcag ctcaaggcct ttgtgcgcat ccaaaaataa aaagcggata
     9061 ccggcaaggg aatggtgcag ataagcccac aatacgccga ttaaaaccag cttgaccaaa
     9121 ggatgggaaa caatggcacg gtaagtttca aatgcagact cttgactcag ggtgccggac
     9181 aggaaataca gcaggaaagg cagcataata aacagcccga ccccgctgat gcggtgaagg
     9241 atggaaacta tcccgggtat cggcagacgg atgttcggca aatccagata aacaggacgc
     9301 ggtttgacag acatagtcaa ttcctctgta gttatatatc gactcaaaaa ccgtaaaccc
     9361 attgctacac tgggttacat aaacgttaat ttacctgttt tatcccattt tgaacagtgt
     9421 attttaaaaa caaactgata gattttgaca aacacgcgtg aaaacagcag attaaaagaa
     9481 agatttttag ttttgccccc ttcccgacac ggtatcagca tccgacctcc aaccccatcc
     9541 tcaaaaataa aatgccgtct gaaaaaattt cagacggcat tgttttgcca tatcggtcag
     9601 gctttcaatt tcgcatcggc atcacgcaac gcagtacgca gaccttcctc gataacagga
     9661 tggtagaacg gcatatccag catttgcgga acggtcatct tcatttgatg cgcccatgcc
     9721 aacaggtgcg ccaaatgttc ggcggcaggg cctacgattt ccgcaccaat gaagcggccg
     9781 gttgcttttt cggcatacag gcgcatatgg cctttgttta ccagcatcac gcggctgcgg
     9841 ccttggtttt taaacgatac ttcgccgatg acaaattcgt cgggttggta ttgcgcggta
     9901 acctgcgcgt atttcaaacc gacaaagcca atttgcggat tggtaaacac cacgccgatg
     9961 gtgctgcggc gcaaaccgcc gccgatattc ggatagcggc ccgcgttgtc gccggcaatc
    10021 ttgccttgat cggcagcttc gtgcagcagg ggcagttgat tggatgcgtc gcccgcaata
    10081 aagatatgcg gaatactggt ctgcatggtc agcggatcgg caacgggtac gccgcgcgca
    10141 tctttgtcga tattgatgtt ttccaaaccg atattgtcaa cgttcggacg gcggcctacg
    10201 gctgccagca tatattcggc aacaaatacg cctttttcgc catcctgctc ccaatggact
    10261 tctacattgc cgtctgcgtc gagtttggcc tcggttttag catccaaatg cagtttcaat
    10321 tcttcaccga acacggcttt cgcctcgtct gaaacgacgg ggtcggaaat gccgccgatg
    10381 atgccaccca aaccgaaaat ttcaactttc acgcccaaac ggtgcaatgc ctgacccagt
    10441 tccaaaccga taacacccgg tccgaacacg gcaacgcgct taggcagcgt atcccatgag
    10501 aaaacgtcat cgttgataat caaacgattg cccaaagact gccattgcgg caggatgacg
    10561 ggacgcgaac cggtagcaat cacgaaactt tttgccgtaa tttgggtatg gtcgtcgatt
    10621 tggacggtat gctcgtcgat aaacttagcc gagcccatga tgcgcttgtc ggcaggccac
    10681 ttttccacat cagcaacgac aaagccgaca aaacggtcgc gctcggattt aacacgccgc
    10741 attacttctt caccgttgac gacgatgctg tctttgtcca aatgcacgcc gaacgggtcg
    10801 gtatgcagtg cgtggtggcg cgcttctgcg gcggcaatca agagtttgga aggcatacaa
    10861 cccacccgcg cgcaggtcgt gccgaacaca ttgttttcaa tcaggtaaac attgttcgaa
    10921 tgcaaacggg cattgcgaaa cgcgcccata ccggcagtac cgccgccgat tacgacgaca
    10981 tctgcttgaa tttttttcat aatctttgtc cttctttatt aagcgtccga agcagcatca
    11041 gcgtgatgcg tatcaggttt tcagacggct tttttaataa actatcgaca atataaaacc
    11101 aatagccatt ttaaaagttt cgatttaaaa caataatctc aaattctact tgtaaatata
    11161 gagctattca gaacgaccgt gtagcgtatc gtctgaataa ctctattttc ctgttcagac
    11221 ggttttattc aaaccgcctt aagcaaacag ctatcagttt ttagccaagt aagcttccaa
    11281 atcttcgctg ccgccgatgt atttaccgcc gatgaagact tgaggagcag tcatcttgcc
    11341 ggtaatggcg cgaacggaag taacggttgc atctttgccc aatacgattt cttcgtaaga
    11401 caaacctttg tcttgcaaag cttgtttggc tttggcgcag aattggcagc cgggtttggt
    11461 aaagatggca acagactctt gagccttcca atcgggagca acgaattgca gcatagtatc
    11521 tgcatcggat actttgaaag gatcgcccgg ttcttcaggt tcgatgaaca ttttttcaac
    11581 cacgccgtcg ttaaccagca tggagtaacg ccaagagcgt ttaccgaagc ccaagtcttc
    11641 tttaccgacc agcataccca taccttcggt aaattcgccg ttgccgtcag gaatcatgta
    11701 gatgttgtcg gattcttctt cggcagccca agcgttcatt acgaacgtat cgtttacaga
    11761 tacgcagtag attgcgtcaa cgccgttttc tttgaacgcg ccgaacaatt cgttgtaacg
    11821 cggcaggtgt gaagaagaac aagtcggggt aaatgcaccg ggcagggaga atacgactac
    11881 ttttttgcct ttgaacaaat catcggtaga cacatctttc caagtgtcgc cgacgcgggt
    11941 gcggaatact acggaaggta ctttttgacc ggtacgatct tgcaaagcca ttttaagctc
    12001 cttaatagat tggtttgaga aataattgtg aatcgctggg cattctaccc catgcaaaat
    12061 gatttgtata atttatagtt caaataatat aaattattta aaactatcaa acacaactcc
    12121 gatttgcctg tttcccacat ataaagccga atgagaaaaa aacaagctgc aatgaaaaga
    12181 ttttccggca actgcgccct tgcgccgcaa atcaggacaa aataccgtct gaaaggcttt
    12241 cagacggtat ttattcatac ggtctcggct tatttcgcca attcggcacg caatttgtgg
    12301 gttacgttca tcatcacttg gagttgttcc agagtttctt tccagccgcg tgttttcagg
    12361 ccgcagtccg ggttaaccca cagacgttca accggtacaa cctcgatggc tttgcgcaac
    12421 aggtgctcca cttcggcttc tgtcggtacg cgcgggctgt ggatgtcgta aacccccggg
    12481 ccgatgtcgt tcgggtattt gaattcgccg aacgcggtca agagttccat gtcggaacgt
    12541 gaagtctcga tggtgatcac gtccgcatcc attgcagcaa tcgcaggcag gatatcgttg
    12601 aactcggagt agcacatatg agtgtggatt tgtgtgctgt cttcgcaacc ggcagaggac
    12661 aggcggaagg attcgcccgc ccagttcagg taggcatccc aatcggcgcg tttcagcggc
    12721 aagccttcgc ggatggcagg ttcgtcaatt tggatgactt tgatgcctgc tttttccaga
    12781 tccaatactt cgtcgttcag agccagtgcg atttgtttgc acacggtaga gcgaggaata
    12841 tcgttgcgga caaaagacca ttgcagaatg gttacagggc cggtcaacat acctttcatc
    12901 gggcgtttgg tcaggctttg tgcgtaagta gaccaggcga cagtcatggc ttcaggacgg
    12961 cttacgtcac cgaagataat cggtggttta acacaacgtg agccgtagct ttgtacccag
    13021 ccgtattggg tgaatgcaaa accgctcaac aattcgccga agtattcgac catgtcgtta
    13081 cgctcggctt cgccgtgtac cagtacgtcc aagtccagtt tttcttgctc ttcaactacc
    13141 aaggcgattt cttttttcat cgcggcttcg taatcggcag cagacagttc gccttttttg
    13201 aaggctgcac gtgcttggcg gatttcggta gtttgcggga aagaaccgat gttggtagtc
    13261 ggcagcagag gcaggttcaa ccatgcttgt tgcgctttga tacggtcggc aaatggagat
    13321 ttgcgttggt ctgcgttggc aggcaaatcg gccaggcgtt tggcaacgtc tgcacgatgg
    13381 atttcgctgc tgttggcacg ggagtcggca gcagcttggc tggcggccag ttcttcggca
    13441 acagaatcac ggccttcgtt caatgcggct ttcagaacgc gcaattcttg ggttttttgc
    13501 agggtgaatg ccaaccaaga gtacaggtca ggtttgttgg ctttcagttt ttcttcaact
    13561 gacaagtcaa atggagtgtg cagcagagag caagagctgg agatccacaa acggtcgccc
    13621 agtttggctt gcagagactc aacagtttcc aaaactttgt tcaggttggc gcgccaaata
    13681 ttgcggccgt caatcacgcc ggcggacagg actttgtcgt agtcggcgaa cgcgtccagt
    13741 tgctcgggag cgcgtaccaa gtcgatgtgc agaccgtcaa caggcagggc tttcagcaat
    13801 gcggcgtgtt cggcaacaga accgaagtaa gtgctcaaca ggattttggc acttactttg
    13861 ttcaaagtag cgtaaacgtc tttgtaggct tccacccatt ctttaggcaa atcgacagcc
    13921 aaagcaggct cgtcgatttg aatccactcg gcaccggctt caaccaaagc agtcaggatt
    13981 tcaacgtaaa caggcaacag tttaggcaac aggctcagac ggtcgaattc gacggcgcct
    14041 ttttctttac ccacccacag gaaagtcaac ggacctacaa cggtcggttt ggctttcaga
    14101 ccgagggctt gggcttcttg cagttgttgg acgtagtgtt tggcgttggc tttgaattca
    14161 gtattggcgt ggaattcagg caccaagtag tggtagttgg tgtcgaacca tttggtcatt
    14221 tcgatagcga attggtcttt gttaccgcgc gccagttgga agaattgttc caaagacagg
    14281 ttttggctgt cgaagccgaa gcgggcggga atcgcgccgg tggcgacttg caggtcgagg
    14341 atgtggtcgt agaaagtgaa atcgcctgcg gcaacgtaat cggcgttggc agcagcttgg
    14401 tgtttccagt ttttctcgcg caagtcttta gcaacagcca gcaattcttg ctcgctgatt
    14461 tctttgcgcc agtatttttc ttgggcgaat ttcaattcgc ggaaggcgcc gacacgcggg
    14521 aagcctgaga aatgtaatgt tgtcatgtta aactctccag ttggattttg taaggaccgg
    14581 ttcaatccga atcggccggt attgtaaatc agaatggcta ggatgggggc ggcgttttgc
    14641 ttttcagacg gcctcggatg ccgtctgaag ccgttttcag ctttaagggc gcacgcctaa
    14701 aatatggcag atggcgtaag tcagctcgct gcggttaagc gtatagaagt ggaaatcttt
    14761 cacgccttcg cgggacagga ctttgaccat atcgatggcg atacttgccg ccaccagatt
    14821 gcgcgtacct tggtcgtcgt ccaaaccttc atacatttgc gacagccagc ttgggatttt
    14881 gacgttggtt acttgagcca ttttaccgag ctgcttgaag ttggtaacag gcaaaatacc
    14941 ggggacgatt tccacatcga tacccaacat cacgcagcgg tcgcggaagc gcaggtagcg
    15001 ttctacgtca aagaaaaatt gggtgataac gtggttcgcg cccgcatcga ttttgcgttt
    15061 caaattaatc aggtcggctt gtgcggattt cgcttcggga tgcacttcgg gatatgctgc
    15121 tacagagatg tcgaagtcgg cgacggagcg taatagctta accaagtctt cggcataaaa
    15181 cggttttttc tcgtaaccgg gcggctcgtc gccgcgcagg gcgacaatgc ggcggatgcc
    15241 gctgtcccaa tagtctttgg cgatttggcg caattcgtcg ggagaagcgt cgatgccggt
    15301 caggtgcggc gcggcttcca agccggtttc ttgcttaatg cgtttgacga tgccgtgcgt
    15361 gcggtcgcgt tcgccggaat ttgcgccgta ggttacggat acgaacttgg gatgcagggt
    15421 ttgcagacgg tggatggaat cccacagcat cgtttccatt tgttcgtttt tcggcgggaa
    15481 aaattcaaac gaaacgttga tgtcgccttt caaatcggaa aggctgttgt ttaacgcatt
    15541 gatttctttt gcgtaattca tggctgcgta ccttttatta tcttttatat gatattttca
    15601 ggcaacataa taaagttgcg ccaaacatga gtcaatttca aaattttcag atttatcatg
    15661 aaaatttcta atatattaca aaaatagtta aatttccttg tacaagcctt ctaatttatg
    15721 ataaagtttg ttatgttata acaattcaac taaggcgata tatgaaaccg aatattcatc
    15781 ctgacaatta tcgaaccgtc ctttttttcg acagcagcgc caatgaaggc tggttgattc
    15841 gttcttgcgc cgaaacacac ggaaaaacga tggtttggac agacggcaaa gaatatccgc
    15901 tgttttcgct ggatacttct tccgcatccc atcccgtcta tactggcaaa cagcgcaacg
    15961 tcaacaccga aggccgtgcc agcaaattca accaacgttt ccaatccgtc atgtcatcgt
    16021 ttagaaagga caaataatgc aggttctgtc ttcactcaaa accgccaaac aacgccaccg
    16081 cgactgccaa atcgtcaggc gcaggggcaa agtttacgtc atctgcaaaa gcaatccgcg
    16141 ttttaaagca cgccaacgct gactccctgc ccttcctgct tcggttgtaa atcccctcct
    16201 accgcaagcc cttttcatca aatatgccgt ctgaaacaga aaaatgcgtt tcaggcggca
    16261 ttttttccgt caatacgaat ccggaatgtg tttgaaatac agcataaaca gataccaaaa
    16321 cagtgtcgcg gcagctgcgc caagcagtac ccatgcgctg attttggcga catcgcgcag
    16381 ggcacgtttt tgcttgcggc tgaagaggcg gttgataatc agcgcggcaa gtgcgaaaaa
    16441 gaaaaaaata cggaaaagtc tgcctatcat atagggaagc ggtggaggtc gtctgaaaaa
    16501 gtatggatcg gttgcggcgg catggggacg gatgtttcag cgcgtcgggc tgcttgtccg
    16561 accgtgtcaa aaagtcatgc cgtttgcgat ataataacgc ttttcgccgc atttgttgga
    16621 acaggatatg agtcaaaatg cctcggtggg cattgtaacg ccccaaaaaa ttccgtttga
    16681 gataccgctg gttttggaaa acggtaaaac tttgccgcgt ttcgatctga tgattgaaac
    16741 ctacggcgag ctgaatgccg aaaaaaacaa tgcggtttta atctgccatg cgctgtcggg
    16801 caaccatcat gttgcgggca aacattcggc ggaggataaa tatacgggct ggtgggacaa
    16861 tatggtcggt cccggcaaac cgattgatac ggaacgattt ttcgtggtcg gtttgaacaa
    16921 tctgggcggc tgcgacggca gcagcggacc tttgtcgatc aatcctgaaa cgggcaggga
    16981 atacggcgcg gattttccgg tggttacggt gaaggactgg gtaaaatccc aagccgcgct
    17041 taccgattat ctcggcatcg ggcaatgggc ggcggttgtc ggcggcagtt tgggcggtat
    17101 gcaggctttg cagtgggcga tttcctatcc cgaacgcgtg cgccatgcct tagtgattgc
    17161 gtccgcgccg aaactgtcca cgcaaaatat cgcgtttaat gatgtagcac gtcaggcgat
    17221 tttgaccgat cccgatttca acgaaggaca ttaccgcagc cgtaacaccg ttcctgcacg
    17281 gggcttacgg attgcccgca tgatgggaca cattacctat cttgccgaag acggtttggg
    17341 caaaaaattc ggacgcgatt tgcgctccaa tggctatcaa tacggctttg gtgttgaatt
    17401 tgaagtggaa tcctatcttc gctatcaggg cgacaaattc gtcggacggt ttgatgccaa
    17461 cacctatttg ctgatgacca aggctttgga ctatttcgat ccggcggcgg atttcggcaa
    17521 cagcctgacc cgcgccgtgc aggatgtgca ggcaaaattc tttgtcgcca gcttcagcac
    17581 cgattggcgt ttcgcgcccg aacgttcgca cgaactggtc aaggcactga ttgccgccca
    17641 aaaatccgtg cagtatatcg aagtcaaatc cgcacacggg cacgatgcct ttttaatgga
    17701 agacgaagcc tatatgcgtg cggtcgccgc ctatatgaac aacgtttata aggaatgtca
    17761 gcaatgaacc tgcgcgatga tttgcaactg atttacgacc ggatacccga aggcagccgc
    17821 gtcttggact tgggctgcgg cgacggcgaa ctgcttgccg ccttggtcga acacaaaaaa
    17881 tgcagcggct acggcatcga aatcgacacc gacagcgtga ttgccgcgat gtcgcgcggc
    17941 gtgaatgtta tccaagccga tttggaagaa ggtttaaccg cattcaacga tcaaagtttt
    18001 gatgtgattg tgttgagcca gaccatccaa gcgatgcaga ataccgaaaa aatcctgcgc
    18061 tgcctgatac gcgtggcgaa acaggcgatt gtcagcttcc cgaatttcgg ctactggcgc
    18121 aaccgcgtcc aaatcgcact cggcggacat atgccggttt ccgaacgtat gccctaccat
    18181 tggtatgata cgccgaacat ccattggtgt acgctcaaag actttgattt gttgtgcgcc
    18241 aaaaacaaca tacgcgtcct cgagcgcgcc gtgatgacgg gcaacagaca ggtcaaacat
    18301 ttccccaacc ttttgggcag cctggcgttt taccgcgtcg gctaagacag gttgagaacc
    18361 ttgtcggcaa taacaggttc ttcggttcta ttaacaacag gccgtctgaa aaatgaaacg
    18421 gcaggttttc agacggcctt ttcaatattg gaaacaatag gatgaaaaac aaaacctcat
    18481 cacttctctt atggcttgcc gcaatcatgc tgaccgcgtg ttctccgagc aaagacgata
    18541 aaaccaaaga agtcgatgca tccgctgctt cgtccccggc atccgccgct tcgtcttccg
    18601 cgtcccaatc cgatttgcaa ccggccgcat ccgcccctga taacgtcaag caggcagaaa
    18661 gcgcgccgcc gtcaaattgc accggcctgc accccgcctc cggcattgac gatctcatgc
    18721 agcaaatcgc cgaacacatt gactcggact gtctgtttgc cctttcccat cacgaactgg
    18781 aaacccgttt cggcttaccc ggcggaggct atgacaacat acagcggctg ctgtttcccg
    18841 acatccgccc tgaagatccc gactaccatc agaaaatcat actggcaatt gaagacttgc
    18901 gttacggaaa gcgcacgatc agccggcagg cacaagatgc cttgatggaa caggaacgcc
    18961 gcctccgaga agcgacgctg ttgctgatac agggcagtca agaaacccgc ggacaaggcg
    19021 aggagccgaa acgcacgcgt tattttgaag tttcggcaac ccctgcctat tcgagccggc
    19081 acaacaacgg acttggcggc aatttccaat acatcggcca attgcccggc tatctgaaaa
    19141 tacacggaga aatgcttgaa aaccaatcac tcttccggct gtccaaccgt gaacgcaatc
    19201 ccgacaaacc gtttttagac atccattttg acgaaaatgg caaaatcacg cgtattgtcg
    19261 tttacgaaaa aaacatctac ttcaatccaa acttggggcg aagataaaaa aataccgtct
    19321 gaaacgtttt cagacggcat ttttcaatgc aacaaatcaa gcgcgtttgc ggaattcgcc
    19381 ggtgcgggta tcgatttcga ttttgtcgcc gttttcgatg taagacatca cttggatttc
    19441 ggtgccgccg accaggcgcg cggttttcat cactttgccg gaagtgtcgc ctttgacggc
    19501 aggctcggtg tactcgactt cgcgcacgat gatggtgggc agttcgacag aaatggggtt
    19561 gccttcgtag aaggtaactt cgcattggtc ttccataccg tcaacgatga atttcaacgc
    19621 gtcgccgatg ttgtcggctt cgatttcgta ttggttgaat tcttcatcca taaagacgta
    19681 catcgggtcg gcaaagtagc tgtacgtaca gtttttgcgg gacaggatga ccacgtcgaa
    19741 tttgtcgtcg gctttgtaaa tggtttcgga agccgcgccg gtcagcaggt ttttcagttt
    19801 catgctgact ttggcggaag agcggccgcc tttgatgtat tcggtttttt gaacgaccat
    19861 aggatcgttg ccgaccataa atacattgcc ggcgcgcagt tcttgtgctg ttttcattgt
    19921 gattttccaa tcaaatcggt tgtcgtaaaa cgcgctattc tagcgtattt tttgatgctt
    19981 tgaaacaaag gcagcgagtt tttcaggagc tgacggctgc tcgaaaagat aacggctcca
    20041 atcctccgcg ccttgccgcc agtcgttttg atgttgttgc agggtttgcc aacattcgag
    20101 gcgttgcgtg gcggataaag cctctccgcc gttgaggtcg tctgaaaggc ggcggtgtac
    20161 cgatgcggtt tcgggcgagt aaaatccatg cgccttatcc caaaaggcgt ggagtttatc
    20221 gagatggaca ttctcgtctt gcgggtagat gtgccaaaag aagggtttgc cggcaagctg
    20281 ggcgcgcacg aaactgtctt cgccgcgtat cacggcgcag tcggcgaggt gcagcagttt
    20341 gtcgaagtcc tgttgcggca cgaaagggat tttgacgagg cggacggatg ccgtctgaaa
    20401 aacatcgccg tcgttttgca gggcatcttg cggaataacg ccgctttgtt tgaggctgtc
    20461 gatgatttgc gtccccgcca gcaacagtgt catcgggctg cctgcctgtc gccacatttc
    20521 cagccacttt gcccaaacat cgctccgata gccgaaaagc agccattcgg gggcgttttt
    20581 ttcgggaagc atcagccgct ctcgcaaggc ttcggtatcg aaacggacgg catttcggta
    20641 atcgcgttcg cgtatcaacc cgccgctttt ttcgctgaaa cccataaacc aaaaatattt
    20701 ttgaacactc tcctgcagcg aaggcatcag atgcagcctt tcattgcttt cttccgcgct
    20761 caaatattcc caattcagcc aaagcggctt gtgtcggcgg atgatgtgca gcacattttc
    20821 gggcaggtcg caggcaaaag tttcgataac gatatcggga acaagggcag tatcgatatc
    20881 cgccgcatcg gaatgccaag tgcggacatg aatatcctga tgaacgcagg gaacatcggg
    20941 caaatcaggg caaagcgcac gcaaggcgga cacatcgtcc gtccacaaat gcacctgcca
    21001 accgagttcg cggtgcaaaa cacgggcgag ccgccacgaa acgccgatgt cgccgaaatt
    21061 gtcgatgacc ttgcaaaaaa tccaacagac aaaaggagga gtattcatag aaataacgga
    21121 aacgggctaa aacgcgccaa aatagtggaa caaatacaca atcagcaaaa taatcggaat
    21181 aaacagcaac atagtttgac gtttcaaatc aaactcttgt ttcaaatgat gcttgatggt
    21241 gtcgaaaagg acgaatttga acaaaaacgt cgcttcgcag gcaaggatga tgccgttaat
    21301 cagatgctgg ggtttgtctt cgggcggatt ggcggcgaaa acggcaagcg tcgccaaggg
    21361 tatcaggcag acgacaagcc aacggacaag caggtttcgg gacattgcaa ggctttcaaa
    21421 aaagcaaaac gccattatcg ccccaagcgc acgccttgtc taacggatgc gccggagatg
    21481 ccgtctgaag ccttgccgcc ggaaaacgcc gcaccgccga acctttaaat acgcccggga
    21541 cgggcgttcc ccgaaaaatc ggacgctgcc gccgatgcct gaggacaagg cggcagcagg
    21601 cacgggcata ttgaaaaccc ggcgcgtcgg tttga
//
LOCUS       DAWITQ010000016        21335 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.016, whole genome shotgun sequence.
ACCESSION   DAWITQ010000016 DAWITQ010000000
VERSION     DAWITQ010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21335)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21335)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21335
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.016"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(79..771)
                     /locus_tag="WIX18_000529"
     CDS             complement(79..771)
                     /locus_tag="WIX18_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEZ5237682.1"
                     /translation="MFHAFILRIYTMIKNISKLINHAVLIGFIPNIVFAYPIFAENPA
                     SYQNIHVRSWKARRDSGIVKQDLDFSCGAASIATLLNNFYGRHYSEAEILDKMDKTQM
                     RASFDDMQRIMPELGFEAQGYALPFEQLVQLKIPVIVYLKYRKNNHFSVLNGINGETV
                     LLADPSLGHVSMSKSQFLSAWKTRDGEMEGKILAIVPKNTDFVRNQMFFNKNPVRQTR
                     FTVEQIQMRQKR"
     gene            complement(1077..1634)
                     /locus_tag="WIX18_000530"
     CDS             complement(1077..1634)
                     /locus_tag="WIX18_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237683.1"
                     /translation="MMQKHKCLIDFILTVASQIAYADLPLSLEELLTDKGKFKLESSI
                     SYINTERNQSEFANPIYVQTSATKIATVMAMMITPVMAQNLDSQVFDSQNVKAIQLSQ
                     AEMKETQGEFVPIIAAAAFGGALGAWEYHGANLYNHGKLGTAQGAATAAGIGAATGVA
                     AKQGWLLLPEADWLEIWHGDRVFMH"
     gene            complement(1878..2036)
                     /locus_tag="WIX18_000531"
     CDS             complement(1878..2036)
                     /locus_tag="WIX18_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237684.1"
                     /translation="MKTPLPICTLSALAACTLSGQGGSRVYGEIKARDLCVTAPILLS
                     AFCLACSR"
     gene            complement(2033..2875)
                     /locus_tag="WIX18_000532"
     CDS             complement(2033..2875)
                     /locus_tag="WIX18_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ5237685.1"
                     /translation="MLVCNPYEVVIHGTTSSGKIFRPSDWAERLCGILSSFTKDNRLS
                     YSKWVRPMLVDNIRCVAVDKKLETDNPQMFRFLMDFAADNDLRVIDCKALLEEREQGG
                     QNDPTDERVLLAQAIEEKHAAEKAQEQTVSGASYVLREIGADDTATAFAALSVLRSAL
                     TDINRFTEQINKVQRPQGYRLLGIFEEGKHNAVAVCGFREACTLAGGRHIHIDDIVTL
                     PQSRRKGYASRLLEEVRKIGAETGVTKIHLNVHVNHDRADAHRLYFKNGFEICAYHFR
                     CDPK"
     gene            3111..4031
                     /gene="pyrB"
                     /locus_tag="WIX18_000533"
     CDS             3111..4031
                     /gene="pyrB"
                     /locus_tag="WIX18_000533"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HEZ5237686.1"
                     /translation="MPNPLYRQHIISISDLSREQLECLLQTALKLKAHPRGDLLEGKL
                     IGSCFFEPSTRTRLSFETAVQRLGGKVIGFSDGANTSAKKGETLADTARIISGYTDAI
                     IQRHPKDGAARVAAEFSRVPVINAGDGTNQHPSQTLLDLVTIYETQGRLDKLKIAMAG
                     DLKYGRTVHSLCQALKRWGCEFAFVSPPSLAMPDYITEELDEAGCRYRILGSLEEAAE
                     WADILYMTRVQRERFDEQEFAKIQGKFNLEASMLAHAKPNLRVLHPLPRVDEIHPDVD
                     ATPHAYYFEQATNGVYARMAILSLVLNEEV"
     gene            4041..4499
                     /locus_tag="WIX18_000534"
     CDS             4041..4499
                     /locus_tag="WIX18_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HEZ5237687.1"
                     /translation="METPKLSVEAIEKGTVIDHIPAGRGLTILRQFKLLHYGNAVTVG
                     FNLPSKTQGSKDIIKIKGVCLDDKAADRLALFAPEAVVNTIDNFKVVQKRHLNLPDEI
                     AEVFRCPNTNCAGHGEPVKSRFYVKKHNGQTRLKCHYCEKTYSRDSVAEA"
     gene            4564..5229
                     /locus_tag="WIX18_000535"
     CDS             4564..5229
                     /locus_tag="WIX18_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237688.1"
                     /translation="MMMHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLL
                     SALSAVALVWLAWAFVSARSKAKAEKFYREKMIQNESIHPVLHASLQHLEHKPQMLAL
                     LVKNHGKGMAEQVRFKAEVLPDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFAD
                     IFELSAALEGRAFKGMLKLTAEYKNIFGDACRSETALELGALNQALQEISKTSEKSKR
                     IFY"
     gene            complement(5292..6509)
                     /locus_tag="WIX18_000536"
     CDS             complement(5292..6509)
                     /locus_tag="WIX18_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEZ5237689.1"
                     /translation="MQRRIITLLCAAGMAFSTQTLAANLEVRPNAPERYTVKQGDTLW
                     GISGKYLYSPWQWSRLWDANRDQIHNPDLIYPDQVLVLRHVDGEPRLGLEQTDGIPVV
                     KMSPDKEVSGYGIPAIDVNFYRIFMRHPQIVSRKETAAAPRLLSGPEGRLLYTKGTRV
                     YTKGLKEPGRYLTYRINKNITDPDTGKFLGQEVAFSGIVRSLDYTDSALEQRSKQAGE
                     RLKDNEYHTRTHPLITPLRTPSIQPLVVETAISEIQQGDYLMKMPEDTDRFNMMPHEP
                     SRPVQAKIVSVFEGTRIAGQFQTITIDKGEADGLDKGTVLSLYKRKKTMQVDLSNNFK
                     SRDTVELISTPAEEVGLAMVYRTSEHLSSAIILENISDISVGDTAANPGRDLDNIPDQ
                     GRSRVKFGFNRSE"
     gene            6651..7196
                     /gene="def"
                     /locus_tag="WIX18_000537"
     CDS             6651..7196
                     /gene="def"
                     /locus_tag="WIX18_000537"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEZ5237690.1"
                     /translation="MKNRRRIRRRKEKIMALLNILQYPDERLHTVAKPVEQVDERIRK
                     LIADMFETMYESRGIGLAATQVDVHERVVVMDLTEDRSEPRVFINPVIVEKDGETTYE
                     EGCLSVPGIYDTVTRAERVKVEALNEKGEKFTLEADGLLAICVQHELDHLMGIVFVER
                     LSQLKQGRIKTKLKKRQKHTI"
     gene            7283..8209
                     /locus_tag="WIX18_000538"
     CDS             7283..8209
                     /locus_tag="WIX18_000538"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEZ5237691.1"
                     /translation="MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLT
                     APPVKQAALELGLRVAQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKH
                     GCLNIHASLLPRWRGAAPIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTD
                     TANEVHDALMEIGAAAVVADLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSES
                     AAVIERKIRAFNPVPAAWVEYQGKPMKIRRAEVVAQQGAAGEVLSCSADGLVVACGEN
                     ALKITELQPAGGRRMNIAAFAAGRHIEAGTKL"
     gene            8288..9547
                     /gene="rsmB"
                     /locus_tag="WIX18_000539"
     CDS             8288..9547
                     /gene="rsmB"
                     /locus_tag="WIX18_000539"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HEZ5237692.1"
                     /translation="MSMALAQKLAADSIAAVAEGRNLQDVLAQIRTAHPDLMAQENGA
                     LQDIAYGCQRYLGSLKHMLAQMLKKPIGNPQLESLLLAALYQLHYTRNAPHAVVNEAV
                     ESIAKIGRGQYRSFANAVLRRFLRERDKLVASCKKDDVAKHNLPLWWVAYLKNHYPKH
                     WHNIAAALQSHPPMTLRVNRRHGNAESYLEKLVAEGIAAKALDEYAVTLEEAVPVNRL
                     PGFSDGIVSVQDFGAQQAAYLLNPKDGERILDACAAPGGKTGHILELADCRVTALDID
                     AGRLKRVEDNIARLGFQTASTACADAQDLSAWYDGKPFDAVLADVPCTASGVARRNPD
                     VKWLRRPTDALKTARQQEALLDALWQVLKSGGRMLIATCSVFVEENDGQLQKFLNRHA
                     DAELIESRVLLPNKHQDGFYYALIQKH"
     gene            9513..10112
                     /locus_tag="WIX18_000540"
     CDS             9513..10112
                     /locus_tag="WIX18_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4390 domain-containing protein"
                     /protein_id="HEZ5237693.1"
                     /translation="MAFITRLFKSIKQWLVLLPMLSVLPDAAAEGIDVSRAEARITDG
                     GQLSISSRFQTELPDQLQQALRRGVPLNFTLSWQLSAPIIASYRFKLGQLIGDDDNID
                     YKLSFHPLTNRYRVTVGAFSTDYDTLDAALRATGAVANWKVLNKGALSGAEAGETKAE
                     IRLTLSTSKLPKPFQINALTSQNWHLDSGWKPLNIIGNK"
     gene            10112..12232
                     /locus_tag="WIX18_000541"
     CDS             10112..12232
                     /locus_tag="WIX18_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HEZ5237694.1"
                     /translation="MRRFLPIAAICAVVLLYGLTAATGSTSSLADYFWWIVAFSAMLL
                     LVLSAVLARYVILLLKDRRDGVFGSQIAKRLSGMFTLVAVLPGVFLFGVSAQFINGTI
                     NSWFGNDTHEALERSLNLSKSALNLAADNALGNAVPVQIDLIGAASLPGDMGRVLEHY
                     AGSGFAQLALYNAASGKIEKSINPHKLDQPFPGKARWEKIQRAGSVRDLESIGGVLYA
                     QGWLSAGTHNGRDYALFFRQPVPKGVAEDAVLIEKARAKYAELSYSKKGLQTFFLATL
                     LIASLLSIFLALVMALYFARRFVEPVLSLAEGAKAVAQGDFSQTRPVLRNDEFGRLTK
                     LFNHMTEQLSIAKEADERNRRREEAARHYLECVLEGLTTGVVVFDEQGCLKTFNKAAE
                     QILGMPLTPLWGSSRHGWHGVSAQQSLLAEVFAAIGAAAGTDKPVHVKYAAPDDAKIL
                     LGKATILPEDNGNGVVMVIDDITVLIHAQKEAAWGEVAKRLAHEIRNPLTPIQLSAER
                     LAWKLGGKLDEQDAQILTRSTDTIVKQVAALKEMVEAFRNYARSPSLKLENQDLNALI
                     GDVLALYEAGPCRFAAELAGEPLMVAADTTAMRQVLHNIFKNAAEAAEEADVPEVRVK
                     SEVGRDGRIVLTVCDNGKGFGREMLHNAFEPYVTDKPAGTGLGLPVVKKIIEEHGGRI
                     SLSNQDAGGACVRIILPKTVKTYA"
     gene            12225..13502
                     /locus_tag="WIX18_000542"
     CDS             12225..13502
                     /locus_tag="WIX18_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HEZ5237695.1"
                     /translation="MRSSDILIVDDEIGIRDLLSEILQDEGYSVALAENAEEARKLRH
                     QARPAMVLLDIWMPDCDGITLLKEWAKNGQLNMPVVMMSGHASIDTAVEATKIGALDF
                     LEKPISLQKLLSAVENALKYGAAQTETGPVFDKLGNSAAIQEMNREVEAAAKRTSPVF
                     LTGEVGSPFETVARYFHKNGTPWVSPARVEYLIDMPTELLQKAEGGVLYVGDIAQYSR
                     NIQTGIAFIIGKAERCRVRVVASGSRAAGSDGIACEEKLAELLSESVVRIPPLRMQHE
                     DIPFLIQGIACNVAESQKIAPASFSEEALAALTRYDWPGNFDQLQSVVATLLLEADGQ
                     EIGAGAVSSLLGQNVPAEGAEDMVGGFNFNLPLRELREEVERRYFEYHIAQEGQNMSK
                     VAQKVGLERTHLYRKLKQLGIGVSRRAGEKTEE"
     gene            13593..14780
                     /gene="dprA"
                     /locus_tag="WIX18_000543"
     CDS             13593..14780
                     /gene="dprA"
                     /locus_tag="WIX18_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HEZ5237696.1"
                     /translation="MTEDERFAWLQLAFTPYIGAESFLLLLRRFGSASNALSAPAEQV
                     APAVRHKQAAEAWRNAEKRASARQAAEAALEWEMRDGCRLMLLQDEDFPEMLTQGLTA
                     PPVLFLRGNVRLLHKPSAAIVGSRHATPQAMRIAKDFGKSLGGQNIPVVSGMASGIDT
                     AAHQGALEAEGGTIAVWGTGIDRIYPPSNKNLAYEIAEKGLIVSEFPIGTRPYAGNFP
                     RRNRLIAALSQVTLVVEAALESGSLITAGLAAEMGREVMAVPGSIDNPHSKGCHKLIK
                     DGAKLVECLDDILNECPGLLQNTGASSYSINKDTPDTGSRAVQTAYAPPPAAKMPSEG
                     AAGGTAVGGILDKMGFDPIHPDVLAGQLAMPAADLYAALLELELDGSVAAMPGGRYQR
                     IRT"
     gene            14806..15267
                     /locus_tag="WIX18_000544"
     CDS             14806..15267
                     /locus_tag="WIX18_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 family protein"
                     /protein_id="HEZ5237697.1"
                     /translation="MTEVIAYLIEHFQDFDTCPPPEDLGMLLEEAGFDTMEIGNTLMM
                     MEVLLNSSEFSAEPADSGALRVYSKEETDNLPQEVMGLMQYLIEEKAVSCEQREIIIH
                     ALMHIPGDEITVDTAKVLTLLLLWANKSELPVLVGDELMSALLLDNKPTMN"
     gene            15339..17645
                     /gene="topA"
                     /locus_tag="WIX18_000545"
     CDS             15339..17645
                     /gene="topA"
                     /locus_tag="WIX18_000545"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HEZ5237698.1"
                     /translation="MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLVPKSGAV
                     DPDNGFAMKYQLISRNGKHVDAIVAGAKEAENIYLATDPDREGEAISWHLLEILKSKR
                     GLKNIKPQRVVFHEITKNAVLDAVAHPREIEMDLVDAQQARRALDYLVGFNLSPLLWK
                     KIRRGLSAGRVQSPALRLICERENEIRAFEAQEYWTVHLDSHKGRSKFTAKLAQYNGA
                     KLEQFDLPNEAAQADVLKELEGKEAVVTAIEKKKRSRNPAAPFTTSTMQQDAVRKLGF
                     TTDRTMRTAQQLYEGIDVGQGAIGLITYMRTDSVNLADEALTEIRHYIENKIGKEYLP
                     SAAKQYKTKSKNAQEAHEAIRPTSVYRTPESVKPFLSADQFKLYQMIWQRTVACQMTP
                     AKFDQTTVDITVGKGVFRVTGQVQTFAGFLSVYEESSDDEEGEDSKKLPEMSEGDKLP
                     VDKLYGEQHFTTPPPRYNEATLVKALEEYGIGRPSTYASIISTLKDREYVTLEQKRFM
                     PTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQLDEIADGKRQWIPLMDKFWKPFIKQVE
                     EKEGIERAKFTTQELDETCPKCGEHKLQIKFGKMGRFVACAGYPECSYTRNVNETAEE
                     AAERIAKAEAEQAELDGRECPKCGGRLVYKYSRTGSKFIGCANYPKCKHVEPLEKPKD
                     TGVQCPQCKKGNLVERKSRYGKLFYSCSTYPDCNYATWNPPVAETCPKCAWPVLTIKT
                     TKRWGVEKVCPQKECGWKEQIEPPAPKE"
     gene            complement(17723..17989)
                     /locus_tag="WIX18_000546"
     CDS             complement(17723..17989)
                     /locus_tag="WIX18_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003786399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HEZ5237699.1"
                     /translation="MASSEPFPCSACGLCCQKVNLSEQTIYLDRGDGTCRHFDDSTRL
                     CTIYETRPLVCRVEDYYHHYLSEQMSWQDFIQINIEVCKQFQSE"
     gene            complement(17989..18408)
                     /locus_tag="WIX18_000547"
     CDS             complement(17989..18408)
                     /locus_tag="WIX18_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237700.1"
                     /translation="MGKIQILNKLPTKNPATIPFDAASNSFFRILEARNEYKKIAAQE
                     KTKREVIGAWRDVRLAELKNQQEILRLYLENTFKERRKMIDGLFEALDKGMEAGNIHV
                     IDTAINGIVSIAKDSPLKQVDNLIAALKNDNVKVIDF"
     gene            complement(18408..19355)
                     /locus_tag="WIX18_000548"
     CDS             complement(18408..19355)
                     /locus_tag="WIX18_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237701.1"
                     /translation="MAIPVLLWGAAAALAATGIVKGAAALSDIDDAKEIGERAERRYK
                     RRRRELNSTKDETNLAFEELGQFKVDIFNNQIRHIVQVLNNTSNKHAKSELSGFNSTF
                     DIAELKEMETMVQTSLELSTNLGSSAITGALAGFGVYGAVPMIATASTGTAISTLSGA
                     AATNATLAWLGGGSLAAGGFGMAGGMVALGGIVAGPALAIGGFMLASKAEEALTEARA
                     YSAEIDEAIDEMDLITEGLEGLKENAREIRHTLEEMVKRFEKVRVDHADHPDFHTMLV
                     IGKAIKNLLNTPIMEEDGSPVANIRHQCEGCLNIELGTV"
     gene            19512..19889
                     /locus_tag="WIX18_000549"
     CDS             19512..19889
                     /locus_tag="WIX18_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ5237702.1"
                     /translation="METHEKIRLMRELNKWSQEDMAEKLAMSAGGYAKIERGETQLNI
                     PRLEQLAQIFKIDMWDLLKSGGGGMVFQINEGDSGGDIALYASGDVSMKIEFLKMELK
                     HCKEMLEQKDKEIELLRKLTETV"
     gene            19978..20547
                     /gene="rsmD"
                     /locus_tag="WIX18_000550"
     CDS             19978..20547
                     /gene="rsmD"
                     /locus_tag="WIX18_000550"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HEZ5237703.1"
                     /translation="MAAGKHTKHSNQVRIIGGQCRGRKLSFASANGLRPTPDSVREKL
                     FNWLGQDLTGKTVLDLFGGSGALGIEAASRNAKRVLISDNNRQTVQTLQKNSRELGLG
                     QVQIVCSDGIAYLKTVSEQFDVVFLDPPFAWQDWQILFDALKPCLNPRAFVYLEAGRL
                     PDIPDWLTEYREGKSGQSTFELRVFQVAE"
     gene            20670..20921
                     /locus_tag="WIX18_000551"
     CDS             20670..20921
                     /locus_tag="WIX18_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HEZ5237704.1"
                     /translation="MSLFITDECINCDVCEPECPNDAISQGEEIYEINPNLCTQCVGH
                     YDEPQCQQVCPVDCILIDEEHPETHDELMAKYEKIIQFK"
     gene            21018..21101
                     /locus_tag="WIX18_000552"
     tRNA            21018..21101
                     /locus_tag="WIX18_000552"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:21052..21054,aa:Tyr,seq:gta)
     gene            21132..21205
                     /locus_tag="WIX18_000553"
     tRNA            21132..21205
                     /locus_tag="WIX18_000553"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:21164..21166,aa:Gly,seq:tcc)
     gene            21215..21289
                     /locus_tag="WIX18_000554"
     tRNA            21215..21289
                     /locus_tag="WIX18_000554"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:21247..21249,aa:Thr,seq:ggt)
BASE COUNT         5303 a         5454 c         5774 g         4804 t
ORIGIN      
        1 gtactgtctg cggcttcgtc gccttgtcct gatttttgtt aatccactat ataaaataaa
       61 tgggcaaaaa tcggtttatt atcgtttttg ccgcatttgg atttgttcta ccgtaaaacg
      121 tgtttgacga acgggattct tattaaaaaa catctgattt ctaacaaaat cagtattttt
      181 tggcacgatg gctaaaattt ttccttccat ttcgccatca cgtgttttcc atgcgctcaa
      241 gaattgtgat ttgctcattg agacgtgccc cagcgatgga tcagccagca aaacagtttc
      301 tccgttaata ccgttcaata ccgaaaaatg gttgttttta cggtatttta aatacacaat
      361 tacaggaatt tttagttgta ccaactgttc aaatggcaaa gcataacctt gtgcttcaaa
      421 acccagttcg ggcattatgc gttgcatatc atcaaaagaa gcacgcattt gggttttatc
      481 cattttgtcc aagatttccg cttcagaata atgtctgcca taaaaattat tcagtaacgt
      541 ggcaatcgaa gccgcgccgc aagaaaaatc caaatcttgt tttactatgc cggaatctcg
      601 ccgtgctttc caactccgta catggatgtt ttggtaagaa gcggggtttt cagcaaatat
      661 agggtaagca aaaacaatat ttgggataaa gccaattaaa accgcatggt ttattaattt
      721 agaaatattt tttatcatag tatatatgcg tagaataaac gcatgaaaca taaaaaaata
      781 aaatcatatg caattttatt gcatgaataa atatgaataa aatagataat gatgggagta
      841 aatacgccat gtattttgga agtttaaatt tattaataat aaaataattt atcgtagcgc
      901 aaataaatcc caaaattgga acgattagaa aaaaaattaa tacacccatc atcatgcaaa
      961 ctctatatta ataaatagct aactaattct attgtggaaa ttagttagct aactaaaagt
     1021 tattaatgat tattttcgag aattgactgc attattagca gcattggccc caaaacctag
     1081 tgcatgaata cccggtctcc atgccaaatt tccagccaat ccgcctccgg cagcagcagc
     1141 cagccctgtt ttgccgctac tcctgttgcc gcaccgattc ctgccgcagt agccgcgcct
     1201 tgcgcagttc ctaatttacc atgattatac aaattagcac catgatactc ccatgcacct
     1261 aatgcaccgc caaaagcagc ggctgcaata atgggaacaa attcaccttg tgtttctttc
     1321 atttcagcct gtgataattg aattgctttc acattttggc tgtcaaaaac ttggctgtct
     1381 aaattttgcg ccattacagg tgtaatcatc atagccatta cagttgcaat tttcgttgcg
     1441 ctggtttgca cataaatagg attagcaaat tcgctttgat tgcgttcagt gttgatgtag
     1501 ctaatactgc tttctagttt gaatttaccc ttgtcagtca ataattcttc caaacttaaa
     1561 ggtaagtcag cataagcaat ttggctggca acagtcaaaa taaaatctat tagacatttg
     1621 tgtttttgca tcatttcgtt tgattttcta gtttttgaga atgatacaaa gttttttaca
     1681 aagtaaagag tcactctgaa aaacattttt tcattataaa tcaaaatatt gatagaataa
     1741 atagcgagca tcgattcacg gtgtacttta gtgcaaagcg tacaacgcga gcctgaacca
     1801 ccagccgcaa caggaaaaga aagccgatag agtgcaatgc ttgccaacgt gcaagcgagc
     1861 ttgcaagaac gcttggctca acgagagcag gcaagacaga aagcagaaag caggatagga
     1921 gcggtaacgc aaaggtctcg ggctttgatt tcgccgtaaa ccctgctgcc gccttgtccg
     1981 gaaagggtgc aggcggcgag tgccgacagg gtgcagatgg ggaggggggt tttcatttgg
     2041 ggtcgcaacg gaagtggtat gcgcagattt caaaaccgtt tttgaaatac aggcggtgcg
     2101 cgtcggcacg gtcgtggttg acgtggacgt tgaggtggat tttggttacc cctgtttccg
     2161 cgccgatttt gcggacttct tccaaaaggc gcgaggcgta gcctttgcgg cggctttgcg
     2221 gcagggtaac gatgtcatcg atgtggatgt ggcggccgcc ggcgagggtg caggcttcgc
     2281 ggaagccgca gacggcgacg gcgttgtgtt tgccttcttc aaaaatgccc agcaggcggt
     2341 agccttgggg gcgttggact ttgttgatct gttcggtaaa gcggttgatg tcggtcaggg
     2401 cggaacgcaa aacgctcaag gctgcaaagg cggtggcggt gtcgtccgcg ccgatttcgc
     2461 gcaaaacgta ggatgcgccc gagacggtct gttcctgtgc tttctcggcg gcgtgttttt
     2521 cttcgattgc ctgtgccagc aggacgcgct cgtcggtagg gtcgttttgt ccgccctgtt
     2581 cgcgttcttc gagcagggct ttgcagtcga tgacgcgcag gtcgttgtcg gcggcaaagt
     2641 ccatcaggaa gcggaacatc tgggggttgt cggtttccag ttttttatcg acggcgacgc
     2701 agcggatgtt gtccaccagc atggggcgca cccatttcga gtaggaaagc ctgttgtctt
     2761 tggtaaacga ggacagaatg ccgcacaggc gttccgccca gtcgctggga cggaaaatct
     2821 tgccggaact cgttgtgccg tggatgacga cttcgtaggg gttgcagact aacatggcgg
     2881 cttcctgaaa agaaatgtct ggcgcgatta tacctgatgc ttatgcgggc gtgtttggat
     2941 atgccgtctg aaaagtacgg gattcgtgcg gtaaaacttt gcggcggcaa atgtgcgata
     3001 atacgcgccg tattgccgct tttgcgaagc tgttccgcaa acactcgggc ggcgtggacg
     3061 tataaccgga tgcccgcctg acgcgggttt tttacggaag gggggcaaaa atgcctaatc
     3121 cgctttacag acagcacatc atctccattt cggatttgtc gcgcgaacag ttggaatgcc
     3181 tgcttcagac ggcattgaag ctgaaggcgc atccgcgcgg cgatttgttg gaaggcaaac
     3241 ttatcggttc gtgctttttc gagccgtcca cgcgcacgag gctgtcgttt gaaacggcgg
     3301 tgcagcggct gggcggcaag gtcatcggct tttcggacgg cgcgaatacc agtgccaaaa
     3361 aaggcgagac gcttgccgat accgcccgca tcatttccgg ctacaccgac gcaatcatcc
     3421 aacgccaccc caaagacggc gcggcgcgcg tggcggcgga gttttcgcgc gtccccgtca
     3481 tcaacgccgg cgacggcacg aaccagcatc ccagccagac tttgttggat ctggtaacga
     3541 tttatgaaac gcaggggcgt ttggacaagc tcaaaatcgc catggcgggc gacttgaaat
     3601 acgggcgcac cgtgcattcg ctttgtcagg cgttgaaacg ctggggctgc gaatttgcct
     3661 ttgtttcgcc gcccagcctc gcgatgcccg actacattac cgaagagttg gacgaagccg
     3721 gctgccgata ccgtatcctc ggcagtttgg aagaggcggc ggaatgggcg gacatcctgt
     3781 atatgacccg cgtccagcgc gaacgtttcg atgaacagga atttgccaaa atccaaggca
     3841 aattcaacct cgaagcgtct atgctcgccc acgccaaacc gaacctgcgc gtgctgcacc
     3901 ctttgccgcg cgtggacgaa atccatcccg atgtcgatgc cacgccgcat gcctattatt
     3961 tcgagcaggc aaccaacggc gtttatgcgc gtatggcgat attgtcgctg gtgttgaacg
     4021 aagaagtgtg aggaaccgat atggaaaccc cgaaactcag tgtcgaagcc attgaaaaag
     4081 gtacggttat cgaccatatt cccgctggca gggggctgac catcctgcgc cagttcaaac
     4141 ttttgcacta cggcaacgca gtaaccgtgg gcttcaacct gcccagcaaa acccaaggca
     4201 gcaaagacat catcaaaatc aaaggcgtgt gcttggacga caaagccgcc gaccgccttg
     4261 ccctgtttgc acccgaagca gtggtcaaca ccatcgacaa tttcaaggtt gtgcagaaac
     4321 ggcatttgaa cctgcccgac gaaatcgccg aagtgttccg ctgtccgaac acgaattgcg
     4381 ccggccacgg cgagccggtc aaaagccggt tttatgttaa aaaacacaac gggcagacgc
     4441 ggctgaaatg ccattactgc gaaaaaacct acagccggga ttcggtggcg gaagcctgac
     4501 ggattccctt aaaccgagcg ggcggcattt cgtctgccgc ttgttttgcc aatctgaaat
     4561 ggaatgatga tgcacgcttc tgtccaaagc cgtttcgcac cgatacttta tgttttgatt
     4621 ttctttgccg gttttttgac cgcgcaaatc tggttcaatc agaaagccta tactgaagag
     4681 ctgcctccgc ttctgtccgc attgtccgct gtcgcgctgg tgtggctggc gtgggcgttc
     4741 gtgtcggcgc gttcaaaggc taaggcggaa aagttctacc gcgaaaaaat gatacagaac
     4801 gaaagcatac accccgtcct gcacgcttct ttgcaacact tggaacacaa gccgcaaatg
     4861 ctcgccctgc tggtcaaaaa ccacggcaaa gggatggcgg aacaggtcag gttcaaggcg
     4921 gaagtgctgc ccgacgacga agacgcgcgc acgattgccg ccgagttggc aaaaatggat
     4981 atgtttgcat tggggacgga cgcggtcgcc tcgggcgaaa cctatggacg cgtgttcgcc
     5041 gatattttcg agttgtcggc ggctttggaa gggcgcgcgt tcaaaggaat gttgaaactg
     5101 acggcggaat ataaaaacat cttcggcgat gcctgccgtt cggaaacggc gttggagttg
     5161 ggcgcgctca atcaggcgtt gcaggagatt tcaaaaacat cggaaaagtc caaacggata
     5221 ttttattgaa gatggaaaaa tgccgtctga aacggaaggt gtttcagacg gcatttttgt
     5281 cggatgatta attattcgga gcggttgaag ccaaacttca cgcggctgcg gccctgatcc
     5341 ggtatattgt ccaaatcgcg tcccggattg gcggcggtgt cgcctacgga aatatcggag
     5401 atgttttcca aaatgatggc ggacgacagg tgttcggagg tgcggtaaac cattgccaag
     5461 cccacttctt cggcaggagt ggaaatcagc tcgacggtat ccctgctttt gaaattgttg
     5521 gagaggtcga cctgcatcgt tttcttgcgt ttgtagaggc tcaaaaccgt gcctttgtcc
     5581 aaaccgtccg cctcgccttt gtcgatggtg atggtttgaa actggccggc aatccttgtg
     5641 ccttcaaaca cggaaacgat tttagcctga accgggcggg acggttcgtg cggcatcatg
     5701 ttgaagcggt cggtgtcttc cggcattttc atcaggtagt cgccctgctg tatttcggaa
     5761 atggcggttt cgaccaccag cggctgtatc gaaggggtgc gcagcggggt aatcaaagga
     5821 tgggtgcggg tatggtattc gttgtctttc agccgttctc cagcctgttt cgagcgttgt
     5881 tcgagggcgg agtcggtata gtcgagggag cgcacgatgc cgctgaatgc gacttcctgc
     5941 ccgaggaatt tacccgtatc cggatcggtg atgtttttat tgattcggta ggtcaggtag
     6001 cggcccggct ctttcaggcc tttggtgtaa accctggtgc ctttggtgta cagcagcctg
     6061 ccttccgggc ccgagagcag gcgcggcgcg gcagcggttt ctttgcggga aacgatttgc
     6121 ggatgccgca taaagatgcg gtagaagttg acatcgatgg cgggaatacc gtatccggac
     6181 acttccttat ccggactcat tttgacgacg gggatgccgt ctgtctgttc caagccgagg
     6241 cgcggttcgc cgtcaacgtg gcgcaacacc aatacctggt ccggataaat caggtcggga
     6301 ttgtggattt gatcccggtt cgcgtcccac aggcggctcc attgccacgg gctgtacagg
     6361 tatttgcccg aaatgcccca cagggtgtcg ccctgtttga ccgtgtagcg ttccggcgcg
     6421 ttcgggcgca cctccaaatt tgccgccaaa gtttgtgttg agaatgccat acctgccgcg
     6481 cagagcaggg ttataatacg acgttgcata accgttcccc ttatctgata aatttcggtt
     6541 tgtcttgctt gattgggttg gaaaaagcgg cggcagcccc tcgggatgtg ccgcgtgata
     6601 aaaaatgttc cgcattttaa catcgaatta tccgcaccat cacggtaatt atgaaaaaca
     6661 ggcggcgtat ccgccgaagg aaagagaaaa ttatggcttt attgaatatc ttgcaatatc
     6721 ccgacgagcg tctgcacacg gtggcaaagc ctgtcgaaca agtcgacgag cgcatccgga
     6781 agctgattgc cgatatgttt gaaacgatgt acgaatcgcg cggcatcggg ctggcggcga
     6841 cgcaggtcga tgtgcacgag cgcgtggtcg tgatggattt gaccgaagac cgcagcgaac
     6901 cgcgcgtgtt catcaacccc gtcatcgttg aaaaagacgg cgaaaccact tacgaagagg
     6961 gctgcctgtc cgtgccgggc atttacgaca ccgtaacccg cgccgaacgc gtcaaggtcg
     7021 aggctttgaa cgaaaaaggc gaaaagttca cgctggaggc ggacggcttg ctggcgattt
     7081 gcgtgcagca cgagttggac cacctgatgg gcatcgtgtt tgtcgaacgc ctgtcgcagc
     7141 tcaagcaggg acgcatcaaa accaagctga aaaaacgtca gaaacatacg atttgaccct
     7201 tttgccgtgc cgtctgaacg ctgcaaagtt ttcagacggc acggtcttgt ccgacaacct
     7261 tacgcatacg caggaatatg ctatgaaagt catctttgcc ggcacgcccg attttgccgc
     7321 cgccgcctta aaagccgttg ccgccgccgg ttttgaaatc ccgctggtgc tgacccagcc
     7381 cgaccgtccg aaagggcgcg gtatgcaact gaccgccccg cccgtcaaac aagccgcgct
     7441 ggaactcggt ttgcgcgtgg cacagcccga aaaactgcgt aacaacgccg aagccctgca
     7501 aatgctcaaa gaggtcgagg cagacgtaat ggtggttgcc gcctacggtt tgattctgcc
     7561 gcaggaagtg ttggatacgc cgaaacacgg ctgcctcaac atccacgctt cgctgttacc
     7621 ccgttggcgt ggcgcggcgc cgattcaacg cgcgattgaa gccggcgatg ccgagacagg
     7681 cgtgtgtatt atgcagatgg acatcggttt ggacaccggc gatgtggtca gcgaacaccg
     7741 ctacgccatc caaccgaccg ataccgccaa cgaagtccac gacgcgctga tggaaatcgg
     7801 tgcggcggcg gttgttgccg atttgcaaca gcttcaaagc aaaggccgtc tgaacgcggt
     7861 caaacagccc gaagaaggtg ttacttacgc ccaaaaacta agcaaagaag aggcgcgtat
     7921 cgattggagc gaaagcgcgg cggttatcga acgcaaaatc cgcgccttca accccgtgcc
     7981 tgccgcgtgg gttgagtatc agggcaagcc gatgaaaatc cggcgggcgg aagtggtggc
     8041 gcaacaaggc gcggcaggcg aagtgttgtc ctgttcggcg gacggtttgg tcgttgcctg
     8101 cggcgaaaac gcgctgaaga ttaccgaatt gcagcctgcc ggcggcaggc gtatgaatat
     8161 cgcggcgttt gcggcgggac ggcatatcga agcagggacg aagctgtaaa tcccttcaga
     8221 cggcattccg atccgcaaac gggaatgccg tctgaaacca tcagttgaag aaagcgaatc
     8281 acataatatg agtatggcac ttgcccaaaa acttgccgcc gacagcattg cggcggttgc
     8341 cgaaggacgc aaccttcagg acgtgttggc gcaaatccgc accgcgcatc ccgaccttat
     8401 ggcgcaggaa aacggcgcgt tgcaggacat cgcctacggc tgccagcgtt atttgggcag
     8461 tttgaaacat atgctcgcgc agatgctgaa aaagccgatt ggcaatccgc agctcgaaag
     8521 cctgcttttg gcggcgttgt accagctgca ttacacgcgc aacgcgcccc acgccgtggt
     8581 caatgaggcg gtggaaagca tcgcgaaaat cggacgcggg cagtaccgtt cgtttgccaa
     8641 cgcggttttg cgccgctttt tgcgcgaacg cgacaagctt gtggcttcct gtaaaaaaga
     8701 cgatgtagcg aaacacaacc tgccgctgtg gtgggtggct tacttgaaaa accattatcc
     8761 gaaacactgg cacaacatcg ccgccgcgct gcaatcccat ccgccgatga ctttgcgcgt
     8821 caaccgccga cacggcaatg ccgaaagcta tttggaaaaa ctggtggcgg aaggtatcgc
     8881 ggctaaggcg ttggacgaat atgcggttac gttggaagaa gccgtgccgg tgaaccgcct
     8941 gcctggtttt tcagacggca ttgtttcggt acaggacttc ggcgcgcagc aggcggcgta
     9001 tttgttaaac ccgaaagacg gcgaacggat tttggacgcg tgcgccgcgc cgggcggcaa
     9061 gacggggcat atcttggaac tggcggattg ccgtgttacc gccttggaca ttgatgcagg
     9121 ccgtctgaaa cgggtggaag acaatatcgc gcgtctgggc tttcagacgg catcgacggc
     9181 gtgtgccgat gcacaggacc tgtcggcatg gtatgatggg aaaccgtttg atgccgtcct
     9241 tgccgacgtg ccgtgtaccg cctcgggcgt ggcgcggcgc aatcccgacg tgaaatggct
     9301 acgccgtccg accgacgcgc tcaaaaccgc ccgccagcag gaagccctgc tagatgcatt
     9361 gtggcaggtg ctgaaaagcg ggggaaggat gttgatcgct acctgttccg tgttcgtcga
     9421 ggaaaacgac ggacaattgc aaaaattcct caaccgccat gccgatgcag aactgatcga
     9481 atcgcgggtg cttttaccga acaaacacca agatggcttt tattacgcgc ttattcaaaa
     9541 gcattaaaca atggcttgtg ctgctgccga tgctttccgt tttgccggac gcggcggcgg
     9601 aggggataga tgtgagccgc gccgaagcga ggataaccga cggcgggcag ctttccatca
     9661 gcagccgctt ccaaaccgag ctgcccgacc agctccaaca ggcgttgcgc cggggcgtgc
     9721 cgctcaactt taccttaagc tggcagcttt ccgccccgat aatcgcttct tatcggttta
     9781 aattggggca actgattggc gatgacgaca atattgacta caaactgagt ttccatccgc
     9841 tgaccaaccg ctaccgcgtt accgtcggcg cgttttcgac agactacgac accttggatg
     9901 cggcattgcg cgcgaccggc gcggttgcca actggaaagt cctgaacaaa ggcgcgctgt
     9961 ccggtgcgga agcaggggaa accaaggcgg aaatccgcct gacgctgtcc acttcaaaac
    10021 tgcccaagcc ttttcaaatc aatgcattga cttctcaaaa ctggcatttg gattcgggtt
    10081 ggaaacctct aaacatcatc gggaacaaat aatgcgccgt tttctaccga tcgcagccat
    10141 atgcgccgtc gtcctgttgt acggactgac ggcggcaacc ggcagcacca gttcgctggc
    10201 ggattatttc tggtggattg ttgcgttcag cgcaatgctg ctgctggtgt tgtccgccgt
    10261 tttggcacgt tatgtcatat tgctgttgaa agacaggcgc gacggcgtat tcggttcgca
    10321 gattgccaaa cgcctttccg ggatgtttac gctggttgcc gtactgcccg gcgtgtttct
    10381 gttcggcgtt tccgcacagt tcatcaacgg cacgattaat tcgtggttcg gcaacgatac
    10441 ccacgaggcg cttgaacgca gcctcaattt gagcaagtcc gcattgaatc tggcggcaga
    10501 caacgccctc ggcaacgccg tccccgtgca gatagacctc atcggcgcgg cttccctgcc
    10561 cggggatatg ggcagggtgc tggaacatta cgccggcagc ggttttgccc agcttgccct
    10621 gtacaatgcc gcaagcggca aaatcgaaaa aagcatcaac ccgcacaagc tcgatcagcc
    10681 gtttccaggt aaggcgcgtt gggaaaaaat ccaacgggcg ggttcggtca gggatttgga
    10741 aagcataggc ggcgtattgt acgcgcaggg ctggctgtcg gcgggtacgc acaacgggcg
    10801 cgattacgcc ttgtttttcc gtcagccggt tcccaaaggc gtggcagagg atgccgtctt
    10861 aatcgaaaag gcaagggcga aatatgctga gttgagttac agcaaaaaag gtttgcagac
    10921 ctttttcctg gcaaccctgc tgattgcctc gctgctgtcg atttttcttg cactggtcat
    10981 ggcactgtat ttcgcccgcc gtttcgtcga acccgtccta tcgcttgccg agggggcgaa
    11041 ggcggtggcg caaggcgatt tcagccaaac ccgtcctgtt ttacgcaatg acgagttcgg
    11101 gcgtttgacc aagttgttca accacatgac cgagcagctt tccatcgcca aagaagcaga
    11161 cgagcgcaac cgccggcgcg aggaagccgc cagacattat cttgaatgcg tgttggaggg
    11221 gctgaccacg ggcgtggtgg tgtttgacga acaaggctgt ctgaaaacct tcaacaaagc
    11281 ggcggaacag attttgggga tgccgcttac ccccctgtgg ggcagcagcc ggcacggttg
    11341 gcacggcgtt tcggcgcagc agtccctgct tgccgaagtg tttgccgcca tcggcgcagc
    11401 ggcaggtacg gacaaaccgg tccatgtgaa atatgccgcg ccggacgatg ccaaaatcct
    11461 gctgggcaag gcaaccatcc tgcccgaaga caacggcaac ggcgtggtaa tggtgattga
    11521 cgacatcacc gttttgatac acgcgcaaaa agaagccgcg tggggcgaag tggcaaaacg
    11581 gctggcacac gaaatccgca atccgctcac gcccatccag ctttccgccg aacgtctggc
    11641 gtggaaattg ggcgggaagc tggatgagca ggatgcacaa atcctgacgc gttcgaccga
    11701 caccatcgtc aaacaggtgg cggcattgaa ggaaatggtc gaagcattcc gcaattatgc
    11761 gcgttcccct tcgctcaaat tggaaaatca ggatttgaac gccttaatcg gcgatgtgtt
    11821 ggcattgtat gaagccggtc cgtgccggtt tgcggcggag cttgccggcg aaccgctgat
    11881 ggtggcggcg gatacgaccg ccatgcggca ggtgctgcac aatattttca aaaatgccgc
    11941 cgaagcggcg gaagaagccg atgtacccga agtcagggta aaatcggaag tggggcggga
    12001 cggtcggatt gtcctgacgg tttgcgacaa cggcaaaggg ttcggcaggg aaatgctgca
    12061 caacgccttc gagccgtatg taacggacaa accggcggga acgggattgg gtctgcccgt
    12121 ggtgaaaaaa atcattgaag aacacggcgg ccgcatcagc ctgagcaatc aggatgcggg
    12181 tggggcgtgt gtcagaatca tcttgccaaa aacggtaaaa acttatgcgt agcagcgata
    12241 ttttaattgt agacgacgaa atcggcatcc gcgacctgct gtcggaaatc ctgcaggacg
    12301 aaggttattc ggtcgcattg gcggaaaacg ccgaagaggc gcgcaagctg cgccatcagg
    12361 cgcgtccggc gatggtgctg ctggatattt ggatgcccga ttgcgacggc atcacccttt
    12421 tgaaggagtg ggcgaaaaac gggcagctta atatgccggt cgtcatgatg agcgggcatg
    12481 ccagcattga cacagcagtg gaagccacca aaatcggtgc gctcgacttt ttggaaaaac
    12541 cgatctccct gcaaaaactg ctgtctgccg tcgaaaacgc gttgaagtac ggtgcggcgc
    12601 aaaccgaaac ggggcctgta ttcgacaagc tgggcaacag tgcggcgatt caggagatga
    12661 accgcgaagt cgaagcggcg gcaaagcgca cgtcccctgt atttttgacg ggtgaggtgg
    12721 gttcgccgtt tgaaaccgta gcgcgctatt tccataaaaa cggtacgccg tgggtcagtc
    12781 cggcaagggt cgaatatctg atcgatatgc cgacggaact gttgcagaaa gctgaaggcg
    12841 gtgttttata tgtgggcgat attgcccaat acagccgcaa tatccaaacc ggcattgcct
    12901 ttatcatcgg caaggcagaa cgctgccgcg tcagggtggt cgcatcgggc agcagggcgg
    12961 caggttcaga cggcattgcc tgcgaggaaa agctggcgga actgctgtcg gaatcggtcg
    13021 tccgtattcc gccgctgcgt atgcagcatg aagacattcc cttcctgata caggggattg
    13081 cctgcaatgt ggcggaaagc caaaagattg cgcctgcctc attcagtgaa gaggcacttg
    13141 ccgcattgac ccgttacgac tggccgggaa atttcgacca actgcaaagc gtcgttgcaa
    13201 cgctgttgtt ggaggcggac ggacaggaaa tcggcgcagg ggcggtttct tcccttttgg
    13261 ggcagaatgt gcctgccgag ggagcggaag atatggtggg cgggtttaat ttcaacctgc
    13321 ccctgcgcga attgagggag gaggtggagc ggcgttattt cgagtaccac atcgcccaag
    13381 aaggtcagaa tatgagcaaa gtggcgcaga aagtcggttt ggaacgcacg cacctttacc
    13441 gcaaactcaa acagctcggc atcggcgttt cgcgccgggc gggggaaaaa accgaagaat
    13501 aggcccggac ggccggtttt ccggctgcgg gcttttgttt tcagacggca tttggtgcaa
    13561 atgccgtctg aaatcgtaag gggacggatt ttatgacaga ggacgaacgt ttcgcgtggc
    13621 tgcaattggc gtttacgccc tatatcggcg cggaaagctt cctgctgctg ctgcgccgtt
    13681 tcggcagcgc gtcaaacgcc ctgtccgcac cggcggaaca ggtcgccccg gcggtgcggc
    13741 acaagcaggc ggccgaggct tggcgcaatg cggaaaaacg cgcctcggcg cggcaggcgg
    13801 cagaagcggc gttggaatgg gaaatgcggg acggatgccg tctgatgctg cttcaggatg
    13861 aagatttccc cgaaatgctg acgcaggggc tgaccgcgcc gccggttttg tttttgcgcg
    13921 gcaacgtgcg gctgctgcac aagccttccg ccgccatcgt cggcagccgc catgccacgc
    13981 cgcaggcgat gcggattgcc aaagatttcg gcaagtcgtt gggcgggcaa aatatccccg
    14041 ttgtgtcggg tatggcttcc ggtatcgata ctgccgccca tcagggcgca ctggaggcag
    14101 aaggcggcac catcgccgtg tgggggacgg gtatagaccg catttacccg ccgtccaata
    14161 aaaaccttgc ctatgaaatc gccgaaaaag gattgattgt cagcgagttt cccatcggta
    14221 cgcgcccgta tgccggcaac tttccgcgcc gcaaccgcct gattgccgcg ctgtcgcagg
    14281 ttacgctggt ggttgaagct gcgttggaat ccggttcgct gattaccgcc ggcttggcgg
    14341 cagaaatggg gcgcgaagtg atggcggtac ccggttcgat agacaatccg cacagcaaag
    14401 gctgccacaa actgattaaa gacggcgcga aattggtgga atgcctggac gacatcctga
    14461 acgaatgccc ggggctattg caaaatacgg gtgcttcatc atattctata aataaggata
    14521 cgcccgacac gggcagtcgc gccgttcaga cggcatacgc cccgccgcct gccgcaaaaa
    14581 tgccgtctga aggggcggca ggcggcacag ccgtcggcgg catactggat aaaatgggtt
    14641 tcgaccccat ccatcccgac gtgcttgccg gacagttggc tatgcctgcc gcagatttgt
    14701 atgccgcact gttggaattg gaattggacg gcagcgttgc cgcaatgccc ggcggcagat
    14761 accagcgtat ccgaacttga acgcacttta tattaaggaa cacgaatgac cgaagtcatc
    14821 gcctacctca tcgaacattt ccaagatttc gatacctgtc cgccgcccga agacttgggt
    14881 atgctgcttg aagaagcggg tttcgatacg atggaaatcg gcaacaccct gatgatgatg
    14941 gaagtattgc tcaacagctc cgaattttcc gccgaacctg ccgacagcgg cgcattgcgc
    15001 gtgtacagca aagaagaaac cgacaacctg ccgcaggaag tgatggggct gatgcagtat
    15061 ctgattgaag aaaaagccgt cagctgcgaa cagcgggaaa tcatcatcca cgcgctcatg
    15121 cacattccgg gcgacgaaat taccgtagat accgccaaag tgctgaccct gctgctttta
    15181 tgggcaaaca agagcgagct gcccgtgttg gtcggcgacg agctgatgag cgcgctttta
    15241 ctcgacaaca aacccacgat gaactgaagc ggcttcagac ggcccgcccg agtccgtctg
    15301 aaacgtcggc atcaaaacca ccatccagag aacgacaaat ggcgaaaaac ctattaatcg
    15361 tcgaatcccc gtccaaagcc aaaaccctga aaaaatattt gggcggcgat tttgaaatcc
    15421 ttgcatccta cggacacgtc cgcgacctcg tccccaaaag cggcgcggtc gatcccgaca
    15481 acggctttgc gatgaaatac caactcatca gccgcaacgg caaacacgtc gatgccatcg
    15541 tcgccggagc caaagaagcc gaaaacatct acctcgccac cgacccggat agggaaggcg
    15601 aagcgatttc ttggcatctt ttggaaatcc tcaaatccaa acgcggcctg aaaaacatca
    15661 agccgcagcg tgtcgtgttc cacgaaatca ccaaaaacgc cgtgctcgat gccgttgccc
    15721 atccgcgcga aatcgaaatg gacttggtcg atgcgcaaca agcccgtcgc gctttggact
    15781 atttggtcgg ctttaacctt tcgccattgt tatggaaaaa aatccgccgc ggtttgagcg
    15841 cgggtcgtgt gcaaagtccc gctttgcgcc tgatttgtga gcgtgaaaac gaaatccgcg
    15901 cgtttgaagc gcaggaatat tggacggtgc atctcgacag ccacaaaggc cgcagcaagt
    15961 ttaccgccaa actcgcccaa tacaacggcg cgaaactcga acaattcgac ctgccgaacg
    16021 aagccgcgca agccgacgtg ttgaaagaac tcgaaggcaa agaggccgtc gttaccgcca
    16081 ttgaaaagaa aaagcgcagc cgcaatcccg ccgcgccgtt caccacttct accatgcagc
    16141 aggatgccgt gcgcaaactc ggcttcacca ccgaccgcac catgcgtacc gcccaacagc
    16201 tttatgaagg tatagacgta gggcagggcg cgatcggtct gattacctat atgcgtaccg
    16261 acagcgtgaa tttggcggat gaagccttaa ccgaaatccg ccattacatc gaaaacaaaa
    16321 tcggcaaaga atatctgccg agtgccgcca aacaatacaa aaccaaatcc aaaaacgccc
    16381 aagaagcgca cgaagccatc cgcccgactt ccgtgtaccg cacgcccgaa agcgtcaaac
    16441 ccttcctgag cgcagaccag ttcaaactct atcaaatgat ttggcagcgt accgtcgcct
    16501 gtcagatgac gcccgccaaa ttcgaccaaa ccaccgtcga tattaccgtc ggcaaaggcg
    16561 tattccgcgt aaccggacaa gtgcagactt tcgcaggctt cctcagcgtt tacgaagaaa
    16621 gcagcgacga tgaagaaggc gaagacagca aaaaactgcc cgaaatgagc gaaggcgaca
    16681 aattgcccgt ggacaaactc tacggcgaac aacactttac cactccgccg ccacgctaca
    16741 acgaagccac gctggttaaa gccctcgaag aatacggcat cggccgcccc tcgacctacg
    16801 ccagcatcat ctccacgctc aaagaccgcg aatacgttac ccttgagcaa aaacgcttca
    16861 tgcccaccga cacaggcgac atcgtcaata aattcctgac cgaacacttc gcccaatacg
    16921 tcgattacca cttcactgcc aaactcgaag accagcttga cgaaattgcc gacggcaaac
    16981 gccaatggat tcccttgatg gacaaattct ggaaaccgtt catcaaacaa gtggaagaaa
    17041 aagaaggcat cgaacgcgcc aaatttacca cgcaggaact tgacgaaacc tgccccaaat
    17101 gcggcgaaca caaactgcaa atcaagttcg gcaaaatggg tcgcttcgtt gcctgcgccg
    17161 gttatccaga gtgcagctac acccgcaacg tcaacgaaac tgccgaagaa gccgccgagc
    17221 gcatcgccaa agccgaagca gagcaagccg aacttgacgg gcgcgaatgc cccaaatgcg
    17281 gaggacggct ggtgtacaaa tacagccgaa ccggcagcaa attcatcggc tgcgccaact
    17341 atccgaaatg caaacacgtc gagccgttgg aaaaaccgaa agacaccggc gtccaatgcc
    17401 cgcaatgcaa aaaaggcaac ctcgtcgagc gcaaatcccg ctacggcaaa ctgttttaca
    17461 gttgcagcac ctatcccgac tgcaactacg ccacctggaa cccgcccgtt gcagaaacct
    17521 gtccaaaatg cgcgtggccg gttttgacca tcaaaaccac caaacgctgg ggtgtggaaa
    17581 aagtctgccc gcaaaaagaa tgcggctgga aagaacagat tgaaccgcct gcaccgaaag
    17641 agtgaagcgg ttggggttga gatgaaagaa aatgccgtct gaaaggggtt tcagacggca
    17701 ttttcttcat gtgaaaacaa acctactcag attgaaactg tttacacact tctatattaa
    17761 tctgtataaa gtcctgccac gacatttgtt ctgataagta atggtgataa tagtcctcca
    17821 cacgacagac caaagggcgc gtttcataga tagtgcataa gcgcgttgaa tcatcgaaat
    17881 ggcggcaggt accatctccc cgatccaggt atatggtttg ttcgcttaaa ttgacctttt
    17941 gacagcacaa accgcaagca gagcatggga agggttctga tgaggcaatc aaaaatcgat
    18001 tactttcaca ttgtcgtttt tcaaagctgc aatcagattg tccacctgtt tcagtggaga
    18061 atctttggca atgctcacaa tgccgttaat tgctgtatca atgacgtgga tatttcccgc
    18121 ttccattcct ttgtccaatg cctcaaataa accgtcaatc attttgcgac gttctttgaa
    18181 cgtattttcc agatacaagc gcaaaatttc ttgttggttt ttcaattctg ctaatcggac
    18241 atcacgccat gcaccaatga cttcacgttt ggttttctct tgtgcagcaa ttttcttata
    18301 ttcgttgcgt gcttctaaga tgcgaaaaaa cgaattagaa gctgcatcaa acggaatggt
    18361 tgctggattc tttgttggta gcttattaag gatttggatt tttcccatta tactgtacct
    18421 aattcgatat tcagacaacc ttcgcattga tgacggatat tggctacagg agatccgtcc
    18481 tcttccataa taggcgtatt cagcagattt ttaatcgcct tgccgatgac cagcatggta
    18541 tggaaatcag gatggtcggc atggtcgaca cgaacctttt cgaaacgttt aaccatttct
    18601 tctaaggtat ggcgtatttc ccttgcgttt tccttcaacc cttctaatcc ttctgtaatt
    18661 aaatccatct cgtcaatagc ctcatcgatt tcagcactat atgctcgtgc ttccgtcagt
    18721 gcctcttccg ccttgcttgc cagcataaat ccaccgattg ctaaagcagg tcctgccacg
    18781 atgccaccca aagccaccat gccgcctgcc ataccgaatc cacctgctgc caatgagcca
    18841 cctccgagcc aagcaagggt tgcattggtt gccgcagcac ctgaaagggt ggagattgct
    18901 gttcctgtgg aagcagttgc aatcataggt actgcaccgt atacgccaaa gcctgccagt
    18961 gcgccagtaa tggcactact gccgagattg gtgcttaact ctaaagaagt ttgcaccata
    19021 gtttccattt cttttaattc agcaatatca aatgtactgt taaaacccga cagttcgctt
    19081 ttcgcatgct tgttgctggt gttgtttagg acttgaacaa tatgtctgat ttgattgtta
    19141 aaaatatcaa ccttaaactg tcccagctcc tcaaaagcaa ggttggtttc gtctttagtc
    19201 gaattcaatt ctcttctcct gcgtttataa cggcgttctg cacgctcacc tatttctttt
    19261 gcatcatcta tatcgctgag tgcagctgct cctttgacaa tacctgttgc agcaagggcg
    19321 gcggctgcac cccaaagtaa aactggaata gccatgtgta atttcctaaa gtgtataaaa
    19381 agttaaaaat cttgaagttt caatgtgtat tgtaatttta aaattctatt aaaaatacat
    19441 ttgccattcc agcaaactaa agtttaaaat ctatccaaat aatttaacca tctatacaga
    19501 aagttcagct catggaaacc cacgaaaaaa tccgcctgat gcgcgaattg aacaaatggt
    19561 cgcaggagga tatggcggaa aagctggcga tgtcggcagg cgggtatgcc aaaatcgaac
    19621 ggggcgaaac gcagttgaat atcccgcgtt tggagcagtt ggctcagatt ttcaaaatcg
    19681 atatgtggga cttgctcaaa tcgggcggcg gcgggatggt gtttcagatt aatgaaggtg
    19741 atagtggtgg cgatattgcg ttgtatgcgt caggtgatgt ttcgatgaaa atagaatttt
    19801 taaaaatgga gttgaaacat tgtaaagaaa tgttggaaca aaaagacaaa gaaatcgagt
    19861 tgctccgcaa gctgaccgaa accgtttaaa cagatatgcc gtctgaaaaa agttttcaga
    19921 cggcatattc tttgacaggt cttgtataat accgtttgaa cttacaggtt tttgattatg
    19981 gcggcaggca aacataccaa acacagcaac caggtacgca ttatcggcgg gcaatgtcgg
    20041 ggcaggaaat tgagttttgc atccgccaac ggactgcgtc caacccccga tagcgtgcgt
    20101 gaaaagctgt ttaactggct gggacaggat ttgacgggta aaacggtttt ggatctcttc
    20161 ggaggcagcg gcgcactcgg tatagaagcc gcttcgcgca acgccaaacg cgtgctgatt
    20221 tcggataaca accgccaaac cgtgcagacc ttgcagaaaa acagtcgcga actgggtttg
    20281 gggcaggtgc aaatcgtctg ttcagacggc atcgcatatt tgaagaccgt atccgaacag
    20341 tttgatgtcg tctttctcga cccgccgttt gcatggcagg actggcaaat cctgttcgat
    20401 gccttgaagc cgtgcctgaa cccccgggca ttcgtctatc tcgaggcggg taggctgccg
    20461 gatatccccg attggctgac ggaatataga gaagggaaat cagggcagag tacattcgaa
    20521 ttaagggttt tccaagtggc tgaataatat gcgctttgat aatcatttcc gagttgtaaa
    20581 cattcgtttg caaccgtccg gttcaaaaaa accttgtgct ataatccgcg cccgcccggt
    20641 tttgataatt tagtggaaaa ggaaaagaaa tgtcgctttt tattaccgac gagtgcatca
    20701 actgcgacgt atgcgaaccc gaatgcccca atgatgccat ttcccaaggc gaggaaattt
    20761 acgaaatcaa ccccaacctc tgcacgcagt gcgtcggaca ctacgatgag ccgcagtgcc
    20821 agcaggtttg cccggtggac tgcatcctga ttgacgaaga acatcccgaa acccatgacg
    20881 agttgatggc gaaatacgaa aagattatcc agtttaaata aattcttttt aaaacatcaa
    20941 attatgtctg ttttgaaata aaatcaaaaa aaaacttgac ggaaaagcaa gccgctaata
    21001 aactaacgtt ctcttttgga gggattcccg agcggtcaaa gggggcagac tgtaaatctg
    21061 ttgcgaaagc ttcgaaggtt cgaatccttc tccctccacc aaaattctta cttggggcag
    21121 tagcgagtaa tgcgggtgta gctcaatggt agagcagaag ccttccaagc ttacggtgag
    21181 ggttcgattc ccttcacccg ctccaaacaa ttaggcccat gtagctcagg ggtagagcac
    21241 tcccttggta agggagaggc cggcagttca aatctgccca tgggcaccat ctctcgatta
    21301 ttcatttctt taaggcttag atatatagga tattg
//
LOCUS       DAWITQ010000017        21291 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.017, whole genome shotgun sequence.
ACCESSION   DAWITQ010000017 DAWITQ010000000
VERSION     DAWITQ010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21291)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21291)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21291
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.017"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(134..469)
                     /locus_tag="WIX18_000555"
     CDS             complement(134..469)
                     /locus_tag="WIX18_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEZ5237705.1"
                     /translation="MFKDWKEHTALVKKSFGELGKAHPKMLQAYGALEQAAAAEALDA
                     KTRELIAIAVAITTRCESCISVHAAAAAKAGATDSEIAGALATAIALNAGAAYTYALR
                     ALEAVETQK"
     gene            598..1504
                     /gene="mtrA"
                     /locus_tag="WIX18_000556"
                     /pseudo
     CDS             598..1504
                     /gene="mtrA"
                     /locus_tag="WIX18_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689713.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter MtrCDE transcriptional
                     activator MtrA"
     gene            complement(1566..2054)
                     /locus_tag="WIX18_000557"
     CDS             complement(1566..2054)
                     /locus_tag="WIX18_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HEZ5237706.1"
                     /translation="MKKYLIPLSIAAVLSGCQSIYVPTLTEIPVNPINTVKTEAPAKG
                     FRLASSHWTDVAKISDEATRLGYQVGIGKMTKVQAAQYLNNFRKRLVGRNAVDDSMYE
                     IYLRSAIDSQRGAINTEQSKLYIQNALRGWQQRWKNMDVKPNNPAFTNFLMEVMKMQP
                     LK"
     gene            2201..3103
                     /locus_tag="WIX18_000558"
     CDS             2201..3103
                     /locus_tag="WIX18_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ5237707.1"
                     /translation="MDTAKKDILGSGWMLVAAVCFTIMNVLIKEASAKFALGSGELVF
                     WRMLFSTVALGAAAVLRRDTFRTPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTL
                     SYTSSIFLAVFSFLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGG
                     AMSGWAYLKVRELSLAGEPGWRVVFYLSVTGVAMSSVWATLTGWHTLSFPSAVYLSCI
                     GVSALIAQLSMTRAYKVGDKFTVASLSYMTVVFSALSAAFFLGEELFWQEILGMCIII
                     LSGILSSIRPTAFKQRLQSLFRQR"
     gene            complement(3144..4274)
                     /locus_tag="WIX18_000559"
     CDS             complement(3144..4274)
                     /locus_tag="WIX18_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ5237708.1"
                     /translation="MTKHLPLAVLTALLLAACGGSDKPPAEKPAPAENQNVLKIYNWS
                     EYVDPETVADFEKKNGIKVTYDVYDSDETLESKVLTGKSGYDIVAPSNAFVGRQIKAG
                     AYQKIDKSLIPNYKHLNPEMMRLMDGVDPGHEYAVPFYWGTNTFAINTERVKKALGTD
                     KLPDNQWDLVFDPEYTSKLKQCGISYLDSAAEIYPMVLNYLGKNPNSSNTEDIREATA
                     LLKKNRPNIKRFTSSGFIDDLARGDTCVTIGFGGDLNIAKRRAEEAGGKEKIRVMMPK
                     EGVGIWVDSFVIPKDAKNVANAHKYINDFLDPEVSAKNGNFVTYAPSSKPARELMEDE
                     FKNDNTIFPTEEDLKNSFIMVPIQPAALKFMVRQWQDVKAGK"
     gene            4479..7448
                     /gene="alaS"
                     /locus_tag="WIX18_000560"
     CDS             4479..7448
                     /gene="alaS"
                     /locus_tag="WIX18_000560"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HEZ5237709.1"
                     /translation="MKTSELRQKFLKFFETKGHTVVRSSSLVPHDDPTLLFTNAGMNQ
                     FKDVFLGFDKRPYSRATTAQKCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFK
                     RDAIHFAWEFLTSPEWLNIPKDKLLATVYAEDDEAYNIWLNEIGMPSERIVRIGDNKG
                     AKYASDNFWQMGDTGPCGPCSEIFYDHGEEIWGGIPGSPEEDGDRWIEIWNCVFMQFN
                     RDEQGNMNPLPKPSVDTGMGLERMAAVMQHVHSNYEIDLFQDLLKAVARETGAAFSME
                     EPSLKVIADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRAVRHGYKLGQKQAFFYKLV
                     PDLVKAMGDAYPELKEKQTQIMEALRAEESRFGETLEKGMGLFNQVYNELKFNQIFDL
                     LAKEFKVTPVEDIDLDMFSTRNFVGRSAEIPYISNQHPNVDYPAPMGNVNEKIYAMPV
                     RLTDGRIGINIFPTDETARLILSNDWNSLRFYSFCNSLITYYQQKGQLETLKLNGEHI
                     FKLYDTYGFPYDLTADICRERNIELDEAGFEREMEAQRTRARAAQSFKANAQLPYDGQ
                     DTEFKGYSERQTESKVLALYKDGEQVNELNEGDEGAIVIDFTPFYAESGGQVGDVGYI
                     FAGENRFEVRDTQKIKAAVFGQFGVQTSGRLKVGDSVTAKVDDEIRNANMRNHSATHL
                     MHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVTAEEIAEVERRVNEAVLANVAVN
                     AAIMSMEDAQKTGAMMLFGEKYGEEVRVLQMGGFSTELCGGTHVSRTGDIGLFKIISE
                     GGIAAGVRRIEAITGLNALKWAQEQERLVKDIIAETKAQTEKDVLAKIQAGAAHAKAL
                     EKELARAKAELAVHAGAKLLDDAKDLGAAKLVAAQIEADAAALREIVTDLTGKSDNAV
                     ILLAAVNDGKVSLCAGVSKPLTGKVKAGDLVKFAAEQVGGKGGGRPDLAQAGGTDAGK
                     LPAVLDSVKDWVGAKLA"
     gene            complement(7536..8558)
                     /locus_tag="WIX18_000561"
     CDS             complement(7536..8558)
                     /locus_tag="WIX18_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HEZ5237710.1"
                     /translation="MLTKKEFEKFLDEVCTVLRQEAKNAPFKSQDIFENRVRALCIAK
                     IPAYADIVINPEPVPQIFPDVPIGEYGVEVKFTLKDTWRSVANSIQEKNKADGVQHIY
                     VIFGKMGGIPDVKWQLYEDSVIHVRTSHVPRFEVEIESDRPSLFEGFGISYAEFADLD
                     MHEKMEYIRKYARNRLKEGERLWWIEDIDAVDSHDLPLEVRLYTSLPQEEKIRLRAEA
                     ALVSPRIVCSGRAKHKYDNAVLYLITYRGVLCHQARDLFSAGSVANSAEDYRGGNYVE
                     KSLKLIEHEIEKAALEMDDALIVEYWGESVPTEKRLEYWIKMLDDLADGWIPSESLFN
                     GRYKAK"
     gene            complement(8612..9763)
                     /locus_tag="WIX18_000562"
     CDS             complement(8612..9763)
                     /locus_tag="WIX18_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HEZ5237711.1"
                     /translation="MTEFARKNWNKLAGDAIKAKMHEHGIGFIQLSELFLEQGESETA
                     NAICNKVNRGTFSHAFYLKCMELMTKQEKQEDREKKYKIISLFSGCGGMDLGFLGGFE
                     FLNRTYDKHDFDIIWANEIDEHAVRTYRHNLGNHIVHGDIWQHLDEIPTSADIIIGGF
                     PCQDISINGKGAGISGSRSGLYKAMLSAVERVRPKIFVAENVKGLLMKHHRKDLETVL
                     SDFRNLGYQVDYYLLNAADYGVPQTRERVIIVGRLPEIPEIQIEKTNTSNSYVTARQA
                     IGDLVDKVEDEIANHIWSRAEKSPDQGSRKLDAERAGYTIRAECHGNIQWHYELPRRI
                     SMREAARIQSFPDNFIFQAKLRATERQIGNAVPPVLGWHIAAAVSKALK"
     gene            10386..10616
                     /locus_tag="WIX18_000563"
     CDS             10386..10616
                     /locus_tag="WIX18_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237712.1"
                     /translation="MFKTLKSIWQGLTQKGKIFPYQLAFTLLIPLRNWALSPQQITQR
                     LHFVPHHRICCGAGYFSCVGCASAHRFLIFAC"
     gene            10857..11801
                     /gene="tehA"
                     /locus_tag="WIX18_000564"
     CDS             10857..11801
                     /gene="tehA"
                     /locus_tag="WIX18_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate transporter/tellurite-resistance
                     protein TehA"
                     /protein_id="HEZ5237713.1"
                     /translation="MSASKKFPIPLSYFSIALGLFALGLSWRYGASVGLLPALAAESL
                     LAVASVVWLLLVAAYLIKMFAYRNDFLSDLRDLVQCCFISAIPITAMLEGLALKPYQA
                     GAAAVLIYVGVAGQLAFSMYRAAGLWRGLHSLEATTPIIYLPTVATNFVSASSLAALG
                     HHDYAALFFGAGMFSWLSLEASILGRLRTAAPVGTAARGVVGIQLAPAFVGCGAYFAV
                     GGKVDGFALALIGYGCLQLLFLLRLTRWFWEGGFTMSFWGFSFGFAAMAGCGLHLAAS
                     GILSGLGLTLATAGSAGVALLLVGTLHRIATGRFLVRG"
     gene            complement(11875..12558)
                     /locus_tag="WIX18_000565"
     CDS             complement(11875..12558)
                     /locus_tag="WIX18_000565"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HEZ5237714.1"
                     /translation="MELVFIRHGQSEWNAKNLFTGWRDVKLSEQGLAEAAAAGKKLKE
                     NGYEFDIAFTSVLTRAIKTCNIVLEESDQLFVPQIKTWRLNERHYGQLQGLDKKQTAE
                     QYGDEQVRIWRRSYDTLPPLLDKDDAFSAHKDRRYAHLPADVIPDGENLKVTLDRVLP
                     FWEDQIAPAILSGKRVLVAAHGNSLRALAKHIEGISDEDIMGLEIPTGQPLVYKLDDN
                     LKVLEKFYL"
     gene            12856..15159
                     /gene="parC"
                     /locus_tag="WIX18_000566"
     CDS             12856..15159
                     /gene="parC"
                     /locus_tag="WIX18_000566"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HEZ5237715.1"
                     /translation="MNMQPHAPHTDSNTLMLGRYAERAYLEYAMSVVKGRALPEVSDG
                     QKPVQRRILFAMRDMGLTAGAKPVKSARVVGEILGKYHPHGDSSAYEAMVRMAQDFTL
                     RYPLIDGIGNFGSRDGDGAAAMRYTEARLTPIAELLLSEINQGTVDFVPNYDGAFDEP
                     LHLPARLPMVLLNGASGIAVGMATEIPSHNLNEVTQAAIALLKKPTLETADLMQYIPA
                     PDFAGGGQIITPADELRRIYETGKGSVRVRARYEIEKLARGQWRVIVTELPPNANSAK
                     ILAEIEEQTNPKPKAGKKQLNQDQLNTKKLMLDLIDRVRDESDGEHPVRLVFEPKSSR
                     IDTDTFINTLMAQTSLEGNVSMNLVMMGLDNRPAQKNLKTILQEWLDFRTVTVTRRLK
                     FRLNQVEKRLHILEGRLKVFLHIDEVIKVIRESDDPKADLMAAFGLTEIQAEDILEIR
                     LRQLARLEGFKLEKELNELREEQGRLNILLGDENEKRKLIIKEMQADMKQYGDARRTL
                     VEEAGRAVLTQTTADEPITLILSEKGWIRSRAGHNLDLSQTAFKEGDRLKQTLEGRTV
                     LPVVILDSLGRTYTLDAAEIPGGRGDGVPVSSLIELQNSAKPVAMLTGLPEQHYLLSS
                     SGGYGFIAKLADMVGRVKAGKVVMTTDSGETVLPPIAVYASSFINPDCKIIAATSQNR
                     ALAFPIGELKIMAKGKGLQIIGLNAGESLTHTAVSSEPEILIESEGRRGAAHKDRIPV
                     SLLEAKRGKKGKLLPISGSLKQLSSPK"
     gene            15180..16712
                     /locus_tag="WIX18_000567"
                     /pseudo
     CDS             15180..16712
                     /locus_tag="WIX18_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230763.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
     gene            16764..17231
                     /locus_tag="WIX18_000568"
     CDS             16764..17231
                     /locus_tag="WIX18_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEZ5237716.1"
                     /translation="MTELQHPVLVVDDETDILDLMEMTLMKMGLRVHTASGVAEAKNK
                     LDSQRYSLVLTDMRMPDGSGLEVVQHINSRLLDTPVAVITAFGNADQAQEALRCGAFD
                     PDTMQIQDYLDQIERDIIEQTLKQTEGNRTQADKRLGISFRSMRYRMERLNIG"
     gene            17335..18087
                     /locus_tag="WIX18_000569"
     CDS             17335..18087
                     /locus_tag="WIX18_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ5237717.1"
                     /translation="MTDILIDNTATETVRTLIRAFPLVPVSQPPEQGSYLLTEHDTVS
                     LRLVGEKSSVIVDFASGAAQYRRTKGGGELIAKAVNHTAKPTVWDATAGLGRDSFVLA
                     SLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVQTQG
                     KPDIVYLDPMYPERRKSAAVKKEMAYFHRLVGEAQDEAVLLHTARQTAKKRVVVKRPR
                     LGEHLAGQAPAYQYTGKSTRFDVYLPYEADKG"
     gene            complement(18472..18678)
                     /locus_tag="WIX18_000570"
     CDS             complement(18472..18678)
                     /locus_tag="WIX18_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2788 domain-containing protein"
                     /protein_id="HEZ5237718.1"
                     /translation="MDEAVFADWALKICLTGLIIFLGFIVWNLGKESKAGKFGIAILF
                     LVLGLGVFGFVFKELLIKFLVLPK"
     gene            complement(18765..19934)
                     /gene="metZ"
                     /locus_tag="WIX18_000571"
     CDS             complement(18765..19934)
                     /gene="metZ"
                     /locus_tag="WIX18_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-succinylhomoserine sulfhydrylase"
                     /protein_id="HEZ5237719.1"
                     /translation="MSKKLHPQTLAIRGGKEQTEYREHNQALFLTSSFMWDNAQHAAD
                     LFSKKIKGFTYTRTANPTTAAFEKRIAALEGAERAVATSTGMSAIQAAFFTFLQAGDH
                     VVSSRSLFGTTVGFINNIVTKFGIEVSHVSPTDINEWKAAVKANTKLLFLETPSNPLG
                     EVADLEALAELAHGIGAILVVDNSLLSPVGSQPLKHGADISVSSATKAIDGHGRVMGG
                     VLAGSEELMAQAAVYCNSCGLAMSPFNAWQLLSGVETLSLRMEKQFDNALKIAQWLQA
                     QPQVQAVYYTGLPDHPQAALIRKQQNGGGIVIGFEVADQAAAWKVVDGVELFSRTANL
                     GDVRSTITHPWTTTHGRMQPEEKLAANIRPGLVRLSVGLEYVGDLIDDLKQALAR"
     gene            complement(20079..20840)
                     /locus_tag="WIX18_000572"
     CDS             complement(20079..20840)
                     /locus_tag="WIX18_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237720.1"
                     /translation="MDANKEPNWEKRLENLRQTRRMKAVPTYAPLSRPSETGTDAPVP
                     KLDDESRARVLKAYLKKWQEEHNAAVADCGEEVETDPMIVLQENWLNAQASLQMSVSE
                     KHIESRRRIRFDAQKDSAEFETGQIEGRENADAAESGTAADGVAENGEGGAEEALMPV
                     QINILNPKAVNRREVFCLSEQELTERLIKRLRPHLTDTVNGIIRTAVQKQMAVFTYQL
                     QQMLHEQAGAVVEDVLEHDVRKILNDIKYELKYKR"
     gene            20940..21191
                     /locus_tag="WIX18_000573"
     CDS             20940..21191
                     /locus_tag="WIX18_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237721.1"
                     /translation="MGSIEQRLEYLEEANDVLRMQNHVLSTAFKALIRALPAETAEIA
                     VESIQLAFEDALAELSYEDSPHTDLFHDVTYAFFREKER"
BASE COUNT         5066 a         5853 c         5257 g         5115 t
ORIGIN      
        1 tcacgcttac cccttgtttc tcaaatgccg tctgaaaaaa acggctgtat atgttgtctg
       61 caaaatatcg ggaagcataa cagacaaaat gccgtctgaa atattttcag acggcatttc
      121 aatccgattc ggattatttt tgcgtttcaa ccgcttccaa tgcacgcagg gcgtaagtgt
      181 aagcggcacc ggcattcagg gcgatggcgg ttgccaatgc gccggcgatt tcgctgtcgg
      241 tcgcaccggc tttggcggcg gcggcggcgt gaacactgat gcagctctca caacgtgtgg
      301 taatggcaac ggcgatggca atcagttcgc gcgttttggc atcaagtgct tcggcggcgg
      361 cggcctgttc caatgcgccg taggcctgca gcattttagg atgcgcctta cccagctcgc
      421 cgaacgattt tttaaccaat gcggtatgtt ctttccaatc tttaaacatt ttcttttcct
      481 ttctcttgcg tttaaccctg atacgcgctt gcgtatctgt tttcgatgtg cgtattattg
      541 caattattca gttgtgtttc tcgtttaatc atctcatttt atggttcaaa aagatttatg
      601 gacattctgg acaaatctgg tcgatttcgc ccaattgacg ggcagtgtgg atgtgcagtg
      661 ccttttgggc ggacaatggt cggtacggca tgaaaccttg caacgcgaag gattggtaca
      721 cattgttaca tcgggcagcg gctatctctg catcgacggc gaaacttccc cgcgtccggt
      781 cagtacaggg gatattgtat ttttcccgcg cggcttgggt catgtgttga gccacgacgg
      841 aaaatgcgga gaaagtttac aaccggatat gcggcagcac ggtgcgttta cggtcaaaca
      901 gtgcggcaac ggacaggata tgagcctgtt ttgcgcccgt ttccgctacg acacccacgc
      961 cgatttgatg aacgggctgc ctgaaaccgt ttttctgaac attgcccatc cgagtttaca
     1021 gtatgtggtt tcaatgctgc aactggaaag caaaaaacct ttgacgggga cggtttccgt
     1081 ggtcaacgca ttgtcgtccg tcctgctggt gcttatcctg cgcgcctatc tcgaacagga
     1141 taaggatgtc gaactctcgg gcgtattgaa aggttggcag gacaaacgtt tgggacattt
     1201 aatccaaaag gtgatagaca aaccggaaga cgaatggaat gtcgacaaaa tggtggcggc
     1261 tgccaatatg tcgcgcgcgc aactgatgcg ccgtttcaaa agccgggtcg gactcagccc
     1321 gcacgccttt gtgaaccata tccgcctgca aaaaggcgcg ttgctgctga aaaaaaaccc
     1381 ggattcggtt ttgtcggtcg cactgtcggt aggctttcag tcggaaacgc acttcggcaa
     1441 ggcgttcaaa cggcaatatc acgtttcgcc gggtcaatac cggaaagaag gcgggcaaaa
     1501 ataaatcggg gcttcaaacg caaatgccgt ctgaaaaggc tttcatacag catttgcgta
     1561 ccgcgtcatt tcaagggctg catcttcatc acttccatca aaaagttggt aaatgcgggg
     1621 ttgttgggtt tgacatccat atttttccaa cgctgctgcc agccgcgcaa ggcattctgg
     1681 atatacagct tggactgttc cgtattgatt gcgccccgct ggctgtctat cgccgaacgc
     1741 aggtagattt catacatact gtcatcgacg gcattgcgtc cgaccaggcg ttttctgaag
     1801 ttgttcagat attgcgccgc ctgaaccttg gtcattttac cgatacccac ctgatagccc
     1861 aagcgcgtcg cttcatcgct gattttggca acatccgtcc aatgcgaaga ggcaaggcgg
     1921 aaaccttttg caggtgcttc cgttttgacg gtattgatag gattcacggg gatttccgtc
     1981 aatgtgggca cataaataga ctggcagccg gaaagaactg ccgcaatgga aagagggata
     2041 aggtattttt tcatgccccc attataatca agtttgcctt gagaaaacaa attgttcggc
     2101 aagaaaaata aaatttcggc atcagaagca ggcaaaaaca cattccacaa gccttgccgc
     2161 aaggtttaca atccgaccgt ccttatcgca acgaccgttt atggataccg caaaaaaaga
     2221 cattttagga tcgggctgga tgctggtggc ggcggtctgc ttcaccatta tgaacgtatt
     2281 gattaaagag gcatcggcaa aatttgccct cggcagcggc gaattggtct tttggcgcat
     2341 gctgttttca accgttgcgc tcggggctgc cgccgtattg cgtcgggaca ccttccgcac
     2401 gccccattgg aaaaaccact taaaccgcag tatggtcggg acgggggcga tgctgctgct
     2461 gttttacgcg gtaacgcatc tgcctttggc caccggcgtt accctgagtt acacctcgtc
     2521 gatttttttg gcggtatttt ccttcctgat tttgaaagaa cggatttccg tttacacgca
     2581 ggcggtgctg ctccttggtt ttgccggcgt ggtattgctg cttaatccct cgttccgcag
     2641 cggtcaggaa acggcggcac tcgccgggct ggcgggcggc gcgatgtccg gctgggcgta
     2701 tttgaaagtg cgcgaactgt ctttggcggg cgaacccggc tggcgcgtcg tgttttacct
     2761 ttccgtgaca ggtgtggcga tgtcgtcggt ttgggcgacg ctgaccggct ggcacaccct
     2821 gtcctttcca tcggcagttt atctgtcgtg catcggcgtg tccgcgctga ttgcccaact
     2881 gtcgatgacg cgcgcctaca aagtcggcga caaattcacg gttgcctcgc tttcctatat
     2941 gaccgtcgtt ttttccgccc tgtctgccgc attttttctg ggcgaagagc ttttctggca
     3001 ggaaatactc ggtatgtgca tcatcatcct cagcggtatt ttgagcagca tccgccccac
     3061 tgccttcaaa cagcggctgc aatccctgtt ccgccaaaga taaaaaatgc cgtccgaaca
     3121 tccttcagac ggcatatcgg gctttatttc cccgccttca catcctgcca ctggcgcacc
     3181 ataaacttca atgccgccgg ctggataggc accatgataa agctgttttt caaatcctcc
     3241 tcggttggga aaatcgtatt gtcgttttta aattcgtctt ccatcagctc acgcgccggc
     3301 ttgctcgaag gcgcataagt aacgaaattg ccgtttttcg ccgacacttc cggatcgagg
     3361 aagtcgttga tgtatttgtg cgcgttggcg acgtttttcg catctttcgg aatcacgaaa
     3421 gaatccaccc aaatccccac gccctctttg ggcatcatca cgcggatttt ttccttgccg
     3481 cccgcttctt cggcacggcg tttggcgatg ttcaaatcgc cgccgaaacc gattgttacg
     3541 caggtatcgc cgcgcgccaa atcatcgata aagccggacg aagtaaagcg tttgatattg
     3601 gggcggtttt tcttgagtag ggcggttgcc tccctgatgt cttccgtatt gctgctgttc
     3661 gggtttttac ccaaatagtt caacaccata ggatagattt ccgccgcgct gtccaaatag
     3721 ctgatgccgc attgcttgag tttggacgtg tattcggggt cgaacaccaa atcccactgg
     3781 ttgtccggca gcttgtccgt acccaaagcc tttttcacgc gttcggtatt gatggcgaag
     3841 gtatttgtcc cccaataaaa cggcacggcg tattcgtggc cgggatcgac cccgtccatc
     3901 agcctcatca tttcagggtt gaggtgttta taattgggaa tcagcgactt atcgattttc
     3961 tgatacgcac ctgccttaat ctgcctgccc acaaacgcat tggacggcgc gacaatgtcg
     4021 taaccggact tgcctgtcag caccttgctt tccagcgttt catcgctgtc gtacacatca
     4081 taagtaacct tgatgccgtt tttcttttca aaatcggcaa cggtttccgg atcgacatat
     4141 tccgaccagt tgtaaatttt caatacgttt tggttttccg ccggtgccgg tttttcggca
     4201 ggcggtttgt ccgaaccgcc gcacgctgca agcagcaaag cagtcaggac ggccaggggc
     4261 agatgtttgg tcattatcat tccttgcata tcgggttgga gaaagcggcc attatagccg
     4321 atattggcaa cagggcttca gacggcattc aaaatcccgc cacactcttc cgaaaaccgc
     4381 cgcttccata gctagaaaca gggatttgcg gtaagatacc gccgttcgtt ttccctgctt
     4441 ttaccatgac aagacatttg agagacattg aaaaaattat gaaaacctcc gaactgcgcc
     4501 aaaaattcct aaaatttttt gaaaccaaag gccacaccgt cgtccgctct tccagcctcg
     4561 tgccgcacga cgacccgacc ctgctgttta ccaacgcggg catgaaccag tttaaagacg
     4621 tattcttagg tttcgacaaa cgcccgtaca gccgcgccac caccgcgcaa aaatgcgtac
     4681 gcgcaggcgg caagcacaac gacttggaaa acgtcggcta caccgcccgc caccacacct
     4741 tctttgaaat gatgggcaac ttctccttcg gcgactactt caaacgcgac gccatccatt
     4801 tcgcttggga gtttctgact tcccccgaat ggctcaacat ccctaaagac aaactgttgg
     4861 cgaccgttta cgcagaagac gacgaagcct acaacatctg gttgaacgaa atcggtatgc
     4921 cgtctgaacg catcgtccgc atcggcgaca acaaaggcgc gaaatacgcg tctgataatt
     4981 tttggcaaat gggcgacacc ggcccttgcg gcccctgctc cgaaattttc tacgaccacg
     5041 gcgaagaaat ttggggcggc attcccggca gccccgaaga agacggcgac cgctggatcg
     5101 aaatttggaa ctgcgtattt atgcagttca accgcgacga acaaggcaat atgaatccgc
     5161 tgcccaagcc gtccgtcgat accggcatgg gtttggagcg catggcggca gtaatgcaac
     5221 acgtccacag caactacgaa atcgacttgt tccaagacct gctcaaagcc gttgcccgcg
     5281 aaaccggcgc agctttcagc atggaagaac caagcctaaa agtcatcgcc gaccacatcc
     5341 gctcctgctc attcctgatt gcagacggcg tattgccttc caacgaaggc cgcggctacg
     5401 tattgcgccg cattatccgc cgcgccgtgc gccacggtta caaactgggt cagaaacaag
     5461 catttttcta caagctcgtg cctgatttgg tgaaagcgat gggcgacgcg tatcccgagt
     5521 tgaaagagaa gcagacgcaa attatggaag ccctgcgcgc ggaagaaagc cgcttcggcg
     5581 aaacgctgga aaaaggcatg ggcttgttca accaagtcta taatgaattg aaattcaatc
     5641 aaatttttga tcttctggcg aaagaattta aggttacacc tgttgaagat attgatcttg
     5701 atatgtttag tacaagaaat tttgtaggaa gaagtgctga aattccttat atatcaaatc
     5761 aacaccctaa cgtggattat cccgctccta tggggaacgt aaatgaaaaa atttatgcta
     5821 tgccagtgag attaacagat ggaagaattg gtattaatat ttttcctact gatgaaactg
     5881 cacgcctaat ccttagcaat gattggaata gtttgcgctt ctattctttt tgtaattcgt
     5941 tgattactta ttatcaacag aaaggtcaat tagaaacatt aaaattgaac ggcgaacaca
     6001 tcttcaaact ctacgacacc tacggtttcc cctacgacct gactgccgac atctgccgcg
     6061 aacgcaatat cgaactggac gaagcaggct tcgagcgcga aatggaagcc caacgcacac
     6121 gcgcacgcgc cgcacaaagc ttcaaagcca acgcccaact gccttacgac ggtcaagaca
     6181 ccgagtttaa aggttatagc gaacgccaaa ccgaatccaa agtcctcgcc ctctacaaag
     6241 acggcgagca agtcaacgaa ttgaacgaag gcgacgaagg tgccatcgtt atcgacttta
     6301 ccccgttcta tgcagaatcc ggcggccaag tcggcgacgt cggctatatc tttgcaggcg
     6361 aaaaccgctt tgaagtacgc gatacccaaa aaatcaaagc agccgtattc ggccaattcg
     6421 gcgtacaaac ttcaggccgt ctgaaagtcg gcgacagcgt taccgccaaa gtggacgacg
     6481 aaatccgcaa tgccaatatg cgcaaccaca gcgcgaccca cctgatgcac aaagccctgc
     6541 gcgacgtatt gggcggacac gtcgaacaaa aaggctcttt agttaccgcc gaatccaccc
     6601 gtttcgacat ttcccatccc caagcggtca ctgccgaaga aatcgccgaa gtcgaacgcc
     6661 gcgtcaacga agccgttttg gcgaacgttg ccgtcaatgc agccattatg agcatggaag
     6721 acgcgcaaaa aaccggcgcg atgatgctct tcggcgaaaa atacggcgaa gaagtgcgcg
     6781 tactgcaaat gggcggtttc tctaccgaat tgtgcggcgg cacacacgtt tcacgcaccg
     6841 gcgacatcgg cctcttcaaa atcatcagcg aaggcggtat tgccgcaggc gtgcgccgta
     6901 tcgaagccat caccggcctg aacgcactca aatgggcgca agagcaagag cgtttggtga
     6961 aagacattat tgccgaaacc aaagcccaaa ccgaaaaaga cgtactggca aaaatccaag
     7021 caggcgcggc acacgccaaa gcattggaaa aagaattggc acgcgccaaa gccgaactcg
     7081 ccgtccacgc aggcgccaaa ctcttggacg atgcaaaaga cttgggcgca gccaaactcg
     7141 ttgccgccca aatcgaagcc gacgcagccg ccctgcgcga aatcgttacc gatttaaccg
     7201 gtaaatccga caacgccgtg attcttttag cggcagtaaa cgacggcaaa gtctccctgt
     7261 gcgccggcgt atccaaaccg ttgaccggca aagtgaaagc aggcgatctg gttaaatttg
     7321 cagccgaaca agtcggcggc aaaggaggcg gcagaccaga tttggcacag gcagggggca
     7381 cggatgcagg caaattgccc gccgtgttgg atagcgtgaa agactgggtc ggcgcgaagc
     7441 tggcttgatg gagaaaggca gcctgaaagg gattcaggct gccttttgtg ttaaagatgc
     7501 cgtctgaaag atattttcag acggcctctg tcagtttatt tggctttata cctaccattg
     7561 aatagcgatt cagaaggtat ccagccatct gccaaatcat ccaacatctt aatccaatac
     7621 tctaggcgtt tttctgtcgg gacgctttct ccccaatatt cgacaattag agcatcatcc
     7681 atttccaaag cagctttttc aatttcatgc tcaatcaatt ttaaagattt ttctacatag
     7741 tttccgccac ggtagtcttc cgccgagttg gcaacgctgc ccgcactgaa taagtcccgc
     7801 gcctgatgac aaagcacacc gcgataggta atcagataca ggacggcatt atcgtatttg
     7861 tgcttcgccc tgcctgagca gacaatacgg ggggagacta atgctgcttc agctcggagg
     7921 cggatttttt cttcctgcgg cagggaagtg taaaggcgca cttccaaagg cagatcatgg
     7981 ctgtctactg cgtcaatgtc ttctatccac cataaccgct cgccttcttt cagcctgtta
     8041 cgggcatatt ttcggatata ttccattttt tcatgcatat ccaaatcggc aaattcagca
     8101 taggaaatac cgaaaccctc aaacagagac ggtcgatcag attctatttc tacctcaaag
     8161 cgcggaacat gcgatgtgcg gacatgaatt acgctatctt cgtaaagttg ccatttcaca
     8221 tcgggaatgc cccccatttt tccgaatatc acatagatat gctgtacacc gtcagctttg
     8281 tttttctctt ggatactgtt tgctacgctt cgccaagtat cttttagcgt gaatttgact
     8341 tctacgccat attcccctat tggaacatcg gggaaaattt gcggcacagg ttcaggattg
     8401 ataactatgt cagcataagc gggaattttt gcaatgcaca gcgcacgaac tctgttttca
     8461 aaaatatctt gggatttgaa aggtgcgttt tttgcctctt gcctcaatac ggtgcaaacc
     8521 tcgtctaaaa acttctcaaa ctcctttttt gtcagcataa tgcattacca cttaaaaata
     8581 taaagtagta attttatctt atttaacagg gttatttaag tgccttactg acagcggcgg
     8641 cgatgtgcca ccctaaaaca ggagggacgg cgttgccaat ttgccgttct gtggcacgca
     8701 attttgcctg gaaaataaaa ttgtcgggaa acgattggat gcgcgccgcc tcacgcatgg
     8761 agatgcggcg gggtaattcg taatgccact gtatgtttcc atggcattct gccctaatag
     8821 tgtagcccgc cctttcggca tccaattttc gactaccttg atcggggctt ttttctgctc
     8881 tactccaaat atggttggca atttcgtctt ctactttgtc gaccaaatcg cctatagcct
     8941 gtctggctgt tacatagctg ttgctggtat ttgttttttc aatctgtatt tcgggaattt
     9001 caggtagcct tccaacgata ataactcgct cccgagtctg tggaacaccg taatcggctg
     9061 cattcagcaa gtagtaatct acctgataac ccaaattgcg aaaatctgaa agcactgttt
     9121 ccaaatcttt ccgatgatgc ttcatcagta gccctttgac attttcagca acaaatattt
     9181 tggggcgaac gcgttcaaca gcagacaaca tggctttata cagcccgctg cggctgcctg
     9241 aaatacctgc acctttacca ttaatagaaa tatcctgaca aggaaagcca ccgataatga
     9301 tgtctgcgct agtgggtatt tcatccaaat gctgccaaat atcaccatgt acaatgtgat
     9361 ttcctaagtt gtggcggtag gttctaacag cgtgttcgtc gatttcgttc gcccaaataa
     9421 tatcaaaatc atgtttgtca taagtacggt ttaaaaactc aaagcccccc agaaaaccca
     9481 aatccattcc gccacaaccg ctaaataaag aaataatttt atattttttt tcgcggtctt
     9541 cttgcttttc ctgtttggtc attaactcca tacatttaag ataaaaagca tgggaaaaag
     9601 tacctctatt tactttgtta caaattgcat ttgccgtttc actttcccct tgctccaaga
     9661 ataattctga taattgtata aagccaattc catgctcatg cattttggct tttatggcat
     9721 ctccagctaa cttgttccaa ttttttcgtg caaattcggt catggttaat ctttcagtca
     9781 ttcataaatg acattatttt agcgtttttt ataatttaag ccaagattta aaatctacct
     9841 ttaggtttac aggccgtctg aaaacaaaaa tctcgttttc agacggcctt tttccgctaa
     9901 aatcccccta ccgtccaacc cgaaacaagg agaaccatca tgcaagttcc tacttccgcc
     9961 atcatcaacg gcgaatttgc cgacaaatac ggcaaacgcg gcagcaagcc gtagccagca
    10021 cccctgtcaa ccgcgtgcgt ggctagacca cacaccctac cactgcgggc gacgcaaacc
    10081 ttaagattga ggtgtagggt gtgtgcggta cgcacgcacg cggtttttgt tactaccgaa
    10141 tgattccaaa ccatgccgta atccagtcag cagcaaactc agcttgggtc atgtaccaac
    10201 aaaactcaat atcaaaggcc gtctgaagaa taattttcag acggcttctc tctatcaaaa
    10261 gcagcctgca cattcaaaaa tcgaagtgca ggctgctttt tgtgatgatt ggaaaaaaca
    10321 cacactattt ttatactgta tattgtgcag gtacaaagta aaacgaatta cccaaagaaa
    10381 ttcccatgtt taagacgctc aaaagcattt ggcagggact tacgcaaaaa ggcaaaatct
    10441 tcccgtacca actggcattc acgctgctga ttcctttgcg taactgggcg ctttcaccgc
    10501 aacaaatcac gcaacggctg cactttgttc cgcaccaccg aatttgctgc ggggcgggtt
    10561 atttcagttg cgtaggatgt gcttcagccc accgtttcct catttttgct tgttaattgg
    10621 tgggctgaag cccacactac ggttaatacg gttactgatt cgtttccccc tgcatccgaa
    10681 tcacgccgca caccgcaaaa aacgcgcgcc cgatgcgcaa ccgcttccga catttggcgc
    10741 aatgagacaa aacggcaata tgccgatacg gatacgtcat cctccgcctg cctgtttttt
    10801 atatcatact caattttatc tgtgcgttac gacggcatgc cgtctgaagg gtgtttatgt
    10861 ctgcatctaa gaaatttccg attcctttga gctatttcag catcgcgctg ggcttgtttg
    10921 ccttggggct gtcgtggcgt tacggcgcgt ctgtcgggct gctccccgcc ttggccgccg
    10981 aatcgctgct tgcggtggct tcggttgtct ggctcttgct ggtggcggca tacctgatca
    11041 aaatgtttgc gtaccgaaac gattttttgt ctgatttgcg cgacttggtg caatgctgct
    11101 tcatcagcgc gattccgatt accgctatgc tggagggact cgcgctgaag ccctatcagg
    11161 caggcgcggc ggcagtcctg atttatgtcg gcgttgccgg acagttggcg ttttcgatgt
    11221 atcgggcggc cggtctgtgg cgcggcctgc attccttgga ggcgacgacg ccgattattt
    11281 atctgcctac ggttgcgaca aactttgtca gcgcgtcatc tctggccgcg ttggggcatc
    11341 atgattatgc agctttgttt ttcggcgcgg gtatgttttc ctggctgagc ttggaagcct
    11401 ccatcttggg caggctgcgc acggcggcac cggtcggcac ggcggcgcgc ggcgtggtcg
    11461 gcatccagct tgcgcccgcc tttgtcggct gcggcgcgta ttttgccgtc ggcggtaaag
    11521 tcgacggttt tgcgttggca ttaatcggct acggctgcct gcagcttttg ttcttgctgc
    11581 gcctgacccg ctggttttgg gaaggcggtt ttacgatgag cttttgggga ttttcattcg
    11641 gtttcgcggc aatggcagga tgcggtctgc atctggcggc ttctggcata ttgtcgggct
    11701 tggggctgac gcttgccacc gccggatcgg caggcgtggc gctgctgctt gtcggtacgc
    11761 tgcaccggat agcgacgggg cgtttcttgg tacgcggctg atgcgttttg ccgccttgtc
    11821 aaaaatgccg tctgaacgcc caagccttca gacggcattt tttatttcaa acccttacag
    11881 gtagaatttt tcgaggactt tcaggttgtc atccaatttg tacaccagcg gctgaccggt
    11941 cgggatttcc aagcccatga tgtcttcgtc ggaaataccc tcgatgtgtt ttgccagcgc
    12001 gcgcagggag ttgccgtgcg ccgctaccaa gacgcgtttg ccgctcaaaa tcgcgggggc
    12061 gatttggtct tcccaaaacg gcaatacgcg atccagcgtt actttcaggt tttcgccgtc
    12121 ggggataaca tcggcaggca gatgggcata gcggcggtct ttgtgtgcgg aaaacgcgtc
    12181 gtctttgtcc aaaagcggcg gcagagtgtc gtagctgcgc cgccagatgc ggacttgctc
    12241 gtcgccgtat tgttcggcgg tttgtttttt gtccaaacct tgcagttggc cgtagtggcg
    12301 ttcgttcagc cgccacgttt tgatttgcgg tacgaacagt tggtcggatt cttccaaaac
    12361 gatgttgcag gtcttaatcg cgcgggtcag gacggatgtg aaggcgatgt cgaactcata
    12421 gccgttttct ttcagttttt taccggcggc ggcagcctcg gcaagcccct gctcgctcag
    12481 cttcacgtcg cgccagcctg taaacaggtt tttcgcgttc cattcgcttt gtccgtggcg
    12541 gataaatacc agttccatat cgtctccaat gtgtgaaagt aggaaagcct tatttataac
    12601 atattttcac atttcccgta tttgattcag atttagacac ggtgcccact atggtttgcc
    12661 gttttgattt acaataatgt cctttgcttt acattccgca tacacaatgt ttcaacacac
    12721 aggacgacac ataaagcacc gccctatgtg ttgccctgat ttggaagggg ttgccccctc
    12781 ccaaataaag tctgattcta ccgccccgaa ggacagatgt ccaagtggcg ggggttcaac
    12841 cgaaaaggaa atacgataaa tatgcaaccg cacgctccac ataccgattc caatacgctg
    12901 atgctcggcc gatacgccga acgcgcctat ctcgaatacg ccatgagcgt ggtcaaaggc
    12961 cgcgcgctgc ctgaagtttc agacggccaa aagcccgttc agcggcgcat tttgtttgcg
    13021 atgcgcgata tgggtttgac ggcgggagcg aagccggtga aatcggcgcg cgtggtcggc
    13081 gagattttgg gtaaatacca cccgcacggc gacagttccg cctatgaggc gatggtgcgg
    13141 atggcgcagg attttacctt gcgctatccc ttaatcgacg gcatcggcaa cttcggttcg
    13201 cgtgacggcg acggggcggc ggcgatgcgt tacaccgaag cgcggctgac accgattgcg
    13261 gaattgctgt tgtccgaaat caatcagggg acggtggatt tcgtgccgaa ctacgacggc
    13321 gcgtttgacg aaccgctgca cctgcccgcc cgcctgccta tggtcttgct caacggtgcg
    13381 tcaggcattg cggtgggtat ggcgaccgaa atcccatcac acaatttgaa tgaagtcaca
    13441 caggcggcga ttgcactgtt gaagaagccg acgctggaaa ccgccgacct gatgcaatac
    13501 atccctgctc ccgattttgc cggaggcggt caaatcatca cgccggcgga cgaattgcgc
    13561 cgtatttacg aaaccggcaa gggcagcgtg cgcgtgcgtg cgcgttacga aatcgagaag
    13621 ctggcgcgcg gacaatggcg cgtcatcgta accgagctgc cgccgaacgc caattccgcc
    13681 aaaatccttg ctgaaatcga agaacagacc aacccgaaac cgaaagcagg caaaaagcag
    13741 ctcaaccaag accagctcaa tactaaaaag ctgatgctgg atttaatcga ccgcgtgcgc
    13801 gacgagtcgg acggcgaaca tcccgtgcgc cttgtatttg aaccaaaatc cagccgcatc
    13861 gataccgata ccttcatcaa cacgctgatg gcgcaaactt cgctggaagg caatgtgtcc
    13921 atgaacttgg tgatgatggg gctggacaac cgccccgcgc agaaaaacct gaaaacgatt
    13981 ttgcaggaat ggttggattt ccgcaccgtt accgtaacac gccgtctgaa attccgtttg
    14041 aaccaagtgg aaaaacggct gcacatcctc gaaggccgtc tgaaagtctt tctgcacatc
    14101 gacgaagtga ttaaagtcat ccgcgaatca gatgacccga aagccgattt gatggcggcg
    14161 ttcgggctga ccgaaatcca agccgaagac attttggaaa tccgcctgcg ccagttggca
    14221 cgtttggaag gtttcaaact cgaaaaagaa ttgaacgaat tgcgcgaaga acaaggccgt
    14281 ctgaacatcc ttttgggcga tgaaaacgaa aagcgcaagc tgattatcaa agagatgcag
    14341 gcggatatga aacaatacgg cgatgcacgc cgcacgctgg tggaagaggc cggacgcgcc
    14401 gtgctgacac aaaccaccgc cgacgaaccc atcacactga ttctgtcgga aaaaggctgg
    14461 atacgcagcc gtgccggaca caatctcgat ttgagccaaa ccgcgttcaa agaaggcgac
    14521 cgcctcaaac aaacccttga aggcagaacg gttttacccg tcgtcatcct cgattcattg
    14581 ggcagaacct atacactcga tgccgccgaa attcccggcg gacgcggcga cggcgtgccg
    14641 gtttcatcct tgatcgagtt gcaaaacagc gcgaaacccg ttgcgatgtt gacaggattg
    14701 ccggaacaac attatttatt atcaagcagc ggcggctacg gcttcatcgc caagttggct
    14761 gatatggtcg gacgcgtaaa agcgggcaaa gtggtgatga ccacagacag tggcgaaacc
    14821 gtcctgccgc cgattgccgt ctatgcctcc tcgttcatca accccgactg caaaatcatt
    14881 gccgccacca gtcaaaaccg cgccctcgcc ttccccatcg gcgaattgaa aattatggcg
    14941 aaaggcaaag ggctgcaaat catcggatta aacgccggcg aatcgctgac gcataccgcc
    15001 gtttcttccg agccggaaat cctgattgaa agcgaaggca ggcgcggcgc ggcgcacaaa
    15061 gaccgcatcc ccgtctccct gcttgaggca aaacgcggca aaaaaggcaa actattaccc
    15121 atatcgggca gcctgaaaca gctttcttcc cccaaataaa cccgattcca cacataatta
    15181 tggtgatttc caacccccgc gaacttgaaa aactcaaaga ccggattccc aatctgatca
    15241 acatcatccg cgtcgccatc gtttttccgc tgatgattat gcacatcctc gggctggaaa
    15301 ccggcagccg tgcgaacctg cacgcttcgt ggacggcgtg ggcgttttat gtttggctcg
    15361 ccattgcctg ctggctgatt ttcttttcca tcatccatcc gcattggcaa tggcagtcgc
    15421 tgaaaatgcc gcgtttcagc gcggtggcgg acatcacgat gatcggcgtg ctgacctacc
    15481 tgtttggcgg catcgattcc ggcttcggca tcctgatcct gcccttcgtc gtctgctcct
    15541 gcctgctcag ctacgggcgt taccccctgc tctattccag ctacgccgcc atcctgctga
    15601 tattcaacgc cattgccgac ggcgatatcg gcaaataccc gctcatatcg gatgcccgaa
    15661 ccgcctcggt aaccttcatc cttgtcgccg cctcctatct ttccgccatc ttcacctcac
    15721 tgtcggtcag atacatcgac agcgccggcc ggctggcacg cgacaaccac ctcgcctacc
    15781 ggcgcatcaa aggcttgagc caaaccgtac tcaaccgcgt tcaggaagcg gtcgtcgtca
    15841 tcaacgtcga gcatcagacc atactgttca ataaaaaggc aaaagacctg ctacccatgc
    15901 ttgaaatcgg acagcatact gccctgttcg accctattac cgttttatgg gacaaggcct
    15961 cttcgcgtac tttcgaacgc aatatcgaca cgcccggcct gaacgccggc atccgcgccg
    16021 ttccggtcaa caaagggccg gacaagctgc tcatcctcta catccgcccg caaagcgaaa
    16081 ttcaggcaga agccctgtcc gtcaaacttg ccgcgctcgg acaactgacc gccaacctcg
    16141 cccacgaaat ccgcaacccg atgtccgcca tccgccacgc caacgacctg ctgcgcgaaa
    16201 atatggaagc gggggcggca gatccgttca acgccaaatt gtgcaaaatc atcgacggca
    16261 acgtctgccg tatcgacaaa atgctcgaag atatttcctc gccaacaagc gcaacaaaac
    16321 cgaacgcgaa accatcggcc tgataccgtt ttgggaagaa ttcaaacaag agttcctgct
    16381 cggccatccc gatgccgccg gctgcatccg cctagatatg cagggcaatc acctgactgc
    16441 ctatttcgat cctgcccacc tgcggcaaat tatgtggaac ctcgccaaca acgcgtggcg
    16501 gcacagcagc aaacgtaacg gctcgattgc cgtcgtcgcc cgtcctgcac aaaaaaacac
    16561 catcagcatc ctgtttgccg acgacggcgg cggcgttccg cccgaagtgc aggaacactt
    16621 gttcgaaccc ttttacacca cagcaaaaaa cggaaccggc ttgggactgt atgtcgcccg
    16681 cgaactggca cacgccaatt tcggcgattt gacctacctg ccggaagcca aatgtttcga
    16741 actcacatta ccggaaaaaa ccaatgactg aactgcaaca tcccgtcctc gtcgtcgatg
    16801 acgaaaccga cattctcgac ctgatggaaa tgaccctgat gaaaatgggc ttgcgcgtcc
    16861 ataccgcgtc aggcgttgcc gaagccaaaa acaagctcga cagccaacgc tattcgctcg
    16921 tcctgaccga tatgcgtatg ccggacggct cggggctaga agtcgtccaa cacatcaaca
    16981 gccgcctgct cgatacgccg gttgccgtca tcaccgcctt cggcaatgcc gatcaggcac
    17041 aggaagccct gcgttgcggc gcgttcgacc ccgataccat gcagatacag gactatctcg
    17101 accaaatcga acgcgacatc atcgaacaaa ccctcaaaca aaccgaaggc aaccgcacgc
    17161 aggccgacaa acgcttgggc atcagcttcc gttccatgcg ctaccgtatg gaacgcctca
    17221 acatcggctg acgacaaaac ggcatccgca ccatctccgc ccacccgaaa aaatgccgtc
    17281 tgaaacggca cgggaaagcg ggttcgcccc acgcccgaac ggacacaaaa caccatgacc
    17341 gacatcctta ttgacaacac cgccaccgaa accgtccgca ccctgatacg ggcattcccc
    17401 cttgtgcccg tttcccaacc gcccgaacaa ggcagctacc tccttaccga acacgatacc
    17461 gtcagcctca ggcttgtcgg ggaaaaaagc agcgtcatcg tcgactttgc ctcgggagcc
    17521 gcacaatacc ggcgcacaaa aggcggagga gaactcatcg ccaaagccgt caaccatacc
    17581 gccaaaccca ccgtatggga tgcaaccgca ggattggggc gcgacagctt cgtcctcgcc
    17641 tcgctcggac tgaccgttac cgccttcgag cagcatcccg ccgtcgcctg cctgctttca
    17701 gacggcatcc gccgcgccct cctcaatccc gaaacgcaag acaccgccgc gcgcatcaac
    17761 ctccatttcg gcaacgccgc cgaacagatg cccgcccttg ttcaaacaca aggcaaaccc
    17821 gacatcgtct atctcgaccc catgtatccc gaacgccgca aaagtgccgc cgtcaaaaaa
    17881 gaaatggcct acttccaccg gctcgtcggc gaggcgcaag atgaggccgt cctcctccat
    17941 accgcacgcc aaacggcaaa aaaacgcgtc gtcgtcaaac gcccccgcct cggcgaacac
    18001 cttgccggac aagcccctgc ctaccaatac acaggcaaaa gcacccgctt cgacgtttac
    18061 ctgccctacg aagcggacaa gggataacgc ccataaaaca agacaccgaa aaatttgccg
    18121 ttcttatgca aacgagaaac cggtttttgc gtttcgactg ttttggataa atcatcacac
    18181 cttaaagttt gtcattccca cggaagtggg aatctagaaa tgaaaggcaa caggaattta
    18241 tcgtaaatga ctgaaaccga acggactaga ttcccgcctg cgcgggaatg acgatgtaaa
    18301 attatccggg attcaaaaag acagactttc gcgtccgtgg gaatgactgc ggaaagatga
    18361 tttttatttt gtcataaaaa tccgcacctt aatcagttgg cggttaaatc aaacttttag
    18421 ggtgcagatt actttttatg atttcagacg gcattttgac aggccgcaaa cctatttcgg
    18481 caataccaaa aacttaatca gcagttcttt gaatacaaaa ccgaacacgc ccaagcccaa
    18541 aaccaaaaac aaaatggcga tgccgaattt gcctgctttg gactccttgc ccaaattcca
    18601 aacgataaaa cccaaaaaaa taatcaagcc ggtcaggcag attttcaacg cccaatcggc
    18661 aaaaaccgct tcatccatat ttttttccta ttgttgatgt gtatgccata taagataagg
    18721 gtttcagacg gcatctgctg tccaatgccg tctgaaacac gcaatcagcg tgcgagtgcc
    18781 tgtttcaaat cgtcaatcaa atcgccaaca tattccaaac cgaccgacag gcgcaccaat
    18841 ccggggcgga tgttggcggc gagtttttct tcgggctgca tcctgccgtg cgtggttgtc
    18901 cacggatggg tgatggtcga gcgcacgtcg ccgaggttgg cggtacggga aaagagttcc
    18961 acgccgtcca cgactttcca cgcggctgct tggtcggcga cttcaaagcc gatgacgatg
    19021 ccgccgccgt tttgctgttt gcggataagc gccgcctgcg gatggtcggg caatccggtg
    19081 tagtacacgg cttgaacctg cggctgcgct tgcagccatt gtgcgatttt cagggcgttg
    19141 tcgaactgtt tttccatacg cagcgacagg gtttccacgc cgctcaacaa ctgccacgca
    19201 ttaaacggcg acatcgccag cccgcaagag ttgcagtaaa cggcggcctg cgccatcaat
    19261 tcttccgaac ccgccaacac gccgcccatc acgcgtccgt gtccgtctat ggctttggtc
    19321 gcggaggaaa cggaaatatc cgcgccgtgt ttcaaaggct gcgagccgac gggcgacagc
    19381 aggctgttgt ccaccaccaa aatcgcgccg atgccgtgcg ccaattccgc caaggcttcc
    19441 aagtcggcca cttcgcccaa gggattggac ggcgtttcca aaaacagcag tttggtgttg
    19501 gctttgacgg cggctttcca ttcgtttata tcagtcggcg acacgtggct cacttcgatg
    19561 ccgaatttgg taacgatgtt attgataaag ccgacggtcg tgccgaacag gctgcggctg
    19621 gaaaccacgt ggtcgcccgc ctgcaaaaag gtgaaaaacg ccgcctgaat cgcagacata
    19681 cccgtcgaag tggcgaccgc gcgttccgca ccttccaaag cggcgatgcg tttttcaaag
    19741 gcggctgtgg tcgggttggc ggtacgggta taagtgaacc ctttgatttt ttttgaaaac
    19801 aaatcggcag cgtgttgggc gttgtcccac atgaagctgc tggtcagaaa caatgcctga
    19861 ttgtgttcgc ggtattcggt ttgttctttg ccgccgcgta tggcgagcgt ttgcggatgg
    19921 agttttttgc tcatcggtga ttcctcggtt ttgtccgttc ggcaacggag cgtgcgcccg
    19981 ttgtttaatt tgttaatatt ttgcgcctgt tctatgatgc tttcaagtcg gatgagaatg
    20041 caaatgccgt ctgaaacggc tttcagacgg catggcaatc agcgtttgta ttttaactcg
    20101 tacttgatgt cgttgaggat tttgcggaca tcgtgttcca acacgtcttc gactaccgcc
    20161 cccgcctgct cgtgcagcat ctgctggagc tgataggtga aaaccgccat ctgcttttgc
    20221 accgccgttc ggatgatgcc gttgacggta tcggtcagat gcgggcgcag gcgtttgatc
    20281 agccgttcgg tcagctcctg ttcggacagg cagaacactt cgcgccggtt gacggctttc
    20341 gggttcagga tattgatttg gacgggcatc aacgcctctt ccgcaccgcc ttcgccgttt
    20401 tccgcaaccc cgtctgccgc cgtacccgat tctgccgcat cggcgttttc cctgccttca
    20461 atctgtccgg tttcaaattc ggcactgtct ttttgggcat cgaaccggat tctccgccgc
    20521 gattcgatgt gtttttccga aaccgacatt tgcagggaag cctgcgcgtt gagccagttt
    20581 tcctgaagga caatcatcgg gtcggtttcg acttcctcgc cgcaatcggc aacggcggca
    20641 ttgtgttcct cctgccattt tttcagatac gccttcaaca cacgggctcg gctctcatcg
    20701 tccagtttcg gcacaggcgc gtccgttccg gtttcagagg ggcgggacag cggcgcgtaa
    20761 gtcggcactg ccttcatacg gcgcgtctga cgcaggtttt ccaaacgttt ttcccaattc
    20821 ggctctttat tcgcatccat tttcggcttc cggttcttaa tctttgcaag cagacaaacc
    20881 cgcgcccaaa gcgcggtttg atataatggc gcattttaac agattcgcga ggatacatca
    20941 tgggcagcat cgaacagcgt ttggaatatc tggaagaggc gaacgacgtg ctgcgtatgc
    21001 agaaccacgt cctgtccacc gcattcaaag ccttaatccg cgcccttccc gccgaaaccg
    21061 ccgaaatcgc ggtcgagtcg attcagcttg cttttgagga cgccttggca gaattgagct
    21121 atgaggacag cccccatacc gatttgttcc acgacgttac ttatgcgttt ttccgtgaaa
    21181 aagaacgtta attttatgtt aaactgattt tttaggcttt ttgattaccg aaaggaattt
    21241 tgatgaatat gaaaaaatgg attgccgccg cccttgcctg ttccgcgctt g
//
LOCUS       DAWITQ010000018        20687 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.018, whole genome shotgun sequence.
ACCESSION   DAWITQ010000018 DAWITQ010000000
VERSION     DAWITQ010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20687)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20687)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20687
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.018"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(63..239)
                     /locus_tag="WIX18_000574"
     CDS             complement(63..239)
                     /locus_tag="WIX18_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237722.1"
                     /translation="MKSRRFFKALLLIAALVGAFYAGMQTQAYLYEDLCLDLGGGKNP
                     GSYPICVIGKVSAR"
     gene            complement(242..1600)
                     /locus_tag="WIX18_000575"
     CDS             complement(242..1600)
                     /locus_tag="WIX18_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HEZ5237723.1"
                     /translation="MKPLDLNFICQALKLPMPSESKPVSRIVTDSRDIRAGDVFFALA
                     GGRFDAHDFVEDVLAAGAAAVVVSREDCVAMDGALKVDDTLAALQTLAKVWRENVNPF
                     VFGITGSVGKTTVKEMLAAVLRRRFGDNAVLATAGNFNNHIGLPLTLLKLNEKHRYAV
                     IEMGMNHFGELAVLTQIAKPDAALVNNAMRAHVGCGFDGVGDIAKAKSEIYQGLCSDG
                     MALIPQEDANMAVFKTATLNLNTRTFGIDSGDVHAENIVLKPLSCEFDLVCGDERAAV
                     VLPVPGRHNVHNAAAAAALSLAAGLSLNDVAEGLKGFSNIKGRLNVKSGIKGATLIDD
                     TYNANPDSMKAAIDVLARMPAPRIFVMGDMGELGEDEAAAMHAEVGAYARDQGIEAAY
                     FVGDNSVEAAEKFGADGLWFAAKDPLIQVLRHDLPERATVLVKGSRFMQMEEVVEALE
                     DK"
     gene            complement(1725..3371)
                     /locus_tag="WIX18_000576"
     CDS             complement(1725..3371)
                     /locus_tag="WIX18_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HEZ5237724.1"
                     /translation="MKQSARIKNMDQTLKNTLGICALLAFCFGAAIASGYHLEYEYGY
                     RYSAVGALASVVFLLLLARGFPRVSSVVLLIYVGTTALYLPVGWLYGAPSYQIVGSIL
                     ESNPAEAREFVGNLPGSLYFVQALFFIFGLTVWRYCVSGGVFADVKNYKRRSKIWLTI
                     LLTLILSCAVMDKIASDKDLREPDAGLLLNIFDLYYDLASAPAQYAAKRAHILEAAKK
                     ASTWHIRHVAPKYKNYVVVIGESARSDYMNVYGFPLPDTPFLSQTKGLLINGYQSTAH
                     ATNLSLPQTLGLPGEPNNNIVSLAKQAGFRTAWLSNQGMLGHFANEISTYALRSDYPW
                     FTQRGDYGKSAGLSDRLLLPAFKRVLIGNAGTKPRLIVMHLMGSHSDFCTRLDKDARR
                     FQYQTEKISCYVSTIAQTDKFLEDTVKILNENKESWSLVYFSDHGLMHVGKGGERTLT
                     HGAWKRQSYGVPLVKISSDDTRREMIKVRRSAFNFLRGFGSWTGIETDELPDDGYDFW
                     GNVPDVPGEGNNLAFIDGLPDDPAPWYAGKGKSTKNTSKK"
     gene            complement(3394..4872)
                     /locus_tag="WIX18_000577"
     CDS             complement(3394..4872)
                     /locus_tag="WIX18_000577"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HEZ5237725.1"
                     /translation="MFSKLTPLAETGIPTLSCANAAGRLLHSDSRQIKQGDIFVACPG
                     EYADGRSYIPAAVANGAAFVFWDDDGKFAWNPEWKVPNQGIKDLKHRAGILAAQVYGN
                     VSDGLKVWGVTGTNGKTSITQWLAQAADLLGEKTAIVGTVGNGFWGALEETTHTTPAP
                     VDVQTLLYRFRQQGATVAAMEVSSHGLDQSRVNGVSFRSAIFTNLTRDHLDYHGTMEA
                     YGAIKSRLFYWHGLKHAVINVDDEYGAELAGRLKKDCPDLAVYSYGFSEHADIRITDF
                     TASSDGIEAVFQTPWGEGKCHTRLLGRFNAQNLAACVALLCANGYPLDKVLDVLEKIR
                     PASGRMDCIMNSGKPLVVVDYAHTPDALEKALATLQEIKPQGAALWCVFGCGGNRDRG
                     KRPLMGAAAVQGADKVVVTSDNPRLENPHDIINDILPAVPAPECVEADRAAAIRYAVE
                     QAAANDIILIAGKGHENYQDVQGVKHRFSDLEIVGQALLTRK"
     gene            complement(4897..6642)
                     /locus_tag="WIX18_000578"
     CDS             complement(4897..6642)
                     /locus_tag="WIX18_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEZ5237726.1"
                     /translation="MLIKSEYKPRMLPKEEQVKKPMTSNGRISFVLMAIAVLFAGLIA
                     RGLYLQTVTYNFLKEQGDNRIVRTQTLPATRGTVSDRNGAVLALSAPTESLFAVPKEM
                     KEMPSAAQLERLSELVDVPVDVLRNKLEQKGKSFIWIKRQLDPKVAEEVKALGLENFV
                     FEKELKRHYPMGNLFAHVIGFTDIDGKGQEGLELSLEDSLHGEDGAEVVLRDRQGNIV
                     DSLDSPRNKAPKNGKDIILSLDQRIQTLAYEELNKAVEYHQAKAGTVVVLDARTGEIL
                     ALANTPAYDPNRPGRADSEQRRNRAVTDMIEPGSAIKPFVIAKALDAGKTDLNERLNT
                     QPYKIGPSPVRDTHVYPSLDVRGIMQKSSNVGTSKLSARFGAEEMYDFYHELGIGVRM
                     HSGFPGETAGLLRNWRRWRPIEQATMSFGYGLQLSLLQLARAYTALTHDGVLLPVSFE
                     KQAVAPQGKRIFKESTAREVRNLMVSVTEPGGTGTAGAVDGFDVGAKTGTARKFVNGR
                     YADNKHIATFIGFAPAKNPRVIVAVTIDEPTAHGYYGGVVAGPPFKKIMGGSLNILGI
                     SPTKPLTAAAVKTPS"
     gene            complement(6703..6966)
                     /gene="ftsL"
                     /locus_tag="WIX18_000579"
     CDS             complement(6703..6966)
                     /gene="ftsL"
                     /locus_tag="WIX18_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HEZ5237727.1"
                     /translation="MNKLNFLLLLAVCVSAFSVVMQQNQYRLNFTALDKAKKQEIALE
                     QDYAQMRLQQARLANHEAIRAAAEKQNLHPPVSGNTFMVAHQR"
     gene            complement(6963..7949)
                     /gene="rsmH"
                     /locus_tag="WIX18_000580"
     CDS             complement(6963..7949)
                     /gene="rsmH"
                     /locus_tag="WIX18_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEZ5237728.1"
                     /translation="MSGAESYRHITVLLNEAVDALAVREDGVYVDGTFGRGGHSRLIL
                     SRLGDAGRLIVFDKDPQAIAVAEELARSDKRVGVVHGGFASFQTALDGLGIGKVDGAL
                     FDLGISSPQIDDGSRGFSFRFDAPLDMRMDTTRGMSAAEWIAVASEQDLHEVIKNYGE
                     ERFSRQIARAIVAQRAESPIDTTRKLAQIVAQNVRTRERGQDPATRTFQAIRIFINRE
                     LEEVGAVLPQVMCRLKEGGRLAVIAFHSLEDRIVKQFVKKYSQHAPLPRWAAVREADL
                     PEPPLKIAGRALKPGEAEIAANPRARSAVLRVAERTAGPIPEQSQRKTSEWQ"
     gene            complement(7946..8401)
                     /gene="mraZ"
                     /locus_tag="WIX18_000581"
     CDS             complement(7946..8401)
                     /gene="mraZ"
                     /locus_tag="WIX18_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HEZ5237729.1"
                     /translation="MFGGAHELSIDSKGRLAVPAKFRDILSRLYTPAVVVTLESKHKL
                     LMYPVAEWEKVAAQLLNLKVADNPVLRRFQNLLLHNAEILEWDSAGRVLLPAGLRKRV
                     DFDREVVLVGRANRLELWGREQWEAEMVQALDDDPDELAFQLGQTDLQL"
     gene            8680..9897
                     /locus_tag="WIX18_000582"
     CDS             8680..9897
                     /locus_tag="WIX18_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ5237730.1"
                     /translation="MTAPVPTCNMSGNPINLHKLTLIMPLPLPSPEARQFSLKLQTLI
                     AEKIGKHGNWIPFSRFMELVLYAPQYGYYTGGSHKIGNTGDFITAPTLTSLFAQTLAR
                     QLQELLSQTAGNIYEFGAGTGQLAADLLGSISDGISRYYIIEISPELAARQKNLIQAR
                     APEASQKVVHLTALPEAFDGIIIGNEVLDAMPVEIVRKNEGGSFEHVGVCLDNDRFTY
                     SARPLHDLQLSALASLYFPQTDYPYTSELHPQQYAFIRTLASRLERGGMIFIDYGFDA
                     AQYYHPQRNQGTLIGHYRHHVIHNPFDFIGLADLTAHVNFTDIAQAGTDAGLDLTGYL
                     PQSHFLLNLGITELLAQVGKTDSPAYIREAAAVQKLIDQHEMGELFKVIAFGKNIGVD
                     WAGFRFGDICHKL"
     gene            10029..10105
                     /locus_tag="WIX18_000583"
     tRNA            10029..10105
                     /locus_tag="WIX18_000583"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10063..10065,aa:Met,seq:cat)
     gene            10113..10188
                     /locus_tag="WIX18_000584"
     tRNA            10113..10188
                     /locus_tag="WIX18_000584"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10146..10148,aa:Ala,seq:ggc)
     gene            complement(10479..11300)
                     /locus_tag="WIX18_000585"
     CDS             complement(10479..11300)
                     /locus_tag="WIX18_000585"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEZ5237731.1"
                     /translation="MDFLIVLKALMMGLVEGFTEFLPISSTGHLIVFGNLIDFHSNHK
                     VFEIAIQLGAVLAVVFEYRQRFSNVLHGVGKDRKANRFVLNLAIAFIPAAVMGLLFGK
                     QIKEHLFNPLSVAVMLVLGGFFILWVEKRQSRAEPKIADVDALRPIDALMIGVAQVFA
                     LVPGTSRSGSTIMGGMLWGIERKTATEFSFFLAVPMMVAATAYDVLKHYRFFTLHDVG
                     LILIGFIAAFVSGLVAVKALLKFVSKKNYIPFAYYRIVFGIVIIILWLSGWISWE"
     gene            complement(11333..11977)
                     /locus_tag="WIX18_000586"
     CDS             complement(11333..11977)
                     /locus_tag="WIX18_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEZ5237732.1"
                     /translation="MKLKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQEQSGKIE
                     VLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHVVWQPEMLGLARMAAAVNLSGL
                     KYQANPAVFKAVYEQKIRLENRAVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQK
                     LTEQYGIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK"
     gene            complement(11980..12825)
                     /gene="ftsN"
                     /locus_tag="WIX18_000587"
     CDS             complement(11980..12825)
                     /gene="ftsN"
                     /locus_tag="WIX18_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HEZ5237733.1"
                     /translation="MNKFSQSGKGLSGFFFGLILATVIIAGILFYLNQSGQNAFKIPV
                     PSKQPAETEILKPKNQPKEDIQPEPADQNALSEPDAATEAEQSDAEKAADKADEVEEK
                     AGEPEREEPDGQAVRKKVLTEEREQTVREKAQKKDAETVKKQAVKPSKETEKKAPKEE
                     KKAEKEKVAPKPTPEQILNSGSIEKARSAAAKEVQKMKTSDKAEATHYLQMGAYADRR
                     SAEGQRVKLAILGISSKVVGYQAGHKTLYRVQSGNMSADAVKKMQDELKKHEVASLIR
                     SIESK"
     gene            complement(12931..14427)
                     /locus_tag="WIX18_000588"
     CDS             complement(12931..14427)
                     /locus_tag="WIX18_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HEZ5237734.1"
                     /translation="MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKE
                     SRDRVRAAIIQSGFEFPAKKITVNLAPADLPKESGRFDLPIAIGILAASGQVAPEKLA
                     EYEFAGELALSGLLRPVRGALAMAWQGMQAKRAFVLPEENAGQAAVMRGITVYGARSL
                     GEVAAHLNGIEPLVQTDCQVPQMPSENTKLLDLVDVKGQHTARLALEIAAAGGHSLLM
                     MGPPGTGKSMLSQRLPGILPPLTEDELVEVWALRSLLPNHQQQLDSNRPFRSPHHSAS
                     AAAMVGGGSDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPLENGEIHISRAARQA
                     VYPAKFQLVAAMNPCPCGYLGHPVKPCRCTPESVARYRSKISGPLLDRIDLTIEVPSL
                     SAAELMQQEAGESSVSVLERVIAARDKQYARQGKVNAALSVSELDTSARIQKEAQEAL
                     GGLLEKLSLSARSFHRIMRVARTLADLAGDEEVGRSHVMKAIGFRRAL"
     gene            complement(14441..14761)
                     /locus_tag="WIX18_000589"
     CDS             complement(14441..14761)
                     /locus_tag="WIX18_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003763371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HEZ5237735.1"
                     /translation="MFGKQLFEEVGSKISETIANSPAKDVEKNIKAMLGGAFNRMDLV
                     TREEFDIQQQVLIKTRTKLAALEARLAKLEAAQNPERAALEAAEAAAEEAVAEIRQQT
                     EAGE"
     gene            15244..16770
                     /gene="putP"
                     /locus_tag="WIX18_000590"
     CDS             15244..16770
                     /gene="putP"
                     /locus_tag="WIX18_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HEZ5237736.1"
                     /translation="MNPMYITFAIYLVAVLLIGLAAYFSTRNFDDYILGGRSLGPFVT
                     AMSAGASDMSGWLLMGLPGAIYLSGLNEAWIAIGLLVGAYFNWLLVAGRLRVHTEYAN
                     NALTLPDYFFHRFGAGGHLMKVVSALIILFFFTIYCASGIVAGATLFQSLFEGMTYNQ
                     AMWLGAGATIAYTFLGGFLAVSWTDTLQASLMIFALILTPVMVYLGLGGAEQMSAAIQ
                     SVAAGTGKEYGSLFAGTTVIGIISTAAWGLGYFGQPHILARFMAAESAKSLVSARRIG
                     MTWMALCLAGAVAVGYFGIAYFGANPDKVSSMSGNHERIFIALSTLLFNPWIAGIILS
                     AILAAVMSTLSCQLLVCSSAITEDFYKGFLRKNAQQSELVWVGRLMVLAIAVISILIA
                     SDPNSKVLGLVSYAWAGFGAAFGPIVILSVLWKRITAYGALSGMVAGALTVVVWAEWI
                     KKPAQAAGESGLLTMYEIVPGFIVCLIIAVLVSLFNKEPSREIQKRFEKADADYRAAR
                     "
     gene            complement(16860..17027)
                     /locus_tag="WIX18_000591"
     CDS             complement(16860..17027)
                     /locus_tag="WIX18_000591"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237737.1"
                     /translation="MKHFLDSPKFFGGQAASVRPEYGNIVINPQMKYKASNAGRVGAS
                     VSLKMKRVKHK"
     gene            17019..20624
                     /gene="putA"
                     /locus_tag="WIX18_000592"
     CDS             17019..20624
                     /gene="putA"
                     /locus_tag="WIX18_000592"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HEZ5237738.1"
                     /translation="MFHFAFPAQTALRQAITDAYRRNEIEAVQDMLQRAQMSDEERNA
                     ASELARRLVTQVRAGRTKAGGVDALMHEFSLSSEEGIALMCLAEALLRIPDNATRDRL
                     IADKISDGNWKSHLNNSPSLFVNAAAWGLLITGKLTATNDRQMSSALSRLISKGGAPL
                     IRQGVNYAMRLLGKQFVTGQTIEEALQNGKEREKMGYRFSFDMLGEAAYTQADADRYY
                     RDYVEAIHAIGKDAAGQGVYEGNGISVKLSAIHPRYSRAQHGRVMGELLPRLKELFLL
                     GKKYDIGINIDAEEANRLELSLDLMEALVSDPDLAGYKGIGFVVQAYQKRCPFVIDYL
                     IDLARRNNQKLMIRLVKGAYWDSEIKWAQVDGLNGYPTYTRKVHTDISYLACARKLLS
                     AQDAVFPQFATHNAYTLGAIYQMGKGKDFEHQCLHGMGETLYDQVVGPQNLGRRVRVY
                     APVGTHETLLAYLVRRLLENGANSSFVNQIVDENISIDRLIKSPFDTIAEQGIHLHNA
                     LPLPRDLYGKCRLNSQGVDLSNENVLQQLQEQMNKAAAQDFHAASIVNGKARDVGEAQ
                     PIKNPADHDDIVGTVSFADAALAQEAVGAAVAAFPEWSATPAAERAACLRRFADLLEQ
                     HTPALMMLAVREAGKTLNNAIAEVREAVDFCRYYANEAEHTLPQDAKAVGAIVAISPW
                     NFPLAIFTGEVVSALAAGNTVIAKPAEQTSLIAGYAVSLMHEAGIPTSALQLVLGAGD
                     VGAALTNDARIGGVIFTGSTEVARLINKALAKRGDNPVLIAETGGQNAMIVDSTALAE
                     QVCADVLNSAFDSAGQRCSALRILCVQEDVADRMLDMIKGAMDELVVGKPIQLTTDVG
                     PVIDAEAQQNLLNHINKMKGVAKSYHEVKTAADVDSKKSTFVRPILFELNNLNELQRE
                     VFGPVLHVVRYRADELDNVIDQINSKGYALTHGVHSRIEGTVRHIRSRIEAGNVYVNR
                     NIVGAVVGVQPFGGHGLSGTGPKAGGSFYLQKLTRAGEWVAPTLSQIGQADEAALKRL
                     EALVHKLPFNAEEKKAAAAALGHARIRTLRRAETVLTGPTGERNSISWHAPKRVWIHG
                     GSTVQAFAALTELAASGIQAVVEPDSPLASYTADLEGLLLVNGKPETAGISHVAALSP
                     LDSARKQELAAHDGALIRILPSENGLDILQVFEEISCSVNTTAAGGNASLMAVAD"
BASE COUNT         4852 a         5963 c         5050 g         4822 t
ORIGIN      
        1 cgggcctgcg cccgtttgag gttggcttgc cgcccggcaa ggtttcggac ggcttttgca
       61 gattaacgtg cagagacttt cccaatcacg caaatcgggt aactccccgg atttttgccg
      121 ccacccaagt ctaaacataa atcttcataa agatacgcct gcgtctgcat tccggcataa
      181 aacgcgccga ccagcgcggc aatcaacaat aaggctttaa aaaaacgtcg acttttcatt
      241 ttcacttatc ctccaatgcc tcgaccactt cttccatctg cataaagcgc gaacctttca
      301 ccaacacggt ggcgcgttcg ggcaaatcgt ggcgcaacac ttgaatcaac gggtctttgg
      361 cggcgaacca caaaccgtcc gcgccaaatt tttccgccgc ttcgacgctg ttgtcgccga
      421 caaaataagc cgcttcgatg ccttggtcgc gagcatacgc gccgacttcg gcgtgcatgg
      481 cggcggcttc gtcctcaccc agttcgccca tatcgcccat cacgaaaata cgcggcgcag
      541 gcatacgcgc caacacgtca atcgcggctt tcatgctgtc cgggttcgca ttataagtat
      601 cgtcaatcag ggttgcgccc ttgattccgg atttgacgtt cagacggcct ttgatattgc
      661 tgaagccttt caaaccttcc gccacatcgt tcaaactcaa acctgcagcc aaagacagcg
      721 cggcggcagc ggcggcgttg tggacattgt ggcggccggg aacaggcagc accacggcgg
      781 cgcgttcgtc gccgcacacc aaatcaaatt cgcacgacaa cggtttcagc acgatatttt
      841 ccgcgtggac atcgccgcta tcgatgccga aagtgcgcgt attcaaatta agcgttgccg
      901 ttttgaagac agccatattg gcatcttctt gaggaatcag tgccatgccg tctgaacata
      961 agccttgata aatctcgctt ttcgctttgg caatatcgcc cactccgtcg aaaccgcagc
     1021 cgacatgggc gcgcatggcg ttgttgacca atgcggcatc gggtttggcg atttgtgtca
     1081 aaaccgccag ttcgccaaaa tggttcatac ccatttcaat cacggcatag cggtgttttt
     1141 cgtttaattt caacaaagtc aacggcaatc cgatgtggtt gttgaagttg cctgccgtcg
     1201 ccaaaacggc attatcgccg aaacggcggc gcaataccgc agccagcatc tccttcaccg
     1261 tcgtcttgcc gaccgaaccg gtaatgccga acacaaacgg attcacattt tcacgccaca
     1321 cctttgccaa cgtttgcaat gcggcaagcg tgtcatcgac tttcaacgcg ccatccattg
     1381 caacgcaatc ttcgcgcgaa accacaaccg ccgccgcacc agcagccaat acgtcttcaa
     1441 caaaatcatg cgcatcaaac cgcccgcccg ccaatgcgaa aaacacatcg cccgcgcgga
     1501 tgtcgcggct gtcggttacg atgcgcgaca cgggtttgct ttcagacggc atcggaagct
     1561 tgagggcttg gcagatgaaa tttaggtcca gtggtttcat atttactttc gttaatattc
     1621 gggcggcgga cacatcggta gcggctgatt tttttatcgc ctgttttgct gtggtaaaac
     1681 acagattatt ttcccattct cattcggcat tttttctgta cgtatcattt tttagacgta
     1741 tttttagtcg atttgccttt tcccgcatac cacggcgcgg ggtcgtcggg cagtccgtcg
     1801 ataaaggcaa ggttattgcc ttcgcccggc acatcgggaa cattccccca aaaatcatag
     1861 ccgtcatcgg gcaactcgtc ggtttcgata cccgtccaac tgccgaatcc gcgtaaaaaa
     1921 ttaaacgcgc tgcgcctcac tttaatcatt tcgcgccgcg tgtcatcgga cgaaatttta
     1981 accagcggca cgccgtagct ttgacgcttc cacgcaccat gtgtcaacgt tcgctcgccg
     2041 cctttaccga catgcatcaa accgtggtcg gaaaagtaaa ccaaagacca gctttcttta
     2101 ttttcattca atatcttaac tgtatcttct aaaaatttat cggtttgcgc gatggtggaa
     2161 acatagcagg atattttttc agtttgatac tgaaaccgcc gcgcatcctt atccaaacgt
     2221 gtgcaaaaat cactgtgcga acccatcagg tgcatcacaa tcagccgagg cttcgtgcct
     2281 gcatttccta tcaaaacccg tttgaacgcc ggcaacaaaa ggcggtcgct caaccccgcg
     2341 cttttgccat aatcacccct ttgggtaaac cacggataat cgctgcgtag ggcataggtg
     2401 gaaatttcgt tggcaaaatg ccccaacatt ccttgattag acagccacgc cgtccgaaaa
     2461 cccgcctgct tcgccaagct gacgatgtta ttgttcggtt ctcccggcag ccccaaagtc
     2521 tgcggcagcg aaagattcgt cgcgtgggcg gtcgattggt aaccgtttat caacagccct
     2581 ttggtctgac tcaaaaaagg cgtatcgggc aatgggaaac cgtaaacatt catataatcc
     2641 gaacgcgcgc tctcaccgat aaccacaaca taatttttat acttgggcgc aacatgacgg
     2701 atatgccatg ttgacgcttt ttttgctgct tccaaaatgt gggcgcgctt ggcggcatat
     2761 tgtgccggcg cggaagccaa atcgtaatac aggtcgaaaa tattcaacaa caggccggca
     2821 tcaggttctc gcaaatcttt atcgctggcg attttatcca tcaccgcgca ggacaaaatc
     2881 aaagtcaata atatagtcag ccatattttg ctgcggcgtt tatagttttt tacgtcagca
     2941 aatacccccc ccgatacaca atatctccaa actgtcaagc caaaaatgaa aaataatgcc
     3001 tgcacaaaat aaagcgaccc gggaagattg ccgacaaatt cacgcgcctc ggcaggattg
     3061 ctttccaata tcgaaccgac tatctgataa gacggcgcac catacagcca gccgaccggc
     3121 aaatataggg cggttgtgcc gacgtaaatc agtaaaacaa ctgaagaaac gcgcgggaaa
     3181 ccgcgtgcca ataataataa aaatacaacc gaagccaaag cacccacggc agaataacgg
     3241 tagccgtatt catattccaa gtgataacct gatgcgatgg ccgcgccaaa acaaaaggct
     3301 aaaagcgcgc aaatgcccaa tgtatttttt aatgtctgat ccatattttt tattcgggcg
     3361 gattgtttca tacgatgccg tccgaatatc ccattattta cgagttaaca aagcctgtcc
     3421 gacgatttca agatcggaaa aacggtgctt cacgccttgt acatcctgat agttttcatg
     3481 ccctttgccg gcaatcagga tgatgtcgtt tgcggcggct tgttcaaccg cataacggat
     3541 ggcggcggca cggtcggctt cgacgcattc gggcgcggga acggcaggca ggatgtcgtt
     3601 gatgatgtcg tgcggatttt ccaagcgcgg gttgtcgctg gtgacgacga ctttatccgc
     3661 gccctgtacg gctgccgcgc ccatcagcgg gcgtttgccg cgatcgcggt taccgccgca
     3721 accgaatacg caccacaaag ccgcaccctg cggtttgatt tcctgcaagg tggcgagtgc
     3781 tttttccaat gcgtcgggcg tgtgggcata atcgacaaca accaaaggtt tgccgctgtt
     3841 cataatacaa tccatacggc ctgaagcagg acggattttt tccagtacat ccaatacctt
     3901 atccagcgga tagccgttgg cgcaaagcaa agcgacacag gcggcgagat tttgcgcgtt
     3961 gaaccgtccg agcaggcgcg tgtggcattt cccttcgccc cacggggttt ggaatacggc
     4021 ttctatgccg tctgaagaag cggtaaagtc ggtaatgcgg atgtcggcgt gttcgctgaa
     4081 gccgtaactg taaacggcca aatcggggca gtcttttttc agacgacctg cgagttccgc
     4141 gccgtattcg tcatctacat tgataacggc gtgtttcaag ccgtgccagt aaaacaggcg
     4201 cgacttgatg gcaccgtagg cttccatcgt gccgtggtag tcgaggtggt cgcgggtgag
     4261 gttggtaaag attgcgctgc ggaatgacac gccgttgacg cgcgactggt caagcccgtg
     4321 gctggagact tccatcgcgg cgactgttgc gccttgttga cggaaacggt agagcagggt
     4381 ttggacatcg acgggggcgg gtgtggtatg cgtggtttct tccaatgcac cccaaaagcc
     4441 gttgccgacc gtgccgacaa tggcggtttt ttcgcccaac aaatcggcag cttgcgccag
     4501 ccattgcgtg atggaggttt tgccgttggt tccggttacg ccccagactt tgagaccgtc
     4561 tgaaacgttg ccgtaaactt gcgccgccaa tatgccggca cggtgtttca aatctttgat
     4621 gccttgattg gggactttcc attcgggatt ccacgcgaat ttgccatcgt cgtcccaaaa
     4681 aacaaaagcc gcaccgttgg caacggcggc ggggatataa ctgcgtccgt cggcatattc
     4741 gcccggacag gcaacgaaaa tatcgccttg tttgatttgg cggctgtctg aatgcaacaa
     4801 acgccctgcc gcgtttgcac acgacagggt cgggatgccg gtttcagcca aaggggttaa
     4861 cttgctgaac ataaaacaat ctcgttgata ctcggattaa gacggtgttt tgacggctgc
     4921 ggcggtcagt ggcttggtcg gggaaatgcc caagatgttc aggctgccgc ccataatttt
     4981 tttgaagggc ggccctgcca ctacgccgcc gtaataaccg tgggcagtcg gttcgtcaat
     5041 ggttaccgcc acaatcacac gggggttttt ggcgggggca aaaccgataa aggtagcgat
     5101 gtgtttgttg tcggcataac gcccgttgac gaacttgcgc gccgtgccgg ttttcgcgcc
     5161 gacatcgaaa ccgtccaccg cacccgccgt accggtgccg cccggctcgg tcacggaaac
     5221 catcagattg cgtacctcgc gcgcggtcga ttctttgaat atgcgtttgc cttgcggcgc
     5281 aaccgcctgt ttttcaaagc tgaccggcag caaaacgccg tcgtgcgtca gtgcggtata
     5341 ggcgcgcgcc aattgcagca ggctcaattg caggccgtaa ccgaaagaca tcgtcgcctg
     5401 ttcgatgggc cgccacctgc gccaatttct caacaaacct gcagtttcgc ccggaaagcc
     5461 cgagtgcata cgcacaccga tgcccaactc atgatagaag tcatacattt cttcggcacc
     5521 gaaacgcgca gacagtttgc ttgtgccgac gttggacgat ttctgcatga tgccgcgcac
     5581 atccaaagag gggtaaacat gggtatcgcg cacgggagac ggtccgattt tataaggctg
     5641 cgtattcagc cgttcgttca aatcggtttt gcccgcatcc aatgctttcg caatcacaaa
     5701 cggtttgatt gccgaaccgg gttcgatcat atcggttacg gcacggttgc gccgctgttc
     5761 gctgtctgcc cggccgggcc tgttgggatc gtaggcgggc gtattggcca aggcgaggat
     5821 ttcccccgtg cgggcatcca aaaccaccac cgttccggct tttgcctgat ggtattcgac
     5881 cgccttgttc aactcttcat aggccaaggt ctgaatcctc tgatcgaggg aaaggatgat
     5941 gtctttgccg tttttcgggg ctttattgcg cggggagtcc aagctgtcca caatattgcc
     6001 ctgccggtcc cgcaaaacga cttccgcgcc gtcttcgcca tgcaggctgt cttcaagcga
     6061 aagttccaaa ccttcctgac ctttgccgtc aatatcggta aatccgatga cgtgtgcaaa
     6121 caggttgccc atcgggtaat ggcgttttaa ttctttttca aatacaaagt tttccaaacc
     6181 caaggctttg acctcttcgg caaccttggg atcgagctgc cgcttaatcc agataaacga
     6241 cttgcctttc tgttcgagct tgttcctcaa aacatcaacc ggcacatcga caagctcgga
     6301 caggcgttcc aattgtgcgg cagacggcat ttccttcatc tctttaggca cggcaaacag
     6361 ggactccgtc ggcgcactca acgccaaaac cgcaccgttc cggtccgaaa ccgtaccgcg
     6421 tgtagccggc aatgtttgag tccgcacaat ccggttgtcg ccctgttctt tcaaaaagtt
     6481 atacgttacc gtctgcagat acagtccgcg ggcaatcaga ccggcaaaca agaccgctat
     6541 tgccatcagg acgaagctga tccgtccgtt actggtcatc ggctttttga cctgctcttc
     6601 tttgggcagc atccggggct tatattcact cttaatcaac atttttactt ctcgttatta
     6661 ttatcctgac gcaggaatcc gattccggca cacaggctgc ttctatcttt gatgcgccac
     6721 cataaaggta ttgcccgaaa ccggcggatg gaggttttgt ttttctgccg ccgccctgat
     6781 cgcttcgtgg ttcgccaaac gcgcctgttg cagcctcatt tgcgcataat cctgctccaa
     6841 ggcgatttcc tgttttttcg ccttatccaa agctgtgaag ttgagcctgt actggttttg
     6901 ctgcatcaca acggaaaaag cggaaacgca caccgcaagc agcagaagga aattcaattt
     6961 gttcattgcc attcagacgt ttttctctgt gattgttccg gtatcggacc ggcagtccgc
     7021 tccgccacac gcaaaaccgc acttctcgcc ctcggattgg cggcaatttc cgcctcaccc
     7081 ggctttaatg ccctgcccgc gattttcagg ggcggctcgg gcaaatccgc ttccctgacc
     7141 gccgcccagc gcggcagggg cgcgtgttgc gaatattttt tgacaaactg cttcacaatg
     7201 cggtcttcca acgaatggaa agcaatgacc gccaaacgtc cgccctcttt cagacgacac
     7261 atgacctgcg gcaatactgc ccctacttct tcaagctcgc ggttaataaa gatgcggatt
     7321 gcctggaagg tgcgcgtcgc aggatcctgc ccccgctcgc gagtacggac gttttgtgcc
     7381 acgatctgcg ccagcttgcg ggttgtatcg attggacttt ccgcccgttg cgcaacaatg
     7441 gcgcgcgcaa tctggcggct aaaccgctct tcaccataat tcttgattac ctcgtgcaaa
     7501 tcctgttccg acgcaaccgc tatccactct gcggcagaca taccgcgcgt cgtatccata
     7561 cgcatatcca aaggggcatc gaaacggaag ctgaaaccgc ggctgccgtc atcgatttgc
     7621 ggggacgaaa tccccaaatc aaacagcgca ccgtccacct tgccgatacc caaaccgtcc
     7681 aatgccgtct gaaacgaagc aaaaccgcca tgcacgacac cgacccgttt gtccgaacgc
     7741 gccagctctt ctgccacagc aatcgcctgc ggatctttgt cgaaaacaat caaccgcccc
     7801 gcatcgccca aacgcgacaa aatcagccgg gaatgccctc ccctgccgaa cgtaccgtcc
     7861 acatagacac cgtcttcgcg cacggcaagc gcatccaccg cctcattcag caagaccgtg
     7921 atatgccggt aactttctgc tccactcaca attgcaaatc cgtctgaccc aactggaagg
     7981 caagttcgtc aggatcgtca tccaaagcct gaaccatctc agcctcccac tgctcgcgac
     8041 cccaaagctc caaacggttg gcacgaccga ccaaaacgac ttcacggtcg aaatccaccc
     8101 ttttcctcag tccggcagga agcagcaccc ggccggcgct gtcccattcc aaaatttccg
     8161 cgttatgcag caaaagattt tgaaaccgcc gcaaaacagg gttatccgcc acttttaagt
     8221 ttaaaagttg cgccgcaacc ttttcccact ccgcaacagg gtacatcaac agcttgtgtt
     8281 tcgactcgag cgttaccact acggcaggcg tatagaggcg cgacagaatg tcacggaatt
     8341 tggcaggaac agccaaccgc cccttactgt cgatgcttaa ttcgtgtgcg ccgccgaaca
     8401 tgacatgtcc caagccgaaa tcaaaatcac aagggtaaaa gagacacttt gccccacaat
     8461 tccccaccaa tcgacactat aagaaatttt aaacactcgg tcaaatcagg gcatgaaaac
     8521 tcattaacat atctgaaatt tttattcctt ttaaaaacaa taagataaaa aatgacgaca
     8581 acggcacggc gggtgcggta cagaataatc gaaccaataa acaactatat atgattaatt
     8641 taataatata aacacaatat atagtattaa gataaagcca tgacagcacc cgtaccaacg
     8701 tgtaatatgt cgggaaatcc aataaattta cacaagctaa cacttatcat gcccctccct
     8761 ctcccctctc ccgaagcacg gcaattctcg ctcaaactgc aaaccctcat tgccgaaaaa
     8821 atcggcaaac acggcaactg gattccattt tcacgtttta tggaattggt tttatacgct
     8881 ccgcaatacg gctactacac cggcggcagc cataaaatcg gcaataccgg ggattttatt
     8941 accgcaccga ccctcacctc tctgtttgca cagacactgg cacgccaact tcaagaactt
     9001 ctatcccaaa cggcgggcaa tatctatgaa ttcggcgcgg gaaccggaca gcttgccgcc
     9061 gatttgttgg gcagcatttc ggacggcatc agccgttact atattattga aatatcgccg
     9121 gagctggcag cacgtcagaa aaacctgatt caagcacgcg caccggaagc atctcaaaaa
     9181 gttgtccact tgaccgcact tcccgaagcg tttgacggca tcatcatcgg caacgaagta
     9241 ctcgatgcca tgcctgtcga aatcgtccgt aaaaatgaag gcggctcatt cgagcatgtc
     9301 ggcgtttgcc tagataatga ccgttttacc tattcggcac gaccgctgca cgacttacag
     9361 ctatctgcct tggcttccct ctattttcct caaacagatt atccctacac cagcgaacta
     9421 catccgcaac aatatgcctt tatccgcacc cttgcctcaa ggcttgaacg cggaggtatg
     9481 atattcatcg actacggttt tgatgcagcg cagtattacc accctcaacg caatcaaggt
     9541 actctgatcg gacactaccg acatcacgtt atccacaatc cttttgactt catcgggttg
     9601 gccgacctga ccgcgcatgt caactttacc gacattgccc aagccggtac ggatgcagga
     9661 ctggatttga caggctatct gccccagtcc cattttctgc tgaatctggg cataaccgaa
     9721 ctgttggcac aagtgggaaa aacagactcg cccgcctaca tccgtgaagc tgctgccgtt
     9781 cagaaactga ttgaccagca tgaaatggga gaattgttta aagtcatcgc attcggtaaa
     9841 aatatcggcg tcgactgggc aggattccgc ttcggcgaca tctgccacaa actctaaccc
     9901 tcatgccgcc tgaatccgct tcagacgaca taaacttttt aacatttaaa aacagtcaac
     9961 taattcaaaa ttaaaaaata cggcttgtca aaaaaacaga aaaacatata atagtgtctt
    10021 cacgaaacgg cgaattagct cagtcggtta gagcagagga atcataatcc ttgtgtccgg
    10081 ggttcgaatc cctgattcgc caccaaattt tcgggggtat agctcagttg gtagagcgct
    10141 tgcatggcat gcaagaggtc agcggttcga tcccgcttac ctccaccaga taaaaaagca
    10201 cagaccgtaa aaaggtatgt gcttttttat tacctgattg ccgggaaata aagaacaaac
    10261 cactgccttc aaaacaggca atcgacttta aacctatcgc cccgcctgtc ctgattttat
    10321 agtgaattaa atttaaaccg gtacagcgtt ggctcgcctt gccgtactat ctgtactgtc
    10381 tgcggcttcg tcgccttgtc ctgatttttg ttaattcact atatcagccc gccagacaaa
    10441 cccgacccga ataatgtctt caggtcgggt ttatggtttc attcccaact tatccagccc
    10501 gacaaccaca atattatgat gacgatgccg aaaacaatgc ggtaataggc aaacgggata
    10561 tagtttttct tggaaacaaa cttcagcagt gctttgaccg ctactaaacc ggaaacaaaa
    10621 gcggcaataa agcctatcag aatcaaaccg acatcatgca gggtgaaaaa ccggtaatgt
    10681 ttcaggacat cataagccgt tgcggcaacc atcatcggaa cggccaagaa aaatgaaaac
    10741 tccgttgccg ttttccgctc gattccccaa agcatcccgc ccataatcgt actacccgaa
    10801 cgggacgtac ccggaaccag tgcaaacact tgggcaacgc cgatcatcaa cgcatcaatc
    10861 ggacgcaatg catcaacatc ggcaatttta ggctctgccc ggctttggcg tttctccacc
    10921 cacaaaataa aaaaaccgcc caaaaccagc atgaccgcca cactcaaagg attgaacaga
    10981 tgttctttaa tctgtttgcc gaacaacagc cccatcacgg cggcaggtat aaaagcaatg
    11041 gcaagattga ggacgaagcg gttggctttc cggtcttttc ccacgccatg caacacattg
    11101 ctgaaacgct gccggtattc aaacactacc gccaaaactg caccgagctg gatggcaatt
    11161 tcaaaaacct tgtgattgct gtgaaaatca atcagattgc cgaacacaat caaatgtccg
    11221 gtgctggaaa tcggtaaaaa ttcggtaaaa ccttctacca agcccatcat cagggctttc
    11281 aggacaatca gaaaatccat tgcttgcgct tctttcggat acgggagttc ggctatttct
    11341 gtacagcagg ggtctgacgc ttgcgttctt ccctgacttt ggcaaccaat tctttaatcg
    11401 tatgaacgcc gccgtcaaag ccattattga agataacgcg gtattttccg ccgacaataa
    11461 cggtcggcgt gctgtcaata ccatattgtt ccgtcagttt ctgcattttt aatgcggcgg
    11521 cggcagcttc gggggaatca taggcgcgca tcagtttttt gccgtcaaag cctttttgag
    11581 acaaagccca ttttccggca acagccctgt tttccaagcg gattttttgt tcgtaaactg
    11641 ctttaaacac agcagggttt gcctgatatt tcaaacccga caaattgacg gcagccgcca
    11701 tcctggccag accgagcatt tcaggctgcc agaccacgtg ctccgtcctc aaataggcat
    11761 cagacggcaa tgccttgccc aatttcaata acaaaggatc gaaatgatgg caatgtacgc
    11821 agaaatagcc gaaaaattcc aaaacctcaa ttttacccga ctgttcttga ggaatgggtt
    11881 tatccaacac aagatagtct tccccttccg tcagggcata tgcctgcgcg gacaacactg
    11941 ccgacagcag cagcggcaac agatgtttga gcttcataat tatttgcttt cgatagaacg
    12001 gatcaggctg gcgacttcat gttttttcaa ctcgtcctgc atttttttca ccgcatcggc
    12061 agacatattg ccgctttgca cccggtaaag cgttttatgt cccgcctgat aaccgaccac
    12121 cttggaagat atgcccaaga ttgccagttt gacacgctgc ccttccgcgc tccggcggtc
    12181 ggcatacgcg cccatttgca gataatgcgt tgcttccgcc ttgtcggacg ttttcatttt
    12241 ctgcacttct ttggcggcgg cactgcgcgc tttttcgatg ctgccgctgt tgaggatttg
    12301 ttccggggtc ggtttgggtg caactttttc cttttccgcc tttttctctt cttttggagc
    12361 ttttttctct gtttctttag acggttttac cgcttgtttt ttaaccgttt cggcatcttt
    12421 cttctgcgct ttttccctga cggtttgttc acgctcttcc gtcagcactt tcttacgcac
    12481 tgcctgtccg tccggctctt cccgttccgg ctcgcccgcc ttttcttcaa cctcgtcggc
    12541 tttatcggca gctttttccg catccgactg ctctgcctct gtcgcagcat ccggttcgga
    12601 caaggcgttt tgatcggccg gttcaggttg gatgtcttcc ttaggctggt ttttcggttt
    12661 caggatttcc gtttctgcag gctgcttcga cggaaccggg attttgaacg cattttgacc
    12721 gctctggttc agataaaaca aaataccggc aataatgacc gtcgccagta tcaaaccgaa
    12781 gaaaaaaccg gacagacctt ttccggattg ggaaaatttg ttcataaaca taccttaatg
    12841 tgtttcagac ggcattaacg ccgtttgctt acgggcggat attctaacaa tatcgccata
    12901 tttgggcaaa acctgcttcc attcccgttc ctataaagcg cgacggaaac ctatggcttt
    12961 catgacgtgg cttctgccga cttcttcgtc gcccgccaaa tccgccaatg tacgcgccac
    13021 gcgcataatg cggtggaagc tgcgggcgga aagggagagt ttttccagca ggccgcccaa
    13081 tgcttcctgc gcttcttttt gaatgcgggc ggatgtgtcg agttcactga cactcaaggc
    13141 ggcattcact ttgccttgcc gtgcgtattg tttgtcgcgg gcggcgataa cgcgttccaa
    13201 aacggacacg ctgctttcac ccgcttcctg ctgcatcagt tcggcggcgg acaggctggg
    13261 gacttcgatg gtcaaatcga tgcggtcgag cagcgggccg gaaattttgc tgcggtaacg
    13321 cgcgacgctt tcgggcgtgc agcggcaggg tttgacggga tgcccgagat agccgcacgg
    13381 gcaggggttc atggcggcga caagttggaa tttggcggga tagacggctt ggcgcgccgc
    13441 tcgggaaatg tggatttcgc cgttttccaa cggttcgcgc aaaacttcca aaactttgcg
    13501 gtcgaactcg ggcaattcat ccaaaaataa aacgccgtga tgcgccaatg aaatttcgcc
    13561 cggacgcgga tccgaaccgc cgccgaccat agccgccgcg ctggcgctgt gatgcggact
    13621 gcggaaagga cggttgctgt cgagttgttg ctggtggttg ggcaggagcg aacgcaatgc
    13681 ccaaacttct accaattcgt cttcggtcag cggcggcagg atgccgggca gccgttggga
    13741 gagcatagac ttgcccgttc ccggcggacc catcatcaaa aggctgtgtc cgcctgcggc
    13801 agcgatttcc aaagcaaggc gggcagtgtg ctgacccttg acatcgacga ggtcgagcaa
    13861 tttggtgttt tcagacggca tctgaggaac ttgacagtcg gtttgcacca aaggttcgat
    13921 accgttcaaa tgggcggcga cttcgcccaa agagcgcgcg ccgtaaacgg taatgccgcg
    13981 catcacggcg gcttgtcctg cgttttcttc aggcaaaaca aatgcacgtt ttgcctgcat
    14041 accctgccac gccatcgcca acgcgccacg cacggggcgc aacagccccg acagtgccaa
    14101 ttcccccgca aactcgtatt ccgccagttt ttcgggtgca acctgccccg atgcggcaag
    14161 gatgccaatt gcaatcggca aatcgaaacg ccccgactct ttgggcaggt cggcgggggc
    14221 gaggttgacg gtaatttttt tggcggggaa ttcaaaaccg ctttgaataa tggcggcacg
    14281 gacgcggtcg cgactttcct ttacttccgt atcgggcagc ccgacgatgt tgaaatgcgg
    14341 caggccgttg gcaaggtggg cttccacttc gaccaacggc gcattcatac cgctcaaggc
    14401 gcggctgtaa accaaggcaa gcgacatatt tcagacggcc ttattcgccg gcttcggttt
    14461 gctgcctgat ttcggcgacg gcttcttcgg cagcggcttc agccgcttcc aatgctgccc
    14521 gttcgggatt ttgcgcggct tcgagttttg ccaaacgcgc ttccaaagcc gccagtttgg
    14581 tacgagtttt gattaaaacc tgctgctgga tgtcgaattc ttcgcgcgta accagatcca
    14641 tacggttgaa cgcgccgccc agcatcgcct taatattttt ttccacatct ttggcagggc
    14701 tgttggcgat ggtttcgctg attttcgaac cgacttcttc aaaaagctgc ttgccgaaca
    14761 taatctgtat ccttcctgaa catatcaaat tcaatcggct attgtataag gaaaaatgcc
    14821 gtctgaaaac gggcggcgga taatcggcaa aacataccgc gcctcctttg cggttgctaa
    14881 attacacctc aaaacacctg ccgcctgaaa acggatttca tattccgcgc aacgccagat
    14941 tacaagacat tacaaaacaa tatactgttt taaatgattt ttccgacgcg catcgtttca
    15001 aactcggctt tttaagccat taagtgcttt gcaaacaaca gaaattgggt tatgctgaaa
    15061 cggattattt acaatttcat atagttttat tacatatctt attgtgattg aagataattt
    15121 atccgaatcc ccctttcggg tatccggatt ttccgttgta cttttattag aaaaacattt
    15181 caggcgcaag ttgcttgcaa tttcaaagcc tgtaattctg aagttttaga cgaggaatag
    15241 cacatgaatc ccatgtacat tacttttgca atctatctgg ttgcagtcct tctcatcggg
    15301 cttgccgcct atttttctac gcgcaatttc gacgattata ttttgggcgg gcgcagccta
    15361 ggcccgtttg ttaccgcgat gtcggcaggc gcgtccgata tgtccggctg gctgctgatg
    15421 ggtctgccgg gcgcgattta tttgagcggt ttgaatgagg cttggattgc catcggcctc
    15481 ttggtcggcg cgtatttcaa ctggctcttg gtggcgggcc gcctgcgcgt gcataccgaa
    15541 tacgccaaca atgcgctgac gctgccggat tatttcttcc accgcttcgg cgcgggcgga
    15601 cacttgatga aagtggtttc cgcactgatt atcctgttct tcttcacgat ttattgcgcc
    15661 tcgggcattg tggcgggcgc aaccctgttc caaagcctgt ttgaaggtat gacttacaat
    15721 caggcaatgt ggctgggcgc gggcgcgacc atcgcctata ccttcttggg cggcttcttg
    15781 gcggtcagct ggacggatac gttgcaggct tctttgatga ttttcgcgct gattttaacg
    15841 ccggtaatgg tctatctggg cttgggcggc gcggaacaga tgtctgccgc gattcaaagc
    15901 gtcgccgcag gcacgggcaa agaatacggc agcctgtttg ccggtacgac cgtcatcggc
    15961 atcatttcca ccgccgcatg gggcttgggc tatttcggac agccgcacat tttggcgcgc
    16021 tttatggcgg ccgaaagcgc gaaatcgctg gtatccgcac gccgcatcgg catgacttgg
    16081 atggcgttgt gccttgcggg cgcggtggcg gtcggttatt tcggcattgc gtatttcggt
    16141 gcaaatcccg acaaagtttc ttctatgagc ggcaaccacg aacgcatctt catcgcgctt
    16201 tccaccctgc tgttcaaccc ttggatcgcc ggcatcattt tgagcgcgat tttggcggcg
    16261 gtgatgtcca ccctgtcctg ccagcttttg gtttgctcca gcgcgattac cgaagacttc
    16321 tacaaaggct ttttgcgtaa aaacgcgcaa cagtcggaac tggtatgggt cggccgcctg
    16381 atggtcttgg cgattgccgt gatttccatc ctgattgctt ccgatccgaa cagcaaagta
    16441 ttgggactgg tgtcttatgc gtgggcaggt ttcggtgcgg cgttcggccc gattgtgatt
    16501 ctgtccgtat tgtggaaacg catcactgcc tacggcgcgt tgtcgggtat ggttgcaggt
    16561 gccttaaccg tagtcgtatg ggcggaatgg ataaaaaaac cggctcaagc agcaggcgaa
    16621 agcggcttgt tgacgatgta cgaaatcgtc ccgggcttta ttgtttgctt aatcattgcc
    16681 gtgttggttt ccctgttcaa caaagaacct tcgcgcgaaa tccaaaaacg ctttgaaaaa
    16741 gccgacgcag attaccgcgc cgcccgataa acccctttca gacggcacgg catcccggtt
    16801 cgtgccgtct gaacccgttt ccgggtcaaa cacaaataaa ccttgcctgc atacaggcct
    16861 tatttgtgtt ttacccgttt cattttcaaa gaaacggaag cacctaccct gcccgcattt
    16921 gaagccttgt atttcatctg cggatttatt acgatattac cgtattcagg ccgcaccgat
    16981 gccgcctgcc ccccgaaaaa ctttggagaa tccaaaaaat gtttcatttt gcatttccgg
    17041 cacaaactgc cctgcgccaa gcgataaccg atgcctaccg ccgtaatgaa atcgaagccg
    17101 tacaggatat gttgcaacgt gcacagatga gcgacgaaga gcgcaacgcc gcctccgagc
    17161 ttgcccgccg tttggttacc caagtccgcg ccggccgcac caaagccggc ggcgtagatg
    17221 cgctgatgca cgagttttca ctctccagcg aagaaggcat cgcgctgatg tgtctggcag
    17281 aagccctgct gcgtatcccc gacaacgcca cgcgcgaccg cctgattgcc gacaagattt
    17341 cagacggcaa ctggaaaagc catttgaaca acagcccttc cctcttcgtc aacgccgccg
    17401 cctggggcct gctgattacc ggcaaactga ccgccacaaa cgacagacaa atgagttccg
    17461 cactcagccg cctgatcagc aaaggcggcg caccgctcat ccgccaaggc gtaaattacg
    17521 ccatgcggct tctgggcaaa cagttcgtaa ccggacagac cattgaagaa gccctgcaaa
    17581 acggcaaaga acgcgaaaaa atgggctacc gcttctcctt cgatatgttg ggcgaagccg
    17641 cctacaccca agccgatgcc gaccgctact accgcgacta tgtcgaagcc atccacgcca
    17701 tcggcaaaga tgcggcagga caaggcgttt acgaaggcaa cggcatttcc gtcaaacttt
    17761 ccgccatcca tccgcgctac tcgcgcgccc aacacggccg tgtgatgggc gaactgttgc
    17821 cgcgcctgaa agagctgttc cttttgggta aaaaatacga tatcggtatc aacatcgatg
    17881 ccgaagaagc caaccgtctg gagctgtctt tggatttgat ggaggctttg gtttcagacc
    17941 ctgacttggc tggctacaaa ggtatcggtt tcgttgtcca agcctaccaa aaacgttgtc
    18001 cgttcgttat cgactacctg attgacctag cccgccgcaa caaccaaaaa ctgatgatcc
    18061 gcctcgtcaa aggcgcgtat tgggacagcg aaatcaaatg ggcgcaagtg gacggcttga
    18121 acggctatcc gacctacacc cgcaaagtcc acaccgacat ctcctacctc gcctgcgcgc
    18181 gcaaactgct ttccgcgcaa gacgcggtat tcccgcaatt tgccacgcac aacgcctaca
    18241 ctttgggcgc gatttaccaa atgggcaaag gcaaagactt tgaacaccaa tgcctgcacg
    18301 gcatgggcga aaccctgtac gatcaagtcg tcggcccgca aaacttaggc cgccgcgtgc
    18361 gcgtgtacgc cccggtcggc acacacgaaa ccctgctcgc ctacttggtg cgccgcctgt
    18421 tggaaaacgg cgcgaactcg tctttcgtga atcaaatcgt tgatgaaaac atcagcatcg
    18481 accgcctgat taagagcccg ttcgacacca tcgccgaaca aggcatccac ctgcacaacg
    18541 ccctgccgct gccgcgcgat ttgtacggca aatgccgtct gaactcgcaa ggcgtggact
    18601 tgagcaacga aaacgtattg cagcagcttc aagaacagat gaacaaagcc gccgcgcaag
    18661 acttccatgc cgcatccatc gtcaacggca aagcccgcga tgtcggcgaa gcgcaaccga
    18721 ttaaaaaccc tgccgaccac gacgacatcg tcggcacagt cagctttgcc gatgccgcgc
    18781 ttgcccaaga agcggttggt gcagccgttg ccgcgttccc cgaatggagt gcgacacctg
    18841 ccgccgaacg cgccgcctgc ctgcgccgtt tcgccgacct gctcgaacag cacaccccag
    18901 cactgatgat gcttgccgtg cgcgaagcag gcaaaacgct gaacaacgcc attgccgaag
    18961 tgcgcgaagc cgtcgatttc tgccgctact acgcaaacga agccgaacat accctgcctc
    19021 aagacgcaaa agccgtcggc gcgattgtcg ccatcagccc gtggaacttc ccgctcgcca
    19081 tctttaccgg cgaagtcgtt tccgcattgg cggcaggcaa caccgtcatc gccaaacccg
    19141 ccgaacaaac cagcctgatt gccggttatg ccgtttccct catgcacgaa gccggcatcc
    19201 cgacttccgc cctgcaactc gtcctcggcg caggcgacgt gggtgcggca ttgaccaacg
    19261 atgcccgcat cggcggcgtg atttttaccg gctcgaccga agtggcgcgc ctgatcaaca
    19321 aagcccttgc caaacgcggc gacaatcccg tcctgattgc cgaaaccggc ggacaaaacg
    19381 ccatgattgt cgattccacc gcacttgccg agcaagtctg cgccgacgta ttgaactccg
    19441 ccttcgacag cgcgggacaa cgctgctccg ccctgcgcat tttgtgcgtc caagaagacg
    19501 ttgccgaccg tatgctcgac atgatcaaag gcgcgatgga cgaactcgtc gtcggcaaac
    19561 cgattcagct cactaccgat gtcggccccg tcatcgatgc cgaagcacag caaaacctgt
    19621 tgaaccacat caacaaaatg aaaggtgttg ccaagtccta ccacgaagtc aaaaccgccg
    19681 ccgatgtcga ttccaaaaaa tccacgttcg ttcgccccat cctgtttgaa ttgaacaacc
    19741 tcaacgaact gcaacgcgaa gtcttcggtc ccgtcctgca cgtcgtccgc taccgcgccg
    19801 acgaactcga caacgtcatc gaccaaatca acagcaaagg ctacgccctg acccacggcg
    19861 tacacagccg catcgaaggc acggtacgcc acatccgcag ccgcatcgaa gccggcaacg
    19921 tttacgtcaa ccgcaacatc gtcggcgcag tcgtcggcgt acagcccttc ggcggacacg
    19981 gtctgtccgg cacaggcccc aaagcaggcg gttcgttcta cctgcaaaaa ctgacccgcg
    20041 ccggcgaatg ggttgccccg accctgagcc aaatcggaca ggcggacgaa gccgcactca
    20101 aacgcctcga agcactggtt cacaaactac cgttcaacgc cgaagagaaa aaagccgcag
    20161 cggccgcttt gggacacgcc cgcatccgca ccctgcgccg tgccgaaacc gtccttaccg
    20221 gaccgaccgg cgagcgcaac agcatctcat ggcacgcgcc caaacgcgtt tggatacacg
    20281 gcggcagcac ggttcaagcc tttgccgcac tgaccgaact tgccgcctcc ggcatacagg
    20341 cagtggtcga acccgacagc cccttggctt cctacaccgc cgacttggaa ggtctgctgc
    20401 tggtcaacgg caaacccgaa accgccggca tcagccacgt tgccgccctg tcgcctttgg
    20461 acagcgcacg caaacaggaa cttgccgccc acgacggcgc actcatccgc atcctccctt
    20521 cggaaaacgg actcgacatc ctgcaagtgt ttgaagaaat ctcttgcagc gtcaacacca
    20581 cagccgccgg cggcaacgcc agcctgatgg cggtcgccga ctgattttac cgaaatcccc
    20641 gggcgcgggc cgtgaaccaa tgccgtctga aaacctttca gacggca
//
LOCUS       DAWITQ010000019        20032 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.019, whole genome shotgun sequence.
ACCESSION   DAWITQ010000019 DAWITQ010000000
VERSION     DAWITQ010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20032)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20032)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20032
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.019"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(199..274)
                     /locus_tag="WIX18_000593"
     tRNA            complement(199..274)
                     /locus_tag="WIX18_000593"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(239..241),aa:Asn,seq:gtt)
     gene            complement(367..726)
                     /locus_tag="WIX18_000594"
     CDS             complement(367..726)
                     /locus_tag="WIX18_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HEZ5237739.1"
                     /translation="MQQLLISILEDLNNTSTDIIASAVISTDGLPMATMLPSHLNSDR
                     VGAISATLLALGSRSVQELACGELEQVMIKGKSGYILLSQAGKDAVLVLVAKETGRLG
                     LILLDAKRAARHIAEAI"
     gene            complement(749..1393)
                     /locus_tag="WIX18_000595"
     CDS             complement(749..1393)
                     /locus_tag="WIX18_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M23"
                     /protein_id="HEZ5237740.1"
                     /translation="MESTLSLQANLYPRLTPAGAFYAVSSDAPSAGKTLLHSLLKADV
                     DEMVSSEKLLTWADTADIDTALNLLYRLQKLEFLYGDENGHSDGINLSDEQLPLLMEQ
                     LSGSGKALLVDRNGLYLANANFHHEAAEELGLLAAEVAQMEKKYRLLIKNNLYINNNA
                     WGVCDPSGQSELTFFPLYIGSTKFILVIGGIPDLGKEAFVTLVRILYRRYSNRV"
     gene            complement(1395..1931)
                     /locus_tag="WIX18_000596"
     CDS             complement(1395..1931)
                     /locus_tag="WIX18_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP/GTP-binding protein"
                     /protein_id="HEZ5237741.1"
                     /translation="MRENKIIFTGPVGVGKTTAIAAISDEALVQTDASASDMTLDRKR
                     NTTVAMDYGAISLDEDTKVHLYGTPGQERFNFMWEILSQGSMGLVLLLDNARTNPLKD
                     LEFFLHSFRGLLEKAPVVVGITKMDIRSQPGIDVYHKYLAKHNLNVPVFEIDARKEDD
                     VKQLVSAMLFSIDPGLEV"
     gene            complement(1943..3040)
                     /locus_tag="WIX18_000597"
     CDS             complement(1943..3040)
                     /locus_tag="WIX18_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEZ5237742.1"
                     /translation="MEVQLPKIKTVRVMLAGMTAQQESVFKMAFKMHNTTRYETVSPS
                     DGSAVPDLVLADTDAEGGFELWKELAERYKDIPVAVCSEKVPDSEVPYLPKPIRFETL
                     FPMLRKLLQGENVYGKSFIAPADRSAKNNGNVQRTVTIRQFNPNKGLLGALRFAEKNR
                     QDIAILHGNKPVLIVFPSIQRVLLTESVQKLEELCKDENLQVSCKTVPDNPQWREKAK
                     VGIMSCMWQFSIWTAQGRLIYPISPDTPFTLKSWPNLTRLANVPGSIRLSAFLTKASV
                     NLNVLYKVMPLNLNDILNYLAATYTTGFLSVDLKTVSQQAYSDMADKINIGADSASDS
                     EMMKKAEKITTPSQSQSRGLLQRLMKKLLGS"
     gene            complement(3043..4479)
                     /locus_tag="WIX18_000598"
     CDS             complement(3043..4479)
                     /locus_tag="WIX18_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEZ5237743.1"
                     /translation="MENSLIIGLALAVLLMLLVMRAKQGKKTPKRKSQGVGNTQGQTP
                     GSNDSDWVDQIGQSVSDGTQPDWSWNESAETASAAVSAQEVDPLTEYQVYKQFGYQGK
                     AAESLAAYLDGIPDGEAKPENLIRELLDINLEVGDVDVLADNLQKYGKLIPSELLAKY
                     IEQALQRDSNHLRIRVLAEEGLGWGTQEIEKRAEGGSATAASASPPPDAGGKAYEAEE
                     IKRIPIVRGKKDVSGISQEEIGAIAGLVRADQGAKILKDKVSYETASKQYDRAIQTSE
                     KPANLIIDALKLDYQHADIDRFAGHLWKLYQTLGNYGRQVKERMLGWGYSLGYHEVFD
                     DLEKGPNDRQIKDIGMGHGYLPKNIQKFKSQHRDLVLQDSSLINTGSSPADDAVKEVE
                     SLLMYGQIEAAMDVLEQAVLKYPDESQLYITLIDIYERTEDWDRLGQFLRVLRERADR
                     LPEEVVMLMSRLLQRMNQNIKKIKRYGK"
     gene            complement(4699..5481)
                     /gene="bioC"
                     /locus_tag="WIX18_000599"
     CDS             complement(4699..5481)
                     /gene="bioC"
                     /locus_tag="WIX18_000599"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HEZ5237744.1"
                     /translation="MESLTAINKSRIRQAFQKALNDYDRHALIQQKMTINLMAHLQDY
                     LPDMPLENVLELGCGSGMLSALLQKQISANYWLFNDLCDVQPQLAEKLPQSFDFYCGD
                     AENFPFQRQFDLIASASAVQWFHQPDAFITHCKTGLKANGLLAVATFGKDNLKEVRQI
                     TNIGLNYPTLSQWQTWLAKDFELLWCEDFKVILDFDTPLDVLKHLKYTGVTATNQKNW
                     TRKNLNGFIGDYLSAFSMPSGKVRLTYHPLFFIARYSAEGRQ"
     gene            complement(5469..6116)
                     /locus_tag="WIX18_000600"
     CDS             complement(5469..6116)
                     /locus_tag="WIX18_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HEZ5237745.1"
                     /translation="MKTKFYNHQGGHLILYFAGWGTPPDAVNHLILPENHDLLICYDY
                     QDVNLDFDFSAYRHIRLVAWSMGVWAAERALQGIRLKSATAVNGTGLPCDDNFGIPFA
                     VFKGTLENLTEDTRLKFERRICGDKASFEDYQQFPARPFDEIHQELTSLFKMIGQDRC
                     TDLIRWTNALVGSGDKIFMPANQHRYWTPRCTVREIDGGHYLFSRFTHWSALWNH"
     gene            complement(6126..7268)
                     /gene="bioF"
                     /locus_tag="WIX18_000601"
     CDS             complement(6126..7268)
                     /gene="bioF"
                     /locus_tag="WIX18_000601"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HEZ5237746.1"
                     /translation="MKVFKQQLEQLGAQNQYRSIPDLIHQGRYITRENRKMLNMSSND
                     YLGLASDENLRRSFLQQYGGNFPSFTSSSSRLLTGNFPIYTDLEELVAQRFQRESALL
                     FNSGYHANLGILPALTTTKSLILADKFVHASMIDGIRLSRCAFFRYRHNDYEHLKNLL
                     EKNVGKFDRTFIVTESVFSMDGDVADLKQLVQLKKQFPNTYLYVDEAHAIGVYGQNGL
                     GIAERDNLIAEIDLLVGTFGKALASVGAYAVCNQVLKECLINQMRPLIFSTALPPFNV
                     AWTYFIFERLPQFSKERSHLEQLSAFLRREVAHRTQIMPSQTCIVPYILGGNEAALAK
                     AEYLQRQGYYCLPIRPPTVPKNTSRIRLSLTADMTTDEVRQFAACL"
     gene            complement(7290..7427)
                     /locus_tag="WIX18_000602"
     CDS             complement(7290..7427)
                     /locus_tag="WIX18_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009346942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA methyltransferase"
                     /protein_id="HEZ5237747.1"
                     /translation="MATETNVAEISALDYEGRGVAKVGGKTVFIKRALLDCLMLGWFR
                     L"
     gene            7491..8567
                     /locus_tag="WIX18_000603"
     CDS             7491..8567
                     /locus_tag="WIX18_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEZ5237748.1"
                     /translation="MICRKPIGHKPYFDMNKTICRTAALLISGFSYANTVIPDVSPVA
                     QGQHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKS
                     IQKERGDGVKTIAAGPDNPLGPVFVRLGDPKLGLGIHGTNAPASVPGVRSHGCVRMKS
                     PDALEFAKTIASGSPASVIYQMAGLNEDADRNLWLAAFRDPYGKNNLDIASLKKSIAQ
                     WAKTQGKTIAPEKVDAVLKDRTGSAVCLTCGKNGKMKMPLKSLAWIQGSSSYSQAEVI
                     EQTEETNSAEISETRTPEVPDVHTPEAQPHLNTQSDGTPTAYTEPAADSSPQVETPDQ
                     AASEPVDVLFSIDVIRQGNLRLGN"
     gene            complement(8774..10240)
                     /locus_tag="WIX18_000604"
     CDS             complement(8774..10240)
                     /locus_tag="WIX18_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HEZ5237749.1"
                     /translation="MMKLGFKPIPLAIAAVLCALVLALPVPDGVKPQAWTLLAMFIGV
                     IAAIIGKAMPLGALSIIAVGLVAVTGVTADKPGAAMSDALSAFANPLIWLIAIAVMIS
                     RGLLKTGLGMRIGYLFIAVFGRKTLGIGYSLALSELLLAPVTPSNTARGGGIIHPIMQ
                     SIAGSYGSNPAKGTEGKMGKYLALVNYHSNPISSAMFITATAPNPLIVNLIAENLGSS
                     FRLSWGAWAWAMAVPGVIAFFVMPLILYFLYPPEIKETPNAVQFAKDRLREMGKMSAD
                     EIIMAVIFGILLLLWADVPALITGNHAFSINATATAFIGLSLLLLSGVLTWDDVLKEK
                     SAWDTIIWFGALIMMAAFLNKLGLIKWFSGVLAESVGGLGVSGTAAGVILVLAYMYAH
                     YMFASTTAHITAMFGAFFAAAVSLNAPAMPTALMMAAASNIMMTLTHYATGTSPVIFG
                     SGYTTMGEWWKAGFIMSVVNFLIFFVIGSIWWKVLGYW"
     gene            complement(10438..11361)
                     /gene="speB"
                     /locus_tag="WIX18_000605"
     CDS             complement(10438..11361)
                     /gene="speB"
                     /locus_tag="WIX18_000605"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HEZ5237750.1"
                     /translation="MQYSTLAGQTDNSLVSNNFGFLRLPLNFMPYESHADWVITGVPY
                     DMAVSGRSGARFGPEAIRRASVNLAWEHRRFPWTFDVRERLNIIDCGDLVFSFGDSRD
                     FVEKMEAHAGKLLSSGKRCLSLGGDHFITLPLLRAHARYFGKLALIHFDAHTDTYDNG
                     SEYDHGTMFYTAPKEGLIDPSRSVQIGIRTEHSKKLPFTVLTAPQVNEDSVEETVRKI
                     KETVGNMPVYLTFDIDCLDPSFAPGTGTPVCGGLSSDRALKILRGLTDLDIVGMDVVE
                     VAPSYDQSDITALAGATIALEMLYLQGAKKD"
     gene            complement(11460..13352)
                     /gene="speA"
                     /locus_tag="WIX18_000606"
     CDS             complement(11460..13352)
                     /gene="speA"
                     /locus_tag="WIX18_000606"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HEZ5237751.1"
                     /translation="MPILTIREVCNINHWGIGYYDVDDSGEIIVRPNPSQHNQTVSLQ
                     KLTEAVQQKHQARLPVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQ
                     HRRVIESLMSSGQPHGLEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEK
                     LGHQVYLVIEKLSEIQMVLEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLS
                     ASQVLQLVDILKQKNRLDCLQLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNI
                     RCFDVGGGLGVDYEGNRTQSDCSVNYSLNEYAATVVWGISQACLEHGLPHPTIITESG
                     RGITAHHAVLVANVIGVERYKPRRLDAPSPEAPRVLHSMWETWTDISASREKRSLRSW
                     IHEGQFDLADVHNQYNVGLLSLAQRAWAEQLYLNICHEVGELFNEKHRSHRTIIDELQ
                     ERFADKLYVNFSLFQSLPDAWGIDQLFPVCPITGLNEPIARRAVLLDITCDSDGTIDH
                     YIDGDGIAGTMPMPDYPEEEPPLLGFFMVGAYQEILGNMHNLFGDTATADVVVGEDGQ
                     FTVIDYDEGNTVADMLEYVYQDPKELMKRYREQIEHSDLPASQAMSFLKELEAGLNGY
                     TYLEDE"
     gene            complement(13519..13803)
                     /locus_tag="WIX18_000607"
     CDS             complement(13519..13803)
                     /locus_tag="WIX18_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEZ5237752.1"
                     /translation="MKKLLLVAVVSLSAAAAFAGDSAERQIYGDPHFEQNRTKAVKML
                     EQRGYQVHDVDADDHWGKPVLEVEAYKDGREYDIVLSYPDLKIIKEQLDR"
     gene            complement(13954..15762)
                     /gene="aspS"
                     /locus_tag="WIX18_000608"
     CDS             complement(13954..15762)
                     /gene="aspS"
                     /locus_tag="WIX18_000608"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEZ5237753.1"
                     /translation="MRTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGI
                     VQVVIDPDTPEAFAAADSSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVL
                     NAAATPPFQIDDENISENVRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFID
                     IETPMLTRSTPEGARDYLVPSRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFR
                     DEDLRADRQPEFTQIDLETSFLNEDEIMDITEGMAKQVFKDALGVDLGDFPRMPYSEA
                     MFYYGSDKPDMRINLKFTELTDLMKTEEFKVFRGAADMKGGRVVALRVPNGTKFSRKE
                     IDEYTKFVGIYGAKGLAYIKVNDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQ
                     NGDIIFFGADKTKVVNEAIGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEA
                     DRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHCADVQEKV
                     FAALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFPKT
                     QRAQCLLTNAPNSVDDKQLRELSLRLRQKAAETKEA"
     gene            complement(15820..16521)
                     /locus_tag="WIX18_000609"
     CDS             complement(15820..16521)
                     /locus_tag="WIX18_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HEZ5237754.1"
                     /translation="MTEPAAEGGKAAKALKKYLITGILVWLPIAVTVWVVSYIVSASD
                     QLVNLLPKQWRPQYVLGFNIPGLGVIVAIAVLFVTGLFAANVLGRQILAAWDSLLGRI
                     PVVKSIYSSVKKVSESLLSDSSRSFKTPVLVPFPQSGIWTIAFVSGQVSNAVKAALPK
                     DGDYLSVYVPTTPNPTGGYYIMVKKSDVRELDMSVDEALKYVISLGMVIPDDLPVKTL
                     AGPMPSEKADLPEQQ"
     gene            complement(16664..17812)
                     /locus_tag="WIX18_000610"
     CDS             complement(16664..17812)
                     /locus_tag="WIX18_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HEZ5237755.1"
                     /translation="MPTMGAEMNTRNMRYILLTGLLPMASAFGETALQCAALTDNVTR
                     LACYDRIFAAQLPSSAGQEGQESKAVLNLTETVRSSLDKGEAVIVVEKGGDALPADSA
                     GETADIYTPLSLMYDLDKNDLRGLLGVREHNPMYLMPLWYNNSPNYAPSSPTRGTTVQ
                     EKFGQQKRAETKLQVSFKSKIAEDLFKTRADLWFGYTQRSDWQIYNQGRKSAPFRNTD
                     YKPEIFLTQPVKADLPFGGRLRMLGAGFVHQSNGQSRPESRSWNRIYAMAGMEWGKLT
                     VIPRVWVRAFDQSGDKNDNPDIADYMGYGDVKLQYRLNDRQNVYSVLRYNPKTGYGAI
                     EAAYTFPIKGKLKGVVRGFHGYGESLIDYNHKQNGIGIGLMFNDLDGI"
     gene            complement(17973..18236)
                     /gene="rpsT"
                     /locus_tag="WIX18_000611"
     CDS             complement(17973..18236)
                     /gene="rpsT"
                     /locus_tag="WIX18_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEZ5237756.1"
                     /translation="MANSAQARKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDK
                     AAAQAVYQESVKVIDRIADKGVFHKNKAARHKSRLSAKVKALA"
     gene            18539..19681
                     /locus_tag="WIX18_000612"
     CDS             18539..19681
                     /locus_tag="WIX18_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ5237757.1"
                     /translation="MKKSVLAVLAALSLAACGGSEKNAVQPQADAASAANAEAAATDT
                     LNIYNWSNYVDESTVEDFKKANNLKLTYDLYENNETLEAKMLTGKSGYDLVVPGIAFL
                     PRQIEAGAYQKVNKDLIPNYKNIDPELLKMLETADPGNQYAVPYFSGVNTIAITAKGK
                     ELLGGKLPENGWDLLFKPEYTHKLKSCGIALWDTPSEMFPILLNYLGKDPKGSNPEDL
                     KAAAEVLKSIRPDVKRFSPSIIDELARGDICLAAGNGGDLNLAKARSEEVKNNVGIEV
                     LNPKGMGFWIESWLIPADAKNVANAHKYINYTLDPEIAAKNGIAVTFAPASKPAREKM
                     PAELVNTRSIFPNEQDMKDGFVMPQMSTDAKKLSVSLWQKIKVGTN"
BASE COUNT         5157 a         5179 c         4653 g         5043 t
ORIGIN      
        1 gccgtactgg tttttgttaa tccactataa aatcgagttt atcctagctg tccaggacag
       61 cccctatttt ttcataacca tcacgaaagg aattttgcaa agattttatt ccatctcaaa
      121 acaatcatct caaaaatgcg tttctgaccg ccggtaaaac aaaaccctct aagaaaatac
      181 ttagagggtt ttgaaatttg gctccccgac ctgggctcga accagggacc tgcggattaa
      241 cagtccgtcg ctctaccgac tgagctatcg gggaataagc gcgaataata aaacagaaat
      301 accgaacgtg tcaatataaa ttgacaatcg attgcacttt atctgcaagc ccgcaatctt
      361 tatatgttat atggcttccg caatatgcct tgccgcacgt ttggcatcca ataggattaa
      421 accaagtctg ccggtttctt ttgccaccag caccaacacg gcatctttac ccgcctgact
      481 taaaaggata tagcctgatt ttcctttaat catcacttgt tccaattccc cgcaggcgag
      541 ttcctgcacc gagcgactcc ccaaagcaag caaagtggca gaaatcgccc ctaccctgtc
      601 cgaattcaaa tgtgaaggaa gcattgtcgc catcggcaat ccgtcggttg agataacggc
      661 agacgcgata atatccgtag atgtattgtt taaatcttca aggattgaaa tcaataattg
      721 ctgcataacc cctcctctct cccaagtttt acacgcggtt gctgtaacgg cggtataaaa
      781 tccttaccaa agtaacaaat gcctctttgc ccaaatcggg aatgccgccg ataaccaaaa
      841 taaatttggt tgaaccgata tacaatggga aaaatgtcaa ttcgctctga ccggaaggat
      901 cgcaaacgcc ccaagcgtta ttgttgatat acaggttgtt cttaatcagc agccggtatt
      961 tcttttccat ctgtgcgact tctgccgcca acaaccccaa ctcttccgcc gcctcatgat
     1021 ggaaattggc gttggcaaga tacagaccgt tccgatcgac caataacgcc ttaccgctgc
     1081 cggacaattg ttccatcagc aacggcaatt gctcgtccga caaattgatg ccgtctgaat
     1141 gaccgttttc atcgccatag aggaattcga gtttttgcaa acggtacaac aggttcaaag
     1201 cggtatcgat gtcggcggtg tccgcccagg taagcagctt ctcactgctg accatttcgt
     1261 ccacatccgc tttcaacagg ctgtgcaaca aagttttacc ggcactgggg gcatcgctgg
     1321 atacggcata aaatgcaccg gcaggagtca ggcggggata taaatttgct tgtagtgaaa
     1381 gtgttgattc catattaaac ctccagtccc ggatcaatag aaaataacat tgcgctaacc
     1441 aattgtttta cgtcatcttc cttacgggca tcaatttcaa aaaccggaac attaagatta
     1501 tgttttgcaa gatatttgtg atacacgtcg ataccgggct gagagcgtat atccatcttg
     1561 gtaataccga caacgacggg tgccttctcc agcagccctc gaaacgaatg taaaaagaat
     1621 tccaaatctt tcaacggatt ggttcgggca ttatctaaaa gcaagaccaa acccatactg
     1681 ccttggctta agatttccca cataaagttg aaccgttcct gaccgggcgt accatataaa
     1741 tggactttgg tatcctcatc caagctgatg gccccgtagt ccatcgccac tgtcgtattc
     1801 cttttcctat ccaaagtcat atcggatgcg gaagcatcgg tctgaacgag tgcttcgtcc
     1861 gaaatagccg caatggcagt ggttttccct acgccgacag gtcctgtgaa aataatttta
     1921 ttttctctca tctctccgcc tcttagctgc ccaacagttt tttcatcagc ctttgcagaa
     1981 gaccgcgcga ctgggattgg gatggtgttg tgattttttc cgcttttttc atcatttcac
     2041 tatcagaggc agaatcggct ccgatattta ttttatccgc catatcggag tatgcctgtt
     2101 gtgaaaccgt ttttaaatct accgacaaaa acccggttgt ataggttgcc gcaagataat
     2161 tcagaatatc attgaggttt aaaggcatca ctttatacaa cacgttaagg ttgacggatg
     2221 ccttggtcag aaatgccgac aagcgtatcg accccggcac atttgccaac cgggtcaggt
     2281 ttggccaaga tttcaacgta aacggagtat cgggagaaat cggataaatc aacctgccct
     2341 gcgccgtcca aatggaaaac tgccacatac aggacataat gcctacttta gccttttcgc
     2401 gccattgcgg gttatcggga acagtcttgc agctgacctg caaattttcg tctttgcaca
     2461 attcttcgag tttttgcaca ctttctgtca gcaaaacccg ttgtatcgag gggaaaacaa
     2521 taaggaccgg cttatttcca tgcaagatag cgatgtcctg cctgttcttt tccgcaaacc
     2581 gcaacgcccc caataatcct ttattcgggt taaactggcg tatcgtaacc gtacgctgca
     2641 cattcccgtt atttttcgcc gaccggtctg cgggtgcaat aaacgatttc ccataaacat
     2701 tctcgccctg caacaatttg cggagcatag gaaacaatgt ttcaaaccga atcggtttgg
     2761 gcaggtaggg aacttcagaa tcgggaactt tctccgaaca gacggcgacg ggtatatcct
     2821 tataacgctc ggcaagctct ttccaaagtt caaaaccgcc ctcggcatcg gtatccgcca
     2881 aaaccaaatc gggcacggca ctgccgtctg aaggggatac tgtttcataa cgggtggtat
     2941 tgtgcatttt gaatgccatt ttgaaaacgg attcctgctg cgccgtcatc cccgccaaca
     3001 ttacgcgtac tgttttaatt ttcggcagtt gaacttccat ttttattttc cgtaccgttt
     3061 tattttttta atattttgat tcatacgctg cagcagccgg ctcatcagca taacgacctc
     3121 ttcaggaagc ctgtccgcac gttccctcaa tacccttaaa aactgcccca acctatccca
     3181 atcttcagta cgttcataaa tatcgatcaa cgtaatataa agctgggact cgtcgggata
     3241 tttcaatacc gcctgctcca acacatccat tgccgcttca atctgaccat acatcagcaa
     3301 cgactctact tccttaaccg catcgtctgc cggagacgaa ccggtgttga tcaacgaaga
     3361 atcttgaagc accaaatccc gatgttgcga tttgaatttc tgtatatttt tcggcagata
     3421 cccgtgcccc ataccgatgt ctttgatttg ccggtcgttc ggcccttttt ccaaatcatc
     3481 gaaaacttca tggtaaccca agctgtaccc ccaccccagc atccgctctt taacctgcct
     3541 gccgtagtta cccaacgttt ggtaaagttt ccacaaatgt ccggcaaaac ggtctatgtc
     3601 cgcgtgttgg taatcgagtt tcaacgcatc gataatcagg tttgcaggtt tttcggaagt
     3661 ttggatggca cggtcgtatt gtttcgatgc cgtttcatag ctgactttgt ctttaaggat
     3721 tttcgcacct tgatcggcgc gaaccaaacc ggcaatcgca ccgatttcct cttgactgat
     3781 tccggacacg tcttttttgc cccgcacaat cgggatgcgc ttgatttctt cggcttcata
     3841 agccttaccg ccggcatccg gcgggggcga tgcggaagct gccgtcgcag aaccgccttc
     3901 cgcacgtttt tcaatctcct gagtgcccca tcccaaacct tcttccgcca agacacggat
     3961 acgcaaatgg tttgaatcgc gctgtaatgc ctgttcgata tattttgcca aaagttcgga
     4021 aggaatcagt ttgccgtatt tttgcagatt gtctgccaaa acatcgacat cccccacttc
     4081 gagattgata tcgagcagct cgcggataag gttttcaggt ttcgcttcac catccggaat
     4141 gccgtccaga taggcagcca aagattcggc agccttgccc tgataaccga attgcttata
     4201 aacctgatac tccgtaagcg gatcgacttc ttgcgcggat acggcggcgg atgcggtctc
     4261 ggcactttcg ttccaagacc agtcgggttg cgtgccgtct gaaaccgatt gtccaatctg
     4321 atcgacccag tccgaatcat tgcttccggg tgtctgcccc tgcgtattgc cgacaccttg
     4381 ggatttgcgc ttcggtgttt tcttaccctg cttcgcacgc ataaccaaaa gcatcagcaa
     4441 taccgccagt gccaaaccga taattaatga gttttccaaa ggatactccc gataccgtaa
     4501 cgagcggata gctgaccgcc tgcaacggcc attgtccgct tttattatta acgatttact
     4561 gaaatagact tgtaagtttt aaatcatacc ataatttaac gtttaacaat atgccttctg
     4621 cacaagcctc gccatattac cttttaccca catcagtatc aatacccgat ataaaaataa
     4681 ctttgcccat aagctgcctt attgcctgcc ctccgcagag tagcgcgcga taaaaaataa
     4741 cggatgataa gtcaggcgca ctttgcccga cggcatactg aacgccgaca agtaatcgcc
     4801 aataaatcca ttgagatttt ttcttgtcca atttttttgg ttcgtggcgg taacgcctgt
     4861 atatttaagg tgtttgagta catctaacgg cgtatcaaag tctagtatta ccttaaaatc
     4921 ctcacaccat aaaagctcaa aatctttggc taaccaagtc tgccattggg ataaagtcgg
     4981 gtaatttaag cctatatttg taatttggcg gacttctttt aaattgtctt tgccaaaggt
     5041 tgcaaccgcc aataatccgt ttgctttcaa gcctgttttg caatgggtga taaaagcgtc
     5101 gggttgatga aaccattgca cggcagatgc gcttgcgatt aagtcaaatt gtcgttgaaa
     5161 aggaaagttt tccgcatcgc cgcaataaaa atcaaaggat tgcggcagtt tttcagccag
     5221 ttggggctgc acatcgcaca aatcattaaa taaccaataa ttcgctgaaa tctgtttttg
     5281 cagcaaggca ctcaacattc ctgagccaca gcccaattcc aacacgtttt ccaatggcat
     5341 atccggcaaa taatcttgca aatgcgccat taaattaatc gtcatttttt gttggattaa
     5401 ggcgtgccgg tcataatcgt ttaatgcttt ttggaaagcc tgccgaatgc gcgatttatt
     5461 tatggcagtc agtgattcca tagtgccgac caatgggtga atcttgaaaa caggtaatgt
     5521 ccgccgtcaa tttcccgaac ggtgcaacgc ggtgtccaat atcggtgctg attggcaggc
     5581 ataaaaattt tatcgcccga tccgaccaag gcatttgtcc agcggataag atctgtacac
     5641 ctatcttgcc cgatcatctt aaaaagtgag gtaagttctt gatgaatttc gtcaaacggg
     5701 cgggcgggaa attgttggta atcttcaaaa gatgctttat cgccacagat tctgcgttca
     5761 aattttaaac gggtatcttc cgtgaggttt tccaatgtgc ctttaaaaac ggcgaaaggg
     5821 ataccgaaat tatcatcgca aggcaaacct gtgccattca ctgccgttgc ggattttaat
     5881 cttattcctt gcaatgccct ctctgccgcc caaacgccca ttgaccacgc caccaaacgg
     5941 atgtgccgat aggcggaaaa atcaaaatcc aaatttacat cttgataatc atagcaaatc
     6001 aataaatcgt gattttccgg caaaatcaaa tgatttacag catcgggcgg cgttccccaa
     6061 cctgcaaaat acaggattaa atgtccgcct tgatgattgt aaaattttgt tttcatatca
     6121 tatccttaca ggcacgccgc aaactgccgc acttcatccg ttgtcatatc tgccgttaaa
     6181 gacaggcgga ttctggatgt gtttttgggt actgtcggcg gtctgatggg caggcaataa
     6241 taaccctgcc tttgcaggta ttccgctttg gcaagggcgg cttcattccc gcctaaaata
     6301 taggggacga tgcaggtttg gctcggcatt atttgcgtcc gatgcgccac ttcccgccgt
     6361 aaaaatgcac ttaactgctc aagatggctt ctttcttttg agaattgcgg caatcgttca
     6421 aaaataaaat aagtccaagc cacattaaac ggcggcaatg cggttgaaaa aatcaatggg
     6481 cgcatttgat taatcaaaca ttctttcaat acttggttgc agacggcata cgcccccacc
     6541 gaggctaagg ctttaccgaa agtgccgacc aataaatcaa tctcggcaat cagattatcc
     6601 cgttcggcaa tccccaatcc gttttgccca taaacaccga ttgcgtgggc ttcatccaca
     6661 taaagataag tattgggaaa ctgttttttt aattggacaa gctgtttcaa atccgccaca
     6721 tcgccgtcca tactgaaaac agattcggta acgataaaag tgcggtcaaa ttttccgacg
     6781 tttttttcaa gcagattttt caaatgttca taatcattat gacgataacg gaaaaacgca
     6841 caccggctca aacggatgcc gtcaatcata ctggcgtgaa caaatttatc tgccaaaatc
     6901 aaacttttcg tcgtcgtcaa agcaggcaaa ataccgagat tggcgtgata gccgctgttg
     6961 aacaataacg cgctttcccg ttggaaacgt tgtgcgacaa gctcttccaa atcggtataa
     7021 ataggaaagt tgcccgttaa taaacgcgat gaagaactgg taaaagaggg aaaattaccg
     7081 ccgtattgct gcaaaaaaga ccggcgcaag ttttcatctg atgccaaacc caaataatca
     7141 ttagacgaca tattcagcat tttgcggttt tcccgcgtaa tataccgccc ttgatgaatc
     7201 aaatccggaa tcgaacgata ttggttttgc gcgccgagtt gttcaagctg ttgtttaaaa
     7261 accttcatta tgatgtaaat attcctgagt taaagcctga accaacccag catcaaacaa
     7321 tcaagtaatg cccttttaat aaaaaccgtt ttgccgccga cctttgccac acccctgcct
     7381 tcataatcca aggcggaaat ttccgcgaca tttgtttccg ttgccattac ccaatccgtc
     7441 cgcactgtac cgaagcgcat attttcgcac aaattggtac ggtttcaggt atgatttgcc
     7501 gaaaacctat cggacacaaa ccatattttg atatgaataa aacaatctgc cgcactgctg
     7561 cactattgat aagcggtttt tcatacgcaa acaccgtcat tcccgatgtc tcccccgtcg
     7621 cacaaggtca acatgtcttc attaacatcc ctcagcaacg cctgttcctc tacaccgacg
     7681 gcaaactgac caaggtttat cccgttgcag taggtcgggc gatgacgcaa accaatctag
     7741 gcgaacataa aatcggtgcg aaagcctata accctgtttg gtacatcccc aaatccatac
     7801 agaaagaacg cggcgacggc gtaaaaacca tagccgccgg cccggacaac cctttggggc
     7861 cggtttttgt ccgcttaggc gaccctaaac tcggtttggg catacacggg accaatgcgc
     7921 cggccagcgt ccccggggtt cggagtcacg gctgcgtccg catgaaatcg cccgacgcgc
     7981 tcgagtttgc caaaaccatc gccagcggct cgcccgcctc cgtcatctat caaatggcgg
     8041 gtctcaatga agatgcggat cgcaacctgt ggcttgccgc cttccgcgac ccttacggta
     8101 agaacaacct tgacatcgcc tctctgaaaa aaagtattgc gcaatgggca aaaacacagg
     8161 gtaaaaccat cgcgcccgag aaagtcgatg ctgtactcaa agaccgcacc ggatcggccg
     8221 tctgcctgac ctgcggcaaa aacggcaaga tgaagatgcc gctcaaatcg ctggcgtgga
     8281 tacagggttc ttcctcatac agccaagctg aagtcattga acaaactgag gaaaccaact
     8341 ctgccgaaat atccgagaca cgcacgcccg aagtgcctga tgtacacacg cccgaggcac
     8401 aaccgcattt aaatacccaa tccgacggca cgccgactgc ctataccgaa ccggctgccg
     8461 attcatcgcc gcaagtagaa acacctgatc aggctgcttc cgagccggtt gatgtattat
     8521 tttcaataga tgtgatacgg cagggaaatt tgcgtttagg taattgaata accttctgat
     8581 tatttaatgc ttatgtttat cagaagttga taggcggttt ggtttttgtt tggcttttcc
     8641 tacaccgccg cctgccgctt tctgcaacat tcaagcgcac aaatatgcca tctgaaggct
     8701 ttagacggca tatttcacga taatagtcgc ccaatcaaat aaacacagat tggaaattta
     8761 ttttattttt cccttaccaa taccccagaa ctttccacca aatgctgccg ataacgaaaa
     8821 aaatcagaaa attgaccacg ctcatgataa aacccgcctt ccaccattct cccattgtgg
     8881 tgtagcccga accgaaaatc acaggcgaag taccggtcgc ataatgagtg agggtcatca
     8941 taatgttgga tgcggccgcc atcatcagcg cggtcggcat cgccggggca ttcagtgaaa
     9001 cggcagcagc gaaaaatgcg ccgaacatag cggtaatatg tgcagtagta ctggcaaaca
     9061 tataatgcgc atacatataa gcaagcacga ggattacgcc cgcagccgtg ccgctaacgc
     9121 ccaaaccgcc gacactttcc gccaacactc cggagaacca tttaatcagt ccgagtttat
     9181 ttaaaaatgc agccatcata atcaatgcgc caaaccaaat aatcgtatcc cacgcgcttt
     9241 tttctttcaa aacatcgtcc caagtcaata caccggaaag caaaagcagg cttaatccga
     9301 taaatgcggt ggcggtggcg ttgatactaa aagcgtgatt gccggtaata agggcgggaa
     9361 catctgccca caacagcaac aagataccga aaatgaccgc cataatgatt tcgtctgccg
     9421 acattttacc catctccctc agacggtctt tggcaaattg aacggcattg ggcgtttctt
     9481 taatttcagg cggatacaaa aaatataaaa tcaaaggcat aacgaaaaag gcgataacgc
     9541 cgggaacagc cattgcccac gcccacgccc cccaagaaag acggaaacta ctgcctaaat
     9601 tttcggcaat caagttgacg attaaagggt tgggggcagt tgcagtaata aacatagccg
     9661 acgaaatggg attggaatga tagttgacca aagccaaata tttacccatc ttgccttctg
     9721 tgccttttgc gggattggag ccgtaactgc cggcaatcga ctgcataatc ggatgtataa
     9781 tgccgccgcc gcgcgcggta ttggaagggg taacgggagc cagcagcagt tcggaaagag
     9841 cgagactgta accgatgccc agcgtttttc ttccaaaaac ggcgataaac aaatatccga
     9901 tacgcatccc cagccctgtt ttgagcaaac cgcgcgaaat cataactgcg atggcaatca
     9961 gccaaatcaa cggattggcg aacgcactca acgcatcgct catcgccgca cccggtttgt
    10021 cggcggttac gccggttact gcgaccaacc cgacggcaat aatcgacagc gcacccaacg
    10081 gcatggcctt gccgataatg gcggcaatca caccgataaa catggccagc agcgtccaag
    10141 cctgaggctt gaccccgtcg ggtacgggca gtgccaaaac caaggcgcac aatactgcgg
    10201 caatggcgag gggtatcggt ttgaaaccca atttcatcat attgacctcc gtaaaaaaga
    10261 ccgtcccgaa aaatcggaaa aataatattt aactaattgt tttataatat atattccgat
    10321 atttcaccgt ctttccgata tgcggctccg ggcaactttt gtttcagtat ttgaattttc
    10381 attagactga atacgccgtt tgaacggcac ggcgaaaacc cgggggatgc cggacgttca
    10441 gtcctttttc gcaccttgaa ggtaaagcat ttccaaggca attgtggcac cggccaaagc
    10501 ggtaatgtcg gattggtcgt aagagggggc aacttctaca acatccatac cgacgatgtc
    10561 gagatccgtc agcccacgta ggatttttaa tgccctgtcg ctgctcaagc cgccgcatac
    10621 gggcgtaccg gtcccagggg cgaacgacgg gtccaggcag tcgatgtcga aagtcaggta
    10681 aacgggcata ttgccgacgg tttctttgat tttacggacg gtctcttcaa cactgtcttc
    10741 attgacttgg ggggcggtca acacagtaaa aggcaatttt ttactgtgtt cggtacgtat
    10801 gccgatttgt acggaacggg acgggtcgat gaggccttcc ttgggggcgg tatagaacat
    10861 cgtaccgtgg tcgtattcgc tgccgttgtc gtaggtgtcg gtgtgcgcgt caaaatgaat
    10921 cagtgcgagt ttgccgaaat agcgggcgtg ggcgcgcaac aacggtaggg taatgaaatg
    10981 gtcgccgccc aaactcaaac agcgtttgcc ggaagaaagt aatttgccgg cgtgcgcttc
    11041 cattttttcg acaaaatccc tgctgtcgcc aaaagaaaaa accaagtcgc cgcaatcaat
    11101 aatgttcagg cgttcgcgca catcaaatgt ccatggaaat ctgcggtgct cccaagcgag
    11161 gttgacggag gcgcgccgga tggcttcagg accgaaacgc gcgccggaac gccctgaaac
    11221 cgccatatca taaggcacgc cggtaataac ccaatcggca tgactttcat acggcataaa
    11281 attaagcggc aggcgcaaaa acccgaaatt attggaaacg agggagttgt cggtttgtcc
    11341 tgccagtgtg ctgtattgca tcgtaatgat tccttgtaat tggtttcaat cggtcgtgat
    11401 gattggtgtt tgagtaagaa aatcgggctt cagacgacat atccgatgcc ttgatgcgtc
    11461 tattcgtctt ccaaataggt ataaccatta agccccgctt cgagttcttt taagaaagac
    11521 atagcctgcg aggcaggaag gtctgaatgt tcgatttgtt cgcgatagcg tttcatcagc
    11581 tctttcggat cttgataaac gtattcgagc atatcggcaa cggtgtttcc ttcatcgtaa
    11641 tcgatgacgg taaattgtcc gtcttcccct acaacaacat cggcagtggc agtgtcgccg
    11701 aaaagattgt gcatattgcc gagtatttcc tgatatgctc ccaccataaa aaagcctaaa
    11761 agcggcggct cttcttcggg ataatcaggc ataggcatcg taccggcgat gccgtcgccg
    11821 tcgatgtagt ggtcaatcgt accgtctgaa tcgcaggtaa tgtccaacaa cacggcgcgg
    11881 cgcgcaatcg gttcattcaa accggtaatg ggacaaacag ggaaaagttg atctatgccc
    11941 caagcatcgg gcaaagattg gaagagtgag aaattgacat acagcttatc ggcaaaacgt
    12001 tcttgcaatt cgtcaataat ggttcggtga gaccggtgtt tttcattaaa caattcgccg
    12061 acttcatgac agatatttaa atacagttgc tccgcccacg cacgttgcgc caaactcaac
    12121 agcccgacat tatactgatt atgcacatcg gcaagatcaa actgcccttc gtgtatccag
    12181 ctgcgtaagg aacgtttttc ccgcgaggcg gaaatatccg tccaagtttc ccacatactg
    12241 tgcaacacac gcggtgcttc gggcgatggc gcatccagcc ggcgcggttt gtaacgttca
    12301 acgcctataa cattagcaac caaaacggcg tgatgtgcgg taatgccgcg cccgctctcg
    12361 gtgatgattg tcggatgcgg cagcccgtgt tcgagacaag cctggctgat gccccatacg
    12421 actgtggcgg catattcgtt gaggctgtaa ttaacggaac aatccgattg tgtgcggttt
    12481 ccttcgtaat ccacgccaag cccgccgcct acatcaaaac agcggatatt tacccccagt
    12541 ttgtgcaact caacataaaa ccgagccgat tcgtgtacac ctgtggcaac atcacggatg
    12601 ttcccaagct gcgagcccaa atggaaatgc aaaagctgca ggcagtccag cctgtttttt
    12661 tgtttcaaaa tatcgaccag ttgcaaaact tgggaagccg acaagccgaa ttttgatttt
    12721 tccccacccg aagactgcca ttttcccgaa ccttgggaag ccagtctggc gcgcacaccc
    12781 aaacggggct tgatgccgag tttttccgcc tcttccaata ccatttgtat ttcggacagc
    12841 ttctcaatca ccaaataaac ctgatgcccc agtttttcgc ccatcaaggc gaaacggata
    12901 tattcacggt ctttatagcc gttgcagacg attaatgttt gccgggtgcc ggcgtgtgcc
    12961 aaaaccgcca tcagttcggc tttagaacca gcttccaaac catgcggttg tccgcttgac
    13021 ataagcgatt cgatgacgcg gcggtgttgg ttgaccttga tagggtaaac caaacaataa
    13081 ccgcccttat agccgcactc ttcccgtgcc gtctgaaagg cgcggttaat gtcgcggagg
    13141 cggtgttcga ggatttgcgg aaaacaaaac aaaacaggca ggcgcgcctg atgtttttgt
    13201 tgcacggctt cagtcagttt ttgcagtgaa acagtttgat tgtgttgcga gggattgggg
    13261 cggacgatga tttcgccgga atcgtcaaca tcataataac ctatgcccca atgattaatg
    13321 ttgcacactt cacggatggt aaggataggc ataataaacc tgctccgtct gtcgtgttga
    13381 aaaggaatga ttataacaaa tcagcgtgaa atgtcatttt tttaataaga aaagcctgcc
    13441 tcatacctga tgagaaacag gcaaaatgcc gtctgaacgc ttcagacggc attttggttc
    13501 agctttccat caaaggaatc agcgatcgag ctgctctttg atgattttca ggtcggggta
    13561 agacaacacg atgtcgtatt cgcggccgtc tttataggct tccacttcca aaacaggttt
    13621 gccccaatgg tcgtcggcat cgacatcgtg aacctgataa ccgcgctgtt ccaacatttt
    13681 cacggctttt gtgcggtttt gttcaaaatg gggatcgccg taaatctgac gctcggcaga
    13741 gtcgccggca aatgcggctg cggcactcag ggaaacaacg gcgaccaata acagtttttt
    13801 cattttcagt ccttttttta tcggttgatt gaacaagatg tgtttttcaa taccgccatt
    13861 aaaacacagc aaaattaggt ttgaattaga gggaagtcaa gaagcgtaaa tgccgtctga
    13921 aaaaaacaga gccgtcaaac ggctctgttt tccttatgct tctttggttt cagccgcctt
    13981 ttgacgcagg cgcaaactca attcgcgcaa ctgcttgtcg tccacgctgt tgggcgcgtt
    14041 ggtcagcagg cattgggcgc gttgtgtttt cgggaaggca atcacgtcgc ggatagattc
    14101 ggcgccggtc atcagggtaa ccaaacggtc gaggccgaat gcaaggccgc cgtgaggagg
    14161 cgcaccgaat ttcaggttgt ccaagaggaa gccgaatttc tcttgttgct cttcagggct
    14221 gattttcagc gcggcaaaca ctttctcttg tacgtctgca cagtggatac ggatagagcc
    14281 gccgccgatt tcccagccgt tcaataccat gtcgtaggca cgggccaggc agtttgcagg
    14341 gtcggaaacc atcaggtctt catgaccttc tttaggcgcg gtaaacggat ggtgtacggc
    14401 aacgtagcgg tcggcttctt cgtcgtattc gaacattggg aaatcgacaa cccacaaagg
    14461 tttccattcg tctgtgaagt agccgttatc tttgccgtgt tccaagccga ctttgatacg
    14521 caatgcgccg atggcttcgt tcacaacttt ggttttgtct gcaccgaaga agataatatc
    14581 gccgttttgt gcgccggtac gcgcgatgat ttccttcagg gcattctcag acaggaattt
    14641 tacgattgga gattgcaggc cgctgtcttc gccgttggag aggttgccca catcatttac
    14701 tttgatgtat gccagacctt tcgcaccgta gatgccgaca aatttagtgt attcgtcgat
    14761 ttctttgcgg ctgaatttcg taccgttcgg cacacgcagg gcaaccacgc ggccgccttt
    14821 catgtcggct gcgccacgga agactttgaa ttcttccgtt ttcatcaggt cggtcaactc
    14881 ggtgaatttc aagttgatac gcatgtccgg tttgtcagag ccgtagtaga acatggcttc
    14941 agagtaaggc atgcgtggga agtcgcccaa gtccacgccc agcgcgtctt tgaagacttg
    15001 tttcgccata ccttcggtga tgtccatgat ttcatcctcg tttaagaacg aggtttccaa
    15061 gtcgatttgc gtgaattcag gctgacggtc ggcacgcaag tcttcgtcgc ggaagcactt
    15121 ggtgatttgg tagtaacggt cgaaacccgc caccatcaac agttgtttga acaattgcgg
    15181 cgattgcggc agcgcgaaga actcgcccgg atgaacgcgg ctcggcacga ggtagtcgcg
    15241 cgcgccttcg ggcgtggagc gggtcagcat cggggtttca atgtcgatga aaccttgcgc
    15301 gtccaagtag cggcgaacgc ccatagcgac ttggtaacgc aggcgcaggt tgcgctgcat
    15361 caccggacgg cgcaggtcga taacgcggtt ggtcaggcga acgttttcgc tgatgttttc
    15421 gtcgtcgatt tggaacggag gcgtagcggc agcgttcaac acttcgattt ctttggcaag
    15481 gatttcgatt ttgccggaaa tcattttgtc gttggtcgtg ccttcgggac ggttgcgtac
    15541 gcggccggta atgctcaaaa cgtattcgtt gcgggaggaa tcggcagcgg caaacgcttc
    15601 gggcgtgtcg ggatcgatca cgacttggac gatgccttcg cggtcgcgca ggtcgataaa
    15661 aatcacaccg ccatggtcgc gtcgacggtg tacccagcct ttgacggtaa cggtttggtc
    15721 taagtattgc tcgctaatca gaccgcaata gttggtacgc ataaaatcac cttttattga
    15781 tttaaactga aaacagaaaa tgccgtctga acggcggctt tattgttgtt cgggcaaatc
    15841 cgccttttca gacggcatag gtcctgccaa tgttttgacg ggcaggtcgt cagggatgac
    15901 catacccagc gaaatcacat atttcaacgc ttcgtccacg ctcatatcga gttcgcgcac
    15961 atcgcttttc tttaccataa tatagtaacc gccggtcgga ttcggcgtgg tcggaacata
    16021 cacggaaaga taatcgccgt ccttcggcaa tgcggcctta accgcattcg acacctgacc
    16081 ggacacgaat gcgattgtcc aaatacccga ttggggaaac ggcacgagta ctggtgtttt
    16141 aaacgaacgg ctgctgtcgg acagcaacga ttcggatact tttttcacac tcgaatagat
    16201 ggacttcaca accggaatcc gccccaacaa gctgtcccac gcggcaagaa tctgccggcc
    16261 caatacgttt gcggcaaaca atccggttac aaacaatacg gcaatggcaa cgataacgcc
    16321 cagccccggg atattaaacc ccaaaacata ttgcggccgc cattgcttcg gcagcaggtt
    16381 gacgagctga tcggacgcgg aaacgatata ggaaaccacc caaaccgtta ccgcaatcgg
    16441 cagccaaacc aaaatgcccg taatcagata tttttttaac gccttggcag ctttaccgcc
    16501 ttcggccgca ggttccgtca tcttgcttga ttccgacaaa gtccgtacaa accgcacatt
    16561 atacgcgttt gcccggattc aaacgaaatt tttatcccgc cccgccaaac cgccggcggc
    16621 ttcagacgga acggcaactt gatataccgt ctgaacacgc ggttcagatg ccgtccaagt
    16681 cgttgaacat caacccgata ccgataccgt tctgcttgtg gttgtagtcg atcaggctct
    16741 cgccgtaacc gtggaatccg cgtaccacgc ctttgagttt gcccttaatc ggaaacgtgt
    16801 aggcggcttc aatcgcgccg tagcccgttt tggggttgta gcgcaatacg gaatacacat
    16861 tctgcctgtc gttcaggcgg tactgcagct tcacgtcgcc ataccccata tagtcggcaa
    16921 tatcgggatt gtcgttttta tcgccgctct gatcgaacgc acgcacccac acgcgcggaa
    16981 tcaccgtcaa tttgccccat tccatgcctg ccatggcgta aatcctgttc cacgaacgcg
    17041 attcgggacg gctctgtccg ttggactggt ggacaaaacc cgcaccgagc atacgcagcc
    17101 tgccgccgaa cggcaaatcc gccttcacag gctgggtcag gaaaatttca ggtttgtaat
    17161 ccgtattgcg gaacggcgcg gatttcctgc cttggttgta aatctgccaa tcggatcttt
    17221 gggtgtagcc gaaccacaga tccgcgcggg ttttaaacaa atcttcggca attttgcttt
    17281 tgaacgaaac ctgcaatttg gtttccgcac gtttctgctg tccgaatttt tcctgtacag
    17341 tcgtaccgcg cgtcggcgaa ctcggggcat agttgggcga attgttgtac cagagcggca
    17401 taaggtacat cggattgtgt tcgcgtacgc ccaacagccc gcgcaaatcg tttttgtcca
    17461 agtcgtacat caggctcaaa ggcgtataga tgtcggcggt ttcgcccgca ctgtcggcag
    17521 gaagcgcatc cccgcctttt tcaacaacaa tgaccgcctc gcccttatcc aggctgctgc
    17581 ggacggtttc cgtcagattg agtacagctt tcgactcctg cccttcctgt cctgccgaag
    17641 acggaagctg tgccgcaaaa atcctgtcgt aacacgccaa acgcgtaaca ttgtccgtca
    17701 aagcggcgca ttgcagcgcg gtctctccaa aagcggatgc catcggcaac agtcctgtca
    17761 aaagaatata gcgcatattc cgtgtattca tctccgcccc cattgtcggc atattggttt
    17821 tcaaacggca ttttatagcg gattcggata aaaaaccgca ccctttccgc catttcggga
    17881 tttagccccc gtaatacaga aaaccccgaa accgtcaggc ttcagggttt tccgcttatc
    17941 gcgtatcaac cgccttggcg gttttgcaaa aatcaagcca gtgcttttac ttttgcagac
    18001 agacggcttt tgtggcgtgc cgctttgttt ttgtggaaca cgcccttgtc ggcgatgcgg
    18061 tcgatgactt tgacggactc ttggtaaacc gcttgtgcgg cagctttatc gcctgcttcg
    18121 actgctttca atactttttt cactgcagtg cggaatgcgg tacgcaggct agcgttgtgg
    18181 gcgcgttgtt tgacggactg gcgggcacgt ttgcgtgctt gtgcgctgtt tgccatattg
    18241 gaatctcctg gaagaaaaat aaattctgta aacgcgcaat tttaaagggg gtttacatta
    18301 tatgcaagcc ttttctctct atccgcccgt cggacaccct gacagcgcaa aaaaacggca
    18361 aaatcgtgcg gacgttttcc ccctcttttg aaaacagggt aattttttag ggaaatcagt
    18421 ccaatatcac tttgagtttg cacaaattta ctttacaatg cccaaacctt gcgccggggt
    18481 aacgatgggg cgcggggatt tctttttttc caacctcttt catcaggaat ctgcccgtat
    18541 gaaaaaatcc gtattagccg ttttggccgc gctgtctctg gcagcctgcg gcggcagcga
    18601 aaaaaacgcc gtgcaacctc aagcagacgc tgcgtctgct gccaatgccg aagccgctgc
    18661 caccgatact ctgaacatct acaactggtc gaactatgtt gacgagagta cggtcgaaga
    18721 ctttaaaaaa gccaacaatc tgaagctgac ttacgacttg tacgaaaaca acgaaacgct
    18781 ggaagccaaa atgctgaccg gcaaatccgg ttacgatttg gttgtgccgg gcatcgcctt
    18841 cctgccgcgc caaatcgagg cgggcgcgta tcaaaaagtc aacaaagacc tgattcccaa
    18901 ctataaaaac atcgatcccg aactcttgaa aatgctggaa accgccgacc caggcaacca
    18961 gtatgccgtc ccctatttct ccggcgtgaa cacgattgcg attacggcga aaggcaaaga
    19021 gcttttaggc ggcaagctgc ccgaaaacgg ctgggatttg ctgttcaaac ccgaatacac
    19081 ccacaagctg aaatcctgcg gcatcgccct gtgggacacc ccgagcgaaa tgttcccgat
    19141 tttgctgaac tacttgggca aagaccccaa aggctcgaat cctgaagatt tgaaggcggc
    19201 ggcggaagtg ttgaagtcta tccgtccgga tgtcaaacgt ttcagcccgt ccatcatcga
    19261 cgagctggcg cgcggcgaca tctgcctggc ggcaggcaac ggcggcgatt tgaacttggc
    19321 gaaagcacgt tccgaagaag tgaaaaacaa cgtcggcatc gaagtgctga atccgaaagg
    19381 catgggcttc tggattgagt cttggctgat tcccgccgat gcgaaaaacg tcgccaatgc
    19441 ccacaaatac atcaactaca cgctcgaccc cgaaatcgcg gcgaaaaacg gcatcgccgt
    19501 aaccttcgcc cccgccagca aaccggcgcg cgaaaaaatg cctgccgagc tggtgaacac
    19561 ccgttccatc ttcccgaacg agcaggatat gaaagacggt ttcgtgatgc ctcaaatgag
    19621 tacggatgcg aaaaaactgt cggtcagcct gtggcagaaa atcaaagtcg gcaccaactg
    19681 atttgaagca ttaaaaatgc cgtccgaaca tcgttcggac ggcattttat attggattga
    19741 aatagaaccg tcgctcccac ggtcaggatt tcagattgcg gacatctgtc agaaaagaca
    19801 aaaaaccttc cgccgttatt ccctacaggc gagaatccga tccgttgaaa ttcggttgtt
    19861 ttaaataaat tcttgcagct ttgattttct gtttttccga taacgccgta actttgaaac
    19921 gcgaaagcgg gaatccggtc cgttgggatt ttgcaacttc aaatcaatcc gcaaactgaa
    19981 atcccgtcat tcccgcgcag tcgtgaatcc gaacgcgtcc gcacggaaac ct
//
LOCUS       DAWITQ010000020        19730 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.020, whole genome shotgun sequence.
ACCESSION   DAWITQ010000020 DAWITQ010000000
VERSION     DAWITQ010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19730)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19730)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19730
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.020"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            99..740
                     /locus_tag="WIX18_000613"
     CDS             99..740
                     /locus_tag="WIX18_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GrxB family glutaredoxin"
                     /protein_id="HEZ5237758.1"
                     /translation="MKLYIYDHCPFCVRARMAAGLFGADVEEAVLANDDEATPIGMIG
                     AKQVPVLQKEDGSFMGESLDIVRHFDREDRLKDEVRPEIRAWLDKVGGYNDKLVQPRV
                     IKIGLPEFATPEAVKYFTDKKEKSIGSFSANLNKTAQYLERINADLQELENLMDGASD
                     GINGGIGMEDILVFPVLRNLTVVRGIAFPRKTMDYLIGMSEKSGVPLYFDRAL"
     gene            1719..2519
                     /locus_tag="WIX18_000614"
     CDS             1719..2519
                     /locus_tag="WIX18_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEZ5237759.1"
                     /translation="MKKTIFNITKMDCPSEEQLIRMRLKDVSDIYELQFDIAGRCLTV
                     YHDNQDTTILQVLEPLNFDSHIISTEVIVDKIVFNKPDEHLEKRLLYQVLMINFVFFI
                     IECSVGIFANSMGLIADSLDMLADSFVYILALSAIGMTLAYKKRVAFLAGITQIILAL
                     FGVIEVIRRFIGAEQLPNYQLMIGTAFLALIANWLCLYLLSKNQNKEIHIKASMIFTF
                     NDIIINIGVIAAGALTLLTHSSYPDLIIGMIVFVIVLFGARNILKLAK"
     gene            complement(2971..3609)
                     /locus_tag="WIX18_000615"
     CDS             complement(2971..3609)
                     /locus_tag="WIX18_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HEZ5237760.1"
                     /translation="MFQNFDLGVFLLAVLPVLLAITVREVARGYTARYWGDNTAEQYG
                     RLTLNPLPHIDLVGTIIVPLLTLMFTPFLFGWARPIPIDSRNFRNPRLAWRCVAASGP
                     LSNLAMAVLWGVVLVLTPYVGGAYQMPLAQMANYGILINAILFALNIIPILPWDGGIF
                     IDTFLSAKYSQAFRKIEPYGTWIILLLMLTGVLGAFIAPIVRLVIAFVQMFV"
     gene            3864..4706
                     /locus_tag="WIX18_000616"
     CDS             3864..4706
                     /locus_tag="WIX18_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEZ5237761.1"
                     /translation="MDKERILTPAVVFSVALLHLAMVALLWQAHKLPVIESGNVIEFV
                     DLGDFGGGDGAPEGAGAPAAPEPQPEPEPPKPVEPPKPVLKPVVTKKADADIQQPKEE
                     PKPEEKPKPEEKPKPEPKPEAKPVPKPAEKPVERPSEKPAEHPSNASAKADSEQGNGE
                     DKGTGTKGDGTGRGEGSGKGSGGVKGEHGEGAGSSKGNPLRANGSIPRPAYPTLSMEN
                     DEQGTVVLSVLVSPGGHVESVKIVKSSGFSRLDNAARKAAQNGHFQANAWTEFKVPVK
                     FELN"
     gene            4772..5434
                     /gene="exbB"
                     /locus_tag="WIX18_000617"
     CDS             4772..5434
                     /gene="exbB"
                     /locus_tag="WIX18_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HEZ5237762.1"
                     /translation="MNLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRCIKLYRARK
                     GNAAVKRHMRDTLSLNDAVEKVRAVDAPLSKLAQEALQSYRNYRRNEASELAQALPLN
                     EYLVIQIRNSMAQIMRRFDYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMS
                     IAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQK
                     DS"
     gene            5455..5889
                     /locus_tag="WIX18_000618"
     CDS             5455..5889
                     /locus_tag="WIX18_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEZ5237763.1"
                     /translation="MAFGSMNSGDDSPMSDINVTPLVDVMLVLLIVFMITMPVLTHSI
                     PLELPTASEQTNKQDKQPKDPLRLTIDANGGYYVGGDSASKVEIGEVESRLKAAKEQN
                     ENVIVAIAADKAVEYDYVNKALEAARQAGITKIGFVTETKAQ"
     gene            complement(6380..6808)
                     /locus_tag="WIX18_000619"
     CDS             complement(6380..6808)
                     /locus_tag="WIX18_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01244 family phosphatase"
                     /protein_id="HEZ5237764.1"
                     /translation="MAILKLDEHLYISPQLTKADAEQIAQLGIKTVICNRPDREEESQ
                     PDFAQIKQWLEQAGVTGFHHQPVTARDIQKHDVETFRQLIGQAEYPVLAYCRTGTRCS
                     LLWGFRRAAEGMPVDEIIRRAQAAGVNLENFRERLDNARV"
     gene            complement(6873..8621)
                     /locus_tag="WIX18_000620"
     CDS             complement(6873..8621)
                     /locus_tag="WIX18_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M61 family metallopeptidase"
                     /protein_id="HEZ5237765.1"
                     /translation="MIHYKITPSPLDHEWHILLTFTQDDDLPIEISLPNWVPGSYLIR
                     DFSRHITSIHASCNGTSMPLEQIAKNRWHAAAVRGEWQIRYTVYAFDLSVRGSFLTTE
                     RGFFDGSCLFLKVEGTETLPHRLELTGIPSEWRIATTLPETGRFVFQAASYAELIDRP
                     VEMGLIEFLDFEAAGIPHTIALSGIYPDFDRNRLVSDIKKICETELAVFSSPAPFQKY
                     LFLLHVGDHIYGGLEHADSTALLADRHSLPPFGMTDADDAYTTLLGLFSHEYFHAWNV
                     KSIKPAAFAPYDLDKENYTEQLWAFEGITSYYDDLFLARSRTISPESYLNLLAQGITR
                     VQQTRGRLRQTLAESSFTAWNKFYKPDENSPNAIVSYYQKGALAALCLDLIIRNRSNG
                     RHSLDTIMDKLYREWRDTHSGIPEKHWQIRCQEITGLDLEDFFQKALYSTENLPLAEC
                     LATAGVGLTFLPLPRQHGGGYAEHICPVPSAGDFGARFKQNADHIVLTHVFNGGSAES
                     AALCPQDKIIALDGYACTDFTAQWARYHVNAKINIHFFRAGILRQTVLTVQAAAADTA
                     ILHITDRNLLDNWLFG"
     gene            8948..10381
                     /gene="ccoN"
                     /locus_tag="WIX18_000621"
     CDS             8948..10381
                     /gene="ccoN"
                     /locus_tag="WIX18_000621"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HEZ5237766.1"
                     /translation="MDTQTYNYKVVRQFAIMTVVWGIVGMLVGVIVAAQLFAPALDLS
                     NIGPWFHFGRLRPLHTNAVIFAFGGCGLIGTSYYVVQRTCNTRLFGGWLPAFTFWGWQ
                     AVIVAAVVSFPMGWTQGKEYAELEWPIDILITLVWVAYAIVFFGTIAKRKIKHIYVAN
                     WFYGGFILAVALLHIVNNISIPAGLMKSYPVYSGAIDAMVQWWYGHNAVGFFLTAGFL
                     GMMYYFVPKQAARPVYSYRLSVVHFWALIFTYMWAGPHHLHYTALPDWTQSLGMVLSL
                     ILFAPSWGGMINGIMTLSGAWDKLRTDPILKFLIVSLSFYGMSTFEGPMMSIKTVNAL
                     SHYTDWTVAHVHAGALGWVGFVTIGSVYYMIPRLFGKEQMHSTKLVEAHFWIATIGVV
                     LYIAAMWIAGVMQGLMWSSLNDDGTLTYSFVESVKRTMPYYVIRFAGGLLYLSGMCIM
                     AYNVYRTAIGGKAVDAEIPAVSQTQHH"
     gene            10408..11019
                     /gene="ccoO"
                     /locus_tag="WIX18_000622"
     CDS             10408..11019
                     /gene="ccoO"
                     /locus_tag="WIX18_000622"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HEZ5237767.1"
                     /translation="MKLQQLAEEKIGVLIVFTLLVVSVGLLIEVVPLAFTKAATQPAP
                     GVKPYNALQVAGRDIYIREGCYNCHSQMIRPFRAETERYGHYSVAGESVYDHPFQWGS
                     KRTGPDLARVGGRYSDEWHRIHLLNPRDVVPESNMPAFPWLARNKVDVDATVANMKAL
                     RKVGTPYSDEEIAKAPEALANKSELDAVVAYLQGLGLALKNVR"
     gene            11024..11194
                     /locus_tag="WIX18_000623"
     CDS             11024..11194
                     /locus_tag="WIX18_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CcoQ/FixQ family Cbb3-type cytochrome c oxidase
                     assembly chaperone"
                     /protein_id="HEZ5237768.1"
                     /translation="MDINGIRALFTVWIFICFLLVLYIVFNRRNKKNYDNAANSIFDE
                     NQDAQDKKSENR"
     gene            11218..12315
                     /gene="ccoP"
                     /locus_tag="WIX18_000624"
     CDS             11218..12315
                     /gene="ccoP"
                     /locus_tag="WIX18_000624"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit III"
                     /protein_id="HEZ5237769.1"
                     /translation="MNTTSQFTSNFWNIYIAVIVLLSFIALAWLLLSQNVVKRPKKGE
                     EVQTTGHEWDGIAEYDNPLPRWWFWLCVLTWLFGIGYLVMYPGVGDYKGLLKWTSHNQ
                     YEKEVKKADEQYGKLYAKFADMPIEKVAKDPQAKQIAQNLFNTYCIQCHGSDAKGSKG
                     FPNLTDSDWLWGGDPDKIHETIEKGRVATMPAWGPALGEEGVKDVAHYVMSLSKPEGQ
                     YDEERAARGQALFSGPPANCFTCHGDKGQGIQGLGPNLTDDVWLWGGTQKSIIETITN
                     GRSSQMPAWGHFLDKDKLHIMTAYVWGLSDKDGKALVKKAEPAPTPAPAAEPAASAPA
                     EAAQAASEAKPAAAEPKAEEKAAPAAKADGK"
     gene            12428..12553
                     /locus_tag="WIX18_000625"
     CDS             12428..12553
                     /locus_tag="WIX18_000625"
                     /inference="COORDINATES: protein motif:HMM:NF024834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c5 family protein"
                     /protein_id="HEZ5237770.1"
                     /translation="MHKHAIEGFNTMPAKGGRGDLSDDEVKAAVDYMVNQSGGKF"
     gene            12755..14164
                     /locus_tag="WIX18_000626"
     CDS             12755..14164
                     /locus_tag="WIX18_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEZ5237771.1"
                     /translation="MDTQIKTEADNQSNRRYLTVWRWHFYAGLLVMPFLTLLAVTGLG
                     MLLFANITGKEGERIHVVPQATVQPLSVQAEAARSAVNPETSSVVQYIAPRADDMVAV
                     FRVNNEGKATMVAVDPYTAKVVSTMPRNQGWYYAMDEIHSDMMLGSTGDYLLETAASL
                     TIIMIISGLYLWWVKRRGIKAMLLPPKGRARSWWRNLHGAFGTWVSLILLLFCLSGIA
                     WAGIWGGKFVQAWSQFPAGKWGVEPNPVSVVPTHGEVLNDGKVKEVPWVLELTPMPVS
                     GTTVGKDGINPDEPMTLETVDRFAREIGFKGRYQLNLPKGEDGVWTLSQDSMSYDMIS
                     PFADRTVHIDQYSGKILADIRFDDYNPFGKFMAASIALHMGTLGWWSVLANVLFCLAV
                     IFIGISGCVMWWKRRPTGAVGIVPPAQKVKLPVWWMMALPLLAIALLFPTALLAIAVI
                     WLLDTLLLSRIPVLRRWFK"
     gene            14266..17475
                     /gene="recC"
                     /locus_tag="WIX18_000627"
     CDS             14266..17475
                     /gene="recC"
                     /locus_tag="WIX18_000627"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HEZ5237772.1"
                     /translation="MFYLYQSNRLETLAALFARIQKVKPLKSVLQPEQIIVQSQGMRR
                     YLNTCLARDLGVAANLSFSLPAGLTWKLMKKLIPGIPELSPFAPEVMRWRLLDLFRSE
                     AFRNTAEFEDVRNVLQDYLGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQQGRILS
                     LGDDEIWQSKLWRYLDDGRQSAPHRVALWEKLLESLSSDKLPERYFVFGISTMAPMYL
                     QLLHKLSEHCDVFVFALNPSGMYWGNVIEAAQILKGGGDPDLTQAGHPLLASLGKQGR
                     DFFDFLNEMEIEGETPVFEEGSRDTLLHALQTDIQNLDMPSEKAGNINTDDGSIRIVS
                     AHSPLRELQILKDKLLKILHEHPDWQPHDIAVLTPNIESYTPFIEAVFGQAQPGAQAL
                     PYSVSDVKISRRQPFFYTLECLSDLLESRFEVDKVLVLLETAPVLRRFGLTEDDLPLL
                     HDMVADLNVRWGLDGEMRGGTDQLFTWKQAVERMILGWMLPEGGNPMWQDVSAWYADV
                     NQTALFGRFAALLETLSDIVRIWQQPATVGEWVARCRDLLETLFQTEADDQKAVQNLE
                     NEWVKWQAETELAQFSGQLPPHTVIRHIRRFLDSESEAGFLRGGITFCSMVPMRSLPF
                     KVICLLGLNDGDFPRNTKAAVFDLIAKHPAKGDRARRDDDRYLFLEALISAREILYLS
                     YIGRDIRKDEELAPSSLLGELIDTVAAMAGIGSRQLAQNWIEQHPLQAFSRRYFQEGG
                     RSDGIFGTRTDYATALGQTPEPPQPFFDQPVENAEPVAEIGQDEFIRFWRNPVKVWLQ
                     QQLAWSEPHIGEAWEPAEPFEPQHADQIAEIYIEARREGQDFSQTAARIRAESLLPSG
                     ELGRLWQQDFQTAAKQIDTAVLNSPKLPPLPYAIPSDGQILKGSLGNLYRCGQVFYAY
                     GKPNAPQRIAFLLEHLIFCAVMPSEAEMRQTFIVQSGETEILAEIAQDRALQLLSEWM
                     AFFNIGQNRPLPFFAKTSLAAAEAFAQKQDWEAALKKAQTAYYGSKVSKGQKDYTEVA
                     LVFGNASQNPLEQPLFENLVRLLADTFAAAEKKEEAGAA"
     gene            complement(17545..19113)
                     /gene="mtrF"
                     /locus_tag="WIX18_000628"
     CDS             complement(17545..19113)
                     /gene="mtrF"
                     /locus_tag="WIX18_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041421321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbgT family antimetabolite efflux transporter
                     MtrF"
                     /protein_id="HEZ5237773.1"
                     /translation="MSQTDTQRDGRFLRTVEWLGNMLPHPVTLFIIFIVLLLIASAAG
                     AYFGLSVPDPRPVGAKGRADDGLIHVVSLLDADGLIKILTHTVKNFTGFAPLGTVLVS
                     LLGVGIAEKSGLISALMRLLLTKSPRKLTTFMVVFTGILSNTASELGYVVLIPLSAII
                     FHSLGRHPLAGLAAAFAGVSGGYSANLFLGTIDPLLAGITQQAAQIIHPDYVVGPEAN
                     WFFMVASTFVIALIGYFVTEKIVEPQLGPYQSDLSQEEKDIRHSNEITPLEYKGLIWA
                     GVVFVALSALLAWSIVPADGILRHPETGLVSGSPFLKSIVVFIFLLFALPGIVYGRVT
                     RSLRGEQDVVNAMAESMSTLGLYLVIIFFAAQFVAFFNWTNIGQYIAVKGATFLKEVG
                     LGGSVLFIGFILICAFINLMIGSASAQWAVTAPIFVPMLMLAGYAPEVIQAAYRIGDS
                     VTNIITPMMSYFGLIMATVIKYKKDAGVGTLISMMLPYSAFFLIAWIALFCIWVFVLG
                     LPVGPGAPTFYPAP"
     gene            19447..19659
                     /locus_tag="WIX18_000629"
     CDS             19447..19659
                     /locus_tag="WIX18_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237774.1"
                     /translation="MKNEIQKIMDKYNPWHEDDFESYEDIAKDVSLMTDKTFIEHYLL
                     EVYSEENGHFDQENIHAMIGEIKNAI"
BASE COUNT         5112 a         4517 c         5134 g         4967 t
ORIGIN      
        1 ttatttattt acggtgcata ggcgggaaga taaacttgtt tcgggtggcg cggggtgtta
       61 aggtagccgg taccgacagg ttgacgagga atattttgat gaaactgtat atttacgacc
      121 attgcccgtt ttgcgtgcgt gcgcggatgg ctgccgggct gtttggcgcg gacgttgaag
      181 aagccgtgct ggcaaacgac gacgaggcaa cgccgatcgg tatgatcggt gcgaaacaag
      241 tgcccgtcct gcaaaaagaa gacggttcgt ttatgggcga gagtttggac attgtgcggc
      301 atttcgaccg cgaagaccgt ctgaaagacg aagtccgccc cgagatacgg gcgtggctgg
      361 acaaggtggg cggatacaac gacaaactgg tgcagccgcg cgtgatcaaa atcgggctgc
      421 ctgaatttgc aacgccggaa gcggtgaaat attttacaga caaaaaagag aaaagcatcg
      481 gcagcttttc cgccaatttg aataaaaccg cccaatacct cgaacggata aacgcagatt
      541 tgcaagagtt ggaaaatttg atggacggtg cttcagacgg catcaacggc ggaatcggta
      601 tggaggatat tttggttttc cccgttttga ggaatctgac cgtggtgcgc ggcatcgcgt
      661 tccctcggaa gacgatggat tatttaatcg gtatgagtga aaaatcgggc gtgccacttt
      721 atttcgacag ggcattgtaa aagtggctgt tattaactga cagatgaagg aggttctacc
      781 ctatttgagg taaactctat ttaccattgg ccgaaatacc agtgcttatc tccaagacga
      841 ccttcccaat cccttttgcc tcttaaaaag aagtgactag tgtgtaaagt tatagttcct
      901 tttatagctt tccaataaaa ttaaagtatt taaaagcttg tttagttcta atttgttaat
      961 ttctgtatct aaataatgtt cagaatagta ttatttttta aataaaccat gaatagtact
     1021 tcacattgtt tgtcgtatta tttagctttt aaatttctaa tgtgaaagat agtttaatgg
     1081 acgcctttga tttttttatg caaggcaatt ttaaaaaaat tgcaactgaa caaggtttag
     1141 accgtaaata ttttatattc cactatatcg tatgtaattt atctgccatt tcttcttttt
     1201 gtttaatgaa ggttatccat agttatacta tcctttgttt attaataatg ataattggca
     1261 ttgcatttgg atttatcttg agaaataggg ttctatctat agtaaaaaat aaacaaaatt
     1321 ttttatctga tatgtttccc ttggaaatgc ctttcttttc tagagtatac aaaataccta
     1381 tcttggccag attcttgaat aggggaatga aatggcttta tctccaaaat tttttctgtt
     1441 tagttatgat ttgtttctcg atatctctta tccttaatga agaaaggggg tggatgcctt
     1501 attttgcctg ctattggttt ggactttgtt atccagtaag cacttattac gtttttttat
     1561 ccagagatta taaacatatc taaactatta tgcgtggcgg tacttccaaa ggtaaatttt
     1621 aacctaatca atttactcaa accatccaaa aattaccaag cagcaatata aacacagatt
     1681 tatttgagcc aacctgatca aaacaaggaa ctaaatagat gaaaaagacc atttttaaca
     1741 ttaccaaaat ggactgcccg tccgaagaac agctcattcg catgcgttta aaagatgtgt
     1801 ctgatattta tgaattacag tttgatattg ctgggcggtg cttaaccgtc tatcacgata
     1861 atcaagatac aacgatttta caagtacttg aaccgcttaa ttttgatagt catatcattt
     1921 ccaccgaagt gattgttgat aagatagtgt ttaacaagcc tgatgagcac ttagaaaaaa
     1981 gattattata tcaagtgctc atgattaact ttgtgttttt tatcatagag tgttcggttg
     2041 gtatttttgc taattctatg gggctgattg ctgatagtct agatatgctg gcggacagct
     2101 ttgtctatat attggcgcta tcagccattg gtatgacgct ggcgtataaa aaacgtgtgg
     2161 catttttggc ggggataacg cagataatat tggcgttatt tggggtgata gaagtgatta
     2221 ggcgttttat cggtgctgag cagctgccca attatcaact gatgattggc acggcatttt
     2281 tggcattgat tgcaaactgg ctgtgcttat atctactgag caaaaatcaa aataaagaaa
     2341 tccatatcaa agccagcatg atttttacat tcaatgacat tatcatcaat atcggtgtga
     2401 tagcggcggg agcattgacg ttattgactc attctagcta tcctgattta atcattggca
     2461 tgattgtctt tgtcattgta ctatttggtg ccagaaatat tttaaaattg gcaaaataat
     2521 tcctttcacc agcaaaggag tttttatgca aatatcggtc aaagctacct acatacgtgg
     2581 cagtacttcc aaaaacttga ttttttaaaa tgtggttaat gcgagtttgt ttatctggta
     2641 tttgattggc caagccttca tccaagcgtt tgacgatttc acgcaaaaat acccctgatt
     2701 tacacacagg gtctaagaat gtcgcctttg gatttgacca aatctcagac ggcaataaat
     2761 ccagcatttg attggcaagt tttggcgatg tgaaaacctc atcattagac agactggagt
     2821 ttcttaatca gtgtttcagt taatgaaagg tattatcatg caacttggtt ctaataatga
     2881 tgaaaaaaat aagattacac tacaggaaaa cgcggcaggg caatatgtcc tgccgcgttt
     2941 tctggagcgt ttatgccgtc tgaaagccag tcagacgaac atctgcacaa acgcaatcac
     3001 cagccgcaca atcggtgcaa taaacgcacc caaaaccccg gtcagcataa gcagcaggat
     3061 aatccacgtc ccataaggtt cgattttgcg gaacgcttgc gaatatttcg ccgacaggaa
     3121 ggtgtcgatg aaaatgccgc cgtcccaagg caggatgggg atgatgttga gcgcgaacag
     3181 aatcgcattg atcagaatac cgtagtttgc catttgagcc aacggcatct gatacgcccc
     3241 accgacatac ggagtcagca ccaaaaccac gccccacaga acagccatcg ccagattcga
     3301 cagcgggccg gacgcggcaa cgcaacgcca ggcaaggcgc gggttgcgga agttgcgcga
     3361 atcgatagga atcggacgcg cccagccgaa caggaagggc gtaaacatca aagtaagcag
     3421 cggtacgatg attgtgccga ccaaatcgat atggggcagg gggttcagtg tcagcctgcc
     3481 gtattgttcg gcagtgttgt ctccccagta gcgcgccgta tagccgcgcg ccacctccct
     3541 gacggtaatg gcgagcagca cgggcaggac ggcaagcaga aacacgccca aatcaaaatt
     3601 ttgaaacatg gttttccttt gaacagatgt ggtgtgcagc ccgaaacggc tgacagacag
     3661 aagcggcaat atatcatcta acctgatttt attggaataa gaaatcagac ggaatcattt
     3721 tttctgccgg cccgttatct gatgatttgc tgtaatacag cgtttaaaca cggtttgcct
     3781 gtgaacggaa cagacattca tatgaccaaa aattgtaaaa ataggttgca aataggaatt
     3841 gttgctatta ttatgcccga attatggata aagaacgaat tttaaccccc gcagtcgtgt
     3901 tttccgtcgc actgctgcat ttggcaatgg tggcattgct ctggcaggcg cacaagctgc
     3961 ccgtgataga gtcaggaaat gttatcgaat ttgtcgattt gggtgatttt ggcggagggg
     4021 acggtgcacc cgaaggcgca ggtgcgcctg ctgcgcctga gccgcaacct gagcctgagc
     4081 cgcccaaacc tgtcgagccg cccaagccgg ttttgaagcc ggtggttacg aaaaaggcgg
     4141 atgcggatat tcagcagcct aaggaagagc cgaaacctga agaaaagccg aaacccgaag
     4201 aaaaaccgaa accagagcct aagccggaag cgaagcctgt cccgaaaccg gcggaaaaac
     4261 cggtcgagag gccgtctgaa aaacctgccg aacatcccag caatgcttct gccaaagcag
     4321 acagcgagca gggtaatggg gaagataagg gaaccggtac caaaggagac ggaacggggc
     4381 gcggagaagg cagcggtaaa ggtagcggcg gtgtcaaagg cgaacacggg gaaggagccg
     4441 gcagcagcaa aggcaatcct ttacgcgcca atggcagcat tccgcgcccg gcttatccca
     4501 cgctttctat ggagaatgac gagcagggta cggttgtttt gagcgttttg gtttctccgg
     4561 gcggtcatgt cgagtccgtt aaaatcgtga aaagcagtgg tttttctcgg ttggacaatg
     4621 cggcacgcaa ggcggcgcaa aacgggcatt ttcaagccaa tgcctggacg gagtttaaag
     4681 tccccgtcaa gtttgaattg aattaggcgg ttgccgcagc ggtttgcggc agcttggatg
     4741 tttgattggt tttttcagtg ttggaatcat tatgaatttg aaattagtat ttgaatcggg
     4801 cgatcccgtc ctgatcggtg tgtttgtgtt gatgctgttg atgagtatcg taacgtggtg
     4861 tttggttgtc ttgcgctgca tcaagctgta tcgggcgcgc aaagggaatg ccgccgtcaa
     4921 acggcatatg cgcgatactt tgtcgctgaa cgacgcggtc gaaaaagtgc gcgccgtcga
     4981 tgcgcctttg tccaaactgg cgcaagaggc attgcagtct taccgcaact accgccgaaa
     5041 cgaagcgtcc gaactggcgc aggctttgcc gttgaacgag tatttggtca ttcaaatccg
     5101 caacagtatg gcgcagatta tgcgccggtt tgattacggg atgaccgcgc ttgcctccat
     5161 cggcgcgacc gcgccgttta tcgggctgtt cggcacggtt tgggggattt accacgccct
     5221 gatcaatatc gggcaaagcg ggcagatgag tattgcggcg gttgccggcc cgattggcga
     5281 ggcactggtg gcgacggcgg cgggtttgtt cgtggcgatt ccggcggtgt tggcatacaa
     5341 cttcctcaat cgcggcacaa aaatactgac ccaggatttg gatgcgatgg cgcacgattt
     5401 gcacgtccgc ctgcttaatc aaaaggatag ctgattataa aaggatagct gattatggca
     5461 tttggttcga tgaattccgg cgacgattct ccgatgtccg acatcaacgt tacgccgttg
     5521 gtggacgtga tgctggtgtt gctgattgtg tttatgatta ctatgccggt gctgacgcat
     5581 tccatccctt tggaactgcc gaccgcgtcc gagcagacaa acaagcagga caaacagcct
     5641 aaagaccccc tgcgcctgac gattgatgcg aacggcggct attatgtcgg cggggattct
     5701 gcaagcaaag tggaaatcgg ggaagtggaa agccgtctga aagccgccaa ggagcagaat
     5761 gaaaacgtga ttgtggcgat tgcggcagac aaggcggtgg aatacgatta tgtaaacaaa
     5821 gctttagaag ccgcccgtca ggcaggaatc accaaaatcg gttttgtaac cgaaaccaag
     5881 gcgcaataaa gttcgacgct tgaacgaatg ccgtctgaaa gtctttcaga cggcatttct
     5941 tatgtttaat cagctatata tagttgatta aaacaaaaat gagacgacag agcgccgtct
     6001 ccatttctgc gcaggcggga atacaaacat ctgatttttc ttttattttc aaacattact
     6061 gaaatgggta agtctggagt cctgcctgcg cgagaataat gaaaatgtgc atttctaatt
     6121 tttatagtgg attaacaaaa atcaggacaa ggcaacgaag ccgtagacag tacaaatagt
     6181 acggaaccga ttcacttggt gcttcagcac cttagagaat cgttctcttt gagttaaggc
     6241 gaggcaacgc cgtactggtt tttgttaatc cgctataccc actgtaaaaa cggagaagga
     6301 cagaggacgg cagtaaggtt tgccgtcctc tttttcaagt tgcggtggaa tgccgcttga
     6361 aggtgttttc ggcttgtaat cagacgcggg cgttgtccag ccgctctctg aaattttcca
     6421 aatttacgcc tgccgcttgg gcgcggcgga tgatttcgtc aaccggcata ccttctgccg
     6481 cccggcggaa gccccacagg agggagcagc gcgtaccggt ccggcaatag gcaaggacgg
     6541 gatattcggc ttgtccgatg agttggcgga aggtttcgac atcgtgtttt tggatgtcgc
     6601 gtgcggtaac gggttggtga tggaatccag taacgcctgc ttgttccagc cactgtttga
     6661 tttgggcgaa gtcgggttgc gattcttctt cgcggtcggg gcggttgcag atgacggttt
     6721 tgatgcccag ttgcgcgatt tgttccgcat cggctttggt cagttgcgga gaaatataga
     6781 ggtgttcgtc aagtttcaga atggccattt tgtttccttt actttgcggt tgtttttcag
     6841 acggcatttt gtgtgcaatg ccgtctgaaa gtttaaccga acaaccagtt gtccaacagg
     6901 ttccggtctg tgatatgtag gatggcagta tccgctgccg ctgcctgaac cgtcaagacg
     6961 gtttgacgca atatgccggc acggaagaag tggatattga tttttgcatt gacgtggtat
     7021 cgggcccatt gtgcggtaaa gtcggtgcag gcataaccgt ctaaagcaat gattttgtct
     7081 tgcggacaca gtgccgcaga ttccgcgctg ccgccgttga agacatgggt caggacgatg
     7141 tggtcggcgt tttgtttgaa acgtgcgcca aaatcgcctg ccgacgggac ggggcagatg
     7201 tgttctgcgt atccgccgcc gtgttgtcgg ggaagcggca ggaaggtcag tcccacgcct
     7261 gcggttgcca ggcattcggc aagcggcaaa ttttcggtac tgtataacgc tttttggaaa
     7321 aaatcttcca aatccaagcc ggtaatttcc tgacagcgga tttgccagtg tttttccgga
     7381 atacccgagt gtgtgtccct ccactcccga tagagtttgt ccattatcgt atcgagagaa
     7441 tgtctgccgt tgcttcggtt gcgtattatc agatcaaggc acaatgcggc aagcgcgcct
     7501 ttctggtagt agctgacgat ggcgttgggg ctgttttcat caggtttgta aaatttgttc
     7561 cacgcggtaa aactcgattc cgccaaggtc tgcctcaaac ggccgcgggt ttgttgtacg
     7621 cgcgtaatgc cttgtgccag caggtttaaa taagattcgg gcgagatggt gcggctgcgt
     7681 gccaaaaaca aatcgtcgta ataggatgta atgccttcga atgcccatag ttgttcggta
     7741 tagttttctt tgtcgaggtc ataaggggcg aacgcggcag gtttgatgga tttgacgttc
     7801 cacgcgtgaa aatattcgtg ggagaaaagt ccgagcaatg tggtgtaggc atcgtcggca
     7861 tcggtcatac cgaacggcgg aaggctgtgg cggtcggcga gcagggcggt gctgtcggcg
     7921 tgttccaaac cgccgtaaat atggtcgccg acgtggagca ggaacaaata tttttgaaac
     7981 ggggcagggg aggaaaacac cgccagttct gtttcgcaga tttttttgat atccgaaacc
     8041 agcctgttgc ggtcgaaatc gggatagatg ccgcttaagg caattgtgtg cggaatgcct
     8101 gccgcctcaa aatctaaaaa ttcaatcaag cccatctcga caggtcggtc aatcaattcg
     8161 gcataagatg ccgcctgaaa gacaaacctc cctgtttccg gcagcgttgt ggcaatacgc
     8221 cattcggacg gaatacccgt caattccaag cggtgcggca gcgtttccgt tccttcgact
     8281 ttcaaaaaca ggcacgatcc gtcaaaaaaa ccgcgttctg tcgtcaggaa agaacctcga
     8341 accgacaaat cgaatgcata tacggtgtag cggatttgcc actcgccgcg tacggcggca
     8401 gcgtgccagc ggttttttgc aatttgttcg agcggcatgg acgtgccgtt acaggatgca
     8461 tggatagaag tgatgtggcg ggaaaaatcc cgaatcagat agctgcccgg aacccagttt
     8521 ggcaggctta tttctatagg aagatcatca tcttgtgtga atgtcagcag gatgtgccac
     8581 tcgtggtcga gaggggacgg ggttatttta taatgaatca taactatcaa atatatcgtt
     8641 aaacgggatg gattaaatac ctttaaaatg cagcttaacc tacatcaata aagtgccaca
     8701 aaaagggaaa attggaaaca aaagcaatgg cggtcgggtt gtaatttatt ataacaatat
     8761 gatttatatg taataaaaaa cagattaagc aaagggctcg ccggcggcgc gaatgtaatt
     8821 ccgcttggcg taataaggca gatatgttaa atttagaaaa aattacgctt gcccggattg
     8881 caccttaaac aggctgcgga agcggcagga taaaaatctt tattcccata aattcatgga
     8941 gactctcatg gacacacaaa cttacaacta caaagtggtg cgccagttcg ccatcatgac
     9001 tgtagtttgg gggattgtgg gtatgttggt cggcgttatc gtcgccgccc agctttttgc
     9061 tcctgccctt gacttgtcta atatcggacc ttggttccac ttcggccgcc tgcgtccgct
     9121 gcacaccaat gcggttattt tcgcatttgg cggttgcggc ctgatcggca catcatacta
     9181 cgttgtccaa cgtacttgta atacccgtct tttcggcggt tggctgccgg catttacctt
     9241 ttggggctgg caggcggtaa tcgttgccgc cgtcgtcagc ttccctatgg gttggaccca
     9301 aggtaaggaa tatgccgaac tggaatggcc gatcgatatt ctgattactt tggtttgggt
     9361 ggcttacgcc atcgtattct tcggtacgat tgccaaacgt aagattaaac atatttacgt
     9421 tgccaactgg ttctacggcg gctttatttt ggcggtcgca cttttacaca tcgtcaacaa
     9481 tatcagcatc ccggcagggt tgatgaagtc ataccccgtc tattccggtg cgattgatgc
     9541 tatggttcaa tggtggtacg ggcataacgc cgtgggcttc ttcctgactg ccggcttctt
     9601 gggtatgatg tactatttcg tacccaaaca agcagcccgc cccgtttact cctaccgcct
     9661 gtccgtcgtt cacttctggg cgttgatttt tacctatatg tgggcgggtc cgcaccatct
     9721 tcactacact gcgctgcctg actggacgca atctttgggt atggttctgt ctttgattct
     9781 gttcgcaccc tcttggggcg gtatgattaa cggcatcatg accttgtccg gcgcgtggga
     9841 caaactgcgt acagacccga ttcttaaatt cctgattgta tccttgtcct tctacggtat
     9901 gtctaccttt gaaggcccga tgatgtcgat taaaacggtc aatgcattga gccactatac
     9961 ggactggacc gtcgcgcacg ttcatgcggg tgcgttgggc tgggtaggct ttgtaaccat
    10021 cggttccgtc tattacatga ttccccgtct gttcggcaaa gaacagatgc acagcaccaa
    10081 gctggtagaa gcacattttt ggattgcgac catcggcgtg gttctgtata tcgctgccat
    10141 gtggattgcc ggtgtgatgc agggtttgat gtggagttct ttgaacgatg acggtacgct
    10201 gacctactcg tttgtcgaat ccgtaaaacg caccatgcct tactacgtga tccgttttgc
    10261 aggtggttta ttgtatctga gtggtatgtg cattatggcg tacaacgtgt accgcacagc
    10321 catcggtggt aaagcagtcg atgccgaaat ccctgcggtt tcccaaacac agcaccacta
    10381 aaatactaag aaagataggc taccaaaatg aaattacaac aattggctga agaaaaaatc
    10441 ggcgttctga ttgtgttcac gctgcttgta gtcagtgtcg gtctgttgat tgaagttgtg
    10501 cccttggcct ttaccaaggc ggcaacacag ccggcgccgg gcgtgaagcc ttacaatgcc
    10561 ttgcaggttg ccggacgcga tatttacatc cgtgagggct gttacaactg ccactctcaa
    10621 atgattcgtc cgttccgtgc ggaaaccgag cgttacggtc attactctgt tgccggagag
    10681 tcggtttacg accatccgtt ccaatggggt tccaaacgta ccggtcctga tttggcacgt
    10741 gtgggcggtc gctattccga cgaatggcac cgtatccacc tgctgaatcc ccgtgatgtc
    10801 gtgcctgagt ccaatatgcc ggcattcccg tggcttgcac gcaataaagt cgatgtcgat
    10861 gcaaccgttg ccaacatgaa ggctttgcgt aaagtaggta ctccttacag tgatgaggaa
    10921 attgcgaaag cacctgaggc tttggcaaac aaatccgagc tggatgctgt agtcgcctat
    10981 ctgcaaggat tgggtctggc tttgaaaaac gtaaggtaac atcatggata ttaacggtat
    11041 tcgtgctctc ttcacggtat ggatctttat ctgtttcctg ttggtactct atatcgtctt
    11101 caacaggcgg aataagaaaa actacgataa tgccgcaaac agcatttttg atgaaaacca
    11161 agatgcgcaa gataagaaaa gcgaaaaccg ttaatattgt gataacggag caaaacaatg
    11221 aacacaacat cccaatttac tagtaatttc tggaatatat atattgcagt tattgtctta
    11281 ctgagcttta tcgctttggc ttggctgctg ctgtctcaaa atgttgtcaa acgtccgaag
    11341 aagggcgaag aagtacaaac tacgggtcat gagtgggacg gcattgccga atacgacaat
    11401 ccgctgcccc gctggtggtt ttggctgtgt gttttgacgt ggctgttcgg tatcggttat
    11461 ttggttatgt atccgggtgt cggcgactac aaaggtctgc tgaaatggac cagccataac
    11521 caatatgaaa aagaggtcaa aaaagccgat gagcaatacg gcaaactgta tgccaagttt
    11581 gcggatatgc cgattgaaaa agtggcaaaa gaccctcaag ccaagcaaat cgcccaaaac
    11641 ctgtttaaca cttattgtat ccagtgccac ggctctgatg ctaaaggctc taaaggtttt
    11701 ccgaatctga ccgatagcga ttggttgtgg ggcggtgatc ccgataaaat tcacgagacc
    11761 atcgaaaaag gccgtgttgc gactatgcct gcctggggcc ctgctttggg cgaagaaggc
    11821 gtgaaagacg ttgcccatta tgtgatgtcc ctttcaaaac ccgaaggtca gtatgatgag
    11881 gaacgtgccg cgcgcggaca agccttgttc agcggtccgc ctgccaactg tttcacttgc
    11941 cacggcgata agggacaagg tatccaaggt ttgggtccga acctgactga tgacgtgtgg
    12001 ttgtggggcg gtacgcaaaa atccattatc gaaaccatta ccaacggtcg cagcagccaa
    12061 atgcccgctt ggggacattt cttggataaa gacaaactgc atattatgac tgcttatgta
    12121 tggggtcttt ccgataaaga cggtaaagct ctggtgaaaa aagccgagcc tgcaccgact
    12181 cccgcaccgg cggcagaacc cgcagcctct gctcctgcag aagcagcaca agccgcgtcc
    12241 gaagccaaac ctgccgcagc agaacctaaa gccgaggaaa aagccgcacc tgctgccaaa
    12301 gcggacggca aataggttta tgaaaccgtt tgtgccgcct gccatggcaa tgcggttccg
    12361 ggtattcccc atgtaggcat caaagccgat tgggccgacc gcatcaaaaa aggcaaggac
    12421 acgttcgttg cacaaacacg cgatcgaagg tttcaatacg atgcccgcaa aaggcggtcg
    12481 cggcgatttg agcgatgatg aagtgaaagc tgcggttgac tatatggtca accagtcagg
    12541 cggcaaattc taacttgact gagtttccga tattatcggt tatgaaaatc cagattcagt
    12601 attgaatctg gattttttgt tttaacgggc atccggtttt aaacgcagac tgcctatttg
    12661 ttgtaatgaa ttttgacttt agtcataaag aattagtctt tattgtttat aatcgcgcat
    12721 catcacgata gccctatttt caaaaggacg attaatggat acacaaatca aaactgaagc
    12781 cgacaatcag agcaaccggc gttatctgac cgtttggcgg tggcattttt atgccggtct
    12841 gctggttatg ccttttctta ccctgcttgc cgttacgggt ttgggtatgc tgctgtttgc
    12901 caatattacc ggtaaggagg gcgagcggat tcatgttgtg ccgcaggcaa cggtacaacc
    12961 tctgtctgtt caggcggaag cggcacgcag tgccgttaat ccggaaactt cgtccgtcgt
    13021 tcagtatatt gcgccgcgtg ccgatgatat ggttgccgtg ttccgtgtca acaatgaggg
    13081 caaggcaacg atggtcgcgg tcgatcctta tacggcaaaa gtggtcagta ccatgccgcg
    13141 caatcagggt tggtattacg cgatggatga aatccacagc gatatgatgc tcggttcgac
    13201 aggtgattat cttttggaaa cggctgcatc gctgacgatt atcatgataa tcagcggttt
    13261 gtacctttgg tgggtgaaac ggcgcggcat caaggcgatg ctgctgccgc caaaaggcag
    13321 ggcgcgttct tggtggcgga atctgcacgg cgcgtttgga acttgggtgt cgttgatttt
    13381 actgttgttc tgcctgtcgg gtattgcttg ggcaggtatt tggggcggca agttcgtgca
    13441 ggcttggagt cagttcccgg ccggcaaatg gggtgtcgaa ccgaaccctg tttcagtcgt
    13501 gccgacccac ggcgaggtat tgaatgacgg caaggttaag gaagtgccgt gggttttgga
    13561 gcttacgcct atgcctgttt cagggacgac tgtgggcaaa gacggtatta accctgacga
    13621 gccgatgaca ttggaaaccg tcgaccgttt tgcgcgggaa atcggtttca aagggcgtta
    13681 tcagttgaat ttgcccaaag gcgaggacgg agtgtggact ttgtcgcagg attctatgag
    13741 ttacgacatg atcagcccgt ttgccgaccg cacggtgcat atcgaccagt acagcggcaa
    13801 aatccttgcc gacatccgct ttgacgatta caacccgttc ggcaaattta tggcggcaag
    13861 cattgcgctg catatgggta ctttgggctg gtggagcgtg ttggcgaacg ttttgttctg
    13921 ccttgccgtc atttttatcg gtatcagcgg ctgcgtgatg tggtggaaac gccgtccgac
    13981 cggagcggtg ggcatcgttc cgccggcgca gaaagtcaag ctgccggttt ggtggatgat
    14041 ggcattgccg ctattggcaa tcgcactgct cttcccgacc gcactgcttg ccattgccgt
    14101 gatttggctg ttggatacct tgctgctgtc gcggattcct gttttgagga gatggtttaa
    14161 atgacccgat gccgtctgaa gcgttcagac ggcattttgt ttgaaggcgg gcgggggaaa
    14221 ggctatataa tcccgaatac ttgaccacag cttctgtttg aaatcatgtt ttatctgtat
    14281 caatccaacc gtcttgaaac gctggcggca ctgtttgccc gcattcaaaa agtcaaaccg
    14341 ctgaaatcgg ttttacagcc cgaacagatt attgtgcaga gtcaggggat gcgccgctac
    14401 ctcaatacct gcctcgcccg cgatttgggc gtggcggcga atttgtcgtt cagcctgccc
    14461 gccggtctga cgtggaagct gatgaaaaaa ctgattcccg gtattccgga actcagcccg
    14521 tttgcgcctg aagtgatgcg ctggcggctg ttggatttgt tccgcagcga ggcatttcgg
    14581 aatacggcag aatttgaaga tgtgaggaat gtgctgcaag actatctggg cagcggcgaa
    14641 tcggcggatt atcagcttgc tggccagctt gcagacatat ttgaccaata cctcgtgtat
    14701 cgtccgcagt ggatagacgc gtggcagcag ggcaggatac tcagtttggg cgacgatgaa
    14761 atctggcagt ccaaactgtg gcgttatctt gatgacggca ggcagagcgc gccgcaccgt
    14821 gttgcgttgt gggaaaagct gttggaatct ttgagcagtg ataagctgcc cgagcgttat
    14881 ttcgtgttcg gcatttccac gatggcgccg atgtatttgc agcttttgca caagctgtcc
    14941 gaacattgcg atgtgttcgt gtttgcactc aatccgagtg ggatgtattg gggcaacgtc
    15001 atcgaagcgg cgcaaatcct caaaggcggc ggcgatcccg atttaactca ggcagggcat
    15061 ccgctgctcg cctcattggg caagcagggg cgcgactttt tcgacttttt gaacgaaatg
    15121 gaaatagaag gagaaacgcc ggtgtttgaa gaaggcagcc gcgatacgct tttgcacgcc
    15181 ctgcaaaccg atatccaaaa cttggatatg ccgtctgaaa aagcgggaaa tattaatacg
    15241 gacgacggat cgatacgcat cgtctccgca cacagccctt tgcgcgaatt gcagatactc
    15301 aaagacaaac tgttgaaaat tctgcatgaa catcccgatt ggcagccgca tgatatagcc
    15361 gtattaaccc cgaacatcga atcctatacg ccttttatcg aagccgtgtt cggacaggcg
    15421 cagcccggtg cgcaggcatt gccgtattcc gtttcagacg tgaaaatcag ccgccgacaa
    15481 ccgttttttt atacattgga atgcctgtcc gacttgttgg aaagccgatt tgaagtcgat
    15541 aaagtgcttg tgcttttaga aaccgcaccc gtgttgcgcc gtttcggact gactgaggac
    15601 gatttgccgc ttttgcacga catggttgcc gatttgaacg tccgctgggg tttggacgga
    15661 gaaatgcgcg gcggcacgga tcagctgttt acctggaagc aggcggtaga acgcatgata
    15721 ttgggctgga tgctgcccga aggcggcaat ccgatgtggc aggatgtcag cgcgtggtat
    15781 gccgacgtga accaaaccgc cctgttcgga cgttttgccg ccctcctcga aaccctgtcg
    15841 gatattgtac ggatatggca gcaacctgcg acggtcggcg aatgggtggc gcgttgccgg
    15901 gatttgcttg aaacattgtt ccaaaccgaa gccgatgacc aaaaggcagt ccaaaacctc
    15961 gaaaacgaat gggtcaaatg gcaggcggaa accgaattgg cgcaattttc cggacagttg
    16021 ccgccgcaca ccgtcatccg ccacatccgc cgctttctcg acagcgaaag cgaggcaggc
    16081 tttttacgcg gcggcatcac cttttgcagt atggtgccga tgcggagcct gccctttaaa
    16141 gtcatctgtc tgttgggttt gaacgacgga gattttcccc gcaataccaa agccgccgta
    16201 ttcgacctga ttgccaaaca tcccgccaaa ggcgaccgcg cccgccgcga tgacgaccgc
    16261 tacctgttcc tcgaagccct catcagcgcg cgtgaaatcc tctacctgtc ctacatcggg
    16321 cgcgacatcc gcaaagacga agagcttgcc ccgtcttccc tgttgggcga actcatcgat
    16381 accgttgccg ctatggcggg catcggtagt cgccaacttg cacaaaactg gatagaacag
    16441 catccgctgc aagccttttc acgccgatat ttccaagaag gcggacgttc agacggcata
    16501 ttcggcacgc gtaccgacta cgccaccgcg ctcggacaaa cgcccgaacc gccgcaaccc
    16561 tttttcgacc aacccgtaga aaacgccgaa cctgttgccg aaatcggaca ggacgaattt
    16621 atccgtttct ggcgcaaccc cgtcaaagta tggcttcagc agcagcttgc gtggagcgaa
    16681 ccccatatcg gcgaagcctg ggagcctgcc gaacccttcg agccgcaaca cgccgatcaa
    16741 atcgccgaaa tctatattga ggcgcgccgc gaaggacaag atttttccca aaccgccgcc
    16801 cgcatcaggg cggaaagcct gctgccgtcg ggagagttgg gcagactttg gcagcaggac
    16861 ttccaaaccg ctgccaaaca aatcgacacg gcggttttaa acagtcccaa acttcctccg
    16921 ctgccctacg ccataccgtc ggacgggcaa atcctgaaag gcagcttggg caatctgtac
    16981 cgctgcggac aagtgtttta cgcctacggc aaacccaacg cgccgcaacg tatcgctttt
    17041 ttgttggaac acctgatatt ttgcgccgtt atgccgtctg aagccgaaat gcggcaaacc
    17101 tttatcgtcc aatccggaga aaccgaaata ttggcggaaa tcgcgcaaga cagggcattg
    17161 cagctattgt cggaatggat ggcgtttttc aatatcgggc aaaaccgccc gctgccgttt
    17221 tttgccaaaa cctcgcttgc cgccgccgaa gcgtttgccc aaaaacaaga ttgggaagcc
    17281 gccctgaaaa aagcccaaac cgcctattac ggcagcaaag tcagcaaagg gcagaaagac
    17341 tataccgaag tcgccctcgt gttcggcaac gcaagccaaa acccgctcga acagcccctg
    17401 tttgaaaacc tcgtccgtct gcttgccgac acgtttgccg cagcggaaaa aaaggaagag
    17461 gccggagcag cctgacggga tggaaaggca aatgccgtct gaaaacagca aaaaggtttt
    17521 cagacggcat tttgtttatc gtgtttaagg tgcgggatag aatgtgggcg cgccgggacc
    17581 gacgggcagg cccaaaacaa atacccaaat gcagaataag gcaatccacg caatcaagaa
    17641 gaaagcggaa tacggcaaca tcatagaaat cagcgtaccc acgcccgcat cttttttgta
    17701 tttgatcacc gtcgccataa tcagcccgaa ataactcatc atcggcgtaa taatattggt
    17761 aacggaatca ccgatgcggt aagcggcttg aatgacttcg ggcgcgtagc cggccaacat
    17821 cagcataggg acgaaaatcg gcgcagttac cgcccattgc gcggaggcgg agcctatcat
    17881 cagattgata aaagcacaaa ttaaaataaa accgataaac aacacgctgc cgcccaagcc
    17941 gacttctttt aagaacgtcg cccctttaac ggcaatatat tgcccaatat tcgtccaatt
    18001 aaaaaatgcg acaaactgtg cggcaaaaaa gatgatgacc aaataaagcc ccagagtact
    18061 catcgattcg gccatcgcat taacgacatc ctgttcgccg cgcaaacttc gggttacccg
    18121 gccataaaca atgcctggca gtgcaaacaa caagaaaata aaaacaacaa tcgattttaa
    18181 aaacggcgaa ccggaaacca atcctgtttc aggatgacgc aaaataccgt cggcagggac
    18241 gatactccaa gccaataggg cggataaggc aacaaacacc acgccagccc aaattaatcc
    18301 tttatattcc aaaggcgtga tttcattgga atgccgaatg tctttttctt cttgtgacaa
    18361 atctgattga taagggccca attgcggttc gacgattttt tcagtaacaa aataaccaat
    18421 caaagcaatc acaaacgtac tggctaccat aaaaaaccag ttggcttcag ggcctacgac
    18481 gtagtcggga tggatgattt gcgccgcctg ttgggtgatg cctgccaaga gcggatcgat
    18541 tgtgcctaag aacagattgg ccgaataacc gcccgaaacg ccggcgaaag ccgcagccag
    18601 accggcaagc ggatggcggc cgagggaatg aaagatgatg gcggacaaag ggattaggac
    18661 gacatagccc aattcagaag cggtattaga taaaatccct gtaaaaacaa ccataaaagt
    18721 agtgagtttg cgtggagatt ttgtgagcaa taagcgcatt aatgcggaaa tcaagcccga
    18781 tttttccgca atccccacgc ccaataaaga aaccaacacc gttcccaacg gcgcgaaacc
    18841 ggtgaaattt ttaacggtat gcgtcaggat tttgatcaaa ccgtcagcat cgagcaggct
    18901 gacaacgtga atcaaaccgt catcggcacg tcctttcgca ccaacagggc gcggatcggg
    18961 gacggatagt ccgaaatacg caccggcggc agaggcaatc agcaataaca caatgaaaat
    19021 aataaaaagc gtaaccgggt gcggcaacat attgcccagc cattcgactg tgcgtaaaaa
    19081 tcgtccgtcc cgttgcgtat cggtttgact catctgcttc tccttaaaaa aaatatattg
    19141 agtgcattaa atttttgaat gtaacatgaa gtgttttgta agcaaactaa aataatcgta
    19201 tatgtatata accgtaatag attaaaacag aaaatgccca catcgttatt ttcataaagg
    19261 cggtaatccg aaaacttgac gttaaagcct tatcaggaat gactggaact caaaaaaacg
    19321 gattcccgcc tgcgcgggaa tgacgggatt ttcggttttt gtttgcaaga atgccggaga
    19381 agaatgcagt ttacattttg aatgatattg ttattaattg taaataaata ttggaaggta
    19441 aatgatatga aaaatgaaat tcaaaaaatc atggacaaat ataatccatg gcatgaagat
    19501 gattttgagt cgtatgaaga cattgccaaa gatgtatcgc tgatgacaga taaaacgttc
    19561 attgaacatt atttgttaga agtttattca gaagaaaacg gacattttga ccaagagaat
    19621 atccatgcga tgatagggga aattaaaaat gcaatttagt gaatatgaga cctttgcaaa
    19681 aatagtctgt taacgaaatt tgacgcataa aaatgcgcca aaaaattttc
//
LOCUS       DAWITQ010000021        19726 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.021, whole genome shotgun sequence.
ACCESSION   DAWITQ010000021 DAWITQ010000000
VERSION     DAWITQ010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19726)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19726)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19726
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.021"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            133..369
                     /locus_tag="WIX18_000630"
     CDS             133..369
                     /locus_tag="WIX18_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237775.1"
                     /translation="MRILDIFKNPATGNVSHSKLWANVACAAGTFKFVMLPDPSAEIW
                     AVYLGIVGGYAVARSFVSVKRQEVENESRETAGE"
     gene            341..760
                     /locus_tag="WIX18_000631"
     CDS             341..760
                     /locus_tag="WIX18_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237776.1"
                     /translation="MNLVKLLANNWQPIAIIALVGTGLAVSHHQGYKAAFAKQQAVID
                     KMEHDKAQALLLSAQNYARELELARAEAKKYEVKAHAVGMALAKKQAEVSRLKTENKK
                     EIENVLTQDRKNAGGGCIDGFGHHGLQLYKRALGYGN"
     gene            657..962
                     /locus_tag="WIX18_000632"
     CDS             657..962
                     /locus_tag="WIX18_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237777.1"
                     /translation="MSLLKTVKMQAAVVLTALAITACSSTSAPSATEIKVVEKAVMPT
                     PPAALMVAPVRPNPPKDGKTATLLEHAAEFGGYVAELENQNQAWRDWAGNHSRKVGN"
     gene            complement(1007..1177)
                     /locus_tag="WIX18_000633"
     CDS             complement(1007..1177)
                     /locus_tag="WIX18_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YegP family protein"
                     /protein_id="HEZ5237778.1"
                     /translation="MYFEIYKDAKGEYRWRLKAANHEIIAQGEGYTSKQNCQHAVDLL
                     KSTTAATPVKEV"
     gene            1190..1408
                     /locus_tag="WIX18_000634"
     CDS             1190..1408
                     /locus_tag="WIX18_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237779.1"
                     /translation="MNEYTFSYRFNGKSWSLSIWADNPEEARAKFRAARENAHYDGEV
                     VAKVYTFVNISWVKKLYKRTKYLMGIKE"
     gene            1405..1743
                     /locus_tag="WIX18_000635"
     CDS             1405..1743
                     /locus_tag="WIX18_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237780.1"
                     /translation="MTYRELVERQLAVRHADLELGLSRAREQEPFVIHVSDLLDKAGI
                     EYAVRMDKDFQTTFHLEYPITNYDTFKRAVWQTLGAYYCVCNDGDGLEIASNRPDGYA
                     VRIVFGDVPV"
     gene            1755..2021
                     /locus_tag="WIX18_000636"
     CDS             1755..2021
                     /locus_tag="WIX18_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237781.1"
                     /translation="MDFEFGFRTLWPIATAAFWFWVNGISGRLKEADKRIDDLKEELH
                     AVKLSYHTKADAKADSTNIAAALERIENKLEKVNEKLDRKADKS"
     gene            2018..2215
                     /locus_tag="WIX18_000637"
     CDS             2018..2215
                     /locus_tag="WIX18_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237782.1"
                     /translation="MSDPILEALARIENKTDQTLKNQKEMQAEIAQIRQDTKRTAITF
                     GALGGGVITVGWELLKAKMGL"
     gene            2218..2724
                     /locus_tag="WIX18_000638"
     CDS             2218..2724
                     /locus_tag="WIX18_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1804 family protein"
                     /protein_id="HEZ5237783.1"
                     /translation="MAHPQEIREKLRRLYVSGEQTLETAALMCEIPQTTARAWKRADK
                     EKGDDWDKMRAAYTLAGGGIEDLSRAMLAGFMVQYNSTMTMLQDSSTEDLPPSDRAKL
                     LASLADAFTKTVSANARVMPETSKLATALELIEFLMAFVQEKHPKHLPAFVEVLEPFG
                     AEVEKKFG"
     gene            complement(2721..3233)
                     /locus_tag="WIX18_000639"
     CDS             complement(2721..3233)
                     /locus_tag="WIX18_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237784.1"
                     /translation="MTGFISNAFIGLKEAGSLLKGFNQLKTEAEVAQKTIELNQIIAG
                     IQTDLFEAQSSYTAAISRIDELEKELVAVKNWSTEKQRYQLYELAPGSFVYRLKTEMA
                     NSEPIHDICPQCYEQGVKSILQFNGYEGAFHKYSCSRCQTIILGERLKSDVEVFSVGG
                     SRYGRLIDGY"
     gene            3245..4867
                     /gene="terL"
                     /locus_tag="WIX18_000640"
     CDS             3245..4867
                     /gene="terL"
                     /locus_tag="WIX18_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HEZ5237785.1"
                     /translation="MKTKEFLKSLAELAASLRQVIEAEVDGFDASPKAVSARRAKVFD
                     PIGGYEYFVNTYFPHYIRSPEKSELHAFLFSRLPEIIRSPKGENEAVGAPRGEGKSTQ
                     VTQLFTLWCIVTGQKHYAVIVMDSIDQAYPMLEAIKAELEFNPRLKTDFPEVCGQGRV
                     WQAGTIVTANDVKVQVAGSGKKLRGLRHGPYRPDLTVLDDIENDEQVRNPEQRDKLNA
                     WLTKTVLPLGGVGQKYDVIYIGTILHYDSVLNRTLNNPFWRGVKFKAMKRWPDRMDLW
                     DRWEELFRNDGETVAEAFYQANKDEMERGAVTSWAARGVLALMKIRARDGHATFDSEY
                     QNDPVSGEDAPFAKSMKFWNDLPSDLVYFGALDPSLGKAGASRDPSAIVIGGYQRSMG
                     RLYVVEAQIKKRLPDLIIEDVICLHRQYRCKLWFVETVQFQEFLKDELVKRSAARGIP
                     VPARAVKPVSDKLLRIETLQPHMANGLILLNESQQTLIQQFRHFPKADHDDGPDAVHM
                     LWSGAVANCVPIEWQSPTDNDFGNEIKSKWSR"
     gene            4867..6435
                     /locus_tag="WIX18_000641"
     CDS             4867..6435
                     /locus_tag="WIX18_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 domain-containing protein"
                     /protein_id="HEZ5237786.1"
                     /translation="MAKKDNKTKIQKPEAALQTDAAQITATGRVIAEHPSNFITPQKM
                     RALFEDAESGDIRAQHELFADIEERDSDIAANMGTRKRALLTLNWRVAPPRNATPEEE
                     KLSDQAYEMMDSLPTLEDLIMDLMDAVGHGFSALEVEWVFSDGLYLPRNFIHRPQSWF
                     KWDKDDGLLLRTRENPEGEALWPLGWVVHTQKSRSVRQARNGLFRSLSWLYMFKHYAV
                     HDFAEFLELYGMPIRIGKYGAGATKEEKNTLLRAVEEIGHNAAGIMPEGMEIELHNAA
                     SGTTATSNPFLQMADWCEKSAARLILGQTLTSGADGKSSTNALGNIHNEVRRDLLVSD
                     AKQVAQTITSQIIGPFLQINYPHADPNRVPKFEFDTREPKDIAVFADAIPKLVDVGVQ
                     IPESWVRDKLVIPDVQEGEAVLVRQVPDNPVNRTTLAALSAHTVPSKATGRHQEILDG
                     ALDDALVEPDFNSQLNPMVRQAVAALNACNSYEEADAALNALYPNLDNAKLRTYMQQA
                     LFISDILGQDHARA"
     gene            6422..7717
                     /locus_tag="WIX18_000642"
     CDS             6422..7717
                     /locus_tag="WIX18_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HEZ5237787.1"
                     /translation="MPAPDLGFALSLPPKKAIEWLESKKVTAESYRNLTASEIAKVYT
                     IARMTDLDMLNDIKTSMVESAKSGQSFDDWRKGILNLLSNKGWLHPNGHNGKDIIDPA
                     TGEVFGSPRRLETIYRTNMQTAYNAGQYQGYMANIDARPYWMYDAVGDSRTRPAHSAI
                     DGLVYRYDDPFWATFYPPNGYNCRCSVIALSERDVERQGRIVGQSTADNLVETHKIYN
                     KKGDSYPTTAYKAPDGSLYTADKGFGYNAGRMNYRPDLDKYDRALAHQFAKAEMGGAD
                     FKTSFKQLEKEFYEVKQRLDIDGKPDKEQKIKIRNALSRQLKFAAGVLSKETQELAGM
                     TRATVWLSDDTLVKQVDSREGQNFDDSYYAFLPDMLQNPEHVIRDNRELIFTARYKGS
                     ALWAVLKYIKEVDEIYLQSYRISNDKEIAKFMAKKKVLK"
     gene            7827..8243
                     /locus_tag="WIX18_000643"
     CDS             7827..8243
                     /locus_tag="WIX18_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HEZ5237788.1"
                     /translation="MIDVKIDNIFVVLNQIERLGNGIENRYLLMRRLSETMHTAVKLN
                     FRYAGRPKWLGLKYRDGKPLSDSGRLKDSFSTLSDNDTALVGTNIVYAAIHNFGGMAG
                     RNRKVRIPQREFLTLTDDDKQALMDDVQDYFSGLIP"
     gene            8474..9535
                     /locus_tag="WIX18_000644"
     CDS             8474..9535
                     /locus_tag="WIX18_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237789.1"
                     /translation="MSKNAQKTLLAVCSFEVQPKDGRIQLLPYGEFRAVDGRPTDVPA
                     WYLTEENGHDVALLANSSRNQLVVDYEHQTLYKEKNGQPAPAAGWMRWLEFTPKGMFA
                     EVEWTDKAAAAIAAKEYRYISAVFSYDTKGYVSKIFHAALTNFPALDGMDEVLAAASA
                     QILKPETEQNPMKELLQQLFGLPDAGEEELKAALSALVEAKPEGAALSADVFAQLAEK
                     DSRIAALSAQNGTPDLTRYAPVSLVRDLQNQVAALTAEREADKGGELITAALSAGKLL
                     PAQKEWAEGVLKQPGGFAFLSGFIENAQPVAALAGSQTGGKAPDERVAALTAEEAAAA
                     KMLGMSGEEFVKIKESEGK"
     gene            9636..10106
                     /locus_tag="WIX18_000645"
     CDS             9636..10106
                     /locus_tag="WIX18_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237790.1"
                     /translation="MQPVAQAVRLLSTSSLLSVATALIEAHGEEMTAPDLIEVNRAMR
                     RRMQAEIAALRAVQTAAAESGGLTANAVYTEAYQTAESLRAAAGSLNALVAAAINQKP
                     PLIVRQAPIDGTIHQIAHEFYGDIARAAELVRLNPHIHHPAFIKRGTLVNSYAK"
     gene            10096..11241
                     /locus_tag="WIX18_000646"
     CDS             10096..11241
                     /locus_tag="WIX18_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEZ5237791.1"
                     /translation="MQNNSYGYAVSVRVGGKEHRHWERYDIDSDFLIPADSFDFVIGR
                     LGPEAAIPDLSGESCEVVIDGQIVMTGIIGSQRHGKSKGSRELSLSGRDLAGFLVDCS
                     APQLNVKGMTVLDAAKKLAAPWPQIKAVVLKAENNPALDKIDIEPGETVWQALTHIAN
                     SVGLHPWLEPDGTLVVGGADYSSPPVATLCWSRTDSRCNIERMDIEWDTDNRFSEVTF
                     LAQSHGRSGDSAKHDLKWVYKDPTMTLHRPKTVVVSDADNLAALQKQAKKQLADWRLE
                     GFTLTITVGGHKTRDGVLWQPGQRVHVIDDEHGIDAVFFLMGRRFMLSRMDGTQTELR
                     LKEDGIWTPDAYPKKAEAARKRKGKRKGVSHKGKKGGKKQAETAVFE"
     gene            11238..11906
                     /locus_tag="WIX18_000647"
     CDS             11238..11906
                     /locus_tag="WIX18_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HEZ5237792.1"
                     /translation="MSLSKLAKKTAQTAKNIGETLRTAFRGKITLVVSSEPIQRVQLS
                     GLADETLQDLEHLQEYGFASHPPDGSEAVVIPLGGNTSHGVIVCSQHGSYRIKNLKPG
                     ETAIFNHEGAKIVIKQGKIIEADCDVYRVNCKQYEVNAATDAKFNAPLVETSAVLTAQ
                     GQINGNGGMAVEGGDGATFSGDVNQTGGSFNTDGDVVAGNISLRQHPHTDSIGGKTLP
                     AEPA"
     gene            12007..12354
                     /locus_tag="WIX18_000648"
     CDS             12007..12354
                     /locus_tag="WIX18_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage GP46 family protein"
                     /protein_id="HEZ5237793.1"
                     /translation="MDKELNPSIGDYTGRTVDTLQNAVYIRLMTPLGSWWADKTLGSL
                     LHLLQREKDLQRVSLLAEQYADEALQPIVKSGRADKITVRAEQPHDGRLILHIRVDTA
                     AGGFDYRHEVPVI"
     gene            12368..13423
                     /locus_tag="WIX18_000649"
     CDS             12368..13423
                     /locus_tag="WIX18_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HEZ5237794.1"
                     /translation="MFETPTFEQIRERILRDTKSLWPDADISPDSDHYVHASRLASCA
                     EGQYAHQSWIVRQIFPDTADREYLERHASMRGLRRRNPTTASGTLTVSGIAQSMLSDG
                     LQVRIGQRFYRTTARAVIGSGGTAEIPAIADELGAAANVRDGEAQLMAAPAGVSTECR
                     LTVQGGTDRESDASLLARLLEIIRRPPAGGNRYDYKNWALSVDGVTSAYVYPLRRGLG
                     TVDIAITSADGVPSEETVRRVQAYIDEMRPVTAKNALVLKPTVTAVPVTVQVKLDGID
                     LDDAKRRIRTALKEYFDTLIPGDGLTVSQIEAAISNVDGVIDRRLTAPTANRAADTVN
                     RIEWFKAGAINVTEMPS"
     gene            13420..13980
                     /locus_tag="WIX18_000650"
     CDS             13420..13980
                     /locus_tag="WIX18_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmfQ family protein"
                     /protein_id="HEZ5237795.1"
                     /translation="MSYQDILRGLLPPVSYARNAPRVRAQAEIDGAALDAVAESAQSV
                     ADAVDPSSAGQMLADWERVLGLDGTGKNRQRRVLAVMAKLNETGGLSIPYFVRLAEAA
                     GYQIQIDEPQPFRAGVNRAGDRLAPQEIMWVWHVNVRGGNNRITRFRAGISAAGDRLT
                     DYSDAVIESLFNRLKPAHTAIRFTYR"
     gene            13991..15964
                     /locus_tag="WIX18_000651"
     CDS             13991..15964
                     /locus_tag="WIX18_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HEZ5237796.1"
                     /translation="MHPIETPDKTFHDGDGVSELGTILPAWWLNQVQSELLAVLTAAG
                     IQPDKSQPNQLLAALNRLAVVTTGDQTITGQKTFTAQTQFQSGIHLSANQTNWNGGHK
                     AYIGAAADNAHIVFGDNTLRLHGANNRISYNNHDIFHKANKPRFAEDIKGKPNTLSGY
                     GIGNFKVETFRGDLNTLKTDGIYSLPTAVGSSNLPVENTACHIQVIAGTQPGWCRQLG
                     YPAYTSDVYERHQTSSANDNWSAWKKLNSDGIPAGAIVSFPKAVQNPAGYLKANGTTF
                     AQNTFPDLYRALGNSNRLPDLSRTDIGITAWFPSDQIPTGWLAFDDIRTRVTETAYPE
                     LYRLLTGKYGSIQNVPQAEDRFIRNAGNSLAVGTKQEDEIKRHVHKVFSHWTNHTDTA
                     AVGYEDHNERQRSALVSTWTDGDLNDNGFLTPRSDSKMATGGDENRPKALVLKLCIKA
                     ADTLGEAVFWIKSHGETINAGALDAGTLAQGLQDKADRDHTHTAAQIQGLDEKISTAV
                     AAQFTRQTIGGVDIVRFPDGTMIQTGSYRFTRSGGPIENEVVFPVAFADGNVKCFVSE
                     RHSGRVTGDRRQHNWLFIRAKNHAAAIITNWYEGSCDWMAIGKAASGNAASSPIGPEI
                     PETNEEPQRESGRTSTGPRNRRRRDGLLEALQD"
     gene            complement(16647..16949)
                     /locus_tag="WIX18_000652"
     CDS             complement(16647..16949)
                     /locus_tag="WIX18_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HEZ5237797.1"
                     /translation="MQRQSLTNADGEVRELAAEDFALARPIVEALPEDLAQVLFSHQK
                     QLEEKGVMQKRNTGKTPKQLVTIRLSADVVEKFRAGGKGWQTRINEVLRQYVAQLK"
     gene            complement(16921..17208)
                     /locus_tag="WIX18_000653"
     CDS             complement(16921..17208)
                     /locus_tag="WIX18_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HEZ5237798.1"
                     /translation="MKIEFDSEKNQRNIEERNLPFESVGQIRWTTAVIVPDVCFDYPE
                     PRYVAAAYLGDTQRLHIVCFTPIKDGIRVISFRKANKREVKKYATSILNKR"
     gene            17288..17893
                     /locus_tag="WIX18_000654"
     CDS             17288..17893
                     /locus_tag="WIX18_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237799.1"
                     /translation="MTIYFKNGFYDDTLGSIPEGAVAVRAEEYAALLAGQAQGGQIAA
                     DSDGRPVLTPPRPSEYHEWDGKKWEIGEAAAAARFAEQKTATAFRLAAKADELKNSLL
                     AGYPQVEIDSFYRQEKEALARQADNNAPTPMLAQIAAARGVELDVLIEKVVEKSARLA
                     VAAGAIIGKRQQLEDKLNTIETAPGLDALEKEIEEWTLNIG"
     gene            17872..18168
                     /locus_tag="WIX18_000655"
     CDS             17872..18168
                     /locus_tag="WIX18_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase UvrD"
                     /protein_id="HEZ5237800.1"
                     /translation="MDAKHRLKKYVYHLLVAIDQLFNALTGGAADETLSSRTYRGARL
                     AQKPKTRWKVLYTLINGVFFDRQHCRQAYISELKGRQHDARFNQSRAAGEKGTR"
     gene            18165..18374
                     /locus_tag="WIX18_000656"
     CDS             18165..18374
                     /locus_tag="WIX18_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237801.1"
                     /translation="MNYFGMVEFLRLMAMVRPPFVFFSGTRSELPTYLDLVAELRLTG
                     WERFAGSQTLTVSSTSTAIQATTTT"
     gene            complement(18484..19626)
                     /locus_tag="WIX18_000657"
     CDS             complement(18484..19626)
                     /locus_tag="WIX18_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HEZ5237802.1"
                     /translation="MQKWQTELYSTPLWLCLTPKSTVKVLLLITVMVTLLLTEVRLNV
                     LSTFMSKGLYDSMQDLNASAFWMFAAMNAGVVLIRAFNNVVNDFLDQGLAIKWSEQLN
                     EVLTTRWLADKNYYRLQMRRHAPDNIDQRIQQDAQDFIASTIEFVRGMVNSVVTSLEF
                     AVVLWGLAGILTVFGFDIPRGIVWLVFIFVILATFIAMWIGNPLIRYNYENEKLNGDY
                     RYSLIRVRDHAESVAFYNGEQHEHGRLSDRFKAIIRNRWRIARQSVCLSGFNDMFTNG
                     IKLFPIILQAPRLFAGQIKIGDIQQTVQAFARLQNALSFFRMFYNKFTAYRARLERLY
                     GFLLSTEEQHSARQPEISEVSDGIALECKAAAAFARIGGSFCTAEA"
BASE COUNT         4962 a         5262 c         5536 g         3966 t
ORIGIN      
        1 gctgtggtcg agcaaaagcc gtgaggcaag cgaacgggct gatttggcgg cgtttgaatt
       61 tgcggagggc gaactggcca attatcggga aatgctgaaa cggcacctgc aaaccaaaag
      121 tgtggaatag caatgcgtat tttggatatt tttaaaaacc cggcgacagg caatgtgtcg
      181 cactcgaagc tgtgggcaaa cgtcgcctgc gcggcgggga cgtttaaatt tgtgatgttg
      241 cccgacccgt cggcggagat ttgggcggtg tatttgggca ttgtcggcgg ctatgccgtg
      301 gcgcgctcgt ttgtcagcgt caaacgtcag gaggtcgaga atgaatctcg tgaaactgct
      361 ggcgaataac tggcagccga ttgccatcat cgcgcttgtc ggcacgggtt tggcggtgtc
      421 acaccatcaa ggctacaagg cagcctttgc gaagcagcag gcggtcatcg acaagatgga
      481 gcacgataag gcgcaagccc tgctgttgtc ggctcaaaac tatgcgcgcg aactggaact
      541 ggcacgcgcg gaagcgaaaa aatatgaagt caaggcgcac gctgtcggca tggctttggc
      601 gaaaaaacag gcggaagtca gccgtctgaa aacggaaaat aaaaaggaaa tcgaaaatgt
      661 ccttactcaa gaccgtaaaa atgcaggcgg cggttgtatt gacggctttg gccatcacgg
      721 cttgcagctc tacaagcgcg ccctcggcta cggaaattaa ggttgtcgaa aaggcggtca
      781 tgccgacacc gcctgccgca ttgatggtcg cgccggtacg cccaaatccg ccgaaagacg
      841 gcaagacggc cacgctgttg gaacacgccg ccgagtttgg cggctatgtg gcggagttgg
      901 aaaatcaaaa tcaggcttgg cgcgactggg cgggcaatca ctcccgcaaa gtcggaaact
      961 gacaaaaaag cccgcgtagg gcgcgggctg agggtgaaag cggattttat acctctttta
     1021 caggggtagc ggcggtagtg cttttcagca aatcgactgc gtgctgacag ttttgcttgc
     1081 tggtgtagcc ttcgccctga gcgatgattt catggttggc tgctttcaaa cgccaacggt
     1141 attcgccttt tgcgtcttta tagatttcaa aatacataag gtttctccta tgaatgagta
     1201 cacgttttct taccgcttta acggcaagtc ctggtcattg agcatttggg cggacaaccc
     1261 tgaagaagcc agggcgaaat ttcgggctgc acgagaaaat gcgcactatg acggcgaagt
     1321 tgtagcaaag gtttatacat ttgtaaatat ttcgtgggtt aagaaattgt acaagcggac
     1381 aaaatattta atgggtatca aagaatgacc taccgtgaat tagttgaacg tcagttggct
     1441 gtgcgccatg ccgatttgga attgggctta agccgcgcac gcgagcaaga gccgtttgtc
     1501 attcatgttt ccgatctgtt ggataaggca ggcattgagt acgcggtacg catggataag
     1561 gattttcaga cgacgtttca ccttgaatat ccaattacga actatgacac ctttaaacgt
     1621 gcggtttggc aaactttggg ggcgtattac tgtgtttgta atgatggtga tggactggag
     1681 attgccagca atcgccctga cggttacgcc gtccgtatcg tattcggcga tgtgccggtt
     1741 taaaggggtt ttaaatggac tttgaatttg gtttcagaac cctgtggccg attgcgacgg
     1801 cggcattttg gttttgggtc aacggcattt caggccgcct gaaagaggcg gacaagcgta
     1861 tcgacgacct taaagaggag ttgcacgcgg tcaagctctc ttatcacacc aaggcggacg
     1921 ccaaggcaga cagcactaat attgcggcgg ccttggagcg aattgaaaac aagttagaaa
     1981 aagtaaacga aaaactggac aggaaagcag acaaatcatg agcgacccga ttttggaagc
     2041 cttggcgcgt attgaaaaca agactgatca aacgctgaaa aatcagaaag aaatgcaggc
     2101 ggaaattgcg caaatccgcc aagacacgaa acgcacggcc attacattcg gcgcactggg
     2161 cggcggcgtg attacggtcg gctgggaatt gcttaaagcg aaaatgggac tgtaattatg
     2221 gctcacccgc aagaaatccg tgaaaagtta cgtcggctct atgtgagcgg cgagcaaact
     2281 ttggaaacgg cggccttgat gtgcgaaatc ccgcagacca ctgcgcgtgc gtggaaacgt
     2341 gcggataagg aaaaaggcga cgactgggat aagatgcgcg ccgcctacac tttggccggc
     2401 ggcggtattg aggacttgag ccgtgcgatg ttggccggtt ttatggtgca gtacaacagc
     2461 acgatgacga tgctgcagga ttcgagtacc gaagatttgc ccccgtccga ccgcgccaag
     2521 ctgttggcca gcctggccga tgcgtttacg aaaaccgtat cggccaatgc gcgtgtgatg
     2581 ccggaaacgt caaaactggc gacggctttg gaattgattg agttcttgat ggcgtttgtg
     2641 caagaaaaac atcccaaaca tttgcctgcc tttgtggagg tattggagcc gtttggggcg
     2701 gaagtggaga agaagtttgg ttaatagccg tctatcaatc tcccataacg tgatcctcct
     2761 actgaaaata cttcaacatc tgactttaaa cgctctccca atattatggt ttggcaacgg
     2821 gaacaggaat atttatgaaa agcaccttca tacccattga attgaagaat cgatttgaca
     2881 ccctgctcgt aacattgggg acaaatatca tgaattggct cgctgttcgc catctctgtt
     2941 ttcaatcgat agacgaaaga accaggagca agttcataca attggtagcg ttgcttctct
     3001 gtagaccaat tttttactgc caccagttct ttttccaact catctatacg gctaattgcc
     3061 gccgtataag aagattgggc ttcaaataaa tcagtttgaa taccagcaat gatttgatta
     3121 agttcgatgg ttttttgcgc tacctctgcc tctgttttga gctggttaaa cccttttaaa
     3181 agtgatcctg cttcttttag gcctataaat gcgttagaaa tgaatccagt cattataaat
     3241 actcatgaaa acaaaagaat tcctcaaatc ccttgccgaa ctggccgcca gtttgcgcca
     3301 agtcatcgaa gcggaagtgg acggcttcga tgcgtcgccc aaggctgttt ctgcacgccg
     3361 tgccaaggtg tttgacccga taggcggtta cgaatatttc gtcaacacct acttccccca
     3421 ttatatccgc tcgcctgaga aatccgaact gcatgcgttt ttattcagcc gtctgccgga
     3481 gattatccgc tcccccaaag gggaaaatga ggcggtgggc gcaccgcgtg gcgagggtaa
     3541 atcgacgcag gttacccagt tgtttacgct gtggtgtatt gtgaccggcc aaaaacatta
     3601 tgccgttatt gtgatggaca gcatagacca ggcatacccg atgctcgaag ccatcaaggc
     3661 ggaattggaa tttaatccgc gcctgaaaac cgactttcct gaagtctgcg ggcaaggccg
     3721 tgtatggcag gccggtacga ttgtgacggc caatgacgtt aaggtgcaag tggccggtag
     3781 cggtaaaaag ctgcgcggtt tgcgtcacgg cccttaccgt cctgacttaa ctgttttgga
     3841 cgatattgag aatgacgaac aagtccgcaa ccccgaacag cgcgacaagc tcaatgcgtg
     3901 gctgactaaa acggtattgc ctttgggcgg ggtcggtcag aaatacgatg tgatttatat
     3961 cggcacgatt ttgcattacg acagcgtact taaccgcact ttgaataacc cgttttggcg
     4021 gggtgttaag tttaaggcga tgaaacgctg gcccgaccgc atggatttgt gggacaggtg
     4081 ggaggaactt ttccgaaacg acggcgagac ggtggccgag gcgttttatc aggcaaacaa
     4141 agacgagatg gagcgcggcg cagtcacttc ttgggcggcg cgtggcgtac tcgcgctgat
     4201 gaaaatccgt gcgcgtgacg gccatgcgac gtttgattcg gaatatcaga atgatccggt
     4261 cagtggcgaa gatgcgccgt ttgccaagtc gatgaagttt tggaacgacc tgccgtccga
     4321 tttggtgtat ttcggtgcgc tcgacccgtc gctgggtaaa gcgggggcga gccgtgaccc
     4381 gtcggcaatc gtcatcggcg gctatcagcg gtcaatgggc aggctttatg tcgtggaggc
     4441 gcaaatcaaa aaacgtctgc ccgacctgat tatcgaagac gttatctgcc tgcaccgtca
     4501 atatcgttgc aaactgtggt ttgttgagac ggtgcagttt caggagtttt taaaagacga
     4561 gctggtcaag cgcagcgcgg cgcgtggaat acctgtcccg gcgcgggcgg tcaagccggt
     4621 atcggacaaa ctcttgcgga ttgagacttt gcagcctcac atggcaaacg gtttgattct
     4681 gttgaatgag agccaacaga cgctgataca gcagttccgc cattttccaa aggctgatca
     4741 tgatgatggt cctgatgccg tgcatatgct ctggtcgggg gcggtggcca attgtgtgcc
     4801 gatagaatgg caaagcccta ccgataacga ttttggtaac gagataaaaa gtaaatggag
     4861 ccgataatgg caaaaaagga caataaaact aaaatccaaa agcccgaggc tgcattgcag
     4921 acggatgcgg ctcaaattac ggcgaccggt cgggttatcg ccgagcatcc gtccaatttt
     4981 attacgccgc aaaagatgcg cgccctcttc gaggacgcag aaagcggcga catccgcgcc
     5041 caacacgagc ttttcgcgga cattgaggag cgcgacagcg acatcgcggc aaatatgggg
     5101 acgcgcaaac gcgcgctgct gacgctcaac tggcgcgtcg ccccgccgcg aaatgcgacg
     5161 cccgaagaag aaaagctgtc cgaccaagcc tacgaaatga tggacagcct gcctaccctc
     5221 gaagacctga ttatggattt gatggacgcg gtagggcacg gattttctgc gttggaggtc
     5281 gagtgggtat tttcagacgg cctttacctg ccccgaaact ttatccaccg cccgcaaagc
     5341 tggttcaaat gggacaaaga cgacgggctg ctgctgcgta cccgcgaaaa tccggaaggc
     5401 gaagcgttgt ggccgctggg ctgggtcgtt catacccaaa aatcgcgcag cgtccggcag
     5461 gcgcgcaacg ggcttttccg ctcgctttcc tggctgtata tgttcaaaca ctacgccgtc
     5521 cacgattttg ccgagttttt ggagctgtac ggcatgccca tccgtatcgg caaatacggc
     5581 gcgggcgcaa ccaaagagga aaaaaacacc ctgcttcgag cggtggagga aatcggtcac
     5641 aacgcggcag gcatcatgcc agaaggtatg gaaatcgagc tgcacaacgc tgcaagcggt
     5701 acgacggcaa ccagcaatcc gtttttgcag atggccgatt ggtgcgaaaa atcggcggcg
     5761 cggctgattt tggggcaaac gctgaccagc ggtgcggacg gaaaatccag caccaacgcg
     5821 ctgggcaata tccacaacga ggtacgccgc gatttgctgg tgtcggacgc aaaacaggtg
     5881 gcgcaaacca tcacaagcca aatcatcgga ccgttcctgc aaatcaacta tccccatgcc
     5941 gacccaaacc gcgtgccgaa atttgaattt gacacgcgcg agccgaaaga catcgcggtc
     6001 tttgccgacg ctatcccgaa actggtggat gtcggcgtac aaatccccga aagctgggtg
     6061 cgcgacaaac tggtcattcc agatgtgcag gagggtgagg ctgtgttggt gcggcaggta
     6121 ccggacaatc cggtaaacag aactacattg gcggctttat ccgcccacac cgtaccatct
     6181 aaggctacgg gcaggcatca ggaaatattg gacggcgcgt tggatgacgc gctggttgag
     6241 cccgatttca attctcagct caacccgatg gtgcgtcagg cggttgccgc acttaatgct
     6301 tgcaacagct acgaggaggc agatgccgca ctgaatgcgc tttatccgaa tttggacaac
     6361 gcgaaactgc gtacctatat gcagcaggcc ttgtttatca gcgatatttt gggacaagac
     6421 catgcccgcg cctgatttgg gatttgcctt aagtctgccg ccaaaaaagg caatcgagtg
     6481 gctggaaagt aaaaaggtta cggcggagag ctaccgcaat ctgacagcct ccgaaattgc
     6541 caaagtctat acgattgccc gcatgaccga cttggatatg ctcaacgaca tcaaaacttc
     6601 gatggttgaa tcggcaaaaa gtggacagtc gtttgacgat tggcgaaaag gtatcttgaa
     6661 tctgctcagc aacaagggct ggctgcatcc gaacgggcat aacggtaagg atatcatcga
     6721 cccagccacc ggcgaggtat tcggttcgcc gcggaggttg gagacgattt accgtaccaa
     6781 catgcaaact gcctacaacg ccggtcaata tcaaggatat atggcaaata ttgatgcacg
     6841 accttattgg atgtatgacg cggtaggcga cagccgcacc cgtccggcgc attcggcaat
     6901 agacgggctg gtgtaccgct acgacgaccc gttttgggca acgttttacc cgcccaacgg
     6961 ctacaactgc cgctgctcgg tcatcgcgct gtcggagcgg gatgtggaac gccaggggcg
     7021 gattgtcggg caaagcacgg cggataatct ggtcgagacc cataaaatct ataacaaaaa
     7081 aggcgacagc tacccgacga ctgcctacaa ggccccggac ggcagcctct acacggctga
     7141 caaaggcttc ggctacaacg ccgggcgaat gaactaccgc cccgatttag acaagtacga
     7201 ccgcgcgctg gcgcatcaat ttgccaaagc ggaaatgggt ggtgcagatt ttaaaaccag
     7261 ctttaaacag cttgaaaaag agttttatga agtcaagcaa cgtttggata ttgatggcaa
     7321 gcccgataaa gagcagaaaa tcaaaatccg aaatgcgcta tcaagacagc ttaaatttgc
     7381 tgcgggtgta ttgagcaagg aaacgcaaga attggcaggt atgacacgag cgacggtgtg
     7441 gctgtctgat gatacgttgg ttaaacaggt agacagccgt gaggggcaga atttcgatga
     7501 ctcctactat gcttttttgc cggatatgct gcaaaaccct gaacatgtca tccgcgacaa
     7561 tcgtgaattg attttcacag ctcgctataa aggctcggca ttgtgggcag ttttaaaata
     7621 tattaaggag gtggatgaga tttatctaca gtcgtaccga atcagcaacg acaaagagat
     7681 tgccaaattt atggcgaaga agaaagtatt gaaatagacg ttgggcaagg ctcgaattca
     7741 cttgcacacg ctctcgtaca ccctaaaggg caggctgcgg tatcgagatt atcaccgctt
     7801 ttccaacgcc tataaggaat cataccatga ttgatgtcaa aatagacaat atctttgtcg
     7861 tcctaaacca aatcgagcgg cttggcaacg ggatcgaaaa ccgctacctg ctgatgcgcc
     7921 gactgtccga aaccatgcac acggcggtca agctcaattt ccgctacgca ggccgtccga
     7981 aatggttggg gctaaaatac cgcgacggca agccgctttc ggattcgggt cgtctgaaag
     8041 acagtttttc cacactgtca gacaacgata cagcccttgt cggtacgaat atcgtctatg
     8101 ccgccatcca caacttcggc ggtatggcgg ggcgcaaccg caaagttcgg attccgcaac
     8161 gggaattttt gacgctgacg gacgacgaca aacaggcttt gatggacgat gtgcaggatt
     8221 atttttcggg tctgataccg tgaatttata aaaccctcaa aaacgcgctt tttagcgcgt
     8281 ttttttatgc gggtaataca aacccctgcc caagatataa aaatcaatcc tagacgcttc
     8341 taaaaagccc ctgaaaacga ttaattgtgt atcgcgcgga caggttttaa aaaaatggcg
     8401 ggagggtttg aagcacgcct actctttgtt gttttttcaa ataggcaaaa tgaccgtatt
     8461 gagagaggta cacatgtcca aaaatgcaca aaaaacccta cttgccgtgt gcagtttcga
     8521 ggtgcagcca aaagacgggc gaatccaact gctgccatat ggcgaatttc gcgcagtaga
     8581 cggtcgtccg actgatgtcc ctgcgtggta tctgaccgaa gaaaacggtc atgatgtcgc
     8641 gttgttggcc aacagctcgc gcaatcagtt ggttgtcgat tatgaacacc agacgctcta
     8701 caaagagaaa aacggacaac ctgcacctgc cgccggttgg atgcgttggc tggagttcac
     8761 gcctaaaggc atgtttgccg aagtggagtg gacggacaag gcggctgcgg caattgccgc
     8821 aaaagagtat cgctacatct ctgctgtgtt ttcctatgac acaaagggat atgtaagcaa
     8881 aatttttcac gcagcgctga caaatttccc cgcgttggac ggtatggacg aggtgctggc
     8941 ggcagcgtcg gcgcaaattt taaaaccgga aacggagcaa aaccctatga aagagttgtt
     9001 acagcaactg ttcggtctgc ctgatgcggg cgaagaagaa ctgaaggcgg cattgtccgc
     9061 gctcgtggaa gccaagccgg aaggtgcggc tttgtccgcc gatgtattcg cgcagctggc
     9121 ggaaaaagac agccgcattg cggctttgtc ggcgcaaaac ggcacgcccg acctgacgcg
     9181 atacgcgccg gtgtcgctgg tgcgcgacct gcaaaaccaa gttgccgccc tgaccgccga
     9241 gcgcgaagcc gacaaaggcg gcgaactgat taccgccgca ctgtctgctg gcaagctgct
     9301 gcccgcacaa aaagaatggg cggaaggcgt gctgaaacag ccgggtggct ttgccttttt
     9361 gagcggcttt atcgaaaacg cccagccggt cgctgcactg gcaggctcgc aaacgggcgg
     9421 caaagcaccc gacgaacgcg tcgccgcact gactgcggaa gaggcagccg cagcaaaaat
     9481 gctgggcatg tccggcgaag aatttgtaaa aatcaaagaa agcgaaggta agtaatggac
     9541 aaatcagcga ttttgaccgc aatcacggca gcattccgca aagaatttca aacgggggcc
     9601 tgcaaaaccg cctgaaccgt ttaaccgcca aataggtgca gccggtagcg caggcagtgc
     9661 gcctgttatc cacgtcatcg ctgttgtcgg tggcaacggc attaatcgag gcgcatggcg
     9721 aagagatgac cgcgcccgat ttgattgagg ttaaccgcgc catgcgccgc cgtatgcagg
     9781 ccgagattgc cgccttgcgg gcggtgcaga cggctgctgc cgagtctggt gggctgacgg
     9841 ccaacgccgt gtataccgag gcttaccaaa cggcagaatc cctgcgcgcg gcggcaggca
     9901 gtctgaatgc gttggttgcg gcggccatca accaaaagcc gccgctgatt gtgcgccaag
     9961 ccccaatcga cggtacgata caccaaatcg cccacgagtt ttacggcgat atagcccgcg
    10021 cagcagagct ggtgcgactc aatccccata tccaccaccc cgcgtttatc aagcgcggca
    10081 ctttggtcaa cagctatgca aaataattca tacggctatg ccgtgtcggt gcgcgtgggc
    10141 ggtaaagagc accgccactg ggagcgctac gacatcgaca gcgacttttt aatccctgcc
    10201 gacagcttcg attttgtcat cggcaggttg gggccggagg cggccatacc cgatttaagc
    10261 ggagagagct gcgaggtagt gatagacggg caaatcgtga tgacgggcat catcggcagc
    10321 cagcgccacg gcaaaagcaa gggcagccgc gagttgagct tgagcgggcg tgatttggcc
    10381 ggttttttgg tggattgctc cgcgccgcag ctcaatgtaa agggcatgac ggtattggat
    10441 gcagccaaaa agctggccgc gccgtggccg cagattaaag cggtggtgct taaggccgaa
    10501 aacaaccccg ctttggacaa aatcgacatc gagccgggcg aaactgtatg gcaggcatta
    10561 acccatattg ccaactcggt cgggctgcat ccgtggctgg agccggacgg cacgttggtg
    10621 gtgggcggtg cggattacag cagcccgccg gtggcgacat tgtgttggag ccgcaccgac
    10681 agccgctgca atatcgagcg catggacatt gagtgggata ccgacaaccg cttttccgag
    10741 gttacttttt tggcgcaatc gcacggccgc agcggcgaca gcgccaaaca cgatttaaag
    10801 tgggtgtaca aagacccgac gatgacgctg caccgcccta aaacggtggt ggtgtccgat
    10861 gccgacaatt tggccgcatt gcaaaagcag gctaaaaagc agctggccga ctggcggctg
    10921 gagggattta cactcacgat aaccgtgggc ggccataaaa cccgcgacgg cgtattgtgg
    10981 caacctggcc agcgtgtgca tgtgatcgac gacgagcacg gtatcgatgc ggtgtttttt
    11041 ctgatggggc ggcggtttat gctatcccgc atggatggca cgcaaaccga gctgcggctc
    11101 aaagaggacg gtatttggac acccgacgct taccccaaaa aggccgaggc ggcgcgcaag
    11161 cgcaaaggca aacgcaaagg cgtgagccat aagggcaaaa aaggcggcaa aaaacaagca
    11221 gaaacggcgg tgtttgaatg agtttgagta aattggcgaa aaaaacggca caaactgcta
    11281 aaaatatcgg cgaaaccctg cgcacggcct ttcggggaaa aatcacgctg gtggtgtcgt
    11341 ccgagccgat acagcgcgtg cagttgagcg gcttggccga cgaaaccctg caagaccttg
    11401 aacatttgca ggaatacggc tttgccagcc atccgcccga cggcagcgaa gcggtagtga
    11461 taccgctggg cggcaatact tcgcacggtg tgattgtgtg cagccagcac ggcagctacc
    11521 gcatcaaaaa ccttaagccc ggcgagacgg cgatttttaa tcatgagggt gcaaaaatcg
    11581 tgattaagca aggcaaaatc attgaggccg attgcgacgt gtaccgggtt aactgcaaac
    11641 aatacgaggt taatgcggcc acggatgcca aatttaacgc tccgttggtg gagaccagtg
    11701 cagtgttgac ggcgcaaggc caaatcaacg gcaacggcgg catggccgtc gagggcggcg
    11761 acggagccac ctttagcggc gatgttaacc aaacgggcgg cagctttaac accgacggcg
    11821 acgtggtggc cggcaatata tcgttgcgcc agcacccgca taccgacagc atcggcggca
    11881 aaaccttacc ggcggaaccg gcatagacaa gcagaccttt ggcagccttc gggctgcttt
    11941 ttttgtgcgt gtgggattga agcccgtgta ctccgtgagg ccgtctgaaa acggcaaaat
    12001 gccaacatgg acaaagagct aaaccccagc atcggcgact ataccggccg caccgtcgat
    12061 acgctgcaaa atgccgtgta tatccgcttg atgacaccgt tgggcagctg gtgggcggat
    12121 aaaacgctcg gctcgctgct gcatttgttg cagcgcgaaa aagacctgca acgggtcagc
    12181 ctgttggccg agcaatatgc cgatgaggca ctgcaaccga ttgttaagag cgggcgtgcc
    12241 gacaagatta ccgtgcgcgc agagcagccg cacgacggcc gcctgatcct gcatatccgg
    12301 gtggatacgg cggcgggcgg gtttgattac cgccacgaag tgcccgtgat ttaaagaggt
    12361 tttaaacgtg tttgaaacgc cgacatttga gcaaatccgc gagcgtatcc tgcgcgatac
    12421 caaaagcctg tggccggatg ccgatatcag ccccgacagc gaccattatg tgcacgccag
    12481 ccgtttggcc agctgcgccg aagggcaata tgcgcatcaa agctggattg tgcggcagat
    12541 tttccctgat accgccgacc gcgagtattt ggagcggcat gcctccatgc gcggcttgcg
    12601 ccgccgcaat cctaccacgg ccagcggcac gctgaccgta agcggtattg cgcaatccat
    12661 gctttcagac ggcctgcaag tgcgtatcgg ccagcgtttt taccgcacta ccgcccgcgc
    12721 cgttatcggc agcggcggca cggcggaaat accggcaatc gccgacgagc tgggcgcggc
    12781 cgccaatgtg cgcgacggcg aggcgcaact gatggccgcc cccgccggtg tgtccaccga
    12841 atgccgcctt accgtacaag gcggcaccga ccgagaaagc gatgcctcac tgctggcgcg
    12901 tctgttggaa atcatccgcc gaccgcccgc aggcggcaac cgttacgact ataaaaactg
    12961 ggcgttgagt gttgacggcg taaccagcgc atatgtttat ccgctgcgcc gcggcttggg
    13021 tacggtggat attgccatta cctccgccga cggtgtgccg tcggaagaaa ctgtgcgccg
    13081 cgtacaggct tatatcgacg agatgcgccc ggtaacggca aaaaatgcgc tggtactcaa
    13141 gccaaccgta acggcggtgc ctgttaccgt gcaagtcaag ctcgacggca tcgacttgga
    13201 cgatgccaag cgccgcatac ggacggctct aaaagaatat ttcgacaccc tgatccccgg
    13261 cgacggtctg actgtgtcgc aaatcgaggc ggctatcagc aatgtggatg gtgtgatcga
    13321 ccgccgtctg actgcgccga cggccaaccg tgccgccgat acggttaacc gcatcgagtg
    13381 gtttaaagcg ggcgcgatta atgtaacgga gatgccgtca tgagctatca agacatcttg
    13441 cggggtctgt tgccccccgt gtcgtatgcc cgcaatgccc cgcgtgtgcg ggcgcaggca
    13501 gaaatagacg gcgcagcgct ggatgcggtg gcggaatcgg ctcaaagcgt tgccgatgcc
    13561 gtcgacccga gcagcgccgg ccaaatgctg gccgattggg agcgcgtatt aggtttggac
    13621 ggtacgggca aaaaccgcca gcgccgtgtg ttggccgtca tggccaagct aaacgaaaca
    13681 ggcggcttga gtattcctta ttttgtgcgt ttggccgagg cggcgggcta tcaaatccaa
    13741 atcgacgaac cgcagccgtt ccgcgccggt gtaaaccgcg ccggcgaccg tcttgcgccg
    13801 caggaaatca tgtgggtgtg gcacgttaac gtgcgcggcg gcaacaaccg cattacccga
    13861 ttccgcgccg gtatctcggc ggcgggcgac aggctgaccg attacagcga tgccgtgatc
    13921 gagagcctgt tcaaccgcct caagcccgcc cacaccgcta tccgatttac ctaccgataa
    13981 ggactaaacc atgcacccca tcgaaacccc cgacaagacc ttccacgacg gcgacggcgt
    14041 gtccgaattg ggcaccatcc tgcccgcgtg gtggctcaac caagtgcaat ccgagctgct
    14101 ggccgtgctg actgcggccg gtatccagcc ggataagtcg cagcctaatc aattactggc
    14161 agcactaaat aggctggctg tagttaccac cggcgaccaa accatcaccg gccaaaaaac
    14221 ctttactgcc caaacccaat tccaaagcgg catccattta tccgccaacc agacgaactg
    14281 gaacggcggc cacaaagcct acatcggcgc ggctgccgac aacgcccaca tcgtcttcgg
    14341 cgacaacacc ctccgcctgc acggcgcaaa caaccgcatt tcctacaaca accacgacat
    14401 cttccacaaa gccaacaaac cgcgttttgc cgaagacatc aaaggcaaac cgaacacact
    14461 gtccggatac ggcatcggca atttcaaagt cgaaacattc cggggcgatt tgaacaccct
    14521 caaaacagac ggcatctatt ccctgccgac ggcggtcggc agctccaacc tgcccgttga
    14581 aaacaccgcc tgccatatcc aagtcatcgc cggaacgcaa cccggctggt gcaggcagtt
    14641 gggttatccc gcctacacgt ccgacgtgta cgaacgccac caaacgagca gcgcaaacga
    14701 caactggtcc gcatggaaaa aactcaattc ggacggcatc cccgccggcg cgatcgtatc
    14761 ctttcccaaa gccgtacaaa accccgcagg ctatctcaaa gccaacggca cgacctttgc
    14821 gcaaaacacc ttccccgacc tctaccgcgc cttgggcaac agcaaccgcc tgcccgattt
    14881 gagccgtacc gacatcggca tcaccgcgtg gtttccgtcc gaccaaatcc cgaccggctg
    14941 gctggcgttt gacgacatcc gcacgcgcgt aaccgaaacc gcttatcccg agctgtaccg
    15001 tctgctgacc ggaaaatacg gcagcatcca aaacgtcccg caggcggaag accgctttat
    15061 ccgcaacgca ggcaacagct tggcagtcgg aacgaagcag gaagacgaaa tcaaacggca
    15121 cgtccacaaa gtattttcac actggacaaa ccacacagac acggcagccg tcggttacga
    15181 agaccacaac gaaaggcaga gaagcgcgct cgtatcgact tggacggacg gcgatttaaa
    15241 cgacaacggc tttttaaccc cgcgctcgga cagcaaaatg gcaacgggcg gcgacgaaaa
    15301 ccgccccaaa gccctggttt taaaactgtg catcaaagcc gccgacacct tgggcgaagc
    15361 cgtgttttgg ataaagtccc acggcgaaac catcaacgca ggcgcgctgg acgcgggcac
    15421 gctggcgcaa ggtttgcaag acaaagccga ccgcgaccac acccacaccg ccgcccaaat
    15481 ccaagggctg gacgaaaaaa tcagcaccgc cgttgccgcg caattcacac gccaaaccat
    15541 cggcggcgtg gatattgtca gattccccga cggcacaatg atacagaccg gcagttacag
    15601 gtttacaaga agcggcggcc ccatcgaaaa cgaagtcgtc ttccccgtcg cctttgccga
    15661 cggcaacgtc aaatgcttcg tatccgaacg ccattcggga cgcgttaccg gcgatcgaag
    15721 gcaacacaac tggctgttta tccgcgcaaa aaaccacgcc gccgccatta ttaccaactg
    15781 gtacgaaggc agttgcgact ggatggccat cggcaaagcc gcctcgggaa acgccgccag
    15841 ctccccgata ggccccgaaa tacctgaaac caacgaagaa ccgcaaagag agagtggaag
    15901 aacatcaacc ggaccccgaa accgccgccg ccgagacggc ttgctcgagg cactgcaaga
    15961 ctagcgggct gtagagatgg ctgtagagac gggctgtaga gatgggctgt agagatgggc
    16021 ttcagcccgc cgatccaagc aatccgaccg aaaccggccg cgccgccaat cccccgaaac
    16081 ctatgccccg ccaatcctgc cactcttcgt cattcccgcc gctttcgtca ttcccgcgaa
    16141 agcgggaatc cagcccctaa acgcggcagg aatctatcgg aaaaaacaga aacccccgcc
    16201 accgtcattc ccgcgaaagc gggaatctag accccaaacg cggcaggaat ctatcggaaa
    16261 aaacagaaac ccccgccgcc gtcattcccg cgaaagcggg aatccagacc ccgacgcaac
    16321 aggaatctat cggaaaaaac agaaaccccc gccgccgtca ttcccgcgca ggcgggaatc
    16381 cagaccccaa acgcggcagg aatctatcgg aaacggctga aaccgaacgg actggattcc
    16441 cgcctgcgcg ggaatgacgg cggcaggggt ttcgggattc ccgccttcgc gggaatgacg
    16501 gaaagtggcg ggaataacga aaggcgggaa tgaccgcgca aaaagccgct gcccccttcg
    16561 gacggcaccg gcaacaaaaa accgcacggc cgaaaccgcg cgggaaagga tagtcgggcg
    16621 cgcccgataa gcagcggccg cccccgttat ttcaattggg cgacatattg gcgcaaaacc
    16681 tcgttgatgc gcgtctgcca gcccttgccg ccggcgcgga atttttcgac cacatcggcg
    16741 gacaggcgta tggtaacgag ttgtttcggg gttttgcctg tgtttcgttt ttgcattacg
    16801 cccttttctt ccaattgttt ttgatgggaa aaaagcacct gtgccaagtc ttcgggcagg
    16861 gcttcgacaa tggggcgggc aagcgcaaaa tcttcggcgg caagttcccg cacttcgccg
    16921 tcagcgtttg ttaaggattg acgttgcata ttttttaacc tctcttttat tcgctttgcg
    16981 aaaactgatg acacggatgc cgtcttttat cggcgtaaaa cagacaatgt gcaggcgttg
    17041 cgtatcgcct agataagcag cggcaacata acgcggttcg gggtaatcaa agcagacatc
    17101 gggcacaata acggccgttg tccagcgtat ttgcccgact gattcaaagg gcaaattccg
    17161 ctcttcgata ttgcgttgat ttttttcgga gtcaaattca atcttcattg cagcttgcag
    17221 cgtattttgt cgttacatta taagcggcaa aaaaccaaaa tgtaaataca aaaaaggaaa
    17281 ccccgaaatg accatctatt tcaaaaacgg cttttacgac gacaccttgg gcagcatccc
    17341 cgaaggcgcg gttgccgtcc gcgccgaaga atacgccgcc cttttggcag gacaggcgca
    17401 gggcgggcag attgccgcag attccgacgg ccgccccgtt ttaaccccgc cgcgcccgtc
    17461 cgaataccac gaatgggacg gcaagaaatg ggaaatcggc gaagccgctg ccgccgcccg
    17521 tttcgccgaa caaaaaaccg ccacggcatt ccgcctcgcg gcaaaggcgg acgaactcaa
    17581 aaacagcctc ttggcgggct atccccaagt ggaaatcgac agcttttaca ggcaggaaaa
    17641 agaagccctc gcgcggcagg cggacaacaa cgccccgacc ccgatgctgg cgcaaatcgc
    17701 cgccgcaagg ggcgtggaat tggacgtttt gattgaaaaa gttgtcgaaa aatccgcccg
    17761 cctggccgtt gccgccggcg cgattatcgg aaagcggcag cagctcgaag acaaattgaa
    17821 caccatcgaa accgcgccag gattggacgc gctggaaaag gaaatcgaag aatggacgct
    17881 aaacatcggc tgaaaaaata cgtttaccac ctgttggtag ccatcgacca actgttcaac
    17941 gccctaaccg gcggcgcggc ggacgaaacc ctctcaagcc gcacctatcg cggcgcgcgg
    18001 ctcgcccaaa agcccaaaac ccgctggaag gttttataca ccctgatcaa cggcgtattt
    18061 ttcgaccgcc aacactgccg gcaggcgtat atcagcgaac tgaaaggcag gcagcacgac
    18121 gcgcggttca accaaagccg cgccgccggg gaaaagggga cgcgatgaac tacttcggca
    18181 tggtagagtt tctgcgcctg atggcaatgg tgcggccgcc atttgtcttc ttctccggca
    18241 cccgcagcga actgcctact tatcttgacc tcgtggcaga actgcgcctg accggatggg
    18301 agcgttttgc aggcagccaa accttgactg tgagcagcac atcaacagca attcaagcta
    18361 cgacgaccac ctgatttata agttctgacc gcaagtagcg tactactttt aaaggcataa
    18421 gataatcccc gtttaacaga ccattaaacg gggataaatt tgtgcaaaag ctaatacaat
    18481 ttcctacgct tcggcggtgc aaaagctgcc gccaattcgt gcaaaagctg ccgccgcctt
    18541 acattccagt gcaatgccgt ctgaaacttc gctaatctcg ggttgccgcg cgctgtgttg
    18601 ttcttcggta ctcagcaaaa agccgtacag acgctccaat cgggcgcggt aggcggtgaa
    18661 tttgttgtag aacatccgga aaaaagatag cgcgttttgc agtcgcgcaa aggcttggac
    18721 ggtctgctgg atgtcgccga ttttgatttg tccggcaaac aggcgcggcg cttgcaaaat
    18781 aatggggaag agtttgatgc cgttggtgaa catatcgtta aagccgctta agcagacgct
    18841 ttgccgcgcg atgcgccaac ggttgcggat aatggcttta aagcggtcgg aaagccggcc
    18901 gtgttcgtgt tgttcgccgt tgtaaaacgc tacgctttcg gcgtggtcgc gtacgcggat
    18961 gagggaataa cggtagtcgc cgttgagttt ttcgttttca tagttgtaac gaatcaaggg
    19021 gttgcctatc cacatcgcga taaaggtcgc caaaatcaca aaaataaaga cgagccaaac
    19081 aatgccgcgc ggaatgtcga agccgaacac ggtcaggatg ccagccaagc cccacaaaac
    19141 aacggcaaat tccaaagagg taacgaccga attgaccatg ccgcgtacaa attcgatggt
    19201 cgaagcgatg aaatcctgcg cgtcctgttg gatacgttgg tcgatgttgt ccggcgcgtg
    19261 gcggcgcatt tgcaggcggt agtagttttt gtcggcaagc cagcgcgtcg tcagcacttc
    19321 attgagctgc tccgaccatt taatcgccaa gccttgatcg aggaagtcgt tgacgacatt
    19381 gttaaacgcc cgtatcagca ccacgcccgc gttcatcgcg gcaaacatcc aaaacgcgga
    19441 ggcgttcaaa tcctgcatcg agtcgtaaag tcctttggac ataaaggtac tcaacacatt
    19501 cagccgtact tcggtcaaca gcagcgtaac cattaccgta atcagcagca agactttgac
    19561 cgtgcttttc ggtgtcaggc aaagccaaag cggtgtggaa taaagctcgg tttgccattt
    19621 ctgcatggga aatttcttac ggtatcaatg ccgtctgaaa aagacgggta cagttgattt
    19681 tttgatgaag tttggggaag ttttgccggt cagggtacat tgcgtg
//
LOCUS       DAWITQ010000022        19382 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.022, whole genome shotgun sequence.
ACCESSION   DAWITQ010000022 DAWITQ010000000
VERSION     DAWITQ010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19382)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19382)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19382
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.022"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            47..1225
                     /locus_tag="WIX18_000658"
     CDS             47..1225
                     /locus_tag="WIX18_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEZ5237803.1"
                     /translation="MAFLKLTEQNVQGKTVLIRADMNVPFKDGKISDDTRIRASLASI
                     QYCMDNGASVIVMTHLGRPTEGEFHPEDDVAPVAAHLGGLLGKNVKVLNDWRENKPAL
                     NAGDVVMLQNVRINKGEKKNDLELGKAYASLCDVFVNDAFGTAHRAQASTEAVAQAAP
                     VACAGVLMAGELDALGKALKQPARPMVAIVAGSKVSTKLTILESLADKVDQLIVGGGI
                     ANTFLLAEGKAIGKSLAEHDLVEESKKIMAKMAAKGGSVPLPTDVVVAKAFTADAEAV
                     VKDIADVAEDDMILDIGPKSAAELADLLKAAGTVVWNGPVGVFEFDQFAGGTKALAEA
                     IAQSKAFSIAGGGDTLAAIAKFGVTDQIGYISTGGGAFLEFLEGKELPAVAALEKRGA
                     "
     gene            complement(1292..1540)
                     /locus_tag="WIX18_000659"
     CDS             complement(1292..1540)
                     /locus_tag="WIX18_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HEZ5237804.1"
                     /translation="MLTSEQVKAMIEGVAKCEHIEVEGDGHHFFAVIVSSEFEGKARL
                     ARHRLIKDGLKAQLESNELHALSISVAATPAEWAAKAQ"
     gene            complement(1631..2548)
                     /gene="ftsX"
                     /locus_tag="WIX18_000660"
     CDS             complement(1631..2548)
                     /gene="ftsX"
                     /locus_tag="WIX18_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsX"
                     /protein_id="HEZ5237805.1"
                     /translation="MSIIHYLSLHVESARTALKQLLRQPFGTLLTLIMLAVAMTLPLF
                     MYLGIQSGQSVLGKLNESPQITIYMETAAAQSDSDTVRSLLARDKRLDNIRFIGKEDG
                     LEELQSNLDQNLISMLDGNPLPDVFIVTPDPATTPAQMQAIYRDITKLPMVESANMDT
                     EWVQTLYQINEFIRKILWFLSLTLGMAFVLVAHNTIRLQILSRKEEIEITKLLGAPAS
                     FIRRPFLYQAMWQSILSAAVSLGLCGWLLSAVRPLVDAIFKPYGLNIGWRFFYPGEIA
                     LVFGFVIALGVFGAWLATTQHLLGFKAKK"
     gene            complement(2545..3195)
                     /gene="ftsE"
                     /locus_tag="WIX18_000661"
     CDS             complement(2545..3195)
                     /gene="ftsE"
                     /locus_tag="WIX18_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HEZ5237806.1"
                     /translation="MIRFEQVSKTYPGGFEALKNVSFQINKGEMIFIAGHSGSGKSTV
                     LKLISGITKPSRGKILFNGQDLGTLSDNQIGFMRQHIGIVFQDHKILYDRNVLQNVIL
                     PLRIIGYPPRKAEERARIAIEKVGLKGRELDDPVTLSGGEQQRLCIARAVVHQPGLLI
                     ADEPSANLDRAYALDIMELFKTFHEAGTTVIVAAHDETLMADYGHRILRLSKGRLA"
     gene            complement(3192..3383)
                     /locus_tag="WIX18_000662"
     CDS             complement(3192..3383)
                     /locus_tag="WIX18_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237807.1"
                     /translation="MPSESASDGIFPARPSVSAKLIHYLKTGGIFIIGTVLPIVQTAY
                     PCGRNRPKRYAAHSLQDLL"
     gene            complement(3391..3873)
                     /locus_tag="WIX18_000663"
     CDS             complement(3391..3873)
                     /locus_tag="WIX18_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEZ5237808.1"
                     /translation="MKYLNLAAITLAATFAAHTASADELAGWKDNTPQSLQSLKAPVR
                     IVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIW
                     RYTGANSRNFMKSYGNNVGVLPFTVVEAPKCGYKQTITGEVNEKSLTEAVKLAHSKCR
                     "
     gene            3997..4350
                     /gene="arsC"
                     /locus_tag="WIX18_000664"
     CDS             3997..4350
                     /gene="arsC"
                     /locus_tag="WIX18_000664"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271974.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HEZ5237809.1"
                     /translation="MSEIKIFHNPRCSKSRAALSLLEERGIAAEVVKYLDTPPDLSEL
                     KDIFNKLGLASARGMMRVKDDLYKELGLDNPNLDNDALLRAIADHPALLERPIVLANG
                     KAAVGRPLENIEAVL"
     gene            4347..4991
                     /locus_tag="WIX18_000665"
     CDS             4347..4991
                     /locus_tag="WIX18_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEZ5237810.1"
                     /translation="MNKRLFCSRNGLRYYLLGGFCLSVFPFLLVFASSVWAVYRTGGQ
                     VLPPYVRADAALVLGAAAWDKRPSPVFRERINHAIALYQSRRVGKIVFTGGRTKKGYM
                     TEAEVGRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLA
                     RAAEMAEDLGVRVYMSATPTTRFDAGNKKKIFMLQEGYALSLYRLEKWGRDFFN"
     gene            5195..6589
                     /locus_tag="WIX18_000666"
     CDS             5195..6589
                     /locus_tag="WIX18_000666"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEZ5237811.1"
                     /translation="MTVKTRFAPSPTGYLHIGGVRTALFSWAFARHHKGEFLLRIEDT
                     DLARSTAESVNIILDGMKWVGLDYDNADNVVYQTRRFERYKEVIAELLAKGDAYYCYC
                     SKEELEAMREKAEKEGTATYDRRWRPEAGKTLPEIPAGVQPVVRFKTPLDGVTKWTDL
                     VKGEISIPNEALDDLIIARADGTPTYNFCVVVDDYDMGVTHVIRGDDHVNNTPKQINI
                     LKAIGANLPEYGHLPMILNEQGKKISKRSGDTVAITDFGAMGILPEAMLNYLARLGWA
                     HGDDEFFTMEQFIEWFDLKDVSPSPSRMDLKKLYWINGEHIKITPNEKLAELVKPRLA
                     LRDIHETEKPALEDVLAQVKDRAQDLNALADECLYFYKKQVPAEADVAKHWDDEAAAR
                     MLRFAERLEGLEDWNAEAIHDLFKPFCDEEGIKMGKLGMPLRLAVCGTAKTPSVDAVL
                     ALIGKEEVLKRIRA"
     gene            6610..7005
                     /locus_tag="WIX18_000667"
     CDS             6610..7005
                     /locus_tag="WIX18_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237812.1"
                     /translation="MPSDVGMRLQTAFKRKLNMKKILYFLMFVFSTSVWAGDAEDNLL
                     SIQSGYRALLQKQNNLDGKIIGMQSDLEDARRRLQTAQADIARLEAEIPAAMAQKARQ
                     AEELRQIGVRLDYAWNAVYGAGGTKASGN"
     gene            7009..7500
                     /locus_tag="WIX18_000668"
     CDS             7009..7500
                     /locus_tag="WIX18_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ5237813.1"
                     /translation="MNSLFVDNTVFITRLKAGHIGRLVQALFEEWHGFEPWSSVDKIH
                     AYYGRCLKDDELPLAFAAVDDSGTLLGSATVKRHDMESFPQYEYWLGDVFVLPEYRGK
                     GIGRRLVAHCIGAARSLGIKFLYLYTPDVQIFYESFGWAVVGRHFHNGEWVTVMRLDM
                     DKV"
     gene            complement(7623..10217)
                     /gene="mutS"
                     /locus_tag="WIX18_000669"
     CDS             complement(7623..10217)
                     /gene="mutS"
                     /locus_tag="WIX18_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEZ5237814.1"
                     /translation="MSKSAVSPMMQQYLGIKAQHTDKLVFYRMGDFYEMFFDDAVEAA
                     KLLDITLTTRGQVDGEPVKMAGVPFHAAEQYLARLVKLGKSVAICEQVGEVGAGKGPV
                     ERKVVRIVTPGTLTDSALLEDKETNRIVAVSPDKKYIGLAWASLQSGEFKTKLTTVDK
                     LDDELARLQAAEILLPDSKNAPQLQTASGVTRLNAWQFAADAGEKLLTEYFGCQDLRG
                     FGLDGKEHAVAIGAAGALLNYIRLTQNLMPQHLDGLSLETDSQYIGMDAATRRNLEIT
                     QTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAVAALESQYKPL
                     QCRLKNIADIERIAARIAVGNARPRDLASLRDSLFELAQIDLSANGSSLLETLKAVFP
                     ENLSTAEQLRQAILPEPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERE
                     RTGLSTLKVEFNRVHGFYIELSKTQAEQAPADYQRRQTLKNAERFITPELKAFEDKVL
                     TAQEQALALEKQLFDGVLKNLQTALPQLQKAAKAAAALDVLSTFSALAKERNFVRPEF
                     ADYPAIHIENGRHPVVEQQVRHFTANHTNLDHKHRLMLLTGPNMGGKSTYMRQVALIV
                     LLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSL
                     VLMDEVGRGTSTFDGLALAHAVAEHLLQKNKSFSLFATHYFELTYLPEAHAAAVNMHL
                     SALEQGQDIVFLHQIQPGPAGKSYGIAVAKLAGLPVRALKSAQKHLNELENQAAANRP
                     QLDIFSTMPSEKGDEPNVGNFVDKAEEKHFEGILAAALEKLDPDSLTPRKALSELYRL
                     KDLCKSVS"
     gene            10659..11663
                     /gene="gap"
                     /locus_tag="WIX18_000670"
     CDS             10659..11663
                     /gene="gap"
                     /locus_tag="WIX18_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003766473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEZ5237815.1"
                     /translation="MSIKVAINGFGRIGRLALRQIEKAHDIEVVAVNDLTPAEMLLHL
                     FKYDSTQGRFQGTAELKDDAIVVNGKEIKVFANPNPEELPWGELGVDVVLECTGFFTN
                     KTKAEAHIRAGARKVVISAPGGNDVKTVVYGVNQDILDGSETVISAASCTTNCLAPMA
                     AVLQKEFGVVEGLMTTIHAYTGDQNTLDAPHRKGDLRRARAAALNIVPNSTGAAKAIG
                     LVIPELNGKLDGSAQRVPVATGSLTELVSVLERPVTKEEINAAMKAAASESYGYNEDQ
                     IVSSDVVGIEYGSLFDATQTRVMTVGGKQLVKTVAWYDNEMSYTCQLVRTLEYFAGKI
                     "
     gene            complement(11733..11852)
                     /locus_tag="WIX18_000671"
                     /pseudo
     CDS             complement(11733..11852)
                     /locus_tag="WIX18_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(11921..12601)
                     /gene="tsaA"
                     /locus_tag="WIX18_000672"
     CDS             complement(11921..12601)
                     /gene="tsaA"
                     /locus_tag="WIX18_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HEZ5237816.1"
                     /translation="MTYTITPIGTARSPYKQKFGIARQPGLVSAAEVCIELNPEFTAD
                     SVRGLEHFDYVWISFIFHGVLDEGWAQMVRPPRLGGKQKMGVFATRSPHRPNHLGLSL
                     LKLERIETGKPVRLYCSGADLLDGTPIVDIKPYIPFVESKPDAASGFVSGKPVELEVV
                     WQENIGAENLSANTKNLISQSIAQDPRPAYQNIPERIYVMNIADYEVRFQIEENRATV
                     IDLSPTPL"
     gene            12715..13350
                     /locus_tag="WIX18_000673"
     CDS             12715..13350
                     /locus_tag="WIX18_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamidase"
                     /protein_id="HEZ5237817.1"
                     /translation="MIVSIDVDAQKTFTPLCPDELPVNEGHLIVEELNAQAALADLRV
                     MTKDAHHMVAKWLVDNPVDMLKPTGLPDADLTWVAHAMVGTRGYELLDGLPCAKEYDY
                     CVWKGVDPELHPYGACFHDIEEKLSTGLIEWLRCQNTDTVIVGGLATDYCVKTTVLQL
                     LKGGNWQVIVNEAACRGIAPDTIETAWQEMRSAGAVILKNAEEIKKHINNQ"
     gene            13388..14356
                     /gene="waaC"
                     /locus_tag="WIX18_000674"
     CDS             13388..14356
                     /gene="waaC"
                     /locus_tag="WIX18_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HEZ5237818.1"
                     /translation="MKILLVRLSSMGDLIHTLPAIEDLARQCPGVELHWLCEAGFTDI
                     ARLHPFVKKIHVMKWRQWRKHLFRAETWREMGHLKQTLRQEVFDFVLDSQGLIKSACF
                     AKMAKSPIYGLDKNSAREGWAALAYVKTYAVPKGKNAVWRNRELFAQVFGYVMPETQV
                     FGLTVPEAGRLKNLAQPYYAALHATSRDSKLWPVENWRSLLQKLNEEQQCNIYLPWGN
                     EDEKTRAKQIADGLPFAIVCDKINLLQAAYLLKYAVGIVGVDTGLLHLANALEKPVVG
                     IYTDTDPIKTGVQVSPIAKNLGNIGQIPTADLVYQALMDCVAADKG"
     gene            14583..15332
                     /locus_tag="WIX18_000675"
     CDS             14583..15332
                     /locus_tag="WIX18_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HEZ5237819.1"
                     /translation="MKALVAVKRVVDYNVKVRVKADGSDVDIGNVKMSMNPFDEIAVE
                     EAVRLKEAGKVSEIVAVSLGEKKCEETLRTALAMGADRAIHVETDAKLEPLAVAKLLK
                     AVADKENPQIFFLGKQAIDDDANQVAQMLAALLNAAQGTFASKVQIEGDEVQIVREID
                     GGEETIALKLPAVISADLRLNEPRFVKLPNIMAAKKKPLEKLAPADLATDILPRLKTV
                     KFAEPKARQAGVKVASVAELVEKLKNEAKVI"
     gene            15343..16278
                     /locus_tag="WIX18_000676"
     CDS             15343..16278
                     /locus_tag="WIX18_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HEZ5237820.1"
                     /translation="MSVLIIVEHDNKQLNPTTLHAVTAAAKLGKVDLLVAGSGASAVV
                     ESAKQVAGVEKVLVADAAHYAEGLAEELAPLVVKLAADYRYVAATATTFGKNLLPRVA
                     ALLDVPQISDLTEIVDNTTFVRPIYAGNAFETVQANAEKLVLTFRATAFDAAAVQGGN
                     AEVINIETTPAQNLSRFVNRQLSHSDRPELTQAKVIVSGGRALGSAEKFNEVLTPLAD
                     VLGAAIGASRAAVDAEYAPNDAQVGQTGKVVAPQLYFAIGISGAIQHVAGMQDSKVIV
                     AINKDADAPIFNVADYGLVGDLFEIVPQLTEALKN"
     gene            16341..16952
                     /locus_tag="WIX18_000677"
     CDS             16341..16952
                     /locus_tag="WIX18_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HEZ5237821.1"
                     /translation="MITTYKTITSPTQAGFKDKGSRFIAFAYPIRTLADVKKYLDPLK
                     EEHHKARHWCYAYRLGVDGMQFRANDDGEPSGSAGRPILGQIDSVGITDVLVVVVRYF
                     GGTLLGVSGLIHAYKEATAQALAIAEVIEKNIEKTVWLKCEYPFLNEAIRIAKQYQAD
                     ILEQDLQLDCRLTVSLSLANYEVCVAAWKNTRQIEVNTEKPFE"
     gene            complement(17004..17321)
                     /locus_tag="WIX18_000678"
     CDS             complement(17004..17321)
                     /locus_tag="WIX18_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4298 domain-containing protein"
                     /protein_id="HEZ5237822.1"
                     /translation="MQKRIDEIQSKYREWCHLLPQLEEDIRRWKHAVALIRDMDNFYT
                     HEYQACHRAIEDGAEVDLRTEGEYSIMSEDALWNALGEFHQLAWLYLRSSVDALDKYT
                     QED"
     gene            17479..18750
                     /gene="purD"
                     /locus_tag="WIX18_000679"
     CDS             17479..18750
                     /gene="purD"
                     /locus_tag="WIX18_000679"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HEZ5237823.1"
                     /translation="MKLLVIGNGGREHALAWKLAQSPKVETVFVAPGNAGTAIEPKLQ
                     NIDLTAHQDLIEFCRKENIVFTVVGPEAPLAAGVVDDFRAAGLKIFGPTQYAAQLESS
                     KDFAKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPIVIKADGLAAGKGVIVAMTLD
                     EAHAAIDDMLLDNKMGNAGARVVIEDFLQGEEASFIVMVDGNNVLPMATSQDHKRLLD
                     GDKGLNTGGMGAYSPAPVVTPVVYERAMNEIILPTVAGMKAEGHEFTGFLYAGLMIDQ
                     SGAPYTIEFNCRFGDPETQPIMSRLNSDLADLVEAAIDGKLDSVAAEWNPQTAVGVVL
                     AAQNYPETPKKGDVISGLDAANQVGKVFHAGTTANEKGDVLTNGGRVLCVVGLGDNVA
                     QAKAKAYGALEKISFDGMQYRKDIADKAINR"
     gene            18784..>19382
                     /locus_tag="WIX18_000680"
     CDS             18784..>19382
                     /locus_tag="WIX18_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HEZ5237824.1"
                     /translation="MTDMLQTAFYIMLFPRIIAASAQRKLSVYLKKGGLVAYPTESCY
                     GLGCLPTLAKALGKLAHLKKRPQHKGMIVIGNQFEQLQPLLQMPSENLQDMLRKEWPA
                     PKTFLLSAKSCVLPELRGKQRSKLAVRVPAHVGARRLCRALQTPLVSTSCNRAGKRAC
                     RTEREVRRQFGRDVWIVGGRIGRQKSPSQIIDGETGKRLR"
BASE COUNT         4681 a         4390 c         5439 g         4872 t
ORIGIN      
        1 cattaattgt ttctgtatcg caaacactga ttgaaaagga ctgattatgg catttttaaa
       61 actgaccgaa caaaacgtgc agggcaaaac cgtcctcatc cgcgccgata tgaacgtgcc
      121 gttcaaagac ggcaaaatca gcgacgacac ccgtatccgc gcctcgctcg cgtccatcca
      181 atactgcatg gacaacggcg catccgttat cgtgatgacc cacttgggcc gcccgaccga
      241 aggcgagttc caccccgaag acgacgttgc gcccgttgcc gcgcatttgg gcggcctgtt
      301 gggcaaaaac gtgaaagtat tgaacgactg gcgcgaaaac aaaccggctt tgaacgcggg
      361 cgatgtcgtg atgctgcaaa acgtgcgtat caacaaaggc gagaagaaaa acgatttgga
      421 actgggcaaa gcctacgctt ctttgtgcga cgtgttcgtc aatgacgcgt tcggcaccgc
      481 gcaccgcgcc caagcctcga ccgaagccgt cgcccaagcc gctcccgttg cctgcgccgg
      541 cgtattgatg gcgggcgaac tcgacgcttt gggcaaagcc ttgaaacagc ccgcgcgccc
      601 gatggttgcc atcgttgccg gcagcaaagt gtccaccaag ctgaccatcc tcgaatcgct
      661 ggcggacaaa gtcgaccaac tcatcgtcgg cggcggcatt gccaacacct tcctgttggc
      721 ggaaggcaaa gccatcggca aatctttggc ggaacacgat ttggtggaag aatccaaaaa
      781 aattatggca aaaatggcgg ccaaaggcgg ttctgtgccg ctgccgaccg atgtcgtcgt
      841 tgccaaagcc tttaccgccg atgccgaagc ggtcgtgaaa gacattgccg acgttgccga
      901 agacgatatg attttggaca tcggcccgaa atccgccgcc gagcttgccg atttgctcaa
      961 agctgccggt acggttgtat ggaacggccc tgtcggcgtg tttgagttcg atcaattcgc
     1021 aggcggcacg aaagctcttg ccgaagccat tgcccaaagc aaagcattct cgattgcagg
     1081 cggtggcgac acgctggcgg cgattgctaa attcggcgtt accgaccaaa tcggctatat
     1141 ttctaccggc ggaggcgcgt ttcttgagtt cttggaaggt aaagagttgc ctgccgtagc
     1201 cgctttggaa aaacgcggcg cgtaagcggt ttgatataaa aaatgccgtc tgaaacgttg
     1261 tgctgtttct gacggcattt ttgtgtggcg attattgtgc tttggctgcc cattccgccg
     1321 gagtggcggc aaccgaaatg gaaagtgcgt gcagttcgtt actttccagt tgggctttga
     1381 gtccgtcttt aatcaggcgg tggcgcgcga ggcgtgcctt gccttcaaat tctgatgaaa
     1441 cgatgacggc gaaaaaatgg tgtccgtcgc cttctacttc gatatgttcg cattttgcca
     1501 cgccttcaat catggctttt acttgttccg aggtcagcat ggtaggttcc ttgttggaaa
     1561 aatgcgccat tatactggca aattgaaatg ccgtctgaaa acgggttcgg acggcatttt
     1621 tgacggtgtt ttattttttg gctttgaagc cgagcaggtg ctgggtggtg gcaagccacg
     1681 cgccgaatac gcccaacgcg atgacgaagc cgaacaccag tgcgatttct cccgggtaga
     1741 agaaacgcca gccgatatta agtccgtagg gtttgaagat ggcatcgacc aaggggcgca
     1801 cggcagagag cagccaaccg caaagcccca agctgacggc ggcggaaagg atgctctgcc
     1861 acatggcttg ataaaggaat gggcggcgga taaacgacgc gggcgcgccc aagagtttgg
     1921 tgatttcgat ttcttctttg cggctgagga tttgcagtcg gatggtgttg tgcgcgacaa
     1981 ggacgaacgc catccccagc gtcagggaaa gaaaccataa gattttacgg atgaattcgt
     2041 tgatttggta cagtgtctgt acccattccg tatccatgtt ggcggattcg accataggca
     2101 gtttggtaat gtcccggtag attgcctgca tttgggcggg cgtggttgcc gggtcggggg
     2161 taacgataaa gacatccggc agggggttac cgtcaagcat ggaaatcaga ttttggtcga
     2221 gattggactg taattcttcc agaccgtctt ctttgcctat gaagcggatg ttgtcgagcc
     2281 gtttgtcgcg cgccagcagg ctgcggacgg tatcgctgtc gctttgtgcg gcggcggttt
     2341 ccatatagat tgtgatttgc ggcgactcat tgagtttgcc caacacgctt tgcccgcttt
     2401 ggatgcccaa atacataaac agcggcaggg tcatggcgac ggcgagcatt atgagggtaa
     2461 gcagtgtgcc gaaaggttgg cgcagaagct gtttgagcgc ggtgcgcgcg gattcgacgt
     2521 gcagcgagag gtagtggatg atgctcatgc gagtcgtcct ttcgagaggc gcaggatgcg
     2581 gtgtccgtag tccgccatca gggtttcgtc atgtgcggcg acgatgacgg ttgttcccgc
     2641 ttcgtggaag gttttgaaca attccataat atcgagcgcg taggcgcggt cgaggttggc
     2701 ggagggttcg tcggcaatca gcaggccggg ctggtgaacg acggcgcggg cgatgcacag
     2761 gcgttgttgt tcaccgccgg agagggttac gggatcgtcc aattctcgtc ctttcaggcc
     2821 gactttttcg atggcgatgc gggcacgctc ttcggctttg cgcggcggat agccgataat
     2881 ccgaagcggc aggatgacgt tttgcaggac gttgcggtcg tagaggattt tgtggtcttg
     2941 gaacacgatg ccgatgtgtt ggcgcataaa gccgatttgg ttgtcggaca atgtgccgag
     3001 gtcctgcccg ttaaacagga ttttgcccct gctcggcttg gtgatgcccg aaatcagctt
     3061 gaggacggtg gatttgcccg aaccggagtg tcccgcgata aatatcattt cgcctttgtt
     3121 gatttggaag ctgacgtttt tcagggcttc aaaaccgccg ggataggttt tggaaacttg
     3181 ttcgaaacgg atcataggag gtcctgtaag gaatgggcgg catatcgttt cgggcggttg
     3241 cgtccgcagg gatatgccgt ctgaacaata ggtaagacag tgccgattat aaagattccg
     3301 cctgttttta gatagtggat aagtttggcg gataccgaag gtcgggcggg aaaaatgccg
     3361 tctgaagcgg attcagacgg catccggcgt ttaacggcat tttgaatggg cgagtttgac
     3421 ggcttcggtc aggctttttt cgttcacttc cccggtaatg gtttgtttgt atccgcattt
     3481 cggggcttcg acgacggtaa agggcagtac gccgacattg tttccgtagg atttcataaa
     3541 gtttcggctg ttcgccccgg tgtaacgcca aatcgggtag gaaacagggg tttgcttgag
     3601 gaagttgccg atattgtcgg atgtgtcgag cgcgatgccg accatatcga cactgccttt
     3661 tttctgcgct ttgtaccatt tggacatggc aggcatctct tttcggcacg ggccgcacca
     3721 ggttgcccaa aggttgacga tgcgtacggg ggctttgagt gattgcaggc tttgcggggt
     3781 gttgtctttc catccggcca gttcgtctgc cgaggcggta tgtgcggcaa atgtggcggc
     3841 aagggtgatt gcggcaagat tcaagtattt catcgttttg tcctttgtat gtcgattcgg
     3901 gtattgtaaa ccgtttggta cggttgtagg cgggatattg agtaaaaccc tgtgtaagcc
     3961 gataataagg ggattgtcga gaagtaagga aatgtcatgt ctgaaatcaa aattttccac
     4021 aacccccgtt gcagcaaatc gcgtgccgcc ttgtccctat tggaagaacg cggcattgct
     4081 gccgaagtgg tcaaatattt ggatacgccg cccgacttgt ccgaattgaa ggatattttc
     4141 aacaaattgg gcttggcatc ggcgcgcggg atgatgcgcg tgaaagatga tttgtataag
     4201 gaattgggtt tggacaaccc caatttggac aatgacgcgc tgctgcgtgc catcgccgat
     4261 catcccgccc tgttggagcg tccgattgtt ttggcgaacg gtaaggcggc tgtcggcagg
     4321 ccgttggaaa atatcgaagc ggtattgtga acaaacggct gttttgcagc cgcaacggct
     4381 tgcgctatta cctgttgggc ggtttctgtt tgagtgtttt tccgtttttg ctggtgtttg
     4441 cctcatccgt ttgggcggtt tatcggacgg gcgggcaggt tttgccgccg tatgtccggg
     4501 cggatgccgc gctggtgttg ggcgccgccg cgtgggacaa acgcccttct ccggtttttc
     4561 gggaacgcat caaccacgcc atcgcgcttt atcagagccg cagggtaggc aaaatcgtgt
     4621 ttacgggagg gcgaaccaaa aaaggctata tgaccgaagc cgaggtcggg cggcggtacg
     4681 cgctcaaaca gggggttccg gcgcgcaaca tcctgtttga aaacacttcg cgcaacactt
     4741 atgaaaacct gaacaacatc cgtccggttt tgcgtgccaa cggtattgcc agcgtggtga
     4801 ttgtcagcga tccctaccat ttggcacggg cggcggaaat ggcggaggat ttgggtgtcc
     4861 gcgtttatat gtctgccacg ccgaccacgc ggtttgatgc gggaaataag aaaaaaatct
     4921 ttatgctgca agagggatat gcgttatccc tctaccgttt ggaaaaatgg gggcgggatt
     4981 ttttcaatta gctgtttcat tgaacttttt tttggacgca atcccgaaga aatccggtcg
     5041 gcggcgcgtg atacactgtt ccgcgtgccg aagcattgaa aacaaggaaa atgccgtctg
     5101 aaacttatcc gcaggcaggg ttcggacggc atttttaatg cccaagcacg gtaaaaacag
     5161 taaaataagc cgttttaaag attctggagc catcatgacc gtcaaaaccc gtttcgcccc
     5221 cagccccacc ggctacctgc acattggcgg cgttcgcacc gccttgtttt catgggcgtt
     5281 tgcccgccat cacaaaggcg agttcctatt gcgtatcgaa gacaccgact tggcgcgttc
     5341 caccgccgaa tccgtcaaca tcatcctcga cggcatgaaa tgggtcggtc tcgattacga
     5401 taacgccgac aacgtggtgt accaaacccg ccgcttcgaa cgctataaag aagtcatcgc
     5461 cgaactcttg gcaaaaggcg atgcctacta ctgctattgc agcaaagaag agctggaagc
     5521 gatgcgcgag aaagccgaaa aagaaggcac ggcgacttac gaccgccgct ggcggccgga
     5581 agcaggcaaa accctgcccg aaatccctgc cggcgtgcaa cccgtcgtcc gcttcaaaac
     5641 gcctttggat ggcgtaacca agtggacgga cctggtcaaa ggcgaaattt ccatccccaa
     5701 cgaagccctc gacgacctga ttattgcacg cgccgacggc acaccgacct acaacttctg
     5761 cgttgtcgta gacgactacg acatgggcgt tacccacgtt atccgcggcg acgaccatgt
     5821 gaacaacacc ccgaaacaaa tcaacatctt aaaagccatc ggcgcaaacc tgcccgaata
     5881 cggtcatctg cccatgattc ttaacgaaca aggcaaaaaa atctccaaac gcagcggcga
     5941 tactgttgcc attaccgatt tcggcgcgat gggtatcctg cccgaagcca tgctcaacta
     6001 tctggcgcgc ttgggctggg cgcacggcga cgacgagttc tttacgatgg aacaattcat
     6061 cgaatggttt gatttgaaag acgtttcccc gtccccaagc cgtatggatt tgaaaaagct
     6121 ctattggatc aacggcgaac acatcaaaat cacgcccaac gagaaactcg ccgaactcgt
     6181 caaaccgcgt ctcgctctgc gcgatatcca tgaaaccgaa aaacctgcgt tggaagacgt
     6241 gttggcacag gttaaagacc gcgcccaaga tttgaacgcc ttggcagacg aatgtctgta
     6301 tttctacaaa aaacaagtcc ctgccgaagc cgatgttgcc aaacactggg acgacgaagc
     6361 cgccgctcgt atgctgcgct ttgccgaacg cctcgagggt ttggaagact ggaatgccga
     6421 agccatccac gacctcttca aacctttctg cgacgaagaa ggcatcaaaa tgggtaaact
     6481 cggtatgccc ctgcgcctcg ccgtctgcgg tacggcgaaa accccaagcg tcgatgctgt
     6541 gttggcatta atcggcaaag aagaagtgtt gaaacgcatc cgcgcttaag ttatccacag
     6601 gcgtgggcga tgccgtctga tgtcggaatg cggcttcaga cagcattcaa acggaagttg
     6661 aacatgaaaa aaatattgta ttttctgatg tttgtttttt ctacaagcgt atgggcgggg
     6721 gatgcggaag acaatctgct cagcatccaa tccggctatc gtgccttact gcaaaaacaa
     6781 aacaatctgg acggaaaaat catcgggatg cagtcggatt tggaagatgc gcgccggcgt
     6841 ttgcagacgg ctcaggcaga catcgcccgt ttggaagcgg aaattcctgc agcaatggcg
     6901 caaaaagccc ggcaggctga agagctgagg caaatcggag tgcgtttgga ctatgcttgg
     6961 aatgcggttt acggcgcagg gggaacgaaa gcgtcgggga attgaccgat gaattccctc
     7021 tttgtggaca atactgtttt cattacacgg ctgaaagccg ggcatatcgg caggttggtt
     7081 caggcgttgt ttgaggagtg gcacggattt gaaccgtggt cttctgtgga taagattcat
     7141 gcctattacg gcaggtgttt gaaggatgac gaactgccgc tggcttttgc ggctgtggat
     7201 gattccggaa ccctgttggg ttcggctacg gtcaagcggc atgatatgga aagttttcca
     7261 cagtatgaat attggttggg tgatgtcttt gttttacctg aatatcgcgg aaaaggcatt
     7321 ggcaggaggc tggtcgccca ctgcataggc gcagcgcgtt cgctggggat aaagttcttg
     7381 tatctttata cgcctgatgt gcaaatattt tatgaatcat tcggctgggc ggttgtcggg
     7441 cgacatttcc ataacggtga atgggttacg gttatgcgtt tggatatgga taaggtttaa
     7501 gccgaatgga caaatgccgt ctgagctgtt cggacggcat ttttatgttt ggaaacttct
     7561 tgtcagataa tgtttatcca cagatttttc catatggttt gatgctgttc cgccaacgga
     7621 aattaagata cggatttgca caaatctttc agacggtaca gttctgacaa tgctttgcgc
     7681 ggggtcaggc tgtcgggatc gagtttttcc aaggctgctg ccaatatacc ttcaaaatgt
     7741 ttttcctctg ctttatccac aaagttgccc acattcggtt catctccttt ttcagacggc
     7801 atggtactga aaatatccag ttggggacgg ttcgcggcgg cttggttttc cagttcgttc
     7861 aaatgctttt gggcggattt caatgcgcgt acaggcaggc cggcgagttt ggcgacggca
     7921 atgccgtagc ttttaccggc gggacccggt tggatttggt gcaggaaaac gatgtcctgt
     7981 ccctgttcga gcgcggaaag gtgcatattg acggcggcgg cgtgggcttc gggcaggtag
     8041 gtcagctcga aatagtgggt ggcaaacagg ctgaaggatt tgtttttttg cagcaggtgt
     8101 tcggcaacgg cgtgcgcgag ggcgaggccg tcgaaagtgg aagtgccacg tccgacttcg
     8161 tccattaaaa caaggctttg ttcggtggcg tgatgcagga tgtaggcggt ttcgctcatt
     8221 tcgaccatga aagtggagcg gttggaggcg aggtcgtccg atgcgccgat gcgggtgaag
     8281 atttgatcga tgggcccgat tgtggcggca tcggcaggca caaaacagcc ggtgtgtgcc
     8341 aataaaacaa tcagcgcgac ttggcgcatg taggtggatt tgccgcccat attggggccg
     8401 gtgagcagca tgaggcggtg tttgtggtca aggttggtgt ggttggcggt gaagtggcgt
     8461 acctgctgtt cgacaacggg atggcggccg ttttcgatgt ggatagccgg atagtcggca
     8521 aactcggggc ggacgaagtt ccgctctttt gccaaggctg aaaatgtgga caatacgtcc
     8581 agcgcggcgg cggctttggc ggctttttga agctgcggca atgccgtctg aaggtttttc
     8641 aatacgccgt caaagagttg tttttctaag gcgagggctt gctcttgagc agtcagcact
     8701 ttgtcttcaa aggctttcaa ctccggcgtg atgaagcgtt cggcgttttt gagggtttgc
     8761 cggcgttggt agtcggcagg tgcttgttcg gcttgggttt tggacaattc aatgtaaaag
     8821 ccgtgaacgc ggttgaactc gactttgagt gtggacaaac cggtacgttc gcgttccttg
     8881 gcttccaaat ccagcaaaaa ttcgtcgcca tggttttgaa tgcggcgcaa ttcgtccagt
     8941 tcgggatgaa aaccgtggtt gatgacattg ccgtctttca gccagacgga aggttcgggc
     9001 aaaatggctt ggcggagctg ttcggctgtg gataggtttt ccgggaaaac ggctttgagg
     9061 gtttccaaca ggctgctgcc gtttgcggac aagtcgattt gtgccaactc gaacagactg
     9121 tcgcgtaaag atgccaaatc gcgcgggcgg gcgttgccga cggcgatgcg ggcagcaatg
     9181 cgttcaatgt ccgcaatgtt tttcagacgg cattggaggg gtttgtattg gctttccagc
     9241 gcggcaacgg cttcttggcg cgctcggatg tgggcgcggt tgcgtaaagg gtggtgcagc
     9301 cagagagcca agaggcggct gcccatatgg gtagcgcaaa ggtcgagcgt ggacatcagg
     9361 gtcggcgatt ttttgccgga gagggtttgc gtgatttcga gattgcggcg cgtggcagca
     9421 tccataccga tatattggct gtcggtttcg agcgacaggc cgtccaaatg ttgcggcatc
     9481 aggttttgcg tcagacggat atagttcaac agtgcacctg ccgcgccaat cgcaacggcg
     9541 tgttctttgc cgtccaaacc gaagccgcgc aaatcctggc agccgaaata ttccgtcagc
     9601 agtttttccc ccgcgtcggc ggcaaactgc cacgcgttca ggcgcgtaac acccgatgcc
     9661 gtctgaagtt gcggtgcgtt tttactgtcc ggcaacagaa tttccgccgc ctgcaggcgc
     9721 gccagttcgt cgtccaattt atccacagtt gtcagcttgg ttttgaattc gccgctttgc
     9781 agcgatgccc acgccaaacc gatgtatttt ttgtcggggg acacggcaac gatacggttg
     9841 gtttccttgt cttccagcaa tgcggaatcg gtcagcgtgc cgggcgttac gatgcgcacg
     9901 actttgcgct ccacaggccc tttgcccgcg ccgacttcgc cgacctgttc gcaaatcgcc
     9961 acgcttttgc ccaacttgac taggcgcgcc agatattgtt cggcggcgtg aaacggcacg
    10021 cctgccattt tgaccggctc gccatccacc tgtccgcgcg tggtcagggt aatatccaaa
    10081 agttttgccg cttctaccgc atcgtcgaaa aacatctcgt aaaaatcgcc catacggtaa
    10141 aacaccagtt tgtcggtatg ttgcgctttg atgccgaggt attgctgcat cattggggaa
    10201 acggcggatt tggacatggg gctgccttat cattaggaaa acggtattgt agcaaaaggt
    10261 tttgtcttcg acggaatgag actgaccgta agcctgtcaa taaggttgtg gagacaacta
    10321 ggaaaacagc aaagttatcc acagaaatat tattaagtca aaaaacatcc acgcttatct
    10381 gtcttataca gcaagtctta aactcaaact tatttgacaa aaagataatg aaaatattgg
    10441 atatttgcta cttacgcaca agcaggttgg caatcatcaa aatcatcatt aaaatttaaa
    10501 ttcaaatatt gatggtaaag gttttggaaa tctgtgcaaa cagcaaaatt catctatatc
    10561 aaataagcgt caagtagtta gatgtaatag tggaatgtaa ctttatttca gaatacaatg
    10621 caggcatcgg actttatttc acaacctgga gacaaaatat gagcattaaa gtagcgatta
    10681 acggtttcgg ccgcatcggc cgcctcgcat tgcgtcaaat tgaaaaagcc cacgacatcg
    10741 aagtcgtcgc cgtcaacgac ctgacccctg ccgaaatgct gctgcacctt ttcaaatacg
    10801 acagcacgca aggccgtttc caaggtactg ccgaattaaa agacgatgcc atcgtggtaa
    10861 acggcaaaga aatcaaagtt tttgccaatc cgaatcccga agaattgcct tggggcgagt
    10921 tgggtgtgga tgtcgtcctc gaatgtaccg gcttctttac caataaaacc aaagccgaag
    10981 cacacatcag ggccggcgcg cgcaaagtcg tgatttccgc acccggcggc aatgatgtga
    11041 aaaccgtcgt atatggcgta aaccaagaca ttttggacgg cagcgaaacc gttatctccg
    11101 ctgcttcctg caccaccaac tgccttgccc cgatggcggc agtcctgcaa aaggaattcg
    11161 gcgtagtcga aggcctgatg accaccatcc acgcctacac cggcgaccaa aacacccttg
    11221 acgcgccgca ccgcaaaggc gatttgcgcc gcgcccgcgc cgccgcgctc aacatcgtgc
    11281 ccaacagcac cggtgccgcc aaggccatcg gtctggttat ccctgaattg aacggcaaac
    11341 tcgacggctc cgcccaacgc gtccctgttg ccaccggctc gctgaccgaa ttggtttccg
    11401 tcctcgaacg ccctgtaacc aaagaagaaa tcaacgccgc gatgaaagcc gccgccagcg
    11461 aatcttacgg ctacaacgaa gatcaaattg tttcttccga cgttgtcggc atcgaatacg
    11521 gttcgctctt cgatgcgacc caaacccgcg tgatgaccgt gggcggcaaa caattggtga
    11581 aaactgttgc ctggtacgac aacgaaatgt cctacacctg ccaactcgtc cgcactttgg
    11641 aatactttgc aggcaaaatc taaggcttga acaaacctgt ggataagtaa atgccgtctg
    11701 aacacattgc gttcagacgg cattgtttat ctgtatagtg gattaaattt aaaccagtac
    11761 ggcgttacct cgccttgccg tactatttgt actgtctgcg gcttcgttgc cttgtcctga
    11821 tttaaattta atccgctata acttgatatt gcggcttatg gcgaacaaac aacagccgtt
    11881 tgttcaactg ctatgcggca aaaccggatt tttgcccgat ttaaagcggg gttggggaaa
    11941 gatcaataac ggttgcacgg ttttcctcga tttgaaatct gacttcgtaa tctgcaatat
    12001 tcatcacata aatccgttcg ggaatattct gataggcggg gcgcggatct tgggcaatgc
    12061 tttggctgat aaggtttttg gtgtttgcag ataaattttc cgcgccgatg ttttcctgcc
    12121 aaacgacttc caactctacg ggtttgccgc tgacgaaacc agatgcggca tcgggtttgg
    12181 attcgacaaa ggggatataa ggcttgatgt ccacaatcgg cgtgccgtcc agcaggtctg
    12241 cgccgctgca atagaggcgg acgggtttgc cggtttcgat gcgttcgagt ttcaggagcg
    12301 agagtccgag atggttgggg cggtgggggc tgcgcgtggc gaatacgccc attttttgtt
    12361 tgccgccgag ccgtggcggg cgcaccattt gtgcccagcc ttcatccaat acgccgtgaa
    12421 aaataaaact tatccacaca tagtcgaagt gttccagtcc gcgtacgctg tctgcggtaa
    12481 attcgggatt cagctcgatg catacttctg cggcagagac caaaccgggc tggcgggcga
    12541 tgccgaattt ctgtttgtag ggcgagcggg cggtgccgat gggggtaatg gtataagtca
    12601 taaggttgtg ggtaagtttt ttggaaaaac cttatcttat cacaatcggt tttaccgctt
    12661 ttgggcagta atttgttata atacagggca ttttaatcgc gttgaaataa tgagatgatt
    12721 gtttccattg atgttgatgc acaaaaaacg tttacgccac tgtgtcctga cgaactgccc
    12781 gtgaacgagg ggcatttgat tgtcgaggag ttgaatgctc aagccgcttt ggcggatttg
    12841 cgcgtgatga cgaaagatgc gcatcatatg gtagcgaaat ggcttgtgga taaccctgtt
    12901 gatatgttga agccgacagg tttgcctgat gcggatttga cttgggtggc tcatgcgatg
    12961 gtcggtacgc gcggctatga attattggac ggactgcctt gtgccaaaga atacgattat
    13021 tgcgtttgga aaggtgttga tcctgaattg catccttacg gcgcgtgttt tcacgatatt
    13081 gaggaaaaac tgagcacagg gctgattgaa tggctgcgtt gtcaaaatac ggatacggtc
    13141 attgtcggcg gcttggctac ggattattgt gtgaaaacaa cggttttgca gttgcttaaa
    13201 ggtggtaatt ggcaggttat cgtcaatgaa gcggcttgtc ggggtattgc gccggatacc
    13261 atcgaaacgg catggcagga aatgcgttct gccggtgctg tcatcttaaa aaacgccgaa
    13321 gaaattaaaa aacacattaa taatcaataa gttaaaattg tttcacgtga aacatacttc
    13381 ttaaaatatg aaaattttgc ttgtccgttt gtctagtatg ggcgatttaa ttcacacttt
    13441 gcccgcaatt gaggatttgg cgcgacaatg ccctggtgta gaactccatt ggctgtgtga
    13501 agctggattt acagatattg cgcgcctgca tccgtttgta aaaaaaatcc atgtgatgaa
    13561 atggcggcaa tggcgcaaac atctctttcg ggctgaaact tggcgggaaa tgggtcatct
    13621 gaaacagact ttgcggcagg aagtatttga tttcgtattg gacagtcaag gtctgattaa
    13681 aagcgcgtgt ttcgctaaaa tggcgaaatc ccctatttat ggtttggata aaaacagtgc
    13741 gcgcgaggga tgggctgctt tggcgtatgt aaaaacatac gctgtaccga agggaaaaaa
    13801 tgccgtttgg cgcaaccgtg aactgtttgc ccaagtattt gggtatgtaa tgccggaaac
    13861 gcaggtattt ggcttgactg ttcctgaagc aggccgtctg aaaaatttag cgcagccgta
    13921 ttatgcggct ttgcatgcga ccagtcggga cagtaagtta tggcctgtgg aaaactggcg
    13981 gtcgttgctg caaaagttga atgaagaaca gcaatgcaat atttacctgc cttggggaaa
    14041 tgaagatgaa aaaacgcgtg ccaaacaaat tgcagacgga ctgccgtttg ctattgtgtg
    14101 cgacaaaata aatttattgc aggcagcgta tctgctgaaa tacgcggtcg gaattgtcgg
    14161 cgtggatacc ggtttgctgc atttggcaaa tgccttggaa aaacctgtgg tcggcattta
    14221 taccgatacc gatccgatta aaacaggcgt tcaggtttcg ccaattgcaa aaaatttggg
    14281 caatatcggg cagattccga ccgcagattt ggtttatcaa gcgctgatgg attgtgttgc
    14341 agcagacaaa ggctaaaggg ttgtctgaaa ctgatatggc ggcatgatat tttccaattt
    14401 attaaataca ggaatgtgta tccgctagtc tgagtaaatg ctttaaaaat ggtataatcg
    14461 gcaagcatta tccgaaagat ttttgaatga attcgttttt aaggaaaacg gatttggttt
    14521 tatagggaag aaggtttggt ttcgctggat ggtgaaagca gcgttctttt taggagggtt
    14581 caatgaaagc actggtcgca gtaaagcgcg tagtggacta caacgtcaaa gttcgtgtaa
    14641 aagccgatgg ttcggatgtg gatatcggca atgtcaaaat gtcgatgaat ccgtttgacg
    14701 aaatcgctgt ggaagaagcc gtccgtttga aagaagccgg aaaagtaagc gagatcgtag
    14761 cggtttcttt gggcgaaaag aaatgcgaag aaacgttgcg taccgctttg gcgatgggtg
    14821 ccgaccgtgc aattcatgtt gaaaccgatg cgaaattgga gccgctggca gttgccaagt
    14881 tgctgaaagc cgttgcggac aaagaaaatc cgcagatttt ctttttgggc aaacaggcga
    14941 ttgatgatga tgccaaccaa gtggcgcaaa tgctggctgc tttgctgaat gcggcgcaag
    15001 gtacgttcgc gtccaaagta caaattgaag gcgacgaagt gcagattgtg cgggaaatcg
    15061 atggcggcga agaaaccatc gcattgaaac tgcctgctgt tatcagtgct gatttgcgtt
    15121 tgaacgagcc gcgctttgtc aaactcccca atattatggc ggcaaagaaa aaacctctgg
    15181 aaaaactggc gcctgccgat ttggctaccg atattttacc tcgtctgaaa acggtgaaat
    15241 ttgccgaacc taaggcgcgt caggcaggcg taaaagtagc aagcgttgcc gaattggttg
    15301 aaaaattgaa aaacgaagcc aaagtgattt gaggaggctg aaatgagcgt attgattatt
    15361 gtcgaacacg acaacaaaca gttgaatcct accactttgc atgctgttac cgctgccgcc
    15421 aagctgggta aagtcgattt attggttgcc ggaagcggtg catctgccgt agtagagtcc
    15481 gcaaaacaag tggcgggtgt ggaaaaagtt ttggttgcag atgctgccca ttatgccgaa
    15541 ggtttggctg aagagttggc tccgctggtt gttaaattgg cagcggatta ccgctatgtt
    15601 gcagcaacgg caaccacatt cggtaaaaac cttttgcccc gcgtagccgc cttattagac
    15661 gtaccgcaaa tttctgattt gaccgagatt gtagataaca cgacttttgt acgtccgatt
    15721 tatgcaggta atgcatttga aaccgtgcaa gccaatgcgg aaaaattggt gctgaccttc
    15781 cgtgcgacgg cttttgacgc agcggcggtg caaggtggta atgctgaggt aattaatatt
    15841 gaaacaaccc ctgcccaaaa cctgagtcgt tttgttaacc gtcagctttc ccattccgat
    15901 cgtcccgaac tgactcaggc aaaagtgatt gtttctggtg gtcgtgcgtt gggtagtgcg
    15961 gaaaaattta atgaagtgct gacaccgttg gcggatgttt taggtgcggc aatcggtgca
    16021 tcccgtgcgg cagttgatgc cgaatatgcg ccaaacgatg ctcaagtcgg acaaaccggt
    16081 aaagtagttg cgccgcaact ctattttgca atcggtattt caggtgcgat tcaacacgtt
    16141 gccggtatgc aagacagtaa ggtgattgtt gcaatcaata aagatgctga tgcgccgatt
    16201 ttcaatgtag ccgattacgg attggttggc gatttatttg aaatcgttcc acaattaaca
    16261 gaagcattga aaaattaatg tttcacgtga aactttcaga cgactttgtt attaatgagg
    16321 ttgtctgaaa acttttcaac atgattacga cttataaaac cattacttcc ccgacgcagg
    16381 ctgggtttaa agataaaggc agccgtttta tcgcatttgc ctatccgatt cggacattgg
    16441 ctgatgtgaa aaaatacctc gatccgttaa aggaagagca ccataaagca cgacactggt
    16501 gttatgccta tcgtttgggc gtggatggta tgcaatttcg tgccaacgat gatggagagc
    16561 catcaggaag tgctggacga ccaattttgg gacagattga ttcggtgggc atcaccgatg
    16621 ttttggtcgt ggtcgtccgc tatttcggtg gtactttatt gggcgtttca ggtctgatac
    16681 atgcgtacaa agaggcgacg gctcaggcgt tggcgattgc ggaagtgatt gaaaagaata
    16741 ttgaaaaaac cgtttggctg aaatgtgaat atccattttt gaatgaagcg atacgcatcg
    16801 ccaaacaata tcaggcggat atattggagc aggatttgca gttggattgc cgattgacgg
    16861 taagtttgtc gttggcaaat tatgaagtct gtgttgcggc ttggaagaat acacggcaga
    16921 ttgaagtaaa tacggaaaag ccttttgaat gaaaggtcgt ctgaaatgct ttgtgatggt
    16981 atttcagacg acctcttcgc tgactaatct tcttgtgtat atttgtctaa ggcatcgacg
    17041 ctggagcgca aatataacca agccagttga tggaattcgc ccagcgcgtt ccatagcgca
    17101 tcttcactca taatgctgta ttcgccttct gtgcgcaaat ccacctccgc tccatcttca
    17161 atagcccgat gacaagcctg atattcgtgg gtataaaaat tgtccatatc gcgaatcaaa
    17221 gcgacggcat gtttccaacg gcggatgtct tcttccaatt gcggtagtaa atgacaccat
    17281 tcgcggtatt tgctttggat ttcatcaata cgtttttgca tggttgcttg tcctttttta
    17341 atttgtgaat aagttgaata ggttgcagag tggaatgaag cggtcttttg tttgattcta
    17401 ctaaaatttc ttcagatggg ataaaagtcc ctttgtatcg agttttcgtt aaaagtacat
    17461 atttgtcaag gagatggcat gaaactgctg gttatcggta atggtggtcg cgaacacgcg
    17521 ctggcttgga aattggcgca gtcgcctaaa gtggaaacag tatttgttgc gcctggtaat
    17581 gccggtacag cgattgaacc caagttgcaa aacatcgact tgactgcgca tcaggatttg
    17641 attgaattct gtcgtaaaga aaatattgtt tttactgtcg tcggccctga agcgcctttg
    17701 gcggcaggtg ttgtggatga tttccgtgcc gcaggactaa aaatattcgg tccgacacaa
    17761 tatgcggcgc agttggaaag ttccaaagat ttcgccaaag catttatggc gaaatacaat
    17821 attccaaccg cgcaatatca aacctttgaa aacgccgatg ccgcacatga ttacgtcaat
    17881 cagaaaggtg cgcctatcgt tatcaaagcc gatggtttgg cggcaggtaa aggcgtgatt
    17941 gtggcgatga ctttggatga agcgcatgct gcgattgatg atatgctgct ggacaacaaa
    18001 atgggcaatg ccggcgcgcg tgttgtgatt gaagatttcc tgcaaggcga agaagcgagt
    18061 tttatcgtca tggttgatgg caataatgta ctgcctatgg caaccagcca agaccacaag
    18121 cgtcttttag acggcgacaa aggtctgaat acgggcggta tgggtgcgta cagccctgcg
    18181 cctgtggtaa cgcctgttgt gtacgaacgc gcgatgaatg aaattatttt gccgaccgta
    18241 gcagggatga aagcggaggg gcatgagttc accggtttcc tgtacgcagg tttgatgatt
    18301 gatcaaagcg gtgcacccta tacgattgag tttaactgcc gtttcggcga tcctgaaacc
    18361 cagccgatta tgagtcgtct gaacagcgac ttggcggatt tggttgaagc ggcaatagac
    18421 ggtaaacttg atagtgttgc tgccgaatgg aatccacaaa ctgccgtagg tgtagtgttg
    18481 gcggcgcaaa actatcctga aacgcctaaa aaaggcgatg ttatttccgg tctggatgct
    18541 gccaaccagg taggcaaagt tttccatgca ggtacaacgg caaacgagaa aggtgacgta
    18601 ttgaccaacg gcggacgcgt attgtgtgtt gtgggattgg gcgacaatgt ggcgcaagcg
    18661 aaagctaagg catatggcgc gttggaaaaa atcagcttcg acgggatgca ataccgtaaa
    18721 gacattgccg ataaagcgat taaccgttaa ttagaaagag gatgatgccg tctgaagcca
    18781 agtatgactg atatgcttca gacggcattt tatattatgt tatttccgag aattatcgct
    18841 gcatcagcgc aacgtaagtt aagcgtttat ttaaaaaaag gcggtttggt cgcttatccg
    18901 accgaatctt gttatggctt ggggtgtctt ccgacattag ccaaagcact cggtaagttg
    18961 gcgcatttga aaaaaagacc gcaacacaag ggtatgattg tcatcgggaa tcaatttgaa
    19021 caattgcagc ctttacttca aatgccgtct gaaaatcttc aggatatgct tagaaaagaa
    19081 tggcccgccc ctaaaacgtt cctattatcc gccaaatcct gtgtcttacc tgagttgcgc
    19141 gggaaacagc gcagcaagtt ggcggtcagg gttcccgccc atgtaggtgc gcgccgcttg
    19201 tgtcgggctt tgcaaacgcc tttggtttcg acttcgtgca accgcgcagg caaacgcgcg
    19261 tgtcggacgg agagggaagt cagaaggcaa ttcggacgcg atgtgtggat tgttggtggg
    19321 agaatcggca ggcagaaatc gccgagtcag attattgacg gggaaacagg taaacgtttg
    19381 cg
//
LOCUS       DAWITQ010000023        17612 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.023, whole genome shotgun sequence.
ACCESSION   DAWITQ010000023 DAWITQ010000000
VERSION     DAWITQ010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17612)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17612)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17612
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.023"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..1184)
                     /locus_tag="WIX18_000681"
     CDS             complement(<1..1184)
                     /locus_tag="WIX18_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEZ5237825.1"
                     /translation="MFHSVNVFTGETLYRRPAQDYAEFERRLADLKMRGGAFAQLGVT
                     ERAARLQKFADRLEAEKERFAEMVCEEVGRCLHECRAEIGKSIELIRYYARLAPELLA
                     HKTIATQASLSQVRFEPLGVVFAVMPWNYPVWQVLRFAVPAMCAGNACAVKPAPSVAR
                     VSQALFDLASDGIPLAGVWLDEAGTLKAVEDTDAMAFTGSTYTGRILAAHAGANLKKT
                     VLELGGSNAFIVMPDADLERAAAEACYSRFRDAGQSCNAAKRIIVTEAAADRFITLFL
                     AECAKLKMGDPKHPDTTLAPLHREDLRDRVHGQVEDAVSNGAVCLTGGKIPQGRGWFY
                     PATVLDRVNPACRVWREEVFGPAALILRAENEEHAIRLANDSPFGLGACIYTADTGCA
                     WR"
     gene            complement(1189..1842)
                     /locus_tag="WIX18_000682"
     CDS             complement(1189..1842)
                     /locus_tag="WIX18_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HEZ5237826.1"
                     /translation="MGLGMEIGKLIVAFLVLINPFSALSLYLDLTNGHSTKERRKVAR
                     TAAVAVFAVIAVFALIGGTLLKVLGISVGSFQVGGGILVLLIAISMMNGNDNPAKQNL
                     GAQPETGQVRPARNAGAIAVVPIAIPITIGPGGISTVIIYASAAKTYSDIALIIVAGL
                     VVSAICYAILIVAGKVSRLLGATGLTILNRIMGMMLAAVSVEIIVSGLKTIFPQLAG"
     gene            1993..2283
                     /gene="gatC"
                     /locus_tag="WIX18_000683"
     CDS             1993..2283
                     /gene="gatC"
                     /locus_tag="WIX18_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEZ5237827.1"
                     /translation="MALTLADVDKIARLSRLHLTAEEKEKSLQELNDIFTMVEQMQTI
                     NTDGIEPMAHPHEAALRLREDEVTETDRAAEYQAGAPEVRNRLYIVPQVIEE"
     gene            2346..3791
                     /gene="gatA"
                     /locus_tag="WIX18_000684"
     CDS             2346..3791
                     /gene="gatA"
                     /locus_tag="WIX18_000684"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HEZ5237828.1"
                     /translation="MTQYTLKQASVLLQSKQISAVELASAYLAAIAEKNPALNGYITI
                     DQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASKMLDNFISPYTA
                     TVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGGSSGGSAAVVA
                     ARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAE
                     DCAILLNAMAGFDPKDSTSLEREKEDYTRDLNQPLKGVKIGLPKEYFGEGNSADVQTA
                     LQNTINLLKTQGAELVEVSLPQTKLSIPAYYVLASAEASTNLSRYDGVRYGHRAAQFG
                     DLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLRRLVADDFQTAFSR
                     CDLILAPTAPTAAPKIGADASPVETYLSDIYTIAVNLAGLPALTLPAGFSGGGLPVGV
                     QLVGNYFAEAKILGAAHQIQLNSDWHGKRPE"
     gene            3788..4720
                     /locus_tag="WIX18_000685"
     CDS             3788..4720
                     /locus_tag="WIX18_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK/YbjX family protein"
                     /protein_id="HEZ5237829.1"
                     /translation="MKQNRTFTFPDFRTVYSYAPLYRLQHLKYTLRKFFGKKEIYAFE
                     QFVNASPIRQGLFLHCPQNAYPLLREFVDRRFNCKRRLDAMTADFLMAEKLFGTDILH
                     QMEDYRFHLVLAHLSDGISLWLNRNDNCVEEGAWSLSLRDEAGNRLYMATFAFVGTHL
                     LTASVQGPAGEEAKDTVRRITKQLHGLRPQQLMVTALQYFAAVLGLDGAMGIAQKHQV
                     KLRWKLKKRVKMNYDAFWQEYGASLERDGYWHLPQTPARKDLTDIESKKRSMYRKRYE
                     MLDNMVAEMKDGLKTEARGISDGIQTEKPLRRTA"
     gene            4763..6193
                     /gene="gatB"
                     /locus_tag="WIX18_000686"
     CDS             4763..6193
                     /gene="gatB"
                     /locus_tag="WIX18_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEZ5237830.1"
                     /translation="MTWETVIGLEIHVQLNTKSKIFSGASTAFGAEPNAHAGVVECAL
                     PGVLPVMNREVVEKAIKLGLALDAKINRKNVFDRKNYFYPDLPKGYQISQLDLPIVEH
                     GKLEIVVGDDVKTINVTRAHMEEDAGKSVHEGLNGATGIDLNRAGTPLLEVVSEPEMR
                     SAAEAVAYAKALHSLVTWLNICDGNMAEGSFRVDANVSVRPKGQAEFGTRREIKNLNS
                     FRFLEQAINYEAEAQIEILEDGGKVQQATMLFDPEKGETRVMRLKEDAQDYRYFPDPD
                     LLPVIISDAQMQKAKAEMPELPKEMAARFVADYGVSEYDARLLTASRAQAAYFEEAAK
                     ESGQGKPTANWMNGELAAALNKEGMELADSPITAPRLAALVGKIADGTLSSKLAKKAF
                     EAMWAEPEATIAEIIEKHGLQQMTDTGAIEAMVDEVLANNAKAVEQFKSGNEKALNAI
                     VGQVMKASKGKANPAQVQELIKAKLA"
     gene            6285..7295
                     /locus_tag="WIX18_000687"
     CDS             6285..7295
                     /locus_tag="WIX18_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster binding
                     domain-containing protein"
                     /protein_id="HEZ5237831.1"
                     /translation="MNHTVTLPDQTTFAANDGETVLAAAARQNLNLPHSCKSGVCGQC
                     KAELVSGDIQMDGHSEQALSEAEKAQGKILMCRTTAQSDISINIPGYKADALPVRTLP
                     ARIESIIFKHDVALLKLALPKAPPFAFYAGQYIDLLLPGNVSRSYSIANPPDQEGILE
                     LHIRRRKNGVCSEMIFGSEPKVKEKGIVRVKGPLGSFTLQEDSGKPVILLATGTGYAP
                     IRSILLDLIRQNSSRAVHFYWGARHQDDLYALEEAQGLACRLKNACFTPVLSRPGEGW
                     QGRKGHVQDIAAQDHPDLSEYEVFACGSPAMTEQAKNLFVQQHKLPENLFFSDAFTPS
                     AS"
     gene            complement(7424..8056)
                     /gene="pdxH"
                     /locus_tag="WIX18_000688"
     CDS             complement(7424..8056)
                     /gene="pdxH"
                     /locus_tag="WIX18_000688"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HEZ5237832.1"
                     /translation="MDLHNIREDYSKRELSEGDCADNPIEQFERWLDEAVRAQVNEPT
                     AVNVAAVDGRGRPNSRMVLLKEVNSEGFVFFTNYHSRKGRSLDAHPFAAMTFFWPELE
                     RQVRVEGRVERLAEKLSDEYFESRPYQSRLGAWASAQSEVIPNKAVLVAKAAAVGLKH
                     PLHVPRPPHWGGYIVIPDLIEFWQGRPSRLHDRIQYRLLDGGWIRERLSP"
     gene            8287..9336
                     /locus_tag="WIX18_000689"
     CDS             8287..9336
                     /locus_tag="WIX18_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEZ5237833.1"
                     /translation="MSKQPTSKRQWRDGVAPSAKKTAKPFKSKARPKDETDKTASQPY
                     GQKASDGIKPQNLPKQRAAKAKKLVVRNPNQKIMEHARDLKERRSDLSRMEPERLQKV
                     LAASGVGSRREMEEWINNGWVTVNGKTAQLGDKVTPDDHVTVKGSIIKLKWADRLPRI
                     ILYYKQEGEIVSRDDPQGRVSIFDRLPQAASSRWVAIGRLDINTSGLLILTTSGELVQ
                     RFAHPSFEVEREYAVRVLGGLTGEQMRVLTEEGVMLEDGLAKVERIREQGGEGANKWY
                     NVVIKEGRNREVRRIFESQGLTVSRLVRVGFGPIGLPNRLKRGQFYELNPAEVANIIK
                     WADMLLPGERRRKKA"
     gene            complement(9405..10946)
                     /locus_tag="WIX18_000690"
     CDS             complement(9405..10946)
                     /locus_tag="WIX18_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OFA family MFS transporter"
                     /protein_id="HEZ5237834.1"
                     /translation="MKFLDREASIAKPGFNRWLVPPAALAVHLAIGQIYAYSVFNAPL
                     TKLIGITESAAGDWKLTTVGWIFSIALAMLGASAALFGTWMERVGPRKAIFAAACCFS
                     LGFFVSAFGVSTHNLFLLYLGNGVIGGVGLGLGYIGPVSTLMKWFPDKPGMATGLAIM
                     GFGGGAMLASPLSVSLMNAFSNAASVGVVETFAVLGLLYLALMMFGAFTIRVPADGWK
                     PEGYIAPKTQNKLVSSNHVNVSQAMKTPQFWLLFWVLCLNVTAGIGVLGQASVMIQEL
                     FSETSIGRQAAVGAGAAAGFVSLLSLFNMGGRFLWSSVSDKIGRKNTYTIFFVLGSLL
                     YFAVPSIGEGGSKALFIIGFCVIISMYGGGFAAIPAYLKDLFGTYQVGAIHGRILLAW
                     STAAVIGPVLVNYIRQSQIDSGIPAAQAYSVTMYIMAGLLIIGLLCNLAVKSVHEKHH
                     EKDIKTAAHSGNPDDETAISDAYLVGEKVSGGGISVWWRWALAVIPLAYGVVMVFVKA
                     LDLFS"
     gene            complement(11239..12594)
                     /locus_tag="WIX18_000691"
     CDS             complement(11239..12594)
                     /locus_tag="WIX18_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEZ5237835.1"
                     /translation="MSDFFHSDVLSVSELNAFAKSILENHLAGLWIAGEVSNLTRAAS
                     GHYYFSLKDSRAQVRCAMFKGAAARLAKPLKEGDHIEVAGKISIYETRGEFQITVNEV
                     RLKGLGQLYEAYERLKAQLQAEGAFAEERKKPLPVRPQCIGIVTSLAAAALRDVVTTL
                     KRRAPEIPVIVYPTPVQGTGSEFQIAQAIKTASQRAECDVLIVCRGGGSIEDLWAFNE
                     EPVVRAIEACTVPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQ
                     AQGRLKTVLEQRYFDASQKLDWLARQIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRA
                     HTARFERQTQALQHYRPDVSVCKNNIVRLQTALPAAFSQLLTHRRQSLTAQAALLEAV
                     SPQHILERGFSVVKDTRGQVIRNADVLKQGQKLHITFADGETDVRVSKEQGQQDLFDC
                     I"
     gene            12791..13612
                     /gene="nadE"
                     /locus_tag="WIX18_000692"
     CDS             12791..13612
                     /gene="nadE"
                     /locus_tag="WIX18_000692"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HEZ5237836.1"
                     /translation="MMRIFSTGGTMDTQAVITHIARWLDEYATQANAKGFVIGVSGGI
                     DSAVVSTLAARTGRPTLLLDMPIRQHPGQLERARLHIRNLQRQYANVSAQTADLTDTF
                     QTFEQTVGIHQTAFDNQPLSLANAKSRLRMLTLYYYGQIHGLLVTGTGNKIEDFGVGF
                     FTKYGDGGVDISPIADLTKTQVYRLAEALGVDEAIQKAPPTDGLWDTERTDEEQMGAS
                     YPELEWAMGVYGTRKPEDFEGRQREVLEIYTRLHRAMQHKINPIPVCRIPPELLG"
     gene            complement(13683..14156)
                     /locus_tag="WIX18_000693"
     CDS             complement(13683..14156)
                     /locus_tag="WIX18_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEZ5237837.1"
                     /translation="MTDFSVWETAPFGATVDYILQRYHNVHRAQFEELVPLAQKVVQV
                     HADTFPAEIARLLADMQNELLMHMMKEERMLFPMINQGVGRGAAMPISVMMHEHEEHD
                     RAIARLKELTDNFQPPEGACGSWTRLYALAKEMVEDLNDHIHLENDILFARVLDS"
     gene            14454..14786
                     /gene="trxA"
                     /locus_tag="WIX18_000694"
     CDS             14454..14786
                     /gene="trxA"
                     /locus_tag="WIX18_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxA"
                     /protein_id="HEZ5237838.1"
                     /translation="MSSELIIHTSDAAFEKDVLNSDTPVLLDFWAPWCGPCKMIAPIL
                     DDIAAEFEGRLKVVKINIDDNEATPSRFGVRGIPTLMVFKNGEVVATKVGALAKGQLT
                     AFVEASIA"
     gene            complement(14839..15786)
                     /locus_tag="WIX18_000695"
     CDS             complement(14839..15786)
                     /locus_tag="WIX18_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ5237839.1"
                     /translation="MTDITPFANRLGKNIKHLMKWVKRNGIEAWRIYDRDIPQFPFAA
                     DVYGDRIHLQEYDTGWLMRPEEYEAWLAEVLEAVAFVTGFAPEQIRLKRRERQKGLQQ
                     YEKTGKAGDDFVITENGRKFWVNLDKYLDTGLFLDHRNTRKKVGETAAGKRFLNLFSY
                     TGSFTVYAATGGAASSETVDLSNTYLDWAKRNFELNGIDTERHKIVRADVFQYLQTAY
                     GEGRRFDLIVMDPPSFSNSKKMLDILDIQRDHKKLIDGAVKLLASDGILYFSNNLSSF
                     VLDDLVSEQYAVKDISKQSVPEDFRNKKIHRCWEIRHKS"
     gene            16114..17502
                     /locus_tag="WIX18_000696"
     CDS             16114..17502
                     /locus_tag="WIX18_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEZ5237840.1"
                     /translation="MSIKFADLNLDKNILSAVSSEGYESPTPIQAQAIPFALEGRDIM
                     ASAQTGSGKTAAFLLPTLQKLTKRSEKPGKGPRALVLTPTRELAAQVEKNALAYAKNM
                     RWFRTVSIVGGASFGYQTRALSKPVDLIVATPGRLMDLMQSGKVDFERLEVLILDEAD
                     RMLDMGFIDDIETIVEATPSDRQTLLFSATWDGAVGKLARKLTKDPEIIEVERVDDQG
                     KIEEQLLYCDDMRHKNRLLDHILRDANIDQCVIFTSTKAMTEVIADELYEKGFAANCL
                     HGDMPQGWRNRTLMDLRKGRCKILVATDVAARGIDVPTITHVINYDLPKQAEDYVHRI
                     GRTGRAGRTGIAITFAEVNEYVKVHKIEKYINRKLPELTIEGMEPTRKRKSAGGKPKG
                     KGGWGDRKSGGWRGDHKPSKEGFGGKTRGEGFKKEGFKRDGFKKTGEGFKGKRKAGDS
                     FAGKGERRYKDR"
BASE COUNT         4399 a         5154 c         4468 g         3591 t
ORIGIN      
        1 aaccgccagg cgcatccggt atcggcggta taaatgcagg caccgagccc gaacggggaa
       61 tcattggcaa ggcggatggc atgttcttcg ttttcggcgc gcaaaatcag ggcggccggc
      121 ccgaatactt cttctctcca gacgcggcag gcaggattta ccctgtctaa aaccgtcgcg
      181 ggataaaacc agcctcgccc ttgtgggatt tttccgccgg tcaggcatac cgcgccgttt
      241 gaaacggcat cttcaacctg cccgtgaacc ctgtcccgca aatcttcgcg gtgcagcggt
      301 gcaagcgtag tatcgggatg tttggggtcg cccattttca atttagcgca ttcggcaaga
      361 aacagcgtga taaaacgatc ggctgcggct tcggttacga tgatgcgctt ggcggcgtta
      421 cacgattgcc ccgcatcgcg gaaacgggaa taacaggctt ctgcggcggc acgctccaaa
      481 tcagcatcgg gcatcacgat aaaggcgttg ctaccgccga gctccaacac ggttttctta
      541 aggtttgcgc ccgcgtgtgc cgcaaggatg cgccccgtat acgttgaacc ggtaaacgcc
      601 attgcatcgg tatcttcaac cgccttgagc gtgcccgcct catccagcca cacgcctgcc
      661 agaggaatgc cgtctgaagc caaatcgaac agtgcctgac tgacgcgtgc cacgctgggc
      721 gcgggtttga cggcgcacgc gttgcccgcg cacatagcgg gaacggcgaa acgcaatacc
      781 tgccagacgg gatagttcca aggcatgacg gcaaacacca cgcccaaagg ctcgaagcgc
      841 acctgactca aactcgcctg cgtcgcgatg gttttgtggg caagcagttc gggggcaagg
      901 cgggcgtaat agcgtatcag ttcgatagac ttgccgattt ccgcacggca ttcgtgcaag
      961 cagcgtccga cttcctcaca caccatttcc gcaaaacgct ctttctccgc ctccaaacgg
     1021 tcggcaaatt tttgcaggcg cgcggcacgt tcggttacgc ccagttgcgc gaacgccccg
     1081 ccgcgcattt tcaaatccgc cagccgccgt tcaaactccg cataatcttg agctggacgg
     1141 cggtaaagcg tttcgcccgt aaatacattg acactgtgaa acatcgaatc aacctgccag
     1201 ttgcgggaat atcgttttca gtcccgacac aataatctcc accgataccg ccgccagcat
     1261 catacccatg atacggttta aaatcgtcag ccccgtcgcg cccagcaggc ggctgacctt
     1321 cccggcaacg attaaaatgg cataacaaat cgcactgacc accaaaccgg ccacgataat
     1381 cagcgcgatg tcgctgtacg ttttggctgc cgaagcgtaa ataatcacgg tcgaaatacc
     1441 gcccgggccg atggtgatcg gtatggcgat gggcacgacg gcaatcgctc cggcattgcg
     1501 ggcggggcgc acctgccccg tttccggctg cgcgccgaga ttctgcttgg cgggattgtc
     1561 gttgccgttc atcatcgaaa tggcaatcag caacaccaaa attccgccgc cgacctgaaa
     1621 cgaaccgacg ctgatgccca aaaccttcag cagcgtaccg ccgatcagcg caaataccgc
     1681 aatcacggca aacacggcaa cggcggccgt ccgcgcgacc ttcctgcgct ccttcgtgct
     1741 gtgcccgttg gtcaggtcaa ggtaaagcga caacgcgcta aacggattaa tcagcaccaa
     1801 aaaagccaca atcagcttgc cgatttccat gcccaatccc attatttccc cctccttcaa
     1861 acccgtgcgg caggcatccg atgctgcaaa ttgccgccgc aacggatttt tccgttataa
     1921 ttaaaaattc aagcaatacg ccccatcata cccgaacgac ggtatcttta ccatcagaca
     1981 aggatgcttt tcatggcact gacacttgcc gacgtagaca aaatcgcccg actctcccga
     2041 ctgcacctga ctgcggaaga aaaagaaaaa tcgcttcaag aattaaacga cattttcact
     2101 atggtcgaac agatgcaaac catcaacaca gacggcatcg aaccgatggc gcacccgcac
     2161 gaggccgccc tgcgcctgcg cgaagacgaa gtaaccgaaa ccgaccgcgc cgccgaatat
     2221 caggcgggtg ctccggaagt acgcaaccgt ctgtacatcg taccgcaagt tatcgaagaa
     2281 taatccgaat atgcttcaga cggcatcagc aataccgccc gaagcccttt aaggatggaa
     2341 gatttatgac ccaatacaca ttgaaacagg caagcgtcct gttgcagtcc aaacagattt
     2401 ccgccgtcga actggcaagc gcataccttg ccgccatcgc cgaaaaaaat cccgccctca
     2461 acggctatat caccatcgac caagataaaa cccttgcaga agcccgtgcc gccgacgaac
     2521 gtatcgcgca gggcaacgcc tccgcgctta ccggcgtacc cgtcgcctac aaggatattt
     2581 tctgccaaac cggctggcgc agcgcgtgcg cttccaaaat gctcgacaac ttcatctccc
     2641 cctacaccgc caccgtcgtc caaaacctgc tcgacgaagg tatggtaacg ctcggccgca
     2701 ccaatatgga tgagttcgct atgggttcga ccaatgaaaa ctcattctac ggtgcagcca
     2761 aaaacccatg gaatcttgag cacgtccccg gcggttcgtc aggcggttcc gccgccgtcg
     2821 ttgccgcgcg cctcgcccct gccgcgctcg gttcggacac cggcggctct atccgccagc
     2881 ctgcatcgca ctgcggcatt accggcatca aacccacata cggcacggtt tcccgcttcg
     2941 gtatggtcgc ctacgcctcc agcttcgacc aggccggtcc gatggcgcaa accgccgaag
     3001 actgcgcgat tctgttgaac gcgatggcag gtttcgaccc caaagactcc accagcctcg
     3061 aacgcgaaaa agaagactac acccgcgatt tgaaccaacc gctcaaaggc gtgaaaatcg
     3121 gcctgcccaa agaatatttc ggcgaaggca acagcgccga tgttcagacg gcattgcaaa
     3181 atactatcaa cctcctcaaa acccaaggcg cggaattggt cgaagtttcc ctgccgcaaa
     3241 ccaagctgtc catccccgcc tactacgtcc tcgcctccgc agaagccagt accaaccttt
     3301 cacgttacga cggcgtacgt tacggacacc gtgccgccca attcggcgat ttggaagaaa
     3361 tgtacggcaa aacccgcgcc gaaggtttcg gcagcgaagt taaacgccgc atcatgatcg
     3421 gcacttatgt actgtcacac ggctactacg atgcctacta tctcaaagcc caaaaactgc
     3481 gccgcctcgt tgccgatgat tttcagacgg cattttcacg gtgcgacctc atcctcgcgc
     3541 cgaccgcacc cactgcagcc ccaaaaatcg gagcggatgc ttcgccggtt gaaacctact
     3601 tgagcgatat ctacaccatc gccgtcaacc tcgccggact gcccgcattg accctgcccg
     3661 caggcttcag cggcggcgga ctgcccgtcg gcgttcagct tgtcggcaac tacttcgccg
     3721 aagccaaaat cctcggtgcg gcgcatcaaa tccaactcaa cagcgattgg cacggcaaac
     3781 gacccgaatg aagcagaacc gcacctttac cttccccgat tttcgcaccg tttacagcta
     3841 tgcgccttta tatcggctgc aacatttaaa atacacattg cgaaaatttt tcggaaaaaa
     3901 agaaatttac gccttcgagc agtttgtcaa cgcatcccct atccgtcagg ggctgttcct
     3961 ccactgcccg caaaatgcct atccgctgct gcgcgaattt gttgacaggc gttttaactg
     4021 caaacgccgt ttagatgcga tgacggcaga ttttctcatg gcggaaaaac tgttcggcac
     4081 agacatcctg caccaaatgg aagactaccg cttccatttg gtcttggcgc acctttcaga
     4141 cggcatcagc ttgtggctca accgcaacga caactgcgtc gaagaaggcg cgtggtcttt
     4201 atctttgcgc gacgaagcag gcaaccggct gtatatggcg accttcgcct ttgtcggcac
     4261 acacctgctg acagcctccg tacaagggcc ggcgggtgaa gaagccaaag acaccgtccg
     4321 ccgcataacc aaacaactcc acggcttgcg tccccaacaa ctgatggtaa ccgccctgca
     4381 atatttcgcc gccgtactcg gcttggacgg cgcaatgggc attgcacaaa aacatcaggt
     4441 caaactgcgc tggaaactta aaaagcgtgt caaaatgaat tacgacgcat tctggcagga
     4501 atacggcgca agtttggaac gggacggcta ctggcatctc ccccaaaccc ccgcccgcaa
     4561 agaccttacc gacatcgaaa gcaaaaaacg ctcgatgtac cgcaagcgtt atgaaatgct
     4621 ggacaatatg gttgcagaga tgaaggacgg tctgaaaaca gaagcacgcg gcatttcaga
     4681 cggcatccaa acggaaaaac cgctccgccg gacagcctga cgcgaagact atcgaattga
     4741 tattttagag aaagaagctc ttatgacctg ggaaaccgta atcggcttgg aaatccacgt
     4801 ccaattgaac accaaatcca aaatcttcag cggcgcatcg accgcattcg gcgcagaacc
     4861 caacgcgcac gccggcgtag tggaatgtgc tttgccgggc gtactgccgg taatgaaccg
     4921 agaagtcgtt gaaaaagcca tcaaattagg cttggctttg gatgcgaaaa tcaaccggaa
     4981 aaacgtgttc gaccgtaaaa actacttcta tcccgactta ccaaaaggct atcaaatcag
     5041 ccagttggac ttaccgattg tcgaacacgg caaattggaa atcgtagtcg gcgacgatgt
     5101 gaaaaccatc aacgtaaccc gcgcccatat ggaagaagac gcgggcaagt ccgtacatga
     5161 aggcttgaac ggcgcgaccg gtatcgattt gaaccgcgcc ggcacgcctt tattggaagt
     5221 cgtatccgaa cccgaaatgc gctccgccgc cgaagccgtt gcctacgcca aagccttgca
     5281 cagcttggta acctggctga acatttgcga cggcaatatg gcggaaggtt cgttccgcgt
     5341 cgatgccaac gtatccgttc gcccgaaagg tcaagcggaa ttcggcacgc gccgcgagat
     5401 taaaaacctc aattccttcc gtttcttgga gcaggcgatt aattacgaag cagaagcgca
     5461 aatcgagatt ttggaagacg gcggcaaagt acagcaggca acgatgctgt ttgatcccga
     5521 aaaaggcgaa acccgcgtaa tgcgcctgaa agaagacgcg caagactacc gctacttccc
     5581 cgaccccgat ttgctgcccg tcatcatttc agatgcccaa atgcaaaaag ccaaagcaga
     5641 aatgcccgag ctgccgaaag aaatggcagc gcgtttcgtg gcggactacg gcgtgtccga
     5701 atacgacgcg cgcctgctca ccgcaagccg cgcacaggcc gcctattttg aagaagccgc
     5761 caaagagagc ggacaaggca agccgactgc caactggatg aacggcgaac tcgccgccgc
     5821 actgaacaaa gaaggcatgg aacttgccga cagcccgatt accgctccgc gcctcgccgc
     5881 gctggtaggc aaaatcgccg acggcacatt aagcagcaaa ttagcgaaaa aagcctttga
     5941 agccatgtgg gcagaacccg aagccactat tgccgaaatc atcgaaaaac acggtttgca
     6001 gcaaatgacc gataccggcg cgattgaagc catggtggac gaagtgctgg caaacaacgc
     6061 caaagccgtg gaacagttca aatccggcaa cgaaaaagcc ctgaatgcga ttgtgggaca
     6121 agtgatgaag gccagcaaag gcaaagccaa ccccgcgcag gttcaagagc tgattaaagc
     6181 caaacttgcc tgacaagcaa gatgccgtct gaaacccaaa tccgacgttc agacggcatt
     6241 ttcacagtct gaccacatta aaacagcata aaaaacaata ttccatgaac cacaccgtta
     6301 ccctgcccga ccaaaccacc tttgccgcca acgacggcga aaccgttttg gccgctgccg
     6361 cccgacaaaa cctcaacctg ccccattcct gcaaaagcgg tgtctgcgga caatgcaaag
     6421 ccgaactggt cagcggcgat attcaaatgg acggacactc ggaacaggct ttatccgaag
     6481 cagaaaaagc gcaaggcaag attttgatgt gccgcaccac cgcgcaaagc gatatcagca
     6541 tcaacatccc cggctacaaa gccgatgccc tacccgtccg caccctgccc gcacgcatcg
     6601 aaagtattat tttcaaacac gatgtcgccc tcctgaaact tgccctgccc aaagccccgc
     6661 cgtttgcctt ctacgccggg caatacattg atttactgct gccgggcaac gtcagccgca
     6721 gctactccat cgccaatccg cccgaccaag aaggcatttt ggaactacac atccgcaggc
     6781 gcaaaaacgg tgtctgctcg gaaatgattt tcggcagcga acccaaagtc aaagaaaaag
     6841 gcatcgtccg cgttaaaggt ccgctcggtt cgtttaccct gcaggaagat agcggcaaac
     6901 ccgtcatcct gctggcaacc ggcacaggct acgcccccat ccgcagcatc ctgctcgacc
     6961 ttatccgcca aaacagcagc cgcgccgtcc atttctactg gggcgcgcgt catcaagatg
     7021 atttgtatgc cctcgaagaa gcacaagggt tggcatgccg tctgaaaaac gcctgcttca
     7081 cccccgtatt gtcccgcccc ggagagggct ggcagggaag aaaagggcac gtacaagaca
     7141 tcgcggcaca agaccacccc gacctgtcgg aatacgaagt atttgcctgc ggctctccgg
     7201 ccatgaccga acaagcaaaa aatctgtttg tgcaacagca taagctgccg gaaaacttgt
     7261 ttttctccga cgcattcacg ccgtccgcat cataattccc cggtataaaa aagattcagg
     7321 ctttccgttc ggaacacaaa aaacttcccg tccgtatttt ccccataaaa aatgccgtct
     7381 gaagcccgat tccggttttc agacggcata tgttttttcc tgttcaaggc gacagccgct
     7441 cgcgtatcca gccaccatcc agcaaacggt attggatgcg gtcgtgcagc ctgctcggcc
     7501 tgccctgcca aaactcaatc aaatcgggaa tcacaatata gccgccccaa tgcggcggac
     7561 gcggcacgtg caaaggatgt ttgagtccga ccgccgccgc ctttgccacc aataccgcct
     7621 tgttcggaat cacctcgctc tgcgcacttg cccacgcacc caaacggctc tgatacgggc
     7681 ggctctcaaa atattcgtcc gacaacttct ccgccagcct ttcaacacgc ccttccacgc
     7741 gcacctgacg ctccagctcc ggccaaaaaa acgtcatcgc cgcaaatgga tgagcatcca
     7801 gcgaacgtcc cttacggctg tgataattcg taaagaaaac aaaaccttca gaattaactt
     7861 ccttcagcag caccatacgg ctgttgggtc tgccgcgtcc gtcgaccgcc gccacattaa
     7921 ccgccgtcgg ctcgttgacc tgtgcgcgta ccgcctcgtc caaccaccgc tcgaactgct
     7981 cgatcggatt gtcggcgcaa tcgccttccg acaattcccg tttactgtaa tcttcccgaa
     8041 tattgtgcaa atccatttac cgctcctctt gtcatttgaa agattctacc cccgcacgca
     8101 aaccgatttc aaccgttgca caaactttgc ctcgcttctc caaacctcag gacacaacga
     8161 tttcatccgc aaaaccgccg cataaggtac aatatcgaac cgtccgaccg agggcggcat
     8221 tttatcaacc cgtcctgccg cacacgccgc agaagaaccg ccttatcagg cgagttagga
     8281 aaaatgatgt ccaaacagcc caccagcaaa cgccaatggc gcgacggcgt agccccgtct
     8341 gccaagaaaa ccgccaaacc tttcaaaagc aaagcccgtc ccaaagacga aacggacaaa
     8401 accgcatccc aaccttacgg acaaaaagct tcagacggca tcaaacctca aaacctcccc
     8461 aaacagcgcg ccgccaaagc caaaaaactc gtcgtccgca atcccaacca aaaaattatg
     8521 gaacacgcgc gcgatttaaa agaacgccgc agcgacctat cgcgcatgga acccgaacgc
     8581 ctgcaaaaag tgcttgccgc gtccggcgtc ggctcgcgcc gcgaaatgga agaatggatc
     8641 aacaacggct gggtaacggt caacggcaaa accgcgcaac tgggcgacaa agtcaccccc
     8701 gacgaccacg ttaccgtcaa aggcagcatc atcaaactca aatgggccga ccgcctgccg
     8761 cgcatcatcc tatattacaa acaagaaggc gaaatcgttt cccgcgacga cccgcaaggc
     8821 cgcgtcagca tattcgaccg cctgccgcag gccgccagca gccgctgggt cgccatcgga
     8881 cgcttggaca tcaacaccag cggacttctg attctcacca cctccggcga actcgtccaa
     8941 cgtttcgccc accccagctt cgaagtcgaa cgcgaatacg ccgtgcgcgt cttgggcggg
     9001 ctgaccggcg aacaaatgcg cgtcctcacc gaagaaggcg tgatgctcga agacggcttg
     9061 gcaaaagtcg aacgcatccg cgaacaaggc ggcgaaggcg cgaacaaatg gtacaacgtc
     9121 gtgattaaag aaggccgcaa ccgcgaagtg cgccgcattt ttgaaagcca agggctcacc
     9181 gtcagccgcc tcgtgcgcgt cggcttcggt cccatcggac tgcccaaccg cctcaaacgc
     9241 gggcagttct acgaactcaa ccccgccgaa gtcgccaaca tcatcaaatg ggcggacatg
     9301 ctgctgccgg gcgaacgccg ccgcaaaaaa gcctaaaccc gccaaaacac aaaaatgccg
     9361 tctgaaacat ctgctgtttc agacggcatt ttattcgggc gttttcagga gaaaaggtcg
     9421 agtgctttga caaagaccat caccacgccg taggcgagcg gtatgacggc caatgcccaa
     9481 cgccaccaga ccgatatgcc gccgccggaa actttttcgc ccacaaggta agcgtcggat
     9541 atggcggttt cgtcatcggg gttgccgctg tgtgcggcgg ttttgatgtc tttttcgtgg
     9601 tgtttttcgt gtacggattt gacggcgagg ttgcacaaca aaccgataat cagcagaccc
     9661 gccatgatgt acatggttac gctgtatgcc tgtgccgccg gtatgccgct gtcgatttgg
     9721 ctttggcgta tgtaattgac cagtaccggg ccgatgacgg cggcggttga ccaggccagc
     9781 aggatgcgcc cgtgaatcgc gccgacctga taggtgccga acaggtcttt caggtaggcg
     9841 ggaatggcgg caaatccgcc gccgtacatg gaaataatca cgcaaaagcc gatgatgaac
     9901 agggctttgc tgccgccctc gccgatggag ggaacggcga aatacagcag cgaaccgagt
     9961 acgaagaaga tggtgtaggt gtttttgcgt ccgattttgt cggaaacgct cgaccacaaa
    10021 aagcgtccgc ccatgttaaa caggctcagg aggctgacga agcctgccgc cgcacctgcg
    10081 ccgactgctg cctgcctgcc tatggaggtt tcggaaaaga gttcctgaat catcacggat
    10141 gcctgaccca atacgccgat gccggcagtt acgtttaggc acaataccca gaacaacagc
    10201 caaaactgcg gcgttttcat ggcttgggac acgttgacat gattgctgct gaccagcttg
    10261 ttttgcgttt tcggcgcgat atagccttca ggtttccagc cgtcggcagg tacgcggatg
    10321 gtaaacgcgc cgaacatcat cagtgcgagg taaagcagtc ccaatacggc aaaggtttca
    10381 acaaccccga ccgaagcggc gtttgaaaag gcgttcatca gtgatacgga aagcggtgag
    10441 gccagcattg cgccgccgcc gaaacccata attgccaaac cggtcgccat acccggcttg
    10501 tcgggaaacc atttcatcag tgtggaaacc ggcccgatgt agcctaagcc taagcctacg
    10561 ccaccgatga cgccgttgcc caaataaagc aggaagaggt tgtgcgtact cacgccgaat
    10621 gcggatacga agaagcccag gctgaaacag caggcggcgg caaatatggc tttgcgcggc
    10681 cctacccgtt ccatccatgt gccgaacagg gcggccgacg cgcccagcat cgcgagtgcg
    10741 atactgaaaa tccaacctac ggtcgtcagc ttccaatctc cggccgccga ttcggttatg
    10801 ccgataagtt tggtcagcgg cgcgttgaat acggaatagg cgtaaatctg cccgatggca
    10861 aggtgtaccg ccaatgctgc gggcggtacg agccaacggt tgaaacccgg cttggcaatg
    10921 cttgcctcac ggtctaaaaa cttcataaca tcctctttct gtcagttgaa aaataaaatt
    10981 tcatttgctc aatggaaact tattgaaaat tataaaaaaa tatcgggtcg ggtttttatc
    11041 cgccccaaga tgcgccgtct gaaacatttc gggtgtacgg aaaggtttct gttttttccg
    11101 acaaattcct gcggcttttc gcttccggat tcccgctttt gcgggaatga cgaattaaag
    11161 attatcttaa ggtcaaggga ctggattccc gctttcgcgg gaatgacggc ggagggggag
    11221 cggtttttcc gattgggttt aaatgcaatc gaacaaatcc tgctgccctt gttctttgct
    11281 tacgcgcacg tcggtttcgc cgtcggcgaa ggtaatgtgc agcttctgcc cctgcttcaa
    11341 aacatcggcg ttgcggatga cttgtccgcg tgtatctttg acgacggaaa agccgcgttc
    11401 caaaatgtgc tgcggcgaaa cggcttcgag caatgcggct tgggcggtca ggctttggcg
    11461 gcggtgggta agcagttggc tgaaggcggc gggcaatgcc gtctgaaggc ggacgatgtt
    11521 gtttttgcaa acggaaacat caggacggta atgttgcagg gcttgggttt ggcgttcaaa
    11581 acgggcggtg tgggcacgga ggttttgctt catagagtaa gacagcgttt gcgccagctt
    11641 gccgattgaa gcgcgctgct catcaagttt ttggcgcgga tgacggattt gccgcgcaag
    11701 ccagtcgagt ttttggctgg catcgaaata gcgttgttcc aaaacggttt tcagacggcc
    11761 ttgcgcctgg gcgagacgat gtagcgattc ttggcggttg gggctgacca gttccgccgc
    11821 gccggtcggc gtgggcgcgc gcacgtcggc gacaaaatcg gcaagcgtga aatcggtttc
    11881 gtgtcccacg ccactgacga cgggaaccgt gcaggcttcg attgcgcgta cgaccggttc
    11941 ttcgttaaac gcccacaaat cttcaatgct gccgccgccg cgacagacaa tcaacacgtc
    12001 gcattcggcg cgttgcgatg cggttttaat cgcttgggca atctgaaact cgctgcctgt
    12061 gccttgaaca ggtgtcggat aaacgataac gggaatttcg ggcgcgcggc gtttcaaggt
    12121 ggttacaaca tcgcgcaatg ccgccgccgc caaactggtt acgatgccga tacattgagg
    12181 gcggacgggc aacggttttt tgcgttcctc cgcaaacgcg ccttccgcct gcaactgcgc
    12241 cttcaaccgc tcataggctt cgtaaagctg ccccaaacct ttgagccgca cttcgttcac
    12301 ggtaatctga aattcgcccc gcgtttcata aatactgatt ttgcccgcca cttcgatatg
    12361 gtcgccttct ttcaaaggtt tcgccaaacg cgccgccgca cccttgaaca tcgcgcaacg
    12421 cacctgcgcg cggctgtctt tgagcgagaa ataataatgc ccgctggcgg cacgggtcag
    12481 gttggacact tcgcccgcaa tccacagacc ggcaaggtgg ttttccaaaa tacttttggc
    12541 aaatgcgttc aactcggaaa cggacaacac gtcagaatgg aaaaaatcag acatcgaatc
    12601 aatcaaatag taaaaaatat gaatatgttt tgaagcccaa ggcggcatag agccgcctaa
    12661 attgtcaaca atattataac acgcgccatc ttgccgcccg actttgcccg tatgactttt
    12721 ttaagcgggg aatgggaaaa atattcatca acctgcctgc aatctattca aattgaaccg
    12781 ccgacaagct atgatgcgga tattttcgac aggaggaacc atggatacgc aggcagttat
    12841 cacacatatc gcccgatggt tggacgaata cgccactcag gcaaatgcaa aaggattcgt
    12901 cataggcgtt tccggcggca tcgattccgc cgtcgtctcc acactcgccg cccgcaccgg
    12961 ccgccccacg ctgcttctgg atatgccgat acgccaacac cccggccagc ttgagcgggc
    13021 aaggctgcac atccgcaatc tgcaacggca atatgccaat gtaagcgcgc aaacggccga
    13081 tttgaccgac accttccaga cctttgaaca aaccgtcggc attcatcaga cggcatttga
    13141 caatcagccg ctttccctcg ccaacgccaa aagccgcctg cgtatgctga ccctgtacta
    13201 ctacgggcag atacacggac tgctggttac ggggacaggt aataagattg aagatttcgg
    13261 cgtgggattt tttaccaaat acggcgacgg cggcgtagac atcagcccga ttgccgacct
    13321 gaccaaaacg caggtttacc ggcttgccga agcattgggc gtggacgagg cgattcaaaa
    13381 agccccgccg accgacggcc tgtgggatac ggaacgcacc gacgaagaac agatgggcgc
    13441 aagctatccc gaactggagt gggcaatggg cgtgtacggc acgcgcaaac ccgaagattt
    13501 tgaagggcgg cagcgcgaag ttctggaaat ctatacgcgg ctgcaccgcg cgatgcagca
    13561 caaaatcaac ccgattcccg tgtgccgcat tccgcccgaa ttgttgggct gaaacgtgga
    13621 aatgccgtct gaagcggaaa aaccgtattt cagacggcat ggaaatatcc ggctcccgtt
    13681 ccttaagaat cgagtacgcg ggcaaacaga atatcgtttt ccaaatgaat gtggtcgttc
    13741 aaatcctcca ccatttcttt ggccaaagcg taaaggcgcg tccagcttcc gcaagcccct
    13801 tctggcggtt ggaaattgtc ggtcagctct ttgagccgtg cgatggcgcg gtcgtgttct
    13861 tcgtgttcgt gcatcatcac gctgatgggc attgccgcac cgcgtccgac accctgatta
    13921 atcatcggaa acagcatcct ttcctctttc atcatatgca tcagcagttc gttctgcata
    13981 tcggcaagca gcctggcaat ttccgccgga aaggtatcgg catggacttg gaccactttc
    14041 tgcgccagcg gcaccaattc ttcaaattgt gcgcggtgga cattgtggta gcgttgcagg
    14101 atataatcga cggttgcgcc aaagggggct gtttcccaaa cggaaaaatc agtcattgca
    14161 gtgttccttt tatagggttt cgggtttggt tttgaacatt catactttaa gaatctattt
    14221 aaacggagca tacaccgccc gcgcgtttct gtacagcttc aaaaacattc cttacacttt
    14281 gataataaaa gtaattttca aaaataaaat actgtccgaa ccgtttttta gaatttgcaa
    14341 aggcgattgg ggcggtacag aaaaactatt atcccgcccg cccacttgaa atttttatgc
    14401 ccaagcccta tcctgcacgc tatcgtgcca atcccaaccg aaaaggaaaa ataatgagca
    14461 gcgaattgat tatacacacc agcgatgccg cttttgaaaa agacgtttta aattcagata
    14521 cccccgtcct gctggacttt tgggctccgt ggtgcggccc ctgcaaaatg attgccccga
    14581 ttttggacga catcgccgcc gaatttgaag gccgtctgaa agtggtcaaa atcaacatcg
    14641 acgacaacga agccaccccg tcccgtttcg gcgtgcgcgg cattccgacc ctgatggtgt
    14701 tcaaaaacgg cgaagtcgtg gctaccaaag tcggcgcatt ggcaaaaggt cagctgaccg
    14761 cctttgtcga agcctccatc gcctgataaa gcgcaatcga aaaagccgcc ggaagattcc
    14821 ggcggctttt tcgcaccctt aagatttgtg gcggatttcc cagcacctat ggattttttt
    14881 gttgcggaaa tcttcgggaa cggattgttt ggaaatgtct ttgacggcgt attgttccga
    14941 taccaagtcg tctaagacga agctgctcag gttgttggaa aagtacaaaa tgccgtctga
    15001 agcgagcagc ttcaccgcgc cgtcaatcag ctttttgtgg tcgcgctgga tgtcgagaat
    15061 gtcgagcatc tttttgctgt tggagaagct gggcgggtcc atcacaatga ggtcgaaccg
    15121 cctgccttcc ccatatgccg tctgaagata ttgaaacacg tcggcgcgga cgattttgtg
    15181 tcgttccgta tcgatgccgt tcaattcaaa attgcgtttc gcccaatcaa gatatgtgtt
    15241 ggacaaatcg acggtttcgc tggatgccgc gccgccggtg gcggcataga cggtgaagct
    15301 gccggtgtag gaaaacaggt ttaaaaaacg tttgcccgcc gccgtttcgc cgactttttt
    15361 gcgcgtgttt cgatgatcca aaaaaagccc cgtatccaaa tatttatcaa ggttgaccca
    15421 aaacttgcgg ccgttttcgg tgatgacgaa atcgtcgccc gccttgccgg ttttctcgta
    15481 ctgctgcaaa cctttttggc gttcgcggcg tttgaggcgg atttgttcgg gcgcaaaacc
    15541 ggtaacgaaa gcgacggctt ccaagacttc ggcaagccac gcttcgtatt cttcgggccg
    15601 catcagccag ccggtatcgt attcctgaag gtggattcga tcgccgtaaa catcggcggc
    15661 aaaggggaat tgggggatgt cgcggtcgta aatgcgccag gcttcgatgc cgttgcgttt
    15721 cacccatttc ataaggtgtt tgatgttttt gcccaagcgg ttggcaaacg gtgtgatgtc
    15781 ggtcattggt ttcaggcgga ataaagtgga aaacggcaat tttactgtaa ttaacgcccg
    15841 attgcttgac cgtttcgggc aaaccctata ccatccgtcg cttatcttgt catacgaagc
    15901 catcgccttc caacctaaac cgcccttacg ggcgcgtttc ttctgttgct ttgattttgc
    15961 aaagcatatc tgtgcaggtt gccgtcgatg taaaccacaa gcaagccgct tgcgacaacc
    16021 ctgtaacttc acattccccg tatcgttacc cttccctgct tcaggccgtc tgaacctttc
    16081 ggacgcgggc gttgttgtct tccaaggata gccatgtcta ttaaatttgc cgatttgaac
    16141 cttgataaaa acattttgtc cgccgtcagc agcgagggtt acgaaagccc gaccccgatt
    16201 caggcgcaag ccattccgtt tgctttggaa ggccgcgaca tcatggcttc ggcgcaaacc
    16261 ggctccggca aaaccgccgc ctttctgtta ccgactttgc aaaaactgac caaacgcagc
    16321 gaaaaaccgg gcaaaggccc gcgtgctttg gtgttgaccc cgacccgcga actggcggct
    16381 caagtcgaga aaaacgcgct ggcgtatgcc aaaaatatgc gttggttccg caccgtcagc
    16441 atcgtcggcg gcgcgtcttt cggctaccaa acccgtgccc tgagcaaacc ggtcgatctg
    16501 attgtcgcca cgccgggccg tctgatggac ctgatgcaaa gcggcaaagt tgattttgaa
    16561 cgtttggaag tgctgatttt ggacgaagcc gaccgtatgt tggatatggg ctttatcgac
    16621 gacatcgaaa ccatcgtgga agcaacgccg agcgaccgtc agactttgtt gttctccgcc
    16681 acttgggacg gcgcggtcgg caaactggcg cgcaaactga ccaaagaccc tgaaatcatc
    16741 gaagtcgaac gcgtggacga tcaaggcaaa atcgaagaac aactgctgta ctgcgacgat
    16801 atgcgccaca aaaaccgcct gctcgatcat atcttgcgcg atgccaatat cgatcaatgc
    16861 gtgattttca cgtccaccaa agccatgacc gaagtcattg cggatgaact gtacgaaaaa
    16921 ggtttcgccg caaactgcct gcacggcgat atgccgcaag gctggcgcaa ccgcacgctg
    16981 atggatttgc gtaaaggccg ctgcaaaatt ttggttgcca ccgatgttgc cgcacgcggt
    17041 atcgacgtac cgaccattac ccacgttatc aactacgacc tgccgaaaca ggcggaagac
    17101 tacgtccacc gcatcgggcg caccggccgc gcaggccgca cgggtattgc gattacgttt
    17161 gccgaagtga acgaatacgt caaagtccac aaaatcgaaa aatacattaa ccgaaaactg
    17221 cccgaactga ccatcgaagg catggaaccg acccgcaaac gcaaatccgc aggcggcaag
    17281 ccgaaaggca aaggcggctg gggcgatcgt aaatccggcg gttggcgcgg cgatcataaa
    17341 ccgagcaaag aaggcttcgg cggcaaaacg cgcggcgaag gtttcaagaa agaaggcttt
    17401 aagagagacg gtttcaaaaa aaccggcgaa ggcttcaaag gcaaacgcaa agccggcgat
    17461 tcttttgcag gcaaaggcga acgccgttac aaagaccgct aagccccaac ctgccgcata
    17521 aaccaatgcc gtctgaaacc gatttcgagt ttcagacggc atttttgcaa tgtttcagca
    17581 ccgcccggct ttgataccca aaggattaat ct
//
LOCUS       DAWITQ010000024        17176 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.024, whole genome shotgun sequence.
ACCESSION   DAWITQ010000024 DAWITQ010000000
VERSION     DAWITQ010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17176)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17176)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17176
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.024"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..143)
                     /locus_tag="WIX18_000697"
     CDS             complement(<1..143)
                     /locus_tag="WIX18_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237841.1"
                     /translation="MPSERLSDGIFPCVLNRAHETPDAFGGNVGCRAMFGGDQRTKCA
                     GKGL"
     gene            complement(161..718)
                     /locus_tag="WIX18_000698"
     CDS             complement(161..718)
                     /locus_tag="WIX18_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEZ5237842.1"
                     /translation="MDALKLLTNRRSSKKLKHPAPDAAELEQIFQAATQVPDHGNMRP
                     FRFTVIQGEVGLQRFRDVLKQTVAELNFGDDAMKKAEKVGNMAPMVIGVTFAPNRDVP
                     KPKPEWEQMLTAGCAAYALQLAATAQGFDNVWITGMWVNSPLLREAFGCADKDKIIGL
                     MMVGTPTEEVHKPKNTDLEAFVSHW"
     gene            complement(794..2428)
                     /locus_tag="WIX18_000699"
     CDS             complement(794..2428)
                     /locus_tag="WIX18_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipooligosaccharide phosphoethanolamine
                     transferase LptA"
                     /protein_id="HEZ5237843.1"
                     /translation="MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELHPFNGT
                     GADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKS
                     MLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKEFLTRLVLAA
                     VSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLD
                     MAVVQNRPAGSLRRFVVLVVGETTRAANWGLNGYSRQTTPLLAARGDEIVNFPQVRSC
                     GTSTAHSLPCMFSTFDRTDYDEIKAEHQDNLLDIVQRAGVEVTWLENDSGCKGVCGKV
                     PNTDVTSLNLPEYCRNGECLDNILLTKFDEVLNKNDKDAVLILHTIGSHGPTYYERYT
                     EAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDDLESVVHYV
                     SDHGESLGENGMYLHAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENE
                     YSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR"
     gene            complement(2709..3815)
                     /gene="serC"
                     /locus_tag="WIX18_000700"
     CDS             complement(2709..3815)
                     /gene="serC"
                     /locus_tag="WIX18_000700"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HEZ5237844.1"
                     /translation="MSLYPIYNFSAGPAVLPEAVLETARQEMLDYNGTGFPVMAMSHR
                     SEMFLSILHHAEQDLRQLLKVPDNYKILFLQGGATTQFNMAAMNLAHGFRTADAVVTG
                     NWSRIAYEQMSRLTDTEIRLAAHGGEQFDYLDLPPVETWDVAPDSAFVHFAVNETVNG
                     LQYREVPRLSEGMPPLVCDMSSEILSREFDVADYGLIYAGAQKNIGPAGVTVVIVRED
                     LLERCPNDIPDVFNYRSHLNRDGMYNTPSTYAIYMSGLVFRWLQAQGGVKKIEAVNRL
                     KAQTLYETIDGSGGFYINRIRPNARSKMNVVFQTRDEELDRRFVLEAELQGLCLLKGY
                     KSVGGMRASIYNAMPLEGVRALADFMRDFQRRYG"
     gene            4180..4611
                     /gene="rimP"
                     /locus_tag="WIX18_000701"
     CDS             4180..4611
                     /gene="rimP"
                     /locus_tag="WIX18_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HEZ5237845.1"
                     /translation="MDIQTILEKTLPGLGYELVDFELTAQGTLRVFIDKESGITVEDC
                     ATVSNHLSRVFMVEDIDYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQK
                     NFIGKIEGCENDTVTISFDGKTVQIELGNIDKARLRPEFKF"
     gene            4639..6141
                     /gene="nusA"
                     /locus_tag="WIX18_000702"
     CDS             4639..6141
                     /gene="nusA"
                     /locus_tag="WIX18_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HEZ5237846.1"
                     /translation="MSREMLQLAEALASEKNVDAEVVFQALEFALSTAAKKKADREHM
                     DVRVQINRDTGEYQTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTAIQIGEYYEEQL
                     PNEGFGRQAAQTAKQIILQRIRDAEREQNLNEFLAVKEDIVSGTVKRVERHGIIVEVV
                     AGKLDALIPRDQMIPRENFRSGDRIRALFLRVEEIGNTGRKQVILSRTSGDFLVKLYA
                     NEVPEIADGMLEIRAVARDPGQRAKVAVKANDQRIDPQGTCIGVRGSRVNAVSNELSG
                     ERIDVVLWSPEPAQFVMSALSPAEVSRIVIDEDKHAVDVIVDENQLALAIGRGGQNVR
                     LASDLTGWQLNIMTSAEADERNAAEDAAIRRLFMDHLNVDEETADVLVQEGFATLEEV
                     AYVPAAELLAIEGFDEEIVDMLRNRARDAILTMAIAAEEKLGEVSDDMRNLEGIDADM
                     LRSLAEAGITTRDDLAELAVDELIEITGVNEETAKAVILTAREHWFTEDK"
     gene            6153..9041
                     /gene="infB"
                     /locus_tag="WIX18_000703"
     CDS             6153..9041
                     /gene="infB"
                     /locus_tag="WIX18_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEZ5237847.1"
                     /translation="MSNTTVEQFAAELKRPVEDLLKQLKEAGVSKNSGSDSLTLDDKQ
                     LLNAYLTKKNGSNGGTISIRRTKTEVSTVDGVKVETRKRGRTVNIPSAEELAAQVKAA
                     QTQAAPVRPEQTAEDAAKARAEAAARAEARAKAEAEAAKLKAAKAGNKAKPAAQKPTE
                     AKAETAPVAAETKPAEESKAEKAQADKMPSKKPAEPKEKAAKPKHERNGKGKDAKKPA
                     KPAAPAVPQPVVSAEEQAQRDEEARRAAALRAHQEALLKEKQERQARREAMKQQAEQQ
                     AKTAQEAKTGRQRPAKPAEKPQAAAPAVENKPVNPAKAKKEDRRNRDDEGQGRNAKGK
                     GGKGGRDRNNARNGDDERVRGSKKGKKLKLEPNQHAFQAPTEPVVHEVLVPETITVAD
                     LAHKMAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFLD
                     EGAEAVEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVET
                     PRGVITFLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPM
                     VVAVNKIDKEAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLE
                     AEVLELTAPVDAPAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAM
                     VDENGKSITEAGPSIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLA
                     KQQAAKLENMFNNMGETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGV
                     GGITESDVNLAIASGAFIIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMS
                     GMLSPEEKEQITGTVEIRQVISVSKVGNIAGCMVTDGVVKRDSHARLIRNNVVIHTGE
                     LSSLKRYKDDVKEVRMGFECGLMIKGFNEIMEGDQLECFDIVEVARTL"
     gene            complement(9252..10646)
                     /locus_tag="WIX18_000704"
     CDS             complement(9252..10646)
                     /locus_tag="WIX18_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3482 domain-containing protein"
                     /protein_id="HEZ5237848.1"
                     /translation="MNKQPLSLAVVGHTNTGKTSLLRTLLRDSGFGEVRNAPSTTRHV
                     EEAAISDGADTLVFLYDTPGLEDAGGVLEWLENHTDNRSDGIERLQQFLGSHGAHHDF
                     NQEAKVLRQVLQSDMAMYVIDAREPVLDKYRDELIILSWCAKPVMPVFNFTGGQPPES
                     WTTMLARRNLHVFAGFDTVAFDFEGELRLWENLATMLPERSTLDRLTAMRRREWQRLD
                     GEARREIADFLLDAAAFRQEVDENEDTATVLQTMQAEIRQLERQMQQRLFALYRFYHS
                     EIDGGDWMPQAFRQDPFDSELLKQYGIRTGTGAATGALIGLGLDIATLGGSLGLGTAI
                     GGFLGGILPNTRTISDKLSGRQTLHTDPETLTLLAARALDLLHVLQTRGHAAQSDIEL
                     HSRKAPWDATRLPPELNKARSHWKWSSLNTHRPETSRAERAGYVEKLQIRLSGKYSEL
                     NLNQDKAASRRQYK"
     gene            complement(10708..12057)
                     /locus_tag="WIX18_000705"
     CDS             complement(10708..12057)
                     /locus_tag="WIX18_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2868 domain-containing protein"
                     /protein_id="HEZ5237849.1"
                     /translation="MLNPSRKLVELVRILEEGGFIFSGDPVQATEALRRVDGSTEEKI
                     IRRAEMIDRNRMLRETLERVRAGSFWLWVVAASMMFTAGFSGTYLLMDNQGLNFFLIL
                     AGVLGMNTLMLAVWLAMLFLRVKVGRFFSSPATWFRGKDPVNQAVLRLYADEWRQPSV
                     RWKIGATSHSLWLCTLLGMLVSVLLLLLVRQYTFNWESTLLGDSSSVRLVEMLAWLPA
                     KLGFPVPDARAVIEGRLNGNIADARAWSGLLVGSIACYGILPRLLAWVVCKILLKTSE
                     NGLDLEKPYYQAVIRRWQNKITDADTRRETVSAVSPKIILNDAPKWAVMLETEWQDGA
                     WFEGRLAQEWLDKGVAANREQVAALEAELKQKPAQLLIGVRAQTVPDRGVLRQIVRLS
                     EAAQGGAVVQLLAEQGLSDDLSEKLEHWRNALAECGAAWLEPDRAAQEGRLKTNDRT"
     gene            12200..12826
                     /locus_tag="WIX18_000706"
     CDS             12200..12826
                     /locus_tag="WIX18_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HEZ5237850.1"
                     /translation="MYTGERFNTYSHLSGLILAAAGLVLMLLKTIGHGDGYRIFSVSV
                     YGISLLLLYLSSSLYHGIAAGKLKSILKKTDHCMIYVLIAGSYTPFALVSLRNGPGWT
                     VFSLSWLLAAAGIAQELTIGRKSEKRLLSIAIYIVMGWMVLAVMKSLTASLPPAGLAW
                     LAAGGMLYSVGIYWFVNDEKIRHGHGIWHLFVLGGSITQFVSVYGYVI"
     gene            complement(12890..14308)
                     /locus_tag="WIX18_000707"
     CDS             complement(12890..14308)
                     /locus_tag="WIX18_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEZ5237851.1"
                     /translation="MENILSVLVGTVNRFLWDYLLIYALLGIGLFFTLYLGAPQITKL
                     GAGFKSVFGGLFAKGDKDDKSLSQFQALAVAISAQIGTGNVAGVATAITAGGPGAIFW
                     MWVSAVLGMSTIFAEALLAQKYRVVSHGKYIGGPAFYITHGLTPKIGRGAARFLSGFF
                     SIALIIALGFIGNATQANSIASAVTIAFDVPSLAVGIVLAVLAGMVVIGGVNRIANIA
                     QFVVPFMAVVYILCAVVILFEFSDHIVPMFNHIFTAAFNPEAVLGGAAGIGMREAIRF
                     GVARGLFSNEAGMGSTPHAHATADVKHPVQQGMAAFVGVFIDTILVCTATALIILLTD
                     ANLSGEQGAAVTQFAFNKAFPGFGSQLLAVCLTFFALTTIIGWYYFGESNIRFLFRGR
                     HLGIYRALVLLAIVLGTLGKVDLVWSLSDMFNGFMVIPNLIALFLLRKEIRAIYDDYL
                     AQKKAGRDLSYQYEFHEFHDKG"
     gene            14635..15363
                     /locus_tag="WIX18_000708"
     CDS             14635..15363
                     /locus_tag="WIX18_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEZ5237852.1"
                     /translation="MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPG
                     ANPRLRLALEKAAENNMPKDNVQRAIDKGTGNLEGVEYIELRYEGYGIGGAALMVDCL
                     TDNKTRTVADVRHAFTKNGGNLGTDGCVAFNFVHQGYLVFEPGVDEDALMEAALEAGA
                     EDVVTNDDGSIEVITAPNDWAGVKSALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQ
                     KLIDALEDLDDVQDVYTSAVLNLD"
     gene            complement(15422..15910)
                     /locus_tag="WIX18_000709"
     CDS             complement(15422..15910)
                     /locus_tag="WIX18_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HEZ5237853.1"
                     /translation="MTPLFRKAVWLLFAVSVCAFAGSLAAQYVLGMEPCVLCISQRLC
                     VLATALCTAIVLMCRPRRRAGGLFGAVFISIPAVTGISVAAYQLWLQSLPPGTAPSCG
                     APWTFRLKGWSLFDWFEPVVRGFGNCAEPDYLLGVALPVWSAAYFLAVVLTVWWAWAR
                     AK"
     gene            complement(16668..17132)
                     /locus_tag="WIX18_000710"
     CDS             complement(16668..17132)
                     /locus_tag="WIX18_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HEZ5237854.1"
                     /translation="MKELDKIDFRILKILQQNARIPMTELAEKVGLSTTPVTERVRRL
                     EREHYISGYHAHLNPHLLGKPLLVFVELKLQSKSGNIFEDFKKEVLKIPQIMECHLVS
                     GEYDYLIKVRLPDMSAYRDMLGNILLQLPAASESRSYVVMEEVKENPVLDLD"
BASE COUNT         4497 a         4789 c         4346 g         3544 t
ORIGIN      
        1 agacctttgc ctgcgcactt ggtgcgctgg tcgcctccga acatggcgcg acacccgaca
       61 tttccgccga acgcatcggg cgtttcatga gcccggttta aaacgcatgg aaaaatgccg
      121 tctgaaagcc tttcagacgg cattgtgctt gagattccgt ttaccaatgg ctgacaaacg
      181 cttccaaatc ggtattcttg ggcttatgca cttcctctgt cggcgtgccg accatcatca
      241 gcccgatgat tttatcctta tccgcacatc cgaaagcctc acgcaacagg gggctgttga
      301 cccacatccc cgtaatccag acattgtcga aaccttgcgc cgttgccgcc agttgcagcg
      361 catacgccgc acaacccgcc gtcagcatct gctcccattc cggtttcggc ttaggcacat
      421 cgcggttcgg cgcaaacgtt acaccgataa ccatcggcgc catattgccc actttttccg
      481 cctttttcat cgcatcgtcg ccgaaattca attcggcaac cgtttgcttt aacacatcgc
      541 gaaaacgttg caatcctacc tcgccttgaa tcacggtaaa acggaagggg cgcatattgc
      601 cgtgatcggg aacttgggtt gccgcctgaa atatttgttc caactccgcc gcatcggggg
      661 cggggtgctt cagctttttg gaagatcggc ggttcgtcaa taattttaaa gcatccatat
      721 cgttatactc cggtcatcgg tcgggtgttc ggacacatat gccgtccgaa ggcttcagac
      781 ggcatatccg gcatcagcgc ggacggcggc aggctgccaa tatatccatt tccttccgat
      841 aggtttggct gttggaaatg tccatcagcc ccaataccgt gctgaaatag tggtcgtgcg
      901 aatattcgtt ttccgccgct ttttgtttga ggcattggaa atctatgccc ccgtgttggc
      961 ggaaggcttt ggaaaaccac ataaccatcg ggatatgcgt ctgcccggaa ggcgcgatgg
     1021 cgtaaggcgc ggcgtgcagg tacatcccgt tttcgcccaa actttcgccg tggtcggaaa
     1081 cataatgcac cacgctttcc aaatcgtcgc ggttttcaag tttgcggata accttgtcga
     1141 taaactggtc cacatacaaa accgtattgt cgtaagtgtt gaccagcgtg gcgcgggtgc
     1201 atttgttgat ttcgttggtg tcgcaggtcg gcgtgaattt gcgttcggct tcggtatagc
     1261 gttcgtaata cgtcggcccg tggctgccga tggtatgcag gattaaaacc gcgtctttat
     1321 cgtttttgtt gaggacttcg tcgaacttgg tcagcaggat attgtcgagg cactcgccgt
     1381 tgcggcagta ttcgggcagg ttgagcgagg taacgtcggt attcggcact ttgccgcaca
     1441 cgcccttgca gccggaatcg ttttccaacc aggtaacttc cacgccggcg cgctgcacga
     1501 tgtccagcag gttgtcttgg tgttcggctt tgatttcgtc ataatccgtg cggtcgaagg
     1561 ttgagaacat acacggcagg gagtgcgcgg tcgatgtgcc gcagcttctg acctgcggga
     1621 aattgacaat ttcatcgccg cgcgcggcaa gcagcggcgt agtttggcgg ctgtaaccgt
     1681 tcaaacccca gttggcggca cgcgtggtct cacccacgac cagcaccacg aaacggcgca
     1741 ggctgccggc cggccggttt tgcacgaccg ccatatccaa ttgcgtataa ggaatattgg
     1801 aacgcttcca atctttgtat ttcgacacgc ccgcgccgat gaaattagac ggcacaatca
     1861 gatgggttac tgatttattg ttgcggaaaa acgaggcgta atcctgatat tgcaacattg
     1921 cgatgcccaa cgcgcacaaa aaggaaacgg cggcaagcac aaggcgcgtc aaaaactcct
     1981 tataccaaac gcggtattta accttgacgg cgatatacgc cagcgcgggc aatacgccca
     2041 aacatacaat ccacagcaca tagcccggcg taatcaggcg cgcgctttcg gcagccgtag
     2101 tttgcaagac attattcaac atcgacttgt tgaaatagat attgaaaaat atttcttggt
     2161 aagacaccgc cgcactgata accaatatca acggaatcaa taccttatgc acgaaaggca
     2221 gggcaatgac gtgaaaaacg aaattactta aaaaaaacag caccaccggc atcgtataga
     2281 ggaagatatc cgccccggtg ccgttaaaag gatgaagctc gacaactttg gcaaaaaagg
     2341 cgtaattcaa taccagcgag gaatacaggg aaaggaaggc aatcagcgcg gaagagccga
     2401 gcttcggcct caggttcggt tttatcattt ggaatgtgtc ggataagggt tggaaaaggc
     2461 atccggcatt tggaatccgg attattgaaa aagattctta attataaggc aacggagcaa
     2521 agcagggcaa gaaaacggaa ggcgacgcag gctgtcggat acacatctcg gcacaaacag
     2581 catcacgccc ggattgaaaa ggacggatag ccgccggcag cacagtttta ccccgcatcc
     2641 caaaacgccg ccggagaacg ccgaaacagc cgatgccgtc tgaagccgct tcagacaaca
     2701 tcgggacatc aaccgtaacg ccgttggaaa tcgcgcataa aatctgccaa agcccgcacg
     2761 ccttcgagcg gcatcgcatt ataaatgctg gcacgcatcc cgccgacaga cttatagccc
     2821 ttcaacaggc acaagccctg caattcggct tccagcacaa aacggcggtc aagctcctca
     2881 tccctcgttt ggaacacgac attcatttta gaacgcgcat tcggacggat acggttgata
     2941 tagaaaccgc cgctgccgtc tatcgtctca tacaaggttt gcgccttcag cctattgacc
     3001 gcttcaattt ttttcacacc gccctgcgcc tgcagccagc ggaacaccag ccccgacata
     3061 taaatcgcgt aagttgacgg cgtgttgtac ataccgtcgc ggttcaaatg cgaacggtag
     3121 ttgaacacat cgggaatatc gttcggacaa cgctcgagca aatcctcacg cacaatcacc
     3181 accgtaaccc ctgccggccc gatgtttttt tgcgcgcctg cgtaaatcaa gccgtaatcg
     3241 gcaacatcaa actcgcgcga caaaatctcg ctggacatat cgcacaccag cggcggcatg
     3301 ccttctgaaa ggcgcggcac ttcacggtat tgcagcccgt tgaccgtttc attgacggca
     3361 aaatggacaa acgccgaatc gggtgcaaca tcccacgttt ccacaggcgg caggtcgaga
     3421 tagtcgaact gctcgccgcc atgcgccgcc aaacggattt ccgtatcggt caaacggctc
     3481 atctgttcat aagcgatacg gctccagttg cccgttacca ccgcgtcggc agtgcggaaa
     3541 ccgtgtgcca gattcatggc tgccatatta aattgggttg ttgctccgcc ctgcagaaac
     3601 aatatcttat agttgtcagg cactttcaaa agctgcctca aatcctgttc cgcatgatgc
     3661 aggatgctca aaaacatttc cgaacggtgg ctcatcgcca tcacaggaaa acccgtaccg
     3721 ttgtagtcca acatttcctg ccgcgccgtt tccaacacgg cttcgggcaa tacggcaggg
     3781 ccggcggaaa aattgtaaat cggataaaga gacatgatgc agccttgatt ctgaacaata
     3841 acccgcccga ttttaggctt gcagcaggct ttgtgcaagg atggaaaata cctgtcctcc
     3901 gcccggcttc atgccgcccg aacacggaaa acaacatcaa tatattgatt tacaaacata
     3961 aaaatcatgc tagcgacaaa tagatacatt tgttttgtca acaatattca cgatttccca
     4021 ttacaaacct cccttacacc cgcttttttc cgtcccaaaa acacaaaata aatcaacact
     4081 ttcatttctc cgcaaaagcg gttataatta cgccgatttt tcaactttga cgaaaaatgg
     4141 ccacggggcc atttttttat tatgtacata gggagcagca tggatatcca aaccatcctc
     4201 gaaaaaaccc tgcccggcct gggctacgaa ctggtcgatt tcgaactgac cgcgcaagga
     4261 acattgcgcg tgttcatcga caaagaaagc ggcattaccg tcgaagactg cgcaaccgtc
     4321 agcaaccatt tgagccgcgt cttcatggtt gaagacatcg actacaaaaa cctggaaatt
     4381 tccagccccg gactcgaccg tcccttgaaa aaagccgccg acttcgtgcg ctttgccggt
     4441 cagaatgcca aaatcaaaac ccgcctgccg atagacggtc agaaaaactt tatcggtaaa
     4501 atcgaaggct gcgaaaacga taccgttacc atatccttcg acggcaaaac cgtacaaatc
     4561 gaattgggca acatcgacaa agcccgcctg cgccccgaat tcaaattcta aaacacaaca
     4621 atattggaga tgttcaaaat gagtcgtgaa atgttacagc tggcagaagc actggcaagc
     4681 gaaaaaaacg ttgatgcgga agtcgtcttc caagcactgg aattcgccct gtctaccgcc
     4741 gccaagaaaa aggcagaccg cgaacacatg gatgtccgcg tccaaatcaa ccgcgatacc
     4801 ggcgaatacc aaaccttccg ccgctggctg attgtcgccg atgaagacta tacctatccc
     4861 gatgtcgaaa aaaccatcga ggaaatccaa gaggaaattc ccggcaccgc catccaaatc
     4921 ggcgaatact acgaagagca gctgcccaac gaaggcttcg gccgccaagc cgcgcaaacc
     4981 gccaaacaaa tcatcctgca acgcatccgc gatgccgagc gcgagcagaa tctgaacgag
     5041 tttctcgccg tcaaagaaga catcgtgtcc ggcacggtca aacgcgtcga acgccacggc
     5101 atcatcgtcg aagtcgttgc cggcaaactg gacgcgctga ttccgcgcga ccaaatgatt
     5161 ccgcgcgaaa acttccgcag cggcgaccgc atccgcgccc tcttcctgcg cgtcgaagaa
     5221 atcggcaaca ccggccgcaa acaagtcatc ctgagccgta cttccggcga tttcctcgtc
     5281 aaactgtacg ccaatgaagt acctgaaatt gcagacggca tgcttgaaat ccgcgctgtc
     5341 gcccgcgacc cgggccagcg tgccaaagtc gccgtcaaag ccaacgacca gcgcatcgat
     5401 ccgcaaggca cctgtatcgg cgttcgcggt tcgcgtgtca atgccgtcag caacgaattg
     5461 tccggcgagc gcatcgacgt tgtcctttgg tcgcccgagc ctgcccaatt cgtcatgagc
     5521 gcgctctcac ccgccgaagt cagccgcatc gtgattgacg aagacaaaca cgccgttgac
     5581 gtgattgttg atgaaaacca actggcgcta gccatcggac gcggcggtca aaacgtgcgc
     5641 cttgcttccg acctgaccgg ctggcagctc aacatcatga cttccgccga ggcagacgaa
     5701 cgcaatgcgg cagaagatgc cgccatccgc cgcctgttta tggatcactt gaacgtggac
     5761 gaagaaaccg ccgacgtact ggttcaagaa ggttttgcaa ccttggaaga agtcgcctat
     5821 gttcctgccg ccgaactgct tgccattgaa ggatttgacg aagaaatcgt cgatatgctc
     5881 cgcaaccgcg cccgcgatgc catcctgacc atggcgattg ccgccgaaga aaaactgggc
     5941 gaagtgtccg acgatatgcg caacctcgaa ggcatagatg ccgatatgct ccgcagcctt
     6001 gccgaagcag gcattaccac ccgcgacgac ttggcagagc ttgctgtgga cgaactgatt
     6061 gaaatcaccg gtgtaaacga agaaaccgca aaagccgtca tcctgaccgc acgcgaacac
     6121 tggtttaccg aagacaaata aagggggtac agatgagtaa cacaaccgta gaacaatttg
     6181 ccgccgagct gaaacgcccc gtcgaagacc tgttgaaaca gttgaaagaa gccggcgtca
     6241 gcaaaaacag cggcagcgat tccctgacgc tggacgacaa acagcttctg aacgcctacc
     6301 tgaccaagaa aaacggcagc aacggcggca ccatcagcat ccgccgcacc aaaaccgaag
     6361 tcagcaccgt tgacggcgta aaagtcgaaa cacgcaaacg cggacgcact gtcaacattc
     6421 cttctgccga agaattggca gcacaggtaa aagccgccca aacccaagcc gcacctgtcc
     6481 ggccggagca gacggcagaa gacgcggcaa aagcccgagc cgaagctgcc gcacgtgcag
     6541 aagcccgtgc caaggcagaa gcggaagcgg caaaactgaa agcggcaaaa gcaggcaaca
     6601 aagccaaacc tgccgcgcag aaacccaccg aagcaaaagc cgaaaccgca cctgttgcgg
     6661 cggaaaccaa acccgccgaa gaaagcaaag cggaaaaagc ccaagccgac aaaatgccgt
     6721 ctaaaaaacc cgccgagccc aaagaaaaag ccgccaagcc gaaacacgag cgaaacggca
     6781 aaggcaaaga tgccaaaaaa ccggcgaaac ctgccgcacc tgccgtgccg caacccgtgg
     6841 tcagcgcaga agaacaggcg caacgcgatg aagaagcacg ccgtgccgcc gcacttcgcg
     6901 cccaccagga agccctgttg aaagagaaac aggaacgtca ggcacgccgc gaagccatga
     6961 aacaacaggc agaacaacag gcaaaaaccg cacaggaagc caaaaccggc agacagcgtc
     7021 ccgccaaacc tgccgagaaa ccgcaggcag ccgcgccggc cgtcgaaaac aagcctgtca
     7081 atccggcaaa agcgaaaaaa gaagaccgcc gcaaccgcga tgacgaaggt caaggccgca
     7141 acgccaaagg caaaggcgga aaaggcgggc gcgaccgcaa caatgcacgc aacggcgacg
     7201 acgagcgcgt acgcggcagc aaaaaaggca aaaaactcaa actcgagccg aatcaacacg
     7261 ccttccaagc accgaccgaa cccgtcgttc atgaagtttt ggttcccgaa accattaccg
     7321 ttgccgattt ggcgcacaaa atggcggtca aaggcgtgga agtggtcaaa gccctgatga
     7381 agatgggcat gatggttacc atcaaccaat ccatcgacca agacaccgcc ctgattgtgg
     7441 tggaagaact cggccacatc ggcaaacctg ccgcagccga cgaccctgaa gcattcttgg
     7501 acgagggcgc ggaagcagtg gaagccgaag cattgccgcg tccgcccgtc gttaccgtga
     7561 tgggccacgt cgaccacggc aaaacctcgc tgctggacta catccgccgt accaaagtgg
     7621 tacagggcga agcgggcggc attacgcagc acatcggcgc gtaccacgtt gaaacccctc
     7681 gcggcgtgat taccttcttg gacaccccgg gccacgaagc ctttaccgct atgcgcgcac
     7741 gcggtgcgaa agcaaccgac atcgtgattc ttgtggtcgc cgccgacgac ggcgtgatgc
     7801 cgcaaaccat cgaagcgatt gcccacgcca aagcggcagg cgtaccgatg gtggttgccg
     7861 tcaacaaaat cgataaagaa gccgccaacc cagagcgtat ccgccaagag ctgaccgcac
     7921 acgaagtcgt gcctgacgaa tggggcggcg atgtacagtt tatcgacgtt tccgctaaaa
     7981 aaggcctgaa catcgatgca ttgctcgagg cagtcttgct cgaagccgaa gttttggaac
     8041 tgaccgcacc tgtcgatgcg cccgccaaag gcatcatcgt cgaggcgcgc ttggacaaag
     8101 gccgcggcgc ggttgccaca ttgctggttc aaagcggcac gctgaaaaaa ggcgatatgc
     8161 tgctggccgg tacggcattc ggcaaaatcc gcgcgatggt cgatgaaaac ggcaaatcca
     8221 ttaccgaagc cggtccgtcc atccccgtcg aaatcctcgg cttgtccgac gtaccgaatg
     8281 cgggtgaaga cgcgatggta ttggcggacg agaaaaaagc gcgcgaaatc gccctcttcc
     8341 gccaaggcaa ataccgcgac gtgcgccttg ccaaacagca ggcggcgaag ctggaaaata
     8401 tgttcaacaa tatgggcgaa acccaggccc aatctttgtc ggtcatcatc aaggcagacg
     8461 tgcagggctc ttacgaggct ttggcgggca gcctgaaaaa actgtccaca gacgaagtga
     8521 aagtgaacgt gttgcacagc ggcgtgggcg gcattaccga atcggatgtc aacttggcca
     8581 tcgcttcggg cgcattcatt atcggcttta acgtgcgtgc agatgcctct tcgcgcaaac
     8641 ttgccgaaaa tgaaaacgtg gaaatccgct actacaacat catctacgat gccatcgacg
     8701 acgtgaaggc ggcgatgagc ggcatgcttt ctccggaaga gaaagaacag attaccggta
     8761 cggtcgaaat ccgtcaggtc atctccgttt ccaaggtcgg caacattgca ggctgtatgg
     8821 ttaccgacgg tgtggtcaaa cgcgattccc atgcccgcct catccgcaac aacgtggtta
     8881 tccataccgg cgagctgtct tctttgaaac gctacaaaga cgatgttaaa gaagtccgta
     8941 tgggcttcga gtgcggcctg atgattaaag gcttcaatga aattatggaa ggcgaccaac
     9001 tggaatgctt cgacatcgtc gaagttgcac gcaccctgtg attttgatgc ggaaaaatgc
     9061 cgtctgaagc gttcagacgg catacgaaac gggttctgta tcatacagaa cccgtttttt
     9121 gtcgcaaatc ggcttcagac agccctcttg ccttatcccg atttgaatct gacttgccat
     9181 acaaacaggc ttcagacggc attatagtga attaaattta aaccggtaca gcgttggctc
     9241 gccttgccgt actatttgta ctgtctgcgg ctcgccgcct tgtcctgatt taaatttaat
     9301 tcactatatt ttcccgacag gcggatttga agtttctcca catatccggc gcgttcggcg
     9361 cggctggttt cggggcggtg cgtattgagc gacgaccatt tccaatgact gcgggctttg
     9421 ttgagttcgg gcgggagtct ggtggcgtcc cacggggctt tgcggctgtg cagctcgata
     9481 tccgactgtg ccgcgtgtcc gcgcgtttgc aggacgtgga gcaaatcgag ggcgcgggcg
     9541 gcgagcaggg tcagggtttc agggtcggtg tgcaaggttt ggcggccgga gagtttgtcg
     9601 gaaatggtgc gggtattggg caggatgccg cccaaaaagc cgccgattgc cgtacccaat
     9661 ccgagcgagc cgccgagtgt ggcgatgtcc agccccaagc cgatgagtgc gccggttgcc
     9721 gcgcccgtgc cggtgcggat gccgtattgt ttgagcaatt cgctgtcgaa cgggtcttgg
     9781 cggaaggctt gcggcatcca gtcgccgccg tcgatttcgc tgtggtagaa acggtagagg
     9841 gcaaacagcc gctgctgcat ctgccgttcg agttggcgta tttccgcctg catggtttgc
     9901 agcacggtgg cggtatcctc gttttcgtcc acttcctgcc tgaaggcggc ggcatcgagc
     9961 aggaaatcgg cgatttcgcg gcgcgcttcg ccgtccagcc gctgccattc gcgccggcgc
    10021 atggctgtca ggcggtcaag tgtgctgcgt tcgggcaaca tggtggcgag gttttcccac
    10081 aggcgtagtt cgccttcaaa atcaaaggcg acggtgtcga accctgcgaa aacgtgcagg
    10141 tttctcctcg ccagcatggt tgtccacgat tcgggaggct gtccgccggt aaagttgaac
    10201 acgggcataa ccggtttggc gcaccatgaa aggataatca attcatcccg atatttgtcg
    10261 agaacgggtt cgcgcgcgtc gatgacgtac attgccatat cgctttgcaa gacttgccgt
    10321 aagactttgg cttcctgatt gaaatcatgg tgcgcgccgt ggctgccgag aaactgttgc
    10381 agccgttcga tgccgtctga acgattgtcc gtatggtttt ccagccattc cagcacgccg
    10441 cccgcgtctt cgagtccggg cgtgtcgtac aggaaaacca gcgtgtctgc gccgtcgctg
    10501 atggcggctt cttcgacatg acgcgtggtc gatggggcgt ttctgacttc gccgaaaccg
    10561 ctgtcgcgca aaagggtacg caggagcgag gttttgccgg tgttggtatg cccgacgacg
    10621 gcgagggaaa ggggttgttt gttcatgatg tttttgaaga atggattttc agacgacctt
    10681 ttaaggatgg cggctttatg gggcgtttca agtgcggtcg ttggttttca gacggccttc
    10741 ctgcgccgct ctgtcgggtt ccagccacgc cgcgccgcat tcggccagcg cgttacgcca
    10801 atgttccagc ttttccgaaa ggtcgtctga aagcccctgt tccgccaaaa gctgcaccac
    10861 cgcgccgccc tgcgccgctt ccgagagtcg gacaatctgc cgcaacacac cccggtccgg
    10921 cacagtttgg gcgcgcacgc cgataagcag ttgcgccggt ttctgcttca actccgcttc
    10981 cagcgcggcg acctgttccc gattggcggc aacaccttta tccagccatt cctgcgccag
    11041 cctgccctcg aaccacgcgc cgtcctgcca ctcggtctcc aacatgaccg cccatttcgg
    11101 tgcatcgttc aagatgattt tcggtgaaac ggcggacacg gtttcccgac gcgtatccgc
    11161 atcggtgatt ttgttctgcc agcggcggat gaccgcctga taatagggct tttccaaatc
    11221 caagccgttc tcgcttgttt tcaaaaggat tttacacact acccaagcca gcaggcgcgg
    11281 caggatgccg tagcaggcga tactgccgac cagcagcccc gaccaagccc gcgcatcggc
    11341 aatattgccg ttcagacgac cttcgatgac cgctcgcgca tcaggcacgg gaaaacccag
    11401 tttcgcaggc agccatgcca acatttccac cagccgtacc gaagacgaat cgcccaacag
    11461 cgtgctttcc cagttgaacg tatattgccg caccaaaagc agcaacaata ccgacaccag
    11521 cattccgagc agcgtgcaga gccacaggct gtgcgacgtt gcgcctattt tccaacgtac
    11581 cgaaggttgc cgccactcgt ccgcatacag ccgcaacacc gcctgattta cagggtcttt
    11641 gccccgaaac cacgtcgccg gactgctgaa aaaacgcccc actttcacgc gcaggaacaa
    11701 cattgccaac catactgcca acataagcgt attcatgccc aacacgcccg ccaaaatcag
    11761 gaagaaattc agcccctgat tgtccattag aagataagtg cctgaaaatc cggcggtaaa
    11821 catcatcgat gccgccacca cccacaacca gaacgacccc gcacgcacac gttccaacgt
    11881 ctcccgcagc atacggttcc tgtcaatcat ctccgcccga cggatgattt tttcctccgt
    11941 actgccgtcc acgcggcgca aagcctccgt cgcctgcacg ggatcgccgc tgaaaataaa
    12001 gccgccttct tccaaaatac ggaccagctc aaccagtttt cgggatggat tcaacataaa
    12061 atgccgtctg aaaataaaaa acagatttta acacacgaat tttcaagaat attcacagtg
    12121 taggcaaaga gtaaatccca cacagaggca aaagtatcgg cgtaaactga ctgcctctac
    12181 tttcccgaaa gattgtgcga tgtatacagg cgaacgcttc aatacttaca gccatttgag
    12241 cggtttgatt ctggcggcgg caggtttggt gctgatgctg ctgaaaacca taggacacgg
    12301 ggacggctac cgtatcttca gcgtatcggt ttacggcatc agccttcttc tgctctattt
    12361 gagttcctcg ctgtaccacg gaattgcagc cggaaaactg aaaagcattt tgaaaaaaac
    12421 cgaccactgc atgatttatg tcctgattgc cggaagctac acaccgtttg cactggtttc
    12481 tttgagaaac gggccgggct ggacggtatt ttcactgtcc tggctgctgg cggctgcagg
    12541 aatcgcacaa gaactcacca ttggacggaa aagcgaaaaa cgactgctgt ctattgcgat
    12601 ttatatcgta atgggctgga tggtcttggc ggtaatgaaa tccctgacag cctcactccc
    12661 gccggcagga ctggcttggc tggcggcagg cggtatgctg tacagcgtcg gcatttactg
    12721 gtttgtaaac gatgaaaaaa tccgacacgg gcacggaatc tggcatctgt tcgtattggg
    12781 cggcagcatc acccaatttg tcagcgtgta cggttacgta atctgaatgc cgtctgaaaa
    12841 gcaaaacctc ccgatcctga agattgggag gttttctgtt tgccggacat cagcccttgt
    12901 cgtggaactc gtggaattca tactgatagg acaaatcccg acccgctttt ttctgtgcca
    12961 aataatcatc ataaatggca cggatttcct tacgcaacaa aaacagggct atcaagttcg
    13021 ggataaccat aaagccgttg aacatatcgg acaggctcca aaccaaatcg actttgccga
    13081 gcgtacctaa aacgatggca agcagaacca atgcgcgata gatgcccaag tgtcttcccc
    13141 tgaaaagaaa acggatgttg gactcaccga aataatacca gccgataatg gtcgtcaagg
    13201 cgaagaaggt cagacacacg gcaagcaatt gcgaaccgaa gcccggaaat gccttgttaa
    13261 aggcaaattg agtaaccgcc gcgccctgtt cgcccgaaag gttggcatcg gtcagcagga
    13321 taatcagcgc agttgccgta cataccaaaa tcgtatcgat aaacacaccg acaaatgccg
    13381 ccataccttg ctgcacagga tgcttcacat ccgcagtcgc gtgggcgtgc ggagtcgaac
    13441 ccatccccgc ctcattggaa aacagaccgc gcgccacgcc gaaacgtatc gcttcgcgca
    13501 taccgatacc cgccgcaccg cccaaaacgg cttcgggatt gaaggcggcg gtaaagatgt
    13561 ggttgaacat cggcacaata tggtcggaaa attcaaacag gataacgacg gcgcacaaaa
    13621 tataaacaac cgccataaac ggcacgacaa attgggcaat attggcaata cggttcacgc
    13681 cgccaatcac aaccatgccc gcaaggacgg caagcacaat accgactgcc aaagaaggca
    13741 catcaaatgc aatggtaacg gcagaagcaa tggagtttgc ctgtgtcgca ttaccgataa
    13801 agcccaatgc gataatcaac gcaatggaaa agaaaccgga caaaaaacgc gccgctcccc
    13861 tgccgatttt cggagtcaga ccgtgggtga tgtagaacgc cggcccgccg atgtatttgc
    13921 cgtggctgac gacgcggtat ttctgcgcca gcagtgcctc cgcaaaaatc gtggacatcc
    13981 ccaaaacggc agaaacccac atccaaaaaa tcgcgcccgg cccgcctgcg gtgatggcgg
    14041 tcgccacgcc ggcgacgttg cccgtaccga tttgcgcgga tatggcaacc gccaacgcct
    14101 gaaactgcga taaagacttg tcgtctttat cgcctttggc aaacaagccg ccgaatacgg
    14161 atttgaatcc cgcgcccagc ttggtaatct gcggcgcacc aagatacagc gtaaaaaaca
    14221 ggccgatacc caaaagcgcg taaatcagca ggtagtccca aaggaaccga ttgactgtac
    14281 ccaccagaac agacaatata ttttccataa aataaacctt atcttacaat taaaatgact
    14341 gccttccaaa agacattcca ataaggaaac acggcgagca gaccgtattt gccgcaacag
    14401 atgccttaaa ttgtcaacaa tcggggagaa gctgcgccat cataccgtaa aatatcgtta
    14461 attaaaacat ttctttattt ttaagcggaa agcggaggaa atcgctttca gacagcatag
    14521 acaacggcac ggcataaaac aggatatttt gggtacttgc aacttatgtt aaaatgccga
    14581 ccgtaaaaaa tctgacaaaa acagattaat tatttgaaat aagaaaggaa atttatggca
    14641 ggccatagca agtgggcgaa tatccagcat aaaaaagccc gtcaggatgc caaacgcggc
    14701 aaaatcttca cccgtttaat caaagaaatc accgttgcgg cgcgtatggg cggcggcgac
    14761 cccggtgcca acccgcgcct gcgcctggct ttggaaaaag cagccgaaaa caatatgccc
    14821 aaagacaatg tgcaacgcgc catcgataaa ggtacgggca acttggaagg cgtggaatac
    14881 atcgagttgc gctacgaagg ctacggcatc ggcggcgcgg ctttgatggt ggactgcctg
    14941 accgacaaca aaacccgcac cgttgcggac gtacgccacg cgtttaccaa aaacggcggc
    15001 aacttgggta ccgacggctg cgtggcgttc aacttcgtgc atcagggcta tttggtattc
    15061 gaacccggcg ttgacgaaga cgcgctgatg gaagcggctt tggaagccgg tgcggaagac
    15121 gtggttacca acgacgacgg ttccatcgaa gtcattaccg cgccaaacga ttgggcgggc
    15181 gtaaaatccg ctttggaggc ggcaggttac aaatccgttg acggcgacgt tacgatgcgc
    15241 gcccaaaacg aaaccgaact ctccggcgac gatgccgtca aaatgcaaaa actgattgac
    15301 gcgctggaag acttggacga cgtgcaagac gtttacactt ccgccgtatt gaatctggac
    15361 tgatacgcag cacagcagac atacaataaa atgccgtctg aacctttcag acggcattga
    15421 tttatttagc ccttgcccac gcccaccaaa ccgtcaggac aaccgccaga aaatacgccg
    15481 cgctccaaac aggcaaagca acccctaaca gataatccgg ttcggcacaa tttccgaacc
    15541 cgcgcacgac aggctcgaac caatcaaaca aagaccagcc cttcaagcgg aacgtccacg
    15601 gcgcaccgca cgaaggagcc gtacccggcg gcagcgactg caaccacaac tgatatgccg
    15661 caacagaaat acccgtaacg gccggaatgc tgataaagac agcaccgaac aaaccgcccg
    15721 cccttcttct tggtctgcac atcaggacaa ttgccgtaca caatgcggtt gccaaaacgc
    15781 ataaccgctg actgatacac aaaacgcaag gctccatacc caaaacatac tgtgccgcca
    15841 aagaaccggc aaatgcacag accgaaacgg caaacagcag ccaaacggct tttctaaata
    15901 acggggtcat tttctcaaca caccaatcaa aataccgata tgccgatttt gctggatata
    15961 tcccgagatg gcaagggacg aatcgacacc ggcgcaggtg cggacgattt cggttttccc
    16021 gatatacaca agacctgaca agggacaaaa cggcgatttg cccgcacaat gcccgcaaaa
    16081 aaatacatcc ggaggatttg aatttcggca aatttagcga atcaaaagtt tatttcaatg
    16141 aaattatatg atttttttga ataagcggat tgacaggttt ttgaaggaat ttgttaccgg
    16201 atagccatcg ggcaagtttt ttgcaaaatt tgaatcggtc gggtaaattt tcaaaaaata
    16261 attgacagcg gataagaaac ggcggataat tctcgccgtc gagttgcttg atgcagcttg
    16321 atttttctcc tctatttctc ctttgtagac ttggcacaca ttcaaccgga tgtgtgcatt
    16381 tttttatctc cgcttttttt gaaatttaat tacttttatt gtttgaaatt ccattcttta
    16441 agaaatttaa caagaaaaac gcttgctttt tgaccggaaa agctgcataa ttcgttccgt
    16501 tagctggttc gagtagtcag ttaatagttt ctcctctatt tctcctttgt agacttggca
    16561 cacattctat tgaatgtgtg cattttttta tctgaagcaa caagcctctg tgcgtgatgt
    16621 tgttatgttt catttaggtg tcaaaccgca tatccggtct gaaatattca atccaaatcc
    16681 aaaaccggat tttctttgac ctcctccatc acaacataac tcctactctc cgaagcggca
    16741 ggcagttgca ataggatatt gcctagcata tcccgatagg cagacatatc gggcaaacgt
    16801 actttaatca gatagtcgta ttcgcccgac accaagtggc attccataat ttgcggaatt
    16861 ttcagcactt cttttttgaa atcttcgaaa atattgcccg atttggattg cagcttcagc
    16921 tcgacaaaaa ccaatagtgg tttgcccaac agatggggat tgaggtgggc gtgatagccg
    16981 gaaatataat gttcccgctc caaacggcgc accctctctg taacgggcgt ggtggacaag
    17041 cctaccttct cggcaagctc cgtcatcggg atgcgggcat tctgttgaag gatcttaaga
    17101 atgcggaaat cgattttatc tagttctttc atttggattg ccttgtattt attattgatt
    17161 ttaacaaata gagtat
//
LOCUS       DAWITQ010000025        16946 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.025, whole genome shotgun sequence.
ACCESSION   DAWITQ010000025 DAWITQ010000000
VERSION     DAWITQ010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16946)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16946)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16946
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.025"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(93..932)
                     /locus_tag="WIX18_000711"
     CDS             complement(93..932)
                     /locus_tag="WIX18_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c5 family protein"
                     /protein_id="HEZ5237855.1"
                     /translation="MKQLRDNKAQGSALFTLVSGIVIVIAVLYFLIKLAGSGSFGDVD
                     ATTEAATQTRIQPVGQLTMGDGIPVGERQGEQIFGKICIQCHAADSNVPNAPKLEHNG
                     DWAPRIAQGFDTLFQHALNGFNAMPAKGGAADLTDQELKRAITYMANKSGGSFPNPDE
                     AAPADNAASGTASAPADGAAPAEAKAEDKGAAAPAVGVDGKKVFEATCQVCHGGSIPG
                     IPGIGKKDDWAPRIKKGKETLHKHALEGFNAMPAKGGNAGLSDDEVKAAVDYMANQSG
                     AKF"
     gene            1217..1292
                     /locus_tag="WIX18_000712"
     tRNA            1217..1292
                     /locus_tag="WIX18_000712"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1250..1252,aa:Arg,seq:ccg)
     gene            complement(1357..2550)
                     /locus_tag="WIX18_000713"
     CDS             complement(1357..2550)
                     /locus_tag="WIX18_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HEZ5237856.1"
                     /translation="MYRHIEYYPGDPILSLVETFKNDPRPEKVNLSIGIYFDDEGKMP
                     VLESVRRAETARAATPAPSPYLPMEGLDTYRSAVQHLLFGKDNPALAQGRIATVQTLG
                     GSGALKVGADFLHRWFPEARAYVSDPTWDNHRGIFEGAGFEVGTYPYYDPATVGVKFD
                     EMTAFFNTLPENSVLILHPCCHNPTGVDMSEQQWDEVLHIIKTRKLIPFMDIAYQGFG
                     GDLDSDAYAVRKAVEMELPLFVSNSFSKNLSLYGERVGGLSVVCPNKEEADLVFGQLK
                     FTVRRIYSSPPAHGAYIAADVMNSPELYALWQNEVYMMRDRIRAMRQKLYDVLTAQIP
                     DRDFTYFIKQRGMFGYTGLSVEQVRRLRDEFAVYLLDSGRMCVAGLNTSNTDYVARAF
                     AEVLK"
     gene            complement(2571..3659)
                     /gene="trmA"
                     /locus_tag="WIX18_000714"
     CDS             complement(2571..3659)
                     /gene="trmA"
                     /locus_tag="WIX18_000714"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HEZ5237857.1"
                     /translation="MNDYTQQLQGKKDYLKTLFAGLDVPEWEVYESPDKHYRMRAEFR
                     IWHEGGEMFYAMFEKGQKASGASMIRCDRFEAASEAVNRLMPELIAAAAQSPELKKRW
                     YAVEFLSTLSGEMLVTMIYHKRLDAEWMQAAQALQQQLDISVIGRSRGQKIVLKQDYV
                     TETLKVGNRDFRYRQIEGSFTQPNAAVCQKMLEWACGAAEGLDGDLLELYCGNGNFTL
                     PLSEKFERVLATEISKTSISAAQWNIEANRIGNIKIARLSAEEFTEAYTRKREFKRLK
                     DGGIALTDYAFSTIFVDPPRAGIDEETLKLVSQFDNIIYISCNPETLRANLDTLVETH
                     AVERAALFDQFPFTHHIESGVLLKKKIL"
     gene            3806..4906
                     /gene="aroC"
                     /locus_tag="WIX18_000715"
     CDS             3806..4906
                     /gene="aroC"
                     /locus_tag="WIX18_000715"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEZ5237858.1"
                     /translation="MAGNTFGQLFTVTTFGESHGAGLGCIIDGCPPGLELSEADIQFD
                     LDRRKPGTSRHVTQRREADQVEILSGVFEGKTTGTPIALLIRNTDQRSKDYGNIATSF
                     RPGHADYTYWHKYGTRDYRGGGRSSARETAARVAAGAVAKKWLKEKFGTEITAYVTQV
                     GEKEIRFEGCEHISQNPFFAANHSQIAELENYMDGVRKSLDSVGAKLHIEAANVPVGL
                     GEPVFDRLDAEIAYAMMGINAVKGVEIGAGFDSVTQRGSEHGDELTPQGFLSNHSGGI
                     LGGISTGQDIRVNIAIKPTSSIATPRRSIDINGNPIELATHGRHDPCVGLRSAPIAEA
                     MLALVLIDHALRHRAQNADVQVNTPDITLSNK"
     gene            4998..5423
                     /locus_tag="WIX18_000716"
     CDS             4998..5423
                     /locus_tag="WIX18_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmoprotectant transport activator ProQ"
                     /protein_id="HEZ5237859.1"
                     /translation="MTQETALGAALKSAVQTMSKKKQTEMIADHIYGKYDVFKRFKPL
                     ALGIDQDLIAALPQYDAALIARVLANHCRRPRYLKALARGGKRFDLNNRFKGEVTPEE
                     QAIAQNHPFVQQALQQQSAQAAAETLSVEAEAAESSAAE"
     gene            complement(5497..7482)
                     /gene="parE"
                     /locus_tag="WIX18_000717"
     CDS             complement(5497..7482)
                     /gene="parE"
                     /locus_tag="WIX18_000717"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HEZ5237860.1"
                     /translation="MAKNNQYSESSITVLKGLEPVKERPGMYTRTDSPTHICQEVIDN
                     AADEALGGFATAIDVQIHEDGSLSVRDNGRGIPVGLHPEEGVPVVELVFTRLHAGGKF
                     NKKDGGSAYAFSGGLHGVGVSVTNALSTRLEVTVKREGKIHRIVFAGGDVVEPLAQVG
                     KCAVKDSGTEVRVWPDGKYFESPNYSIPELERLLRAKAVLLPGVRVSLTRPVKGEDEA
                     HTQTWHYPDGLKSYLTDLIADAQEAVPLFSCENYISDEHNGDFSIGEGAAFALTWLEE
                     GSCANESYVNLIPTPLGGTHEAGLKQAVFNAVNNFINLHNLLPRGVKVQSDDVFGKTA
                     FVLSARVLDPQFQGQTKDKLTNRDALKLVAAVAGDPLELWLNQNVDFGKKIAELAIRQ
                     AQARMRSVKKIEKKKGSGVAVLPGKLTDCESEDIRENELFLVEGDSAGGSAKLARDKA
                     TQAILPLRGKVLNSFEVHPDQLFGNAEIHDISVAIGVDPHGINDHPDLSGLRYGKIAI
                     LSDADVDGSHIQVLLLTLFYRHFPKLVADGHIYVAQPPLFRVDVNAQGKSKPARKFYA
                     LDQNELDGILERLQKEGVKETAYSISRFKGLGEMNPDQLKDTTMHPDTRRLLQVQIPE
                     GADDETRDIFVKLMGKGEAAARRAWMEREGDTAELDI"
     gene            complement(7549..8073)
                     /locus_tag="WIX18_000718"
     CDS             complement(7549..8073)
                     /locus_tag="WIX18_000718"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HEZ5237861.1"
                     /translation="MLDREGYRPNVGIILINNRDEVFWGKRVREHSWQFPQGGIKPGE
                     SPETAMYRELYEEVGLLPQHVKIIGRTRDWLRYDVPNNWVRREWRGSYRGQKQIWYLL
                     RLTGRDCDVNLRATRHPEFDGWRWHQYWAPVDEVIDFKRDVYLGALKELSSRFLRGME
                     SYEDFAARQSSDNR"
     gene            8239..9534
                     /gene="serS"
                     /locus_tag="WIX18_000719"
     CDS             8239..9534
                     /gene="serS"
                     /locus_tag="WIX18_000719"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HEZ5237862.1"
                     /translation="MLDIQLLRSNTAAVAERLAARGYKFDAARFNALEEQRKAVQVKT
                     EELQASRNSISKQIGALKGQGKHEEAQAAMDQVAQIKTDLEQAAADLEAVQKELDAWL
                     LSIPNLPHEDVPFGKDETENVEVRKVGTPREFDFEIKDHVDLGEPLGLDFEGGAKLSG
                     ARFTVMRGQIARLHRALAQFMLDTHTLKHGYTEHYTPYIVDDTTLQGTGQLPKFAEDL
                     FHVTRGGDESKTTQYLIPTAEVTLTNTVAGSIIPSEQLPLKLTAHSPCFRSEAGSYGK
                     DTRGLIRQHQFDKVEMVQIVHPEKSYETLEEMVGHAENILKALELPYRVITLCTGDMG
                     FGATKTYDLEVWVPAQNTYREISSCSNCEDFQARRMKARFKDENGKNRLVHTLNGSGL
                     AVGRTLVAVLENHQNADGSINIPAALQPYMGGVAKLEVK"
     gene            complement(9612..10610)
                     /locus_tag="WIX18_000720"
     CDS             complement(9612..10610)
                     /locus_tag="WIX18_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HEZ5237863.1"
                     /translation="MKIAIYGTKSYDREHFTRANRHFGFELEFFDFMLDAKTAKMAEG
                     AEAVCIFVNDDGSRPVLEKLAQIGVKTVALRCAGFNNVDLKAAEELGLKVVRVPAYSP
                     ESVAEHTVGLMLTLNRRIHKAYQRTRDANFSLEGLTGFNMYGKTAGVIGTGKIGIATM
                     RILKGFGMNLLAYDPFCNPEAEKIGGRYVELNELYARSDIITLHCPSTPENHYMLNEA
                     AFDKMKDGVMIINTSRGGLIDSSAAIEALKRRKIGALGMDVYENERELFFEDKSNDVI
                     TDDVFRRLSSCHNVLFTGHQAFLTEEALGNISEVTLSNIREVGQTGDCGNAVRADG"
     gene            complement(10735..11811)
                     /gene="prfA"
                     /locus_tag="WIX18_000721"
     CDS             complement(10735..11811)
                     /gene="prfA"
                     /locus_tag="WIX18_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003790927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HEZ5237864.1"
                     /translation="MKPSILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAE
                     LTPVVEVFQNYRLAQSDLADAEEMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLP
                     KDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYK
                     EVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELN
                     PADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAA
                     RLNDAQKREAQAKEAAERKSLIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMD
                     GDLAEITNALIAEHQAELLAAMGD"
     gene            complement(11901..12671)
                     /locus_tag="WIX18_000722"
     CDS             complement(11901..12671)
                     /locus_tag="WIX18_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEZ5237865.1"
                     /translation="MRLTDTHCHLADSVLRGNLAQVLAEARQAGVWRFIVPATRPQDW
                     QSVAELSEMPSEHGQIRIALGIHPWFSDGIAERDCVRLEAMLARYPQAWVGEIGLDFY
                     DKTQTPPQRERQIQVFVRQLAIAQTLRRRVIIHNLKATADIAAAVKQTGFAQGGIVHA
                     FSGSAEEARVLTKLGFKIGIGSLLLNPNARKVRDTLKALNDGDFVLETDSPFMLKKEI
                     NTPANILWIAEIAAQIRGVGVADIAAITERNADSLLRP"
     gene            complement(12674..13666)
                     /locus_tag="WIX18_000723"
     CDS             complement(12674..13666)
                     /locus_tag="WIX18_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HEZ5237866.1"
                     /translation="MKQKIFVLYTGGTIGMTQSSEGLRPDTALVGQALAPFSNGMDFD
                     WHVCGTLIDSSAVQLQNWCAWLDIIAAALPQYDGVLVLHGTDTLAYTANLFALALQGL
                     DKPIVLTGSQWPYNAVGSDAPRNLATAVAAFPLGLKQTLIAFDGKLYPAVGSSKVSTE
                     TAAGFDNPHFGALAEWDETQGWHNVRIPNQDAADVSDGLKIRYPDPQAKIAVRTLIPG
                     FAVQELADGLGQLPAHALILQSYGHGNTPADEGFIRAVQDFTQQGKLLLNISQVRQGR
                     TAAVYAQGNAFRNSGIINGGKCNLETATALMTLAVSEGWGADEVKHELQRLGLV"
     gene            complement(13733..14416)
                     /locus_tag="WIX18_000724"
     CDS             complement(13733..14416)
                     /locus_tag="WIX18_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEZ5237867.1"
                     /translation="MFALLEAFFVEYGYAAVFFVLVICGFGVPIPEDLTLVTGGVISG
                     MGYTNPHIMFAVGMLGVLVGDGIMFAAGRIWGQKILKFKPIARIMTPKRYAQVQEKFD
                     KYGNWVLFVARFLPGLRTAVFVTAGISRKVSYLRFLIMDGLAALISVPVWIYLGEYGA
                     HNIDWLMAKMHSLQSGIFIALGVLAAALAWFWWRKRRHYQLYRAQLSEKRAKRKAEKA
                     AKKAAQKQQ"
     gene            complement(14605..15939)
                     /gene="glmM"
                     /locus_tag="WIX18_000725"
     CDS             complement(14605..15939)
                     /gene="glmM"
                     /locus_tag="WIX18_000725"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEZ5237868.1"
                     /translation="MAKKYFGTDGVRGEVGQFPITPDFVLKLGYAAGQVLVQHDTDQK
                     PTVLIGKDTRISGYMLEAALVAGFTAAGVNVIQTGPLPTPGVAYLTRALRLSAGVMIS
                     ASHNAYSDNGIKFFAEGGVKLSDEIELEIEAKIDEEMKTQPSARLGRARRISGADDRY
                     IEFCKSTFPSHSDLRGLKLVIDTANGAGYGVAPKVFHELGAQVVSIGDEPNGYNINEK
                     CGATYTKTLQAAVLQHEADYGIALDGDGDRLMMVDKNGKVYDGDSLIYVIAKARAREG
                     INIGGVVGTVMTNMAMEIALKEQGVDFCRAKVGDRYVLEQLNQRGWLVGGEASGHILC
                     MDKHNTGDGIISALQVLAALQTLNQDLAAVCADWQPYPQTMINVRIGKGQNWQEASKD
                     VLAEVEKELEGKGRVVLRASGTEPVVRVMVEARQADWARDGAERIASAIGSL"
     gene            complement(16069..16920)
                     /gene="folP"
                     /locus_tag="WIX18_000726"
     CDS             complement(16069..16920)
                     /gene="folP"
                     /locus_tag="WIX18_000726"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEZ5237869.1"
                     /translation="MARHGWQAGRFEIGLDKPKIMGIVNLTPDSFSDGGAYSQNAKTA
                     LAHAERLLKEGADILDIGGESTRPGADYVSSEEEWARVEPVLVEVAGWGVPVSLDTRR
                     TVVMEKALALGGIDIINDVAALTDEGAVELLARQTDTGICLMHMQGLPETMQINPKYQ
                     DVVGEVARYLKARAAECIAAGIAPQRITLDPGFGFGKTLQHNIALMRHLPELMAETGF
                     PLLIGVSRKRMIGELTGEADAAARVHGSVAAAVAAVARGAQIVRVHDVKATADALKVW
                     EALGINL"
BASE COUNT         3758 a         4742 c         4546 g         3900 t
ORIGIN      
        1 tcctgatttt tgttaattca ctataaattc ccataaaaaa acggagcaga tacctgcccc
       61 gtttttattt aatccgaaat tttaatctaa atttaaaatt ttgcaccgga ttggtttgcc
      121 atataatcaa cagccgcttt gacttcgtca tcgctcaaac cggcattgcc gcctttggca
      181 ggcatcgcgt taaagccttc aagggcgtgt ttgtgcaagg tttctttgcc ttttttgata
      241 cgcggtgccc aatcgtcttt tttgcctatg ccgggaatac cgggaatcga accgccgtgg
      301 cacacctgac aggttgcttc gaagactttt ttaccgtcaa cgccgaccgc aggggctgcc
      361 gcacccttgt cttctgcctt cgcttctgcc ggagctgcac catcggcagg agcagaagct
      421 gttcctgaag cggcattgtc ggcaggcgca gcctcatcag gattcgggaa agaaccgccg
      481 cttttgttcg ccatgtaagt aatcgcccgt ttgagttcct gatcggtcag gtctgccgca
      541 ccgcctttgg caggcatggc gttaaagccg ttcagcgcgt gttggaacaa ggtatcgaag
      601 ccttgcgcga tacgcggtgc ccaatcgccg ttgtgttcca gtttcggagc gttcggcaca
      661 ttgctgtccg ccgcgtggca ttggatacag attttgccga aaatctgttc gccttggcgt
      721 tcgccgacgg ggatgccgtc gcccatcgtc aattgtccga cgggctggat acgggtctgc
      781 gttgccgctt ccgtagtggc atcgacatcg ccgaacgagc cgctgcccgc cagcttaatc
      841 aggaaataaa ggactgcaat aacaataacg ataccgctca caagggtaaa cagtgcagag
      901 ccttgggctt tgttgtcgcg gagttgtttc atttggtagg cctcgccgtc aggttaggtt
      961 gtgctgtaaa ttatagtttg gtgtgttaaa cgcagttaac aatattttgc tggattatac
     1021 tgaattcaca gggtctttcc aatcgctatc attgaaaata tgaaaaaatt tgccaacggt
     1081 atctgtataa aacaaataat cctttgaaaa taatggttta tcctcaagaa aactctcctt
     1141 atgccgccat acgccgcctg ccggcgcaag ataacctttg ccaatttgca gaatttacgt
     1201 taaccttacg ttttacgcac ccatagctca gttggaagag tgtcagtttc cgaagctgga
     1261 ggtcacaggt tcgatccctg ttgggtgcgc caattataaa gagaccgtct gaaagataaa
     1321 tatttttcag acggtctttt gacttacttc aaactcttat ttcaagactt ccgcaaatgc
     1381 gcgggcaaca tagtcggtat tcgacgtatt cagtccggcg acgcacatcc tgccggaatc
     1441 cagcaggtaa acggcaaatt cgtcgcgcag cctgcggact tgttccacgc tcaatcctgt
     1501 gtagccgaac atgccgcgct gtttgatgaa ataagtgaaa tcgcgatcgg ggatttgcgc
     1561 agttaagaca tcataaagtt tctgccgcat cgcacggatg cggtcgcgca tcatataaac
     1621 ctcgttttgc cacaaggcgt aaagttcggg gctgttcatc acgtcggcgg cgatatacgc
     1681 gccgtgcgcg ggcgggctgg agtagatgcg gcggacagtg aatttgagct gtccgaacac
     1741 caaatccgct tcttccttat tcgggcaaac cacgctcagg ccgccgacgc gctcgccgta
     1801 gagcgacagg ttttttgaga aggaattgct gacgaacaag ggcaattcca tttccaccgc
     1861 tttgcggacg gcgtaggcat cgctgtccaa atcgccgccg aagccttggt aggcgatgtc
     1921 cataaacgga atcagtttgc gcgttttgat gatgtgcaac acttcgtccc attgttgttc
     1981 cgacatatcc acgccggtcg ggttgtggca gcagggatgg aggatcagga cgctgttttc
     2041 gggcagggtg ttgaaaaacg cggtcatttc gtcgaatttc acgccaacag tggcagggtc
     2101 gtaatatggg taagtgccga cctcgaaacc tgcgccttca aaaatgccgc gatggttgtc
     2161 ccaagtcggg tcgctgacgt aggcgcgcgc ttcgggaaac cagcggtgca ggaagtccgc
     2221 cccgactttg agtgcgcccg agccgcccaa ggtttgtacg gtagcgatgc gtccttgcgc
     2281 gagcgcaggg ttgtctttgc cgaacaataa atgctgcacc gcgctgcggt aagtgtccaa
     2341 gccttccatc ggcaggtagg gcgacggcgc aggcgtggcg gcgcgggcgg tttcggcacg
     2401 gcgcacggat tccaacacgg gcattttgcc ttcgtcgtcg aaataaatgc ctatgctcaa
     2461 attgactttt tcagggcgcg ggtcgttttt gaaggtttcg accaaactca aaatcgggtc
     2521 gcccggatag tattcgatgt gtcggtacat agtccttacc ttttactttt tcaaaggatt
     2581 ttctttttca acaatacacc actttcgata tggtgcgtaa acgggaattg gtcgaacagg
     2641 gcggcgcgtt cgaccgcatg ggtttccacc aaggtgtcca aattggcacg cagcgtttcg
     2701 ggattgcagg aaatgtagat gatgttgtca aactgcgaca ccagcttcaa agtttcctca
     2761 tcgataccgg cacgcggcgg atcgacgaaa atagtggaaa atgcgtaatc cgtcaaagca
     2821 ataccgccat ccttaaggcg tttaaactca cgttttctgg tataggcttc ggtaaattct
     2881 tcagcagaca gacgggcgat tttgatgttg ccgatgcggt tggcttcgat attccattgc
     2941 gccgcgctga tggaggtttt ggagatttcg gttgccaaaa cacgttcaaa cttttcagat
     3001 aaaggaagcg taaagttgcc gtttccgcaa tacagttcga gcaaatcccc atccaatcct
     3061 tctgctgcac cgcaggccca ttcaagcatt ttctgacaca cggcggcatt cggttgggta
     3121 aaactgcctt caatttgccg ataacggaaa tcccggttgc cgaccttcaa agtttccgtt
     3181 acatagtcct gttttaagac tattttctgt cccctgctcc gcccaataac ggaaatatcc
     3241 aactgttgct gtaacgcttg cgccgcctgc atccactcag catcaagcct tttgtggtaa
     3301 atcatggtaa ccagcatttc cccgctgagc gtggacagaa attcgacggc ataccagcgt
     3361 tttttgagtt cgggggattg cgcggcggcg gcgatcagct cgggcatgag gcggttgaca
     3421 gcctcggaag ctgcttcaaa acggtcgcag cgtatcatgc ttgcgccgct ggctttctgc
     3481 cctttttcaa acatggcata aaacatttcc ccgccttcgt gccaaatacg gaactcggca
     3541 cgcatacggt aatgtttgtc cggagattcg tacacttccc actcaggaac atccaaacct
     3601 gcaaaaaggg ttttaaggta gtctttttta ccttgaagct gctgcgtgta gtcattcata
     3661 tcgctatcct gaaaaatcag accggattat aagccgattt gcctcgccgc acgcaaactc
     3721 tttgactgcc gccccttcaa tgacggacgg gcttttgtgc taaaatccgc catctttcca
     3781 cactataccg ataaagggaa aaatcatggc aggcaacact ttcggacaac tcttcaccgt
     3841 taccaccttc ggcgaaagcc acggcgcggg tttgggctgt atcatcgacg gctgcccgcc
     3901 cggcttggaa ttaagcgaag cggatatcca atttgacctc gaccgacgca aacccggcac
     3961 cagccgccac gttacccaac gccgcgaagc cgaccaagtc gaaatcctct ccggcgtatt
     4021 cgaaggcaaa accaccggca cgcccatcgc cctcttaatc cgcaataccg accagcgcag
     4081 caaagactac ggcaacatcg ccaccagctt ccgccccggc cacgccgact atacctattg
     4141 gcacaaatac ggcacgcgcg actaccgcgg cggcggcagg agctccgccc gtgaaaccgc
     4201 cgcccgcgtt gctgccggag ccgttgccaa aaaatggttg aaagaaaaat tcggcacgga
     4261 aatcaccgcc tacgttaccc aagtcggcga aaaagaaatc cggtttgaag gctgcgaaca
     4321 catttcccaa aatccttttt ttgccgccaa ccatagccaa attgccgagc tggaaaacta
     4381 tatggacggc gtgcgcaaat ccttggattc cgtcggcgcg aagctgcata tcgaagcagc
     4441 caatgtccct gtcggcttgg gcgaacctgt ttttgaccgc ctcgatgccg aaatcgccta
     4501 cgcgatgatg ggcatcaacg ccgtcaaagg cgtggaaatc ggcgcaggtt ttgacagcgt
     4561 aacgcaacgc ggcagcgaac acggcgacga actgaccccg caaggcttcc tgtccaacca
     4621 ctcaggcggc atcctcggcg gcatcagcac cgggcaagac atccgcgtca atatcgccat
     4681 caaacccacc agctccatcg ccaccccgcg ccgcagtatc gacatcaacg gcaaccccat
     4741 cgaactcgcc acgcacggca ggcacgaccc ctgcgtcgga ctgcgctccg cgccgatcgc
     4801 cgaagccatg ctcgcgttag tcctcatcga ccacgccctg cgccatcgcg cgcaaaatgc
     4861 cgacgttcag gttaatacgc ccgacattac cctttcaaac aaataaaaat ttagccaaaa
     4921 cacagacttt ataatagaat atcgagcatt gccgtgcagc cttgacgcac gggtttgttt
     4981 agaggaatac aaccgaaatg acacaagaaa ccgctttggg cgcggcacta aaatccgccg
     5041 tccaaactat gagcaaaaag aaacagaccg aaatgatcgc cgaccacatc tacggcaaat
     5101 acgatgtgtt caaacgcttc aaaccgttgg cgctcggcat cgatcaggat ttgattgccg
     5161 ctttgccgca atacgatgcc gcactgattg cacgcgtcct cgccaaccac tgccgccgtc
     5221 cgcgctatct gaaagccttg gcgcgcggcg gcaaacgttt cgatttgaac aaccgtttca
     5281 aaggcgaagt tacccccgaa gaacaggcga tcgcgcaaaa ccatcctttt gtgcagcagg
     5341 ctttgcaaca gcagtccgcc caagctgccg ccgaaacgct gtctgttgaa gccgaagcag
     5401 ccgaatcttc cgcagcagaa taaatcccca aacgaaatgc cgtctgaaaa ccgatttggt
     5461 ttcagacggc attttttcgt atgcggcaat cacggttcaa atatcgagtt ccgccgtatc
     5521 gccttcgcgt tccatccagg cacggcgggc ggcggcttcg cctttgccca tcagtttgac
     5581 gaagatgtcg cgcgtctcgt catccgcgcc ttctgggatt tgtacctgca acaggcggcg
     5641 ggtgtcgggg tgcatggtag tatctttgag ctggtctggg ttcatctcac ccaagccttt
     5701 gaaacggctg atggaataag cagtttcttt aacgccttct ttttgcagcc gctctaaaat
     5761 gccgtcaagt tcgttttggt cgagggcgta gaatttgcgg gcgggtttgc ttttaccttg
     5821 tgcgttgaca tctacgcgga acagcggcgg ctgggcgacg tagatgtgtc cgtcagcgac
     5881 cagtttcggg aagtggcggt agaacagggt cagcagcaaa acttgaatat gcgagccgtc
     5941 cacgtcggca tcggacagga tggcgatttt gccgtaacgc aggccgctta aatcgggatg
     6001 gtcgttgatg ccgtgcggat cgacgccgat ggcaactgaa atgtcgtgga tttcggcgtt
     6061 gccgaagagc tggtcggggt ggacttcaaa gctgttgagc actttgccgc gcaggggcag
     6121 gatggcctgg gtggctttgt cgcgggcgag tttggctgag ccgccggcgg aatcgccttc
     6181 gacaaggaag agttcgtttt cgcggatgtc ttcgctttcg cagtcggtca gcttgccggg
     6241 caggacggcg acgccgctgc cttttttctt ttcgattttc ttaaccgaac gcatccgcgc
     6301 ctgcgcctga cggatggcga gttcggcaat ttttttaccg aagtccacgt tttggttcag
     6361 ccacaattcc aaagggtcgc ccgctacagc ggcgacaagt ttcagcgcgt cgcggttggt
     6421 cagcttgtct ttggtctgac cttggaactg cgggtcgagg acacgggcag agaggacaaa
     6481 ggcggttttg ccgaacacgt cgtcgctttg tactttcacg ccgcgcggca agaggttgtg
     6541 cagattgatg aaattgttga cggcgttgaa cacggcttgt ttcaagcctg cttcatgcgt
     6601 gccgcccaaa ggggtgggga tgaggttgac atagctttcg ttggcacacg agccttcttc
     6661 cagccaagtc agggcaaacg ccgctccttc gccgatgctg aaatcgccgt tgtgttcgtc
     6721 tgaaatgtag ttttcgcaag agaacagcgg cacagcttct tgcgcgtcgg caatcaggtc
     6781 ggtcagatag cttttcaggc cgtcggggta gtgccaggtt tgggtgtgcg cttcgtcttc
     6841 gcctttgacc ggacgggtca gggaaacgcg cacacccggc agcagcacgg ctttggcacg
     6901 cagcaggcgt tcgagttcgg gaatgctgta attcgggctt tcaaaatatt tgccgtccgg
     6961 ccagacgcgc acttcggtgc cgctgtcttt gacggcgcat ttgcccactt gtgccaacgg
     7021 ttcgaccacg tcgccgccgg caaacacgat acggtggatt ttgccttcac gtttgaccgt
     7081 tacctcaagg cgggtggaga gggcgttggt gacggatacg cccacgccgt gcagtccgcc
     7141 tgaaaaggca tacgcgctgc cgccgtcttt tttgttgaac ttgccgcccg cgtgcagacg
     7201 ggtgaacacg agttcgacta cgggtacgcc ttcttcaggg tgcaggccga cgggaatacc
     7261 gcggccgtta tcacggacgg aaagcgaacc gtcttcatga atttgcacgt cgattgcagt
     7321 cgcgaaacca cccaacgcct cgtccgccgc attatcaatc acttcctgac agatgtgggt
     7381 cgggctgtcg gtgcgggtgt acatgccggg acgttctttg accggctcca agcctttgag
     7441 gacggtgatg ctggattcgc tgtattggtt gtttttagcc ataggaataa tctgaaagta
     7501 agaaaaacaa cgctttcaga cggcctgaaa gcgttgcgtt ccgttgtttt agcggttgtc
     7561 ggaagattgg cgggcggcaa agtcttcata actttccata ccgcgcagga agcgggaaga
     7621 gagttctttc aacgccccca aataaacgtc gcgtttgaaa tcaatcactt cgtcaacggg
     7681 cgcccaatat tgatgccaac gccagccgtc aaattcgggg tggcgggtgg cgcgcaggtt
     7741 gacatcgcaa tctcggccgg tcaggcgcag gagataccaa atctgcttct gcccgcgata
     7801 ggatccgcgc cattcgcggc gtacccagtt gttcggcacg tcataacgca gccagtcgcg
     7861 cgtgcggccg ataattttga cgtgttgcgg caaaagcccg acttcttcgt acaactcgcg
     7921 gtacatggcg gtttcggggc tttcgcccgg cttgatgccg ccttgcggaa actgccaaga
     7981 atgttcgcgc acgcgcttgc cccaaaagac ttcgtcgcgg ttgttgatta agatgatacc
     8041 gacattgggg cgatagcctt ccctgtccaa cacggtgtcg ccctccgtta aattcaatct
     8101 tgggattttc ccacaaatcg gacggttttg acaaatcgga cgatagggtt caggcatgtc
     8161 gaaacacaga cggattcggg aaaatatctt aaatttggtt tacaataata cgtttcaaat
     8221 taattcggga atcagaccat gttagatatc caattgctcc gcagcaacac cgccgctgtg
     8281 gcggaacgct tggcggcacg cggttacaag tttgatgccg cgcgtttcaa tgcgctggaa
     8341 gagcagcgaa aagccgtcca ggtgaaaacc gaagagctgc aagcctcgcg caacagcatt
     8401 tccaaacaaa tcggcgcact gaaaggtcag ggcaaacatg aagaggcgca ggcggccatg
     8461 gatcaagtcg cccaaatcaa aaccgatttg gaacaggcag ccgccgattt ggaagccgtg
     8521 caaaaggaac tggacgcatg gctgttgagc attccgaacc tgccgcatga ggacgtgcct
     8581 ttcggtaagg atgaaaccga aaacgtcgaa gtccgcaaag tcggcacgcc acgcgaattt
     8641 gactttgaaa tcaaagacca tgtcgatttg ggcgaacctt tgggtttgga tttcgaaggt
     8701 ggcgcgaaac tttccggcgc acgatttacc gtgatgcgcg gacaaatcgc ccgcctgcac
     8761 cgcgcgctgg cgcaattcat gctcgatacg cacacgctga aacacggcta caccgagcat
     8821 tacacaccct atatcgtgga cgacaccacc ttgcaaggca cgggtcagct gccgaagttt
     8881 gcagaagatt tgttccacgt tacccgtggc ggcgacgaga gcaaaaccac gcaatatctg
     8941 attccgacag ctgaagttac cctgaccaat accgttgccg gcagcattat cccgtccgaa
     9001 caactgccgc tgaagctgac cgcgcattcg ccctgtttcc gcagcgaggc gggttcgtac
     9061 ggcaaagaca cgcgcggtct gattcgccag caccagttcg acaaagtgga aatggttcaa
     9121 atcgttcatc ccgaaaaatc atacgaaacg ctggaagaaa tggtcggcca tgccgaaaac
     9181 atcctgaagg ctttggaact gccctaccgc gtgattaccc tgtgtaccgg cgacatgggc
     9241 ttcggcgcaa ccaaaacgta tgacttggaa gtttgggtac cggcgcaaaa cacctaccgc
     9301 gaaatctcaa gctgctccaa ctgcgaagat ttccaagccc gccgcatgaa ggcgcgtttc
     9361 aaagacgaaa acggcaaaaa ccgcttggta catactttga acggctccgg cttggctgtc
     9421 ggcagaacgc tggtcgccgt attggaaaac catcaaaacg ccgacggcag catcaacatc
     9481 cctgccgcac tgcaaccgta tatgggcggc gttgccaagt tggaagtgaa ataagtttgc
     9541 aagctgcctg aacgtcaaat gccgtctgaa acctggttca gacggcattt cctttaaact
     9601 tttaaaacac atcaaccgtc ggcacgaacc gcattgccgc aatcgccggt ctgtccgacc
     9661 tcgcggatat tggacagcgt aacttccgaa atattaccca acgcctcttc cgtcaaaaat
     9721 gcctgatggc cggtaaacag cacattatga caagacgaca ggcggcggaa cacgtcgtcg
     9781 gtaatcacat cgttggattt gtcttcaaaa aacaattcgc gttcgttctc gtacacgtcc
     9841 atacccaatg cgccgatttt ccggcgtttc aacgcctcaa tcgcggcaga actgtcaatc
     9901 agaccgccac ggctggtgtt gataatcatc acgccgtctt tcattttgtc gaacgccgct
     9961 tcgttcagca tatagtggtt ttccggcgtg gaggggcaat gcagcgtgat gatgtccgac
    10021 cgggcataca gctcgttcaa ctccacatac ctgccgccga ttttttccgc ttcggggttg
    10081 caaaacggat cgtaagccag caggttcatg ccgaaaccct ttaaaatccg catggttgca
    10141 ataccgattt tccccgtgcc gataacgccc gccgttttgc cgtacatatt gaaaccggtc
    10201 agaccttcca gcgaaaaatt cgcatcgcgg gtacgctgat aggctttgtg gatacggcgg
    10261 ttcaacgtca gcatcagacc gaccgtatgt tccgcaaccg attcgggcga ataggcaggc
    10321 acgcgcacga ctttcaagcc caactcttca gccgccttta aatccacatt attgaagccg
    10381 gcacaacgca acgccacagt tttcacgcca atttgcgcca atttttccaa cacgggccgg
    10441 ctgccgtcgt cgtttacaaa aatacagacc gcttccgcgc cttccgccat tttcgccgtt
    10501 ttcgcatcca gcataaaatc aaaaaactcc agctcgaagc cgaaatgccg gttggcgcgg
    10561 gtaaaatgtt cgcggtcata gcttttcgta ccgtaaatcg caatcttcat caatatgtcc
    10621 agttgtcgcc tatggttgag aaacggcata atacactgaa ttcaaacaaa tcagtagaat
    10681 atggcagatt aaaattgatt gcatacacgg catttccatt tcaaaacaca aaactcaatc
    10741 gcccattgcc gccagaagct ccgcctgatg ctcggcaatc agggcattgg tgatttctgc
    10801 caagtcgccg tccatcacaa aatccagctt gtgcagggta aggttgatgc ggtggtcggt
    10861 taccctgcct tggggatagt tgtaggtgcg gatgcgttcg ctgcggtcgc cgctgccgat
    10921 gagggatttg cgctcggcgg cttctttggc ttgggcttcg cgtttttgcg cgtcgttcag
    10981 gcgggcggcg aggactttca ttgcctgcgc tttgttggca tgttggctgc ggccgtcttg
    11041 gcattcgacc accatgccgg tgggcaggtg ggtgatgcgg acggcggagt cggttttgtt
    11101 gatgtgctga ccgcccgcgc cagatgcgcg gaaggtgtcg atgcgcaggt cggctgggtt
    11161 cagttcgatg tcttccagtt cgtccgcttc gggcatgacg gcaacggtgc aggcggaggt
    11221 gtggatgcgg ccttggcttt cggtggcggg gacgcgctgc acgcggtgtc cgcccgattc
    11281 aaatttcaaa cggctgtacg ccccgagtcc gacaatacgg gcgatgactt ctttatagcc
    11341 gcccaattcg ctttcgttgg cggacacgat ttcaacctgc caacggttgc gctcggcgta
    11401 gcggctgtac atacgcagca aatcgccggc aaacagcgcg gcttcgtcgc cgcccgttcc
    11461 ggcgcgtatt tcgatgaaga tgtttttgtc gtcgtcggca tctttgggca gcagcagttt
    11521 ttgcagttcg gtatcgagcg tgttgatttt ggcttttgcc gcttcgattt cttcggcggc
    11581 aaaatctttc atttcggggt cggacaacat ttcttcggca tccgccaagt cgctttgggc
    11641 aagccgatag ttttggaaca cttcgacgac gggggtcagt tcggcgtgtt cgcgcgtgag
    11701 cttgcggtag ttgtccatat ctgccgtggc ttcgggttgc cctaaaaggt gggtaacttc
    11761 ttccaaccgg tcgccgagtt gttgcagttt ttctaagata gacggcttca taattcttcc
    11821 ataacaaacg ccgcctgaat ttcagacggc atcaaaacgc ggtcattata atatattttc
    11881 tgaatattca aaaagataat ctagggacgg agcaggctgt cggcattgcg ttccgttatc
    11941 gcggcgatgt ccgccacgcc gacaccgcgt atctgcgcgg caatttcggc aatccaaaga
    12001 atattggcag gcgtattaat ctcttttttc agcataaacg ggctgtcggt ttccaatacg
    12061 aaatccccgt cgttcaaggc tttaagcgta tcgcgcactt tacgcgcgtt cggattgagc
    12121 aacaacgaac cgatgccgat tttgaaaccc agtttcgtca acacgcgcgc ttcttccgcg
    12181 ctgcctgaga aggcgtgaac gatgccgcct tgggcaaagc ctgtctgttt gacggcggcg
    12241 gcgatgtcgg cggtggcttt gagattatgg ataatcacgc ggcggcgcag ggtttgcgcg
    12301 atggcaagct ggcggacgaa aacttggatt tgccgttcgc gctgcggcgg cgtttgggtt
    12361 ttgtcgtaaa aatccaaacc gatttcgccg acccatgcct gcggataacg tgccaacatc
    12421 gcttccaggc ggacgcaatc acgctcggca atgccgtctg aaaaccaagg atggatgccg
    12481 agcgcaatac ggatttgacc gtgttcggac ggcatttccg acagttccgc cacgctttgc
    12541 caatcctgcg ggcgcgtcgc gggaacgata aaccgccaca cacccgcctg tcgcgcttcg
    12601 gcaagcacct gcgccagatt gccgcgcaaa acagaatcgg caagatggca atgtgtgtcg
    12661 gtcagcctca tcttcacacc agccccaacc gctgcaactc gtgtttcacc tcgtccgcgc
    12721 cccatccttc agaaacggca agcgtcatca atgcggttgc ggtttccaaa ttgcatttgc
    12781 cgccgttgat gatgcctgag ttgcggaacg cgttgccttg cgcgtaaacg gcagcggttc
    12841 tgccttgtcg gacttggctg atgttgagca gcagtttgcc ttgctgcgta aagtcttgca
    12901 cggcgcggat gaaaccttcg tctgcgggcg tgttgccgtg tccgtaactt tgcaggataa
    12961 gggcgtgggc gggaagctgt ccgagtccgt cggcaagttc ttggacggca aagccgggga
    13021 taagcgtgcg gacggcgatt tttgcctgcg ggtcgggata acggattttg aggccgtctg
    13081 aaacatctgc cgcgtcctga ttcgggatgc ggacattgtg ccagccctgg gtttcgtccc
    13141 actccgccag tgcgccgaaa tgcggattgt cgaaaccggc ggcggtttcg gtgctgactt
    13201 tgctgctgcc gacggcggga taaagtttgc cgtcaaaggc aataagcgtc tgcttcaatc
    13261 cgagtgggaa tgcggcaacg gcagtcgcca gattgcgcgg cgcgtcgctg cccacggcgt
    13321 tgtacggcca ttgggagccg gtcaggacga ttggcttgtc caaaccctgc agggcgaggg
    13381 cgaacagatt ggcggtatag gcgagcgtgt ccgtgccgtg cagcaccaaa acgccgtcgt
    13441 actgcggcag cgcggcggca atgatgtcca gccaagcgca ccagttttgc agttggacgg
    13501 cggaagaatc aatcagcgtc ccacaaacgt gccaatcgaa atccatgccg tttgaaaacg
    13561 gcgcgagtgc ctgcccgacc agcgcggtat cggggcgcag gccttcgctg ctttgcgtca
    13621 tgccgatggt gccgccggta taaaggacaa aaattttctg tttcatggct catcctgaaa
    13681 atgcaaagac cgcctgaaac gcgaaatgcg tccggacggt cgaaaatctg atttactgct
    13741 gcttctgtgc cgcttttttc gctgcctttt ccgccttgcg tttggcgcgt ttttcgctca
    13801 attgtgcgcg gtaaagctga taatgtcggc gtttgcgcca ccagaaccac gccagcgccg
    13861 ccgccagcac gcccaatgcg atgaagatgc cggattgcag gctgtgcatt ttcgccatca
    13921 gccaatcgat gttgtgcgcg ccgtactcgc ccaagtaaat ccaaacgggc acggaaatca
    13981 gcgcggcaag cccgtccata atcagaaagc gcagatacga tactttgcgg ctgatgccgg
    14041 cggtaacgaa aacggcagtc cgcaaacccg gcaggaagcg ggcgacaaac agaacccagt
    14101 tgccgtattt gtcgaatttt tcctgaacct gtgcgtaacg tttcggcgtc atgatgcgcg
    14161 caatcggttt gaacttgagg attttctgcc cccagatgcg tccggcggcg aacatgatgc
    14221 cgtccccgac caatacgccg agcataccga ctgcaaacat aatatgcgga ttggtataac
    14281 ccatacccga aatcacgccg cctgttacca aggtcaaatc ctcgggaatc ggcacgccga
    14341 aaccgcagat gaccaaaacg aaaaacacgg ccgcgtagcc gtattcgaca aaaaaggctt
    14401 ccaaaagggc aaacatagcg gatattccat tgtcggagat aaaaagtcag aacaagccga
    14461 aacattttct gcgcgaaacg gcattctatc aaagattatg ccgtctgaaa gcggcagggg
    14521 gcagattcgc gccctctgcc ggacgttcag acggcattta aacaggaaaa ccgccgctgt
    14581 tgaaacggtt ttgcctgatt ttgcctaaag gctgccgatg gcggaagcaa tacgttccgc
    14641 accgtcgcgc gcccaatccg cctgccgcgc ctccaccatc acgcgcacga cgggttcggt
    14701 tcccgaagcg cgcaacacga cacgcccttt gccttcgagt tctttttcca cttccgccaa
    14761 cacgtctttt gaggcttcct gccagttttg ccctttgccg atacggacat taatcatcgt
    14821 ttgcggatac ggctgccagt cggcgcaaac ggcggcaagg tcttggttca gcgtttgcaa
    14881 tgccgccaaa acctgcaagg cggaaataat gccgtcgccg gtgttgtgtt tgtccatgca
    14941 caaaatatgg ccgctggctt cgccgccgac gagccagccg cgttggttca gctgttccaa
    15001 cacatagcgg tcgccgactt tggcgcggca gaaatccacg ccctgctctt tcagggcgat
    15061 ttccatcgcc atattggtca tgaccgtgcc gaccacgccg ccgatgttga taccttctcg
    15121 ggcgcgggct ttagcaatga cgtaaatcag gctgtcgccg tcgtaaacct taccgttttt
    15181 atcgaccatc atcaggcggt cgccgtcgcc gtctaaggcg atgccgtagt cggcttcatg
    15241 ctgtaaaacg gcggcctgga gtgtcttggt ataagtcgca ccgcattttt cgttgatgtt
    15301 gtagccgttg ggttcgtcgc cgatgctgac gacctgtgca cccagttcgt gaaacacctt
    15361 gggtgcgaca ccgtaccccg cgccgttggc ggtatcgata accaacttca aaccacgaag
    15421 gtcggaatgg ctgggaaagg tggatttgca aaattcgata tagcggtcgt ccgcaccgct
    15481 gatacggcgt gcgcgcccga ggcgtgcaga aggctgggtt ttcatttctt cgtcgatttt
    15541 ggcttcgatt tccaactcga tttcatcgga aagcttcacg ccaccctcgg caaagaattt
    15601 gatgccgttg tcggaatagg cattatgcga cgcggaaatc atcacaccgg cggacaaacg
    15661 cagcgcacgg gtcagataag ccacgccggg cgtaggcagc ggaccggttt ggataacgtt
    15721 gacacctgcg gcggtaaaac ctgccaccaa agcggcttcc agcatataac cggaaatacg
    15781 cgtatccttg ccgattaaaa cggtcggttt ctggtcagtg tcgtgctgaa ccaaaacctg
    15841 ccccgccgca tagccgagtt tcaatacaaa atcgggcgta atcggaaact gcccgacttc
    15901 gccgcgcacg ccgtccgtgc cgaaatattt ttttgccatg tgttgctccg agaatgtgaa
    15961 ccgttgtccg agattataca gtctgtttgt gccctgctgt ctgcaccgtt gatgccgtct
    16021 gaagccgccc cgtccttttc agacggcatg aagtatgcga accgctgttt acagattgat
    16081 gcccaacgct tcccacacct tcaacgcgtc cgccgtcgcc ttcacgtcat gcacccgcac
    16141 aatttgcgcg ccgcgcgcca cagccgccac agccgccgcc acgctgccgt gtacgcgcgc
    16201 cgccgcgtct gcctcgccag tcagctcgcc tatcatacgt ttgcgcgaca cgccgatgag
    16261 cagcggaaaa cccgtttccg ccatcaattc gggtaaatgc cgcatcagtg cgatattgtg
    16321 ttgtaaggtt ttgccgaaac cgaaaccggg gtcgagtgtg atgcgttgcg gggcgatgcc
    16381 tgccgcgatg cattccgccg cccgcgcttt caaataccgc gccacttcac caacaacatc
    16441 ctgatatttc ggattaatct gcatggtttc aggcaaaccc tgcatatgca tcaggcaaat
    16501 acccgtgtcc gtctggcgcg ccagcaattc gaccgcgcct tcgtcggtca acgccgccac
    16561 atcgttaata atatcgatgc cgccgagtgc caacgctttt tccataacca ccgtgcggcg
    16621 cgtgtccaaa ctgacgggaa cgccccatcc cgcgacttct accaatacag gctcaacccg
    16681 cgcccattct tcttcggacg aaacataatc cgcacccggc cgcgtcgatt cgccgccaat
    16741 gtcgagaatg tccgcaccct ctttcaaaag ccgttcggcg tgcgccaaag cggttttggc
    16801 attttgcgaa tacgcgccgc cgtcggaaaa agaatcaggc gtgagattca cgatgcccat
    16861 aattttcggc ttgtccaaac cgatttcaaa ccgtcctgcc tgccaaccgt gtcgtgccat
    16921 ctgaactcct cccaaaataa aaaaac
//
LOCUS       DAWITQ010000026        16938 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.026, whole genome shotgun sequence.
ACCESSION   DAWITQ010000026 DAWITQ010000000
VERSION     DAWITQ010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16938)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16938)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16938
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.026"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(50..1219)
                     /locus_tag="WIX18_000727"
     CDS             complement(50..1219)
                     /locus_tag="WIX18_000727"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEZ5237870.1"
                     /translation="MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAET
                     LVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPD
                     IAQGVNEGEGIDLNQGAGDQGLMFGYACDETPTLMPFAIYYSHRLMQRQSELRKDGRL
                     PWLRPDAKAQLTVVYDSETGKVKRIDTVVLSTQHDPSIAYEELKNAVIEQIIKPVLPS
                     ELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVD
                     RSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLITLV
                     REHFDLRPKGIVQMLDLLRPIYSKSAAYGHFGREEPEFTWERTDKAAALRAAAGL"
     regulatory      complement(1402..1512)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01725"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitches modulate the expression of
                     downstream genes in response to levels of
                     S-adenosylmethionine; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF01725"
     gene            1565..2461
                     /locus_tag="WIX18_000728"
     CDS             1565..2461
                     /locus_tag="WIX18_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEZ5237871.1"
                     /translation="MFRLQFGLFPPLRTAMHILLTALLKCLSLLPLSCLHTLGNRLGH
                     LAFYLLKEDRARIVANMRQAGMNPDPKTVKAVFAETAKGGLELAPAFFRKPEDIETMF
                     KAVHGWEHVQQALDKHEGLLFITPHIGSYDLGGRYISQQLPFPLTAMYKPPKIKAIDK
                     IMQAGRVRGKGKTAPTSIQGVKQIIKALRSGEATIVLPDHVPSPQEGGEGVWVDFFGK
                     PAYTMTLAAKLAHVKGVKTLFFCCERLPGGQGFDLHIRPVQGELNGDKAHDAAVFNRN
                     AEYWIRRFPTQYLFMYNRYKMP"
     gene            complement(2505..3569)
                     /gene="tsaD"
                     /locus_tag="WIX18_000729"
     CDS             complement(2505..3569)
                     /gene="tsaD"
                     /locus_tag="WIX18_000729"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HEZ5237872.1"
                     /translation="MLVLGIESSCDETGVALYDTERGLRAHCLHTQMAMHAEYGGVVP
                     ELASRDHIRRLVPLTEGCLAQAGASYGDIDAVAFTQGPGLGGALLAGSSYANALALAL
                     DKPVIPVHHLEGHLLSPLLAEEKPDFPFVALLVSGGHTQIMAVRGIGDYALLGESVDD
                     AAGEAFDKTAKLLGLPYPGGAKLSELAESGRPEAFVFPRPMIHSDDLQMSFSGLKTAV
                     LTAVEKVREANGSETIPEQTRNDICRAFQDAVVDVLAAKVKKALLQTGFRTVVVAGGV
                     GANRKLRETFGNMTVQIPTPKGKPKHPSEKVSVFFPPTAYCTDNGAMIAFAGAMHLGK
                     GREVGAFNVRPRWPLSEIVR"
     gene            complement(3686..4873)
                     /gene="ccsB"
                     /locus_tag="WIX18_000730"
     CDS             complement(3686..4873)
                     /gene="ccsB"
                     /locus_tag="WIX18_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcsB"
                     /protein_id="HEZ5237873.1"
                     /translation="MTEHYKTLPEHELLIQKSLISNLNLWDWVFAVLVFAATVFVQTR
                     SGMHMDIYETVMLWASAGIAVFLGWFFKPMRWFVPLSVLLAYAAVGLYGGNIKSAEIF
                     LLRYFLSSQSAIMWQCAFVFFALFAYISGAVLASVKNVPTNTLLGMGTVFAWVSAVAG
                     FTGLLVRWHESYLLRPDAGHIPVSNLYEVFILFLVITALMYLYYEGKFAIQKLGGFVF
                     GFMAVVVGFVLWYSVSREAHTIQPLIPALQSWWMKIHVPANFIGYGAFCISAMLGIAE
                     LVSLRAEGKGGKLWLPPSALIDEVMYKAIAVGFLFFTIATILGALWAADAWGRYWSWD
                     PKETWAFIVWLNYAVWLHLRLVAGWRGKVLAWWAIIGLFVTAFAFIGVNMFLSGLHSY
                     GTL"
     gene            complement(4866..6818)
                     /locus_tag="WIX18_000731"
     CDS             complement(4866..6818)
                     /locus_tag="WIX18_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein"
                     /protein_id="HEZ5237874.1"
                     /translation="MRFAVALLSLLGIASVIGTVLQQNQPQTDYLVKFGSFWAQIFGF
                     LGLYDVYASAWFVVIMMFLVVSTSLCLIRNVPPFWREMKSFREKVKEKSLAAMRHSSL
                     LDVKIAPEVAKRYLEVQGFQGKTINREDGSVLIAAKKGTMNKWGYIFAHVALIVICLG
                     GLIDSNLLLKLGMLTGRIVPDNQAVYAKDFKPESILGASNLSFRGNVNISEGQSADVV
                     FLNADNGILVQDLPFEVKLKKFHIDFYNTGMPRDFASDIEVTDKATGEKLERTIRVNH
                     PLTLHGITIYQASFADGGSDLTFKAWNLGDASREPVVLKATSIHQFPLEIGKHKYRLE
                     FDQFTSMNVEDMSEGAEREKSLKSTLNDVRAVTQEGKKYTNIGPSIVYRIRDAAGQAV
                     EYKNYMLPVLQEQDYFWITGTRSGLQQQYRWLRIPLDKQLKADTFMALREFLKDGKGR
                     KRLVADATKDAPAEIREQFMLAAENTLNIFAQKGYLGLDEFITSNIPKEQQDKMQGYF
                     YEMLYGVMNAALDETIRRYGLPEWQQDEARNRFLLHSMDAYTGLTEYPAPMLLQLDGF
                     SEVRSSGLQMTRSPGALLVYLGSVLLVLGTVLMFYVREKRAWVLFSDGKIRFAMSSAR
                     SERDLQKEFPKHVESLQRLGKDLNHD"
     gene            complement(7095..7718)
                     /locus_tag="WIX18_000732"
     CDS             complement(7095..7718)
                     /locus_tag="WIX18_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c4"
                     /protein_id="HEZ5237875.1"
                     /translation="MKRLTLLAFVLAAGAVSASPKADVEKGKQVAATVCAACHAADGN
                     SGIAMYPRLAAQHTAYIYHQTIGIRDGKRTHGSAAVMKPVVMNLSDQDILNVSAFYAK
                     QQPKSGEANPKENPELGAKIYRGGLSDKKVPACMSCHGPSGAGMPGGGSEIQAYPRLG
                     GQHQAYIVEQMNAYKSGQRKNTIMEDIANRMSEEDLKAVANFIQGLR"
     gene            7924..8553
                     /locus_tag="WIX18_000733"
     CDS             7924..8553
                     /locus_tag="WIX18_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HEZ5237876.1"
                     /translation="MNLFQNAKFFTTVNHLKDLPDTPLEIAFVGRSNAGKSSAINTLT
                     NHVRLAYVSKTPGRTQHINFFELQNGNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQ
                     RKQLIGLVLIMDARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVK
                     KLLKPYSDRQNISVQLFSSLKKQGIDEANRTVGSWFDAADAAASSPEEN"
     gene            complement(8674..11070)
                     /locus_tag="WIX18_000734"
     CDS             complement(8674..11070)
                     /locus_tag="WIX18_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HEZ5237877.1"
                     /translation="MIKKILTTCFGLVFGFCVFGVGLVAIAILVTYPKLPSLDSLQHY
                     QPKMPLTIYSADGEVIGMYGEQRREFTKIGDFPEVLRNAVIAAEDKRFYRHWGVDVWG
                     VARAAVGNVVSGSVQSGASTITQQVAKNFYLSSEKTFTRKFNEVLLAYKIEQSLSKDK
                     ILELYFNQIYLGQRAYGFASAAQIYFNKNVRDLTLAEAAMLAGLPKAPSAYNPIVNPE
                     RAKLRQKYILNNMLEEKMITVQQRDQALNEELHYERFVRKIDQSALYVAEMVRQELYE
                     KYGEDAYTQGFKVYTTVRADHQKVATEALRKALRNFDRGSSYRGAENYIDLSKSEDVE
                     ETVSQYLSGLYTVDKMVPAVVLDVTKKKNVVIQLPGGRRVTLDRRALGFAARAVNNEK
                     MGEDRIRRGAVIRVKNNGGRWAVVQEPLLQGALVSLDAKTGAVRALVGGYDFHSKTFN
                     RAVQAMRQPGSTFKPFVYSAALSKGMTASTVVNDAPISLPGKGPNGSVWTPKNSDGRY
                     SGYITLRQALTASKNMVSIRILMSIGVGYAQQYIRRFGFRSSELPASLSMALGTGETT
                     PLKVAEAYSVFANGGYRVSSHVIDKIYDRDGRLRAQMQPLVAGQNAPQAIDPRNAYIM
                     YKIMQDVVRVGTARGAAALGRTDIAGKTGTTNDNKDAWFVGFNPDVVTAVYIGFDKPK
                     SMGRVGYGGTIAVPVWVDYMRFALKGKQGKGMKMPEGVVSSNGEYYMKERMVTDPGLT
                     LDNSGIAPQPSRRAKEDDGGAAEGGRQAADDEVRQDMQETPVLPSNTGSKQQQLDSLF
                     "
     gene            11222..12337
                     /locus_tag="WIX18_000735"
     CDS             11222..12337
                     /locus_tag="WIX18_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilM"
                     /protein_id="HEZ5237878.1"
                     /translation="MRLFKSLKNPKKTDAKLPKKSSGLNNRAAIGIDIDQHSIKMVQL
                     SGRSLNQIQLEKYVIAKLPKNIIQGNKVQNYDQLVTYLQQAYAKLGTSCKNIIASVPQ
                     NLATIEQLTYTDKDAELDLQGFVESSISEVSSISLEEANYDYQVLSQSAAGEAVLAVA
                     SRKDEIEPLIDAFNAAGMKLSALDVDIFGQYNAYALWINHFAPELAAEKVAIFGVYAA
                     QTYALVIQDGKILYKQETSVSEEQLNQLIQRTYQVTEEKAEEIINSPQKPSDYQESVA
                     NYFNQQITQEIQRVLQFYYTTQTADDMTDIKHILLTGEAARQEGIAQTVASQTNADVQ
                     CVHPARYFADNLKTDKQQFELDAPTLTRAFGLAVRGL"
     gene            12340..12939
                     /locus_tag="WIX18_000736"
     CDS             12340..12939
                     /locus_tag="WIX18_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HEZ5237879.1"
                     /translation="MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYL
                     FIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQEKDAFLIKKNKVEELQLKRLQAA
                     KILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
                     SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN"
     gene            12940..13587
                     /locus_tag="WIX18_000737"
     CDS             12940..13587
                     /locus_tag="WIX18_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HEZ5237880.1"
                     /translation="MASKSSKTNLDLNNLHLLNLPARLFIALLAVAAVLGLGYAGLFK
                     SQMESLEEYEAKETELKNTYKQKSIDAASLNNLRDELASIRSAFDIMLKQLPTDAEIP
                     NLVQELHQAGSSNGLRLDSVMPQPPVDDGPIKRLPYSISITGNYEQISQFTRDVGSLS
                     RIITLESLKIAQSPENGGNPDGKSSILNLSAIATTYQAKSVEELAAEAAQNAEQK"
     gene            13605..14150
                     /locus_tag="WIX18_000738"
     CDS             13605..14150
                     /locus_tag="WIX18_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilP"
                     /protein_id="HEZ5237881.1"
                     /translation="MKHYALLISFLALSACSQGSEDLNEWMAQTRREAKAEIIPFQAP
                     TLPVAPVYSPPQLTGPNAFDFRRMETDKKGENAPDTKRIKETLEKFSLENMRYVGILK
                     SGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIVLNELIEDSTGNWVSRKAE
                     LLLNSSDKNTEQAAAPAAEQN"
     gene            14169..16430
                     /locus_tag="WIX18_000739"
     CDS             14169..16430
                     /locus_tag="WIX18_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HEZ5237882.1"
                     /translation="MNTKLTKIISGLFVATAAFQTASAGNITDIKVSSLPNKQKIVKV
                     SFDKEIVNPTGFVTSSPARIALDFEQTGISMDQQVLEYADPLLSKISAAQNSSRARLV
                     LNLNKPGQYNTEVRGNKVWIFINESDDTVSAPARPAVKAAPAAPAKQQAAAPSTKSAV
                     SVSKPFTPAKQQAAAPFTESVVSVSAPFSPAKQQAAAPAKQQAAAPAKQTNIDFRKDG
                     KNAGIIELAALGFAGQPDISQQHDHIIVTLKNHTLPTTLQRSLDVADFKTPVQKVTLK
                     RLNNDTQLIITTAGNWELVNKSAAPGYFTFQVLPKKQNLESGGVNNAPKTFTGRKISL
                     DFQDVEIRTILQILAKESGMNIVASDSVNGKMTLSLKDVPWDQALDLVMQARNLDMRQ
                     QGNIVNIAPRDELLAKDKAFLQAEKDIADLGALYSQNFQLKYKNVEEFRSILRLDNAD
                     TTGNRNTLVSGRGSVLIDPATNTLIVTDTRSVIEKFRKLIDELDVPAQQVMIEARIVE
                     AADGFSRDLGVKFGATGKKKLKNDTSAFGWGVNSGFGGDDKWGAETKINLPITAAANS
                     ISLVRAISSGALNLELSASESLSKTKTLANPRVLTQNRKEAKIESGYEIPFTVTSIAN
                     GGSSTNTELKKAVLGLTVTPNITPDGQIIMTVKINKDSPAQCASGNQTILCISTKNLN
                     TQAMVENGGTLIVGGIYEEDNGNTLTKVPLLGDIPVIGNLFKTRGKKTDRRELLIFIT
                     PRIMGTAGNSLRY"
BASE COUNT         4559 a         4807 c         3870 g         3702 t
ORIGIN      
        1 aaatgccgtc tgaactgttc agacggcatt tttgattttc aaaccggaat tacagccccg
       61 ctgccgccct caatgcagca gctttgtcgg tgcgctccca agtgaactca ggttcttcgc
      121 ggccgaaatg tccgtaagcg gcggatttac tgtaaatcgg gcgcaagaga tcgagcattt
      181 ggacgatgcc tttggggcgc aggtcgaaat gttcgcgaac taaggtaatc agtttttcct
      241 cgctgatttt gcctgtgccg aaagtgtcga tggaaatcga agtcggttcg gcaacgccga
      301 tggcgtagga aacttggatt tggcattggg ttgccaatcc tgcggcgacg atgtttttcg
      361 ccacatagcg gcaggcgtag gcggcggaac ggtcaacctt ggacgggtct ttgccggaaa
      421 acgcgccgcc gccgtgcgga gccgcgccgc cgtaggtatc gacgatgatt ttacggccgg
      481 tcaaaccgca gtcgccttgc gggccgccga tgacgaagcg gccggtcggg ttgatcaggt
      541 atttggtttc gtcggtcagc agttcagacg gcaggacggg cttgataatc tgctcgatga
      601 cggcgttttt cagttcttcg taagcgatgg acggatcgtg ctgggtagag aggacgacgg
      661 tatcaatgcg ttttacctta ccggtttcgc tgtcgtaaac cacggtcaac tgcgcttttg
      721 cgtcgggacg cagccacggc aggcggccgt ctttacgcaa ttcgctttgg cgttgcatca
      781 ggcggtggct gtaatagatg gcaaacggca tcagggtcgg ggtttcgtcg caggcataac
      841 cgaacatcaa accttggtcg cctgcgcctt ggttcaagtc gataccttcg ccttcgttta
      901 cgccttgggc gatgtcgggg gattgttggt cgtagtacac gccgaccgcg cagccgttgg
      961 catcaaagcc cagctcggag gagttgtagc cgatgcgttt gatggtttcg cgtgcgactt
     1021 tgatgtagtc cacttgggcg gtggtggtga tttcgcctgc caatacgcac aagcctgtgt
     1081 tgaccaaagt ttctgcggcg acacgcgctt tggggtcttg cgccaagatg gcatccaaaa
     1141 tcgcatcgga tacttggtcg gcaactttgt ccggatggcc ttcggatacc gattcggaag
     1201 taaacagata ttcgctcatt gagattttcc ttgaaaaaca aaccatcttc ttcagacggc
     1261 atgttgtatg aacataatgt cgacagcggg aaatatagca aaatttccct attcatacca
     1321 ttcagttgag aaatattccc atttgaatgg cactttggaa tctctgcccg tacgtttctt
     1381 acaggcaaaa aaattcccgc atcaagcggg tttggattgc tctggtgagc cacatcggct
     1441 tttcaaccgt ccaccttact tttccttttg aaaagcaggt tggcatggaa ttcccaactc
     1501 ttaatgcagc gcggatggta gcagaaaagc ctttccgccg caatacttcc ctttttcaga
     1561 cggcatgttt cgtttacaat tcgggctgtt tccccctttg cgaaccgcca tgcacatcct
     1621 gttgaccgcc ctgctcaaat gcctctccct gctgccactt tcctgtctgc acacgctggg
     1681 aaaccggctc ggacatctgg cgttttacct tttaaaggaa gaccgcgcgc gcatcgtcgc
     1741 caatatgcgt caggcaggca tgaatcccga ccccaaaaca gtcaaagccg tttttgcgga
     1801 aacggcaaaa ggcggtttgg aacttgcccc cgcgtttttc agaaaaccgg aagacataga
     1861 aacaatgttc aaagcggtac acggctggga acatgtgcag caggctttgg acaaacacga
     1921 agggctgcta ttcatcacgc cgcacatcgg cagctacgat ttgggcggac gctacatcag
     1981 ccagcagctt ccgttcccgc tgaccgccat gtacaaaccg ccgaaaatca aagcgataga
     2041 caaaatcatg caggcgggca gggttcgcgg caaaggaaaa accgcgccta ccagcataca
     2101 aggggtcaaa caaatcatca aagccctgcg ttcgggcgaa gcaaccatcg tcctgcccga
     2161 ccacgtcccc tcccctcaag aaggcgggga aggcgtatgg gtggatttct tcggcaaacc
     2221 tgcctatacc atgacgctgg cggcaaaatt ggcacacgtc aaaggcgtga aaaccctgtt
     2281 tttctgctgc gaacgcctgc ctggcggaca aggtttcgat ttgcacatcc gccccgtcca
     2341 aggggaattg aacggcgaca aagcccatga tgccgccgtg ttcaaccgca atgccgaata
     2401 ttggatacgc cgttttccga cgcagtatct gtttatgtac aaccgctaca aaatgccgta
     2461 acgaaaataa aaatgccgtc tgaacaattt cagacggcat tttgtcatct gacgatttcc
     2521 gacagcggcc agcgcggacg gacattgaac gcaccgacct ccctgccctt gcccaggtgc
     2581 atcgcaccgg caaaggcaat catggcaccg ttgtccgtgc agtatgccgt cggcgggaaa
     2641 aacacgctga ctttttcgga cggatgtttc ggcttgcctt ttggggtcgg gatttgcacc
     2701 gtcatattgc cgaaagtttc acggagtttg cggtttgcac cgaccccgcc ggcgaccact
     2761 acggttctga accctgtctg caacagggct tttttcactt tcgccgccaa cacatcgact
     2821 accgcatctt gaaacgcacg gcaaatatcg ttgcgggttt gctcgggaat ggtttccgaa
     2881 ccgtttgcct cacgcacttt ttcaacggca gtcaaaacag cggttttcaa acctgaaaaa
     2941 ctcatctgca aatcgtcgga atgaatcatc gggcgcggaa aaacaaacgc ttcgggcctg
     3001 cccgattccg caagttccga cagtttcgca ccgcccggat acggcaagcc cagcagtttc
     3061 gccgttttgt cgaatgcctc gcccgccgca tcatcgacgc tctcgcccaa aagcgcgtag
     3121 tcgcctatgc ccctgaccgc cataatctgc gtatgcccgc ccgaaaccag cagcgcgaca
     3181 aaaggaaagt cgggtttttc ctccgccaac agcggcgaca gcagatgtcc ttccaaatga
     3241 tggacgggaa taacaggctt gtccaacgct aaagccagcg cgttggcgta gctcgaaccc
     3301 gccagcagcg caccgcccaa accgggcccc tgcgtaaagg caaccgcgtc aatgtcgcca
     3361 tacgatgcgc ccgcctgcgc caaacagcct tcagtcaacg gaacaaggcg gcggatatgg
     3421 tcgcggcttg ccaattccgg cacaaccccg ccgtattcgg cgtgcattgc catttgagtg
     3481 tgcaggcagt gcgcccgcaa tccacgttcc gtatcgtaaa gcgcaacacc tgtttcgtcg
     3541 caagaagact cgattcctaa taccaacatg gtctgatgcc gttaaaaact gaaaaacgta
     3601 ttttagcgga tttcggcacg actgccgtat cccaaaaacg gaacatgccg tctgaagacc
     3661 gttcagacgg catcgtcgca ccgtatcaaa gcgttccgta agaatgcagc ccgctcaaaa
     3721 acatattcac gccgataaag gcaaatgcgg ttacgaacaa accgataatc gcccaccacg
     3781 ccagcacttt gccgcgccaa ccggcaacca gccgcaagtg cagccaaacg gcgtaattga
     3841 gccagacgat gaacgcccac gtctctttcg gatcccaact ccaatagcgt ccccaagcat
     3901 ctgccgccca cagcgcaccc aaaatggtgg caatagtaaa gaacagaaag ccgacggcaa
     3961 tcgccttata catcacctcg tcgatcaatg ccgacggcgg cagccacagt tttccgcctt
     4021 ttccttccgc acgcagggaa accagttcgg caataccgag catcgcggaa atgcaaaacg
     4081 cgccgtaacc gataaagttt gccggaacgt ggattttcat ccaccaggac tggagcgcgg
     4141 gaatcagcgg ctggatggta tgcgcctcgc gggacacgct gtaccacaag acaaatccaa
     4201 ccacgaccgc cataaagccg aacacgaagc cgcccaattt ctgtatggcg aacttacctt
     4261 cataataaag atacatcagc gcggtaatca ccaaaaacag gatgaacact tcatacaggt
     4321 tggaaaccgg aatatgcccc gcatcgggac ggagcagata gctttcgtgc caacgtacca
     4381 gcagaccggt aaagcctgct acggcagaca cccatgcaaa cacggttccc atacccaaca
     4441 gcgtgttggt cggcacattt tttacgcttg ccaaaaccgc gcccgaaata taagcgaaca
     4501 gggcgaaaaa gacaaaggcg cactgccaca tgatcgccga ttggctgctg aggaaatacc
     4561 gcaacaggaa aatctctgcc gatttgatgt tgccgccata cagaccgacg gcggcatagg
     4621 caagcaatac gcttaaagga acaaaccagc gcatcggttt gaaaaaccaa cccaaaaaca
     4681 cggcaatacc ggcactcgcc cacaacatga ccgtttcgta aatgtccata tgcataccgg
     4741 aacgggtctg tacgaaaacc gtagccgcaa aaaccagcac ggcaaatacc caatcccaaa
     4801 gattcagatt gctgatcaaa gacttctgaa tcagcagctc gtgttccgga agggttttat
     4861 agtgttcagt catgattcaa gtccttgccg agccgttgca gactctcgac gtgttttgga
     4921 aattccttct gcaaatcccg ttcactgcgg gccgaagaca tggcaaaacg gattttgccg
     4981 tctgaaaaca atacccacgc ccgtttttcg cgcacataaa acatcaatac cgtacccaat
     5041 accaacagca ccgagccgag atagaccaaa agcgcacccg gggaacgggt catctgcaaa
     5101 cccgacgaac gcacctcgga aaacccatca agttgcagca gcataggcgc gggatattcg
     5161 gtcaaacccg tgtacgcatc catactgtgc agcaggaaac ggttccgcgc ttcatcctgc
     5221 tgccattcgg gcaagccgta ccggcgtatg gtttcatcca aagcagcgtt catcacgccg
     5281 taaagcattt cgtagaaata gccctgcatc ttatcctgct gctctttcgg gatattggac
     5341 gtaataaatt cgtccaatcc caaatagcct ttttgtgcaa agatgttcag cgtgttttcc
     5401 gcagccagca tgaattgttc gcggatttcg gcaggtgcgt ctttggttgc gtcggcaacc
     5461 agacgtttgc gccccttccc gtctttcaga aactcgcgca acgccataaa ggtgtccgct
     5521 ttcaactgct tgtccaaggg gatacgcagc cagcggtatt gctgctgcaa gccgctgcgc
     5581 gtgccggtaa tccaaaaata atcctgttcc tgcaaaaccg gcagcatata gtttttatat
     5641 tcgaccgcct gccctgccgc atcacggata cggtaaacaa tggaagggcc gatattggtg
     5701 tattttttac cttcctgagt aacggcgcgg acatcgttca gcgtggattt caggcttttt
     5761 tcccgttccg cgccctcgct catgtcctcc acattcatag aagtgaactg atcgaactca
     5821 agacgatatt tgtgtttgcc aatttccaac ggaaactggt gtatggatgt tgccttcaac
     5881 acgacaggct cgcgcgaagc atcacccaaa ttccacgcct tgaatgtcaa atccgaaccg
     5941 ccgtcggcaa aactcgcctg ataaatcgtg atgccgtgca aggtcaaagg atggttcacg
     6001 cggatggtgc gctcgagttt ctcaccggtt gccttgtccg tcacttcaat atcactggca
     6061 aaatcgcgcg gcataccggt attgtaaaag tcgatatgaa attttttcag tttgacttca
     6121 aaaggcaagt cctgaaccaa tatcccgttg tcggcattca ggaaaaccac atccgcactc
     6181 tgcccctcgg aaatattgac gttgccccta aatgagagat tggacgcacc caaaatactt
     6241 tcgggcttga aatccttggc ataaaccgcc tgattgtccg gaacaatccg accggtcagc
     6301 atacccagtt tcaacagcag gttactgtct atcaacccgc ccaggcaaat gacaatcaaa
     6361 gcaacatggg caaagatata gccccatttg ttcattgtgc cttttttggc ggcaatcaga
     6421 accgacccgt cttcacggtt aatggttttt ccctgaaaac cttgtacttc cagataacgt
     6481 ttggcaacct cgggcgcaat ttttacatcc aacagcgaag aatggcgcat cgccgccaga
     6541 gatttttctt taaccttttc ccgaaaagac ttcatttcgc gccagaacgg cggcacattg
     6601 cgaatcaggc acaaactggt agaaaccacc aaaaacatca tgataacgac aaaccatgcc
     6661 gaagcataga cgtcatacag tcccagaaaa ccaaaaatct gcgcccaaaa cgatccgaat
     6721 ttgaccaaat aatccgtctg cggctggttt tgctgcaaca ccgtaccgat aaccgatgca
     6781 atacccagca gactgagcaa agcgactgca aagcgcatgg agctgaaaaa agcgaaccac
     6841 ggacgggaaa gaagtggggg agatctacgg gatttactca ttgtgtgttt attccgccat
     6901 caggaatatg ggaaagcaga attgggcaaa cagaaaacaa cgtcccgatt ctactgtctt
     6961 gatgcttttt atttcaagac aatgaagaca gcctgcatcg attccaacgg ttgcgattga
     7021 aaaaacttat cgcagaattg cctgaagccg tctgaaaact tttcagacgg cctctaaaac
     7081 agactattgc ggaattaacg caaaccttgg ataaagttgg cgaccgcttt caaatcttct
     7141 tcagacatac ggtttgcaat atcttccatg atggtatttt tacgctgacc ggacttgtag
     7201 gcattcatct gttcaacaat atatgcctga tgctgaccgc ccaaacgcgg ataagcctga
     7261 atttcgcttc cgcctcccgg catacccgca ccgctcggac cgtggcagga catacacgcc
     7321 ggcacttttt tatcgctcaa accgccgcga tagattttcg cacccaattc gggattttcc
     7381 ttaggattgg cttcaccgga tttgggctgc tgtttggcat agaatgcgga tacgttcaaa
     7441 atatcctgat cgctcaaatt cattaccacc ggtttcatca cagctgccga accgtgggtg
     7501 cgtttaccgt cgcggatgcc gatagtttga tgatagatgt aagcagtatg ctgtgccgcc
     7561 aaacgcggat acatcgcaat gccgctgtta ccgtctgctg catggcaagc cgcacaaacc
     7621 gttgcggcaa cctgtttgcc tttttccacg tctgctttgg gagaggcgga aaccgcaccg
     7681 gcagccaaaa caaaggccaa taaagtcaat cgtttcatgg agtgctcctg attacagcat
     7741 tggataacgc aacaatgctc tttttatatt caaatacggg atttttgacc cgattaaaac
     7801 cgatgattct gtaaacgtgt tattctatac taaatttaca ttaaattacc actgtgtttc
     7861 acataaaacc aaccgcatat ttttgctgtc ggacaaacgg cggcggaaaa caaggatatg
     7921 cccatgaacc tttttcaaaa cgccaaattc ttcacgacgg tcaaccacct taaagacctg
     7981 cccgacaccc ctctcgaaat tgcctttgtc ggcaggagca atgccggaaa atccagtgcc
     8041 atcaataccc tgaccaacca tgtccgtctt gcctacgttt caaaaacacc cggacggacg
     8101 cagcatatca acttcttcga gctgcagaac ggcaatttta tggtcgattt gcccggctac
     8161 ggttatgccc aagtccccga agcagtacgc gcacattggg tcaatctgct cggcgactat
     8221 ctgcaacagc gcaaacagct tatcgggctg gttttgatta tggatgcccg ccatccttta
     8281 aaagaactcg acatccgtat gctggacttt ttccacacga ccggcagacc ggttcacatc
     8341 ctgctgtcaa aagccgacaa attatccaaa aacgaacaga taaaaaccct gtcccaagtc
     8401 aaaaaactgc tcaaacctta ttccgacagg caaaacatca gcgtacagct gttttccagc
     8461 ctgaaaaaac aaggtattga cgaggccaac cgaactgtcg gaagctggtt tgacgcagca
     8521 gatgccgccg cttcctctcc agaggaaaac tgaccccaat tatacggaaa ccgtatttcc
     8581 cccacttgac cgaccgcaaa catttaaaaa attgccactg ccaaatctaa aatgccgtct
     8641 gaaagacttt tcagacggca ttttgcggag tctttaaaac agagaatcca actgctgctg
     8701 tttggaacca gtattactcg gaagcaccgg cgtttcctgc atatcttggc ggacttcgtc
     8761 atccgccgcc tgccgtccgc cttctgccgc gcccccgtca tcttcttttg cccgtcggga
     8821 aggttgcggc gcaataccgc tgttgtccag cgtcaagccc ggatcggtta ccatacgttc
     8881 cttcatatag tattcgccat tgctgctgac cacaccttca ggcattttca tccccttgcc
     8941 ctgctttcct ttcaacgcaa aacgcatata gtccacccaa accggcaccg caatcgtacc
     9001 gccgtagccg acacgcccca tactcttagg tttgtcgaag ccgatatata cggcagtaac
     9061 cacatcaggg ttaaaaccga caaaccacgc atccttattg tcattggtcg tacccgtttt
     9121 accggcaata tccgttcttc ccaacgcagc tgcccccctt gccgtaccaa cacggaccac
     9181 atcctgcata atcttataca taatataggc attgcgcgga tcgattgcct gaggcgcatt
     9241 ttgcccggcc accaaaggtt gcatttgggc gcgcaacctg ccgtctctgt cataaatctt
     9301 atcgattacg tgcgaagaaa ccctatatcc gccgttcgca aatacgctat atgcctccgc
     9361 cactttcaac ggcgttgtct cgcccgtacc taaagccata gacaggcttg ccggcagctc
     9421 ggacgacctg aagccgaaac gccggatata ctgttgcgcg taaccgacac cgatagacat
     9481 caaaatacgg atggaaacca tattcttgga agccgtcaga gcctgtctca aagtaatgta
     9541 gccggaatat ctgccgtctg aatttttagg tgtccaaacc gaaccgttcg gccctttccc
     9601 cggcagggaa atcggcgcat cgttaaccac tgtggacgcg gtcatcccct tagataatgc
     9661 cgccgaatag acaaacggct taaaggtcga acccggctgc cgcattgcct gaacggcacg
     9721 attgaatgtt ttgctgtgaa aatcataacc gccgaccagc gcgcgcacag ctccggtttt
     9781 tgcatccagc gaaaccaaag ccccctgcag caacggctct tgaaccaccg cccaacgccc
     9841 gccgttgttt ttgacacgga tgaccgcgcc cctgcggata cggtcctccc ccattttttc
     9901 attattgacc gcgcgggccg caaaacccaa ggcgcgcctg tcaagcgtaa cccgcctgcc
     9961 gccgggcagc tgtatgacga catttttctt tttagtcaca tccaacacaa cggcgggaac
    10021 cattttatcg acggtataga gtcccgacag atactggctg acagtctcct cgacatcttc
    10081 actcttactc aaatcgatat agttttccgc accgcggtag ctgctgccgc gatcgaaatt
    10141 ccgtagagcc ttgcgcaatg cctcggttgc caccttctga tgatcggcgc ggaccgtggt
    10201 ataaacctta aaaccctgcg tataggcatc ttcaccgtat ttctcataca gttcctgacg
    10261 caccatttcc gccacatata aagcactctg atcgattttc cgaacaaacc gctcgtaatg
    10321 cagttcctca ttcaacgcct gatcgcgctg ttgcacggta atcatcttct cctcgagcat
    10381 attgttcaaa atatacttct ggcgcaactt ggcacgttcc ggattaacaa tcggattata
    10441 ggcagacgga gccttgggca gtcccgcaag catggcggct tccgccaaag tcaaatctcg
    10501 gacattctta ttgaaataga tttgcgcggc agatgcaaaa ccataggcgc gctgaccgag
    10561 gtaaatctga ttgaaataca actcgaggat tttgtctttg cttaaagact gctcgatttt
    10621 ataggcaagc aacacctcat tgaatttgcg tgtgaacgtt ttttcactgc tcaaataaaa
    10681 atttttcgcc acctgctgcg taatcgtact cgcacccgac tgcacgctgc cggacacgac
    10741 attgccgacg gcagcgcggg caacacccca aacatccacc ccccaatgcc ggtaaaagcg
    10801 tttatcctcg gcggcgataa ccgcattccg caacacctct gggaaatcgc cgatttttgt
    10861 aaattcgcgc cgctgctccc catacatacc gatgacttcc ccatccgccg aataaatagt
    10921 caacggcatt ttaggctggt aatgctgcaa agaatccaaa gacggtagtt tcggatacgt
    10981 taccaaaata gcaatggcaa ccaaacccac tccaaataca caaaacccaa aaaccaaacc
    11041 aaaacaagtc gttaaaatct ttttaatcat agctgaataa taatttacca ttattggtat
    11101 taaataaagt aaaatagcaa ccgatttcta caaagcacgg tttcaatgtg caaagaacaa
    11161 ggaatccatt acggataccg aaacggttac tcactgtaca aataaagcag gaactttcat
    11221 catgcgcttg tttaaaagct tgaaaaaccc taaaaaaaca gatgccaagc tccctaaaaa
    11281 atcttcggga ctcaataacc gcgcggcaat cggcatcgat atcgaccagc attccatcaa
    11341 aatggtccaa ttgtcaggac gtagtttaaa ccaaattcaa ttggaaaaat acgtcattgc
    11401 caaattacca aagaatatca ttcaaggcaa taaagtccaa aattacgatc aacttgttac
    11461 atatttgcaa caagcctatg ccaaactggg tacttcgtgc aaaaacatca tcgcgtccgt
    11521 cccgcaaaat ctggcaacca tcgaacaatt gacctacaca gacaaagatg cagaattaga
    11581 cctgcagggg ttcgtggagt cctccatctc cgaagtcagc tcgatatcgc tcgaagaagc
    11641 caattacgac tatcaggtct tgtcccaatc ggccgccggc gaagctgtgt tggccgtcgc
    11701 atcgagaaag gatgaaatcg aacccctgat tgacgcattc aacgccgccg gtatgaaatt
    11761 atccgcgctt gatgtggaca ttttcggaca atacaacgcc tacgcgctat ggataaacca
    11821 tttcgccccc gagcttgcag ccgaaaaagt cgccattttc ggcgtatatg ccgcacagac
    11881 ctacgccttg gtcatccaag acggaaaaat cctatacaaa caggaaacct ccgtcagcga
    11941 agaacagctc aaccaactca tccagcgcac ctatcaggta acagaagaaa aagcggaaga
    12001 aatcatcaac tccccgcaaa aaccttccga ttaccaagaa agcgtggcaa actatttcaa
    12061 ccagcagatt acccaagaaa tacaaagggt cttgcagttt tattacacca cgcagaccgc
    12121 agacgatatg accgacatca agcatatcct gctgaccggg gaagcggcgc gccaggaagg
    12181 tatcgcccaa accgtcgcct cacaaaccaa tgcagatgta caatgcgtcc atcccgcgcg
    12241 ttattttgcg gacaacctca aaacagacaa acaacaattc gaacttgatg cgccgacact
    12301 gaccagggcg ttcggtttgg cggtacgggg attataatta tgaacaattt aatcaaaatc
    12361 aacctcctcc cctacaggga agagatgaac aagcgcaaac agcagcagtt taaaacgctg
    12421 atgtacggtg ccgtgctgac gggcgttgcc gccgttgcgg caacctacct gtttatcgac
    12481 aatatgatca ataaccagtc ggaaagaaac acgctgctgg aaacctccat cgcacacttg
    12541 gataccgagc tgtcggaaat acaaaagctc aaacaggaaa aagatgcctt cctgattaag
    12601 aaaaacaaag tcgaggagct ccagctcaaa cgcctccaag ccgcaaaaat cctcgacagc
    12661 ctgaatgagg ccgtccccgg aagcacctac ctgacctcgc tggatgccgt taccgccgac
    12721 tcttatcggc tcagcggcag gacatccagc gacaaccgcg ttgccgccat gatgagggcg
    12781 atgcccaata ccggcatatt caagcaaccc gaattgttaa gcatcaagaa aaacaattcg
    12841 catcaagaat ttacccttca ggcaacatta caacccatcg taaaggcggc cgaatccaaa
    12901 gagaatccgg cttcgggaaa cgcacaggag gcaaactgaa tggcttctaa atcatctaaa
    12961 accaacttgg atctcaacaa ccttcacctg ctcaaccttc ctgccaggct ttttatcgcc
    13021 ctgctggccg ttgccgccgt gctggggctc ggttatgccg gattgttcaa aagccagatg
    13081 gaatcccttg aggaatacga agcaaaagaa accgaactga aaaacaccta caaacagaaa
    13141 agtatcgacg cggccagcct gaacaacctg agggacgaac ttgcctcaat ccgctctgcc
    13201 ttcgatatca tgttgaaaca gctgccgaca gatgcagaaa ttcccaatct ggttcaagag
    13261 cttcatcagg caggttcgag caacggcctg cgcttggaca gcgttatgcc ccaacctccc
    13321 gtagatgacg gccccatcaa aagattaccc tattccattt ccattaccgg aaattacgaa
    13381 cagatcagcc aatttacccg cgatgtcggc agcctctccc gaatcattac ccttgagtcg
    13441 ctgaaaatcg cccaatctcc ggaaaacggc ggcaatcctg acggcaagag cagcatcctg
    13501 aacctcagtg ccattgccac cacctaccaa gcaaaatccg tagaagagct tgccgcagaa
    13561 gcggcacaaa atgccgagca aaaataactt acgttaggga aaccatgaaa cactatgcct
    13621 tactcatcag ctttctggct ctctccgcgt gttcccaagg ttctgaggac ctaaacgaat
    13681 ggatggcaca aacgcgacgc gaagccaaag cagaaatcat acctttccaa gcacctaccc
    13741 tgccggttgc gccggtatac agcccgccgc agcttacagg gccgaacgca ttcgacttcc
    13801 gccgcatgga aaccgacaaa aaaggggaaa atgcccccga caccaagcgt attaaagaaa
    13861 cgctggaaaa attcagtttg gaaaatatgc gttatgtcgg cattttgaag tctggacaga
    13921 aagtctccgg cttcatcgag gctgaaggtt atgtctacac tgtcggtgtc ggcaactatt
    13981 tgggacaaaa ctacggtaga atcgaaagca ttaccgacga cagcatcgtc ctgaacgagc
    14041 tgatagaaga cagcacgggc aactgggttt cccgtaaagc agaactgctg ttgaattctt
    14101 ccgacaaaaa caccgaacaa gcggcagcac ctgccgcaga acaaaattaa gaagaggatt
    14161 actccattat gaataccaaa ctgacaaaaa tcatttccgg tctctttgtc gcaaccgccg
    14221 cctttcagac agcatcggca ggaaacatta cagacatcaa agtttcctcc ctgcccaaca
    14281 aacagaaaat cgtcaaagtc agctttgaca aagagattgt caacccgacc ggcttcgtaa
    14341 cctcctcacc ggcccgcatc gccttggact ttgaacaaac cggcatttcc atggatcaac
    14401 aggtactcga atatgccgat cctctgttga gcaaaatcag tgccgcacaa aacagcagcc
    14461 gtgcgcgtct ggttctgaat ctgaacaaac cgggccaata caataccgaa gtacgcggga
    14521 acaaagtttg gatattcatt aacgaatcgg acgataccgt gtccgccccc gcacgccccg
    14581 ccgtaaaagc cgcgcctgcc gcaccggcaa aacaacaggc tgccgcaccg tctaccaagt
    14641 ccgcagtatc cgtatccaaa ccctttaccc cggcaaaaca acaggctgcc gcaccgttta
    14701 ccgagtccgt agtatccgta tccgcaccgt tcagcccggc aaaacaacag gcggcagcac
    14761 cagcaaaaca acaggcggca gcaccagcaa aacaaaccaa tatcgatttc cgcaaagacg
    14821 gcaaaaatgc cggcattatc gaattggctg cattgggctt tgccgggcag cccgacatca
    14881 gccaacagca cgaccacatc atcgttacgc tgaaaaacca taccctgccg accacgctcc
    14941 aacgcagttt ggatgtggca gactttaaaa caccggttca aaaggttacg ctgaaacgcc
    15001 tcaataacga cacccagctg attatcacaa cagccggcaa ctgggaactc gtcaacaaat
    15061 ccgccgcgcc cggatacttt accttccaag tcctgccgaa aaaacaaaac ctcgagtcag
    15121 gcggcgtgaa caatgcgccc aaaaccttca caggccggaa aatctccctt gacttccaag
    15181 atgtcgaaat ccgcaccatc ctgcagattt tggcaaaaga atccgggatg aacattgttg
    15241 ccagcgactc cgtcaacggc aaaatgaccc tctccctcaa agacgtacct tgggatcagg
    15301 ctttggattt ggttatgcag gcacgcaacc tcgatatgcg ccaacaaggg aacatcgtca
    15361 acatcgcgcc ccgcgacgag ctgcttgcca aagacaaagc cttcttacag gcggaaaaag
    15421 acattgccga tctgggcgcg ctgtattcac aaaacttcca attgaaatac aaaaatgtgg
    15481 aagaattccg cagcatcctg cgtttggaca atgccgacac aaccggaaac cgcaatacgc
    15541 ttgtcagcgg caggggcagc gtgctgatcg atcccgccac caataccctg attgttaccg
    15601 atacccgcag cgtcatcgaa aaattccgca aactgattga cgaattggac gtacccgcgc
    15661 aacaagtgat gattgaggcg cgtatcgtcg aagcggcaga cggcttctcg cgcgatttgg
    15721 gcgttaaatt cggcgcgaca ggcaagaaaa agctgaaaaa tgatacaagc gcattcggct
    15781 ggggggtaaa ctccggcttc ggcggcgacg ataaatgggg ggccgaaacc aaaatcaacc
    15841 tgccgattac cgctgccgca aacagcattt cgctggtgcg cgcgatttcc tccggtgcct
    15901 tgaatttgga attgtccgca tccgaatcgc tttcaaaaac caaaacgctt gccaatccgc
    15961 gcgtgctgac ccaaaaccgc aaagaggcca aaatcgaatc cggttacgaa attcctttca
    16021 ccgtaacctc aatcgcgaac ggcggcagca gcacgaacac ggaactcaaa aaagccgtct
    16081 tggggctgac cgttacgccg aacatcacgc ccgacggcca aatcattatg accgtcaaaa
    16141 tcaacaagga ctcgcctgcg caatgtgcct ccggtaatca gacgatcctg tgtatttcga
    16201 ccaaaaacct gaatacgcag gctatggttg aaaacggcgg cacattgatt gtcggcggta
    16261 tttatgaaga agacaacggc aatacgctga ccaaagtccc cctgttgggc gacatccccg
    16321 ttatcggcaa cctctttaaa acacgcggga aaaaaaccga ccgccgcgaa ctgctgattt
    16381 tcattacccc gaggattatg ggtacggccg gcaacagcct gcgctattga tgcgtcaaaa
    16441 taagggcata tgttttacgg catatgccct ttctttatgc tttttgccgc gaccgaaatg
    16501 ccgtcattcc cgcgcaggcg ggaatccagt ccgttcagtt tcggtcattt ctgataaatt
    16561 cctgttgctt ttcatttctg gattcccact tttgtgggaa tgacggcgga aggggtaaat
    16621 cctcgcaatc caaagcctcg tcatttccac aaaaaacagc aacccggaac agcaacttaa
    16681 aaccccgtca ttcccgcgca ggcaggaatc caacttgtcc ggttccggtt gtttttcgtc
    16741 tcgtaacttt tgagccgtca ttcccgcgca ggcgggaatc taggtctgtc ggttcaggaa
    16801 cttatcggat aaaacggttt ctccaaccct gcgttctaga ttcccacttt cgtgggaatg
    16861 acgggatatg ggtttccgtg cggacgtgtt cggatttccg cctgcgcggg aatgacggcg
    16921 acagatgccc aacggtct
//
LOCUS       DAWITQ010000027        16571 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.027, whole genome shotgun sequence.
ACCESSION   DAWITQ010000027 DAWITQ010000000
VERSION     DAWITQ010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16571)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16571)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16571
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.027"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            159..374
                     /locus_tag="WIX18_000740"
                     /pseudo
     CDS             159..374
                     /locus_tag="WIX18_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003792345.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(526..1584)
                     /gene="trpD"
                     /locus_tag="WIX18_000741"
     CDS             complement(526..1584)
                     /gene="trpD"
                     /locus_tag="WIX18_000741"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HEZ5237883.1"
                     /translation="MITPQQAIERLISNNELFYDEMTDLMRQIMSGKVPPEQIAAILT
                     GLRIKVETVSEITAAAAVMREFAAKVPLEDAEGLVDIVGTGGDGAKTFNISTTSMFVA
                     AAAGAKVAKHGGRSVSSSSGAADVVEQMGANLNLTPEQVAQSIRQTGIGFMFAPNHHS
                     AMRHVAPVRRSLGFRSIFNILGPLTNPAGAPNQLLGVFHTDLCGILSRVLQQLGSKHV
                     LVVCGEGGLDEITLTGKTRVAELKDGKISEYDIRPEDFGIETRRNLDEIKVANTQESL
                     LKMNEVLEGREGAARDIVLLNTAAALYAGNVAASLSDGISAAREAIDSGRAKSKKEEF
                     VGFQPQQRCHFLGKMELG"
     gene            complement(1648..2238)
                     /locus_tag="WIX18_000742"
     CDS             complement(1648..2238)
                     /locus_tag="WIX18_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HEZ5237884.1"
                     /translation="MLLFIDNYDSFTYNIVQYFAELGQEVAVRRNDDITLEEIEALNP
                     QYLVIGPGPCSPKEAGISVAAMRHFAGRLPIMGVCLGHQTIGEAFGGRIVRAKTLMHG
                     KVSPVSHSGKGMFKGLPNPVTCTRYHSLVIERGTLPECLEITAWTEDGEIMGVRHKEY
                     AVEGVQFHPEALLTEHGHDMLNNFLIEFQNFKPQKI"
     gene            2659..4935
                     /locus_tag="WIX18_000743"
     CDS             2659..4935
                     /locus_tag="WIX18_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ5237885.1"
                     /translation="MAQITLKPIVLSILLISTPLLVLAHETEQSVDLETVSVVGKSRP
                     RATSGLLHASTSSDKIISGDTLRQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTG
                     RRIKVLNHHGETGDMADFSPDHAIMVDTALSQQVEILRGPVTLLYSSGNVAGLVDVTD
                     GKIPEKMPENGVSGEAGLRLSSGNLEKLTSAGINIGLGNNFVLHTEGLYRKSGDYAVP
                     RYRNLKRLPDSHADSQTGSIGLSWVGEKGFIGVVYSDRRDQYGLPAHSHEYDDCHADI
                     IWQKSLINKRYLQLYPHLLTEEDIDYDNPGLSCGSHDGDGAHAHTHSGRPWIDLRNKR
                     YELRAEWKQPLPGFEALRVHLNRNDYHHDEKAGDAVENFFNNKTHNARIELRHQPIGR
                     LKGSWGVQYLGQKSSALSAIPETVQQPMLIDNNVRHYSFFGVEQANWDNFTLEGGVRV
                     EKQKASIRYDKALIDRENYYNQPLPDLGAHRQTARSFALSGNWYFTPHHKLSLTASHQ
                     ERLPSTQELYAHGKHVATNTFEVGNKHLNKERSNNIELALGYEGDRWQYNLALYRNHF
                     GNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSGADFYGAEGEIYFKPTPRYRIGVSGD
                     YVRGRLKNLPSLPGREDAYGNRPFIAQDDQNAPRVPAARLGFHLKASLTDRIDANLDY
                     YRVFAQNKLARYETRTPGHHMLNLGANYRRNTRYGEWNWYIKTDNLLNQSVYAHSSFL
                     SDTPQMGRSFTGGVNVKF"
     gene            complement(5449..6246)
                     /locus_tag="WIX18_000744"
     CDS             complement(5449..6246)
                     /locus_tag="WIX18_000744"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HEZ5237886.1"
                     /translation="MNRLYPHPIIAREGWPIIGGGLALSLLVSMCCGWWSLPFWVFTV
                     FALQFFRDPAREIPQNPEAVLSPVDGRIVVVERARDPYRDVDALKISIFMNVFNVHSQ
                     KSPADCTVTEVVYNKGKFVNADLDKASTENERNAVLATTASGREITFVQVAGLVARRI
                     LCYTQAGAKLSRGERYGFIRFGSRVDMYLPVDAQAQVAIGDKVTGVSTVLARLPLAAP
                     QIESEPESEPALQTAPVETAATPSAEQRQIEAAAAKIQAAVQDVLKD"
     gene            6401..9247
                     /gene="uvrA"
                     /locus_tag="WIX18_000745"
     CDS             6401..9247
                     /gene="uvrA"
                     /locus_tag="WIX18_000745"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEZ5237887.1"
                     /translation="MCNHHPRHSHDNDTIRIRGARTHNLKNIDLDIPRHKLVVITGLS
                     GSGKSSLAFDTLYAEGQRRYVESLSAYARQFLQMMDKPDVDLIEGLSPAISIEQKSTS
                     HNPRSTVGTVTEIHDYLRLLYARVGTPYCPEHNLPLSSQTVSQMVDAVLKLPEDTRVM
                     ILAPAVRERKGEFVDFFADLQAQGFARVRVDGEVYQLDEVPKLEKNIKHNIDVVIDRV
                     KVKADIKQRLAESFETALRHGNERALAIEMDSGEEHWFSARFACPVCSYSLPELEPRL
                     FSFNNPMGSCPTCDGLGNTNFFDSEKVVAHPELSLASGAIDGWDKRNQFYFQMIQSLA
                     RHYGFDVQAAWETLPAKIKKVVLHGSGKEVIDFTYLSERGTTFNRSHAFEGIIPNLER
                     RYRETDSETVREKLREYQNHRACPSCGGARLRKEARYVYVGGEPLHEVSAWPLTKTHR
                     FFETLDLDGNKKQIAEKILKEITERLGFLINVGLDYLNLSRSAETLSGGEAQRIRLAS
                     QIGSGLTGVMYVLDEPSIGLHQRDNDRLLATLKRLRDLGNSVIVVEHDEDAIREADFV
                     VDMGPGAGEHGGNVLIADTPENVAKCENSVTGQYLSGKKSIAVPSERTPVNPDRMLVL
                     KGARGNNLKNVTLELPLGLITCITGVSGSGKSTLINDTLAKITARELNRAQEEPAPYD
                     DIRGLEHLDKVINVDQSPIGRTPRSNPATYTGLFTPIRELFAGVPLSRERGYNVGRFS
                     FNVKGGRCEACQGDGVIKVEMHFLPDVYVPCEVCHGKRYNRETLEIQYKGKNISQVLD
                     MTVEEAREFFDAVPTVSRKLQTLMDVGLGYIRLGQSATTLSGGEAQRVKLALELSKRD
                     TGRTLYILDEPTTGLHFADIALLLEVIDRLKGKGNSIVIIEHNLDVIKTADWIVDLGP
                     EGGDGGGRIIASGSPEEVAKVKGSYTGKYLKNIL"
     gene            complement(9279..9449)
                     /locus_tag="WIX18_000746"
     CDS             complement(9279..9449)
                     /locus_tag="WIX18_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237888.1"
                     /translation="MFLGIFIALSGILTLLEMFNVISSDMKWGMPLMFTCLGFSIIFD
                     SFKAKQNRKQKE"
     gene            complement(9464..9661)
                     /locus_tag="WIX18_000747"
     CDS             complement(9464..9661)
                     /locus_tag="WIX18_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237889.1"
                     /translation="MEMIMTNKIKPGQNTGNNGGIYQEIGSRGGRKDNYATIKDNQKA
                     PPTQNPGSSWIQIKRTPDSSR"
     gene            complement(9665..9934)
                     /locus_tag="WIX18_000748"
     CDS             complement(9665..9934)
                     /locus_tag="WIX18_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237890.1"
                     /translation="MKIKFAHLRHPAVGGGYINFAVFDAKSTNGNHSVVLKELTTEAR
                     RNGLKIDQSALIFEQHGRTQFYGDKNLVDFLSANWYPQWTHTLTI"
     gene            10072..11013
                     /locus_tag="WIX18_000749"
     CDS             10072..11013
                     /locus_tag="WIX18_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family transcriptional regulator"
                     /protein_id="HEZ5237891.1"
                     /translation="MEYNAIMKTIAPSHIKPLMPELNQSQRNRIIFIDFYLCFLGKIN
                     RKDLMQAFQISPAVATRDFALYCSSFSKNLRFDTKSKFYLSTEDFEPQFPHSFENAIK
                     ILNGSLIFDIDSQHQPLLPFDLPPVLINPDVLIFSKISKALSLKKPLKISYHSISSGL
                     SEKVIVPLALVNDGFRWHLRAFDRTKNRFADFVLTRIIQANILLAENIEENETINNDI
                     DWNRIVKIELVPHPNHDEAKKVIEMDFGMTNGKLELALRASNIGYVLQQWRVDCSSDH
                     HIDDPAFRLWLLDNLVLYGINNAEHLAPAFDKKRSKP"
     gene            complement(11240..11539)
                     /locus_tag="WIX18_000750"
     CDS             complement(11240..11539)
                     /locus_tag="WIX18_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237892.1"
                     /translation="MKRQTVNQATACVRTAHTLHVDFEVPCNSQVGCVAQPRTRCWVC
                     RLRLAAAETPEEKAKDAAEEAKEEAKDAAEEAKEEAKDAAEDAKEAAEDAKEEAK"
     gene            11788..12117
                     /locus_tag="WIX18_000751"
     CDS             11788..12117
                     /locus_tag="WIX18_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ5237893.1"
                     /translation="MDVQKQYSFETVAVCVLPNHIHAIWTLPPDDADYSLLRRLIKTK
                     FSAYSPYTKNLSAGKQRQHERGIWQRRFYGHTVRDETDLQRCADYIHSNPIKQKMSRA
                     KTESCKK"
     gene            complement(12183..12323)
                     /locus_tag="WIX18_000752"
     CDS             complement(12183..12323)
                     /locus_tag="WIX18_000752"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237894.1"
                     /translation="MPSETGNRVSDGILFVISKRGSLNIPTLFLPFEAGRIFIGQTGA
                     NP"
     gene            complement(12352..13242)
                     /gene="sucD"
                     /locus_tag="WIX18_000753"
     CDS             complement(12352..13242)
                     /gene="sucD"
                     /locus_tag="WIX18_000753"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016655272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HEZ5237895.1"
                     /translation="MSVLINKDTKVLVQGFTGKNGTFHSEQALAYGTKVVGGVTPGKG
                     GQTHLNLPVFNTMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPT
                     LDMLKAKRYLETNGNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLT
                     YEAVAQTTKLGLGQSTCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEE
                     EAAEYIQSNVSKPVVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYT
                     RSPAELGTTMLEVLKTKGLA"
     gene            complement(13253..14419)
                     /gene="sucC"
                     /locus_tag="WIX18_000754"
     CDS             complement(13253..14419)
                     /gene="sucC"
                     /locus_tag="WIX18_000754"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HEZ5237896.1"
                     /translation="MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAV
                     VKAQVHAGGRGKAGGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDM
                     YPVQTELYLGAVVDRSTRRITFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQ
                     AREVAFQLGLKDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIG
                     IDSNALYRLPKIAELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDI
                     IKLKGGQPANFLDVGGGATKDRVVEAFKLILEDKSVQGVLINIFGGIVRCDMIAEAIV
                     AAVKEINVDVPVVVRLEGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAVNA"
     gene            complement(14518..14805)
                     /locus_tag="WIX18_000755"
     CDS             complement(14518..14805)
                     /locus_tag="WIX18_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237897.1"
                     /translation="MNKEIVGIFFIPMGIISMCMAALWQMYVMMTETYTLNRFKDKEL
                     VWRVALLFISFSLAVYLLCPNSRKKGIVFFILGGGGAAMYLLARMWLPFSK"
     gene            complement(14930..16363)
                     /gene="lpdA"
                     /locus_tag="WIX18_000756"
     CDS             complement(14930..16363)
                     /gene="lpdA"
                     /locus_tag="WIX18_000756"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEZ5237898.1"
                     /translation="MSQYDVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPA
                     LGGTCLNVGCIPSKALLQSSEHFHAAQHDFAEHGITVGDVKFDAAKMIERKDAIVTKL
                     TGGVKFLFQKNKVTSLFGTASFAGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRP
                     LPQVAIDNVNVLDNEGALNLTEVPAKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPT
                     FLAAADQQIAKEAFKYFTKEQGLSIELGVKIGDIKSEGKGVSVAYETAAGEAKTEVFD
                     KLIVAIGRIPNTKGLNAEAVGLEKDERGFIKVDGGCRTNLPNVWAIGDVVRGPMLAHK
                     ASDEGVAVAERIAGQKPHIDFNNVPFVIYTDPEIAWVGKTEEQLKAEGVEYKKGTSGF
                     GANGRALAMGKAKGTVKVLADAKTDRILGVHMIGPVVSELVTEGVTALEFFASSEDIA
                     RIIHAHPTLSEVVHEAALAADKRALHG"
BASE COUNT         4193 a         4460 c         3768 g         4150 t
ORIGIN      
        1 tggcgcgtcc gtcatcacgc cggcaaccgc ctttgtcatc ccttgcttat cttccatggt
       61 gcgaatcctc aaaaacgggc aaaaaaaagc cctgttactt gtagaaagta aaggacgtta
      121 atttttgtta atcgtccctt cttagggacg caatatataa ggtttatacc gtcgttgttc
      181 ctaatgcgca atcagcgaca ttgttgccaa ttatccgaaa gaaagttaag cctgatggca
      241 ttgtatacac ggataccttt cgtagttatg atgtgcttga tattagtgaa tttagccatt
      301 tacgtaagtt taacggcatt cccaaagagc atttggggct gcatttaaag aaatgccaat
      361 ggcattttaa atagaatctc aaattcagat tttaagacaa ttagttaatg ggaatttggt
      421 ctggttatct agtacagccc caagttttta tataaaaaca gtttggtaag ttctcttcgt
      481 gaagtgctta tgttttgcca caaaagttcc ataatcatgg cggcatcacc caagctccat
      541 ctttccaaga aaatggcatc tttgttgtgg ttgaaaaccg acaaactcct cttttttcga
      601 tttggccctg cctgaatcga tggcttcccg tgcggcagat atgccgtctg aaagcgaagc
      661 agcgacattt ccggcataca gggcggcggc ggtgttgagc aatacgatat cgcgcgcagc
      721 cccttctctt ccttccagca cctcattcat tttcaacaaa gattcctgag tattggcaac
      781 tttgatttca tccaaattgc ggcgggtttc gataccgaaa tcttctgggc ggatgtcgta
      841 ttcgctgatt tttccgtctt tgagctcggc aacgcgtgtt ttgcccgtca gtgtaatttc
      901 atccaaaccg ccctccccgc aaacaaccaa aacatgcttg gagccgagct gttgcaatac
      961 tctggaaagg atgccgcaca aatcggtgtg gaacacgccc aaaagctggt tcggcgcgcc
     1021 cgcaggattc gttaacggac ccaatatgtt gaaaatactt cggaaaccga gcgaacgtcg
     1081 taccggggcg acatggcgca tggcactgtg gtgattgggg gcgaacataa accctatacc
     1141 ggtctgcctg atactttggg caacctgttc gggagtcagg ttgaggtttg cccccatctg
     1201 ctccaccacg tccgccgcgc cgctggagga agagaccgac cggcctccgt gtttggcaac
     1261 cttcgcgcct gccgctgcgg caacaaacat cgaagtcgtc gaaatattga aggttttcgc
     1321 gccatccccg cccgtaccga cgatatcgac cagcccttcc gcatcctcca gcggcacttt
     1381 tgccgcaaac tcgcgcatca cggcggcggc agcggtaatc tcggaaacgg tttcaacctt
     1441 gatacgcaag ccggtcaaaa tcgccgcaat ttgttcgggc ggcacttttc cgctcataat
     1501 ctgacgcatc aagtcggtca tttcatcgta aaacaactcg ttattgctga ttaatcgttc
     1561 gatggcctgt tgcggtgtaa tcattttttg tcctccgttc aatattcgga cgaaaatgcc
     1621 gtctgaaggg cttcagacgg catcacgtca gattttttgc ggtttgaagt tttgaaattc
     1681 gattaaaaaa ttgtttaaca tatcatgtcc gtgttcggtc aagagggctt cagggtggaa
     1741 ttgtaccccc tcaacggcat attccttatg gcgcacgccc ataatctcgc cgtcttccgt
     1801 ccatgccgtg atttccaaac attcgggcag cgtgccgcgt tcgataacga ggctgtgata
     1861 acgcgtacag gtaaccggat tgggcaaacc cttaaacatc cccttgcccg aatgggacac
     1921 gggcgacacc ttaccgtgca tcagcgtttt ggcgcggact atcctgccgc cgaacgcctc
     1981 gcctatcgtc tgatgcccga ggcacacacc cataatcggc agcctgccgg cgaaatggcg
     2041 catcgccgcc acggaaatcc ccgcttcttt gggcgaacac ggaccgggtc cgataacgag
     2101 atattgcgga ttcaatgcct cgatttcctc caacgtaata tcatcgttgc ggcgcacggc
     2161 aacttcctgc cccaattctg cgaaatactg gacgatgttg taagtaaaac tgtcgtaatt
     2221 gtcgataaac aaaagcattt tgtgattaac ctattgattt ataatttatt tattattaac
     2281 tgcattttcg atacccccat tcatacccct tatatcttag cgtgcccgat gcgccctcgt
     2341 gaatctggcg cagagcctcg cgttctgacg agtacgccat tttgccacct tttcgagcgt
     2401 tcgggaacgt gccgttttta tgcactcata aattttggtt atcccgcagc cgaacataat
     2461 ggacaaacac aacggaatcc gcatcaacat caaccgcgcc cccgaatgac ggaggataca
     2521 aatggacacc gcctgatgcc gcaaccgtgt catttgaaaa acttttgcct atgccctctg
     2581 agtgttctca aaatcttatg atataaaaaa tgcaatgtta tataataaca aacttttaaa
     2641 atgcgaagag aagccaaaat ggcacaaatt acactcaaac ccattgtttt atcaattctt
     2701 ttaatcagca cacccctcct cgtcctagcg catgaaaccg agcagtcggt ggacttggaa
     2761 acggtcagcg tcgtcggcaa aagccgtccg cgtgccactt cggggctgct gcacgcttcg
     2821 acctcctccg acaaaatcat ctccggcgat accttgcgcc aaaaagccgt caacttgggc
     2881 gatgctttgg acggcgtacc gggcattcat gcctcgcaat acggcggcgg cgcgtctgct
     2941 cctgtcattc gcggtcaaac gggcaggcgg attaaagtgt tgaaccatca cggcgaaaca
     3001 ggcgatatgg cggatttttc gcccgatcac gccattatgg tagataccgc cttgtcgcaa
     3061 caggtcgaaa tcctgcgcgg gccggttacg ctcttgtaca gctcgggcaa tgtggccggt
     3121 ttggtcgatg ttaccgatgg aaaaatcccc gaaaaaatgc ctgaaaacgg cgtatcgggc
     3181 gaagccggat tacgtttgag cagcggcaat ttggaaaaac tgacatccgc aggcatcaat
     3241 atcggtttgg gcaacaactt cgtgctacat accgaaggct tgtaccgcaa atcaggcgac
     3301 tacgccgtac cgcgttaccg caatctgaaa cggctgcccg acagccacgc cgattcgcaa
     3361 acaggcagca tcgggctgtc ttgggttggc gaaaaaggct ttatcggcgt ggtgtacagc
     3421 gaccgcagag accaatacgg cctgcctgcc cacagccacg aatacgatga ttgccacgcc
     3481 gacatcattt ggcaaaagag tttgattaac aaacgctatt tgcagcttta tccgcacttg
     3541 ttgaccgaag aagacatcga ttacgacaat ccgggtttga gctgcggttc tcacgacggt
     3601 gacggtgcac acgcacacac ccacagcggc agaccgtgga tagacctgcg caacaaacgc
     3661 tacgaactcc gtgccgaatg gaagcagccg ctccccggtt ttgaagccct gcgcgtacac
     3721 ctgaaccgca acgactacca ccacgacgaa aaagcaggcg atgcagtaga aaacttcttc
     3781 aacaacaaaa cacacaacgc ccgtatcgag ttgcgccacc aacccatagg ccgtctgaaa
     3841 ggcagctggg gcgtgcaata tttgggacaa aaatccagcg cactttccgc cattcccgaa
     3901 accgtccaac aaccgatgtt gattgacaac aatgtgcgcc attacagctt tttcggtgta
     3961 gaacaggcaa actgggacaa cttcacgctt gaaggcggcg tacgcgtgga aaaacaaaaa
     4021 gcctccatcc gatacgacaa agcattgatt gatcgggaaa actactacaa ccagccccta
     4081 cccgatctcg gcgcgcaccg ccaaaccgcc cgctcattcg cactttcggg caactggtat
     4141 ttcacgccgc accacaaact cagcctgacc gcctcccatc aggaacgcct accgtcaacg
     4201 caagagctgt acgcacacgg caaacacgtc gccaccaaca cttttgaagt cggcaacaaa
     4261 cacctcaaca aagagcgttc caacaacatc gaactcgcgc tgggctacga aggcgaccgc
     4321 tggcaataca atctggcact ctaccgcaac catttcggca actacattta cgcccaaacc
     4381 ttaaacgacg gacgcggccc caaatccatc gaagacgaca gcgaaatgaa gctcgtacgc
     4441 tacaaccaat ccggtgcgga cttctacggc gcagaaggcg aaatctactt caaaccgaca
     4501 ccgcgctacc gcatcggcgt ttccggcgac tatgtacgag gccgtctgaa aaacctgcct
     4561 tccctacccg gcagggaaga tgcctacggc aaccgtcctt tcatcgcaca ggacgaccaa
     4621 aatgcccccc gtgttccggc tgcgcgcctc ggcttccacc tgaaagcctc gctgaccgac
     4681 cgtatcgatg ccaatttgga ctactaccgc gtgttcgccc aaaacaaact cgcccgctac
     4741 gaaacgcgca cgcccggaca ccatatgctc aacctcggcg caaactaccg ccgcaatacg
     4801 cgctatggcg agtggaattg gtacatcaaa accgacaacc tgctcaacca atccgtttac
     4861 gcccacagca gcttcctctc tgatacgccg caaatgggtc gcagctttac cggcggcgtg
     4921 aacgtgaagt tttaaaacta gataggcaaa caaaaaaggt tttcagacgg cattctgaaa
     4981 accttttttc tttttaatca atttgttagg aaatatgaca aagacaaaga acaaaccact
     5041 atgccatcat tcccattttt ttgtttcatc attcttgctt tcacgccgtc attctcgcaa
     5101 aagcagaaac ccatcattcc cgcgcaggcg ggaatccaat tcattcggtt tcagccgttt
     5161 ccgataaatc gccttagcat ttgggttcta gattcccact ttcgtgggaa tgaggcggaa
     5221 aggtttctgt tttttaagtt ttaggtaact aataagtcgt cattcccgcg caggcgggaa
     5281 tacaattcgt tcggtttctg ttatttctga taaatcaccg taacgttaag ttcccagatt
     5341 tccactttcg tgaacataac ggtgtgaaca ttagcaaaaa ttcaaaaaac caaacttcct
     5401 cattcgtgtg aatgatggta ctgatatttt ctatttcagt tcgcaaaatt aatctttcaa
     5461 cacatcttgc acagccgcct gaatcttagc cgccgctgcc tcgatttgcc gttgttcggc
     5521 agatggggtt gccgctgttt caaccggagc agtttgtaaa gcaggctcag attcaggctc
     5581 ggattcgatt tgcggcgcag ccagcggcaa acgcgccaat acagtgctga cgccggttac
     5641 tttatcgcca atcgccactt gcgcctgcgc atcgacaggc agatacatat ccacgcgcga
     5701 accgaagcga ataaagccat agcgttcgcc gcgggacagt ttcgcacctg cttgggtgta
     5761 gcacaaaata cggcgcgcca ccaaaccggc cacttgaaca aaagtaattt cacgaccaga
     5821 agccgtcgtc gccaaaaccg cgttgcgttc gttttccgtg ctggctttgt ccaaatccgc
     5881 atttacgaat ttgcctttgt tatagaccac ttccgttacc gtacaatcgg caggcgattt
     5941 ttgcgaatgc acgttgaaca cgttcataaa aatactgatt ttcaaagcat cgacatcacg
     6001 atacggatcg cgtgcgcgct cgaccaccac aatgcggccg tcaacagggc tcaacaccgc
     6061 ttcaggattt tgcggaatct cacgcgcagg gtcgcggaaa aactgcaatg caaatacggt
     6121 aaacacccaa aacggcaaag accaccagcc gcagcacatc gacaccagca ggctcaaagc
     6181 caaaccgccg ccgataatcg gccagccctc acgggcgata atcgggtggg ggtaaagacg
     6241 gttcatttgt catccttcta ttcaagcggg ttaaaattgc cgccattata acggaatccg
     6301 ccgcattccg ccgacaaatg ccgtctgaac gcggcttcag acagcatccg agaaagtgct
     6361 acaatatcgg ttttccttta tttttcaggc ggcatccatt atgtgcaacc atcatccccg
     6421 acattcgcac gacaacgaca ccatccgcat acgcggcgca cgcacgcata atttgaaaaa
     6481 catcgatttg gacattccgc gccacaagct cgtggtcata acaggattgt caggcagcgg
     6541 caaatcatcg ctggcatttg acacgctgta tgccgaaggg cagcggcgtt atgtcgagag
     6601 cctttccgcc tatgcccgtc aatttttaca gatgatggac aaacccgatg tcgatttgat
     6661 cgaaggcctc tcgcccgcga tttccatcga gcaaaaatcc accagccaca atccgcgttc
     6721 caccgtcggc acggtaactg aaatccacga ttacctgcgc cttttgtacg cccgcgtcgg
     6781 cacgccgtat tgccccgaac acaatctgcc gctatccagc cagaccgtgt cgcagatggt
     6841 tgatgccgtg ttgaagctgc cggaagacac gcgcgtgatg attctggcgc cggcggtacg
     6901 cgagcgtaaa ggtgagtttg tcgatttctt tgccgacttg caggcgcagg gctttgcacg
     6961 ggtgcgagtg gacggcgagg tctatcagct tgacgaagtg ccgaagctgg aaaaaaacat
     7021 caagcacaat atcgatgtcg tcatcgaccg cgtgaaagta aaagctgaca tcaagcaacg
     7081 gctggcagaa agttttgaaa ccgctctgcg ccacggcaac gaacgcgcac tggcgataga
     7141 gatggacagc ggcgaagagc attggttttc cgcgcgtttc gcctgccccg tatgttcgta
     7201 cagcctgccc gaattggagc cgcgcctctt ttcgttcaac aacccgatgg gctcctgccc
     7261 gacttgcgac ggcttgggta acaccaattt cttcgactcc gaaaaagtgg tcgcgcatcc
     7321 cgaattgtcg ctggcttcgg gcgcgattga cggctgggac aagcgcaacc agttctattt
     7381 ccaaatgatt cagtcgctgg cgcggcatta cggtttcgac gtgcaggctg cttgggaaac
     7441 cctacctgca aaaatcaaaa aagtcgtgtt gcacggctcg ggcaaagaag tcattgattt
     7501 cacttacctg tccgaacgcg gcaccacctt caaccgcagc cacgccttcg aaggcatcat
     7561 ccccaatctc gaacgccgct accgcgaaac cgacagcgaa accgtgcgcg aaaaactgcg
     7621 cgaataccaa aaccaccgcg cttgcccgag ctgcggcggc gcacgtttgc gcaaagaagc
     7681 ccgctacgtt tacgtcggcg gcgagccgtt gcacgaagtt tccgcctggc cgctgaccaa
     7741 aacccaccga ttctttgaaa cgctggattt ggacggcaac aaaaaacaaa tcgccgaaaa
     7801 aatcctcaaa gaaatcaccg aacgtctcgg ctttttgatt aatgtcgggc tggattacct
     7861 gaatctctcc cgttccgccg aaaccctttc cggcggcgaa gcccagcgca tccgcctcgc
     7921 cagccaaatc ggcagcggcc tgaccggcgt gatgtacgtt ttggacgaac cctccatcgg
     7981 cctgcaccag cgcgacaacg accgcctgct tgccaccctc aaacgcctgc gcgatttggg
     8041 caacagcgtc atcgtggtcg aacacgacga agacgccatc cgcgaagccg atttcgtcgt
     8101 cgatatgggc ccgggcgcag gcgaacacgg cggcaacgta ttgattgccg acacgcccga
     8161 aaacgtcgcc aaatgcgaaa actccgttac cggacaatac ctcagcggca aaaaatccat
     8221 tgccgtgccg tctgaacgca cgccagtcaa tcccgaccga atgctcgtcc tcaaaggcgc
     8281 gcgcggcaac aacctcaaaa acgttaccct tgagctgccg ctcggtttga ttacctgcat
     8341 caccggcgta tccggcagcg gcaaatccac cctgattaac gacaccctcg ccaaaatcac
     8401 cgcccgcgaa ctcaaccgcg cccaagaaga acccgcccca tacgacgaca tccgcggcct
     8461 cgaacacctc gacaaagtca tcaacgtcga ccaatccccc atcggccgca ccccgcgctc
     8521 caaccccgcc acctacaccg gcctgttcac ccccatccgc gaactcttcg ccggtgtacc
     8581 cctctcgcgc gaacgcggct acaacgtcgg cagattctcc ttcaacgtca aaggcggccg
     8641 ctgcgaagcc tgccaaggcg acggcgtcat caaagtcgaa atgcacttcc tgcccgacgt
     8701 gtacgtcccc tgcgaagtct gccacggcaa acgctacaac cgcgaaacgc tcgaaatcca
     8761 atacaaaggc aaaaacatca gccaagtcct cgacatgacc gtcgaagaag cccgtgaatt
     8821 tttcgacgcc gtccccaccg tatcgcgcaa actgcaaacc ttgatggacg taggcttagg
     8881 ctacatccgt ctcggccaat ccgccaccac cctctccggc ggcgaagccc agcgcgtcaa
     8941 actcgccttg gaactctcca aacgcgacac cggcagaacg ctctacatcc tcgacgaacc
     9001 caccaccggc ctacacttcg ccgacatcgc cctgctgctg gaagtcatag accgtctgaa
     9061 aggcaaaggc aactcgatag tgattatcga gcataatctg gatgtgatta aaaccgccga
     9121 ttggattgtg gacttagggc cagaaggcgg cgacggcgga gggaggatta ttgcttcagg
     9181 tagcccggag gaagtggcga aggttaaggg gagttatact gggaagtatt tgaagaatat
     9241 actttaaaaa acgggatggt ttaaaccatc ccgttttttt attccttctg ttttcgattt
     9301 tgtttggctt tgaagctatc aaaaataatg ctaaatccca aacaggtgaa cattaaaggc
     9361 atcccccatt tcatatccga agaaataaca ttaaacattt ctaataatgt aagaatgcct
     9421 gataaagcta taaaaatacc taaaaacatt agaactatcc ttattatctg gagctatctg
     9481 gagttctttt aatttgaatc catgagcttc ctggattttg agtgggtggt gctttttgat
     9541 tatctttaat ggttgcgtag ttatcttttc gaccacctcg tgaaccaatt tcttgataaa
     9601 ttccaccgtt atttcctgta ttttgaccag gtttgatttt gttcgtcatt atcatctcca
     9661 taatttaaat agttaaagta tgagtccatt gcggatacca atttgcagat aaaaaatcta
     9721 ctagattttt gtctccatag aattgtgtac gcccatgttg ttcaaatatt aacgcagatt
     9781 ggtcaatttt taatccattt ctacgagctt cagtggtcaa ttccttcagt acgacactat
     9841 ggttaccatt agttgattta gcatcaaaaa cagcaaagtt aatatatcct ccacctacgg
     9901 ctggatgtct taagtgagca aattttattt tcataaataa atcctataaa aaattacata
     9961 acagaaattt taagtcagag agctactatg aagtagcttt ttgcattata tgcactcttt
    10021 ttgattacgt caagcaattt ttttgaattc atattgccat gaaaaagatt gatggaatat
    10081 aatgcaatta tgaaaacaat cgctccttcc catataaagc cccttatgcc agagttgaac
    10141 caatctcaac gcaataggat tatatttatt gatttctatc tatgctttct aggaaagata
    10201 aatagaaaag atttgatgca ggcatttcaa atttccccag ctgttgctac tagggatttt
    10261 gcgctatatt gctctagttt ttcgaaaaat ctccgttttg ataccaaaag taaattttac
    10321 ctctctactg aagactttga acctcaattc ccccattcat ttgaaaatgc aattaaaatt
    10381 cttaatggca gtttaatatt tgatattgat tcccaacatc aacctcttct tccgtttgat
    10441 ttacctcctg ttttaataaa tcctgatgtc ttaatctttt ctaaaatatc gaaagcatta
    10501 tccttaaaaa aacctctaaa aatctcatat cattcaattt catctggatt atctgagaaa
    10561 gttattgtgc ctcttgctct agttaatgac ggatttcgat ggcatttacg ggcattcgat
    10621 agaacaaaaa accgatttgc agattttgtc ctaacacgaa taattcaagc aaatatttta
    10681 ttagctgaaa atattgaaga aaatgaaacg attaacaatg atattgattg gaatagaatt
    10741 gttaaaatcg agttggttcc ccatcctaat catgatgaag ctaaaaaagt gattgaaatg
    10801 gactttggaa tgacaaatgg aaaattagaa ttggcgctta gagcttcaaa tatcggatat
    10861 gttttacagc aatggcgagt cgattgttcg tcagatcatc atatcgatga tcctgctttt
    10921 agattatggc tgttagataa tttagtttta tacggcatca acaatgctga acacttagcg
    10981 cctgcctttg ataaaaaacg tagcaagccg tagcctacat atccaaccga ccgcgtgcgt
    11041 ggctgcgcca cacacgcggt tgtttgattg atggctttct gttgtaaatt gaacttagtt
    11101 aaaactaaca ctttcagacg gcatgaaaaa tggccgtctg aaaactgaaa aagctttatc
    11161 taaaacaact accctaactc acaaaacaaa aaacggattc ccaatcattg gaatccgttt
    11221 ttctgtaaag ctatccgaat tatttagctt cttctttagc gtcttcagca gcttctttgg
    11281 catcttccgc tgcgtctttt gcttcttctt tagcctcttc agcggcgtct tttgcttctt
    11341 ctttagcctc ttcagcggcg tctttggctt tttcttcagg agtttctgca gcagcaagcc
    11401 gtagcctgca tacccaacac cgcgtgcgtg gctgcgccac acaccctacc tgtgaattac
    11461 acggaacttc aaaatcaacg tgtagggtgt gtgcggtacg cacgcacgcg gttgcttgat
    11521 tgacggtttg ccgtttcaac ttttaacttc gttgaagcta gcgctttcag acggcctcca
    11581 atgtcgtctg aaagcgctag cttcaacgaa gttaaaaacc ttaaacaaca agccattcct
    11641 tctccaacgc tcaaaccaaa aacaaaaatc ctatggcgcg ttatcgcaga aacttcattg
    11701 ccggcggcac attctttttc accgtcaaac tcgccgaccc gaaatcgcgc ctgcttgtcg
    11761 aacatatcga cttcgcgggc ggcttatatg gatgtgcaaa aacaatattc ctttgaaacc
    11821 gtcgccgtat gcgtgctgcc gaaccatatt cacgccattt ggacgctgcc gcccgacgat
    11881 gcggattatt ccctactccg gcggctgatt aaaaccaaat tctccgcata ttccccttat
    11941 actaaaaact tatccgccgg caaacagcgg cagcacgaac gcggtatttg gcaacggcgt
    12001 ttttacggac acaccgtgcg cgacgaaacg gatttgcagc gttgcgcgga ctacatccat
    12061 tccaatccta tcaaacaaaa aatgtcgcgt gctaaaacag aatcctgcaa aaaataatat
    12121 cagtcttttc aaatgcgata gttatcattc cccaacttca aacaaggcgt gtgcaacctg
    12181 acttacgggt ttgctcctgt ttgaccgata aatattctgc ctgcctcaaa gggcaaaaat
    12241 aatgtgggta tgttgaggct gcctcttttt gaaatgacaa acaaaatgcc gtctgaaacc
    12301 cgatttccgg tttcagacgg catttgatgt tcaatcagtt gtcaaacctg attatgccaa
    12361 accttttgtt ttcaacactt ccagcatggt agtgcccaac tcggcagggc tgcgggtgta
    12421 agcgataccg gctttttcaa acgcggcgaa tttttcctcg gcagtacctt tgccgccgga
    12481 aataatcgca ccggcgtggc ccatgcgttt gcctttagga gcggtaacac cggcgatgta
    12541 gccgacaaca ggtttgctta cgttggattg gatgtattcg gctgcttctt cttccgcagt
    12601 accgccgatt tcaccgatca tgatgatggc gtcggtatct gggtcttctt ggaaaagttt
    12661 cagtgcgtcg atttggttca taccgggaat cgggtcgccg ccgataccga tacaggttga
    12721 ttgacccaag cccagtttgg tggtttgtgc cacggcttcg taagtcaatg taccggaacg
    12781 ggaaataata ccgatgcggc ccggagtgtg gatgtggccc ggcataatac cgattttgca
    12841 ctcgcctggg gtaatcacgc ccgggcagtt agggccgacc aagcgggtac cgttgccgtt
    12901 ggtttccaag taacgtttgg ctttgagcat gtccagagtc ggcacgcctt cggtaatcac
    12961 aaccaccaag cctacgccgg aatcaacggc ttcaacgata gaatccaaca caaacggagc
    13021 gggaacgtaa attacagatg catccgcgcc ggtttcttta acggcttctt tcatggtgtt
    13081 gaacacgggc aggttcaggt gggtttgacc gcctttgccc ggggtcacgc cgccgacaac
    13141 tttagtgccg taagccagag cttgttcgga gtggaaagta ccgtttttac cggtgaaacc
    13201 ttgaaccaat actttggtgt ctttattaat caatacgctc attcttttct ccttaggcgt
    13261 ttacggctgc gacaattttt tcggctgcgt cattcaggcc gtctgcagaa gtcagtttca
    13321 gacctgattc gttcaggatt ttcgcgccga gttcggcgtt gttgccttcc aaacgaacaa
    13381 cgacaggaac gtcgacgttg atttctttaa cggctgccac gatggcttcc gcaatcatgt
    13441 cgcaacgtac gataccgccg aagatgttga tcaatacgcc ttgaacggat ttgtcttcca
    13501 gaatcagttt gaacgcttca accacgcggt ctttggttgc gccgccgcca acgtccaaga
    13561 agttggcagg ttggccgcct ttcagtttga tgatgtccat agtggccatc gccaaaccgg
    13621 caccgttcac catacagccg atgttgcctt ccagggcaac atagttcagg tcaaattcag
    13681 aagctttcaa ctcgcgttcg ttttcttgag atttgtcgcg caattcggcg attttcggca
    13741 ggcggtagag cgcgttgctg tcgatgccga ttttgccgtc cacgcaggcg agcgcgccgt
    13801 tttcgcgaac tgccagcggg tttacttcaa acagggcgaa gtcattttcg acaaacgctt
    13861 tgtacgcacc ggtcatcagt ttgacgaact cgttgatttg tttgtctttc aagcccagtt
    13921 ggaacgcaac ttcgcgagct tggcaaggtt gcaggccgac cagcggatca acggttactt
    13981 tgaagatttt ttcaggagtt tcggcagcaa ctttttcgat ttccacgccg ccttcggtag
    14041 aggccatgaa tgtaatgcgg cgggtagaac ggtcaaccac tgcgcccaag tacagctcgg
    14101 tttgaaccgg atacatgtct tcgcaaacca aaacactgtt gacaggttgg ccgttggcat
    14161 cggtttggta agttaccaag ttggtgccaa tcaggctttc agccacttct ttagcttctt
    14221 cgcggctttt aacgactttt acgccgcccg ctttaccgcg gccgccggcg tgtacttgtg
    14281 ctttgacaac agcgaatttg ccgcccaatt tgtcgtaagc tgcagcggct tcttcgccgt
    14341 tgtgtgccaa aataccgcct tgtacgggca aaccgtagct agccagcagt tctttagcct
    14401 gatactcgtg taaattcatg gatttctcct ttagattagt ggaatgcccc gagtctgcct
    14461 ccaaatggca agcccgtgcg tttcagacta cctttcggcg gtcggaaaat cgtcgtttca
    14521 cttgctgaaa ggcaaccaca tccgcgccag cagatacatg gctgcaccgc ctcccccgag
    14581 aataaaaaag acgatgcctt ttttacgcga attcggacag agcagataaa cggcaaggct
    14641 gaaactgata aacaacaatg ccacgcgcca aaccaattct ttatctttga aacggttgag
    14701 cgtataagtt tcggtcatca tcacatacat ctgccacaat gcggccatac acatgctgat
    14761 gatgcccatc ggtataaaga aaataccgac tatttctttg ttcataacga atgtaaatgc
    14821 tgtttgtttg tctgacggaa ttataaatca gaaaacggag ctctcggaac attcaatttg
    14881 tcgaaggcat taaggtcgtc tgaaaaattt cagacgacct taatgtctat caaccgtgca
    14941 aagcgcgttt gtcggccgcc aatgcagctt cgtgaaccac ttcggacaag gttgggtggg
    15001 catggataat gcgggcgatg tcttcgctgc tggcgaagaa ttcgagcgca gtcacgcctt
    15061 cggtaaccaa ttcgctgaca accgggccaa tcatgtgtac gcccaagatg cggtcggttt
    15121 tggcatctgc caatacttta accgtacctt tggctttgcc cattgccaat gcgcgaccat
    15181 tcgcaccaaa acctgaagta ccttttttgt actccacgcc ttcggctttg agctgctctt
    15241 cggttttacc cacccaagcg atttcaggat cggtgtaaat cacgaacggt acgttgttga
    15301 agtcgatatg cggtttttga ccggcaatgc gttcggcaac ggcaacgcct tcgtcgctgg
    15361 ctttgtgtgc caacatcggg ccgcgaacca cgtcgccgat tgcccatacg ttaggcaggt
    15421 tggtacggca tccgccatct actttgataa agccgcgctc gtctttttcc aagcctacgg
    15481 cttccgcgtt caggcctttg gtgtttggaa tacggccgat ggcaacgatc agtttgtcga
    15541 atacttcggt tttggcttcg ccggcagcag tttcgtaagc aacggaaaca cctttgcctt
    15601 cagacttgat gtcgccgatt ttcacgccca attcgatgct cagaccttgc tctttggtga
    15661 agtatttgaa ggcttctttg gcgatttgtt ggtcggcggc agccaggaag gtcggcgcgg
    15721 cttcaagaat ggtaacttcc gcacccacgc ggttccatac ggaacccatt tccaaaccaa
    15781 tcacaccgga accgatcacg ccgagtttgg caggtacttc ggtcaggttc aatgcgcctt
    15841 cgttgtccaa tacgttcaca ttgtcgatag cgacttgtgg cagcggacgc ggtacggaac
    15901 cggtcgctac gatgacgtgt ttggcttcga taacggtttt ctctcctttg ttatcgactt
    15961 cgatttggta agcatcgcca tttttaccgg caaaggaagc cgtaccgaac agactggtta
    16021 ctttattttt ttggaacagg aatttcacgc cgccggtcag tttggtcacg atggcatctt
    16081 tgcgctcaat cattttggcc gcgtcgaatt ttacgtcacc gacagtgata ccgtgttcgg
    16141 caaaatcgtg ttgcgcagcg tggaaatgtt cgctggattg caacagggct ttagaaggga
    16201 tacaacctac gttcaagcaa gtaccgccca atgcaggggc attgcctgct ttgttaacgc
    16261 ctgcatcgac acaggcagtt ttgaaaccca gttgtgcggc acggatggcg gcaacgtatc
    16321 cgcccgggcc tgcaccaatc actactacat catattgaga catcgtgtca tcctttgctt
    16381 ttagcagtat ctcaaaataa aaacgatact tttcgtttct tttttatttt gaatgactgc
    16441 gttttgatgg ttttaagaaa aagccgtctg aaagtccata tctgccgatt cattcgaatc
    16501 aaatgtttca gacgacctca atcgttcgtt gagcctattg tagcacgata ctacattacg
    16561 ctacatctaa a
//
LOCUS       DAWITQ010000028        16440 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.028, whole genome shotgun sequence.
ACCESSION   DAWITQ010000028 DAWITQ010000000
VERSION     DAWITQ010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16440)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16440)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16440
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.028"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            209..1273
                     /locus_tag="WIX18_000757"
     CDS             209..1273
                     /locus_tag="WIX18_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-butanediol dehydrogenase"
                     /protein_id="HEZ5237899.1"
                     /translation="MKAARFYDKGDIRIEDIPEPTVAPGTVGINVAWCGICGTDLHEF
                     MEGPIFIPPCGHPHPISGESAPVTMGHEFSGVVYAVGEGVDDIKVGQHVVVEPYIIRD
                     DVPTGEGSNYHLSKDMNFIGLGGCGGGLSEKIAVKRRWVHPISDKIPLDQAALIEPLS
                     VGHHAYVRSGAKAGDVALVGGAGPIGLLLAAVLKAKGIKVIITELSKARKDKARESGV
                     ADYILDPSEVDVVEEVKKLTNGEGVDVAFECTSVNKVLDTLVEACKPAANLVIVSIWS
                     HPATVNVHSVVMKELDVRGTIAYCNDHAETIKLVEEGKINLEPFITQRIKLDELVSEG
                     FERLIHNNESAVKIIVSPNL"
     gene            1414..1737
                     /locus_tag="WIX18_000758"
     CDS             1414..1737
                     /locus_tag="WIX18_000758"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HEZ5237900.1"
                     /translation="MGDSVLSAIQQTITQRKSANPSESYVAQLLHKGEDKILKKVIEE
                     AGEVLMASKDKNPSHLVYEVADLWFHTMILLTHHDLKAEDVLDELARRQGLSGLAEKA
                     ARTES"
     gene            1809..2132
                     /locus_tag="WIX18_000759"
     CDS             1809..2132
                     /locus_tag="WIX18_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HEZ5237901.1"
                     /translation="MDNCIFCKIAAKDIPAQTVYEDGEMVCFKDINPAAPVHLLLIPK
                     VHFDSLAHAAPEHQPLLGKMMLKVPEIAKAAGLADGFKTLINTGKGGGQEVFHLHIHI
                     MGTPV"
     gene            2179..2382
                     /gene="tatA"
                     /locus_tag="WIX18_000760"
     CDS             2179..2382
                     /gene="tatA"
                     /locus_tag="WIX18_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HEZ5237902.1"
                     /translation="MGSFSLTHWIIVLIIVVLIFGTKKLRNVGKDLGGAVHDFKQGLN
                     EGTDGKEAQKDDVIEHKKDEDKA"
     gene            2386..3072
                     /gene="tatB"
                     /locus_tag="WIX18_000761"
     CDS             2386..3072
                     /gene="tatB"
                     /locus_tag="WIX18_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatB"
                     /protein_id="HEZ5237903.1"
                     /translation="MFDFGLGELVFVGIIALIVLGPERLPEAARTAGRLIGRLQRFVG
                     SVKQEFDTQIELEELRKAKQEFEAAAAQVRDSLKETGTDMQNSLHDISDGLKPWEKLP
                     EQRTPADFGVDENGNPFPDAANTLSDGISDVMPSERSYTSAEILGDSGQTGSTAEPAE
                     TDQDRAWREYLTASAAAPVVQTVEVSYIDTAVETPVPHTTSLRKQAISRKRDLRPKSR
                     AKPKLRVRKS"
     gene            3086..3856
                     /gene="tatC"
                     /locus_tag="WIX18_000762"
     CDS             3086..3856
                     /gene="tatC"
                     /locus_tag="WIX18_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HEZ5237904.1"
                     /translation="MSETQNEQPVQPLVEHLIELRRRLMWTVVGILVCFFGLMPFAQQ
                     LYTFIADPLMANLPKDTSMIATDVIAPFFVPVKVTLMAAFLISLPHTLYQIWAFVAPA
                     LYQNEKRLITPLVLSSVSLFFIGMAFAYFLVFPVIFKFLASVTPVGVNMATDIDKYLS
                     FILGMFVAFGTTFEVPIVVILLTKISVVTTGQLKRARPYVIVGAFVIAAIITPPDVIS
                     QTLLAIPLILLYEAGIWFGRFFTPRSEQDGDIQPPATT"
     gene            3909..4517
                     /gene="maf"
                     /locus_tag="WIX18_000763"
     CDS             3909..4517
                     /gene="maf"
                     /locus_tag="WIX18_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HEZ5237905.1"
                     /translation="MNTLYLGSNSPRRMEILTQLGYQVVKLPADINETVRQNEDPARY
                     VQRMAEEKNRTALTLFCETNGTMPDFPLITADTCVVSDGIILGKPRSQAEAIEFLNRL
                     SGKQHTVLTAVCIHYRGKTSSRVQTNRVVFKPLSSEEISAYVQSGEPMDKAGAYAVQG
                     IGGIFIQSIEGSFSGIMGLPVYETVSMLQDLGYRSPLSALKP"
     gene            4526..4879
                     /locus_tag="WIX18_000764"
     CDS             4526..4879
                     /locus_tag="WIX18_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2069 domain-containing protein"
                     /protein_id="HEZ5237906.1"
                     /translation="MNRQTAYLLTSFSLIALIILSLSWELWIAPLRPGGSWLALKALP
                     LCLPLSGILKKKIYTYQYSSMLVLIYFAEAVMRLFDAYPAEQICAALSAVFSIIFFIS
                     CLSFVKQYKETNNAR"
     gene            4869..6683
                     /locus_tag="WIX18_000765"
     CDS             4869..6683
                     /locus_tag="WIX18_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase C-terminal domain-containing
                     protein"
                     /protein_id="HEZ5237907.1"
                     /translation="MPAETTVSGAHPAAKLPIYILPCFLWIGIIPFTFALRQQPSPDF
                     YHDAAAAAGLIVLLFLTAGKKLFDVKIPAISFLLFAMAAFWYLQARLMNLIYPGMNDI
                     VSWIFILLAVSAWACRSLVAHFGQERIVTLFAWSLLIGSLLQSCIVVIQFAGWEDTPL
                     FQNIIVYSGQGVIGHIGQRNNLGHYLMWGILASAYLNGQRKIPAALGVICLIMQTAVL
                     GLVNSRTILTYIAAIALILPFWYFRSDKSNRRTMLGIAAAVFLTALFQFSMNTILETF
                     TGIRYETAVERVANGGFTDLPRQIEWNKALAAFQSAPIFGHGWNSFAQQTFLINAEQH
                     NIYDNLLSNLFTHSHNIVLQLLAEMGISGTLLVAATLLTGIAGLLKRPLTPASLFLIC
                     TLAVSMCHSMLEYPLWYVYFLIPFGLMLFLSPAEASDGIAFKKAANLGILTASAAIFA
                     GLLHLDWTYTRLVNAFSPATDDSAKTLNRKINELRYISANSPMLSFYADFSLVNFALP
                     EYPETQTWAEEATLKSLKYRPHSATYRIALYLMRQGKVAEAKQWMRATQSYYPYLMPR
                     YADEIRKLPVWAPLLPELLKDCKAFAAAPGHPEAKPCK"
     gene            6873..7550
                     /locus_tag="WIX18_000766"
     CDS             6873..7550
                     /locus_tag="WIX18_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEZ5237908.1"
                     /translation="MSRVLLVDDDALLTELLTEYLSAEGLNVRSVPDGEAGVQEILSG
                     QYDVVVLDSMMPKMNGLDVLKNVRARSTVPIIMLTAKGDDIDRIIGLEMGADDYVPKP
                     CTPRELLARINAILRRAQHSGEQNNAPNSISVSDVVLYPAKRQASVKDMPLELTSTEF
                     NLLEVLMRHAGQVVSKETLSVEALDRKLAKFDRSIDVHISSIRHKLGDASLIQTVRGL
                     GYLFVKN"
     gene            7563..8969
                     /locus_tag="WIX18_000767"
     CDS             7563..8969
                     /locus_tag="WIX18_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEZ5237909.1"
                     /translation="MKLFQRIFATFCAVIVCAIFVASFSFWLVQNTLAENQFNQRRTI
                     ETTLMGSIISAFRARGDAGAREILTEWKDSPVSSGVYVIQGDEKKDILNRYIDSYTIE
                     RARLFAAGHPHSNLVHIEYDRFGEEYLFFTKDWDKLQARRLPSPLLIPGLPLAPIWHE
                     LIILSFIIVVGLLMAYILAGNIAKPIRILGNGMDRVANGELETRISQQVDDRDDELSH
                     LAIQFDKMVEKLEKLVAKERHLLHHVSHEMRSPLARMQAIVGLIQAQPQKQEQYLKRL
                     EGELTRMDTLAGELLTLSRLETSNMALEKESLKLLPFLGNLVEDNQSIAQKNGQTVTL
                     SADGKIPENTTILANESYLYRAFDNVIRNAVNYSPEGSTILINIGQDHKHWIIDVTDN
                     GPGVDEMQLPHIFTAFYRADSSANKPGTGLGLALTQHIIEQHCGKIIAENIKPNGLRM
                     RFILPKKKTGSKTEKSAN"
     gene            9087..11513
                     /locus_tag="WIX18_000768"
     CDS             9087..11513
                     /locus_tag="WIX18_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetate--CoA ligase family
                     protein/GNAT family N-acetyltransferase"
                     /protein_id="HEZ5237910.1"
                     /translation="MSAQTDPGYFFMPNHIILIGASERPYSLGERVLSNLLSTPFQGK
                     ITPVNPRHHTIAGLPAYTSLNKIPGNADLIIAVTLPDSYDTLFKTCRKKQLRHIILIQ
                     DWDSLSAAELHTAETAIRKHHGNGLNITACTTAGIQLPSLGLNISTQDGYAAGHTAIL
                     TGNAAVSRQIDNILNKLRQGTSRHISLHPGISPITSADWLNRFGHSLHTKTAVLHHNP
                     EENQRKLFSAIRQFTRHTPLILHITCRTTETDRAVLHCLARHCNFLISFNADDLEAAL
                     RAQLSDLPPLSRLDILSDTPAEWLNAHAPKTLALHFPNLPHHIRNGHLTGTPTPSICH
                     DIASRQLARPDTQAVLTILSPSGHEDYKKTARALIRLSEQSAKPLLVSSPFSDGITHF
                     DTPTQAIRTLSYRNTAAALKQAQLDIAPPQPCRLKTPQPQNIKKALEAADPALIAEAL
                     HLPPYRHTTHNAVQFQFGSHSLYGDILTARCNGQTTAVLPPFTTLDSRHLARFAELDG
                     TQTLDQFLHTLTIIPEYRQHILGITLNLNGGQYSSDFILKTPETHDTPKRKNTGKAAQ
                     TLEHAAAKMQSAAAYLKHKNPTAAEFLRHTSEAAAELLGSKTETGAAVPNVLAPYPAA
                     YPKTLSLRNNTTVTITPILPEDAEAKQQFVRSLGPEARYTRFMTHTNELPAATLARLC
                     NPDYHCEAAWTAKDADSNIVAVVRHSRLNRNECEFGITLAEHMRGSGLAQKMMELIIQ
                     TAAQQGYRTMSADILKTNTPMIKLAEKSGFTLKESDTEKNLYRAYLNLAADKTTEKTN
                     KNLRTDHKIT"
     gene            11558..11803
                     /gene="rpsP"
                     /locus_tag="WIX18_000769"
     CDS             11558..11803
                     /gene="rpsP"
                     /locus_tag="WIX18_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEZ5237911.1"
                     /translation="MVVIRLARGGSKHRPFYNVIVTDSRSRRDGRFIERVGFYNPVAN
                     EKQERVRLNADRLNHWIAQGAQVSDSVAKLIKEQKAA"
     gene            11819..12328
                     /gene="rimM"
                     /locus_tag="WIX18_000770"
     CDS             11819..12328
                     /gene="rimM"
                     /locus_tag="WIX18_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HEZ5237912.1"
                     /translation="MTDTQNRVAMGYIKGVFGIKGWLKIAANTEYSDSLLDYPEWHLV
                     KDGKTVSVTLEAGKVVNSELQVKFEGINDRDLAFSLRGYTIEIPREAFAPTEEDEYYW
                     TDLVGMTVVNKDHTVLGKVSNLMETGANDVLMIDGEHGQILIPFVSQYIETVDTGSKI
                     ITADWGLDY"
     gene            12328..13077
                     /gene="trmD"
                     /locus_tag="WIX18_000771"
     CDS             12328..13077
                     /gene="trmD"
                     /locus_tag="WIX18_000771"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEZ5237913.1"
                     /translation="MLIQAVTIFPEMFDSITRYGVTGRANRQGIWQFEAVNPRKFADN
                     RLGYIDDRPFGGGPGMIMMAPPLHAAIEHAKAQSSQAAKVIYLSPQGKPLTHQKAVEL
                     AELPHLILLCGRYEGIDERLLQSSVDEEISIGDFVVSGGELPAMMLMDAVLRLVPGVL
                     GDMQSAEQDSFSSGILDCPHYTKPLEFQGMAVPEVLRSGNHGLIAEWRLEQSLRRTLE
                     RRPDLLEKRSLIPKESRILNKILQEQREIQS"
     gene            13093..13458
                     /gene="rplS"
                     /locus_tag="WIX18_000772"
     CDS             13093..13458
                     /gene="rplS"
                     /locus_tag="WIX18_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HEZ5237914.1"
                     /translation="MNLIQQLEQEEIARLNKEIPEFAPGDTVVVSVRVVEGTRSRLQA
                     YEGVVIARRNRGLNSNFIVRKISSGEGVERTFQLYSPTVEKIEVKRRGDVRRAKLYYL
                     RGLTGKAARIKEKLPARKG"
     gene            13780..14505
                     /locus_tag="WIX18_000773"
     CDS             13780..14505
                     /locus_tag="WIX18_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010361246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HEZ5237915.1"
                     /translation="MSIIVENLTVSYRRRPAVHHVDITFEEHSMWAVFGPNGAGKSTF
                     LKSLMGLQPIDTGSIRLDGLTRQNIAYLPQQSDIDRSQPMTVFDLAAMGLWYEIGFFR
                     GINAVQKQRVHESLERVGMRQFAGRQIAHLSNGQFQRVLFARMLVQNAKFLLLDEPFN
                     AVDARTTYELLDVLQKCHCGGHAIIAVLHDYEQVRAYFPNTLLLAREKIAAGATETIL
                     TEPYLAQANAKMQQQESPEWCAS"
     gene            14529..15404
                     /locus_tag="WIX18_000774"
     CDS             14529..15404
                     /locus_tag="WIX18_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEZ5237916.1"
                     /translation="MNLYDLLLAPFAEFDFMRYALVSVFCLSLSAAPVGVFLVMRRMS
                     LIGDALSHAVLPGAAVGYMFAGLSLPAMGLGGVAAGMLMALLAGLVSRFTTLKEDANF
                     AAFYLSSLAIGVVLVSKNGSSVDLLHLLFGSVLAVDIPALQLIAAVSSLTLITLAVIY
                     RPLVLESIDPLFLKSVGGKGGLWHVLFLVLVVMNLVSGFQALGTLMSVGLMMLPAITA
                     RLWAKHMGALILLSVLTALLCGLSGLLISYHIEIPSGPAIILCCSVLYLFSVILGKEG
                     GILTKWLKNHRHHTT"
     gene            15481..16395
                     /locus_tag="WIX18_000775"
     CDS             15481..16395
                     /locus_tag="WIX18_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HEZ5237917.1"
                     /translation="MKHPKLTLIAALLTTAATAAPLPVVTSFSILGDVAKQIGGERVS
                     IQSLVGANQDTHAYHMTSGDIKKIRSAKLVLLNGLGLEAADVQRAVKQSKVSYAEATK
                     GIQPLKAEEEGGHHHDHDHDHEGHHHDHGEYDPHVWNDPVLMSAYAQNVAEALIKADP
                     EGKVYYQQRLGNYQMQLKKLHSDAQAAFNAVPAAKRKVLTGHDAFSYMGKRYHIEFIA
                     PQGVSSEAEPSAKQVAAIIRQIKREGIKAVFTENIKDTRMVDRIAKETGVNVSGKLYS
                     DALGNAPADTYIGMYRHNIKALTNAMKQ"
BASE COUNT         4278 a         5271 c         3608 g         3283 t
ORIGIN      
        1 ccgtctgaag ccgattcggt tttcagacga catcattatt tgacctgacg caaacagaaa
       61 gccttccgcg tgcttaaaca catctcttgt agtaaaatat ctaaacagat tcaactggaa
      121 acggtcaggc ttcttcacgc cattcccatt tcaaccgccg cctgccagat tcagacggta
      181 ttcctacttg aaaacaagga gcgttacaat gaaagcagca cgtttttacg ataaaggcga
      241 catccgcatc gaagacatcc ccgaaccgac cgtcgccccc ggcactgtcg gcatcaatgt
      301 cgcctggtgc ggcatctgcg gtactgacct gcacgaattc atggaaggcc cgattttcat
      361 tccgccttgc ggtcatccgc acccgatttc cggcgagtcc gcacccgtaa cgatgggaca
      421 cgagttctcc ggcgtggtct atgccgtcgg cgaaggcgtg gacgacatca aagtcggcca
      481 acacgtcgtg gtcgaaccct acatcatccg cgatgacgta ccgaccggag aaggcagcaa
      541 ctaccacctc tccaaagata tgaactttat cggcttgggc ggctgcggcg gcggtctgtc
      601 cgaaaaaatc gccgtcaaac gtcgttgggt gcatccgatt tccgacaaaa tcccgttgga
      661 tcaagccgct ttgatcgaac cgctgtctgt cggacaccac gcctatgtac gcagcggcgc
      721 gaaagcaggc gacgtcgcat tggtcggcgg cgcaggtccg atcggtttgc tgttggctgc
      781 cgtgttgaaa gccaaaggca tcaaagtcat catcaccgag ttgagtaaag cacgcaaaga
      841 caaagcgcgc gaatccggcg ttgccgacta catcctcgac ccgtccgaag tcgatgttgt
      901 cgaagaggtg aaaaaactga ccaacggcga aggcgtggac gtggcattcg aatgtaccag
      961 cgtgaacaaa gtgttggata ctttggtcga agcctgcaaa cctgccgcca atttggttat
     1021 cgtatccatc tggagccacc ctgcaaccgt caacgtccac agcgtcgtga tgaaagagct
     1081 ggatgtgcgc ggcacgattg cctactgtaa cgaccacgcc gaaaccatca aactggtcga
     1141 agaaggcaaa atcaacctcg aacccttcat cacccagcgc atcaagctgg acgaactggt
     1201 ttccgaaggc ttcgagcgtc tgatccacaa caacgaatcc gccgttaaaa ttattgtgag
     1261 tccaaacctg taagcaaatt acatttgcaa cagcacaaat gccgtctgaa acgctcagac
     1321 ggcattttcc aacgaagcgc aacaggcgta ttgcccgaga gcagccgttt agcctatcat
     1381 tccgaacaaa cagaaacaaa cagaaggaaa atcatgggag attccgtact atccgccatc
     1441 caacaaacca tcacccagcg aaaatctgcc aatccgtccg aatcttacgt cgcacagctc
     1501 ttgcataagg gcgaagacaa aatcctaaaa aaagtgattg aagaggcggg cgaagtgttg
     1561 atggcatcca aagacaaaaa cccgtcccac ctggtttacg aagttgccga cttatggttt
     1621 cacaccatga ttcttctgac acaccacgac ctgaaggcgg aagacgtatt ggacgaactt
     1681 gcgcgccgcc aaggtttgtc gggcttggcc gaaaaagccg ctcgcacaga atcttgaatt
     1741 tatattaaaa tccgcacttt cccacattca atccgtctga ccgcttttca gacggcatcg
     1801 gagccgttat ggacaactgt attttctgca aaatcgccgc caaagacatt ccggcgcaaa
     1861 ccgtctatga agacggcgaa atggtttgtt tcaaagacat caaccccgcc gctccggttc
     1921 atctgctgct gattcccaaa gtccatttcg attcgttggc acacgccgcg cccgaacatc
     1981 agcccctttt gggaaaaatg atgctgaaag ttcccgaaat cgccaaagcg gcaggactgg
     2041 cagacggctt caaaaccctg atcaacaccg gaaaaggcgg cggacaagag gtcttccacc
     2101 tgcatataca catcatgggc acacccgtat aaaccgttat ttcacaatca acccctaata
     2161 cttacttaag gatacatcat gggcagtttt tctctgacgc actggattat cgtactgatt
     2221 atcgtcgttt tgatattcgg caccaaaaaa ctgcgcaacg tcggcaaaga cctcggcggt
     2281 gcggttcatg acttcaaaca ggggctgaac gaaggtacag acggcaaaga agcccaaaaa
     2341 gacgatgtaa tcgaacacaa aaaagacgaa gacaaagcgt aatttatgtt tgatttcggt
     2401 ttgggcgagc tggtttttgt cggcattatc gccctgattg tcctcggccc cgaacgcctg
     2461 cccgaggccg cccgcaccgc cggacggctc atcggcaggc tgcaacgctt tgtcggcagc
     2521 gtcaaacagg aatttgacac tcaaatcgaa ctggaagaac taaggaaggc aaagcaggaa
     2581 tttgaagctg ccgccgctca ggttcgagac agcctcaaag aaaccggtac ggatatgcag
     2641 aacagtctgc acgacatttc cgacggtctg aagccttggg aaaaactgcc cgaacagcgt
     2701 acgcctgctg atttcggtgt cgatgaaaac ggcaatccct ttcccgatgc ggcaaacacc
     2761 ctatcagacg gcatttccga cgttatgccg tccgaacgtt cctacacttc cgccgaaatc
     2821 cttggggaca gcgggcaaac cggcagtaca gccgaacccg cggaaaccga ccaagaccgc
     2881 gcatggcggg aatacctgac tgcttctgcc gccgcacccg tcgtacagac cgtcgaagtc
     2941 agctatatcg ataccgctgt tgaaacccct gttccgcata ccacttcgct gcgtaaacag
     3001 gcaataagcc gcaaacgcga tttgcgtccc aaatcccgcg ccaaacctaa attgcgcgtc
     3061 cgtaaatcat aaagagagca atccggtgtc cgaaacacaa aacgaacaac ccgtccaacc
     3121 gcttgtcgag catctcatcg agctgcgccg ccgcctgatg tggacggttg tcggcatctt
     3181 agtctgcttt ttcggcctaa tgccgtttgc ccaacaactc tatactttta tcgccgaccc
     3241 gctgatggca aacctgccca aagacaccag catgattgcc accgatgtca tcgcaccatt
     3301 tttcgtgccg gtcaaagtta ccctgatggc ggcattttta atttcgctgc cgcatacgct
     3361 ctaccaaatc tgggcatttg tcgcgcccgc actctatcaa aacgaaaaac gcctgattac
     3421 cccgcttgtc ctctcaagcg tcagcctgtt tttcatcggc atggcatttg cctactttct
     3481 ggtttttccc gtcattttca aattccttgc cagcgttacc cctgtcggtg tcaatatggc
     3541 gacagacatc gacaaatacc tatcttttat cttaggcatg tttgttgcgt tcggcacaac
     3601 gtttgaagtt cccattgtcg ttatcctgtt aaccaaaatc agcgtggtaa caaccggaca
     3661 gctcaaacgc gcccgcccct atgtgattgt cggcgcgttt gtcattgccg ccatcatcac
     3721 gccgcccgat gtgatttcac aaaccctgct tgccattccg ctgattctct tatacgaagc
     3781 aggtatttgg ttcggacgct ttttcacgcc acgttcagaa caggatggcg acatacagcc
     3841 gcctgcaaca acctgacact atgccgtccg aacctccgcc tcataccgca acagattaag
     3901 gaataccttt gaataccctc tatttaggtt caaacagccc gcgccgaatg gaaatcctga
     3961 cacagttggg ctatcaggtc gtcaagctgc ctgccgacat caatgaaacg gtcagacaga
     4021 acgaagaccc tgcccgttac gttcaaagga tggcagaaga aaaaaaccga accgccctga
     4081 ccctcttttg cgaaaccaac ggcacaatgc ccgatttccc cctgattacc gccgacacct
     4141 gcgtcgtttc agacggcatc atattgggca aaccccgctc ccaagctgaa gcaatcgaat
     4201 ttttaaaccg attgtccggc aaacaacata ccgtcctgac tgctgtctgc attcattatc
     4261 gcggcaaaac gtcaagccgc gtccaaacca accgcgtcgt tttcaagccc ctgagttcgg
     4321 aagaaatttc cgcctatgtg caaagcggcg aaccgatgga caaagccggc gcctacgccg
     4381 tacaaggcat aggcggcatc tttatccaat ctatcgaagg cagcttcagc ggcattatgg
     4441 gactgcccgt ttatgaaacc gtttcgatgt tgcaggattt gggataccgc tcccccttgt
     4501 ccgcccttaa accgtaaaga ccgccgtgaa cagacaaacc gcttacctcc ttacctcttt
     4561 cagcctgatc gcactgataa tcctgtccct ttcctgggaa ctgtggattg caccgttgcg
     4621 cccgggcggc tcgtggctcg cgctcaaagc cctccccctc tgtctgccgc tttcaggtat
     4681 cttgaaaaag aaaatctata cctaccaata cagctccatg ctggttctga tttattttgc
     4741 cgaagccgtt atgcgcctgt tcgacgccta tccagcagaa cagatttgcg ccgcgctttc
     4801 cgcagtattc agcatcatct tcttcatatc ctgcctgtcg ttcgtcaaac aatacaagga
     4861 aacaaacaat gcccgctgaa acgaccgtat ccggcgcgca ccccgccgcc aaactgccga
     4921 tttacatcct gccctgcttc ctttggatag gcatcatccc ctttaccttc gcgctcaggc
     4981 agcaaccgtc gcccgacttt taccacgatg ccgccgccgc agccggcctg attgtcctgt
     5041 tgttcctcac ggcaggaaaa aaactgtttg atgtcaaaat ccccgccatc agcttccttc
     5101 tgtttgcaat ggcggcgttt tggtatcttc aggcacgcct gatgaacctg atttaccccg
     5161 gtatgaacga catcgtctct tggattttca tcttgctcgc cgtcagcgcg tgggcctgcc
     5221 ggagcttggt cgcacacttc ggacaagaac gcatcgtgac cctgtttgcc tggtcgctgc
     5281 ttatcggctc cctgcttcaa tcctgcatcg tcgtcatcca gtttgccggc tgggaagaca
     5341 cccctctgtt tcaaaacatc atcgtttaca gcgggcaagg cgtaatcgga cacatcgggc
     5401 agcgcaacaa cctcggacac tacctcatgt ggggcatact cgcctccgcc tacctcaacg
     5461 gacaacgaaa aatccccgcc gccctcggcg taatctgcct gattatgcag accgccgttt
     5521 taggtttggt caactcgcgc accatcttga cctacatagc cgccatcgcc ctcatccttc
     5581 ccttctggta tttccgttcg gacaaatcca acaggcggac gatgctcggc atagccgcag
     5641 ccgtattcct taccgcgctg ttccaatttt ccatgaacac cattctggaa acctttactg
     5701 gcatccgcta cgaaactgcc gtcgaacgcg tcgccaacgg cggtttcaca gacttgccgc
     5761 gccaaatcga atggaataaa gcccttgccg ccttccagtc cgccccgata ttcgggcacg
     5821 gctggaacag ttttgcccaa caaaccttcc tcatcaatgc cgaacagcac aacatatacg
     5881 acaacctcct cagcaacttg ttcacccatt cccacaacat cgtcctccaa ctccttgcag
     5941 agatgggaat cagcggcacg cttctggttg ccgcaaccct gctgacgggc attgccgggc
     6001 tgcttaaacg ccccctgacc cccgcatcgc ttttcctaat ctgcacgctt gccgtcagta
     6061 tgtgccacag tatgctcgaa tatcctttgt ggtatgtcta tttcctcatc cctttcggac
     6121 tgatgctctt cctgtccccc gcagaggctt cagacggcat cgccttcaaa aaagccgcca
     6181 atctcggcat actgaccgcc tccgccgcca tattcgcagg attgctgcac ttggactgga
     6241 catacacccg gctggttaac gccttttccc ccgccactga cgacagtgcc aaaaccctca
     6301 accggaaaat caacgagttg cgctatattt ccgcaaacag tccgatgctg tccttttatg
     6361 ccgacttctc cctcgtaaac ttcgccctgc cggaataccc cgaaacccag acttgggcgg
     6421 aagaagcaac cctcaaatca ctaaaatacc gcccccactc cgccacctac cgcatcgccc
     6481 tctacctgat gcggcaaggc aaagttgcag aagcaaaaca atggatgcgg gcgacacagt
     6541 cctattaccc ctacctgatg ccccgatacg ccgacgaaat ccgcaaactg cccgtatggg
     6601 caccgctgct acccgaactg ctcaaagact gcaaagcctt cgccgccgcg cccggtcatc
     6661 cggaagcaaa accctgcaaa tgacccgcgc cggcggatac ggataccgcc cgaaatgtaa
     6721 agctccatgc aagacattgc aaaaaacagc aaaccggtag ggaaatacgc tatcaaaaaa
     6781 cattgcagcc gtgttaagat aaaccgtcaa acaatctttt cacgccccgc ccgaaacagg
     6841 gtcggggcat acccttacga aaaggaaaca ccatgagccg cgtattactc gtagatgacg
     6901 atgccctgct gaccgaactg ctgaccgaat acctgagcgc cgaaggtctg aacgtccgca
     6961 gcgttcccga cggggaagca ggcgtacagg aaatcctgag cgggcagtac gatgtagtcg
     7021 tattggattc catgatgccc aaaatgaacg gcttggatgt cttgaaaaac gtacgcgccc
     7081 gaagcaccgt ccccatcatc atgctgaccg ccaaaggcga cgacatcgac cgaatcatcg
     7141 gcttggaaat gggcgcggac gactatgtcc ccaaaccctg cacaccacgc gaactcttgg
     7201 cacgcatcaa tgccatcctg cgccgcgcac aacacagcgg cgaacagaac aacgcaccca
     7261 acagcatctc cgtcagcgat gtcgtcctgt accccgccaa acgccaggca tccgtcaaag
     7321 acatgccgct cgaactgacc agcaccgaat tcaacctgct cgaagtcctg atgcgccatg
     7381 ccggacaggt agtcagcaaa gaaaccctgt ccgtcgaagc actcgaccgc aagctggcaa
     7441 aattcgaccg cagtatcgac gtacacatct ccagcatccg ccacaagttg ggcgatgcct
     7501 ctctgattca aaccgtacgc ggcttgggct acctgtttgt caaaaactga agcaacgggc
     7561 aaatgaaact gttccaacgc attttcgcca cattttgcgc agttatcgtc tgtgcaatct
     7621 ttgtggcgag tttttctttt tggctggtgc agaacaccct tgccgaaaac cagttcaacc
     7681 aacgccgcac catcgaaacc actttgatgg gcagcatcat ttccgcattc cgggcacgcg
     7741 gggacgcggg cgcgcgcgaa atcctgacgg aatggaaaga cagccccgtc tcatcgggcg
     7801 tgtacgttat acagggcgac gagaaaaaag atatcctgaa ccggtatatc gacagctaca
     7861 ccatcgaacg cgcccggctt ttcgccgccg gacacccgca ttccaacctc gtccatatcg
     7921 aatacgaccg cttcggcgaa gaatacctgt tcttcaccaa agactgggac aaactccaag
     7981 cccgccgcct gcccagcccc ctgttgatcc ccggcctgcc gctcgccccg atttggcacg
     8041 aactcatcat attgtccttc atcatcgtcg tcggactgct gatggcgtac atcctcgccg
     8101 gcaatatcgc caaacccatc agaatcttag gcaacggcat ggacagggtg gcaaacggag
     8161 aacttgaaac ccgtatctcc caacaggtcg acgaccgcga cgacgaattg tcccatcttg
     8221 ccatccaatt cgacaaaatg gtggaaaaac tcgaaaaact cgttgccaaa gaacgccacc
     8281 tgctccacca cgtttcccac gaaatgcgct ccccgcttgc ccgtatgcag gcgattgtcg
     8341 gactgattca ggcgcagccc caaaaacagg aacaatatct caaacggctg gaaggcgaac
     8401 tgacccgcat ggatacgctg gccggggaac tgttaaccct gtcccgtctc gaaacttcca
     8461 atatggcttt ggaaaaagaa agcctgaaac tcctgccctt cttgggcaac ctggtagaag
     8521 acaatcaaag cattgcccag aaaaacggac aaacggttac cctgtctgcc gacggaaaaa
     8581 tccccgaaaa cacaaccatc cttgccaacg aaagctacct gtaccgcgcc ttcgacaacg
     8641 tcatccgcaa cgccgtcaac tacagtcccg aaggcagcac catcctgatc aacatcggac
     8701 aagaccacaa acactggata atcgacgtta ccgacaacgg ccccggcgtg gacgaaatgc
     8761 agctcccgca catcttcacc gctttctacc gtgcagactc cagtgccaac aaacccggaa
     8821 caggactggg gcttgcattg acccaacata ttattgaaca gcactgcggc aaaatcatcg
     8881 ccgaaaacat caaaccgaac gggctgcgga tgcgcttcat cctacccaag aaaaaaaccg
     8941 gttccaaaac agaaaaaagt gcgaactgac cataatgccg tctgaaccgg cttcagacgg
     9001 cattgcacaa acagttaccc caaaacaaac acacagcggg tgcatctcca aaaatcacgc
     9061 acataccgtc cgcaaaggaa tatatcatgt cggcacaaac cgatcccggc tacttcttca
     9121 tgcccaacca cattatcctg ataggcgcga gcgaacgtcc gtacagcctg ggcgaacgcg
     9181 tactcagcaa cctgctgagt acgccctttc aaggaaaaat cacccccgta aacccgcgcc
     9241 accacaccat agccgggctt cccgcctaca ccagcctcaa caaaatcccc ggcaatgcag
     9301 acctgattat tgccgttacc ctacccgaca gttacgacac cctcttcaaa acctgccgca
     9361 aaaagcagct ccgacacatc atcctcatac aggactggga cagcctgtct gccgcagaac
     9421 tgcacaccgc cgaaactgcc atccgcaaac accacggcaa cggactcaac atcaccgcct
     9481 gcaccaccgc aggcatccaa ctgccctcac tcggacttaa catcagtacc caagacggat
     9541 acgccgcagg ccataccgcc atactgaccg gcaatgccgc cgtcagccgc caaatcgaca
     9601 acatcctgaa caaactccgt caaggcacat cccgccacat cagcctgcat cccggcatca
     9661 gccccatcac atccgccgat tggctcaacc gcttcggaca cagcctgcac accaaaaccg
     9721 ccgtcctaca ccacaaccct gaagagaatc agcgcaaact gttcagcgca atccgccaat
     9781 ttacccgcca tacgccgctg attctccaca tcacctgccg cacgacagaa accgaccgtg
     9841 ccgtactgca ctgcctcgcc cgacactgca acttcctcat cagtttcaac gccgacgacc
     9901 tcgaagccgc actgcgcgcc caactgtccg accttccacc cctgtcccga ctcgacatcc
     9961 tgtccgacac gcctgccgaa tggctgaacg cgcacgcgcc aaaaaccctc gccctccact
    10021 ttcccaacct tccccaccac atccgcaacg gacacctgac cggcacaccc acaccctcaa
    10081 tctgccacga catcgcctca cgtcagcttg cccgccccga cacccaagcc gtcctgacca
    10141 tcctcagccc ctccggacac gaggattaca aaaaaacagc acgcgccctt atccgcctgt
    10201 ccgaacagag cgccaaaccc ctgctcgtca gcagcccctt ttcagacggc ataacacatt
    10261 tcgacacccc cactcaggca atccgcaccc tttcctaccg caacaccgcc gccgccctga
    10321 aacaggcaca gctcgacatt gcaccgccgc agccatgccg tctgaaaaca ccgcaacccc
    10381 aaaacatcaa aaaagccctc gaagccgccg accccgccct aatcgccgaa gccctgcacc
    10441 tcccccccta ccggcacacc acccataacg ccgtccaatt ccaattcggc agccactccc
    10501 tctatggcga catcctgacc gcacgttgca acggacaaac cactgccgta ctcccgccgt
    10561 ttaccacgct cgacagccgc caccttgccc gctttgccga actcgacggc acacaaaccc
    10621 tcgaccagtt cctgcacaca ctgaccatca ttcccgaata ccgccaacac attctcggca
    10681 tcaccctcaa cctaaacggc ggacaataca gcagcgattt catcttaaag acacccgaaa
    10741 cacacgacac gcccaaacgc aagaacacag gcaaagccgc ccaaaccctc gaacatgccg
    10801 ccgcaaaaat gcagagtgcc gccgcatacc tgaaacacaa aaacccgaca gccgccgaat
    10861 ttctccgcca cacaagcgaa gccgccgcag aactgctcgg cagcaaaacc gaaaccggag
    10921 cagccgtacc caacgtactt gccccctatc ccgcagcata ccccaaaaca ctgtccctaa
    10981 gaaacaacac gaccgttacc attaccccca ttttgcccga agacgcagaa gccaaacagc
    11041 agttcgtccg cagcctcggt cccgaagcac ggtacacacg cttcatgacc cacaccaacg
    11101 aactgcccgc agccacgttg gcacgcctgt gcaaccccga ttaccactgt gaagccgcat
    11161 ggacggcaaa ggatgccgac agcaacatcg tcgccgtcgt ccgccacagc cgcctgaacc
    11221 gcaacgaatg cgaattcggc atcacactgg cggaacatat gcgcggcagc ggactggcac
    11281 agaaaatgat ggaactcatc atccaaaccg ccgcacagca aggctaccgg actatgagtg
    11341 ccgacattct caaaaccaat acccccatga tcaaacttgc tgaaaaatca ggatttaccc
    11401 tcaaggaatc ggacaccgaa aaaaacctgt accgcgcata tctgaacctt gcggcagaca
    11461 aaacaacaga aaaaacaaat aaaaacttgc gcaccgacca caaaataacc taaaatcggc
    11521 agtttccata tatccgattt tctcaaaagg actcaaaatg gtagttatcc gtttggcacg
    11581 cggcggctcg aaacaccgcc ccttctacaa cgtcatcgtt actgactcac gcagccgccg
    11641 cgacggccgc ttcatcgaac gcgtaggctt ctacaacccc gtagccaacg aaaaacaaga
    11701 gcgcgtccgc ctcaatgcag accgcctgaa ccactggatt gcacaaggcg cgcaagtcag
    11761 cgactccgtt gcaaaactga ttaaagaaca aaaagccgcc taattcacat ttgccgccat
    11821 gacagacact caaaaccggg tagccatggg ctacatcaaa ggcgtattcg gcataaaagg
    11881 ctggttgaaa attgccgcca acaccgaata ttccgacagc cttttggact accccgagtg
    11941 gcatttggtc aaggacggca aaaccgtcag cgttaccctt gaagccggaa aagtcgtcaa
    12001 cagcgaactc caagtcaaat tcgaaggcat aaacgaccgc gacttggcat tctcattgcg
    12061 cggttacacc atcgaaatac cccgtgaagc attcgccccg acagaagaag acgaatacta
    12121 ctggacagac ttggtcggca tgaccgtcgt caacaaagac cataccgttt taggcaaggt
    12181 aagcaacctg atggaaaccg gcgcaaacga cgtattgatg attgacggag aacacgggca
    12241 gattctgatt ccgttcgttt cccaatatat cgaaaccgtc gataccggca gcaagattat
    12301 tactgccgac tggggtttgg actactgatg cttatccagg cagttaccat tttccccgaa
    12361 atgttcgaca gcattacccg ctacggcgta acgggacgcg cgaacagaca gggaatctgg
    12421 cagtttgaag cagtcaatcc ccgaaagttt gccgacaaca gattgggcta catcgacgac
    12481 cgcccgttcg gcggcggccc gggaatgatt atgatggctc cgccgcttca tgcagcaata
    12541 gaacacgcca aagcacaatc ctcccaagct gcaaaagtca tctacctcag cccccaaggg
    12601 aaaccgctga cacaccaaaa agcggtagaa ctggcagaac ttccgcatct gattctgctg
    12661 tgcggacggt atgagggcat agacgaaagg cttctgcaaa gcagcgtcga tgaagaaatc
    12721 agcatcggag acttcgttgt ttccggcgga gagcttcccg ccatgatgct gatggatgcg
    12781 gtattgaggc tcgtacccgg cgtattgggc gatatgcagt ctgccgaaca agattcgttc
    12841 tcaagcggca ttttggactg cccccactac accaaaccct tagaatttca aggcatggct
    12901 gttccggaag tattacgttc cggcaatcat ggcttgatag cggaatggcg gttggaacaa
    12961 tcgctgcgcc gcaccttgga gcgcagaccc gatcttttgg aaaagcgcag tttaatccca
    13021 aaggaatccc gcatcttgaa taaaatccta caagagcaac gggaaatcca atcataattt
    13081 aggaaaaaaa caatgaacct gattcaacag ctcgagcaag aagaaattgc ccgcctgaac
    13141 aaagaaatcc ccgaattcgc accgggcgac accgtagtcg tatccgtacg cgtcgtggaa
    13201 ggtacccgca gccgtctgca agcctacgaa ggcgttgtca ttgcacgccg caaccgtggt
    13261 ctgaacagca acttcatcgt ccgtaaaatt tccagcggcg aaggtgttga acgtactttc
    13321 caactgtact ctccgaccgt cgaaaaaatc gaagtcaaac gccgtggcga cgtacgccgt
    13381 gccaaactgt actacctgcg cggtctgacc ggcaaagctg cacgcatcaa agaaaaactg
    13441 cctgcacgca aaggttgatt caaacccgtt ttccccaatg ccgtctgaac cttctgacgg
    13501 catttcttat tgccgcaaca tccgcaacgg aacagcacca agaagcacac cccttccggc
    13561 acatcccgaa tccccgtccg aaccgaacaa aatttacaga ccaaacgtta tacagtatca
    13621 tatcagccat ataataataa ccgctttacc gccttccctt tcaaaaccgc aaatcatcat
    13681 gacaccttcc cttttactat caggattgac cttccgcctc gtccttgccc tgattgccgt
    13741 atccctttta tggggcgttt acttttgggc agtatccgca tgagcatcat tgtcgaaaac
    13801 ctgaccgtca gctaccgccg ccgacctgcc gtgcaccatg tggacattac ttttgaagaa
    13861 catagtatgt gggcggtttt cggtcccaac ggcgcaggga aatccacctt tctcaaatcc
    13921 ttaatgggat tgcagcctat cgatacgggc agcatccggc tggacggatt gacccgtcag
    13981 aacattgcct accttcccca gcagtccgac atcgaccgct cgcagcccat gaccgttttc
    14041 gacttggcgg caatggggct atggtatgaa atcggttttt tcagaggaat aaatgccgtt
    14101 caaaaacaac gcgttcacga atctttggaa cgcgtcggga tgcggcagtt tgccggccgc
    14161 caaatcgccc acctctcaaa cggacaattc cagcgtgtcc tttttgcccg aatgctggtt
    14221 caaaacgcca aattcctact tctagacgaa cctttcaacg ctgttgatgc acggacgacc
    14281 tacgaacttc tcgacgtatt gcagaaatgc cattgcggcg gacacgccat catcgccgta
    14341 ctgcacgatt acgaacaagt ccgtgcctac tttcccaata ccctgctgct cgcccgcgaa
    14401 aaaattgcgg caggcgcaac cgagaccatt ctgacagaac cctacctcgc ccaagccaac
    14461 gccaaaatgc agcaacagga aagccccgag tggtgcgcgt cataaatgcc gtctgaaacc
    14521 gaaaaaccat gaacctctac gacctgctcc ttgccccctt tgcagaattt gactttatgc
    14581 gctacgccct cgtatccgtc ttctgcctgt ccctcagtgc cgcacccgtc ggcgtattcc
    14641 tcgtcatgcg ccgtatgagc ctgataggcg acgcattgag ccacgccgtc ttgcccggtg
    14701 ctgccgtcgg ctacatgttt gccggcttaa gcctgcccgc catgggtttg ggcggcgtag
    14761 ccgcaggtat gctgatggca ctgcttgccg gactcgtcag ccgcttcacc accctgaaag
    14821 aagatgccaa ctttgccgcc ttttatctca gcagcctcgc catcggcgta gtcctcgtca
    14881 gcaaaaacgg gagcagcgtc gatttgctcc acctcctttt cggctctgta cttgccgtcg
    14941 atattcctgc cctgcagctc atcgccgccg tctccagcct cacgctcatt acccttgccg
    15001 tcatctaccg cccgctcgta ctcgaaagca tcgaccccct gtttctcaaa tctgtcggcg
    15061 gcaaaggcgg gctttggcac gtcctctttc tcgtcctggt cgtcatgaac ctcgtatccg
    15121 gctttcaagc cctcggcaca ctcatgtccg tcggacttat gatgctgcca gccattaccg
    15181 cccgcctatg ggcgaagcac atgggcgcac tcatcctcct atccgttctg acagccctgc
    15241 tgtgcggctt gagcggactg ctcatttcct accacatcga aattccttcc ggtcccgcca
    15301 tcatcctctg ttgcagcgtc ctttatctct tttccgtcat actcggcaaa gaaggcggca
    15361 ttctgaccaa atggctcaaa aaccaccgcc accacaccac ctgaccccgc aagccgcttg
    15421 aacaaacagg cggcttgttt taccataaca gatgttacgt tatatcacag gagaacaatt
    15481 atgaaacacc ccaaactcac ccttatcgcc gcattgctga ccactgccgc aactgccgcc
    15541 cccctgccgg ttgtaaccag cttcagcatt ttaggcgacg tagccaaaca aatcggcgga
    15601 gagcgcgtat ccatacaaag tttggtcgga gccaaccaag atacgcacgc ctatcatatg
    15661 accagtggcg acattaaaaa aatccgcagt gcaaaactcg tcctgctcaa cggcttagga
    15721 cttgaagctg ccgatgtaca acgtgccgtc aaacagagca aagtatccta tgccgaagcg
    15781 accaaaggca tccaacccct caaagccgaa gaagaaggcg gacaccatca cgaccacgat
    15841 catgaccacg aaggacacca ccatgaccac ggcgaatatg acccccacgt ctggaacgac
    15901 cccgtcctta tgtccgccta tgcccaaaac gttgccgaag ccctgataaa ggccgatccc
    15961 gaaggcaaag tttattatca acaacgcttg ggcaactacc aaatgcagct taaaaaactg
    16021 cacagcgacg cacaagccgc atttaacgcc gtccctgccg ccaaacgcaa agtcctgacc
    16081 gggcacgatg ccttttccta tatgggcaaa cgttaccata tcgaattcat cgccccgcaa
    16141 ggcgtgagca gcgaagccga gccttcagcc aaacaagtcg ccgccatcat ccgccaaatc
    16201 aaacgcgaag gcatcaaagc cgtatttacc gaaaacatca aagacacccg catggttgac
    16261 cgtatcgcca aagaaaccgg tgtcaacgtc agcggcaaac tgtattccga cgcactcggc
    16321 aacgcgcccg cagacaccta catcggaatg taccgccaca acatcaaagc cttgaccaac
    16381 gcgatgaagc aataaaaccg tttgattggt ttgaatttga aaaggcaaaa ggccgtctga
//
LOCUS       DAWITQ010000029        16373 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.029, whole genome shotgun sequence.
ACCESSION   DAWITQ010000029 DAWITQ010000000
VERSION     DAWITQ010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16373)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16373)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16373
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.029"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(86..2191)
                     /gene="fusA"
                     /locus_tag="WIX18_000776"
     CDS             complement(86..2191)
                     /gene="fusA"
                     /locus_tag="WIX18_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEZ5237918.1"
                     /translation="MARKTPISLYRNIGISAHIDAGKTTTTERILFYTGLTHKLGEVH
                     DGAATTDYMEQEQERGITITSAAVTSYWSGMAKQFPEHRFNIIDTPGHVDFTVEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYQVPRLAFVNKMDRQGANFFRVVEQMKT
                     RLRANPVPIVIPVGAEDNFSGVVDLLKMKSIIWNEADKGTTFTYGDIPAELVETAEEW
                     RQNMIEAAAEASEELMDKYLGGDELTEEEIVGALRQRTLAGEIQPMLCGSAFKNKGVQ
                     RMLDAVVELLPAPTDIPPVQGVNPNTEEADSRQASDEEKFSALAFKMLNDKYVGQLTF
                     IRVYSGVVKSGDTVLNSVKGTRERIGRLVQMTAADRTEIEEVRAGDIAAAIGLKDVTT
                     GETLCAESAPIILERMEFPEPVIHIAVEPKTKADQEKMGIALNRLAKEDPSFRVRTDE
                     ESGQTIISGMGELHLEIIVDRMKREFGVEANIGAPQVAYRETIRKAVKAEYKHAKQSG
                     GKGQYGHVVIEMEPMEPGGEGYEFIDEIKGGVIPREFIPSVDKGIRDTLPNGIVAGYP
                     VVDVRIRLVFGSYHDVDSSQLAFELAASQAFKEGMRQASPALLEPIMAVEVETPEEYM
                     GDVMGDLNRRRGVVLGMDDDGIGGKKVRAEVPLAEMFGYSTDLRSATQGRATYSMEFK
                     KYSEAPAHIAAAVTEARKG"
     gene            complement(2210..2680)
                     /gene="rpsG"
                     /locus_tag="WIX18_000777"
     CDS             complement(2210..2680)
                     /gene="rpsG"
                     /locus_tag="WIX18_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEZ5237919.1"
                     /translation="MPRRREVPKRDVLPDPKFGSVELTKFMNVLMIDGKKSVAERIVY
                     GALEQIEKKTGKVAIEVFNEAIANAKPIVEVKSRRVGGANYQVPVEVRPSRRLALAMR
                     WVRDAARKRGEKSMDLRLAGELIDASEGRGGALKKREEVHRMAEANKAFSHFRF"
     gene            complement(2798..3169)
                     /gene="rpsL"
                     /locus_tag="WIX18_000778"
     CDS             complement(2798..3169)
                     /gene="rpsL"
                     /locus_tag="WIX18_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005306278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEZ5237920.1"
                     /translation="MPTINQLVRKGRQKPVYVNKVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSL
                     DTAGVKDRKQARSKYGAKRPK"
     gene            complement(3348..3497)
                     /locus_tag="WIX18_000779"
     CDS             complement(3348..3497)
                     /locus_tag="WIX18_000779"
                     /inference="COORDINATES: protein motif:HMM:NF016462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ5237921.1"
                     /translation="MSAALWHKKLSWKGFTPQINFRYNKINSNMPAFYSRSGKERFVS
                     IEKTY"
     gene            complement(3494..3751)
                     /locus_tag="WIX18_000780"
     CDS             complement(3494..3751)
                     /locus_tag="WIX18_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237922.1"
                     /translation="MKPRNLFFAGCLLTSATFAEDIGVPVELINVGNRIAMPSEGESL
                     ALLPFAEDVPPVRDAMPSEVPKSAAGGDVRGDRIGMPINIG"
     gene            complement(4043..8218)
                     /gene="rpoC"
                     /locus_tag="WIX18_000781"
     CDS             complement(4043..8218)
                     /gene="rpoC"
                     /locus_tag="WIX18_000781"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEZ5237923.1"
                     /translation="MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPE
                     TINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRE
                     RMGHIELAAPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQ
                     LLTEDDYYNKLDEYGDDFDAKMGAEGIRELLRTLNVAGEIEILRQELESTGSDTKIKK
                     IAKRLKVLEAFHRSGMKLEWMIMDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVIN
                     RNNRLKRLLELHAPDIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIK
                     GKGGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIFHKLEKQGL
                     ASTVKAAKKLVEQEVPEVWDILEEVIREHPIMLNRAPTLHRLGIQAFEPILIEGKAIQ
                     LHPLVCAAFNADFDGDQMAVHVPLSLEAQMEARTLMLASNNVLSPANGEPIIVPSQDI
                     VLGLYYMTRDRINAKGEGSLFADVKEVHRAYHTKQVELGTKITVRLREWVKNEAGEFE
                     PVVNRYETTVGRALLSEILPKGLPFEYVNKALKKKEISKLINASFRLCGLRDTVIFAD
                     HLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEANAEVKEIEDQYRQGLVTNGERYN
                     KVVDIWGRAGDKIAKAMMDNLSKQKVIDRAGNEVDQESFNSIYMMADSGARGSAAQIK
                     QLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHGARKGLADTALKTANSGYL
                     TRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDRILGRVTASDVVDPSSG
                     ETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHCYGRDLARGKLVNAG
                     EAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTARFSSQMRYVANN
                     KGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGMAIKAGQTLATWDPHTRPM
                     ITEHAGMVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSSSASKLLRPTVKLLDEN
                     GVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITGGLPRVA
                     ELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIVTDVDGVAYETLISKEKQILVHDG
                     QVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVIIRQ
                     MLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGKEPARYENVLLGITKASLSTD
                     SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQWQE
                     VEQETAETQVTDE"
     gene            complement(8375..12553)
                     /gene="rpoB"
                     /locus_tag="WIX18_000782"
     CDS             complement(8375..12553)
                     /gene="rpoB"
                     /locus_tag="WIX18_000782"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEZ5237924.1"
                     /translation="MNYSFTEKKRIRKSFAKRENVLEVPFLLATQIDSYAKFLQLENA
                     FDKRTDDGLQAAFNSIFPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAAPLRA
                     RIRLVILDKEASKPTVKEVRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVF
                     FEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALG
                     YGNEQILDIFYDKETFYLSSNGVQTDLVAGRLKGETAKVDILDKEGNVLVAKGKRITA
                     KNIRDITNAGLTRLDVEPESLLGKALAADLIDSETGEVLASANDEITEELLAKFDING
                     VKEITTLYINELDQGAYISNTLRTDETAGRQAARVAIYRMMRPGEPPTEEAVEQLFNR
                     LFFSEDSYDLSRVGRMKFNTRTYEQKLSEAQQNSWYGRLLNETFAGAAEKGGYVLSVE
                     DIVASIATLVELRNGHGEVDDIDHLGNRRVRSVGELTENQFRSGLARVERAVKERLNQ
                     AESENLMPHDLINAKPVSAAIKEFFGSSQLSQFMDQTNPLSEVTHKRRVSALGPGGLT
                     RERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYARTNDYGFLETPYRRVIDG
                     KVTKEIDYLSAIEEGRYVIAQANADLDSDGNLIGDLVTCREKGETIMATPDRVQYMDV
                     ATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPMVGTGIERSVAVDSA
                     TAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIYNLVKFTRSNQSTNINQRPAV
                     KAGDVLQRGDLVADGASTDLGELALGQNMTIAFMPWNGYNYEDSILISEKVAADDRYT
                     SIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVYIGAEVEAGDVLVGKV
                     TPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQVFTREGIQRDKRA
                     QSIIDSELKRYRLDLNDQLRIFDNDAFDRIERMIVGQKANGGPMKLAKGSEITTEYLA
                     GLPSRHDWFDIRLTDEDLAKQLELIKVSLQQKREEADELYEIKKKKLTQGDELQPGVQ
                     KMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLNPLGVPS
                     RMNIGQILEVHLGWAAKGIGERIDRMLKEQRKAGELREFLNRLYNGSGKKEDLDALTD
                     EEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSDDPEVEKLGFNDSKTQITL
                     YDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRF
                     GEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGMPESFNVLVK
                     EIRSLGLDIDLERY"
     gene            complement(12743..13114)
                     /gene="rplL"
                     /locus_tag="WIX18_000783"
     CDS             complement(12743..13114)
                     /gene="rplL"
                     /locus_tag="WIX18_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HEZ5237925.1"
                     /translation="MAITKEDILEAVGSLTVMELNDLVKAFEEKFGVSAAAVAVAGPA
                     GAGAADAEEKTEFDVVLASAGDQKVGVIKVVRAITGLGLKEAKDIVDGAPKTIKEGVS
                     KAEAEDIQKQLEEAGAKVEIK"
     gene            complement(13172..13672)
                     /gene="rplJ"
                     /locus_tag="WIX18_000784"
     CDS             complement(13172..13672)
                     /gene="rplJ"
                     /locus_tag="WIX18_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HEZ5237926.1"
                     /translation="MSLNIETKKVAVEEISAAIANAQTLVVAEYRGISVSSMTELRAN
                     ARKEGVYLRVLKNTLARRAVQGTSFAELADQMVGPLVYAASEDAVAAAKVLHQFAKKD
                     DKIVVKAGSYNGEVMNAAQVAELASIPSREELLSKLLFVMQAPVSGFARGLAALAEKK
                     AGEEAA"
     gene            complement(13902..14597)
                     /gene="rplA"
                     /locus_tag="WIX18_000785"
     CDS             complement(13902..14597)
                     /gene="rplA"
                     /locus_tag="WIX18_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HEZ5237927.1"
                     /translation="MAKVSKRLKALRSSVEANKLYAIDEAIALVKKAATAKFDESVDV
                     SFNLGVDPRKSDQVIRGSVVLPKGTGKITRVAVFTQGANAEAAKEAGADIVGFEDLAA
                     EIKAGNLNFDVVIASPDAMRIVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQ
                     VQYRTDKAGIVHATIGRASFAEADLKENFDALLDAIVKAKPAAAKGQYLKKVAVSSTM
                     GLGIRVDTSSVNN"
     gene            complement(14597..15031)
                     /gene="rplK"
                     /locus_tag="WIX18_000786"
     CDS             complement(14597..15031)
                     /gene="rplK"
                     /locus_tag="WIX18_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HEZ5237928.1"
                     /translation="MAKKIIGYIKLQIPAGKANPSPPVGPALGQRGLNIMEFCKAFNA
                     ATQGMEPGLPIPVVITAFADKSFTFVMKTPPASILLKKAAGLQKGSSNPLTNKVGKLT
                     RAQLEEIAKTKDPDLTAADLDAAVRTIAGSARSMGLDVEGVV"
     gene            complement(15132..15668)
                     /gene="nusG"
                     /locus_tag="WIX18_000787"
     CDS             complement(15132..15668)
                     /gene="nusG"
                     /locus_tag="WIX18_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HEZ5237929.1"
                     /translation="MSKKWYVVQAYSGFEKNVQRILEERIAREEMGDYFGQILVPVEK
                     VVDIRNGRKTISERKSYPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRANRPTPISQR
                     EAEIILQQVQTGIEKPKPKVEFEVGQQVRVNEGPFADFNGVVEEVNYERNKLRVSVQI
                     FGRETPVELEFSQVEKIN"
     gene            complement(15670..15948)
                     /gene="secE"
                     /locus_tag="WIX18_000788"
     CDS             complement(15670..15948)
                     /gene="secE"
                     /locus_tag="WIX18_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HEZ5237930.1"
                     /translation="MTEHTPEKKNVKVDQLVVQDKESASNSGKEGFFAYFSNSWSEFK
                     KVVWPKREDAVRMTVFVIVFVAVLSIFIYAADTAISWLFFDVLLRREG"
     gene            complement(16064..16139)
                     /locus_tag="WIX18_000789"
     tRNA            complement(16064..16139)
                     /locus_tag="WIX18_000789"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(16104..16106),aa:Trp,seq:cca)
     gene            complement(16146..>16373)
                     /locus_tag="WIX18_000790"
     CDS             complement(16146..>16373)
                     /locus_tag="WIX18_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEZ5237931.1"
                     /translation="HTPFFANYRPQFYFRTTDVTGAVTLEEGVEMVMPGENVTITVEL
                     IAPIAMEEGLRFAIREGGRTVGAGVVSSVIA"
BASE COUNT         4137 a         4246 c         3637 g         4353 t
ORIGIN      
        1 gctaattcct ttacattaaa gatcgattaa agaacaatgc cgtctgaaaa atcatttcag
       61 cctttcggac ggcctatttg cctgattagc ctttacgggc ttcagttaca gcagcagcta
      121 tgtgagcagg agcttcagaa tatttcttga actccataga gtaagtagcg cggccttggg
      181 ttgcagaacg caggtcggtc gaataaccga acatttctgc cagaggtact tcggcacgga
      241 cttttttacc gccgataccg tcatcatcca tacccaatac aacaccgcga cggcggttca
      301 agtcgcccat tacgtcgccc atgtattctt ccggagtttc cacttcaact gccataatcg
      361 gctcaagcag ggcaggagat gcttgacgca taccttcttt aaacgcttga gaagcggcca
      421 attcaaatgc caattgggaa gagtcgacat catggtaaga accgaatacc agacggatac
      481 gtacatcaac tacaggatag ccggcaacga taccgttagg caatgtatcg cggatacctt
      541 tatcgacaga cggaatgaat tcgcgaggaa tcacgccacc tttaatttca tcgataaact
      601 cgtaaccttc gccccccggt tccataggtt ccatttcaat cacaacgtga ccatattgac
      661 ctttaccacc ggattgtttc gcgtgtttgt attcagcttt aacggctttg cggatagttt
      721 cacggtaagc cacttgaggt gcaccgatat ttgcttccac accgaattcg cgtttcatac
      781 ggtcaacaat aatttccaag tgcagctcac ccataccgga aataatggtt tgaccggatt
      841 cttcgtctgt acggacacgg aaagaagggt cttctttagc caagcggttc agggcgatac
      901 ccattttctc ttggtcggct ttggttttcg gctcaacggc aatatggatt accggctcgg
      961 ggaattccat acgttccaag ataatcggcg cgctttccgc acacaaggtt tcaccggtag
     1021 taacgtcttt cagaccaata gcggctgcga tgtcgccggc gcgtacttct tcgatttcag
     1081 tacggtctgc ggcagtcatt tgtaccaaac gaccgatacg ttcgcgagtg ccttttacgg
     1141 agttcaatac ggtatcgccg gattttacta cgcctgagta aacgcggata aaggtcagct
     1201 gaccgacgta tttgtcgttc aacattttga acgccaatgc agagaatttc tcttcatcgc
     1261 tggcttgacg gctgtcggct tcctcggtat tcgggttgac accttgaacc ggaggaatat
     1321 cggtaggagc tggcagcaat tctacaactg cgtccaacat acgttgaaca cctttgtttt
     1381 taaatgcaga accacacagc ataggctgaa tttcgcctgc caaagtacgt tgacgcaacg
     1441 cgcctacgat ttcttcttcg gtcagctcgt cgccgcctaa gtatttgtcc atcagttctt
     1501 cgctggcttc ggctgcggct tcaatcatat tttgacgcca ttcttcggca gtttcgacca
     1561 attcggcagg aatatcgcca taggtaaagg ttgtaccttt atcggcttca ttccaaatga
     1621 tggatttcat tttcaacaaa tcaaccacac cgctgaagtt gtcttccgca ccaaccggaa
     1681 tgacgatagg tacagggttt gcgcgcaaac gggttttcat ttgctcgaca acgcggaaga
     1741 agttggcacc ctgacggtcc attttattga caaacgccaa gcgcggcact tggtatttgt
     1801 tggcttgccg ccatacggtt tcagattggg gttgaacacc gcccaccgcg cagtaaacca
     1861 ttaccgcgcc gtccaataca cgcatagaac gctctacctc tacggtaaag tcaacgtgtc
     1921 ccggggtgtc gatgatgttg aagcggtgct cggggaattg tttcgccata ccggaccagt
     1981 aggaagtaac ggcagcggag gtaatggtaa taccgcgctc ttgctcttgt tccatgtagt
     2041 cggtagtagc cgcaccgtca tgcacttcgc ccagcttgtg ggtcaaaccg gtatagaaca
     2101 aaatacgttc tgtcgtcgtg gttttacccg catcgatatg ggcggaaata ccgatgttac
     2161 ggtacaggct gatcggggtc ttacgagcca ttttattagc ctttcaaaat tagaaacgga
     2221 agtgagagaa tgctttgttg gcttcagcca tacggtgtac ttcttcacgt tttttcaacg
     2281 caccgccacg gccttcggac gcatcaatca attcgcctgc caaacgcagg tccatggatt
     2341 tctcaccacg tttgcgggcc gcatcgcgaa cccagcgcat tgccaaagcc aaacggcgtg
     2401 aaggacgaac ttcaacagga acttggtagt ttgcaccacc tacacggcgg cttttcactt
     2461 ccacgatagg tttggcgttt gcaatggctt cgttaaatac ttcgattgct actttgccgg
     2521 tttttttctc aatctgttcc aacgcaccgt aaacgatacg ctcggcaacg gattttttac
     2581 cgtcaatcat caatacgttc atgaatttgg tcaactcgac gctgccgaat ttaggatctg
     2641 gcagtacgtc gcgcttgggg acttctctac gtcttggcat tttaatttcc tttaatctat
     2701 tcagtcgggt ctattcccat gaatacccaa ttgagtattc acttactcgg ccgttgttca
     2761 gcttaggcgg ccgacgtgcc tatttaagtc ccagtaatta tttaggacgc ttagcaccgt
     2821 atttggaacg ggcttgttta cggtctttaa cgcctgcagt atccaaagaa ccgcgtacag
     2881 tgtggtaacg cacacctggc aagtctttta cacgaccgcc gcgaatcaat acgacactgt
     2941 gctcttgcag gttgtgacct tcgccgccga tgtatgaaat gacttcaaaa ccgttggtca
     3001 ggcggacttt acatacttta cgcaatgcag agttaggttt tttaggggta gtcgtgtata
     3061 cacgggtgca cacgccgcgt ttttgcgggc aggcttccag tgcgggcact ttgtttacgt
     3121 acacgggctt ttgacggcct ttgcgtacca attggttgat agttggcata ttttctcgtc
     3181 ctgttgagtt aaatacttgc cgacaccatg tcggcaagag tggaattata tttttattgc
     3241 aagtatacag tcaagcataa cgacaagaag aaagatgatt ttcttgtttg ccgataaata
     3301 tttaccgaca tccctcacaa tcagtcggac gactgaagaa aatactgtca atacgttttt
     3361 tctatactga caaaccgttc cttgccgctg cgcgaataaa aggcgggcat attgctgttg
     3421 atcttgttgt aacggaaatt tatttggggt gtaaatcctt tccacgacag ttttttatgc
     3481 cataaagccg cgctcatccg atgttaatcg gcattcctat ccggtcaccc cgaacatcgc
     3541 cgcctgccgc gcttttagga acttcagacg gcattgcatc gcgaaccggc ggtacatcct
     3601 cggcaaacgg caggagggcg aggctttccc cttcagacgg catcgcaatc cgattaccga
     3661 cgttaatcag ttcgacaggt acgccgatat cctcggcaaa cgtcgccgaa gtcagcaggc
     3721 agcctgcaaa aaagagattt ctgggtttca tatttatttt ttaaaggaaa tgccgtctga
     3781 agtttcagac gacatttgtt taaatggaaa acattaagac gctacttttt ttgaccgccg
     3841 aaaccaacat ccctagcaaa gttattttgg tctccggacg taccgacgac acccgccacc
     3901 tcgttggtct ccggcccgaa aatacctaag gaataatcca cacgcctcaa aatgacgaaa
     3961 acgcttgttt ttgccttaat cagacaaaga aaaaccgcaa gcttaaagct tgcggttttg
     4021 tattgaataa acgcaccaaa gattattcat ccgttacttg ggtttcagca gtctcctgtt
     4081 ccacctcttg ccattgttga tgacggctgc ggtggtaagt caaaccggta ccggcaggaa
     4141 tcaggcggcc gacgatgacg ttctctttta aaccgcgcag ttcgtcttgt ttgcccataa
     4201 tcgcggcttc ggtcagaaca cgggtcgttt cttggaacga tgcggcagaa atgaaactgt
     4261 cggtggacag ggaggctttg gtaataccca gcaatacgtt ttcgtaacgt gccggctctt
     4321 tgccttcttc caaagctttt tcattggccg ccatcacatc gccgcgttcg acctgctctc
     4381 cggtaatgaa cccggtttcg ccggcatccg caatgttcac acggcgcaac atttgacgga
     4441 tgatgacttc gatgtgttta tcagaaatct tcacaccttg cagacggtaa acctcttgca
     4501 cctcttggac aatgtagcgt gccagtgctt cgataccttg caaacgcaga atatcatgcg
     4561 gatcaacagc tccgtccacg atggtttcac cgcggtttac cacttgaccg tcgtgtacca
     4621 gaatttgttt ctctttggaa atcaaggtct cgtatgctac accgtccacg tcagtaacaa
     4681 tcagacgttg cttgcctttg gtctctttgc cgaaggaaac ggtaccggta atttccgcca
     4741 acataccggc atctttcggc acgcgtgctt caaacaattc ggcaacgcgc ggcagaccac
     4801 cggtaatgtc gcgggttttg gaagaggctt gcgggatacg cgccaatacg tcgcctttac
     4861 cgatttcctg accttcgcgt acggtaatca ccgcaccaac ggggaatgcc atcgaaaccg
     4921 gagtggacgt accgggaata cagatttcca cgccgttttc atccaacaat tttacagtcg
     4981 gacgcagcag tttggacgcg ctgctggaac ggcgtttacc gtcaatcacc accaaagtgg
     5041 acaaaccggt tacatcgtca gtttgtttcg caacggtaac accctcttcc acgttctcaa
     5101 atttcaccat acctgcatgt tcggtgatca tcggacgggt atgcggatcc caggttgcca
     5161 aggtttgacc ggctttaatg gccataccgt cttgtaccag caggatggca ccgtaaggta
     5221 ctttgtggcg ttcgcgttca cggccgatat cgtcgtgaat cacgacttca caagaacggc
     5281 cgatgacaac caactcgcct ttattgttgg caacataacg catttggctg ctgaatcgtg
     5341 ccgtaccgtt ggatttggct tccacttggc tggctgctgc cgcacgggat gccgcaccac
     5401 cgatgtggaa cgtacgcata gtcagctggg tacccggttc gccgattgat tgggcggcaa
     5461 tcacaccaac tgcctcaccg gcattgacca gcttaccacg tgccaagtcg cgaccataac
     5521 agtgcgcgca caaaccgtgg cgggttttac aagtaatcgg cgtacggact ttgacttcat
     5581 cgacaccgga ttggtcaatc atatccacca gtttttcagt caacaacgta ccggcttcaa
     5641 ccaaggtctc gccgcttgac ggatcgacaa cgtcagacgc agtaacacgg cccaaaatac
     5701 gatcgcgcaa tgcttcaatc acatcaccgc cttgtaccac tgccttcata acaaagccgt
     5761 ctgaagtacc gcaatcgtct tcaacaacga ccaaatcttg agttacgtct accagacgac
     5821 gggtcaggta accggagttc gcggttttca atgcggtatc cgccaaaccc ttacgcgcac
     5881 cgtgggtcgc aataaagtat tgcaatacgg tcagaccttc gcggaagttt gaggtaatcg
     5941 gcgtttcaat aatcgagccg tcaggtttcg ccatcaaacc gcgcatacct gacaactgtt
     6001 taatctgagc cgcagaacca cgggcaccgg agtctgccat catatagatg gagttgaatg
     6061 actcttgatc gacttcgttg ccggcacggt cgataacttt ttgtttggac aggttgtcca
     6121 tcatcgcctt agcgatttta tcgccggcac gaccccaaat atcgaccacc ttgttgtagc
     6181 gttcgccgtt ggtaaccaaa ccttgacggt attggtcttc gatttcttta acctcggcat
     6241 tggcttcagc cagcaaggcc gctttttctt ttggaatttc catatcgtca acggcaatgg
     6301 aaataccgcc ttttgccgca aatccgaaac cggtgtacat caggtggtca gcaaagataa
     6361 ccgtatcgcg caagccgcac aggcggaacg atgcgttaat cagtttagaa atttcttttt
     6421 tcttcaacgc tttgttgaca tattcaaacg gcaggccttt cggcaggatt tcgctcaaca
     6481 atgcacggcc gacggttgtt tcgtaacggt taacgacagg ctcaaactca cctgcttcgt
     6541 ttttcaccca ttcgcgcaga cgtacggtga tttttgtacc cagctcgacc tgtttggtat
     6601 ggtatgcgcg atgcacttct ttcacatcgg caaacaggct gccttcgcct ttggcattga
     6661 tacggtcgcg ggtcatgtag tacagaccca atacgatatc ttgggaaggt acaataatcg
     6721 gttcgccgtt ggcaggagac aatacgttgt ttgaagccag catcagcgtg cgtgcttcca
     6781 tttgtgcttc caagctcaat ggaacgtgta ccgccatttg gtcgccgtca aagtcggcgt
     6841 tgaacgcggc acacaccaat gggtgcaact gaatcgcttt accttcaatc aagataggtt
     6901 caaacgcttg aatacccaaa cggtgcaggg tcggcgcacg gttcagcata atcggatgtt
     6961 cgcggatgac ttcttccaag atgtcccata cttccggtac ttcttgctct accaattttt
     7021 tcgctgcttt aacggtggaa gccagacctt gtttttccaa tttgtggaaa atgaacggtt
     7081 tgaacagttc caaagccatt tttttcggca gaccgcattg gtgcagacgc aggtatgggc
     7141 ctacggtaat cacggaacgg ccggagtagt ccacacgttt gcccaacagg ttttgacgga
     7201 agcgaccgcc tttaccttta atcatgtctg ccaatgattt cagcgggcgt ttgttggcgc
     7261 cggtcatggc tttaccgcga cggccgttat ccaacagcga gtcaactgct tcttgcaaca
     7321 tacgtttttc gttgcggacg atgatgtcgg gcgcatgcag ttccaacaga cgtttcagac
     7381 ggttgttacg gttaataacg cggcggtaca aatcgttcaa atcggaagtg gcaaaacgac
     7441 caccatccaa tggaaccaac ggacgcaaat caggcggcaa taccggcagc acatccataa
     7501 tcatccattc cagtttcata ccggaacgat ggaaggcttc caatactttc aagcgtttgg
     7561 cgattttttt gattttggtg tcggaaccgg tcgattccaa ctcttggcgc aggatttcga
     7621 tttcgcccgc tacattcagg gtacgcagca attcgcggat accttccgca cccattttgg
     7681 catcgaaatc gtcgccgtat tcgtccagct tgttgtagta atcgtcttca gtcagcaatt
     7741 ggcggcgttg cagcggagtc ataccgggat cggttaccac aaatgcttca aagtacaata
     7801 cgcgctcgat gtcgcgcaaa gtcatgtcta acaccatacc caagcgggaa ggcagggatt
     7861 ttaagaacca aatatgtgcg acgggcgcag ccaattcgat atgacccatg cgttcgcggc
     7921 gcactttgga cagggttact tccacgccgc atttttcaca cgttacgcct ttaaatttca
     7981 agcgtttgta ttttccgcac aagcattcgt agtctttgac cgggccaaag attttggcac
     8041 agaacaaacc gtcacgctca ggtttgaacg tacggtagtt gatggtttca ggttttttga
     8101 cttcgccata agaccatgag cggatggttt cgggagaggc aataccgatt ttaatggcat
     8161 caaactcttc ttccatgccg gcagtttgca acggattaaa taagttcaac aaattcattt
     8221 ttgctccttg aaggaagtat ttttaccgca tggcggattt tcgatattgg gaaacggtac
     8281 ttttgatttc agacggccta aatgccgatt gcttcattct tattctgaaa ccactttttc
     8341 agacgaccct gaaaggccgt ctgaaaactt ttgtttagta acgttccaaa tcgatatcca
     8401 agcccagtga gcgaatctct ttgaccaata cgttgaagga ctcgggcata ccggcatcga
     8461 ttttgtgttc gcctttgacg atgttttcgt acattttggt acggccgttc acgtcgtcag
     8521 acttcacagt cagcatctct tgcagcgtgt atgccgcgcc gtatgcttcc aatgcccaaa
     8581 cctccatctc gccgaaacgt tggccgccga actgggcttt accgcccaaa ggctgctggg
     8641 taaccagact gtacggaccg gtagaacgcg cgtgcatttt ttcgtcaacc aagtggtgca
     8701 gtttcagata gtgcatcaca cctactgtaa ccttgcggtc aaatgcttcg cctgaacggc
     8761 cgtcatacag cgtgatttgg gttttactgt cgttgaagcc cagtttttca acctcaggat
     8821 cgtcgctcgg ataagccaag ttcagcattt cgcggatttc agactctttc gcaccgtcga
     8881 atacaggaga ggcgaaagat gcacctttgc gcaggttgga ggccagttcg atgatttctt
     8941 catcagtcag ggcatccaaa tcttctttct taccgctgcc gttgtagagt ctgttcaaga
     9001 actcgcgcaa ctcgcctgct ttgcgttgct ctttcagcat acggtcgata cgctcgccga
     9061 taccttttgc tgcccaaccc aagtgaactt ccaaaatctg accgatgttc atacgggaag
     9121 gtacgcccaa tgggttcagt acgatgtcta ccggacggcc gtccgccatg taaggcatgt
     9181 cttccactgg cagaatgcgc gataccacgc ctttgttacc gtggcggccc gccattttgt
     9241 cgccggcttg cagacggcgt ttgatggcga taaaaacttt caccattttt tgtacgccgg
     9301 gttgcaattc gtcgccttgg gtcagttttt tcttcttgat ttcgtataac tcgtccgctt
     9361 cttcgcgttt ttgttgcagg ctcactttaa tcagttccaa ctgcttggcc aaatcttcat
     9421 cggtcagacg gatatcgaac caatcgtgcc tgctcggcag acccgccaaa tattcggtag
     9481 taatttcgct gcctttagcc agcttcatcg gaccaccatt ggctttttga cccacaatca
     9541 tacgttcgat acggtcgaat gcgtcgttgt cgaaaatacg caattggtcg ttcaaatcca
     9601 aacggtagcg tttcaactcg gaatcgataa tggattgggc gcgtttgtcg cgttgaatac
     9661 cttcacgagt gaagacttga acgtcgataa ccgtaccgct cataccggta ggcatacgca
     9721 atgaagtatc ttttacgtca gacgcttttt cgccgaagat ggcgcgcaac agtttttctt
     9781 ccggcgtcag ctgggtttcg cctttaggcg ttactttgcc taccaacaca tcgccggctt
     9841 ctacttctgc accgatgtaa acgataccgg attcgtccaa gcggttttgc atacgctcgg
     9901 acaagttcgg aatatcgcgg gtaatgtctt ccgcacccag cttggtatcg cgggcaacga
     9961 cattcaattc ctcaatgtga atcgaagtgt aacgatcatc cgcagccact ttttctgaaa
    10021 tcagaatcga gtcttcatag ttgtaaccgt tccatggcat gaaggcgatg gtcatgtttt
    10081 gacccaaagc caattcgccc aagtcggtag acgcaccgtc ggccaccaag tcgccgcgtt
    10141 gcaacacgtc gcctgctttt acggccggac gttggttgat gttggtagat tggttggaac
    10201 gggtaaattt aaccaagttg taaatatcga cacccacttc gccggcagtc gcttcgtcgt
    10261 catggacacg aatcacaaca cggttggcat cgacatactc gaccacgccg cctcggcggg
    10321 caacgattgc agtagcagag tcaacggcaa cggaacgctc gataccggta ccgaccatcg
    10381 gtttttcagg acgcaagcaa ggcactgcct gacgttgcat attcgcaccc atcaatgcgc
    10441 ggttcgcgtc atcgtgttcc aagaacggaa tcagggatgc tgcaacggat accacttgac
    10501 cagttgccac gtccatatat tggacgcggt cgggcgttgc cataatggtt tcgccttttt
    10561 cacgacaggt aaccaaatcg ccaatcagat tgccatctga atccaaatcg gcattcgcct
    10621 gtgcaatcac atagcggcct tcttcgatgg cagacaagta atcgatttcc ttggttactt
    10681 tgccgtcgat aacgcggcgg taaggcgttt ccaagaaacc gtaatcattg gtgcgcgcat
    10741 aaacggacaa tgagttgatc aaaccgatgt tcggaccttc aggcgtttca atcggacata
    10801 cgcggccgta gtgggtcgga tgcacgtccc gtacctcgaa gccggcacgt tcgcgggtca
    10861 aaccgcccgg acccaatgcg gatacgcggc gtttatgggt tacttcagac aaggggttgg
    10921 tctgatccat aaactgactc aattggctgg agccgaagaa ttctttaata gcggcagaaa
    10981 caggttttgc attaatcaaa tcgtgcggca tcaagttttc tgattccgcc tgattcaaac
    11041 gttcttttac agcacgttcc acacgggcca aaccgctgcg gaattggttt tcagtcagct
    11101 cgcctaccga acgtactcgg cggttgccca agtgatcgat atcgtcaact tcaccatggc
    11161 cgttacgcaa ctcgaccaaa gtcgcaatcg aggcgacaat atcttcgacg ctcaggacat
    11221 aaccgccttt ttcggcagca ccggcaaacg tttcgttcag caggcggccg taccaagagt
    11281 tttgttgggc ttcggacagt ttttgttcgt atgtgcgcgt attaaatttc atacggccta
    11341 cgcgggacaa atcgtagctg tcttcactga agaacaagcg gttaaacaat tgctcgaccg
    11401 cctcttcggt gggcggttcg cccggacgca tcatacggta aatcgcaaca cgcgccgcct
    11461 gccggccggc agtctcatcc gtacgcaagg tgttggagat ataagcaccc tgatccaact
    11521 cattgatgta aagggtcgta atttctttta cgccgttgat atcaaatttg gccaacaact
    11581 cttctgtaat ttcatcattg gcagaagcca atacctcgcc ggtttccgaa tcaatcagat
    11641 cggcagccaa tgctttaccc agcaggcttt ccggttctac atccaaacgg gtcaggcctg
    11701 cattggtaat atcacggata tttttcgcag taatgcgctt acctttggca accaatacat
    11761 tgccttcttt atccaagata tcgaccttgg cagtttcgcc tttcagacgg cctgcgacca
    11821 aatcggtttg aacaccgttt gaagacaaat agaacgtttc tttgtcgtag aaaatatcca
    11881 agatttgctc attgccgtag cccaaagcct tcaacaaaat cgttaccggc attttacggc
    11941 ggcggtcgat acggaaatac agcaaatctt tcgggtcaaa ttcaaaatcc aaccatgaac
    12001 cgcggtaggg aatgatacgg gcggagaata acaacttgcc ggaagagtgc gtcttacctt
    12061 tgtcatgctc gaagaatacg ccgggcgaac ggtgcaactg ggagacaatc acacgctctg
    12121 tgccgttaat cacaaaagaa ccgctcgggg tcatcaacgg aatttcgccc atatacactt
    12181 cgttttcacg aacttctttt accgtcggtt tagatgcttc cttatccaaa atcaccaaac
    12241 ggatacgcgc gcgcaagggg gctgcataag tgattccgcg caactgacat tcgggaatat
    12301 cgaacaaagg ctcgcccaat gtgtaatgca caaactccaa tcgcgcataa ccgttatggc
    12361 tcacaatcgg gaaaatagaa ttaaatgccg cctgcagacc gtcatcggta cgtttgtcaa
    12421 aagcattttc cagctgcaaa aacttcgcat aagaatcaat ttgggttgct agcaagaaag
    12481 gaacttccaa aacattttcc cgctttgcaa aactcttacg gatacgtttt ttctcggtaa
    12541 acgaatagtt catacacact ccgaaaagta attttcaata ataggccgtc tgaaacaacg
    12601 gtacgcatca atctgatatt tacatttatt tgcaatgact tgataaaaac tatgcaaata
    12661 aatgtaaaca atacttgatg tttattttaa gaagcaaaat aaggctggca gaaaactgcc
    12721 agccttcata agaagcatca aattatttga tttcgacttt agcgcctgct tcttccagtt
    12781 gtttttggat gtcttcggct tcagctttag aaacaccctc tttaatggtt ttaggtgcgc
    12841 cgtcaacgat gtctttagct tctttcagac ccaaaccggt aattgcacgg acaactttaa
    12901 tcacgccgac tttttgatca ccggcagaag ccaaaacgac atcaaattcg gttttttctt
    12961 cagcatcggc agcaccggca ccagcaggac ctgcaactgc aacagcagca gcagaaacac
    13021 cgaatttttc ttcaaaagct ttaaccaagt cgttcaattc cattacggtc aaagaaccaa
    13081 ctgcttccaa aatgtcttct ttagtaatag ccatgctatt ttactccaaa tattgtatta
    13141 aaaaataatt gattaacaga aacaaaatcg attaagcggc ttcttcgccg gcttttttct
    13201 ctgccaaagc agccaaaccg cgcgcaaagc ccgatacagg agcttgcata acgaacaaca
    13261 gtttggacaa cagctcttcg cggctcggaa tagaagccaa ctcagcaacc tgagcagcat
    13321 tcattacttc gccattgtaa gaaccggctt taacgacaat tttgtcatct tttttcgcga
    13381 attggtgcaa cactttagca gcagcaacag catcttcaga agcagcgtaa accaacggac
    13441 caaccatttg atcggccaat tctgcaaatg aagtaccttg cactgcacga cgagccaaag
    13501 tatttttcag aacacgcaaa taaacgcctt ctttacgtgc attcgcacga agctcagtca
    13561 tactggaaac actgataccg cgatattcag cgactacgag ggtttgagcg ttagcaattg
    13621 ccgcgctaat ttcctcgacc gccactttct tggtttcaat attgagactc aaggtctacc
    13681 tcccactgtt tataaacagg ataccaaaac gatatcccac cagcgcggta acctaaaaag
    13741 acatcttaca agcaatcttg caatgtgttt caggactacc gtctgcgtag ggcagttacg
    13801 attaaatctt acgatcccta cggtcttgga catctactta attttaagta gcccaaattc
    13861 aagcagccca gaaaaccaaa ctgcttgaaa attccttaag attagttatt tacgcttgat
    13921 gtatcaacgc gaatacccaa acccatggtg ctagacacag caactttttt cagatactga
    13981 cctttagcgg cagcaggctt ggctttaacg atagcatcca gcaacgcatc aaagttctct
    14041 ttcaaatcag cttcagcgaa tgaagcacga ccaatcgttg catgaacaat acctgccttg
    14101 tcggtacggt actgcacttg acctgctttt gcatttttta ctgcttcggc aacattaggg
    14161 gtaaccgtac ctactttagg gtttggcatc agaccacgag gacccaagat ggtacccaat
    14221 tgaccaacaa tacgcattgc atcgggagaa gcaataacaa cgtcaaagtt cagattgcct
    14281 gctttgattt cagcagccaa atcttcgaaa ccgacgatat ctgcaccagc ttctttagca
    14341 gcttctgcat ttgcaccttg agtaaataca gccacacggg ttatcttacc ggtgccttta
    14401 ggcagaacga ccgaaccacg gataacttgg tcagatttac gcggatcaac gcccaagttg
    14461 aaagatacgt caacagactc gtcaaattta gcagtcgctg ctttttttac caaagcaatt
    14521 gcttcatcaa ttgcatataa tttattggct tccacagaag agcgaagagc tttcaagcgt
    14581 ttagatactt tagccattat acaacaccct ccacatccaa gcccattgag cgagcagaac
    14641 ctgctatagt acggacagcc gcatccaagt cagcagcagt caaatcagga tctttagttt
    14701 tagcaatttc ttccaactgg gcacgggtca atttacccac tttgttggtc agaggattag
    14761 aactaccttt ttgcaaaccg gcagcctttt tcaacaagat agaagctggc ggggttttca
    14821 tcacaaatgt gaatgattta tctgcaaatg cagtaatcac aaccggaatc ggtaagccag
    14881 gctccatacc ttgggttgca gcattaaatg ccttacaaaa ttccataata ttcaaaccgc
    14941 gctgacccaa agcaggacca accggaggag atggattggc tttacctgca ggaatttgca
    15001 gtttaatata gccgataatt ttctttgcca cttaacgaac tcctaaaaac gggtaagacg
    15061 cggaaccatt tccgctcccc aagttaattt ttgattctat cctcttattg cttttttttc
    15121 aagtataaaa atcagttaat cttttcaacc tggctgaact ccagctcaac gggtgtttct
    15181 ctaccaaata tctgaacaga cacgcgtaac ttattccgtt cataattgac ctcctcaacc
    15241 accccgttaa aatccgcaaa cggcccttca tttacacgaa cctgttgacc gacctcaaat
    15301 tcaacttttg gtttcggctt ctctatgccg gtctgaacct gctgtaaaat aatttcagcc
    15361 tctctctgac taatcggcgt aggtctatta gccctccctc caataaaacc ggaaacacgg
    15421 ggggtgcttt ttacaagatg ccaagagtca tctgtcattt ccatctcaac tagcacataa
    15481 ccaggatatg actttctttc actaatagtc ttacgaccat tgcggatatc aacaactttc
    15541 tctacaggca ccagaatttg tccgaaataa tctcccatct cctcacgggc aatgcgctct
    15601 tccaatattc gttggacatt cttctcaaac cccgaatacg cctgtacaac ataccatttt
    15661 ttcgacatct caaccttccc ttctcagcaa tacatcaaaa aataaccacg aaattgctgt
    15721 atctgccgca tagataaata tagaaagcac agcaacaaac actataacaa atacagtcat
    15781 tctgacagca tcttcacgct taggccaaac cacctttttg aattcggacc aagaatttga
    15841 gaaatatgca aaaaaccctt ccttaccgga attagatgca gattctttat cttgaacaac
    15901 cagttgatcc actttaacgt tctttttttc aggcgtatgt tctgtcatat tatttatcca
    15961 tcatagcatc tgtctattct caatccatgt aaatggcaag agagtttact aaataacaaa
    16021 tacaaaaaaa attaaccggc acaaggccgg ttaatttttt atttggcagg ccaagagggt
    16081 ctcgaacccc caaccctcgg ttttggagac cgatactcta ccaattgagc tattggcctc
    16141 taaacttaag cgataacaga agaaaccacg ccggcaccca cggtacggcc gccttcgcga
    16201 atcgcaaagc gcaaaccttc ttccatagcg ataggcgcaa tcagttctac ggtgatggtt
    16261 acgttttcac ccggcattac catttccaca ccttcttcca aagtaaccgc gccggttacg
    16321 tcggtggtac ggaagtagaa ttgcggacgg tagttggcga agaacggggt atg
//
LOCUS       DAWITQ010000030        15879 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.030, whole genome shotgun sequence.
ACCESSION   DAWITQ010000030 DAWITQ010000000
VERSION     DAWITQ010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15879)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15879)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15879
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.030"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(103..1428)
                     /locus_tag="WIX18_000791"
     CDS             complement(103..1428)
                     /locus_tag="WIX18_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HEZ5237932.1"
                     /translation="MKKYLFRAALCGIAAAILAACQSKSIQTFPQPDTSVINGPGRPV
                     GIPDPAGTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCA
                     QAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDRRTAQARFPIY
                     GIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGTHTADLSQFPITARTTAIK
                     GRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIR
                     IGYADKNEHPYVSIGKYMADKGYLKLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFF
                     RELTGSSNDGPVGALGTPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQ
                     DTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP"
     gene            1643..2482
                     /locus_tag="WIX18_000792"
     CDS             1643..2482
                     /locus_tag="WIX18_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family iron permease"
                     /protein_id="HEZ5237933.1"
                     /translation="MLVAFLIMLREGIEAALIVGIVAGFLKQSGHSKLMPKVWFGVVL
                     ASLMCLGIGYGIHSATGEIPQKQQEFVVGIIGLVAVAMLTYMILWMKKAARSMKRQLQ
                     DSVQAALNRGSGQGWALVGMAFLAVAREGLESVFFLLAVFKQSPTWQMPAGAVAGGLA
                     AAVIGALIYQGGMRLNLAKFFRWTGAFLIAVAAGLLAGSLRALHEAGIWNALQDIVFD
                     SSKYLHEDSPLGVLLGGFFGYTDHPTQGEALVWLLYLIPVITWFLCGSRPSETLTRKE
                     ELK"
     gene            2479..3645
                     /locus_tag="WIX18_000793"
     CDS             2479..3645
                     /locus_tag="WIX18_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake system protein EfeO"
                     /protein_id="HEZ5237934.1"
                     /translation="MRKFNLTALSVMLALGLTACQPPEAEKAAPAASGEAQTANEGGS
                     VSIAVNDNACEPMELTVPSGQVVFNIKNNSGRKLEWEILKGVMVVDERENIAPGLSDK
                     MTVTLLPGEYEMTCGLLTNPRGKLVVTDSGFKDTANEADLEKLSQPLADYKAYVQGEV
                     KELVAKTKTFTEAVKAGDIEKAKSLFADTRVHYERIEPIAELFSELDPVIDAREDDFK
                     DGAKDAGFTGFHCIEYALWVEKDVSGVKEIAAKLMTDVEALQKEIDALAFPPGKVVGG
                     ASELIEEVAGSKISGEEDRYSHTDLSDFQANVDGSKKIVDLFRPLIEAKNKALLEKTD
                     TNFKQVNEILAKYRTKDGFETYDKLGEADRKALQASINALAEDLAQLRGILGLK"
     gene            3909..5174
                     /gene="efeB"
                     /locus_tag="WIX18_000794"
     CDS             3909..5174
                     /gene="efeB"
                     /locus_tag="WIX18_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deferrochelatase/peroxidase EfeB"
                     /protein_id="HEZ5237935.1"
                     /translation="MSKNQPAQPTRRTLFKTAIAAGAVGAIGGYLGGKKQGETAERTA
                     ESQHSPQAYPCYGEHQAGIVTPQQAFSIMCAFDVTAQSAKQLENLFRTLTARIEFLTQ
                     GGEYQDGDDKLPPAGSGILGKAFNPDGLTVTVGVGSSLFDGRFGLKDKKPIHLQEMRD
                     FSNDKLQKSWCDGDLSLQICAFTPETCQAALRDIIKHTVQTAVIRWSIDGWQPKSEPG
                     AMAARNLLGFRDGTGNPKVSDPKTADEVLWTGVAANSLDEPEWAKNGSYQAVRLIRHF
                     VEFWDRTPLQEQTDIFGRRKYSGAPMDGKKEADQPDFAKDPEGNTTPKDSHIRLANPR
                     DPEFLKKHRLFRRAYSYSRGLASSGQLDVGLVFVCYQANLADGFIFVQNLLNGEPLEE
                     YISPFGGGYFFVLPGVEKGGFLGQGLLGV"
     gene            complement(5246..5575)
                     /locus_tag="WIX18_000795"
     CDS             complement(5246..5575)
                     /locus_tag="WIX18_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylphosphonate utilization protein"
                     /protein_id="HEZ5237936.1"
                     /translation="MSLPPCPQCASEYTYEDGGQYICPECAHEWNETESAADLAAQVL
                     DANGAALQNGDTVILIKDLKVKGSSMVIKQGTKVKGIRLQEGDHNIGCKIDGSAMNLK
                     SEFVKKA"
     gene            complement(5652..7022)
                     /gene="glmU"
                     /locus_tag="WIX18_000796"
     CDS             complement(5652..7022)
                     /gene="glmU"
                     /locus_tag="WIX18_000796"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HEZ5237937.1"
                     /translation="MPQNTLNIVILAAGKGTRMYSKMPKVLHEIGGETMLGRVIGTAA
                     ALNPQNICVVVGHGKEQVLDTVKRDVVWVEQTEQLGTGHAVKTALPHLAAEGRTLVLY
                     GDVPLIDVETLETLLEAAGNEVGLLTDVPADPSGLGRIIRDGSGSVTAIVEEKDADTA
                     QKAVKETNTGILVLPNAKLENWLNSLSSNNAQGEYYLTDLIAKAVADGIKVHPVQVHT
                     SYLAAGVNNKLQLAELERIFQTEQAQELLKAGVTLSDPARFDLRGRLKHGQDVVIDVN
                     CIFEGEVEIGDNVEIGANCVIKNAKIGANSKIAPFSHLEDCEVGENNRIGPYARLRPQ
                     AKLAADVHIGNFVEIKNAAIGKGTKANHLTYIGDAEVGSKTNFGAGTIIANYDGVHKH
                     KTVIGNEVRIGSNCVLVAPVTLGNKVTTGAGSAITRNVEDGKLALARARQTVIEGWVR
                     PEKDKQ"
     gene            complement(7077..7349)
                     /locus_tag="WIX18_000797"
     CDS             complement(7077..7349)
                     /locus_tag="WIX18_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spore cortex protein"
                     /protein_id="HEZ5237938.1"
                     /translation="MRKTFLILMTTAALLSGCAWETYQDGNGKTAVRQKYPAGTPVYY
                     QDGSYSKNMNYNQYRPERHAVLPNQTGNNADEEHRQHWQKPKFQNR"
     gene            complement(7375..8055)
                     /locus_tag="WIX18_000798"
     CDS             complement(7375..8055)
                     /locus_tag="WIX18_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HEZ5237939.1"
                     /translation="MQENPTVWLFDLDNTLHDADAGIFTLINRAMTRYMARRLKLSES
                     AASDLRQEYWHRYGATLAGLQIHHPEIDIAEFLRESHPIDAILTKLHGMADTEHTLCR
                     LNGRKAVFSNGPSFYVRAVVGALGLENRFDALFGTDDFGLLYKPNPQAYLNVCRLLDV
                     PPECCIMVDDSADNLHQAKALGMKTVWFGAKSHALSFIDACARDMAQLARYAETLSEH
                     RQTHYNTL"
     gene            8114..9115
                     /locus_tag="WIX18_000799"
     CDS             8114..9115
                     /locus_tag="WIX18_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ5237940.1"
                     /translation="MKRKIWLLPLLAVSAYLQAQTEVRLAVHKSFSLPKGLIARFERA
                     NDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPGSAP
                     VAVGLPSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSP
                     GLGFLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAA
                     SPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSREV
                     QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK"
     gene            9209..10057
                     /locus_tag="WIX18_000800"
     CDS             9209..10057
                     /locus_tag="WIX18_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEZ5237941.1"
                     /translation="MDFKQFDFLHLISVSGWEHLAEKAWAFGLNLAAALLIFLVGKWA
                     AKRIVAVMRAAMTRAQVDATLISFLCNVANIGLLILVIIAALGRLGVSTTSVTALIGG
                     AGLAVALSLKDQLSNFAAGALIILFRPFKVGDFIRVGGFEGYVREIKMVQTSLRTTDN
                     EEVVLPNSVVMGNSIVNRSTLPLCRAQVIVGVDYNCDLKVAKEAVLKAAVEHPLSVQN
                     EERQAAAYITALGDNAIEITLWAWANEADRWTLQCDLNEQVVENLRKVNINIPFPQRD
                     IHIINS"
     gene            10083..10568
                     /locus_tag="WIX18_000801"
     CDS             10083..10568
                     /locus_tag="WIX18_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HEZ5237942.1"
                     /translation="MDALHTIARNLTKKRQTVSCAESCTGGLLAAVFTSVAGSSQWFD
                     QSFVTYSNKAKEDRLGVLPETLLEHGAVSRQTVYEMARGAKAVAQADYAVGISGIAGP
                     GGGSESKPVGTVWFGFAFPGGSCEAMRRFDGNRESVRAQAVAFALERLAGLIENGGDA
                     V"
     gene            complement(10670..12238)
                     /gene="msrAB"
                     /locus_tag="WIX18_000802"
     CDS             complement(10670..12238)
                     /gene="msrAB"
                     /locus_tag="WIX18_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional peptide-methionine (S)-S-oxide
                     reductase MsrA/peptide-methionine (R)-S-oxide reductase
                     MsrB"
                     /protein_id="HEZ5237943.1"
                     /translation="MKHRTFFSLCAKFGCLLALGACSPKIVDAGAATVPHTLSTLKTA
                     DNRPASVYLKKDKPTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANLITVASPGFLH
                     EKKDGDFQKWYAGLNYPKLPVVTDNGGTIAQSLNISVYPSWALIGKDGDVQRIVKGSI
                     NEAQALALIRDPNADLGSLKHSFYKPDTQKKDSKIMNTRTIYLAGGCFWGLEAYFQRI
                     DGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRVVDP
                     TSLNKQGNDTGTQYRSGVYYTDPAEKAVIAAALKREQQKYQLPLVVENEPLKNFYDAE
                     EYHQDYLIKNPNGYCHIDIRKADEPLPGKTKTAPQGKGFDAATYKKPSDAELKRTLTE
                     EQYQVTQNSATEYAFSHEYDHLFKPGIYVDVVSGEPLFSSADKYDSGCGWPSFTRPID
                     AKSVTEHDDFSYNMRRTEVRSHAADSHLGHVFPDGPRDKGGLRYCINGASLKFIPLEQ
                     MDAAGYGALKSKVK"
     gene            12384..13649
                     /gene="ftsY"
                     /locus_tag="WIX18_000803"
     CDS             12384..13649
                     /gene="ftsY"
                     /locus_tag="WIX18_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEZ5237944.1"
                     /translation="MFSFFRRKKKQETPAPEEAQVQETAAKAESEVTQIVENIKEEVE
                     SLTESVKGQVESAVETVSGAVEQVKETVAEMLSEAEEAAEKAAEQVEAAKEAVAETVG
                     EAVGQVQEAVATTEEHKLGWAARLKQGLTKSRDKMAKSLAGVFGGGQIDEDLYEELET
                     VLITSDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPET
                     KEPFVIMLAGINGAGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNN
                     VTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKA
                     MPDAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRP
                     VPVRYIGVGEGIDDLRPFDARAFVDALLD"
     gene            13894..>15879
                     /locus_tag="WIX18_000804"
     CDS             13894..>15879
                     /locus_tag="WIX18_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly/adherence protein PilC"
                     /protein_id="HEZ5237945.1"
                     /translation="MNKTWKRQVFRHTALYTAILMFSHTGGGGAQAQTHSYTIVMNSQ
                     KLPEVKNGNYQGKNRQVTFNAYFQGTKKNSIFSFDNTDEVVAQKGGTVVFGAATYLPP
                     YGKVSGFDDKRLAERKNALDWIGTTAPGLVGYSYQGSTCNSRDCPELSYKTQFTFGTQ
                     GLKKKVDGKLDIDADKSRDGSPIYKLPDYPWLGVSFNLSSESTAESKHLKKLISSFSE
                     EVTQSNGTQNQYKDKNLVYTTDDHRNKNNNNRASRNNSHAVAFYLNAKLHLLEKKQIK
                     NITQVSELNLGELKTRIEPTDAWKNKRHHTLTVGQWEFKDTGKISVKLKLPQVKAGRC
                     INKPNPNKNTKAPSPALTAPALWFGPGQDGKAEMYSASVSTYPDSSSSRIFLQNLKRK
                     NDPGRPGRYSLATLNKSDIESREPTFTGRQTIIRLDGGVQQIKLDRNNTEVVNFNGNS
                     NNATFGIVSEYGLTPDVSEWKKVLLPWTVRVFADDSKFKEFNKEEKNNDNKPKYSQKY
                     RSRDSSKHERNLGDIVNSPIVAVGGYLATSANDGMVHIFKKGNGGDERNYSLKLSYIP
                     GTMPRKDIESKDSTLAKELRAFAEKGYVGDRYGVDGGFVLRQVNLNGKDHVFMFGAMG
                     FGGRGAYALDLTKADGSDPTAVSLFDVKHDNNGNNSNN"
BASE COUNT         3571 a         4047 c         4659 g         3602 t
ORIGIN      
        1 cgtcaaataa gaaaggaatt ttgtgcctgc ggtatcgcaa aacttcgcct taatgcgccc
       61 gattgcctag ggatgggctt cagacggcat tgttttgccg atttacgggc ggtattcggg
      121 cttcataccg ttgggcagaa gctgccagac atatcccgtg gttttctgtt tgccggcaag
      181 ttcgccggct tcgtcgccgt atccccaaaa ataatccacg cgcaccgcgc ctttaatcgc
      241 gctgccggta tcctgcgcca taatcaggcg gttgagggct ttgcgggtaa ccggatgggc
      301 ggtggcgaca aataagggcg cgcccaaggt aatgtagtgc cggtcgactg cgccggcgta
      361 ctcgcccatc agcggcgtgc ccagtgcgcc gacagggccg tcattgctgc ttccggtaag
      421 ctctcggaaa aagatatagc tggggttttg acccaaaact tcggcgaggc gttgcggatt
      481 ttgccgcata taagacttaa tgccctgcat ggaggtttgt ccgagtttga ggtagccctt
      541 atccgccatg tattttccga tggaaacata gggatgctcg tttttgtcgg catagccgat
      601 gcggatgtat ttgccggacg gggttttcag acggcccgag ccttgtatgt gcataaaaaa
      661 aagttcgaca gggtcttcgg cgtaaccgag tatcggtgct ttgccgtcaa gcgcgccgcc
      721 gttgatttgg ttgcgcgtgt ggtaggggag gaagcggctt ccttcaaacc tgcctttgat
      781 tgccgttgtg cgcgcagtga tggggaattg ggagaggtcg gcggtatgtg tgccgccggt
      841 attgtcgatt gtgccgctgt tttttcctgt ctgcctgatg cggacaaggg cttttccgct
      901 ccgcaaaccg gcaggcaggg ggacggagat aaaatcgtcg ggaataccgt aaatcgggaa
      961 gcgggcttgt gccgtccgcc tgtcgtcgcc cttcagcacc ggctcgtaat agccggtaac
     1021 cgtgccggca aggcttccgt tgcctgcaac ctgccacggc gtgaaatagc gttcaaaaaa
     1081 ctgttttgcc tgaaaggaat ggacgggggt ttgaaaggct tgggcgcaca catcctgcca
     1141 gccttggcgg tttttcaaat tggcgcagcc gaggcggaag gattgcaggc ttttggcgaa
     1201 atcctgcgcc gcccagtggg gtagggacag gtgcggtaca acggtataga cggcccctcc
     1261 gcctccgacc gtcgttccgg cggggtcggg gatgccgacc ggccggcccg ggccgttgat
     1321 gacggatgtg tcgggttgcg gaaaggtttg gatgctcttg ctttggcagg cggcgaggat
     1381 ggcggcggcg atgccgcaca gggcggcgcg gaacaggtat tttttcataa tggacaatgt
     1441 tgccggcagt aataaaaaaa aaagatggtt tcgggcggcg ttgcggcagc cgtggagagg
     1501 ggattttaac acagggcgca gctgcagcct gcggaacttt ccgccgcgcg gcaatgcaga
     1561 taaaaataac ttgcatttgt atttacaagc aatgaaaata ttccgataat atattattca
     1621 tcatccttgt tcgttcgcgt ttatgctggt cgctttttta attatgttgc gcgagggtat
     1681 cgaagccgcg ctcatcgtcg gcatcgttgc cggttttctg aaacagtccg gacattccaa
     1741 actgatgcct aaggtctggt tcggggtcgt ccttgcttct ttgatgtgtt tgggcatcgg
     1801 atacggcatc cattcggcaa cgggcgagat tccccagaag cagcaggagt tcgtcgtcgg
     1861 cattatcggt ttggttgctg tcgcgatgct gacttatatg attttatgga tgaaaaaggc
     1921 ggcgcgttcg atgaagcggc agcttcagga ttctgtacag gcggctttga accgtggcag
     1981 cggtcaagga tgggccttgg tcggtatggc gtttcttgcc gtggcgcgcg aaggtctgga
     2041 gagcgttttt ttcctgcttg ccgtattcaa acagagcccg acgtggcaga tgccggccgg
     2101 tgcggtagcg gggggtttgg ctgccgccgt gattggcgcg ttgatttatc agggcgggat
     2161 gcgcctgaat ctggcgaagt ttttccgttg gacgggggcg tttttgattg ccgttgccgc
     2221 cggtctgctt gccggctcgc tgcgcgcgct gcatgaggca ggtatttgga acgcgcttca
     2281 ggacattgtg ttcgactcat caaaatattt gcacgaagac agcccgttgg gcgtgctgct
     2341 cggcggattt ttcggctata ccgaccatcc gacgcagggc gaggccttgg tttggctgct
     2401 gtaccttatt cccgtcataa cttggttttt gtgcggcagc aggccgtctg aaactttaac
     2461 ccgtaaagag gagctgaaat gagaaaattc aatttgaccg cattgtccgt gatgcttgcc
     2521 ttaggtttga ccgcgtgcca gccgccggag gcggagaaag ctgcgccggc agcgtccggt
     2581 gaggcgcaaa ccgccaacga gggcggttcg gtcagtatcg ccgtcaacga caatgcctgc
     2641 gaaccgatgg aactgaccgt gccgagcgga caggttgtgt tcaatattaa aaacaacagc
     2701 ggccgcaagc tcgaatggga aatcctgaag ggcgtgatgg tggtggacga gcgcgaaaac
     2761 atcgcccccg gactttccga taaaatgacc gtcaccctgt tgccgggcga atacgaaatg
     2821 acttgcggtc ttttgaccaa tccgcgcggc aagctggtgg taaccgacag cggctttaaa
     2881 gacaccgcca acgaagcgga tttggaaaaa ctgtcccaac cgctcgccga ctataaagcc
     2941 tatgttcaag gcgaggttaa agagctggtg gcgaaaacca aaacctttac cgaagccgtc
     3001 aaagcaggcg acattgaaaa ggcgaaatcc ctgtttgccg acacccgcgt ccattacgaa
     3061 cgcatcgaac cgattgccga gcttttcagc gaactcgacc ccgtcatcga tgcgcgtgaa
     3121 gacgacttca aagacggcgc gaaagatgcc ggatttaccg gctttcactg tatcgaatac
     3181 gccctttggg tggaaaaaga cgtgtccggc gtgaaggaaa ttgcagcgaa actgatgacc
     3241 gatgtcgaag ccctgcaaaa agaaatcgac gcattggcgt ttcctccggg caaggtggtc
     3301 ggcggcgcat ccgaactgat tgaagaagtg gcgggcagta aaatcagcgg cgaagaagac
     3361 cggtacagcc acaccgattt gagcgatttc caagccaatg tggacggatc gaaaaaaatc
     3421 gtcgatttgt tccgtccgct gatcgaggcc aaaaacaaag ccttgttgga aaaaaccgat
     3481 accaacttca aacaggtcaa cgaaattctg gcgaaatacc ggactaaaga cggttttgaa
     3541 acctacgaca agctgggcga agccgaccgc aaagcgttac aggcctctat taacgcgctt
     3601 gccgaagacc ttgcccaact tcgcggtata ctcggcttga aataagccgc aagcgttcag
     3661 acggtatttg gcggcagata ccgtctgaag ttttatagtg gattaacaaa aaccagtacg
     3721 gcgttgcctc gccttgcctt gccgtgctat ttatactgtc tgcggcttcg tcgccttgtc
     3781 ctgatttttg ttaatccact atatccgcca tatattgcag ggcgggattt caacctgccg
     3841 ctatcggtta atggaaaaac ggcgtgcagg gatacccatc ctgctgcacg gatattgaag
     3901 gaaacaccat gagcaaaaac caacccgcac aaccgaccag gcgcactctt tttaaaaccg
     3961 cgatcgcagc cggagcagtc ggcgcaatcg gaggttatct cggcggcaaa aaacagggcg
     4021 aaaccgccga acgcaccgcc gaaagccaac actcgcccca agcctatccc tgctacggcg
     4081 aacatcaggc aggcatcgtt acgccgcagc aggcgttttc gattatgtgc gccttcgacg
     4141 taaccgcgca aagtgccaag cagctggaaa acctgttccg cacgctgacc gcccgcatcg
     4201 agtttctcac ccaaggcggc gaataccaag acggcgacga caaacttccg ccagccggca
     4261 gcggcatttt gggcaaagcc ttcaaccccg acgggttgac cgttaccgta ggggtgggca
     4321 gcagcctgtt tgacggtcgg ttcggactca aagacaaaaa accgattcat ttgcaggaaa
     4381 tgcgcgactt ctccaacgat aagctgcaaa aaagctggtg cgacggcgat ttgagcctgc
     4441 aaatctgtgc cttcaccccc gaaacctgcc aagccgccct gcgcgacatc atcaaacaca
     4501 ccgtccaaac cgccgttatc cgttggagta tcgacgggtg gcagcccaaa tccgaacccg
     4561 gcgcgatggc ggcgcgcaac ctgttgggct tcagggacgg cacgggcaac cccaaagttt
     4621 ccgaccccaa aactgccgac gaggttttgt ggacgggggt ggccgccaac agcctcgacg
     4681 aaccggagtg ggcgaaaaac ggcagctatc aggcagtccg ccttatccgc cactttgtcg
     4741 agttttggga caggacgccg cttcaagagc aaaccgacat tttcgggcgg cgcaaataca
     4801 gcggtgcgcc gatggacggc aaaaaagaag ccgaccaacc ggattttgcc aaagaccccg
     4861 aggggaatac cacgcccaaa gacagccata tacgcctggc gaatccgcgc gatcccgaat
     4921 tcctcaaaaa acaccgcctc ttccgccgcg cctacagcta ttcgcgcgga ctcgcctcaa
     4981 gcggacagct tgatgtcgga ctggtgttcg tctgctatca ggcaaacctt gccgacggat
     5041 tcatcttcgt gcaaaacctc ctcaacggcg aaccgctgga agaatacatc agccccttcg
     5101 gcggcggcta tttcttcgtc ttgcccggcg tggaaaaagg cggctttttg gggcaagggc
     5161 tgctgggcgt ataaatccgc catataaaaa acgccgtccg aaccttgcca aacgggttcg
     5221 gacggcgttt cttgtttttg ggcggtcagg cttttttgac gaattcggat tttaaattca
     5281 tcgcgctgcc gtcgattttg cagccgatgt tgtgatcgcc ttcctgcagg cgtatgcctt
     5341 tgacttttgt accttgtttg atcaccatcg agctgccttt taccttgagg tctttgatga
     5401 ggatgacggt atcgccgttt tgcagtgccg cgccgttggc atcgagcact tgagccgcaa
     5461 ggtcggcggc ggattcggtt tcattccatt cgtgggcgca ttcggggcag atgtattgtc
     5521 cgccgtcttc ataggtgtat tcggaggcgc attgtgggca tgggggtaat gacatggttt
     5581 gcagtcctta tctgatatcg gaggggtttg atgccgtctg aaacctgaaa ccggcttcag
     5641 acggcatggc tttattgttt gtctttttcc ggcctcaccc agccttcgat gacggtttgg
     5701 cgggcgcggg cgagggcgag tttgccgtct tcgacgttgc gggtaatcgc gctgcctgcg
     5761 cctgtggtta ctttgttgcc gagggtaacg ggggcaacca gtacgcagtt tgaaccgatg
     5821 cgcacttcgt tgccgatgac ggttttgtgt ttgtgcacgc cgtcgtagtt ggcaataatc
     5881 gtacctgcgc cgaagttggt tttgctgccg acttcggcat caccaatgta ggtgaggtgg
     5941 ttggctttgg tgcctttgcc gatggcggcg tttttgattt cgacgaagtt gccgatgtgt
     6001 acgtcggcgg ctagtttggc ttgcggacgc aaacgggcgt acgggccgat tcggttgttt
     6061 tcgccgactt cgcagtcttc gaggtgggag aagggggcga ttttgctgtt tgcgccgatt
     6121 ttggcgtttt tgatgacgca gtttgcgccg atttcgacgt tgtcgccgat ttcgacttcg
     6181 ccttcaaaga tacagttcac atcaattacg acatcttgtc cgtgtttcag acggcctcgt
     6241 aaatcgaaac gtgccgggtc gctcagggta acgcctgctt tgagcaattc ttgagcctgt
     6301 tcggtttgga aaatacgctc gagttcggcg agctggagtt tgttgttcac gccggcggcg
     6361 aggtaggagg tgtgcacttg gacgggatga actttaatac cgtcggcaac ggctttggcg
     6421 atgaggtcgg tcagatagta ttcgccttgg gcattgttgc tggagaggct gttcagccag
     6481 ttttccagtt tggcgttggg caggacgagg atgccggtgt tggtttcttt cacggctttt
     6541 tgggcggtat cggcgtcttt ttcttcgaca atggcggtta cgctgccgct gccgtcgcgg
     6601 atgatgcgcc ccaaacctga cgggtcggcg ggcacgtcgg tcaacagccc gacttcgttg
     6661 cctgcggctt cgagcagggt ttcgagggtt tcaacgtcaa ttaaaggaac gtcgccgtac
     6721 aacaccagcg tgcggccttc ggcggcaagg tggggcaggg cggttttgac ggcgtggccg
     6781 gtgccgagct gttcggtttg ttcaacccag acgacatcgc gtttgacggt gtctaaaact
     6841 tgctctttgc cgtggccgac gacgacgcag atgttttgcg gattcagcgc ggcggcggtg
     6901 ccgataacgc gcccgagcat tgtttcgccg ccgatttcgt gcaaaacctt gggcattttg
     6961 gaatacatgc gcgtgccttt gccggcggcg aggatgacga tgtttaaagt gttttgcggc
     7021 atagcgtttt cctgtgcaat gccgtctgaa agggcttcag acggcatagg gtgggtttat
     7081 cggttttgaa atttgggctt ttgccagtgt tggcgatgct cttcgtcggc gttgttgccg
     7141 gtttggttgg gtaacacggc atggcgttcg ggacggtatt ggttgtagtt catatttttc
     7201 gagtagctgc cgtcttggta ataaacgggc gtgccggcgg gatatttttg acggacggcg
     7261 gtcttgccgt tgccgtcttg ataagtttcc cacgcgcagc ccgacaaaag ggcggcggtg
     7321 gtcatcagga taaggaaggt tttacgcatg gcttttcttt cgtattttca ggatttagag
     7381 ggtattgtaa tgagtttggc ggtgttctga caaagtttct gcataccgag ccagttgcgc
     7441 catatcgcgt gcgcaggcgt cgataaagga cagcgcgtgg gattttgcac cgaaccagac
     7501 ggttttcatg cccaatgctt ttgcctgatg caggttgtcc gcgctgtcgt ccaccataat
     7561 gcagcattcg ggcggtacgt ccaaaaggcg gcagacattg agatacgctt gcggattggg
     7621 tttgtacagc agtccgaaat catccgtgcc gaacagtgcg tcgaaacggt tttccaaacc
     7681 gagtgcgccg acaacggcac ggacgtaaaa cgacggaccg ttggaaaaaa ccgccttgcg
     7741 cccgttcaga cggcataggg tgtgttccgt atccgccatg ccgtgcagct tggtcaggat
     7801 tgcatcgatc ggatggcttt cgcgtaaaaa ttcggcgatg tcgatttcgg gatggtggat
     7861 ttgcagtccg gcgagcgttg cgccgtagcg gtgccaatat tcctgacgca ggtcggacgc
     7921 ggcggattcg gagagtttga ggcggcgtgc catatagcgt gtcatagcgc ggttgatgag
     7981 tgtgaagatg cctgcgtcgg catcgtgcag cgtgttgtcg aggtcgaaca gccacacggt
     8041 cgggttttct tgcattttga accgtgaaaa tttgttagaa tgttatttta cagcgaatag
     8101 aggaggactc ggaatgaaac ggaaaatttg gctgctgccg ctgctggcgg tttcggcata
     8161 cctgcaggcg cagacggaag tcaggctggc ggtgcataag tcgttcagcc tgcccaaagg
     8221 gctgattgcg cgcttcgagc gggcaaacga tgcgaaggtg tcgattattc aggcgggcgg
     8281 cgcgaacgaa atgctcaaca aactgatttt gagccgcgcc aacccgatcg ccgacgcggt
     8341 gtacggcttg gacaacgcca atatcggcaa ggcgcgggaa atgggcattt tggcggcggc
     8401 gcaacccgga tccgcccccg tcgcggtcgg gctgccttcg gctttggcgg tcgattacgg
     8461 ctatgtgtcc atcaattacg acaaaaaatg gtttgaaggc aaaaagcttc ctctgccgca
     8521 aaccctgcag gatttgaccc gccccgaata taaaaaccta ttggtcgtgc cgtctcccgc
     8581 cacgtcgtcc ccggggctgg gcttcctgat ggcgaacatc agcggtctgg gcgaagaagg
     8641 cgcgttcaaa tggtgggcac agatgcggca gaacggcgtg aaggtcgcca aaggctggag
     8701 cgaggcgtat tacaccgact tttcgcacaa cggcggcgcg tatccgctgg tggtcggtta
     8761 tgccgccagc ccggcggcgg aagtgtattt ttccaaaggc aaatacagcg agccgccgac
     8821 gggcaacctg tttttaaaag gcggcgtatt ccgccaggtc gaaggcgcgg cggtcttgaa
     8881 gggcgcgaaa cagccggaat tggcggcaaa actggtgcaa tggctgcaaa gtcgggaagt
     8941 gcagcaggcg gttccgtccg aaatgtgggt ttaccccgcc gtcaaaaaca cgcgcctgcc
     9001 cgacgtgttc cgcttcgccc aagccccgac gcacaccacc gcccccgcgc agcgcgatat
     9061 tgatgcgaac cagcgcggat gggtttcccg ttggattaga acggttttga aataaaacaa
     9121 acataccgcc ccgcagggct tcatacggca tttttacacc tgtgccgatt acgccgcacg
     9181 gggcggatgt tcgatcaaga ggaaaacaat ggacttcaaa caatttgatt ttttacacct
     9241 gatcagtgtt tccggttggg agcatctggc tgaaaaggcg tgggcgttcg ggctgaacct
     9301 tgccgccgcg ctgcttattt ttttggtcgg aaaatgggcg gcgaaacgca ttgtcgccgt
     9361 gatgagggcg gcgatgacgc gcgcgcaggt cgatgccacg ctgattagtt ttttgtgtaa
     9421 tgttgccaat atcggcttat tgattttggt gattattgcc gcattgggca gattgggcgt
     9481 ttccacaaca tccgtaaccg ccttaatcgg cggcgcgggt ttggcggtgg cgttgtcctt
     9541 gaaagaccag ctgtccaatt ttgccgccgg cgcgctgatt atcctgttcc gcccgttcaa
     9601 agtcggcgat tttatccgcg tcggcggttt tgaaggatat gtccgagaga ttaaaatggt
     9661 gcagacttct ttgcggacga ccgacaacga agaagtcgtg ctgcccaaca gcgtggtgat
     9721 gggcaacagc atcgtcaacc gttccacact gccgctgtgc cgcgcccaag tgatagtcgg
     9781 cgtcgattac aactgcgatt tgaaagtggc gaaagaggcg gtgttgaaag ccgccgtcga
     9841 acaccccttg agcgttcaaa acgaagagcg gcaggccgcc gcctacatca ccgccttggg
     9901 cgacaatgcc atcgaaatca cattatgggc ttgggcaaac gaagcagacc gctggacgct
     9961 gcaatgcgac ttgaacgaac aagtggtcga aaacctccgc aaagtcaata tcaacatccc
    10021 gttcccgcaa cgcgacatac acatcatcaa ttcttaaacg ccgtctgaaa gaggagtggg
    10081 aaatggacgc gctgcacacc atcgcccgaa acctgacgaa aaaacgtcaa accgtaagct
    10141 gtgccgaatc ctgcacgggt gggctgcttg ccgccgtatt cacaagcgtt gcaggcagtt
    10201 cgcaatggtt cgatcaaagt tttgtaacat acagcaacaa agccaaagaa gaccgcttgg
    10261 gcgtgttgcc cgaaaccctg ctcgaacacg gcgcggtcag ccgccaaacc gtctatgaga
    10321 tggcgcgcgg cgcgaaagcc gtggcgcagg cggattacgc cgtcggtatt tccggcatcg
    10381 ccggtccggg cggcggcagc gaaagcaaac ccgtcggcac ggtttggttc gggtttgcct
    10441 ttccgggcgg aagttgcgaa gcaatgcgcc gttttgacgg caaccgcgaa tccgtccgcg
    10501 cgcaggcggt cgccttcgcg ttggaacggt tggcggggct gattgaaaac ggcggcgatg
    10561 ccgtctaaac aaaatctccg tctggacaaa atccccgccg gataaaaaat accgtctgaa
    10621 acgttgcagg tttcagacgg tattttgtcg ggttaggcgg cggtgcggct tatttcactt
    10681 tactcttcaa cgcgccgtag cctgccgcgt ccatttgttc cagcgggatg aatttcaagc
    10741 tcgcgccgtt gatgcagtag cgcagtccgc ctttgtcgcg cgggccgtcg gggaagacgt
    10801 gccccaagtg tgagtcggcg gcgtggctgc gcacttcggt gcggcgcatg ttgtagctga
    10861 aatcatcgtg ttcggtaacg gattttgcat caatcgggcg cgtgaagctc ggccagccgc
    10921 agccggaatc atatttgtcg gcggagctga acaaaggttc gccgctgaca acgtccacat
    10981 aaatgccggg tttgaacaaa tggtcgtatt cgtggctgaa ggcatattcg gtcgcgctgt
    11041 tttgggtaac ttggtattgc tcttcggtca gggtgcgttt gagttcggcg tcactcggtt
    11101 ttttatacgt tgccgcgtcg aagcctttgc cttgcggtgc ggtcttggtt ttgcccggca
    11161 gcggttcgtc ggctttgcgg atatcgatgt ggcagtagcc gttggggttt ttaatcaagt
    11221 agtcctgatg gtattcctcg gcatcgtaga agtttttcag cggctcgttt tcaacaacga
    11281 ggggcagttg gtatttttgc tgctcgcgtt tgagggcggc ggcgatgacg gctttttcgg
    11341 cggggtcggt gtagtacacg ccgctgcggt attgcgtacc ggtgtcgttg ccctgtttgt
    11401 tgaggctggt cggatcaacg acgcggaaga aatattgcag gatgtcgtct aggctgagtt
    11461 tgtcggcatc gtaggtcact ttgacggttt cggcgtggcc cgtatggcgg taggacacgt
    11521 cttcatagct cggatttttc gtgttgccgt tggcgtagcc ggataccgcg tcaaccacgc
    11581 cgtcgatgcg ttggaaatag gcttccaagc cccagaagca gccgccggcg aggtaaatgg
    11641 tgcgtgtgtt catgattttt gaatcctttt tctgagtgtc gggtttgtag aacgaatgtt
    11701 tcaagctgcc caaatcggca ttcgggtcgc ggattaacgc caacgcctgc gcttcgttga
    11761 tgctgccttt gacgatgcgc tgcacgtcgc cgtctttacc gattaacgcc cacgaggggt
    11821 aaacgctgat attcaggctt tgggcgatgg tgccgccgtt gtcggttacg acgggcagct
    11881 tgggataatt caaaccggca taccattttt ggaagtcgcc gtcttttttc tcgtgcaaaa
    11941 agcccggaga cgcgacggta atcaggttgg cggagctgaa ttttgcatct tgcgcccatt
    12001 tttcggtctg tcccaattcg gacagacaca aaggacacca gcttgcccaa aatttaatca
    12061 gcgtcggttt gtcttttttc aagtaaacac tggcggggcg gttgtctgcg gttttcaaag
    12121 tggataaagt gtgcggcacg gtcgcggctc cggcatcgac gattttgggc gaacaagcac
    12181 ccagcgcaag caggcagccg aacttggcgc aaagggaaaa gaaagtacgg tgtttcattt
    12241 taatgtttcc tgtgtggacg gtttgcatga ttagacgttt gagatgccga aaccttacag
    12301 cccggatttt cagacaacct tgccgcgcaa aatacgctac aatacaccct atttcaagtt
    12361 tctaaaatta aaaggaaaat tcaatgttca gcttcttccg tcgcaagaaa aaacaggaaa
    12421 cgccggctcc cgaggaggct caagttcagg aaactgcagc aaaagcagaa tccgaagtta
    12481 ctcaaatagt tgaaaatatt aaagaagaag tcgaatcttt aacggaaagc gtcaaagggc
    12541 aggtcgaatc ggctgttgaa accgtcagcg gtgcggttga acaggtaaag gaaaccgttg
    12601 ccgagatgct gtctgaagca gaggaagcgg cggaaaaagc agcggaacaa gtcgaagcgg
    12661 caaaagaagc cgttgccgaa accgtcggcg aggctgtcgg gcaagttcaa gaagccgttg
    12721 cgacaactga agaacacaag ctcggttggg cggcgcgttt gaaacaaggt ttgaccaaat
    12781 cgcgcgacaa aatggcgaaa tcgctggcgg gcgtgttcgg cggcggacaa atcgacgaag
    12841 atttgtacga agagctggaa accgtgctga ttaccagcga tatgggcatg gaagccaccg
    12901 aatacctgat gaaagacgtg cgcgaccgcg tcagcctcaa agggctgaaa gacggcaacg
    12961 aattgcgcgg cgcgctgaaa gaagccttgt acgacctgat taagcctcta gagaaaccgc
    13021 tggttttgcc cgaaaccaaa gagccgtttg tcatcatgct tgctggcatc aacggcgcgg
    13081 gcaaaaccac atccatcggc aaactcgcca aatatttcca agcgcagggc aaatctgtgc
    13141 tgcttgccgc cggcgatact ttccgcgccg ccgcgcgtga gcagcttcaa gcttggggcg
    13201 aacgcaacaa cgtaaccgtg atttcgcaaa ccacgggcga ttccgccgcc gtgtgcttcg
    13261 atgccgtcca agccgccaaa gcgcgcggca tcgacattgt gctggccgac accgccggcc
    13321 gcctgcccac gcagcttcac ttgatggaag aaatcaaaaa agtgaaacgc gtgctgcaaa
    13381 aagccatgcc cgacgcgcca cacgaaatca tcgtcgtgct tgatgccaat atcggtcaaa
    13441 acgccgtcaa ccaagtcaaa gcctttgacg acgcattggg gctgaccggt ttaattgtta
    13501 ccaagctaga cggcacggca aaaggcggca tcctcgccgc gcttgcctcc gaccgccccg
    13561 tccccgtccg ctatatcggc gtgggcgaag gcatagacga tttgcgcccg tttgacgcgc
    13621 gcgcgtttgt ggacgcactg ctggattgag ccgaaatgcc gtccgaaaac agcagaccga
    13681 tgccgtcatt cccgcgcagg cgggaatcca gactgtcggg catctgcagc ggtttgctaa
    13741 aaaacgcttt accgtgatca gtgtgcaaag ttaaaatggg gaggtaagct tttcaaccag
    13801 caattcggcg ggcgcggaat cgggcggttt accgaacccc ggcgttcgcg gcgcgccgcc
    13861 ccgtcccgtg aaggcaaact caaggaataa aagatgaata aaacttggaa acggcaggtt
    13921 ttccgccata ccgcgcttta taccgccata ttgatgtttt cccataccgg cggggggggg
    13981 gcgcaggcgc aaacgcattc atacactatt gtaatgaaca gtcaaaagct gcccgaggta
    14041 aagaatggga actaccaagg caagaaccgc caagttacct ttaatgcata ttttcaggga
    14101 actaaaaaaa actctatttt ctcattcgat aataccgatg aagttgttgc tcaaaaaggt
    14161 ggtactgtcg ttttcggcgc agccacctac ctgccgccct acggcaaggt ttctggtttt
    14221 gatgacaaaa ggctggccga gcgcaaaaat gcccttgatt ggattggtac gaccgccccg
    14281 gggctggtag gctacagcta ccaaggtagc acatgcaaca gcagagactg tcctgaactt
    14341 agctataaaa cccaatttac cttcggtact caagggttga aaaaaaaagt agacggcaag
    14401 ctggatatag atgcagacaa aagccgcgac ggttcgccca tttataaatt gccggattat
    14461 ccttggttgg gcgtgtcttt caatttgagc agcgagagca ccgccgaatc aaagcacctc
    14521 aagaaattga tatcttcttt tagcgaggag gtgacgcagt ccaatggtac gcaaaaccaa
    14581 tacaaagaca aaaacctcgt ttatacgaca gacgatcacc gtaataagaa taataataat
    14641 cgtgccagtc ggaacaacag ccacgctgtc gccttttatc tgaacgccaa gctgcacctg
    14701 ctggagaaaa aacaaatcaa aaatatcacg caagtcagtg aacttaattt gggtgagttg
    14761 aaaacgcgta tcgagccgac ggacgcgtgg aagaataaga ggcatcacac tttaactgtt
    14821 ggtcagtggg agttcaaaga taccggaaaa atcagcgtca aactcaaatt gccgcaagtc
    14881 aaagcaggcc gctgcatcaa taaaccgaac cccaataaga ataccaaagc cccttcgccg
    14941 gccctgaccg cccccgcgct gtggttcgga cctgggcaag atggtaaggc ggagatgtat
    15001 tccgcttcgg tttccaccta ccccgacagt tcgagcagcc gcatcttcct tcaaaatctg
    15061 aaaagaaaaa acgaccccgg cagacccggc cgctattccc tcgcaacctt gaataagtcg
    15121 gatattgaaa gtcgagagcc gacttttaca gggcggcaaa caatcatccg attggatggc
    15181 ggcgtacagc agatcaaact ggatagaaac aatactgagg tcgtcaattt taatggaaac
    15241 agcaacaacg caactttcgg cattgttagt gaatatggcc tcacgcctga tgtcagcgag
    15301 tggaaaaaag tgctgctgcc ttggacggtt cgggtttttg ctgatgacag taaatttaaa
    15361 gaattcaaca aagaagaaaa aaacaacgac aacaagccaa aatacagtca aaaataccgc
    15421 agccgcgaca gcagcaagca cgagcgcaat ttgggcgaca tcgtcaacag ccccatcgtg
    15481 gcggtcggcg ggtatttggc tacttccgcc aacgacggga tggtgcatat cttcaaaaaa
    15541 ggcaacggcg gggacgagcg caactatagt ctgaagctca gttatatccc gggcacgatg
    15601 ccgcgcaagg atattgaaag caaagattct acactcgcca aagagctgcg cgcctttgcc
    15661 gaaaaaggct atgtgggcga ccgctacggc gtggacggcg gctttgtctt gcgccaagtt
    15721 aacttaaacg gtaaagacca tgtgtttatg ttcggcgcga tgggctttgg cggcagaggc
    15781 gcatacgcct tggatttgac caaagccgac ggcagtgacc cgaccgccgt ttccctgttt
    15841 gatgtcaaac atgacaataa tggcaataat agcaataat
//
LOCUS       DAWITQ010000031        15376 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.031, whole genome shotgun sequence.
ACCESSION   DAWITQ010000031 DAWITQ010000000
VERSION     DAWITQ010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15376)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15376)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15376
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.031"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(104..1891)
                     /gene="lpdA"
                     /locus_tag="WIX18_000805"
     CDS             complement(104..1891)
                     /gene="lpdA"
                     /locus_tag="WIX18_000805"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEZ5237946.1"
                     /translation="MALVELKVPDIGGHENVDIIAVEVNVGDTIAVDDTLITLETDKA
                     TMDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEAEGTAAAPKAEAPAAAPAQEAPKAA
                     APAPQAAQFGGSADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNV
                     GCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAK
                     SRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAATTGEKKIVAFKNCIIAAGSRVTKLP
                     FIPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ
                     GADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLV
                     AAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHE
                     GHVAAENCAGHKAYFDARVIPGVAYTSPEVAWVGETELSAKASGRKITKANFPWAASG
                     RAIANGCDNGFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIH
                     PHPTLGESIGMAAEVALGTCTDLPPQKKK"
     gene            complement(1909..2346)
                     /locus_tag="WIX18_000806"
     CDS             complement(1909..2346)
                     /locus_tag="WIX18_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237947.1"
                     /translation="MGNFLYRGISCQQDEQNNGQLKPKGNKAEVAIRYDGKFKYDGKA
                     THGPSVKNAVYAHQIETGLYDGCYISTTTDKEIAKKFATSSGIENGYIYVLNRDLFGQ
                     YSIFEYEVEHPENPNEKEVTIRAEDCGCIPEEVIIAKELIEIN"
     gene            complement(2440..4038)
                     /gene="aceF"
                     /locus_tag="WIX18_000807"
     CDS             complement(2440..4038)
                     /gene="aceF"
                     /locus_tag="WIX18_000807"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HEZ5237948.1"
                     /translation="MSIVEIKVPDIGGHENVDIIAVEVKAGDTIAVDDTLITLETDKA
                     TMDVPADAAGVVKEVKVKVGDKISEGGVILTVETGASAAEAAPAVAAEAQPAPAAAPV
                     AAGGATVQVAVPDIGGHTDVDVIAVEIKVGDTVAEDDTLITLETDKATMDVPCTAAGV
                     VKAVFLKVGDKVSEGSAIIEVETAGSVAAAPAQAAQAAAPAPTAAAAPAAAPAPSAPA
                     AAKIDEAAFAKAHAGPSARKLARELGVDLGQVKGTGLKGRIVGDDIKAFVKSVMQGGA
                     AKPAAAGASLGSGLDLLPWPKVDFSKFGNVEVKELSRIKKISGQNLSRNWVVIPHVTV
                     HEEADMTELEEFRKQLNKEWEREGVKLSPLAFIIKASVSALKAFPEFNASLDGDNLML
                     KNYFNIGFAADTPNGLVVPVIKDVDQKGLKQISQELTELSKKAREGKLKPQEMQGACF
                     TISSLGGIGGTGFTPIVNAPEVAILGVCKSQIKPVWNGKEFAPRLMCPLSLSFDHRVI
                     DGAAGMRFTVFLAKLLKDFRRITL"
     gene            complement(4188..6851)
                     /gene="aceE"
                     /locus_tag="WIX18_000808"
     CDS             complement(4188..6851)
                     /gene="aceE"
                     /locus_tag="WIX18_000808"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HEZ5237949.1"
                     /translation="MSTQLHDVDPIETQEWLDALSSVLEYEGGERAQYLLENLVKYCR
                     DKGVRMPHGTTTPYLNTVSVENEKGIPGDQNIEHRIRAFVRWNAAAIVLRAGKKDLEL
                     GGHIASFQSAATMYEVGFNHFWKAKGEGEEGDLVFFQGHVAPGIYAHAFVEGRLTEDQ
                     LNNFRQEVDGHGLPSYPHPHLLPDFWQFPTVSMGLGPIMAIYQARFLKYLESRGLAKT
                     KGRKVWCFCGDGEMDEPESQGAIALAAREGLDNLIFVINCNLQRLDGPVRGNGKIIQE
                     LEGNFAGAGWNVVKVIWGRRWDRLLAKDKDGILRQRMEECLDGDYQTYKSKDGAYVRE
                     HFFNTPELKALVADMTDEQLWALNRGGHDPQKVYNAYDRAANHADGKPTVILAKTIKG
                     YGMGASGEGQNVAHQAKKMDKASLKQFRDRFDIPVTDEQIESGDLPYLTFAPDTEEYK
                     YLHARRDALGGYLPQRKPTQEVLEVPELSAFDAQLKSSGEREFSTTMAFVRILSTLLK
                     DKKIGKRVVPIVPDESRTFGMEGMFRQYGIWNPKGQQYTPQDKDQLMFYKESVDGQIL
                     QEGINEPGAMADWIAAATSYANSNFAMIPFYIYYSMFGFQRIGDLAWAAGDMHARGFL
                     LGGTAGRTTLNGEGLQHEDGHSHIQADLIPNCVSYDPTFQYEVAVIVQDGLRRMYANN
                     EDVFYYITLMNENYTHPDMPEGAEQDILKGMYLLKAGGKGDKKVQLMGSGTILQEVIA
                     GAELLKADFGVEADIWSCPSFNLLHRDAVEVERFNRLHPLEAEKVPFVTSKLQGHDGP
                     VIAATDYIRSYADRIRAYIPNDYHVLGTDGFGRSDSRANLRRFFEVDRYNVAVAALAA
                     LAEQGKVSKETVQQAIEKYGIKADSAPSWKR"
     gene            7545..9257
                     /locus_tag="WIX18_000809"
     CDS             7545..9257
                     /locus_tag="WIX18_000809"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEZ5237950.1"
                     /translation="MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMP
                     MGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDR
                     DFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDA
                     YSFHADYASLQTTYDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE
                     DVIAYSDTSDYAANIELAPTLPLKGERTAAQAELTKVHTPNVKTIESLVEFLNIPVEQ
                     TLKSIVVEGENEGEIVLLLLRGDHEFNDIKAEKLAGVRSPLTMASPAAIVEQFGANGG
                     SLGPVSFAGKVYADFATEKGADWVIGANEDGYHYTSFNFGRDAAEPEFVDLRNVVEGD
                     ESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVV
                     AAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLD
                     DRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVTA
                     LLNG"
     gene            9320..9976
                     /locus_tag="WIX18_000810"
     CDS             9320..9976
                     /locus_tag="WIX18_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEZ5237951.1"
                     /translation="MASVFLEGEAVEVGNIFCIGRNYAAHIEELKNEIPSEPVVFMKP
                     SGSILNSGGTILLPEFSRDVQFECELVLLVGKDSDGTGEGKDILGCVAGYGVGLDLTA
                     RDIQCRLKEKGLPWLKAKGFRHSACVSDFAAAGRIGNPENVLFSLKQNGVLKQRGDTG
                     LMIYPIREILHKLAADYGLGKGDLVFTGTPSGVGAIGAGDNLALELDGLVRASFTVGC
                     "
     gene            complement(9986..10441)
                     /gene="ruvX"
                     /locus_tag="WIX18_000811"
     CDS             complement(9986..10441)
                     /gene="ruvX"
                     /locus_tag="WIX18_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HEZ5237952.1"
                     /translation="MHKIPKGTALAFDFGEARIGVAQGDAELGLSHPLSTVTGGSNDE
                     KFAAIAKLVQEWQPRYFVVGLPVHTDGTKHEMTHLSRKFGRRLNGRFNLPVYWVDERL
                     SSVYAESLLSEAQVFGKKRKSVLDQVAAQAILHGFFEGGPAECFNGREG"
     gene            complement(10434..10982)
                     /locus_tag="WIX18_000812"
     CDS             complement(10434..10982)
                     /locus_tag="WIX18_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HEZ5237953.1"
                     /translation="MNLSNHFLVAMPDMEDAFFSQSVVYICKHDEDGALGIAINKPSP
                     ITMDMIFSATGKNIPMRMQHDSVMMGGPVQVERGYVVHTPIGNWQSSIGVSDNIALTS
                     SRDVIENISREGAVDKALISIGYSSWGKGQLERELADNAWLTVPADEHILFDIPYEHR
                     YAAAFAKLGIDPLALFSGAGHA"
     gene            complement(10984..11544)
                     /locus_tag="WIX18_000813"
     CDS             complement(10984..11544)
                     /locus_tag="WIX18_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CreA family protein"
                     /protein_id="HEZ5237954.1"
                     /translation="MNRLLLLSAAVLLTACGSGETDKIGRASTVFNILGKNDRIEVEG
                     FDDPDVQGVACYISYAKKGGLKEMVNLEEDASDASVSCVQTASSISFDETAVRKPKEV
                     FKHGASFAFKSRQIVRYYDPKRKTFAYLVYSDKIIQGSPKNSLSAVSCFGGGIPQTDG
                     VQADTSGNLLAGACMISNPIENPDKR"
     gene            11872..13677
                     /locus_tag="WIX18_000814"
     CDS             11872..13677
                     /locus_tag="WIX18_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEZ5237955.1"
                     /translation="MRYKPLLLALMLVFSTPAVAAHDAAHNRSAEVKKQTKNKKEQPE
                     AAEGKKEKGKNGAVKDKKTGGKEAAKEGKESKKTAKNRKEAEKEATSRQSVRKGHEGD
                     KKSKAEHKKAHGKPVSGSKEKNAKTQPENKQGKKEAKGQGNPRKGGKAEKDTVSANKK
                     VRSDKNGKAVKQDKKYREEKNAKTDSDELKAAVAAATNDVENKKALLKQSEGMLLHVS
                     NSLKQLQEERIRQERIRQERIRQARGNLASVNRKQREAWDKFQKLNTELNRLKTEVAA
                     TKAQISRFVSGNYKNSQPNAVALFLKNAEPGQKNRFLRYTRYVNASNREVVKDLEKQQ
                     KALAVQEQKINNELARLKKIQANVQSLLKKQGVTDAAEQTESRRQNAKIAKDARKLLE
                     QKGNEQQLNKLLSNLEKKKAEHRIQDAEAKRKLAEARLAAAEKARKEAAQQKAEARRA
                     EMSNLTAEDRNIQAPSVMGIGSADGFSRMQGRLKKPVDGVPTGLFGQNRSGGDVWKGV
                     FYSTAPATVESIAPGTVSYADELDGYGKVVVVDHGENYISIYAGLSEISVGKGYMVAA
                     GSKIGSSGSLPDGEEGLYLQIRYQGQVLNPSSWIR"
     gene            13797..15281
                     /locus_tag="WIX18_000815"
     CDS             13797..15281
                     /locus_tag="WIX18_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEZ5237956.1"
                     /translation="MSKPVFKKIALYTLGAISGVAVSLAVQGFAAEKDRRDNEVLPVQ
                     SIRTMAEVYGQIKANYYQDKPDADLFEGAMKGMVAGLDPHSEYMDKKGYAEIKESTSG
                     EFGGLGMEIGQEDGFVKVVSPIEDTPAERAGVKSGDFIVKIDNVSTRGMTVSEAVKKM
                     RGKPGTKITLTLSRKNADKPIVVNLTRAIIKVKSVRHHLIEPDYGYIRVSQFQERTVE
                     SVNTAAKELLKENKGKPLKGLVLDLRDDPGGLLTGAVGVSAAFLPSEAVVVSTKGRDG
                     KDRMVLKAIPEDYVYGMGGDSLAGIPAELKTIPMTVLVNSGSASASEIVAGALQDHKR
                     AVIVGTQSFGKGSVQTLIPLSNGSAVKLTTALYYTPNDRSIQAQGIVPDVEVKDKERI
                     FESREADLVGHIGNPLGGEDVNSETLAVPLEKDADKPAVKEKGKKKKDEDLSSRRIPN
                     PAKDDQLRKALDLVKSPEQWQKSLGLAAKKPVSNKDKKDKKDKK"
BASE COUNT         3682 a         3779 c         4255 g         3660 t
ORIGIN      
        1 ccggaaaaaa tattttaatc cgctgtaaaa tagaaaatgc cgtctgaaca tttcagacgg
       61 catttgctca aataaacctt atcggctgtt tattcagtcg gatttatttt ttcttttgcg
      121 gaggcaggtc ggtacaagta cccaatgcca cttccgccgc cataccgatg gattcgccca
      181 aggtcgggtg cgggtggatg gttttgccga tgtctgccgc gtcgcagccc atttcgatgg
      241 caaggcagac ttcgccgatc atgtcgccac cgttcggacc gacaatgccg ccgccgatga
      301 tgcggccggt ttcggcatcg aaaatcagct tggtaaagcc gttgtcgcaa ccgttggcaa
      361 tcgcacgacc ggaagccgcc cacgggaagt tggctttggt gattttgcgg ccggaggctt
      421 tggcggacaa ctcggtttcg cccacccacg ccacttcggg ggaagtgtag gcaacgcccg
      481 gaatcacgcg cgcgtcgaag taggctttgt ggccggcgca gttttcagcg gcaacgtggc
      541 cttcgtgaac ggctttgtgc gccaacatcg gttgaccgac gatgtcgccg atggcgtaga
      601 tgtgcggcac gttggtacgc atttgtttgt ccacttcgat gaagccgcga tcggttacgg
      661 caacgcctgc tttttccgcg ctgatgagtt tgccgttggg cgcgcggccg gcggcaacca
      721 atacggcatc gtagcgttgc ggctctttcg gtgcatttgc accttcaaag gtaacgtaaa
      781 cgccgtcttc tttcggctcg actgcaacgg ttttggtgtt gaccataatg ttgtcaaaac
      841 ggtattcgtt ttgtttttgc catactttca ccaagtcgcg gtctgcgcct tgcatcaggc
      901 cgtccatcat ttcaaccaca tccaaacgcg aacccagcgt gctgtaaacc gtacccatct
      961 cgaggccgat aatgccgccg ccgataatca gcagtttgcc cggtacttct ttcagagcca
     1021 atgcgccgct ggaatcgatg atgcgcggat cttcaggaat gaaaggcagt ttggttacgc
     1081 ggctgcctgc tgcaatgata cagtttttga aggcaacgat ttttttctcg ccggtagtgg
     1141 ctgcctgttc gtacgcgtcg ccggcagtca gcgacacttc caagtggtgc gggtctaaga
     1201 attgcccgtc gccttggata acgtccactt tacggctttt cgccatacct gccaaaccgc
     1261 ccgtgaggcg ggaaactacg ccgtctttgt aggcgcgaag catatcgatg tcgagttccg
     1321 gctcggggta tttgataccg ttggcagcca agtggcgcac ttcgtcgata acggcggcat
     1381 tgtgcaacaa ggctttggaa gggatacagc cgacgttcag gcaaacgccg cccaaagttt
     1441 tgtaacgttc gacgatggcg actttcaagc cttcatcggc agcggcaaat gcagcggagt
     1501 aaccgccggg accgccaccc aatacgacca cgtcgtactc ggcatcggca gaaccgccga
     1561 attgcgcggc ttgcggagca ggagcagcag ctttaggggc ttcttgcgcc ggggcggcag
     1621 caggtgcttc agctttggga gcggctgccg tgccttcagc ttcaacgacg acaatcaagc
     1681 cgccttcgga gattttgtcg ccgactttga ctttcacttc tttgaccacg cccgcaactt
     1741 cggcaggcac gtccatcgtc gctttgtcgg tttccagggt aatcagggta tcgtcaacgg
     1801 cgatggtgtc tcctacgttc acttcaactg cgataatatc tacattttcg tgtccgccaa
     1861 tgtcgggcac tttcaattca actaaagcca ttatattgac ctttcaactt agttaatttc
     1921 tatcaactct ttagcaataa tcacttcttc aggaatacag ccacaatctt cagctctgat
     1981 tgttacttcc ttctcatttg ggttttctgg atgttcaacc tcatattcaa aaatagaata
     2041 ttgaccaaac aaatccctat ttaaaacata tatatagcca ttttcgatgc cggaacttgt
     2101 tgcaaatttc ttggcaattt ccttgtctgt tgtcgtagat atataacatc cgtcatatag
     2161 acctgtttca atttgatggg cgtaaactgc attcttcaca cttggaccat gtgtagcttt
     2221 accatcatat ttaaacttac catcataacg aattgcaact tcagctttat tacctttagg
     2281 ttttaactgt ccattatttt gctcatcttg ttggcaacta atgcctctat ataagaaatt
     2341 tcccataagt tattaattta aaggttgaat ttaacaccat tactcatcaa tctcaagcaa
     2401 tccaaacatt atcagactgc ttgagaggga tgttttattt tataaggtaa tgcggcggaa
     2461 gtctttcaac agcttcgcca agaatacggt gaagcgcata ccggccgcac cgtcgatgac
     2521 gcggtggtcg aaggacaggc tcaacgggca catcaggcgc ggggcaaact ctttgccgtt
     2581 ccaaaccggt ttgatttggg atttgcacac gcccaagatg gcgacttcgg gagcgttcac
     2641 aatcggcgtg aagcctgtgc cgccgatgcc gcccaagctg gaaatggtaa agcatgcgcc
     2701 ttgcatttct tgtggtttga gcttgccttc gcgggctttt ttggacaatt ctgtcagctc
     2761 ttggctgatt tgtttcaagc ctttttgatc cacgtctttg atgacgggaa caaccaagcc
     2821 gttcggcgta tcggctgcga aaccgatgtt gaagtagttt ttcagcatca ggttgtcgcc
     2881 gtccagagaa gcgttgaatt cggggaaggc tttcagcgcg gaaacggagg ctttgatgat
     2941 gaacgccaga ggagacagtt tcacgccttc gcgttcccat tctttgttca gttgtttgcg
     3001 gaattcttcc agctcggtca tatctgcttc ttcgtgtacg gtaacgtggg gaatcaccac
     3061 ccagttgcga gacaggtttt gaccggagat tttcttaatg cgggacaatt ctttaacttc
     3121 gacattgccg aatttggaga agtccacttt aggccacggc agcaagtcca gaccgctgcc
     3181 caaagatgcg ccggctgcgg caggttttgc cgcgccaccc tgcattacgg atttcacaaa
     3241 ggctttgatg tcgtcgccca cgatacggcc tttcaagccg gtacctttga cttggcccaa
     3301 atccacgccc aattcgcgcg ccagtttgcg tgcggaaggg ccggcgtgtg ctttggcgaa
     3361 agcggcctcg tcgattttgg cagcggcagg tgcagaaggt gcaggcgcgg cggcgggtgc
     3421 ggcggcagca gtcggagccg gtgcggcagc ttgagcggct tgagcaggag ctgctgcgac
     3481 agagccggcg gtttccactt cgataatggc agagccttcg gacactttgt cgccgacttt
     3541 taagaatacg gctttaacga cgccggcagc ggtacaaggt acgtccattg tcgctttgtc
     3601 ggtttccaaa gtaatcagcg tgtcgtcttc ggcaacggtg tcgcccactt tgatttcaac
     3661 ggcgattaca tccacatcgg tatgaccgcc gatatcggga acggctactt gaacggttgc
     3721 accgcctgcg gcaacgggtg cggcggcagg tgcaggttgt gcttcagcgg caacagccgg
     3781 agcggcttcg gcggcggagg caccggtttc aacggtcaaa attacgccgc cttcggagat
     3841 tttgtcgccg actttgactt ttacttcttt cacgacaccg gcagcatcgg caggcacatc
     3901 catcgtggct ttgtcggttt ccagtgtaat cagggtgtcg tcaacggcga tggtgtcgcc
     3961 cgctttaact tctacggcga tgatgtcgac gttttcgtga ccgccgatat cggggacttt
     4021 gatttctacg atactcattt gagttccttt aatcttgttc agttggatgc cgtctgaaag
     4081 ctgcttcagg cggcatcggt acggtttgtc tgctcaaacc attcgggcat tcggttttca
     4141 gacggcctga tgtcggaatg gggcaaacag gccgtctgaa acatcaatca gcgtttccag
     4201 ctaggagctg aatcggcttt gatgccgtat ttctcaatgg cttgttgaac ggtttctttg
     4261 ctgactttgc cttgttccgc caatgcggcc aatgcggcca cggcaacgtt gtagcgatcc
     4321 acttcaaaga agcggcgcag gttggcgcgg ctgtcggagc ggccgaagcc gtcagtaccc
     4381 aagacgtggt agtcgttcgg gatgtaggcg cggatacggt cagcatagct gcggatatag
     4441 tcggtagcgg caataaccgg accgtcatga ccttgcaatt tggaagtaac gaaaggtact
     4501 ttttcggctt ccagcggatg caggcggttg aagcgttcta cctcgacagc gtcgcggtgc
     4561 agcaggttga aggatgggca agaccaaatg tctgcttcca cgccgaagtc ggctttcagc
     4621 agttcggcac cggcaatcac ttcttgcaaa atcgtaccgg aacccatcag ttggactttc
     4681 ttgtcgcctt tgccgccggc tttcagcagg tacatacctt tcaagatgtc ttgttccgca
     4741 ccttcgggca tatccggatg ggtgtagttc tcgttcatca gggtgatgta gtagaacacg
     4801 tcttcattat tggcatacat acggcgcaga ccgtcttgta cgatgacggc gacttcgtat
     4861 tggaaagtcg ggtcataaga tacgcagttc ggaatcaggt cggcctggat gtggctgtgg
     4921 ccgtcttcgt gttgcaggcc ttcgccgttc agcgtcgtac ggccggcagt accgcccagc
     4981 aggaagccgc gcgcgtgcat atcgcccgcc gcccaagcca agtcgccgat acgttggaaa
     5041 ccgaacatag aatagtaaat gtagaacgga atcatggcga agttgctgtt ggcgtagctg
     5101 gttgcagccg caatccagtc ggccatcgcg cccggttcgt taataccttc ttgcaagatt
     5161 tgaccgtcaa cggattcttt atagaacatc agttggtctt tgtcttgagg ggtatattgc
     5221 tgacctttcg gattccaaat accgtattgg cggaacatac cttccatgcc gaaagtacgg
     5281 ctttcgtcgg gaacgatagg tacgacgcgt ttgccgattt ttttgtcttt cagcaaagtg
     5341 gacaggatgc ggacgaatgc catcgtggtc gagaactcgc gttcaccgct ggatttgagt
     5401 tgtgcgtcga atgctgacag ctcgggcact tccaatactt cctgcgtcgg tttgcgttgc
     5461 ggcaggtagc cgcccaaagc atcgcggcgt gcgtgcaggt atttgtattc ttccgtatcg
     5521 ggggcaaaag tcaggtaagg cagatcgccg ctttcgattt gttcgtcggt aaccggaatg
     5581 tcaaagcggt cgcggaattg tttcagggac gctttgtcca tttttttggc ttggtgggca
     5641 acgttctgac cttcgccgga tgcgcccata ccgtaacctt taatggtttt cgccaagatg
     5701 acggtaggtt tgccgtcggc atggttcgct gcgcggtcgt aggcgttgta cactttttgc
     5761 gggtcgtggc cgccgcggtt caatgcccag agttgctcat cggtcatatc ggcaaccaat
     5821 gctttcagtt cgggcgtatt gaagaagtgt tcgcgcacat acgcgccgtc tttggatttg
     5881 taagtttggt agtcgccgtc caaacattct tccatacgtt ggcgcaggat accgtctttg
     5941 tctttcgcca agaggcggtc ccagcggcgg ccccaaatga ctttgacgac attccagccg
     6001 gcgccggcaa agttgccttc caattcttgg atgattttgc cgttgccgcg taccggaccg
     6061 tccaagcgtt gcagattgca gttgatgacg aaaatcaggt tgtccaagcc ttcgcgtgca
     6121 gccagtgcga ttgcaccttg agattcgggt tcgtccattt cgccgtcgcc gcagaaacac
     6181 catactttac ggcctttggt ttttgccaaa ccacgcgatt ccaagtattt caggaaacgc
     6241 gcctgataaa tcgccatgat gggccccaag cccatggata cggtcgggaa ctgccaaaag
     6301 tcgggcaaga ggtgggggtg cggataggaa ggcagaccgt gtccgtccac ttcttggcgg
     6361 aagttgttca gctggtcttc ggtcagacgg ccctcgacga atgcgtgtgc atagatgccc
     6421 ggggcgacgt gaccttggaa gaagaccaaa tcgccttctt cgccttcgcc tttggctttc
     6481 caaaagtggt tgaaaccgac ttcgtacatg gtggcggcag attggaaaga tgcgatgtgc
     6541 ccacccagtt ccaaatcttt cttgccggcg cgcaatacga tggcggcggc gttccagcgc
     6601 acgaatgcgc ggatgcggtg ttcgatgttt tggtcgcccg gaatgccttt ttcgttttca
     6661 accgaaacgg tattcaaata cggggtggtc gtgccgtgtg gcatacgtac gcccttgtcg
     6721 cggcagtatt tgaccaggtt ttccaagagg tattgcgcgc gttcgccgcc ttcatattcg
     6781 aggacggagc ttaacgcgtc cagccactct tgggtttcga tagggtcaac atcgtgtaat
     6841 tgggtggaca tagtatctat cctttatgtt gagtgtttaa tcggcaggga gggtgtagcc
     6901 aaccccttta ttttcgtttg tgaaaaataa taagcaaaaa cgaaaatttc taaatcaaac
     6961 cgaaaaaaat aatttaagtt taatgttttc aaaaaattat aaaagttttg gaaacaaggg
     7021 aaaacttgaa aaaaatgttc gatctgctcc acacgaaatc ctatcagcaa tcgggtctgc
     7081 tggcaaataa ccatgcctgt aaaagcaggt tttatactga agttggcgtt tggtaaggtc
     7141 aagtcttttt gatttcgaaa tattctgttt gattttggcg atattttttc ggaattgtgg
     7201 tatatcgaat cattatgtct ctgtcggcaa ttttcctatt gtagaaaatc tatacacaag
     7261 ctttgtggat aaccgtgttg ataagccacg gcttgtgtta aaaaagtctt acgcaacaaa
     7321 tgtacgctta ttttgattaa aaaataggca catttaaatc tataaaaatc atgtgcttat
     7381 gttcaatatg atgtttctgg tcatgttttt gccgtctgtt atgggatttg tcccgcgctt
     7441 ggggcagggg gtgaattttg gaggttggtg caaaacctgc ttttttcgcg ttacaatctg
     7501 cacccgattt acttttgaat ttgcctgttt ggaaaaatac ttttatgaaa gccagccaat
     7561 tctttatctc tactttaaaa gaagcccctg ccgaagccgc gcttgccagc cacaagctga
     7621 tgattcgcgc cggtctgatt aaagccaacg cgtccggcct ttatacttgg atgccgatgg
     7681 ggctgcgcgt gttacgcaaa gtcgaaaacg tcgtgcgcga ggaaatggcg cgtgcgggca
     7741 gcgtggagtt gctgatgccg gtggtgcagc ctgccgagct gtggcaggaa tccggccgct
     7801 gggagtttta cggtaaagag ttgctgcgcc tgaaagaccg ccacgaccgc gatttctgca
     7861 tgggtccgac ctgtgaagaa gtcatcgccg acatcgtgcg caaagaaatc aacagctaca
     7921 aacagctgcc gaaaaacttt taccacatcc aaaccaaatt ccgcgacgaa gtgcgcccgc
     7981 gtttcggcgt gatgcgcgcg cgcgagttcg tcatgaaaga cgcttattcc ttccatgccg
     8041 actacgcctc gcttcagacg acctatgatg ccatgtatga cgcttactgc cgcatcttca
     8101 cccgtctggg cttggcattc cgccccgtcg ccgcagacac cggcagcatc ggcggtacgg
     8161 gttcgcacga gtttcaagtg ttggcggaaa gcggcgaaga tgtgattgcg tacagcgaca
     8221 cttccgatta cgccgccaat atcgagttgg caccgacctt gccgcttaaa ggcgaacgca
     8281 ccgctgctca ggccgagttg accaaagtac atacaccaaa cgtcaaaacc attgagtctt
     8341 tggttgaatt cctgaatatt ccggttgaac aaaccctcaa atccatcgtg gttgaaggcg
     8401 aaaacgaagg cgaaatcgtc ttattactgt tgcgcggcga ccatgagttc aacgacatca
     8461 aggcagaaaa actcgcaggc gtgagatcgc cattgacgat ggcaagtcct gccgcgattg
     8521 tcgaacagtt cggcgcaaac ggcggctcgc tgggtccggt cagctttgca ggtaaagttt
     8581 atgccgattt tgctactgaa aaaggagcgg actgggtcat cggtgcgaac gaagacggct
     8641 accactacac cagcttcaac ttcgggcgcg atgccgccga gcctgaattc gtcgatttgc
     8701 gtaatgtggt cgaaggcgac gaaagccccg acgggcaagg ccgtctgaaa ctcgcgcgcg
     8761 gcattgaagt cggacacgtc ttccagttgc gcgacaaata cacccaagcc atgaacgtaa
     8821 gcttccttga caacaacggc aaatcgcaaa ttatggaaat gggctgctac ggcatcggca
     8881 tcacccgcgt cgttgccgcc gccatcgagc agaataacga cgaaaaaggc atcatctgga
     8941 ccaaagcaat ggcgccgttt gaagtcgtta tcgtgccgat gaactacaaa aaatcagaca
     9001 ccgtacgcga agccgccgac aaaatctatg ccgaattgct ggcggcaggc gcggatgtgc
     9061 tgctggatga ccgcgacgaa cgcgcaggcg tattgctgaa cgattccgag ctgttgggta
     9121 ttccgcaccg catcgtcatc ggcgaccgcg ctttgaaaga aggcaatgtc gaatacgccg
     9181 aacgccgcaa caacgaagcg caggcagttg caatcggaga aattgttgcg cgtgtaacag
     9241 ctttattaaa tgggtaagct tggtcaaatg ccgtctgaaa ataatttcag acggcatttt
     9301 tatttgggga gaaagtgaag tggcttcagt atttttagaa ggagaagcag tcgaggtcgg
     9361 caatattttc tgtatcggca ggaactatgc cgcacatatt gaagagttaa aaaacgaaat
     9421 accttccgaa cctgtggtgt ttatgaagcc gtcaggcagc attttgaaca gcggcggtac
     9481 aatcttgctg cccgagttta gtagggatgt gcagtttgag tgcgaactcg tgctgctggt
     9541 cggtaaggat tcagacggca cgggcgaggg taaagatatt ttgggatgtg tcgcaggata
     9601 tggtgtaggg ctggacctta cggcacggga tatccaatgc cgtctgaagg aaaaagggct
     9661 gccctggctg aaggcaaaag ggttcaggca ttccgcgtgc gtgtcggatt ttgcggcggc
     9721 aggcagaatc ggcaatcccg agaatgtgtt gttttcatta aaacaaaacg gcgtattgaa
     9781 acagcgcggg gataccggtt tgatgattta cccgattcgg gaaattttac acaaactggc
     9841 ggcagattac ggtttgggga aaggggattt ggtgtttacc ggaacgccct ccggcgtggg
     9901 cgcaatcggt gcgggggaca atttggcatt ggagctggac ggcttggtgc gcgcctcttt
     9961 cacggtaggg tgttaaccgc gccgcttaac cctcacgccc gttgaaacat tccgccggac
    10021 cgccctcgaa aaaaccgtgc aagatggctt gcgccgccac ttggtcgagc accgatttgc
    10081 gttttttgcc gaagacctgt gcttccgaaa gcaggctttc ggcatagacg gacgacagcc
    10141 gttcgtcaac ccaatagacg gggagattga acctgccgtt cagcctgcgt ccgaacttgc
    10201 gcgacaggtg cgtcatttca tgtttcgtgc cgtcggtatg cacgggcagt ccgacgacaa
    10261 aataacgcgg ctgccattct tgaaccagct tggcgattgc cgcgaacttt tcatcgttgc
    10321 tgccgccggt aacggtgctc aaaggatggg atagccctaa ttccgcgtct ccttgtgcca
    10381 cgccgatacg cgcttcgccg aagtcgaatg ccagtgccgt tccttttgga attttatgca
    10441 tggccggctc ccgaaaacag ggcgagcggg tcgatgccga gtttggcgaa tgcggcggcg
    10501 taacggtgtt cgtaggggat gtcgaacagg atgtgttcgt cggcgggaac agtcagccac
    10561 gcattgtcgg caagttcgcg ttcgagctgg ccttttcccc agcttgaata gcctatgctg
    10621 atcaaggctt tgtcaaccgc accttcgcgt gaaatatttt caatcacgtc tcgggaagaa
    10681 gttagcgcga tattgtctga aacgccgata ctgctttgcc agttgccgat cggggtatgc
    10741 acgacataac ctcgctcgac ttgcaccggc ccgcccatca tcacgctgtc gtgctgcatc
    10801 cgcatgggga tgtttttgcc ggtggcggaa aaaatcatgt ccatcgtaat cggagagggt
    10861 ttgttgatgg cgatgccgag tgcgccgtct tcatcgtgtt tgcagatata gacgaccgat
    10921 tgtgaaaaaa acgcgtcttc catatcgggc atggcgacga gaaagtggtt ggagaggttc
    10981 atatcagcgt ttgtcgggat tttctatcgg gttggaaatc atgcaggcgc cggcaagcag
    11041 gttgccggaa gtatcggctt gcaccccatc ggtttgcggt atgccgccgc cgaaacagga
    11101 aaccgcgctt aaggaatttt tcggcgagcc ttggatgatt ttatcgctgt acaccaaata
    11161 ggcgaaggtt ttgcgtttgg ggtcgtaata acggacaatc tgccggctct tgaacgcgaa
    11221 gctcgcaccg tgtttgaaaa cttctttcgg tttgcgcacg gcggtttcgt caaaagaaat
    11281 cgaagatgcc gtctgaacgc acgaaaccga tgcgtcggac gcgtcctctt ccaaattgac
    11341 catttccttc aagccgcctt tttttgcata cgaaatataa caggcaaccc cttgaacgtc
    11401 gggatcgtcg aatccttcca cttcgatacg gtcgtttttg cccagtatgt tgaaaacggt
    11461 acttgcccgt ccgattttat cggtttcgcc gctgccgcag gcagtcagca ggacggcggc
    11521 agacagcagt agcagtctgt tcatcaaaat ttccttatcg gttgaatccc cgttttccgt
    11581 gaaggcggca gggcttgctt tgtttggagg ggcgcacgtt cccaaaatcg ggcaacatac
    11641 ggtatgcggc ttaatgtgct accctgtgtg tcggaacaca atatccgttg cggcattgaa
    11701 aatatgatgc acaatataag gctgtttgag ccgattgcaa gtatccgcgc aaagaaggcg
    11761 caagattggg caaacggcat tttcagacgg cataactgac agtataatcc aaacgtccgg
    11821 ctgctttcgt gcagccttca gtattatcca actttttccg aaggtcgaac catgcgctac
    11881 aaaccccttc tgcttgccct gatgctcgtt ttttccacgc ccgccgttgc cgcccacgac
    11941 gcggcacaca accgttccgc cgaagtgaaa aaacagacga agaacaaaaa agaacagccc
    12001 gaagcggcgg aaggcaaaaa agaaaaaggc aaaaatggcg cagtgaaaga taaaaaaaca
    12061 ggcggcaaag aggcggcaaa agagggcaaa gagtccaaaa aaaccgccaa aaaccgcaaa
    12121 gaagcagaga aggaggcgac atccaggcag tctgtgcgca aaggacacga aggggataag
    12181 aaatcgaagg cggaacacaa aaaggcacat ggcaagcccg tgtccggatc caaagaaaaa
    12241 aacgcaaaaa cacagcctga aaacaagcaa ggcaaaaaag aggcaaaagg acagggcaat
    12301 ccgcgcaagg gcggcaaggc ggaaaaagac actgtttctg caaataaaaa agtccgttcc
    12361 gacaagaacg gcaaagcagt gaaacaggac aaaaaataca gggaagagaa aaatgccaaa
    12421 accgattccg acgaattgaa agccgccgtt gccgctgcca ccaatgatgt cgaaaacaaa
    12481 aaagccctgc tcaaacaaag cgaaggaatg ctgcttcatg tcagcaattc cctcaaacag
    12541 cttcaggaag agcgtatccg ccaagaacgt atccgccaag agcgtatccg tcaggcgcgc
    12601 ggcaaccttg cttccgtcaa ccgcaaacag cgcgaggctt gggacaagtt ccaaaaactc
    12661 aataccgagc tgaaccgttt gaaaacggaa gtcgccgcta cgaaagcgca gatttcccgt
    12721 ttcgtatcgg ggaactataa aaacagccag ccgaatgcgg ttgccctgtt cctgaaaaac
    12781 gccgaaccgg gtcagaaaaa ccgctttttg cgttatacgc gttatgtaaa cgcctccaat
    12841 cgggaagttg tcaaggattt ggaaaaacag cagaaggctt tggcggtaca agagcagaaa
    12901 atcaacaatg agcttgcccg tttgaagaaa attcaggcaa acgtgcaatc cctgctgaaa
    12961 aaacagggtg taaccgatgc ggcggaacag acggaaagcc gcagacagaa tgccaaaatc
    13021 gccaaagatg cccgaaaact gctggaacag aaagggaacg agcagcagct gaacaagctc
    13081 ttgagcaatt tggagaagaa aaaggccgaa caccgcattc aggatgcgga agcaaaaaga
    13141 aaattggctg aagccagact ggcggcagcc gaaaaagcca gaaaagaagc ggcgcagcag
    13201 aaggctgaag cacgacgtgc ggaaatgtcc aacctgaccg ccgaagacag gaacatccaa
    13261 gcgccttcgg ttatgggtat cggcagtgcc gacggtttca gccgcatgca gggacgtttg
    13321 aaaaaaccgg ttgacggtgt gccgaccgga cttttcgggc agaaccggag cggcggcgat
    13381 gtttggaaag gcgtgttcta ttccactgca ccggcaacgg ttgaaagcat tgcgccggga
    13441 acggtaagct atgcggacga gttggacggc tacggcaaag tggtcgtggt cgatcacggc
    13501 gagaactaca tcagcatcta tgccggtttg agcgaaattt ccgtcggcaa gggttatatg
    13561 gtcgcggcag gaagcaaaat cggctcgagc gggtcgctgc cggacgggga agaggggctt
    13621 tacctgcaaa tacgttatca aggtcaggta ttgaaccctt cgagctggat acgttgatcg
    13681 gattgccgaa acggtaggct ttatgcaaat cgtgccgata tggtgcgctg ttccgtgaag
    13741 tttgccgtac ctgtattttc cggtttttgg aaatcaagag agaaagttaa agaagaatgt
    13801 cgaaacctgt ttttaagaaa atcgcacttt atactttggg tgcaatcagc ggcgtggccg
    13861 tcagtctggc ggtgcagggt tttgccgccg agaaggacag gcgggataac gaagtcctgc
    13921 cggtgcaatc catccgcaca atggcggagg tttacggtca aatcaaggca aactactatc
    13981 aggacaaacc cgatgccgat ttgtttgaag gtgcgatgaa gggtatggtg gccggtttgg
    14041 atccgcattc cgaatatatg gataaaaaag gttatgccga gataaaggag tccaccagcg
    14101 gcgaatttgg cggcttgggg atggaaatcg ggcaggaaga cggatttgtc aaagtggttt
    14161 cgccgattga ggacacgcct gcggaacggg cgggggtgaa aagcggcgat ttcattgtga
    14221 aaatcgataa tgtttcgaca cgcggcatga cggtcagcga agcggtgaag aaaatgcggg
    14281 gcaagccggg tacgaagatt actttgacgc tgtcgcgcaa aaatgccgac aagccgatag
    14341 tcgtcaacct gacccgtgcc attattaaag tgaaaagcgt ccgccatcac ctgatcgaac
    14401 ccgattacgg ctatatccgc gtgtcgcagt tccaagagcg gacggtcgaa agcgtcaata
    14461 ccgccgcaaa agagctgcta aaggaaaata aaggaaaacc gctcaagggg ctggtgttgg
    14521 atttgcgcga cgaccccggc gggcttttga ctggcgcggt cggcgtgtcg gcggcatttc
    14581 tgccgtctga agcagtcgtc gtcagcacca agggacgcga cggcaaagac cgcatggtac
    14641 tgaaagccat tcctgaagat tatgtgtacg ggatgggcgg cgattcgttg gcgggcattc
    14701 ctgccgagtt gaaaaccata ccgatgacgg tattggtcaa ttccggttcg gcttccgcgt
    14761 cggagattgt cgcaggtgca ttgcaggatc ataaacgcgc ggtcatcgtc ggtacgcaga
    14821 gcttcggcaa aggttcggtt cagactttga ttcctttgtc caacggcagc gcggtcaagc
    14881 tgacaacggc actgtattat acgccgaacg accgttctat tcaggcgcag gggattgttc
    14941 ccgatgtcga agtaaaagat aaggaacgca tttttgaaag ccgcgaggcg gatttggtcg
    15001 gacacatcgg caatcctttg ggcggcgagg atgtgaacag tgaaaccctt gccgtgccgc
    15061 ttgaaaaaga tgcggataag cccgctgtaa aagaaaaagg taaaaagaaa aaggacgagg
    15121 atttgtcttc aaggcggatt cccaaccctg ccaaagacga ccagttgcgg aaagctttgg
    15181 atttagtcaa gtcgcccgag cagtggcaga agtctttggg gctggcggcg aaaaagccgg
    15241 tttcaaataa agataagaaa gataaaaaag ataagaagta ggttttgacg atgccgtctg
    15301 aaaggatttc agacggcata ttatgtttga aaggacaggt tatgagcgat tttttaccgg
    15361 aatttgaacc gtgcgg
//
LOCUS       DAWITQ010000032        14925 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.032, whole genome shotgun sequence.
ACCESSION   DAWITQ010000032 DAWITQ010000000
VERSION     DAWITQ010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14925)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14925)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14925
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.032"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(97..3582)
                     /gene="smc"
                     /locus_tag="WIX18_000816"
     CDS             complement(97..3582)
                     /gene="smc"
                     /locus_tag="WIX18_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HEZ5237957.1"
                     /translation="MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAV
                     RWVLGEASAKQLRGESMQDVIFNGAATRRPAPRASVELVFDNSDHSLQGAWGQYAEVS
                     IKRQLTRQGESTYFINNQTVRRRDITDLFLGTGVGARGYAVIEQGMISRIIEARPEEL
                     RAYIEEAAGVSKYKERRKETEGRLKDTREHLQRLGDLQNELARQVEKLEKQAETAERY
                     KSLTAQLNRQQDLLDYAQWQQSLAAADKATEQHQSLQAQQDETAAQVQALNDEVHALQ
                     TAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQRIERDKQAAQAQMQRIHQE
                     QQQIRVQLEENELYVEEKQTELAEWAMQVAEHEERLPELEETQTALNAAFQTQQDEAN
                     RIRRELALKQQQLAHAEQTVAKHEERKGRLKQENQALNLPDEAETAAAQEAAALLQSR
                     QEHYEEQIIAAEEALHAAREAFQTASNRFQSLKQQHITLQAQQQALSQILSQQQEAAD
                     FWQATGHAAAPQLWQHITAPAEWQHALSVILAERLHARDVPQGFVPPEPLPQGQAAWL
                     SDGLSGGIKKSLPVQALLNQIQAQPPFQTALHHWLDGVLCAPDLSYALAHQNDLGAHQ
                     IWLTPEGHQVDKVSVLLYAKPAQESLIAQKARLDGIASELENLSPELSAAEAAFKQAE
                     AAVRSSEVQHKNLMQQQQQHTRQYSQAQQRAAELLARTNQGQIRREHIERELAQLAEE
                     QTVLQHASDGLSDDIATLQEAAAELEHQQQTAAHSRQEQQGRLKQAQLALLEANRQYG
                     LAEVAVHKLNQQKQNYQQQIARLEQQTLDWQERQQELVLAYETEFQNDEQHIKLDELT
                     ESVHTLDEEYIAVQEKLTQIQEQGREQYARVQTLQTQLPQLQAATQTALLQQQEALIN
                     AKRYHQNLTERAADLDALEALAKESPKVLNSSIGSLSQQIEALGAVNLAALQELEEAR
                     ERDGYYRSQSEDVQTAITLLEEAIAQIDDKTKARFKETFDAVNGKVQTFFPTLFGGGE
                     ATLKMIGDDLLTAGVSIMARPPGKKNSTIHLLSGGEKALTAMSLVFALFSLNPAPFCL
                     LDEVDAPLDDANTSRFCNLVKEMSAQTQFLYISHNRLTMEMAEQLVGVTMQEKGVSRV
                     VAVDIKQALEMAESV"
     gene            complement(3661..3807)
                     /locus_tag="WIX18_000817"
     CDS             complement(3661..3807)
                     /locus_tag="WIX18_000817"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237958.1"
                     /translation="MSWRIITRPAAGQYGKCRAKHRALAEPGFGALKMPSEGFRRHRG
                     CGMR"
     gene            3831..4553
                     /gene="lpxH"
                     /locus_tag="WIX18_000818"
     CDS             3831..4553
                     /gene="lpxH"
                     /locus_tag="WIX18_000818"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HEZ5237959.1"
                     /translation="MKPAYFISDLHLSEKQPELTALLLRFLRSSAAGQARTIYILGDL
                     FDFWVGDDEVSELNTSVAREIRKLSDKGVAVFFVRGNRDFLIGQDFCRQAGMTLLPDY
                     SVLDLFGCKTLICHGDTLCTDDKAYQRFRKIVHRKRLQKLFLMLPLKWRTRLAAKIRR
                     VSKMEKQVKPADIMDVNAAFTARQVRAFNAERLIHGHTHREHIHHENGFTRIVLGDWH
                     NDYASILRVDGDGAVFVPLEKC"
     gene            4822..6408
                     /locus_tag="WIX18_000819"
     CDS             4822..6408
                     /locus_tag="WIX18_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HEZ5237960.1"
                     /translation="MALFLSIFPIVLLIWLMVKKNSMPSYVALPITAVLIYAIKLFYF
                     GDAGMLLNATAASGLVKTLTPITVIFGAIMFNRMMETTGCIDVIRKWLATISPNPVAQ
                     LMIIGWAFAFMIEGASGFGTPAAIAAPILMSLGFNPLKVAIFTLVMNSVPVSFGAVGT
                     PTWFGFAPLNLSAEDILAIGRQTGVMHFFAGFVIPVIGLGFIVPWSEIRKNLGFVAIA
                     VFSCTIPYVALAMVNEEFPSLVAGAIGLMVSVFAANQGWGLSKDHAKDPNAEKVPFAQ
                     VAKALAPLGMLIGMLVVTRIKQLGIKGILTSKEEWFSFQLPFDLSKITVSDSLTITFG
                     NIFGQDVSASYQTLYVPAWIPFVLTVWICILLYKTKFKDAWTIYSVTFNQTKKPLLAL
                     MGALIMVQLMLVGGDNSMVKIIGKEFAAMAGEHWVYFSPYLGAIGAFFSGSNTVSNLT
                     FGPIQQQIALDTGLSVTLILALQSVGGAMGNMVCLNNIIAVCTVLDVKNSEGAIIKKT
                     VIPMAIYGVIAVVAAMIFFL"
     gene            complement(6576..6779)
                     /locus_tag="WIX18_000820"
     CDS             complement(6576..6779)
                     /locus_tag="WIX18_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HEZ5237961.1"
                     /translation="MDNLNLQEISVLPENLPLYCSGPDNEQWNGHPRVFLPLCEGESG
                     SVACPYCGTRYRLDGKMPHHHYA"
     gene            6895..7392
                     /locus_tag="WIX18_000821"
     CDS             6895..7392
                     /locus_tag="WIX18_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-mimic protein DMP19"
                     /protein_id="HEZ5237962.1"
                     /translation="MTALTLPEDILQQEPSVLLYTLVSAYLEHTAQTGDESLSCLSDD
                     QHTLTAFCYLDSQVEEGGFVQLIASGYGEYIFRNPLADSLRRWKIKAVPKVLDKAKAL
                     YEQHGETIETLADEGRDIPSLRKQFPDFEEWDGAYYEAAEQDLPLLAEHIRSNWETFA
                     HIGQA"
     gene            7474..8667
                     /locus_tag="WIX18_000822"
     CDS             7474..8667
                     /locus_tag="WIX18_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HEZ5237963.1"
                     /translation="MFFKHIEAAPADPILGLGEAFKAETRPEKVNLGIGVYKDASGAT
                     PLVKAVKEAEKRLLESETTKNYLTIDGVADYNEQTQILLFGKDHEIIASRRAKTAQSL
                     GGTGALRIATEFAKRQLNAQTIWISNPTWPNHNAIAKAVGIQDKPYRYYDAAKHGLDW
                     DGMIEDLSQAQKGDIVLLHGCCHNPTGIDPTPEQWETLAKLSAEKGWLPLFDFAYQGF
                     GNGLEEDAYGLRVFLKHNTELLIASSYSKNFGMYNERVGAFTLVAEDEETAARAHSQV
                     KTIIRTLYSNPASHGANTIALVLKNDDLKAQWIAELDEMRGRIKAMRQKFVELLKAKG
                     ASQNFDFIIEQNGMFSFSGLTPEQVDRLKNEFAIYAVRSGRINVAGITDDNIDYLCES
                     IVKVL"
     gene            complement(9070..10005)
                     /gene="hemC"
                     /locus_tag="WIX18_000823"
     CDS             complement(9070..10005)
                     /gene="hemC"
                     /locus_tag="WIX18_000823"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HEZ5237964.1"
                     /translation="MNPKKLVIASRESLLAMWQAKHIQGRLKALYPDCEVEILGMTTR
                     GDQILDKTLSKVGGKGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERA
                     NPFDAFVSNQYARLEEMPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLD
                     NGEYDAIILAAAGLQRLELDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKP
                     LNHDTTHACVTAERALARALGGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADA
                     QAPAEYADALGRAVAKKLADDGARELIGAVLNTEN"
     gene            10124..10639
                     /gene="ybeY"
                     /locus_tag="WIX18_000824"
     CDS             10124..10639
                     /gene="ybeY"
                     /locus_tag="WIX18_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HEZ5237965.1"
                     /translation="MKRAKQYPFLSLQRQRFHLNFENASSTANLPSERDFYRWAWSAL
                     KNEYRRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDL
                     IICPQVVLKEAAEQGKTPERHFAHLTIHGVLHLMGYDHIEDDEAEIMEAEEIRLMLAA
                     GFPNPYQEDEY"
     gene            10641..11465
                     /locus_tag="WIX18_000825"
     CDS             10641..11465
                     /locus_tag="WIX18_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEZ5237966.1"
                     /translation="MDGTQSKPKFFERLISRLAGEPDSAEDVLTLLRQAHEQEVFDAD
                     TLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKD
                     EVLGILHAKDLLKYMFNPEQFHLKSVLRPAVFVPEGKSLTALLKEFREQRNHMAIVID
                     EYGGTSGLVTFEDIIEQIVGEIEDEFDEDDSADNIHAVSSERWRIHAATEIEDINTFF
                     GTEYSSEEADTIGGLVIQELGHLPVRGEKVLIGGLQFTVARADNRRLHTLMATRVK"
     gene            complement(11608..12987)
                     /gene="nhaC"
                     /locus_tag="WIX18_000826"
     CDS             complement(11608..12987)
                     /gene="nhaC"
                     /locus_tag="WIX18_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HEZ5237967.1"
                     /translation="MFAFKSLLDMPRGEALAVVVALIAAMGYTIISLEWLPHMSIIAA
                     IVVLILYGLARGLKYNDMQQGMIGALNQGMGAIYLFFFIGLMVSALMMSGAIPTLMYY
                     GFGLISPTYFYFSAFALCSVIGVSIGSSLTTCATVGVAFMGMAAAFHADMAMTAGAIV
                     SGAFFGDKMSPLSDTTGISASIVGIDLFEHIKNMMYTTIPAWLISAALMLWLLPNVAA
                     QDLNGVESFRSQLEATGLVHGYSLIPFALLVVLALMRVNAVVAMLFTVIAAVAVTYLH
                     STPDLRQLGAWFYGGYKLEGEAFKDVAKLISRGGLESMFFTQTIVILGMSLGGLLFAL
                     GAIPSLLDAVRSFLTNAGRATFSVAMTSVGVNFLIGEQYLSILLSGETFKPVYDRLGL
                     HSRNLSRTLEDAGTVINPLVPWSVCGVFISHALGVPVWEYLPYAFFCYLSLALTLLFG
                     WTGLTLSKK"
     gene            complement(13279..14502)
                     /locus_tag="WIX18_000827"
     CDS             complement(13279..14502)
                     /locus_tag="WIX18_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar MFS transporter"
                     /protein_id="HEZ5237968.1"
                     /translation="MSAQSQNNHTSPLVVLTTLFFMMGFITCMNDILIPHLKEIFDLS
                     YVQAMLIQFCFFTAYAVMSIPMGAFVGKVGYKNGVIGGFLLTAVGCLLFYPAAGSHSY
                     AVFLGALFILASGVTLLQVAGNPYVTLLAKPGKESATLTLVQAFNALGTTIAPQIGAF
                     LILADATQTVSKAEQISSVQIPYLGLAGLLIILAVFVKMIRLPDARKIAAEESAHNHD
                     GKTSVWQYKHLVFGTAGIFCYVGAEVSIGSLMVNVLGYLKGLDHASAAHYLSFYWGGA
                     MVGRFLGSAVMAKFAPNRYLAFNASAAVVLLAVAMATGSGNADVAMWSLLAIGFFNSI
                     MFPTIFSLATKGLGKFTNAASGVLCTAIVGGAVVPVVQGWVADTYTLMSSFVVSVICY
                     LYIVFFAVYGYRADK"
BASE COUNT         3537 a         4182 c         3833 g         3373 t
ORIGIN      
        1 gctgtaccga tttaaattta attcactata ccgtctgaca acccgtatcg caacacttca
       61 ttaaaaacgg caagattcag ccgttctgca acccgttcaa acggattccg ccatttccaa
      121 cgcctgtttg atgtccacgg cgacgacgcg cgatacgcct ttttcctgca tggttacacc
      181 gaccagctgt tccgccattt ccatggtcag gcggttgtgg gagatgtaga gaaactgggt
      241 ttgcgccgac atttctttga ccaggttgca gaaacgcgaa gtgttggcat cgtctagcgg
      301 agcgtcgact tcgtccaaaa gacagaacgg agcggggttg aggctgaaca gggcgaacac
      361 gaggctcatc gcggtaaggg ctttttcgcc gccggaaagg aggtggatgg tgctgttttt
      421 cttgccgggc gggcgcgcca tgatagacac gccggcggtc aaaaggtcgt cgcctatcat
      481 tttgagggtg gcttcgccgc cgccgaacag ggtcgggaag aaggtttgga ctttgccgtt
      541 gacggcgtcg aaggtttctt tgaaacgcgc tttggttttg tcgtcgattt gggcgatggc
      601 ttcttccaaa agggtgatgg cggtctgcac gtcttcgctt tggctgcggt agtagccgtc
      661 gcgttcgcgc gcttcttcga gttcttgcag ggcggcgagg ttgaccgcgc cgagggcttc
      721 gatttgttgc gagaggctgc cgatgctgct gttcaatact ttcggcgatt ctttcgccaa
      781 cgcttcgagc gcatccaaat cggcggcgcg ttcggtcagg ttttgatggt agcgtttggc
      841 gttgatcagg gcttcctgtt gttgcaacag ggcggtttgg gtggcggcct gaagctgtgg
      901 caactgggtt tgcagggttt gtacgcgggc gtattgttcc ctaccctgct cctgaatctg
      961 cgtgagtttt tcctgcacgg cgatgtattc ttcgtccagc gtgtgtacgg attcggtcag
     1021 ctcgtcgagc ttgatgtgct gctcgtcgtt ttggaactcg gtttcatagg cgaggacaag
     1081 ctcttgctgg cgttcctgcc agtctagggt ttgctgttcg agtcgggcga tttgctgctg
     1141 gtagttttgt ttttgctggt tgagtttgtg gacggcgact tcggcaagcc catattggcg
     1201 gttggcttcc agcagggcaa gctgcgcctg tttcagacgg ccttgctgct cttggcggct
     1261 gtgtgcggcg gtttgctgct ggtgttcgag ttcggcggcg gcttcctgca aagtagcaat
     1321 gtcgtctgaa agcccgtcgg acgcgtgttg caacacggtc tgctcttccg ccaactgcgc
     1381 cagttcgcgc tcgatgtgtt cgcggcggat ttgcccttgg ttggtacgcg ccagaagttc
     1441 ggcggcgcgt tgctgcgctt ggctgtattg gcgcgtgtgc tgctgttgct gctgcatcag
     1501 gtttttatgc tgcacttcgg acgagcgcac ggcggcttcc gcctgtttga acgcggcttc
     1561 ggcggcagaa agttcggggg agaggttttc cagttcggac gcgatgccgt cgaggcgcgc
     1621 tttttgggca atcaggcttt cctgcgcggg tttggcatag agcaggacgc tgaccttatc
     1681 gacctgatgg ccttcgggcg tgagccagat ttgatgtgcg cccaaatcgt tttgatgcgc
     1741 gagggcgtaa ctcaaatcag gcgcacacaa tacgccgtcg agccagtggt gcaatgccgt
     1801 ctgaaacggc ggctgcgctt ggatttggtt cagcaatgcc tgtacgggca gggatttttt
     1861 gatgccgccg gagagaccgt ctgaaagcca cgccgcctgc ccctgcggca aaggttcggg
     1921 cggtacgaaa ccttgcggca cgtcgcgggc gtgcaggcgt tcggcaagga tgacggacag
     1981 ggcgtgctgc cactcagcag gcgcggtaat gtgttgccac agttgcggcg cggcggcgtg
     2041 gccggttgcc tgccagaaat cggctgcttc ctgctgttgc gacaggattt gcgacaacgc
     2101 ctgctgctgc gcctgcaagg tgatatgttg ctgcttcagg ctttggaagc ggtttgaggc
     2161 cgtctgaaac gcctcgcggg cggcgtgtaa ggcttcttcg gcggcgatga tttgttcttc
     2221 gtaatgctct tgccggcttt gcaacaaggc agcggcctcc tgcgcggcgg cggtttccgc
     2281 ttcgtcgggc aggttcaggg cttggttctc ctgtttcaga cggcctttgc gctcttcgtg
     2341 cttggcaacg gtttgttcgg catgggcaag ctgctgctgc ttcaacgcca gttcgcggcg
     2401 gatgcggttt gcctcgtcct gctgggtttg gaaggcggca ttgagcgcgg tttgggtttc
     2461 ttccaattcg ggcagacgct cttcgtgttc ggcaacctgc atcgcccact ccgccagctc
     2521 ggtttgcttt tcttcgacgt ataactcgtt ttcttcaagc tgcacgcgga tttgctgctg
     2581 ctcttgatga atacgctgca tctgcgcctg cgccgcctgc ttgtcgcgtt cgatgcgttg
     2641 gtgcaggttt tgctgatggc ggatttgttc ttccaaacgg gcaatctgct cgcgcaacac
     2701 gccgcgtttg ttgctcaatt catgcaccgc ctgttgctgc gactgttcgg cggtctgcaa
     2761 ggcgtgtact tcgtcgttta acgcctgaac ctgcgcggcg gtttcgtcct gctgcgcctg
     2821 caaagactga tgctgctcgg tcgccttgtc ggcggcggca agcgattgct gccattgggc
     2881 gtaatcgagc aaatcctgtt gccggttcaa ctgcgcggtc agggatttgt agcgttcggc
     2941 ggtttccgcc tgtttctcca gcttttccac ctgacgcgcc aattcgttct gcaaatcgcc
     3001 caaacgctgc aaatgctcgc gcgtgtcttt cagacggcct tccgtctcct tgcggcgttc
     3061 cttatatttg gacacacctg ccgcctcctc gatataggca cgcaactcct ccggccgcgc
     3121 ttcgatgatg cgcgaaatca tcccctgctc gataacggca taaccgcgcg cacccacgcc
     3181 cgtacccaaa aataaatcgg taatgtcgcg gcggcgcacg gtctgattgt tgatgaaata
     3241 agtcgattcg ccctgacgcg tcagctgccg cttgatgctc acctcggcat actgtcccca
     3301 cgcaccctgc aaactgtggt cgctgttgtc aaacaccagc tccaccgaag ccctcggcgc
     3361 aggacggcgc gtcgccgcac cgttaaaaat cacgtcctgc atactctcgc cacgaagctg
     3421 cttcgccgaa gcctcaccca acacccagcg caccgcgtca atcacattcg acttgccgca
     3481 accgttcggc ccgataaccg cgacaagctg ccccggaaca tgaatcgtgg tcgggtcggt
     3541 aaaagatttg aagccggaga gtttgatgtg ggtcaggcgc ataatggtcg gaaaaaataa
     3601 aaaagaagcg tattttaacg gaaatcccgc cgcaccaccc catatcttgc cggcaaaacc
     3661 ttaccgcatc ccgcacccgc gatgccgtct gaagccttca gacggcattt ttaacgcgcc
     3721 gaaccccggt tccgccaatg cccgatgctt ggcgcggcat ttgccgtatt gccccgccgc
     3781 cgggcgcgtt ataatccgcc acgacatccg cccgatttgg aaacctgcct atgaaacccg
     3841 cctatttcat ttccgacctg catttgagcg aaaagcagcc cgaactgacc gcgctgttgc
     3901 tgcgtttttt acgttcttcc gccgccgggc aggcgcggac gatttatatt ttgggcgatt
     3961 tgtttgattt ttgggtgggc gatgacgaag tttccgagtt gaatacttcg gttgcgcggg
     4021 aaatcaggaa attgtccgac aaaggcgttg ccgtgttctt cgtcaggggc aaccgcgact
     4081 tcctgatcgg tcaggatttt tgccggcagg cgggtatgac gctgctgccg gattactcgg
     4141 ttttggactt gttcggctgc aaaaccctca tctgccacgg agacacatta tgcaccgacg
     4201 acaaggcata ccaacgtttc cgcaaaatcg tgcatcggaa gcggctgcaa aaactgttcc
     4261 tgatgctgcc cctaaagtgg cgcacgcgcc ttgctgccaa aatcaggcgt gtcagcaaaa
     4321 tggaaaaaca ggtcaagccc gccgatatta tggatgtcaa tgccgccttt accgcgcggc
     4381 aggttcgcgc ctttaacgcg gaaaggctga tacacggaca cacccaccgc gagcatatcc
     4441 atcacgaaaa cggctttacc cgcatcgttt tgggcgactg gcataacgac tatgcttcaa
     4501 tcctccgcgt ggacggggac ggcgcggtat tcgtgccgct ggaaaaatgc tgaaaatgcc
     4561 gtctgaagcc tttcgggcgg ctttttttac acgccccttt cccacactcc ctccgccgca
     4621 tcatcaccat ccttaacccg cattaatagc cattatcgat aaaatgcttg accgattaca
     4681 taagattacg taaagtgtgc aaacgcataa taattggtct taccaattta tcttttaacc
     4741 aaaatatcgg gtgtacggga tttgaacgtc tttccaaacc tcgacgcgcc ttatgatgca
     4801 aatgcctaaa aaggattcgt tatggcactt ttcctcagca tattccccat cgtcctgctg
     4861 atttggctga tggtgaaaaa aaacagtatg ccctcctacg tcgcactgcc gattaccgca
     4921 gtgctgattt acgccatcaa acttttctac ttcggcgatg cgggcatgct gctcaacgcc
     4981 accgccgctt ccggcctcgt caaaacgctc acgccgatta ccgtgatttt cggcgcgatt
     5041 atgttcaacc gtatgatgga aaccacgggc tgcattgatg tcatccgcaa atggctggcg
     5101 accatcagcc ccaaccccgt agcgcaactg atgattatcg gctgggcttt tgcctttatg
     5161 attgaaggcg catccggctt cggcacgcct gccgcgattg ccgcgccgat tctgatgagc
     5221 ttgggcttca acccgttgaa agtggcgatt ttcactttgg tgatgaactc cgtccccgtc
     5281 tctttcggcg cggtcggtac gccgacctgg ttcggtttcg caccgctgaa cctgagtgcc
     5341 gaagacatcc tcgccatcgg caggcagacc ggcgtaatgc acttcttcgc aggtttcgtc
     5401 atccccgtca tcggcttggg cttcatcgta ccttggtctg aaatccgcaa aaacttgggc
     5461 ttcgtcgcca ttgccgtctt ctcctgcacc attccttatg tcgcattggc gatggtcaac
     5521 gaagaattcc cgtcgctcgt cgccggcgcg atcggcctga tggtgtccgt attcgccgcc
     5581 aaccaaggct ggggcttgag caaagaccac gccaaagacc cgaatgccga aaaagtgccg
     5641 ttcgcccaag tcgccaaagc actcgcccct ttgggtatgc tgatcggcat gctggtggtt
     5701 acgcgcatca aacagctcgg catcaaaggc attttgacca gcaaagaaga atggttcagc
     5761 ttccaactgc cgtttgattt gtccaaaatc accgtcagcg actccctgac gattaccttc
     5821 ggcaatattt tcggacaaga tgtcagcgcg tcttaccaaa cgctgtacgt cccggcttgg
     5881 attccgtttg tgctgaccgt ttggatttgc atcctgctgt ataaaaccaa attcaaagat
     5941 gcctggacga tttattccgt aactttcaat caaaccaaaa aaccgctgct tgccctgatg
     6001 ggcgcgctga ttatggttca gctgatgctg gtcggcggcg acaattcgat ggtgaaaatc
     6061 atcggtaagg aatttgccgc aatggcgggc gaacactggg tttatttctc gccgtatctg
     6121 ggcgcgatcg gtgcgttctt ctccggctcc aacaccgtgt ccaacctgac tttcggcccg
     6181 attcagcagc aaatcgcctt ggataccggc ctgtccgtta ccctgattct ggcgttgcag
     6241 tccgtcggcg gcgcgatggg caatatggtg tgcctcaaca acatcatcgc cgtatgtacc
     6301 gtattggatg tgaaaaattc cgaaggtgcg attatcaaga aaaccgttat cccgatggcg
     6361 atttacggcg tgattgccgt cgtcgcggca atgattttct tcctctaggc gaaacgccac
     6421 catccatagc ggcagcacgc ggggaacgga aaccgccgtt ccccgtctgg gcggcgcgtc
     6481 gggcagaatc ccggtgccgg aacagcccgc cccgccaaac aaatgccgtc tgaaaccgga
     6541 aaaggcttca gacggcattt ttccgccgtt tgcattcagg cgtaatgatg atgcggcatc
     6601 ttgccgtcaa ggcggtagcg cgtgccgcaa tacgggcagg caacgctgcc cgattctcct
     6661 tcgcacaaag gcaaaaacac tctcggatgc ccgttccact gctcgttgtc gggtcccgag
     6721 caatacagcg gcagattttc cggcaacacg gaaatttcct gcagattcag attgtccatt
     6781 tgattttcct ttgcgtggtt ggcgtgcgcc cattttacgc catcggcagg ctaaaggata
     6841 ttttcggcgc aaagccgcaa tccgctataa tccccacttt tcagacggca taccatgact
     6901 gcgcttaccc ttccggaaga catcctccaa caagaaccat ccgttctgct ctataccctc
     6961 gtttccgcct acctcgaaca caccgcccaa accggcgacg aatccctctc ctgcctgtcc
     7021 gacgaccagc acacgctgac cgcattctgc tacctcgaca gccaagtcga agaaggcggc
     7081 ttcgtgcaac tcatcgcctc cggttacggc gaatatattt tccgcaaccc gcttgccgac
     7141 agcctgcgcc gctggaaaat caaagccgtg ccgaaagtct tggacaaagc caaagccctc
     7201 tacgaacaac acggcgaaac catcgaaacg cttgccgacg aagggcggga catcccttcc
     7261 ctgcgcaaac agttccccga ctttgaagaa tgggacggcg catactacga agccgccgaa
     7321 caagacctgc ccctgcttgc agaacacata cggtcaaact gggaaacctt cgcccatatc
     7381 gggcaggcgt gattgcgtct gtttccagcc cgtgtaaaac agcgtaaaat cggcaaaccc
     7441 gaatgacctt ccgtccccat caaggagcaa gctatgttct tcaagcacat cgaagccgcc
     7501 cccgccgatc cgattctcgg tttgggcgaa gcattcaaag ccgaaacccg ccccgaaaaa
     7561 gtcaacctcg gcatcggcgt ttataaagac gcatccggcg cgacacccct cgtcaaagcc
     7621 gtcaaagaag ccgaaaaacg cctgttggaa agcgaaacca ccaaaaacta cctcaccatc
     7681 gacggtgttg ccgactacaa cgagcaaacc caaatcctgc tgtttggcaa agaccacgaa
     7741 atcatcgcca gccgccgcgc caaaacagcg caaagccttg gcggtacagg cgcattgcgt
     7801 attgcgaccg agtttgccaa acgtcagttg aacgcgcaaa ccatctggat ttccaatccg
     7861 acttggccaa accacaacgc catcgccaaa gcggtcggta tccaagacaa accttatcgt
     7921 tactatgatg ccgccaaaca cggtttggat tgggacggta tgattgaaga cttgagccaa
     7981 gcgcaaaaag gcgacatcgt cctgctgcac ggctgctgcc acaaccctac cggcatcgac
     8041 cctacgcccg aacaatggga aactctggca aaactttctg ccgaaaaagg ctggctgccg
     8101 ctgtttgact ttgcctacca aggcttcggc aacggtttgg aagaagatgc ctacggcttg
     8161 cgcgtgttct tgaaacacaa tacagaattg ctgattgcca gctcttattc caaaaacttc
     8221 ggtatgtaca acgagcgcgt cggcgcgttc actttggtgg ccgaagatga agaaacagca
     8281 gcccgcgccc acagccaagt caaaaccatc atccgtacct tgtattccaa cccggcttca
     8341 cacggtgcga acaccattgc gctggtgttg aaaaatgatg atttgaaagc acaatggatt
     8401 gccgaactcg atgaaatgcg cggccgcatc aaagccatgc gccaaaaatt tgtcgagttg
     8461 ctcaaagcca aaggtgcaag ccaaaacttt gatttcatta tcgaacaaaa cggtatgttc
     8521 tctttcagcg gattgactcc cgaacaagtc gaccgtttga aaaacgagtt tgccatttat
     8581 gccgtccgct ccggccgcat caacgttgcc ggcattaccg acgacaacat cgattatctg
     8641 tgcgaaagca tcgtgaaagt cttgtaaaac aaaagcgcat acgaaatgcc gtctgaacct
     8701 taaccagttc agacggcatc tgttttttgt taaaaaacaa taaaccataa caatttcaaa
     8761 caagctaaaa acatctataa aatcaaccca atatgatgaa ctcaaataaa aaatacgaat
     8821 atcatcattc tcaaattcaa aatttgaacg ccacagtatt atccgaagcc acaaaaacct
     8881 ttccgccgtc attcccgcgc aggcgggaat ccgggaaccc aatgctgcaa gaattgatta
     8941 gaaacaactg aaaccgagca aactggattc ccgcctgtgc gggaatgacg aaataaggcg
     9001 agtaaaactg atgaaacaaa ttgattaaaa acaataactt atattatttt atttaaattt
     9061 tcgataaaat caattttccg tattcaatac tgctccaatc aattcccgcg caccgtcgtc
     9121 cgccaatttc ttagcgacag cgcgtccgag cgcgtcggca tattcggcag gggcttgcgc
     9181 gtccgcctgc aaaatgaccg aaccgtcggg gtgtccgacc agtccgcgca aggtcagcaa
     9241 gccgttttct tccgtgcaat atgcggccaa aggcacttgg cagcttccgc ccaaagcgcg
     9301 cgccaaagcg cgttcggccg taacgcaggc gtgtgtggta tcgtggttta gcggttttaa
     9361 aacctcatac aaatcttcgc ggtgcgcggc aatttcgata cccaatgcgc cttgtccggc
     9421 ggcaggcagg ctgtcggatt ccgacaaaat catgcggatg cgtccgtcca attccagacg
     9481 ctgcaaaccg gcggcagcca agataattgc gtcgtattcg ccgttatcga gtttagacaa
     9541 acgggtttgc acattgccgc gcaaaggttt gataagcaaa tgcggatagc gcgcacgcaa
     9601 ctgggcttcg cggcgcaggc tggatgtgcc tacgacggcg cctttgggca tttcttccaa
     9661 acgcgcgtat tggttggaca caaacgcgtc aaacggattg gcgcgttcgc cgatggctgc
     9721 aagcgcgaaa ccttcaggca aatccatcgg cacatcttta atcgaatgca cggccaagtc
     9781 agcgcgcccg tcatataaag cctgttccaa ctctttgaca aacaagccct taccgccgac
     9841 ttttgacaaa gttttgtcca aaatctggtc gccgcgcgtg gtcatgccca aaatctcgac
     9901 ttcgcaatcg ggatacaggg ctttcagacg gccttggata tgctttgcct gccacatggc
     9961 aagcaggctt tcgcgactgg cgataacgag ttttttcggg ttcataatgg ttgcctgaaa
    10021 gatggaaaac ggcatgaagt ctatcatatt ttgggcggtc tttcagacgg catgagggtg
    10081 aatatgttat atttacgcct aaaaaccaaa ttttccggac aacatgaaac gcgccaaaca
    10141 atatcctttt ttatccttac agcgacaacg ttttcatctg aactttgaaa acgcttcttc
    10201 caccgccaac cttccgagcg aacgcgattt ctaccgctgg gcgtggtctg ccttgaaaaa
    10261 tgaataccgc cgcgccgaca tcagcctgat tcttctggac gaagaagaag cccgcgctta
    10321 caaccgcgac taccgcggca aagattacgc caccaatgta ttgagtttcg cgctcaacga
    10381 aggcgaaatc ctgccctgcc aagtttcgga aaaactgtac ggcgatttga ttatctgccc
    10441 gcaagtggtt ttgaaagaag ccgccgaaca gggcaaaacg cccgaacggc attttgccca
    10501 cctgaccata cacggcgttt tgcacctgat gggctacgac cacatcgaag acgatgaagc
    10561 cgaaataatg gaagccgaag aaatccgcct gatgctggcg gcaggcttcc ccaaccccta
    10621 ccaagaggac gaatattaaa atggacggta cgcagtcgaa acccaagttt ttcgaacgcc
    10681 tgatctcccg acttgccggc gagcccgact ccgccgaaga cgtattgacc ctgctgcgcc
    10741 aagcgcacga gcaggaagtt tttgatgcgg atacgctttt aaggttggaa aaagtcctcg
    10801 atttttccga tttggaagtg cgcgatgcca tgattacgcg cagccgtatg aacgttttaa
    10861 aagaaaacga cagcatcgag cgcatcaccg cctacgtcat cgataccgcc cattcgcgct
    10921 tccccgtcat cggcgaagac aaagacgaag ttttgggcat tttgcacgcc aaagacctgc
    10981 tcaaatatat gttcaacccc gagcagttcc acctgaaatc cgtcttgcgc cctgccgttt
    11041 tcgttcccga aggcaaatct ttgaccgccc ttttaaaaga gttccgcgaa cagcgcaacc
    11101 acatggcgat tgttatcgac gaatacggcg gcacgtcggg tttggtcacc tttgaagaca
    11161 tcatcgagca aatcgtcggc gaaatcgaag atgagtttga cgaagacgac agtgccgata
    11221 atatccacgc cgtttcttcc gaacgctggc gcatccacgc ggctaccgaa atcgaagaca
    11281 tcaatacctt cttcggcaca gaatacagca gcgaagaagc cgataccatc ggcggcctgg
    11341 tcattcaaga gttagggcat ctgcccgtac gcggcgaaaa agtccttatc ggcggtttgc
    11401 agttcaccgt cgcccgcgcc gacaaccgcc gcctgcacac gctgatggcg acccgcgtga
    11461 agtaagcaga gcctgcccgc accgccgttt ctgcacagtt taggatgacg gtacggacgt
    11521 tttctgtttc aatccgcccc atccgccaaa cataaaaatg ccgtctgaaa ccggaaaaca
    11581 ggttcagacg gcatttcgct tatccgctta ttttttgctc aaagtcagcc ccgtccagcc
    11641 gaacagaagc gtcagtgcca aactcaaata gcagaaaaag gcatacggca gatattccca
    11701 caccggcaca cccagcgcgt ggctgataaa tacgccgcac acgctccacg gaacaagcgg
    11761 gttgatgacc gtacccgcgt cttcgagcgt acgcgagagg ttgcgggaat gtagtccgag
    11821 cctgtcgtaa acgggtttga acgtttctcc cgaaagcagg atgctcaaat attgttcgcc
    11881 aatcaggaaa ttgaccccga ccgaagtcat ggcaacactg aacgtcgcgc gtccggcatt
    11941 cgtcaaaaag ctgcggacgg catccagcag ggaaggaatc gcgcccagcg caaacagcag
    12001 tccacccaaa ctcatcccga gaatcacgat ggtttgcgtg aaaaacatac tttccaaacc
    12061 gccgcgcgaa atcagtttgg caacatcttt aaacgcttcg ccttcgagtt tgtaaccgcc
    12121 gtaaaaccac gcgccgagct gacgcagatc gggcgtgctg tgcagatacg ttacggcaac
    12181 ggcggcaatg acggtaaaga gcatggcgac cacggcattg acgcgcatca atgccaaaac
    12241 gaccaacagt gcaaacggaa tcagcgaata gccgtgcacc aatcccgtgg cttcaagctg
    12301 gctgcggaag gattcgacgc cgttcaaatc ctgcgcggcg acattcggca aaagccaaag
    12361 catcagtgcc gcactaatga gccacgcggg gatggtggtg tacatcatat ttttgatgtg
    12421 ctcaaacaag tcgatgccga cgatggacgc ggaaatgccc gtggtgtcgg aaagcgggga
    12481 cattttgtcg ccaaaaaatg cgcccgaaac aatcgcgccc gccgtcatcg ccatatcggc
    12541 atgaaacgcc gccgccatcc ccataaaggc aacgccgacg gtggcgcagg tggtcaggct
    12601 gctgccgatg gacacgccga tgacggaaca cagcgcgaaa gcggaaaaat aaaaataagt
    12661 cggggaaatc agcccgaaac cgtaatacat cagcgtcgga atcgcaccgc tcatcatcag
    12721 cgcgctgacc atcagcccga tgaagaaaaa caggtaaatc gcgcccatac cctgattcaa
    12781 cgcgcctatc atgccctgct gcatatcgtt gtatttcaaa ccgcgcgcca agccgtacaa
    12841 aatcagcacg acgatggcgg caataatgga catatgcggc agccactcca atgaaatgat
    12901 ggtatagccc atcgcggcaa tcagagcgac gacgacggca agtgcctcac cgcgcggcat
    12961 atcgagtaag gatttgaaag caaacatgat tctttgcccg atttgatata aagttaacgg
    13021 attctaacac accataccga atccgcccaa cgttttcaga cggcatttta gcgttttaca
    13081 aaagccggac agaaacaaaa cggcaatttt ctcaatttaa attaattttt tttgaaatat
    13141 aattttttat ttttttgttt gttggcatat aagactttta tggattgaaa tattaaaacc
    13201 tcggcacaca cgccgcaaac accggtacgc aaaaatgccg tctgaaagat gttcagacga
    13261 catttctcaa gaaaaagatt atttgtccgc cctatatccg tacaccgcaa aaaacacgat
    13321 atacagataa cagatgacgg aaacgacaaa cgaagacatc agggtgtaag tatctgccac
    13381 ccagccctgc acgacaggaa cgaccgcacc gccgacaatc gcggtacaca gtacaccgga
    13441 agccgcgttg gtaaattttc ccaatccttt ggttgccaaa gagaaaatcg tcgggaacat
    13501 aatcgagttg aaaaaaccga tggcaagcag cgaccacatc gccacatccg cattgccgct
    13561 acccgtcgcc atcgcgacgg caagcagtac gaccgcagcc gatgcgttaa acgccaaata
    13621 acggttgggc gcgaatttcg ccatcaccgc cgaaccgagg aaacgtccga ccatcgcgcc
    13681 gccccaatag aacgacaggt aatgcgcggc agaagcatga tccagccctt tcagataacc
    13741 caatacgttg accatcaacg aaccgataga cacctccgcg ccgacatagc agaaaatgcc
    13801 tgccgtaccg aacacgagat gtttgtattg ccatacgctg gttttgccgt cgtggttgtg
    13861 cgcgctttcc tcggcggcaa ttttgcgcgc gtcgggcagc cggatcattt tcacgaaaac
    13921 ggcaaggata atcagcagcc ccgccagtcc caaataggga atctgtacgg aagaaatctg
    13981 ttccgccttg ctgacggttt gggttgcgtc cgccaaaatc aggaacgcgc cgatttgcgg
    14041 cgcaatggtc gtacccaaag cgttaaacgc ctgaaccagc gtcagtgttg ccgattcctt
    14101 gccgggtttc gccagcaggg taacataagg attaccggca acctgaagca gcgttacgcc
    14161 ggaagccaaa ataaacaacg cgcccaaaaa taccgcgtaa gaatggctgc ccgcagcagg
    14221 ataaaacagc aggcatccga ccgccgtcag cagaaagccg ccgataacgc cgtttttgta
    14281 gccgactttg ccgacaaaag cccccatcgg gatggacatc accgcatagg cggtaaagaa
    14341 acagaattgg atcagcatcg cctgaacgta agacaggtcg aaaatttctt tcaaatgagg
    14401 gataaggatg tcgttcatgc aggtaataaa acccatcatg aagaacagcg tggtcaagac
    14461 gaccaatggg gacgtatgat tgttttgtga ttgcgcagac atgatttgcc tttcgtggtg
    14521 tcggaatatt acccgtttca agaaaataga aattgacatt tcttaacggc aatgcaaatc
    14581 atactgatat ttgaacattt tgcaaacttt atcggatgca ggcaatgcgc cgatctgaaa
    14641 ttcaagcagc agaaattaat attttacagt tgcttgcata gattttaata gattttaaaa
    14701 aattccggcg gacttgcaaa aaccgttccc aataaaatga aaatccgccg ccgtatccgg
    14761 aaaattcgga aatgccgcat cgtggcatca aaaccggagc ggaaagaatg tcgtatgccc
    14821 gacaaaaaag gggcatacgg ctgtgccgta ttttttgcac cgtcctccgc ccttcggcgg
    14881 gggcgtgaaa atatagtgga ttaacaaaaa tcaggacaag gcgac
//
LOCUS       DAWITQ010000033        14890 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.033, whole genome shotgun sequence.
ACCESSION   DAWITQ010000033 DAWITQ010000000
VERSION     DAWITQ010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14890)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14890)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14890
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.033"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            23..1126
                     /locus_tag="WIX18_000828"
     CDS             23..1126
                     /locus_tag="WIX18_000828"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEZ5237969.1"
                     /translation="MLILQAERDSLLKPLQAVTGIVERRHTLPILSNVLIEGKGGQTK
                     LLATDLEIQIDTAGPEGGADDFRITTNAKKFQDILRALPAGALVSLDWDDSRLTLKAG
                     KSRFALQTLPAADFPMMNVGEDISATFSLEQERFKTMLSQVQYSMAVQDIRYYLNGLL
                     MQVEGSQLRLVATDGHRLAYAACAIDADLPRAEVILPRKTVLELFKLLNNPDDPIQIE
                     LLDKQVRFQCNGTTIVSKVIDGKFPDFNRVIPLDNDKIFVLSRAELLGALERVSILAN
                     EKFRGARLFLQSGLLSVVCSNNEQEEAREEIEIAYQGGELEVGFNIGYLMDVLRNIHS
                     DDMQLAFGDANRSTLFTVPNNPNFKYIVMPMRI"
     gene            complement(1095..1364)
                     /locus_tag="WIX18_000829"
     CDS             complement(1095..1364)
                     /locus_tag="WIX18_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237970.1"
                     /translation="MPSETFPFQTAWFYSNLNRADWNQKHTFAIPAQALPLYAPNPNP
                     PHSRRHCLSDSRTKPRIRLHGSGHISNTGIVLRKTVKSASASQYI"
     gene            complement(1389..3446)
                     /gene="ppk1"
                     /locus_tag="WIX18_000830"
     CDS             complement(1389..3446)
                     /gene="ppk1"
                     /locus_tag="WIX18_000830"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HEZ5237971.1"
                     /translation="MPEQNRILCRELSLLAFNRRVLAQAEDKNVPLLERLRFLCIVSS
                     NLDEFFEVRMAWLKRENKLHPRRRLDNGKMPSETIADVTEAARSLIRHQYDLFNNVLQ
                     PELARESIHFYRRRNWTGAQKKWIEDYFDRELLPILTPIGLDPSHPFPRPLNKSLNFA
                     VELDGTDAFGRPSGMAIVQAPRILPRVVPLPSELCGGGHGFVFLSSILHAHVGKLFPG
                     MNVKGCHQFRLTRDSDLNVDEEDVQNLRAAVQNELHDREYGDGVRLEVADTCPARIRD
                     FLLSQFRLTADELYQVKGPVNLVRLNAVPDLVNRPDLKFPPHTPGRLKALGKTASIFD
                     LVRQSPILLHHPYQSFDPVVEMMREAAADPAVLAVKMTIYRTGTRSELVRALMKAALA
                     GKQVTVVVELMARFDEANNVNWAKQLEEAGAHVVYGVFGYKIHAKMALVIRREDGVLK
                     RYAHLGTGNYHQGTSRIYTDFGIITADEQITADVNTLFMEITGLGKPGRLNKLYQSPF
                     TLHKMVIGRIRQETEHAKAGKPARITAKMNSLIEPTVIEALYRASAAGVQIDLIVRGM
                     CTLRPGVKGLSENIRVRSIVGRQLEHARVYCFHNNGADDTFISSADWMGRNFFRRIET
                     AAPITAPELKKRVIREGLEMALADNTHAWLMQPDGGYIRAAPAEGESEADLQNDLWTL
                     LGG"
     gene            complement(3615..4058)
                     /locus_tag="WIX18_000831"
     CDS             complement(3615..4058)
                     /locus_tag="WIX18_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HEZ5237972.1"
                     /translation="MPFRLFLGILCGLSMVAPVYAQGQPDAINAYIQKKKVIVDTSKA
                     ELCFADDRQCHPVLIGVATPKGTFGLTLNSTDKPGYGGEVIGFKQEGDFLFALHRVWN
                     QIPSERRNERIASPSVSDRIMTNGCINVSDAVYEKLRHYFVLEVI"
     gene            complement(4065..4580)
                     /locus_tag="WIX18_000832"
     CDS             complement(4065..4580)
                     /locus_tag="WIX18_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HEZ5237973.1"
                     /translation="MKIKQIVKPGLAVLAAGVLSACATKSNVKADGTTDNPVFPKPYS
                     VTLDNKRGTFPTYDELDQMRPGLTKDDIYKILGRPHYDEGMYGVREWDYLFHFHTPGV
                     GIDPENTSGVEDVTTCQYKVIFDKDKFARSFYWNPVFPKDAACPPPAPKAEPQVIIRE
                     IVPAKPKRIRQ"
     gene            4850..7480
                     /locus_tag="WIX18_000833"
     CDS             4850..7480
                     /locus_tag="WIX18_000833"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEZ5237974.1"
                     /translation="MQEQYQPAAIEPAAQKKWDDARIFNVSEDASKPKYYCLSMFPYP
                     SGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAMKNNVAPAAWTY
                     DNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWDP
                     VDQTVLANEQVIDGRGWRSGALIEKREIPMYYFKITDYAEELLNDLDKLEHWPEQVKT
                     MQRNWIGKSRGMTVRFAVSDDSKQGLEGDYAKFLQVYTTRPDTLMGATYVAVAAEHPL
                     ATAAAADKPELQEFIAECKAGSVAEADMATMEKKGVPTGRYVVNPLNGDKLEVWIANY
                     VLWGYGDGAVMAVPAHDERDFEFATKYNLPKKQVIAVGDNAFDENQWQEWYGDKENGV
                     LVNSGDLDGLDFQTAFDAVAAKLQSQGAGEPKTQYRLRDWGISRQRYWGCPIPIVHCE
                     QCGDVPVPADQLPVVLPENVVPDGMGSPLAKMPEFYETACPCCGGAAKRETDTMDTFM
                     ESSWYFFRYMSPKFSDGMVDPAAAKYWGAVDQYIGGIEHAILHLLYARFFTKLMRDEG
                     LVNVDEPFERLLTQGMVVCETYYRENDKGGKDWINPADVELTFDDKGRPISAVLKADG
                     LPVVISGTEKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEGAH
                     RFLRRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQF
                     NTAIAAVMELLNQYDKTDTGGEQGRAVAQEVLETAVRLLWPIVPHICETLWSELNGAK
                     LWEAGWPTVDEAALVKSEIEVMVQVNGKLRGKITVAADASKADLEAAALATEGAVKFM
                     EGKPAKKIIVVPGRLVNIVV"
     gene            7710..8501
                     /locus_tag="WIX18_000834"
     CDS             7710..8501
                     /locus_tag="WIX18_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003761076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HEZ5237975.1"
                     /translation="MNLFFDTKLGKQQNKATHKIRVMSEAWLEKNGYCPCCGSKPMQR
                     FANNKPVADLFCSNCHEQYELKSKNQKTIGNSVPDGAYRTMLERIRSDTNPNFFFLAY
                     KKADYSIRQLVLVPKHFITPDMIIPRNKGIKNRPHHIMCSINLAPLPESGKIFLIDDS
                     RIIEPETVLKKWQSNLFLRNQNAERKGWLLAVMKCIDQLPEEFTLSQIYEFENKLSIQ
                     FPQNNHIRDKIRQQLQILRDQNTIEFIGRGLYKKIDKLPPTSKAF"
     gene            8631..8762
                     /locus_tag="WIX18_000835"
     CDS             8631..8762
                     /locus_tag="WIX18_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl-tRNA synthetase"
                     /protein_id="HEZ5237976.1"
                     /translation="MRNFDKLAEEAAEHAAEGAVKFIDGKPAKKIIAVPGRLANIVV"
     gene            8785..9719
                     /locus_tag="WIX18_000836"
                     /pseudo
     CDS             8785..9719
                     /locus_tag="WIX18_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225798.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
     gene            complement(10102..10413)
                     /locus_tag="WIX18_000837"
     CDS             complement(10102..10413)
                     /locus_tag="WIX18_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
                     /protein_id="HEZ5237977.1"
                     /translation="MKYKSEALAAIHEMMEGAYNIGAIDKKTMRGFDKSCLTEIKPLS
                     GGDIKAIREKEALSQAAFAIYLNVGKNHVSAWERGVKKPSGAALKLLTIVKNKGIEAI
                     A"
     gene            complement(10410..10778)
                     /locus_tag="WIX18_000838"
     CDS             complement(10410..10778)
                     /locus_tag="WIX18_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEZ5237978.1"
                     /translation="MRIFKNQWIVKFAKKHKINDSELLEAVERADNGLIDADLGGGVI
                     KQRIARQGQGRSGGYRSLILFKQADRAFFVYAFAKNDRENISDKELDVYRKAAAYYLK
                     YTRAELAALKEDGIITEIES"
     gene            complement(11588..11673)
                     /locus_tag="WIX18_000839"
     tRNA            complement(11588..11673)
                     /locus_tag="WIX18_000839"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11637..11639),aa:Leu,seq:gag)
     gene            complement(11687..12037)
                     /gene="secG"
                     /locus_tag="WIX18_000840"
     CDS             complement(11687..12037)
                     /gene="secG"
                     /locus_tag="WIX18_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEZ5237979.1"
                     /translation="MEAFKTLIWIVNIISALAVIVLVLLQHGKGADAGATFGSGSGSA
                     QGVFGSAGNANFLSRSTAVAATFFFATCMAMVYIHTHTTKHGLDFSNVQQTQQAPKPV
                     SNTEPSAPVPQQQK"
     gene            complement(12044..12817)
                     /locus_tag="WIX18_000841"
     CDS             complement(12044..12817)
                     /locus_tag="WIX18_000841"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEZ5237980.1"
                     /translation="MYRQIGMWDQKWVIGNWKMNGRLQNNNALMHRFRILPTAERVLI
                     GLAAPTVYLLQLHNAMQIVLNNRILTCAQDVSRFPDNGAYTGEVSAEMLADTGTDIVL
                     IGHSERSLYFGEKNEIQRRKMENVLNVGLIPLLCVGESLEEREAGKEHEVIAHQLSIL
                     QGLDTKNIAVAYEPVWAIGTGKVATVEQIADMHAFIYKEILSLCGSDVKIRVLYGGSV
                     KADNAADIFAVPYVDGALVGGASLSYDSFTAIISAAQNA"
     gene            13001..13504
                     /locus_tag="WIX18_000842"
     CDS             13001..13504
                     /locus_tag="WIX18_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEZ5237981.1"
                     /translation="MHALHFSASDKAALYREVLPQIESVVADEADWVANLANTAAVLK
                     EAFGWFWVGFYLVDTRSDELVLAPFQGPLACTRIPFGRGVCGQAWAKGETVVVGDVNA
                     YPDHIACSSLSRSEIVVPLFSDGRCIGVLDADSEYLAQFDETDALYLGELAKILEKRF
                     EASRQAV"
     gene            13606..14262
                     /locus_tag="WIX18_000843"
     CDS             13606..14262
                     /locus_tag="WIX18_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HEZ5237982.1"
                     /translation="MDFEKARFNMVEQQIRPWDVLDFDVLDALAEIPRELFVDEDLQG
                     LAYADMALPLANGHKMLEPKVVARLAQGLKLTKNDTVLEIGTGSGYAAALLAKLAGRV
                     VSDDIDAEQQKRAKAVLDGLSLENIDYVQNNGLTELSAGAPFDAVYVGGAVNLVPEVL
                     KEQLKDGGRMAVIVGRKPVQRALLITRKGDVFEEKVLFDTLVAHLDDKDADPFGGFDF
                     "
     gene            14342..14665
                     /locus_tag="WIX18_000844"
     CDS             14342..14665
                     /locus_tag="WIX18_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HEZ5237983.1"
                     /translation="MDIVQLGPAELKAWMDEGRMFCLLDVRTDEETAVCSLPNALHIP
                     MNLIPLRQNELPDDVPLVVYCHHGIRSLHTAMYLADAGFENLYNLQGGIDAWAAEIDG
                     NMMRY"
BASE COUNT         3344 a         3725 c         4215 g         3606 t
ORIGIN      
        1 aaaccgattt aaaggagcga acatgttgat tttacaagcc gaacgcgaca gcctgctcaa
       61 gccgctgcaa gccgttaccg gcatcgtcga acgccgccac accctgccca tcctgtccaa
      121 cgtcctgatt gagggaaaag gcggtcagac caaactcttg gcaaccgatt tggaaatcca
      181 aatcgacact gcgggtcccg agggcggcgc ggacgacttc cgcatcacca ccaatgccaa
      241 gaaatttcag gacattttgc gcgcgctgcc tgccggtgcg ctggtgtcgc tggattggga
      301 cgacagccgt ctgacgctga aggcgggcaa atcgcgtttt gccctgcaga ccctgcctgc
      361 cgccgatttt ccgatgatga atgtcggcga ggacatcagc gcgactttct cgctggagca
      421 ggagcgtttc aaaaccatgc tgtcgcaagt gcagtacagc atggcggtgc aggacatccg
      481 ctattatctc aacggtctgc tgatgcaggt tgagggcagc cagttgcgcc ttgtggcgac
      541 cgacggacac cgccttgcct atgcagcctg cgcgattgat gcggatttgc cgcgcgccga
      601 agtgattttg ccgcgcaaaa cggtgctgga actgttcaaa ctgttgaaca accccgacga
      661 tccgattcaa atcgagctgc tggacaagca ggtgcgtttc caatgcaacg gcacgaccat
      721 cgtcagcaag gttatcgacg gcaaattccc cgatttcaac cgcgtcatcc ctttggacaa
      781 cgacaagatt ttcgttttgt cccgtgccga acttttgggc gcgctggaac gtgtgtccat
      841 tcttgccaac gaaaaattcc gtggcgcgcg cctgttcctg caatccggcc tgttgagcgt
      901 cgtgtgcagc aacaacgagc aggaagaagc gcgcgaagaa atcgagattg cctatcaggg
      961 cggcgaactc gaagtcggtt tcaatatcgg ctatctgatg gacgtgttgc gcaacatcca
     1021 ttccgacgat atgcagcttg ccttcggcga tgccaaccgc tcgacgctgt ttaccgtgcc
     1081 gaacaatccg aatttcaaat atattgtgat gccgatgcgg atttgacggt tttccggagc
     1141 acgatgcccg tattggagat atgccccgaa ccgtgcagac ggattcgggg ttttgttcgg
     1201 ctgtcggaaa ggcaatgccg tctggaatgc ggcggattgg ggttgggagc gtatagggga
     1261 agtgcttgtg cgggaatggc gaaggtgtgt ttttgattcc agtccgccct gtttagattg
     1321 ctgtaaaacc atgccgtctg aaacggaaag gtttcagacg gcatggtttt tgattggggc
     1381 ggtgcgggtc agcctccgag cagtgtccac aaatcgtttt gcaggtcggc ttcgctttcg
     1441 ccctcggcag gcgcggcgcg gatatagccg ccgtcgggct gcatcagcca ggcgtgggtg
     1501 ttgtctgcca atgccatttc caaaccttcg cggatcacgc gttttttgag ttcgggcgcg
     1561 gtaatcggcg cggcggtttc gatgcggcgg aagaagttgc gccccatcca atccgcgctg
     1621 gaaataaagg tatcgtccgc gccgttgttg tggaagcaat acacgcgcgc gtgttcgagc
     1681 tgcctgccga cgatggagcg gacgcggatg ttttcggaca agcctttcac gccggggcgc
     1741 agagtgcaca taccgcgcac aatcaaatcg atttgcacgc ctgccgcgct tgcccgatac
     1801 agggcttcga tgacggtcgg ttcgatgagc gaattcatct tggcagtaat ccgtgccggc
     1861 ttgcctgctt tggcgtgttc ggtttcctgc ctgatgcgtc cgataaccat tttgtgcagg
     1921 gtaaacgggc tttgatagag cttgttcaga cggccgggtt tgcccaaacc tgtgatttcc
     1981 ataaacaatg tgttcacatc ggcggtgatt tgttcgtcgg cggtaatgat gccgaagtcg
     2041 gtgtagatgc gcgatgtgcc ttggtggtag ttgcccgtgc cgaggtgggc gtaacgcttg
     2101 agcacgccgt cttcgcggcg gatgaccagt gccatcttgg cgtggatttt gtagccgaac
     2161 acgccgtaca cgacgtgcgc gcccgcctct tcgagctgct tcgcccagtt gacgttgttg
     2221 gcttcgtcaa aacgcgccat cagttcgacg acgacggtta cttgtttgcc ggcgagtgcc
     2281 gccttcatca gggcgcggac gagttcggag cgcgtgccgg tgcggtaaat cgtcattttg
     2341 acggcaagca cggcggggtc ggcggcggct tcgcgcatca tttcgacaac ggggtcgaag
     2401 gattggtagg ggtggtgcag caggatgggc gattggcgca ccaaatcgaa tatggacgcg
     2461 gttttgccca aggctttcag cctgcccggc gtgtgcggcg ggaatttcaa atcggggcgg
     2521 ttgaccaaat cggggacggc gttgaggcgc acgaggttca cggggccttt gacttggtaa
     2581 agttcgtcgg cggtcagcct gaattgcgac agcaggaagt cgcggatgcg ggcgggacag
     2641 gtgtcggcga cttcgaggcg cacgccgtcg ccgtattcgc ggtcgtgcaa ctcgttttga
     2701 acggcggcgc ggaggttttg cacgtcttct tcatcgacgt tcaagtcgct gtcgcgcgtc
     2761 aggcggaact ggtggcagcc tttgacgttc atgcccggga agagtttgcc gacgtgggcg
     2821 tgcaggatgg aggagaggaa gacgaagccg tgtccgccgc cacacagttc ggacggcagg
     2881 ggaacaacgc gcggcaggat gcgcggtgcc tgcacaatcg ccatccccga aggcctgccg
     2941 aacgcgtccg tgccgtcgag ttcgacggcg aagttgagcg atttgttcag cggtcgcggg
     3001 aaggggtggg acgggtcgag tccgatgggg gtcaggatcg gcagcagttc gcggtcgaaa
     3061 tagtcttcga tccatttttt ctgtgcgccc gtccagttgc ggcggcggta aaaatggatg
     3121 ctttcccgcg ccaactcggg ctgaaggacg ttgttgaaca ggtcgtactg gtgccgtatc
     3181 agggagcgcg ccgcttcggt aacgtcggcg atggtttcag acggcatttt gccgttgtcc
     3241 agcctgcgcc gggggtgcag cttgttttca cgcttgagcc acgccatgcg gacttcgaaa
     3301 aactcgtcaa gattggacga cacgatgcac aggaagcgca ggcgttccaa aagggggacg
     3361 tttttgtctt ccgcctgtgc caacacgcgg cggttgaatg ccagcaggct tagttcgcgg
     3421 cagaggatgc ggttttgttc gggcataagg ttctcccaaa gatggttgtt gttcggtcgg
     3481 agcgggcagg caatgccgtc tgaaggcttg gcggcatctg cgccggtttc agacggcatg
     3541 acgtggcgga cagcctgttt caggcatcgg ggcaatgtga aaacagatac cggcgcgtgc
     3601 ggtatccgtc tgtttcaaat cacttccaac acaaaataat gacgcagttt ttcgtacacc
     3661 gcatcgctga cgttgatgca gccgttggtc ataatcctgt cggacacgga cggggaggcg
     3721 atgcgttcgt tccgcctttc cgacggtatc tgattccaaa cgcggtgcag ggcgaaaaga
     3781 aaatcaccct cctgcttgaa accgatgact tcgccgccgt atccaggctt gtcggtactg
     3841 ttcagcgtca gcccgaacgt ccccttgggc gtggcaacac cgatgaggac ggggtggcac
     3901 tgacggtcgt cagcgaaaca gagttccgct ttggatgtat cgacgatgac ttttttcttt
     3961 tggatatagg cattgatcgc atccggttgc ccctgtgcat atacgggggc aaccattgac
     4021 aggccgcata atatccctaa aaacaggcgg aacggcatgt cggattattg gcggatacgt
     4081 ttcggttttg ccggcacgat ttcgcggatg atgacttgcg gctcggcttt gggtgcgggc
     4141 ggcggacagg cggcatcttt cgggaagacg gggttccagt agaagctgcg ggcaaatttg
     4201 tctttatcga aaatcacttt gtattggcag gtagtaacat cttctacgcc ggaagtgttt
     4261 tcagggtcga tacctacgcc cggggtatgg aagtggaaca ggtaatccca ttcgcgcacg
     4321 ccgtacatac cttcgtcgta atgcgggcgg cccaggattt tgtagatgtc gtctttggtc
     4381 aggccggggc gcatctgatc cagttcgtca taagtcggga atgtgccgcg cttgttgtcg
     4441 agcgttacgg aatagggttt cgggaaaacc ggattgtcgg tcgtgccgtc ggctttgacg
     4501 ttgcttttgg ttgcgcaggc agacagaacg cccgccgcca atactgccaa gcccggtttg
     4561 acgatttgtt tgattttcat atgcagaatc ctcttttacc cgatgcccgt ctgccttttg
     4621 ttcggaagag ccgcatcagg agagttttaa acatttgatt ttggtttgta atattagcat
     4681 aaaaaacgtg cgtatcaata aacgcggtat atttgtacgg catacggaat aatgcgcgtg
     4741 cgaatttacg catcctgccg gcaatctgcc gattcgccgc ttccggcaac ctgttataat
     4801 tgatgccgac tttatttttc caacgttttt aagcgaaaac agaatgacta tgcaagaaca
     4861 atatcaaccc gccgccatcg agcctgcggc gcagaaaaaa tgggacgacg cccgtatttt
     4921 caacgtctcc gaagacgctt ccaaacccaa atattattgc ctctccatgt tcccctatcc
     4981 cagcggcaag ctgcatatgg ggcatgtgcg caactacacc atcggcgatg tattgagccg
     5041 cttcaaactt ttaaacggct tcaacgtcat gcagcctatg ggttgggacg cgttcggcat
     5101 gccggcggaa aacgcggcga tgaaaaacaa cgtcgcccct gccgcttgga cgtacgataa
     5161 catcgaatac atgaaaaccc agctcaaaag cctgggtttt gcgattgact gggcgcgcga
     5221 aaccgcaacc tgcaaacccg aatactaccg ctgggaacaa tggctgttta ccaagctgtt
     5281 tgaaaaaggc atcgtctatc gcaaaaacgg cacggtaaac tgggatccgg tcgaccaaac
     5341 cgtccttgcc aacgagcaag tcatcgacgg acgcggctgg cgttccggcg cattgatcga
     5401 aaaacgcgaa atcccgatgt attacttcaa aatcacggat tacgccgaag agctgctcaa
     5461 cgacttggac aagctggaac actggccgga acaagtcaaa accatgcagc gcaactggat
     5521 cggtaaatct cgcggcatga ccgtgcgctt cgccgtttca gacgacagca aacaaggttt
     5581 ggaaggcgat tacgcgaaat tcctgcaagt ttacaccacc cgccccgaca cgctgatggg
     5641 cgcgacttat gtcgccgttg ccgccgagca tccgctggca accgccgcag ccgccgacaa
     5701 acctgaattg caagagttta tcgccgaatg caaagccggc tcggtcgccg aagccgatat
     5761 ggcgacgatg gagaaaaaag gcgtgccgac cggccgctac gtcgtcaacc cgctcaacgg
     5821 cgacaagctg gaagtgtgga ttgccaacta tgtattgtgg ggctacggcg acggcgcggt
     5881 gatggcggtt ccggcgcacg acgaacgcga ttttgagttc gccaccaaat acaatctgcc
     5941 gaaaaaacaa gtcattgccg tcggcgacaa cgcatttgac gaaaaccaat ggcaagaatg
     6001 gtacggcgac aaagaaaacg gcgtattggt caacagcggc gacttggacg gcttggattt
     6061 tcagacggca ttcgacgccg tcgccgccaa gctgcaaagc caaggcgcgg gcgaaccgaa
     6121 aacccaatac cgcctgcgcg actggggcat ttcgcgccaa cgctactggg gctgcccgat
     6181 tcccatcgtc cattgcgaac aatgcggcga cgtacccgtc cctgccgacc aattgccggt
     6241 cgttttgcct gaaaacgtcg tacccgacgg catgggttcg ccgctggcaa aaatgcccga
     6301 gttttacgaa actgcctgcc catgctgcgg cggcgcggcg aaacgcgaaa ccgacaccat
     6361 ggacaccttc atggaatcga gctggtattt cttccgctac atgtcgccaa aattttcaga
     6421 cggcatggtc gatcctgccg ccgcgaaata ctggggcgcg gtcgaccaat acatcggcgg
     6481 catcgaacac gcgattttgc acctcttgta cgcgcgtttc ttcaccaaac tgatgcgcga
     6541 cgaaggtcta gtcaatgttg acgaaccgtt tgaacgcctg ctgacgcaag gcatggtcgt
     6601 ttgcgaaacc tactaccgcg aaaacgacaa aggcggcaaa gattggatca accccgccga
     6661 tgtcgagctg acgttcgacg acaaaggccg ccccatttcc gccgtcctca aagccgacgg
     6721 gctgcccgtc gtcatcagcg gcacggaaaa aatgtccaag tccaaaaaca acggcgtcga
     6781 tccgcaagaa ctgattaacg cctacggcgc ggacaccgcc cgcctgttta tgatgttcgc
     6841 cgcaccgccc gaacagtccc tcgaatggag cgacagcggc gtcgaaggcg cacaccgctt
     6901 cctgcgccgc ctgtggcgta ccgtttacga atacttgaag caaggcgaag cggtcaaagc
     6961 gttcgcaggc agccaagacg gtttgtctaa agaactcaaa gacctgcgcc acaaactgca
     7021 cgcgaccact gccaaagtca gcgacgacta cggccgccgc cagcagttca acaccgccat
     7081 cgccgccgtg atggaattgc tcaaccaata cgacaaaacc gacaccggcg gcgaacaagg
     7141 acgcgccgtc gcccaagaag tattggaaac cgccgtacgc ctgttgtggc ccatcgtgcc
     7201 gcacatctgc gaaaccctgt ggagcgaatt gaacggcgcg aaactgtggg aagcaggctg
     7261 gccgacagtc gacgaagccg ccttggtcaa atccgaaatc gaagtgatgg ttcaagtcaa
     7321 cggcaaactg cgcggcaaaa tcaccgtcgc cgccgacgcc tccaaagccg acctcgaagc
     7381 cgccgccctt gccactgaag gcgcggtgaa attcatggaa ggcaagcccg cgaagaaaat
     7441 catcgtcgta ccgggcagac tggtgaacat cgtcgtctaa accgctctta aggtttagcc
     7501 acacggataa aggccgtctg aaacttggaa acagggtttc agacggcctt tttaaggcag
     7561 attgggttgt ctgcattaca gacctcaaat atagtggatt aactttaaac cggtacgacg
     7621 ttgccccgcc ttgccctgct gtctgcggct tcgtcgcctt gtcctgattt ttgttaatcc
     7681 actaaaactg aaatctcaaa atccaaaaca tgaatttatt tttcgatacc aaattgggaa
     7741 agcaacaaaa taaagcaacc cataaaatcc gtgtaatgag tgaggcttgg ctggaaaaaa
     7801 acggctactg cccctgttgc ggaagcaagc cgatgcagag atttgccaat aacaaacctg
     7861 ttgcagacct cttttgctca aattgccacg agcaatatga attaaagagt aaaaatcaaa
     7921 aaaccatagg taacagtgtg cctgacggtg catatcgcac tatgttggag cgcatccggt
     7981 cagataccaa ccccaacttt ttctttcttg catataaaaa agcggattac tctatacggc
     8041 aattggtgct tgtacccaaa catttcatca cgccggacat gattattccc agaaataaag
     8101 gcattaaaaa ccggccgcac cacattatgt gttccatcaa tctcgcccct ttgcccgaaa
     8161 gcggcaaaat attcttaata gacgattccc gcattatcga acccgaaacc gttctgaaaa
     8221 aatggcaatc caatctgttt ttacgcaacc aaaatgcgga gcgcaaaggc tggcttttgg
     8281 ctgttatgaa atgtatcgac caacttcccg aagaattcac attgtcgcaa atatatgaat
     8341 ttgaaaacaa actatccatc caatttcccc aaaacaacca tatcagagac aaaatccgcc
     8401 aacagttgca aattttgcgc gaccaaaata cgatcgaatt cattggtcgc ggactttaca
     8461 aaaaaatcga caaattgccc ccgacttcca aggcgtttta atttcaaatc atgatactga
     8521 attcacaagg gatatttatt cttctgctat tctgaaaaca gttgaagtac agcgcaatat
     8581 tgccgcaaaa ggcagcagcc gtaaaaaagt cggggaatta ttggcaattt atgcgtaatt
     8641 tcgacaaatt ggctgaagaa gctgccgaac acgccgctga aggcgcggtg aaattcatag
     8701 acggcaagcc tgccaagaaa atcatcgccg taccgggcag actggcgaac atcgtggtgt
     8761 aaatcttttt aaaaacatca aacaatgtta agatgccgtc cgaaatccgt tttagattca
     8821 gacggcattt tttaaattta attttttaag gggtaagcct aatatgaaat ttccttcctt
     8881 ccttccttcc ttcctttaaa cggatactct gcctgtcggc agtaatctcg gtattggggg
     8941 cttgtacggt cgttgctgat gtttacggtc aggattccgc cacaatgaac gctgcggctg
     9001 ccaaagatta tatgaaaacg gttgagttga acaagtctgc cggcaatgtc gataccacat
     9061 ccagaacagc ccgcagggtg caggcagtat ttcgacgtat gctgccttat gccgatgcgg
     9121 caaataatac cggccatagg tttgactgga aaatgacggt tttcaaaaac gatgagctga
     9181 acgcgtgggc gatgcccggt ggaaaaatgg cgttttatac ggggatagtc gacaaactca
     9241 agctgaccga tgacgaaatt gccgccatta tggggcatga aatgacgcac gccctgcatg
     9301 aacacggtaa aaataaggtc gggcagcaaa tcttgaccaa tacggcggcg cagataggca
     9361 cgcagattat attagacaaa aaaccggata ctaatccgga attggtcgga ttgggtatgg
     9421 atattttggg gacgtacggt cttaccttgc cttatagccg cagcttggaa gaagaagccg
     9481 atgagggggg aatgatgttg atggcgcagg caggctatca tccggcggcc gctgtcaggg
     9541 tttgggaaaa aatgaatcag gaaaacgacc aaaacggctt tatttatgct attacctcta
     9601 ctcatccgac aaacaatgcc cgtatagaaa atctaaaacg gttgttgccg accgttatgc
     9661 cggtttatga gcaaagtgtc agaaataagg ggcgcgttaa taaaaaacgt cggcgttaag
     9721 ggaaggggat cgagaatttg agccattgtt tcaaaatgcc gtctgaaatc gtttgagatt
     9781 cagactgcat ttaaacagtt ctgtgcccca cccgttttgc cttcaagccc gcgccgctta
     9841 aatccaatcc ccccctgcaa cgggcgcaaa aaatccccgt acctcgcggt cggtgatgtt
     9901 tcgggtttcg cgcccgtctg cgccgtgcct tgctgtcggg ctatgtcgtc tgcaccgccg
     9961 ccgtttcggc ttggtttgat gcggtcgggc atttatgcgg ctacgccctg atattcagtt
    10021 cggcggtctt gcctgtcttg gcaggcatat tcagcagcgc gtctattgtg aacttgctga
    10081 ttttgccgtt tgccaagtcg gctacgcaat ggcttcgatg cccttgtttt tgacgatggt
    10141 cagcagcttc aacgccgcgc cgctcggctt tttaacgccc cgctcccaag ccgaaacgtg
    10201 attttttccc acgttgagat agatggcgaa agcggcttgc gatagtgcct ccttctccct
    10261 gattgccttg atgtccccgc cgctcaacgg tttgatttcg gtcaggcagg acttgtcaaa
    10321 gccgcgcata gtctttttgt cgattgcgcc gatgttgtaa gccccttcca tcatttcatg
    10381 aatggcggct aatgcctcgc ttttgtattt catgattcta tctccgtgat aatgccgtct
    10441 tctttcaaag ccgccagctc tgcccgcgtg tatttcagat aatatgcggc ggcttttcgg
    10501 taaacgtcca gttctttatc cgaaatgttt tccctgtcgt tcttggcaaa ggcgtaaacg
    10561 aaaaatgccc tatctgcctg tttgaacaat atcaggctgc gatagccgcc gcttctgcct
    10621 tgtccttgcc ttgctatgcg ctgcttaatc acaccgccgc ctaaatctgc gtctatcagc
    10681 ccgttatccg cccgctctac cgcttccagc agctcggaat cgttgatttt gtgcttcttg
    10741 gcaaatttca ctatccattg gtttttgaat atccgcattg tgtagccgtt gattagtgat
    10801 acttggaatt ataccagaga caggcaaggc ggcaagtcgc ctttttatac cctgcaattt
    10861 ctccgtttat gccgcctgaa acaccggcgg ctaacctgat tattttttaa tcaatcgctt
    10921 ttaatggctc aaattgcgtt tttagcgcgt ttcgctgtct tcctatgcca gtatataacc
    10981 aagcggttta accgccattc ctgctcaaaa taggcgcggt tccgtgcgtt ttggcttttc
    11041 attccgctac gctcccactg ccaagacggt gaaaaaccgg aaaaccccaa aagttgttac
    11101 cgattcgtta ccatttgtta ccgcatttgt taccaatttt ttatcttttt cttattttat
    11161 agtggattaa atttaaaccg gtacggcaag gcgaggcaac gccgtaccgg tttaaattta
    11221 atccactata gtataggttt tttccaaaaa cccaaaaaaa accgctctgc atcttggacg
    11281 gtttccccct cattccctac ggtgcgtcag tattccccgc aagctatttc ccgcttggca
    11341 ttcctgattt ggtggtcgtt cagctttatt tttgcggtat tttttcgagg tatttttcag
    11401 ataccgcaaa agataccgta aattttaggt tacttcaatt aggctgaatt aaacggaatt
    11461 atacaatcag gaagaagaca ataggatagc aaccagtctg aaagccttgt attgattggg
    11521 attggttgac ggcattagac aggattaaac gaaaaaaacg cttagaattt ctaagcgttt
    11581 tgtgtgttgg tgccgacagc gagatttgaa ctcgcacagc ctacggccac taccccctca
    11641 agatagcgtg tctaccaatt tcaccatgtc ggcatttgaa aaactgttat ttctgctgct
    11701 gaggaacagg ggcagaaggt tcggtattgc ttacgggttt gggtgcttgc tgagtttgtt
    11761 gtacgttgct gaagtccaaa ccgtgttttg ttgtgtgggt gtgaatatac accatagcca
    11821 tgcaggttgc aaagaaaaat gttgctgcaa cggcggtcga gcggctgagg aagttagcgt
    11881 tgccggcaga gccgaatacg ccttgcgcgc tgccgcttcc cgatccgaaa gtcgcgccgg
    11941 catccgcgcc tttgccgtgt tggagcaata ctaacacgat gacggccaaa gcggaaatta
    12001 tattaacaat ccaaattagg gttttgaagg cttccatatt tttctacgca ttttgtgcgg
    12061 cactgatgat ggcggtaaag gagtcgtacg acaatgacgc gccgccgacg agtgcgccgt
    12121 ccacataagg tactgcgaag atgtcggccg cgttgtccgc tttcacactt ccgccgtaaa
    12181 ggacgcggat tttaacatcg cttccgcaca aagacaagat ttctttgtag atgaatgcgt
    12241 gcatatcggc aatctgttcg acggtggcga ctttgccggt gccgattgcc cagacgggtt
    12301 cgtaggcgac ggcgatgttt ttggtgtcca gtccttggag gatggaaagc tgatgggcga
    12361 tgacttcgtg ttctttgccg gcttcgcgct cttcgaggct ttcgccgacg cacaataacg
    12421 ggatgagtcc gacgttgagg acgttttcca ttttgcggcg ttggatttcg tttttttcgc
    12481 cgaaataaag gctgcgttcg gagtgtccga tgaggacgat gtctgtgccg gtgtcggcga
    12541 gcatttcggc ggacacttcg ccggtgtacg cgccgttgtc ggggaagcgg ctcacgtctt
    12601 gggcgcaggt gaggatgcgg ttgtttaaga cgatttgcat ggcgttgtgc agttgcagca
    12661 ggtaaacggt cggggcggcg agtccgatga ggacgcgttc ggcggtgggg aggatgcgga
    12721 agcggtgcat cagtgcgttg ttgttttgga gccggccgtt cattttccag ttgccgatga
    12781 cccatttttg atcccacatt ccgatttggc gatacatctt ttttgctccg tgtcgtgttt
    12841 tttctgtctg ccgcgtgtgg cgcgttgcaa tgtgaagttt agtggatatg cggcgggttc
    12901 gcaacttggg gcgggcggct gcgggggcgg ttcggaatgt tgtttcgggc aggttgtttt
    12961 ataatggccg cctgatatgt atgcaactat aggagatgtg atgcacgcgc ttcatttttc
    13021 ggcttcggac aaggccgcgc tttatcggga ggtgttgccg cagattgagt ctgtggtggc
    13081 tgacgaggcg gattgggtgg cgaatttggc gaacacggcg gcggttttga aggaggcgtt
    13141 cggttggttt tgggtgggtt tttatttggt cgatacgcgt tcggacgaat tggttttggc
    13201 accgtttcag gggcctttgg cgtgtacgcg gattccgttc ggtcgcgggg tgtgcggtca
    13261 ggcttgggcg aagggagaga cggtggtcgt cggggatgtc aacgcgtatc ccgaccatat
    13321 tgcctgttcg tctttgtcgc gttcggagat tgtcgtgccg ctgttttcag acggccgctg
    13381 tatcggcgtg ttggacgcgg acagcgaata tttggcgcag tttgatgaga cagatgcttt
    13441 gtatttgggc gagctggcga agattttgga gaagcggttt gaggcttcgc gtcaggcggt
    13501 ttgagtgagg gaaaggggcg ggcggcgcgt gccgaagttg gcgcggcggg agtgtggttt
    13561 tataatgcct gctattgttg gaacaattat ttgacggagc actaaatgga ttttgaaaaa
    13621 gcgcggttca atatggtcga acagcaaatc cgtccttggg atgtattgga ttttgacgtt
    13681 ttggacgctt tggcggagat tccgcgcgag ctttttgtcg atgaggactt gcagggtttg
    13741 gcgtatgcgg atatggcgct gccgcttgcc aacgggcata agatgctcga gccgaaagtt
    13801 gtggcgcggc tggcgcaggg cttgaagctg acgaaaaacg atacggtttt ggaaatcggc
    13861 acgggatcgg gctatgcggc cgcgctgttg gcgaaactgg ctggtcgtgt ggtttcggac
    13921 gacatcgatg ccgaacagca aaagcgcgcc aaagcggttt tggacggctt gtctttggaa
    13981 aacattgatt atgtgcaaaa caacgggctg accgaacttt ccgcaggcgc gccgtttgat
    14041 gcggtttatg tcggcggcgc ggtaaacctt gtgcctgaag tgttgaaaga acagttgaaa
    14101 gatggcggac gcatggcggt tatcgtaggc cgcaagcctg ttcagcgcgc gcttttgatt
    14161 acgcgcaagg gcgatgtgtt tgaagagaag gtgctgttcg atactttggt ggcgcatttg
    14221 gatgataagg atgccgatcc gtttggcggt ttcgattttt aagatgttga caggtcatgc
    14281 cgtctgaaag cgggtttggg gcttcagacg gcattttgct tggttttttt gggggggtgc
    14341 gatggatatt gtgcaacttg ggcccgcgga attgaaagcg tggatggacg aagggcggat
    14401 gttttgtttg ttggacgtgc gtacggatga agaaacggcg gtttgttcgc tgccaaatgc
    14461 gctgcatatc ccgatgaatc tgattccgct gcggcagaac gagctgccgg atgatgtgcc
    14521 gcttgtggtg tattgccatc acggtatccg cagtctgcat acggcgatgt atttggcgga
    14581 cgcgggtttt gaaaacctgt acaaccttca gggcggcatc gatgcatggg cggccgagat
    14641 tgacggcaac atgatgcgtt attgaggcag gcatttcaga cggcattcct taaatgcgtg
    14701 tacctgtggt gttccaaaag gtcgtctgaa agtgcagctt ctgcgaagct aaagcgcggt
    14761 atcaacgaag ttaaaatttg cctgaacctt aaaggcagcc tgcaccccaa tcccctctcc
    14821 ccgtgggaga gggctaggac gaggctggca aactgaaagt ttgcttgggc ggcattttca
    14881 atgtgcaggc
//
LOCUS       DAWITQ010000034        14144 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.034, whole genome shotgun sequence.
ACCESSION   DAWITQ010000034 DAWITQ010000000
VERSION     DAWITQ010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14144)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14144)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14144
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.034"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(212..4381)
                     /locus_tag="WIX18_000845"
     CDS             complement(212..4381)
                     /locus_tag="WIX18_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB"
                     /protein_id="HEZ5237984.1"
                     /translation="MTDTAPTDTDPTENGTRKMPSEHRPAPPAKKRRPLLKLSAALLS
                     VLILAVCFLGWLASTEAGLRFGLYQIPSWFGVNISSQNLKGTLLDGFDGDNWSIETEG
                     ADLKISRFRFAWKPSELMRRSLHITEISAGDIAIVTKPTPPKEERPPQGLPDSIDLPA
                     AVYLDRFETGKISVGKTFDKQTVYLERLNAAYRYDRKGHRLDLKAADTPWSSSSGAAS
                     VGLKKPFALDTAIYTKGGLEGKTIHSTARLSGSLKDVRAELAIDGGNIRLSGKSVIHP
                     FAESLDKTLEEVLVKGFNINPSAFVPSLPDAGLNFDLTAIPSFSDGIALEGSLDLENT
                     KAGFADRNGIPVRQVLGSFVIRQDGTVHIGNTSVALLGRGGIRLSGKIDTEKDILDLN
                     IGINSVGAEDVLQTAFKGRLDGSIGIGGTTASPKISWQLGIGTARTDGSLAIASDPAN
                     GQRKLVLDTVNIAAGQGSLTAQGYLELFKDRLLKLDIRSRAFDPSRIDPQLPAGNING
                     SINLAGELAKEKFTGKMRFLPGTFNGVPIAGSADIVYESRHLPRAAVDLRLGRNIIKT
                     DGGFGKKGDRLNLNITAPDLSRFGFGLAGSLNVRGHLSGDLDGGIRTFETDLSGAARN
                     LHIGKAADIRSLDFTLKGSPDTSRPIRADIKGSRLSLSGGAAVVDTADLMLDGTGVQH
                     RIRTHAAMTLDGKPFKFDLDASGGINRELTRWKGSIGILDIGGAFNLKLQNRMTLEAG
                     AERVAASAANWQAMGGSLNLQHFSWDKKTGISAKGGAHGLHIAELHNFFKPPFEHNLV
                     LNGDWDVAYGRNARGYLNISRQSGDAVLPGGQALGLNAFSLKTRFQNDRIGILLDGGA
                     RFGRINADLDIGNAFGGNMANAPLGGRITASLPDLGTLKPFLPAAAQNITGSLNAAAQ
                     IGGRVGSPSVNAAVNVSSNYGKINGNITVGQSNSFSTSPLGGKLNLTVADAEVFRNFL
                     PVGQTVKGSLNAAVTLGGSIADPHLGGSINGDKLYYRNQTQGIILDNGSLRSHIAGRK
                     WVIDSLKFRHEGTAELSGTVGIENSGPDVDIGAVFDKYRILSRPNRRLTVSGNTRLRY
                     SPQKGISVTGMIKTDQGLFGSQKSSMPSVGDDVVVLGEVKKEAAAPLPVNMNLTLDLN
                     DGIRFAGYGADVTIGGKLTLTAQSGGSVRGVGTVRVIKGRYKAYGQDLDITKGTVSFV
                     GPLNDPNLNIRAERRLSPVGAGVEILGSLNSPRITLTANEPMSEKDKLSWLILNRAGS
                     GSSGDNAALSAAAGALLAGQINDRIGLVDDLGFTSKRSRNAQTGELNPAEQVLTVGKQ
                     LTGKLYIGYEYSISSAEQSVKLIYRLTRAIQAVARIGSRSSGGELTYTIRFDRFSGSD
                     KKDSAGNSKGK"
     gene            complement(4436..6265)
                     /locus_tag="WIX18_000846"
     CDS             complement(4436..6265)
                     /locus_tag="WIX18_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor"
                     /protein_id="HEZ5237985.1"
                     /translation="MMIKPTALLLPALFFFPHTYAPAADLSENKAAGFALFKNKSPDT
                     ESVKLKPKFPVRIDTQDSEIKDMVEEHLPLITQQQEEVLDKEQTGFLAEEAPDNVKTM
                     LHSKGYFSSKVSLTEKDGAYTVHITPGPRTKIANVGVAILGDILSDGNLAEYYRNALE
                     NWQQPVGSDFDQDSWENSKTSVLGAVTRKGYPLAKLGNTRAAVNPDTATVDLNVVVDS
                     GRPIAFGDFEITGTQRYPEQIVSGLARFQPGTPYDLDLLLDFQQALEQNGHYSGASVQ
                     ADFDRLQGDRVPVKVSVTEVKRHKLETGIRLDSEYGLGGKIAYDYYNLFNKGYIGSVV
                     WDMDKYETTLAAGISQPRNYRGNYWTSNVSYNRSTTQNLEKRAFSGGIWYVRDRAGID
                     ARLGAEFLAEGRKIPGSDIDLGNSHATMLTASWKRQLLNNVLHPENGHYLDGKIGTTL
                     GTFLSSTALIRTSARAGYFFTPENKKLGTFIIRGQAGYTLARDNADVPSGLMFRSGGA
                     SSVRGYELDSIGLAGPNGSVLPERALLVGSLEYQLPFTRTLSGAVFHDMGDAAANFKR
                     MKLKHGSGLGVRWFSPLAPFSFDIAYGHSDKKIRWHISLGTRF"
     gene            6695..7924
                     /gene="sstT"
                     /locus_tag="WIX18_000847"
     CDS             6695..7924
                     /gene="sstT"
                     /locus_tag="WIX18_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HEZ5237986.1"
                     /translation="MAFGKSLFHAIGRVSLVRQIAAGLALGIVIGSVSPQLGLAAGLF
                     GSLFVGALKAVAPVLVFILVAATIAQHQKGNKAHIRPIIVLYLIGTFSAALTAVIAGM
                     VFPTHIVLAGAGDVSAAPPSGIVEVLKSLLMNLVANPINAIANANYIGILAWALVLGA
                     ALRNHGSDVTRQVVADLAEAVSTVVKWIIRFAPLGIFGLVSSTIAETGFGALAGYAKL
                     LAVLLGCMAFIALVVNPAIVWWKIRRNPYPLVFTCLRESGVYAFFTRSSAANIPVNMA
                     LAKKLGLHEDTYSISIPLGATVNMGGAAITITVLAMAAAHTQGIQVDFATALLLSLVA
                     TVSACGASGVAGGSLLLIPLACSLFGISNDVAMQVVAVGFIIGVIQDSAETALNSSTD
                     VLFTAAADLGRQRNRAE"
     gene            8041..9504
                     /locus_tag="WIX18_000848"
     CDS             8041..9504
                     /locus_tag="WIX18_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HEZ5237987.1"
                     /translation="MFKRSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVSE
                     KETEAKEDAPQAGSQGQGAPSTQGSQDMAAVSAENTGNGGAATTDTPKNEDEGAQDDM
                     PQKAAGTDSLTPNHTPAPNMPAGDMGNQAPDNGESAQPANQPDAANAGDGIQGDDPSA
                     GENAGNTASAESANQTGNNQPAGSSDSAPASNPAPANGGSNFGRVDLANGIKLDSGSE
                     NVTLTHCKDTVCGSDFLDEEAPSKSEFESLSDEKKIEKYKKDGEKFTNLVATEVQANG
                     VNKYVIIYKDKSASSSSARFRRSARSRRSLPAEMPLIPVNQADTLIIDGEAVSLTGHS
                     GNIFAPEGNYRYLTYGAEKLSGGSYALRVQGEPAKGEMLAGTAVYNGEVLHFHMENGR
                     PSPSGGRFAAKVDFGSKSVDGIIDSGDDLHMGTQKFKAVIDGNGFKGTWTENGGGDVS
                     GKFYGPAGEEVAGKYSYRPTDAEKGGFGVFAGKKEQD"
     gene            complement(9579..9794)
                     /locus_tag="WIX18_000849"
     CDS             complement(9579..9794)
                     /locus_tag="WIX18_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5237988.1"
                     /translation="MFKLGVYACLGLFAGWVLLLIVQLWFSFLKAELFFKITLTMAGL
                     FVIILAALLVFGQYFSEKKMKDDGFIN"
     gene            complement(9787..10003)
                     /locus_tag="WIX18_000850"
                     /pseudo
     CDS             complement(9787..10003)
                     /locus_tag="WIX18_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242091.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4177 domain-containing protein"
     gene            complement(10078..11421)
                     /gene="argG"
                     /locus_tag="WIX18_000851"
     CDS             complement(10078..11421)
                     /gene="argG"
                     /locus_tag="WIX18_000851"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HEZ5237989.1"
                     /translation="MNQNHTILQNLPVGQKVGIAFSGGLDTSAALLWMKLKGALPYAY
                     TANLGQPDEDDYNAIPKKAMEYGAENARLIDCRAQLAHEGIAAIQCGAFHVSTGGIAY
                     FNTTPLGRAVTGTMLVSAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPALKIYKPW
                     LDQQFIDELGGRHEMSEFLIANGFNYKMSVEKAYSTDSNMLGATHEAKDLEFLNSGIK
                     IVKPIMGVAFWDENVEVSPEEVSVRFEEGVPVALNGKEYADPVELFLEANRIGGRHGL
                     GMSDQIENRIIEAKSRGIYEAPGMALFHIAYERLVTGIHNEDTIEQYRINGLRLGRLL
                     YQGRWFDSQALMLRETAQRWVAKAITGEVTLELRRGNDYSILNTESPNLTYQPERLSM
                     EKVEDAAFTPLDRIGQLTMRNLDITDTRAKLGIYSQSGLLALGEGSVLPQLGNKQ"
     gene            11546..12346
                     /locus_tag="WIX18_000852"
     CDS             11546..12346
                     /locus_tag="WIX18_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HEZ5237990.1"
                     /translation="MNAFNLIIIGDEILHGSRQDKHFVFFKSLLESKGLKLNQVQYLP
                     DEPDLLVRQLRRSFSDGIPTFVTGGIGATPDDHTRQAAAAALELPVVRHPEAAKFIEG
                     VTLKRGEPLDSPEHAQRLKMADFPEGAELVPNPFNNIAGFSIREHYFFPGFPVMAHPM
                     AEWVLDTYYVGRFNQTKRGSRSVYVFEQPESRITPLMEHIEQTYPGVRSYSLPSVGWT
                     HSDGTQVKPHIEFGIKAEGEAVNLLDAAWAEVLHSLDGLGAELKNRVN"
     gene            12386..13372
                     /locus_tag="WIX18_000853"
     CDS             12386..13372
                     /locus_tag="WIX18_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HEZ5237991.1"
                     /translation="MQYRIRRENEAPEAKNAGETLWERDIMREVLLSAYRDRRRERMW
                     KNIWRAVSTLILVALIAGIFQKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKD
                     GMEAAYKNPQAKAIIIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASG
                     CYYIAAAADKIYADPSSIIGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFS
                     PETPEQSKIWEEMLTGIHGEFIKAVKTGRGDRLKFRQYPDVFSGRVYTGADALKVGLV
                     DGLGNIYSVARDVVKAPDVVDYTPKDDFGRILGRRFGAELKASVREALQAVR"
     gene            14029..14144
                     /locus_tag="WIX18_000854"
                     /pseudo
     CDS             14029..14144
                     /locus_tag="WIX18_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248742.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT         2993 a         3616 c         4246 g         3289 t
ORIGIN      
        1 cttagctcaa agagaacgat tctctaaggt gctcaagcac cgagtgaatc ggttccgtac
       61 tatttgtact gtctgcggct tcgtcgcctt atcctgattt ttgttaattc actatatcga
      121 ttctgttccc ttgcaggcgg acggcggcgg cggacggtgg aaaagcaggt tttcaaatgt
      181 ccggtttggc ggcgcgccgt ctgaaaaccg cttattttcc tttgctgttt ccggcggagt
      241 cttttttgtc cgaaccggag aagcggtcga aacgtatggt gtatgtcagc tcgccgcccg
      301 acgaacggct accgatacgg gcaaccgcct gtatggcgcg ggtcagccgg taaatcagtt
      361 tgacggactg ttccgcgctg gagatgctgt attcgtagcc gatgtagagt ttgccggtca
      421 gttgtttgcc gacggtcagc acctgttcgg cggggttgag ttcgccggtt tgcgcgttgc
      481 ggctgcgctt gctggtaaag cccaaatcat ccaccagccc gatgcggtcg ttgatttgcc
      541 cggcaagcag cgcgccagcg gctgcggaca gggcggcatt gtcgccgctg ctgccactgc
      601 cggcgcggtt gaggatgagc caggagagct tgtctttttc actcatcggt tcgtttgccg
      661 tcagcgtaat gcgcggactg ttgaggctgc ccaatatttc cacgcccgca ccgacggggg
      721 aaaggcggcg ttcggcgcgg atgttgaggt tggggtcgtt gagcgggccg acaaaggaga
      781 ccgtgccttt ggtaatgtcc aaatcctgcc cgtatgcctt ataacgccct ttgatgacgc
      841 ggaccgtgcc cacgccccgc acgcttccgc ccgattgggc ggtcagggtc agtttgccgc
      901 ctatggtaac gtccgcgccg tagccggcga agcggatgcc gtcattgagg tctaaagtca
      961 ggttcatatt gacggggagc ggtgccgccg cctctttttt gacttcgcct aatacgacga
     1021 catcgtcgcc gacggacggc atcgaggatt tttgcgaacc gaacagcccc tgatccgttt
     1081 taatcatccc ggtaacggat atgccttttt gcggcgaata gcgcaggcgg gtgttgccgg
     1141 aaaccgtcag gcggcggttg gggcgggaca ggatgcggta tttgtcgaac accgcgccga
     1201 tatcgacatc gggtccgctg ttttctatac cgaccgtacc ggagagttcc gccgtccctt
     1261 cgtgccggaa tttcaggctg tcgattaccc atttcctgcc cgcgatatgc gaacgcagcg
     1321 agccgttgtc caagatgatg ccttgggttt ggttgcggta atagagtttg tcgccgttga
     1381 tgctgccgcc caagtgcgga tcggcgatgc tgccgccgag ggttacggcg gcattcaggc
     1441 tgcctttgac ggtttgtccg acgggcagga agttgcggaa tacttcggca tcggcaacgg
     1501 tcaggttgag tttcccgccc aggggcgagg tactgaaaga attactttgc ccgacggtga
     1561 tgttgccgtt gattttcccg tagttgctgc tgacgttgac ggcggcattg acggacggag
     1621 agccgacccg tccgccgatt tgcgcggcgg cattcaggct gccggtaatg ttttgcgcgg
     1681 cggcgggcag aaagggcttc aatgtgccca agtcgggaag ggaggcggta atcctgccgc
     1741 cgagcggtgc atttgccata ttgccgccga aggcgttgcc gatgtccaaa tcggcgttaa
     1801 tccgcccgaa acgcgcgccg ccgtcaagca ggattccgat acggtcgttt tgaaagcgcg
     1861 ttttcaggga aaatgcgttc aaacccaaag cctgcccgcc gggcaatacg gcatcgccgc
     1921 tttgccggct gatattgagg tagccgcgcg cgttgcgccc gtaggcaaca tcccagtcgc
     1981 cgtttaaaac cagattgtgt tcgaagggcg gtttgaagaa attgtgcaac tcggcgatat
     2041 gcagaccgtg tgcgccgcct tttgccgata tgccggtttt tttatcccaa gaaaagtgtt
     2101 gcaggttgag gctgccgccc attgcctgcc aatttgccgc acttgccgcc acgcgttccg
     2161 caccggcttc gagcgtcata cggttttgca gcttgaggtt gaatgcgccg ccgatgtcga
     2221 ggatgccgat gctgcctttc catcgggtaa gttccctgtt gatgccgcct gaagcgtcca
     2281 aatcgaattt gaacggtttg ccatccagcg tcatggcggc gtgtgtgcgg atgcggtgct
     2341 gcacgcccgt gccgtccagc atcaggtcgg cggtatcgac aaccgccgct ccgcccgaca
     2401 gcgaaaggcg gctgcctttg atgtcggcgc gtatcgggcg gcttgtgtcg ggcgaacctt
     2461 tgagcgtgaa atcgagcgaa cggatgtctg ccgccttgcc gatgtgcagg ttgcgcgccg
     2521 cgccggaaag gtcggtttca aaggttcgga tgccgccgtc caaatcaccg gaaaggtgtc
     2581 cgcgtacatt taaagacccc gcgagtccga aaccgaaacg ggataaatcg ggtgcggtga
     2641 tattgaggtt aagccggtcg ccttttttgc cgaagccgcc gtctgttttg atgatgttcc
     2701 gccccagccg caaatcgacg gcggcacgcg gaaggtggcg ggactcgtaa acaatgtcgg
     2761 cactgccggc aatcggtacg ccgttgaacg tgccgggtaa aaaccgcatt ttgcctgtga
     2821 atttctcttt tgccagttcg ccggcaaggt ttattgagcc gttgatattg cctgccggaa
     2881 gttgcggatc gatgcgcgaa gggtcgaatg cgcgggaacg gatgtccagc ttgagcaggc
     2941 ggtctttaaa cagctcgaga tagccttgcg cggtcaggct gccttgcccg gcggcgatgt
     3001 tgacggtgtc gagcaccagt ttccgctgtc cgtttgcggg gtcgcttgca atggcgaggc
     3061 tgccgtccgt gcgcgccgtg ccgatgccga gttgccaaga gattttgggc gaggcggtcg
     3121 tgccaccgat gccgatgctg ccgtccaacc tgcctttgaa cgcggtttgc agtacgtctt
     3181 ccgcgccgac ggagttgatg cctatattta aatcgaggat gtctttttcg gtgtcgattt
     3241 tgcccgacag cctgatgccg ccccgtccga gcagggcgac ggacgtattg ccgatatgca
     3301 ccgtgccgtc ctgccggatg acaaagctgc ctaaaacctg acggacgggg atgccgttgc
     3361 ggtcggcaaa gccggctttg gtgttttcca aatcgagcga gccttccagc gcgatgccgt
     3421 ctgaaaacga cgggatggcg gtcaggtcga aattcagccc ggcatcgggc agggaaggca
     3481 cgaaggcgga cggattgatg ttgaaccctt tgaccagtac ttcttccaat gttttatcca
     3541 atgattcggc aaacgggtgg atgacggatt ttcccgagag gcggatattg ccgccgtcga
     3601 tcgccagttc ggcgcgcaca tccttcaggc tgccgctcag ccgagccgta ctgtgtatgg
     3661 ttttgccttc gagtccgcct ttggtgtaaa tggcggtatc gagggcaaac ggttttttca
     3721 agccgaccga ggccgccccc gacgaactgc tccacggcgt gtcggcggcc ttcaggtcaa
     3781 ggcggtgtcc tttgcggtcg taacggtatg ccgcgttgag ccgttcgaga tagacggttt
     3841 gtttgtcaaa agttttgccg acgctgattt tgcccgtctc gaagcggtcg agatagacgg
     3901 cggcaggcag gtctatgctg tcgggcagac cttgaggcgg gcgttcttct ttaggcggag
     3961 tcggtttggt aacgatggcg atgtcgccgg cggaaatttc ggtgatgtgc aggctgcggc
     4021 gcatcagttc ggacggtttc cacgcgaagc ggaagcggct gattttaagg tctgccccct
     4081 cggtttctat cgaccagttg tcgccgtcga agccgtcgag cagcgtgcct ttgaggtttt
     4141 gggaggaaat gtttacgcca aaccaggacg ggatttggta cagcccgaag cgcaaacccg
     4201 cttccgtact ggcgagccag ccgaggaaac atactgccaa aatcaggaca gacagcagtg
     4261 ccgccgacag cttcagcagc gggcggcgtt tttttgccgg cggggcaggg cggtgttcag
     4321 acggcatttt gcgcgtgccg ttttcggtcg gatcggtatc tgtcggtgcg gtatcggtca
     4381 taatgtctgt ttcaaaatgg tttgctgcaa tgccgtctga agcggccgta tcggtttaga
     4441 agcgtgttcc caagctgatg tgccagcgga ttttcttatc gctgtgcccg taggcgatgt
     4501 cgaaggaaaa cggcgcaagc gggctgaacc agcgcacgcc cagtcccgaa ccgtgtttca
     4561 gcttcatacg tttgaaattg gcggcggcat cgcccatatc gtggaatacc gcgccggaaa
     4621 gggtgcgcgt aaacggcagt tggtattcca ggctgcccac caagagggcg cgttcgggca
     4681 ggaccgatcc gttcgggccg gcaagtccga tgctgtcgag ttcgtaaccg cgcacggaag
     4741 acgcgccacc gctgcggaac atcagccccg aggggacatc ggcattgtcg cgggcaaggg
     4801 tgtaacccgc ttgtccgcgt atgatgaacg tgccgagttt cttgttttcg ggcgtgaaga
     4861 aataacctgc gcgggcagag gtgcggatca gcgcggtgga ggacaggaat gtgcccaaag
     4921 tcgtaccgat tttgccgtcg aggtaatggc cgttttcggg atgcagcacg ttgttgagca
     4981 gctggcgttt ccaagaggcg gtcagcatcg tggcgtggct gttgcccaaa tcgatatccg
     5041 agccggggat tttccggcct tctgcgagaa actctgcccc cagcctggca tcgatgcccg
     5101 cgcggtcgcg cacataccag atgccgccgg agaaggcgcg tttttcgagg ttttgggtgg
     5161 tcgaacggtt gtaggaaacg ttgcttgtcc agtagttgcc ccgatagttg cgcggctggc
     5221 tgatgccggc ggcaagcgtg gtttcgtatt tgtccatatc ccagacgacc gagccgatat
     5281 agcctttgtt gaagaggttg taatagtcgt aggcgatttt gccgcccaaa ccgtattccg
     5341 aatcgaggcg gatgccggtt tcgagcttgt ggcgtttgac ctcggttacg ctgactttga
     5401 cggggacgcg gtcgccttgg agacggtcga agtcggcttg tacggacgcg ccggaataat
     5461 gcccgttttg ttcgagtgcc tgttggaagt cgagcagcag gtcgaggtcg tagggcgtgc
     5521 ccggttggaa gcgcgccagg ccggagacga tttgttcggg gtaacgctgt gtgccggtga
     5581 tttcaaagtc gccgaaggcg atggggcggc cgctgtccac gacgacgttc aaatcgacgg
     5641 tggcggtatc ggggttgacg gccgcccggg tgttgccgag cttggcaagc gggtagcctt
     5701 tgcgcgttac cgcgccgagg acggaagttt tgctgttttc ccaactgtcc tgatcgaaat
     5761 cactgcctac cggctgctgc cagttttcca gcgcgttgcg gtagtattcg gcgaggttgc
     5821 cgtctgaaag gatgtcgccg aggatggcga cgccgacgtt ggcgattttg gtgcgcgggc
     5881 ccggtgtgat gtgtaccgta taagctccgt ctttttccgt caggctgact ttgctgctga
     5941 aatagccttt gctgtggagc attgttttaa cgttgtccgg tgcttcttcg gcgaggaagc
     6001 ccgtctgttc cttgtccaat acttcttcct gctgctgcgt gatgagcggc aggtgttctt
     6061 cgaccatatc tttgatttca ctatcctgcg tgtcgatgcg gacggggaat ttgggtttta
     6121 atttaactga ttcggtgtcg gggcttttgt ttttgaacaa tgcgaaaccc gccgccttgt
     6181 tttcggaaag gtcggcggca ggcgcgtatg tgtgcggaaa gaaaaataaa gccggcagga
     6241 gcagggcggt cggtttaatc atcatggtac gggtgtcgtg cactcggtgt ggcagatttc
     6301 gattctaaca ctattcggac agggtttcga acggccgttt ttgtgttgtt cggacggggc
     6361 gggacgcttc agacggcata ctgccgccgg tatttcggag gttgcggccc gccggaaatg
     6421 tatctgcttg ttttagggta ttttgtttct aatccgtata tggaaaacag gctgcgtttc
     6481 ggaatagtgc cggaaaatag gcaggattaa ataaatttat tttcgttcaa taaattaaac
     6541 cgttgcgccg aatgataaag caaagcctgt ccggcactgc atagggcaaa tcaatgcaac
     6601 cttaaaacac agccgaaaaa taaaaaaaac acagagaatg agttttcttt taaaatacaa
     6661 cattttttaa catatcacaa cataaggaag aattatggcg ttcggcaaat ccttatttca
     6721 tgcgatcggc cgcgtcagcc tggtcaggca gattgccgcc ggtttggcgt tgggtatcgt
     6781 aatcggttcg gtttccccgc aactgggctt ggcggcaggc ttgttcggca gcctgtttgt
     6841 cggcgcgctc aaagcggtcg cgccggtttt ggtatttatt ttggtggcgg ccacaatcgc
     6901 gcagcaccaa aaaggcaaca aggcgcatat caggccgatt atcgtccttt acctcatcgg
     6961 tacgttttcc gcagccctga ccgccgtcat cgctggtatg gttttcccga cgcacattgt
     7021 tttggcgggc gcgggcgatg tgtccgccgc gccgccttcc ggcattgtgg aagtattgaa
     7081 atcgctgctg atgaacctgg tcgccaaccc gattaacgcg attgccaatg ccaactatat
     7141 cggcattttg gcttgggctt tggttttggg cgcggcgttg cggaatcacg gttcggacgt
     7201 tacgcggcag gtcgttgccg atttggcgga agcggtttcc accgtcgtga aatggattat
     7261 ccgttttgcc cctttgggca ttttcgggct ggtgtcgtcc acaatcgcgg agacgggttt
     7321 cggcgcgctg gcgggttatg cgaagctgct tgcggtactg ttgggctgta tggcgtttat
     7381 cgcgctggtg gtcaatcccg ccatcgtgtg gtggaaaatc cgccgcaacc cttatccgct
     7441 ggtgtttacc tgcctgcgcg aaagcggcgt gtatgccttc tttacccgtt cttccgccgc
     7501 caatatcccc gtgaatatgg ctttggcgaa aaaactgggg ctgcacgaag acacttattc
     7561 gatttccatc ccgttggggg cgaccgtcaa tatgggcggc gcggcgatta cgattaccgt
     7621 tttggctatg gcggcggcgc acacccaagg catacaggtt gattttgcca ccgcgctgct
     7681 gttgagcctg gtggcgacgg tcagcgcgtg cggcgcgtcc ggtgtggcag gcggttcgct
     7741 gctgctgatt ccgctggcgt gcagcctgtt cggcatcagc aacgatgtcg ctatgcaggt
     7801 ggtcgccgtc ggctttatca tcggcgtgat tcaggattcg gcggaaacgg cgttgaattc
     7861 ttcaaccgac gttttgttta ccgctgccgc cgatttgggc cgacagagaa accgggcgga
     7921 ataaaccaag ctatgccgtc tgaagcccgt tcggcgttca gacggcatat ttttacaatt
     7981 ttataggcat acggcggaaa caatgccggc tttgctttat tgaatacgaa ggagatgatg
     8041 atgtttaaac gcagcgtaat cgcaatggct tgtatttttg ccctttcagc ctgcggtggc
     8101 ggcggtggcg gatcgcccga tgtcaagtcg gcggacacgc tgtcaaaacc tgccgcccct
     8161 gttgtttctg aaaaagagac agaggcaaag gaagatgcac cacaggcagg ttctcaagga
     8221 cagggcgcgc catccacaca aggcagccaa gatatggcgg cagtttcggc agaaaataca
     8281 ggcaatggcg gtgcggcaac aacggacacg cccaaaaatg aagacgaggg ggcgcaagat
     8341 gatatgccgc aaaaagccgc cggtacagac agtttgacac cgaatcacac cccggctccg
     8401 aatatgcctg ccggagatat gggaaaccaa gcaccggata acggggaatc ggcgcagccg
     8461 gcaaaccaac cggatgcggc aaatgcgggg gatggaatac agggggacga tccgtcggca
     8521 ggggaaaatg ccggcaatac ggcttccgcc gaatccgcaa atcaaacagg gaacaaccaa
     8581 cccgccggtt cttcagattc cgcccctgcg tcaaaccctg cacctgcgaa tggcggtagc
     8641 aattttggaa gggttgattt ggctaatggc atcaagcttg acagcggttc ggaaaatgta
     8701 acgttgactc attgtaaaga cacagtatgc ggtagtgatt tcttagatga agaagcaccg
     8761 tcaaaatcag aatttgaatc gttaagtgat gaaaagaaaa ttgagaaata taaaaaagat
     8821 ggagaaaagt ttactaattt ggtcgcgaca gaagttcaag ctaatggggt gaataaatat
     8881 gtcatcattt ataaagacaa gtccgcttca tcttcatctg cgcgatttag gcgttctgca
     8941 cggtcgaggc ggtcgcttcc ggccgagatg ccgctgattc ccgtcaatca ggccgatacg
     9001 ctgattatcg atggggaagc ggtcagcctg acggggcatt ccggcaatat cttcgcgccc
     9061 gaagggaatt accggtatct gacttacggg gcggaaaaat tgtccggcgg atcgtatgcc
     9121 ctccgtgtgc aaggcgaacc ggcaaaaggc gaaatgcttg cgggcacggc cgtgtacaac
     9181 ggcgaagtgc tgcatttcca tatggaaaac ggccgtccgt ccccgtccgg aggcaggttt
     9241 gccgcaaaag tcgatttcgg cagcaaatct gtggacggca ttatcgacag cggcgatgat
     9301 ttgcatatgg gtacgcaaaa attcaaagcc gttatcgatg gaaacggctt taaggggact
     9361 tggacggaaa atggcggcgg ggatgtttcc ggaaagtttt acggcccggc cggcgaagaa
     9421 gtggcgggaa aatacagcta tcgcccgaca gatgcggaaa agggcggatt cggcgtgttt
     9481 gccggcaaaa aagagcagga ttgatgccga tgccgcctga agcgggggcg ttcagacggc
     9541 attgtgatgt ttggggtggg gtccggttca agtccgcatc agttgataaa cccgtcgtct
     9601 ttcattttct tttcggaaaa atactggccg aataccagca gggcagcgag gatgatgaca
     9661 aacagtcccg ccatagtcag agtgattttg aaaaacaatt ccgctttgag aaaagaaaac
     9721 cagagttgca caatcagcag cagcacccag ccggcaaaca gtccgagaca ggcataaacg
     9781 ccgagcttaa acacgatccc gctccaaaat gacgacgtag gcctcgcgtt tgaaaaacag
     9841 cagcatacgg cgcaaatctt tttccatcgt tacgacccgc cagccttcgg gggatttgtt
     9901 tgttgaggaa cgcgctgaaa ttgacggggt tgacctttgc cgcgccgaaa aacaggctgg
     9961 acaacaggct ttcctgataa atgacgactt tgtattcttt cataggattc cttttaacat
    10021 aagggatcat cttttcagac gaccccttaa gttgctaatg atgcaaaaca gcaaacctta
    10081 ttgcttattg cccaactgcg gcaataccga gccttcgccc aatgccaata aaccgctttg
    10141 cgagtagatg cccagtttgg cgcgggtgtc ggtgatgtcg aggttgcgca tagtcagttg
    10201 tccgatacgg tcgagcggtg tgaacgctgc gtcttcgact ttttccatac tcaggcgttc
    10261 gggttggtag gtcaggttgg gcgattcggt gttcagaatc gagtagtcgt tgccgcgacg
    10321 caattcgagg gttacttcgc cggtaatggc tttggcgacc cagcgttggg cggtttcgcg
    10381 caacatgagt gcttggctgt cgaaccagcg gccttggtag agcaggcggc cgaggcgcag
    10441 gccgttgatg cggtattgtt cgatggtgtc ctcgttgtgg atgccggtaa ccaagcgttc
    10501 gtaggcgatg tggaacaatg ccatgcccgg ggcttcgtag atgccgcgcg atttggcttc
    10561 gatgatgcgg ttttcgattt ggtcgctcat gcccaagccg tggcggccgc cgatgcggtt
    10621 ggcttcgagg aagagttcga cgggatcggc gtattctttg ccgttcagtg caaccggcac
    10681 gccttcttca aagcgcacgc tgacttcttc ggggctgact tcgacgtttt cgtcccaaaa
    10741 ggcaacgccc ataatgggtt tgacgatttt gatgcccgag ttcaaaaatt ccaagtcttt
    10801 ggcttcgtgg gtggcaccca acatattgga atcggtggag taggcttttt ccaccgacat
    10861 tttgtagttg aagccgttgg caatcagaaa ttcgctcatt tcgtgacggc cgccgagttc
    10921 gtcgataaat tgctgatcga gccagggttt gtagattttc agcgcgggat tggtgagcaa
    10981 accgtagcgg tagaaacgct cgatgtcgtt gcctttgtag gtgctgccgt cgccccaaat
    11041 attcacatcg tcttctttca tggcggaaac aagcatcgtg ccggttacgg cgcgacccag
    11101 aggcgtggtg ttgaaatagg cgatgccgcc ggtggaaacg tggaacgcgc cgcattggat
    11161 ggcggcgatg ccttcgtgtg ccaactgcgc gcggcagtcg atcaggcggg cgttttccgc
    11221 accgtattcc attgcttttt tgggaatggc attgtagtcg tcttcgtcgg gctggccgag
    11281 gttggcggtg taggcgtaag gcagtgcgcc tttgagtttc atccacaaca gcgcggcaga
    11341 ggtatcaaga ccgccggaga aagcgatgcc gactttttga ccgacgggga ggttttgtaa
    11401 aatagtatgg ttttggttca tgaaaaaatc ctcggtagct tgaaaaatca aagccattat
    11461 cttataaata ggaaatattg tcagccatca tgccgtctga acgggtattc cgccgtttca
    11521 ggcggtattt aaaaccgaaa acattatgaa cgcgttcaac ctcatcatca tcggcgacga
    11581 aatcttacac ggcagccgcc aagacaagca tttcgtcttt ttcaaatccc tgctcgaatc
    11641 caaagggctg aagctcaatc aggtgcaata tctgcccgac gaacccgatt tgctggtcag
    11701 gcaactgcgc cgcagctttt cagacggtat accgacgttt gttaccggcg gcatcggtgc
    11761 tacgcccgac gaccacacgc gccaagcggc cgccgccgct ttggagttgc ccgtcgtccg
    11821 ccatcctgaa gccgccaagt ttatcgaagg cgtaaccctg aaacgcggcg agccgctcga
    11881 ttcgcccgaa cacgcccaac gcctgaaaat ggcagatttc cccgaaggcg cggaattggt
    11941 gcccaatccg tttaacaaca tcgccggatt ttctatccgc gagcattatt ttttccccgg
    12001 cttccccgtg atggcgcacc cgatggcgga atgggttttg gatacttatt acgtcggccg
    12061 cttcaaccaa accaaacgcg gcagccgcag cgtgtatgtg tttgagcagc ccgaatcgcg
    12121 cattacgccg cttatggagc atatcgagca aacttatccc ggcgtgcgtt cgtacagcct
    12181 gcccagcgtc ggttggacgc attcagacgg cacgcaggtc aaaccgcaca ttgagttcgg
    12241 catcaaagcc gaaggagaag ccgtcaacct tttggacgcg gcgtgggcgg aagtgttgca
    12301 cagcttggac ggattgggag cagagctgaa aaatcgggta aactgaaaac cgtttgccca
    12361 aatcggacga tatttaagga aaaccatgca ataccgaatc agaagagaaa acgaagcacc
    12421 cgaagcaaaa aatgcggggg aaaccttatg ggagcgcgac atcatgcgcg aagtgctgct
    12481 gtccgcctat cgggacaggc gcagggagcg gatgtggaaa aacatctggc gcgccgtcag
    12541 caccctgatt ctggttgccc tgattgcagg cattttccaa aaagacgaag ccgcattgca
    12601 gttggcgggc aacacgccgc ataccgcagt cgtcaacctg tacggcgaaa tcggcaacgg
    12661 tgtagaagac caggtcaaaa aactcaaaga cggtatggag gccgcctaca aaaacccgca
    12721 ggcaaaagcc atcatcatcc gcgccaacag tccgggcggc tctcccgtcg tatccaatac
    12781 tgcctttgag gaaatacgcc gtctgaaagc gcaacatccc ggcatccccg tttatctcgt
    12841 ggcggaagat atgtgcgcgt ccggctgcta ctacatcgcg gcggcggcgg acaaaatcta
    12901 tgccgacccg tccagcatca tcggcagcat cggcgttatc ggcagcagtt tcgacgcgac
    12961 cggcctgatg gaaaaaatcg gcgtgaaacg cagggttaaa attgcaggca gcaacaaagg
    13021 catgggcgat ccgttttcgc ccgaaacgcc cgaacagtcg aaaatctggg aagaaatgct
    13081 gaccggcata cacggcgagt tcatcaaagc cgtcaaaacc ggacgcggcg accgcctcaa
    13141 attccgacaa tatcccgacg tgttcagcgg tcgcgtgtac acaggcgcgg atgcgctgaa
    13201 agtcgggctg gtggacggac tcggcaatat ttacagcgtg gcgcgagacg tggtcaaagc
    13261 ccccgatgtg gtggattaca ctccgaagga cgatttcggc agaatcttgg gcagacgctt
    13321 cggcgcagaa ctcaaagcaa gcgtgcgcga agccctgcag gccgtccggt agcgttgttt
    13381 acagtatttc taagggaata ccaaaataaa aatatacaca aaaacactca cctccccagt
    13441 atgctgccac taagtcagcc gcgtcactat ttaccgtgca cttaaagccg taaaaggcag
    13501 gttgtccccg ggaggttttg tgcatcctga taccgatcgg ttgttgttgc tcaaaggaca
    13561 gaaggccgct gataaacgag attacctgtt tgtcgctatt gacgattttt atactctgcc
    13621 attttgccgg acaaaaccgc agacagtgct gccaagtttc tgaccgaaca tctgtccgac
    13681 ccctgcttgt acctgattga gtacgtttac tctgacaatg ataggtaata taaagagccg
    13741 tccaacatgc tttcggtgca gcttgttatg ataatgggat tggttggagg cttgcccgat
    13801 ttgcttgtcc gcagaccaac ggtaaggcgg agcgggttat ccgtaccttg atggagatgt
    13861 ggcatgagga acagtcgttt gacagtccgg aacatcggca aaaggagttg tgctgcttta
    13921 ttaatttagg ggctgcccta gatcactagg gaaattcaaa ttaagttaga attatcccta
    13981 tgagaaaaag tcgtctaagc cggtataaac aaaataaact cattttgtta tcgtggctat
    14041 gatgtattgg atgcgggcga atttagccat ttccgtatca atcacagcac acattttgcc
    14101 gaacgacaaa accatattaa tggaactgag aacttttgga atca
//
LOCUS       DAWITQ010000035        13837 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.035, whole genome shotgun sequence.
ACCESSION   DAWITQ010000035 DAWITQ010000000
VERSION     DAWITQ010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13837)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13837)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13837
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.035"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..1707
                     /locus_tag="WIX18_000855"
     CDS             <1..1707
                     /locus_tag="WIX18_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEZ5237992.1"
                     /translation="LYTKLTRKRQEIFFNQTLAFDEIDRLFDAKAFSKFSRYTADGKQ
                     AVGEIKRHSDGTPAENLIIKGNNLIALHSLAKQFKGKVKLIYIDPPYYFVKKKQQDSF
                     GYNTNFKLSTWLTFMKNRLSIAKELLTDDGIIVISIDDDGNAYLKILLDEIFGFENFI
                     GNLPTIMNLKGNNDEYAFAGTHEYTLVFAKNKDKSTFYEFPIDEDNFLEKWEEDEIGF
                     YKKGAPMRATGTEDKREDRPEMFYPFLVKNNTVSTITDEEFSQIYNKDLEVFNDDFIQ
                     KLKEKYENLGYNFILPIADKQWGRWRWGYSIKNKARLQTDIIVSQSKNGISLYKKQRP
                     ELDDLPTKKPKTIFYKPEYSSGNGTEQMKNLFGEKAFKNPKPEELIQDFITITTNESD
                     IVLDYHLGSGTTAAVAHKMNRQYIGIEQMDYIETLAVERLKKVIDGEQGGISKAVNWQ
                     GGGEFVYAELAPFNETAKQQILACEDSDGIKTLFEGLCERYFLKYNVSVNEFSQIIQE
                     PEFQSLPLDEQKQMVLEMLDLNQMYVSLSEMDDEQFADCLNDDDKAVSRAFYQAEKKN
                     GE"
     gene            1697..4483
                     /locus_tag="WIX18_000856"
     CDS             1697..4483
                     /locus_tag="WIX18_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HEZ5237993.1"
                     /translation="MANNKTLFEVIENRKAVYLEDGDDEKYRLPKFVSNNLKYPFFEW
                     QKSALENFVIFDRTSKLKDFPDIKNRPTHLLFNMATGAGKTMMMAALILYYFEKGYRH
                     FLFFVNQNNIVDKTENNFIDPTHAKFLFTEKILQGDTVIPIRKVETFSPHSDGIEIKF
                     TSIQKLYNDIHTERENQTTLADLHELNLVMLGDEAHHLNAQTKGKKQGELDLEVELKA
                     NAGNAEIERKGWEHMVLELLLNKNGNPSQNVLLEFTATLPENADVQQKYADKIITKFG
                     LKEFLQKGYTKEINLVSSTLGKKERVLHALLFAWYRHQIALKYGIANFKPVMLFRSKT
                     IDESKADYLAFLNWAENVQAVDFSFLTTFSTSLNDSDSDNANEQGKTRTEQALKFMQE
                     KGVEFAHLADWVKQNYQKHNVIITNSETNKTKTEKTDSETEKLLNNLEAADNPIRAIF
                     TVDRLTEGWDVLNLFDIVRLYEGQNGGGSNKKSGKTAAATVSEKQLIGRGVRYFPFAF
                     EGKQPNKRKFDNDMQHELRILEELFYYAHDEQSRYISELKNELRKDGYLPEKDDDKVL
                     ATFKLKSEFAANKDFRELLIWANKKIPNPNAKSNNADSLKANPQTLSFQVHGNQLLQE
                     TQFTADENDETARQIGTQNNFTQTIKMSEMERHIFNKALHIKGKNSQSLFHFNRLQSK
                     LDIQNRNELQNNLLKDWQIEFLGLGQDKQVRLDDKLAGCLKILEMVEKHLNESDMPFI
                     GTKEFTPKKLWEIFGTPKQKWVKKDDVKTTIATQNDWYVMNNFAGTGLEEALIQFISA
                     RLGDLKSKYDVHLIRNEEVFKLNNFADGEGFMPDFILLLKDKQKSSSNGVNDFLHYQI
                     FIEPKGEHLVETDGWKEEFLEAITVEYGMDKILQKDTPHYRLIGLPFFTDHQKNGQFT
                     ESFPLGAASLEKMK"
     gene            complement(4627..5799)
                     /locus_tag="WIX18_000857"
     CDS             complement(4627..5799)
                     /locus_tag="WIX18_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy-acid oxidizing protein"
                     /protein_id="HEZ5237994.1"
                     /translation="MKRDLSKMTCIEDLRRVAKRKMPRMFYDYIDSGSWTETTYRENT
                     SDFKDIRFRQKVLVNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGEILAARAAE
                     KFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKDAKCSALVLT
                     ADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKPEWCMKMLNTERRTFRNIVGHAKN
                     VGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGIMEPEDAEKAAKSGADALI
                     VSNHGGRQLDDTVSAIKALPDIVSAVGSDIEVWMDSGIRSGQDILKAWALGAKGTMIG
                     RAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGHRDIQDVDASILRGKDWGRETV"
     gene            6149..6595
                     /gene="iscR"
                     /locus_tag="WIX18_000858"
     CDS             6149..6595
                     /gene="iscR"
                     /locus_tag="WIX18_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HEZ5237995.1"
                     /translation="MRLTTKGRFAVTAMLDLAMNAQTGAVKLSAISERQNISLSYLEQ
                     LFGKLRRAGLVESLRGPGGGYILAAPAARINIAQIIAAAEDRLDATQCGSKANCHHGA
                     PCLTHDLWENLNKTINDYLGSVTLQSIIEQKNNSDGSRVVQFTHIH"
     gene            6624..7838
                     /locus_tag="WIX18_000859"
     CDS             6624..7838
                     /locus_tag="WIX18_000859"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IscS subfamily cysteine desulfurase"
                     /protein_id="HEZ5237996.1"
                     /translation="MTVKTPVYLDYAATTTVDKRVAEKMIPYLTETFGNPASNSHAFG
                     WEAEEAVEKARADIAALINADPKEIVFTSGATESDNLAIKGAANFYKTKGKHLITVKT
                     EHKAVLDTMRELERQGFEVTYLGVQENGLIDLEELKAAIRDDTILVSVMWANNEIGVV
                     QDIPAIGEICRERKIVFHVDAAQACGKVPVDVEAAKIDLLSMSAHKVYGPKGIGALYV
                     RRKPRVRLEAQMHGGGHERGFRSGTLPTHQIVGMGEAFRIAKEELAQDTAHYLKLRDI
                     FLKGIEGIEEVYINGDLGHRAPNNLNVSFNFVEGESLIMAVKELAVSSGSACTSASLE
                     PSYVLRALGRNDELAHSSLRITFGRMTTEEEVQFAAELIKSKIGKLRELSPLWEMFKD
                     GIDLNSIEWAAH"
     gene            7984..8829
                     /locus_tag="WIX18_000860"
     CDS             7984..8829
                     /locus_tag="WIX18_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEZ5237997.1"
                     /translation="MKIANALIHNTVRIECLSADGQSISTGTAFLFLFDFDKTGVIPV
                     LVTNKHVVFVESAKKIAITLTKDENGSPNHKENITFTIEDFIQNCLPHPDENIDLCIA
                     PVGHFFNQLINHNFSPFIKGIRESDIMQTEEMDQLSAFEEVFMIGYPNGLWDSKNNLP
                     IFRTGITATHPAIDFEGKKEFMIDVACFPGSSGSPVFKYIPAGLRKIENDGFAITADE
                     TFKLMGILYAGPQQTISGEIYITTVNKPISVSSIPINLGFVIKAEKLLDFKPILKNFL
                     EKNRE"
     gene            9172..9558
                     /gene="iscU"
                     /locus_tag="WIX18_000861"
     CDS             9172..9558
                     /gene="iscU"
                     /locus_tag="WIX18_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HEZ5237998.1"
                     /translation="MAYSDKVIDHYENPRNVGTFDKNDESVGTGMVGAPACGDVMRLQ
                     IKVNDEGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLDDALAIKNSEIAEELELPPV
                     KIHCSILAEDAVKAAVADYRKRQENR"
     gene            9645..9965
                     /gene="iscA"
                     /locus_tag="WIX18_000862"
     CDS             9645..9965
                     /gene="iscA"
                     /locus_tag="WIX18_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HEZ5237999.1"
                     /translation="MITLTENAAKHINDYLAKRGKGLGVRLGVKTSGCSGMAYNLEFV
                     DEADGDDLIFEGHGARIYIDPKSLVYLDGTQVDYTKEGLQEGFKFENPNVKDSCGCGE
                     SFHV"
     gene            complement(9925..10146)
                     /locus_tag="WIX18_000863"
     CDS             complement(9925..10146)
                     /locus_tag="WIX18_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome-rescue factor A"
                     /protein_id="HEZ5238000.1"
                     /translation="MGGKVQHNKGKIRDNALKALVKSDLFRHKVERKRKGKGSYNRQE
                     AKKWRDGFDTVPPFLCLKRGSFRRSRRSL"
     gene            10228..10728
                     /gene="hscB"
                     /locus_tag="WIX18_000864"
     CDS             10228..10728
                     /gene="hscB"
                     /locus_tag="WIX18_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly co-chaperone HscB"
                     /protein_id="HEZ5238001.1"
                     /translation="MSQYFTLFRIEPAFDIDTENLEQTYRALAARFHPDKFASASAFE
                     QKQAVMMSSTINDAYRTLKNPIDRAAYLLKTSGIDADAPEHTAFAPEFLMQQMEWRET
                     LMEARAGNDLESLKNLDNEIRDEQEKLFCGLKQSFARQDYDTAAQQVRQGRFLDKLRN
                     EISSAL"
     gene            10826..13576
                     /gene="gyrA"
                     /locus_tag="WIX18_000865"
     CDS             10826..13576
                     /gene="gyrA"
                     /locus_tag="WIX18_000865"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEZ5238002.1"
                     /translation="MTDATIRHDHKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPD
                     VRDGLKPVHRRVLYAMHELKNNWNAAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQ
                     NFAMRYVLIDGQGNFGSVDGLAAAAMRYTEIRMAKISHEMLADIEEETVNFGPNYDGS
                     EHEPLVLPTRFPTLLVNGSSGIAVGMATNIPPHNLSDTVNACLRLLDAPDTEIDELID
                     IIQAPDFPTGATIYGLSGVREGYKTGRGRVVMRGKTHIEPIGRNGEREAIVIDEIPYQ
                     VNKAKLVEKIGDLVREKTLEGISELRDESDKSGMRVVIELKRNENAEVVLNQLYKLTP
                     LQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRREVVTRRTLFRLKKARHEGHIAEGK
                     AVALSNIDEIIRLIKESPNAVEAKDKLLAHPWRSSLVEEMLTRSGLDLEMMRPEGLAA
                     NIGLKEQGYYLSEIQADAILRMSLRNLTGLDQEEIVESYKNLMGKIIDFVDILSKPER
                     ITQIIRDELEEIKTNYGDERRSEINPFGGDIADEDLIPQREMVVTLTHGGYIKTQPTT
                     DYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFTNLGKCHWIKVYKLPEGGRN
                     SRGRPINNVIQLEEGEKVSAILAVREFPEDQYVFFATAQGMVKKVQLSAFKNVRAQGI
                     KAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNEYWEKSGNDEAEDADIETEISD
                     GIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADGKIVSLITFAPETEESGLQV
                     LTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAATLVGETDDLMLITSGG
                     VLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAEDESELSDASVISNVTEPEV
                     EN"
     gene            13733..13837
                     /locus_tag="WIX18_000866"
                     /pseudo
     CDS             13733..13837
                     /locus_tag="WIX18_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249760.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT         4264 a         3343 c         2979 g         3251 t
ORIGIN      
        1 ttatacacta aattaacccg aaaaagacaa gaaatctttt ttaatcaaac gcttgctttt
       61 gatgaaatcg atcggctttt tgacgcaaaa gcattctcaa aattctctcg ctataccgca
      121 gacggcaaac aagcggttgg cgaaatcaaa cgtcattcag acggcacacc cgccgaaaat
      181 ctcattatca aaggcaataa tctgatagcc ctacattcgc ttgccaaaca gtttaaaggc
      241 aaagtgaagt tgatttatat tgatccgcct tattattttg ttaaaaagaa acaacaagat
      301 agttttggtt ataacactaa ctttaaatta tctacttggc ttacatttat gaaaaatcgt
      361 ttatcaattg ccaaagaatt attaactgat gatgggatta ttgttatttc cattgatgat
      421 gacggaaatg cttatttaaa gattttgtta gatgaaattt ttggatttga aaattttatc
      481 ggaaatttac ccactattat gaatttaaaa ggtaataatg atgaatatgc ttttgcaggc
      541 actcacgaat acacactagt ctttgctaaa aataaagata aatctacttt ttatgaattt
      601 ccaatagatg aagataattt tttagagaaa tgggaagaag atgaaattgg gttttataaa
      661 aaaggagctc caatgcgagc aacaggaacc gaagataaaa gagaagatag acctgaaatg
      721 ttctatcctt ttttggtaaa aaataacaca gttagtacaa ttacagatga agaattttct
      781 caaatctata ataaagattt agaagtattc aatgatgatt ttattcaaaa actaaaagag
      841 aaatacgaaa atcttggata caattttatt ttacctattg ctgataaaca atgggggcgt
      901 tggcgttggg ggtattcaat aaagaataag gcaaggctgc agacggatat tattgttagc
      961 caatctaaaa atggaatttc cttgtataaa aaacaaagac ctgaattaga tgatttacct
     1021 acaaaaaaac ctaaaactat tttttataaa cctgaataca gtagtggtaa tggaactgaa
     1081 cagatgaaaa atctttttgg tgaaaaggca tttaaaaatc ctaaaccaga agaacttatc
     1141 caagatttta ttaccatcac aaccaacgaa tccgacatcg tcttagacta ccatcttggt
     1201 agtggcacaa ccgccgccgt tgcccacaaa atgaaccgac aatatatcgg tattgaacaa
     1261 atggattata ttgaaacgct tgccgttgaa cgcttgaaaa aagtgattga tggcgagcaa
     1321 ggcggtattt ccaaagccgt gaattggcaa ggtggtggcg agtttgttta tgccgaactt
     1381 gccccattta acgaaaccgc aaaacaacaa attttggctt gcgaagattc agacggcatc
     1441 aaaacgctgt ttgaaggttt atgcgaacgc tatttcttga aatacaacgt cagcgtaaat
     1501 gaatttagtc aaatcattca agagcctgaa tttcaatctt tgccattaga cgaacaaaaa
     1561 caaatggtgc ttgaaatgtt agatttaaat caaatgtatg tttcattatc cgaaatggac
     1621 gacgagcaat ttgcagattg cctgaacgat gacgataaag cggtaagccg tgcgttctat
     1681 caagcggaga aaaaaaatgg cgaataataa aactttgttt gaagtaattg aaaaccgcaa
     1741 agctgtgtat ttggaagacg gagatgatga aaaatacagg ctgcctaaat ttgtttcaaa
     1801 taatttgaaa tatccgtttt ttgaatggca aaaatcggct ttagaaaact ttgtgatttt
     1861 tgaccgcact tcaaaattaa aggattttcc cgatatcaaa aaccgcccta ctcatttgct
     1921 atttaatatg gcaacaggtg caggcaaaac gatgatgatg gcggcattga ttttgtatta
     1981 ttttgaaaaa gggtatcggc attttctgtt ttttgtgaat caaaacaata tcgtggataa
     2041 aacggaaaat aattttattg acccgacaca cgcaaaattt ttatttaccg agaagatttt
     2101 gcagggcgat acggtaattc ccattcgcaa agtggaaacg ttcagcccac attcagacgg
     2161 cattgaaatt aaatttacca gcattcaaaa gctgtataac gatattcaca ccgaacggga
     2221 aaaccaaacc acattggcgg atttgcacga attgaatctt gtgatgctgg gcgatgaagc
     2281 acaccattta aacgcgcaaa ccaaaggcaa aaaacaaggc gagttggatt tggaagtgga
     2341 attaaaagcc aatgcaggca atgccgaaat tgaacgcaaa ggctgggagc atatggtttt
     2401 ggaattgtta ctcaataaaa atggcaatcc cagccaaaat gtgctgttgg aatttaccgc
     2461 cacgctgcct gaaaatgctg acgtgcaaca aaaatacgcg gataaaatca tcacaaaatt
     2521 tggcttaaaa gaatttttgc aaaaaggtta taccaaagaa atcaatttgg tatccagtac
     2581 gctgggcaag aaagagcggg tgttgcacgc tttattattt gcttggtatc gccatcaaat
     2641 cgctttgaaa tatggcattg ccaatttcaa gcctgtgatg ttgtttagaa gtaagacgat
     2701 tgatgaatca aaagcggatt atctggcatt tttaaattgg gcagaaaatg tgcaggcggt
     2761 tgatttttcg tttttaacta cattttcaac aagcttgaac gatagcgata gcgataacgc
     2821 caacgaacaa ggcaaaaccc gcactgaaca agccctaaaa tttatgcagg aaaaaggcgt
     2881 tgagtttgca catttggcag attgggtaaa acaaaattat caaaaacaca atgtgattat
     2941 taccaactcc gaaaccaaca aaaccaaaac cgaaaaaacc gacagcgaaa cagaaaaatt
     3001 gctgaataat ttggaagcgg ctgataatcc gattcgtgcc atttttacgg tggacagatt
     3061 aaccgaaggt tgggacgttc tgaatttgtt tgatattgtg cgtttgtatg aagggcaaaa
     3121 cggcggcggt tcaaataaaa aatcaggcaa aacggctgcc gccaccgtat cggaaaagca
     3181 gttgattggt cgtggcgtgc gttattttcc atttgcgttt gaaggtaaac agccgaataa
     3241 acgcaaattt gacaacgata tgcaacacga attgcgtatc ttggaagaat tgttttatta
     3301 cgcgcacgat gagcaatccc gctatatttc agaactgaaa aatgagttgc gaaaagacgg
     3361 ttatttgcct gaaaaagacg atgataaggt attggcaaca tttaaactca aatctgaatt
     3421 tgccgctaat aaggatttta gagaattgtt aatttgggcg aataaaaaaa tccccaaccc
     3481 aaacgccaaa agcaataatg cagacagcct aaaagccaat ccacaaacgc tttcattcca
     3541 agttcacggt aatcaactgt tgcaggaaac gcaatttaca gccgatgaaa atgatgaaac
     3601 agcccgacaa atcggcacac aaaataattt tactcaaacc ataaaaatga gtgaaatgga
     3661 gcggcacatt ttcaataaag cattacatat caaagggaaa aatagtcaat ctttattcca
     3721 tttcaaccgt ttgcaaagca agctcgacat tcaaaatcgc aatgaattgc aaaataactt
     3781 gttgaaagac tggcaaattg aatttttagg attagggcaa gacaaacagg ttcgcctgga
     3841 cgataaactt gcaggctgcc tgaaaatctt ggaaatggtt gaaaaacatc tgaatgaaag
     3901 tgatatgccg tttatcggta caaaagaatt tacacctaaa aaattatggg aaattttcgg
     3961 cacgccaaaa caaaaatggg tcaaaaaaga tgatgtaaaa acgactattg ccacgcaaaa
     4021 tgattggtat gtgatgaata attttgccgg aacgggtttg gaagaagcgt taattcaatt
     4081 tatttcagcg cgtttgggcg atttgaaatc taaatatgac gttcatttaa tccgtaatga
     4141 agaagtgttt aaattgaata actttgccga tggtgaagga tttatgccgg actttatttt
     4201 attgctgaaa gataaacaaa aatcttcttc caatggtgtg aacgactttt tgcattacca
     4261 aattttcatt gagcccaaag gtgagcattt agtggaaact gatggatgga aagaagaatt
     4321 tttagaagcc atcactgtgg aatatgggat ggataagatc ctgcaaaaag atacaccgca
     4381 ttatcgtttg atcggtttac cgttttttac tgatcatcag aaaaatggac aatttacgga
     4441 gtcattccct ttaggtgcgg catcgcttga aaaaatgaag tagtgcattg caggcaaccc
     4501 cgtttgacaa aacttccttt acaaaagggc gttttgtcag atatttaatc aacacattat
     4561 taaaatacag ccaaatttta atgccgtccg aaccctgtgt tcagacggca tcgtattttt
     4621 cagtatctaa accgtttccc tgccccaatc tttgcctctc aaaatcgaag catcgacatc
     4681 ttgaatatcg cggtgtcccg taaacgccat agatatatcc atttctttat acaggatttc
     4741 cagcgcacgg gttacgcctt cttcaccata cgcacccaaa ccatacagaa acgcccggcc
     4801 tatcatcgta cctttcgcgc ccaaagccca cgccttcaaa atatcctgac cgctgcggat
     4861 accgctgtcc atccaaactt cgatgtcgct gcccactgcg ctgacgatgt cgggcaaggc
     4921 tttgatggca gacacggtat cgtcgagctg tcggccgccg tggttggaaa caatcaatgc
     4981 gtccgcgccg cttttcgctg ctttttccgc gtcttcgggt tccataatgc ctttgataat
     5041 cagcttgccg ccccacaaat ctttaatacg cgccacatcg tcccagctca ggcgcgggtc
     5101 gaattgttcg gaagtccatg aagacagcga agacaaatcg ccgacgttct tcgcgtgtcc
     5161 gacgatattg cggaacgtgc ggcgttccgt gttcagcatt ttcatgcacc attccggttt
     5221 ggtcgccaga ttgattaaat tggcgatggt cggtttcggc ggcgcggaca ggccgttttt
     5281 gatgtctttg tggcgttgcc ccaaaacctg caaatcggcg gtcaaaacca atgccgaaca
     5341 tttggcatcc ttcgcgcgct taatcaggtt ttccataaat tcgcggtcgc gcatcacata
     5401 aagctgaaac caaaacggcg cgctggtgtt ctcggcaacg tcttcaatcg agcagatgga
     5461 catggtggac aacgtaaacg gaataccgaa cttctccgcc gcccgcgccg ccaaaatttc
     5521 gccgtctgcg tgtgccatgc cggtaaaacc cgtcggcgca atcgccaccg gcattttcac
     5581 atcctgcccg atcattttag tctcaaggct gcgtccctcc atattgacca atactttttg
     5641 acggaagcgg atgtctttga aatccgaagt attttcccga taagtcgttt ccgtccacga
     5701 acccgaatcg atgtaatcgt aaaacatacg cggcattttg cgcttggcaa cgcggcgcaa
     5761 gtcttcgatg caggtcattt tgctcaaatc acgtttcatc ttgtttttcc ctgtttgaca
     5821 gcctgatgga atatgccgtc cgaaaccgct tgagccttca aacggcattt caggcaatac
     5881 ccaaataaat cactaagatt tagataatct atatcagtat caaaaataaa tcaaatcgtt
     5941 ttgaaaccgc ttgccggcaa aataccccga ccgccgctcc tcaaaaaaca taaccaactg
     6001 atttaaaaaa ccaaacaaat aaagtaaaat cagactatac cgccatttaa acaaacaatc
     6061 ggcaacagct cccccttact tgactgaaac actcagatat tggacaattc tccccactat
     6121 aaaaaagccg acacgggcaa ccaccaccat gagactgacc accaaagggc gttttgccgt
     6181 taccgctatg ctggatttgg cgatgaacgc gcaaaccggc gccgtcaaac tcagtgccat
     6241 cagcgaacgc caaaacatat ccctctccta tctcgagcaa ttgttcggca aactccgccg
     6301 cgccggactg gttgaaagcc tgcgcgggcc cggcggcggc tacatcctcg ccgcaccggc
     6361 ggcacgcatc aacatcgccc aaatcatcgc cgccgccgaa gaccggctgg acgcgaccca
     6421 atgcggcagc aaagccaact gccaccacgg tgcgccctgc ctgacgcacg acctttggga
     6481 gaatttaaac aaaaccatca acgactacct cggcagcgtt accctgcaaa gcatcatcga
     6541 acagaaaaac aacagcgacg gcagccgcgt cgtccaattt acacacatcc attaaataac
     6601 acccgaaaaa gaaagagcaa accatgaccg tcaaaacccc cgtttacctc gactacgccg
     6661 ccaccaccac cgttgacaaa cgcgttgccg aaaaaatgat tccctatctg accgaaacct
     6721 tcggcaaccc cgcctccaac agccacgcat tcggctggga agcagaagag gccgtcgaaa
     6781 aagcccgcgc cgacatcgct gccctgatta atgccgaccc caaagaaatc gtcttcacca
     6841 gcggcgcgac cgagtccgac aacctcgcca tcaaaggcgc ggcaaacttc tacaaaacca
     6901 aaggcaaaca cctcattacc gtcaaaaccg aacataaagc cgttttagat acaatgcgcg
     6961 aactcgaacg ccaaggtttt gaagtaacct acctcggcgt tcaagaaaac ggtttgattg
     7021 atttggaaga actcaaagcc gccatccgcg acgacaccat cctcgtttcc gtaatgtggg
     7081 caaacaacga aatcggcgtg gtgcaagaca ttcccgccat cggcgaaatc tgccgcgaac
     7141 gcaaaatcgt cttccacgtc gatgccgccc aagcctgcgg caaagtgcct gtcgatgtcg
     7201 aagccgccaa aatcgacctg ctctcgatgt ccgcgcacaa agtgtacggc cccaaaggca
     7261 tcggcgcgct gtacgtccgc cgcaaacccc gcgtccgcct cgaagcccaa atgcacggcg
     7321 gcggccacga acgcggcttc cgcagcggca cattgccgac ccaccaaatc gtcggtatgg
     7381 gcgaagcctt ccgcattgcc aaagaagaat tggcacaaga cactgcgcac tacctgaaac
     7441 tgcgcgatat cttcctcaaa ggcatcgaag gcatcgaaga agtctacatc aacggcgacc
     7501 tcggacaccg cgccccgaac aacctgaacg tcagcttcaa cttcgtcgaa ggcgaaagcc
     7561 tgattatggc ggtgaaagaa ctcgccgtat ccagcggctc cgcctgcacc tccgcctcgc
     7621 tcgaacccag ctacgtcctg cgcgcgctcg gccgcaacga cgaactggcg cactcatccc
     7681 tgcgtatcac cttcggtcgc atgaccaccg aagaagaagt gcaattcgcc gccgaactga
     7741 ttaaatccaa aatcggcaaa ctgcgcgaac tgtcgccgct gtgggaaatg ttcaaagacg
     7801 ggattgattt gaactcgatt gaatgggcgg cgcattaatt tatgaattag tacgatgata
     7861 tgagtatagt agataagatt ttcaaatatt ctcgccacct cgattattga gatatagtga
     7921 acttcttatc tacggataaa atttttatag atagtttaat atttaaatag aacttaaaaa
     7981 attatgaaaa tagccaatgc attaattcac aatacagtcc gtattgaatg cctttcagca
     8041 gacggccaat ctatatcaac gggaacggca ttcttattcc ttttcgattt cgacaaaaca
     8101 ggggtaattc cagttcttgt aacaaataaa catgttgttt ttgtagagtc cgcaaaaaaa
     8161 atagctatta ctttgacaaa agatgaaaat ggctctccaa atcataaaga aaatataact
     8221 tttacaattg aagattttat acaaaattgt ttacctcatc ctgatgaaaa tattgatcta
     8281 tgcattgctc ctgttggaca tttttttaat cagctgatta atcataattt ctcgcctttt
     8341 ataaaaggaa taagagaatc tgatattatg caaactgaag aaatggatca attatcagct
     8401 ttcgaagaag tttttatgat aggctatcct aatggcttat gggactcaaa aaacaactta
     8461 ccaatattta gaacaggaat tactgctacc catccagcta ttgattttga agggaaaaaa
     8521 gaatttatga ttgatgttgc ctgtttccct ggttcaagcg gttctccggt gttcaaatat
     8581 atacctgctg ggttaagaaa aatagaaaac gatgggtttg caattacagc agatgaaaca
     8641 tttaaattaa tgggaatcct atatgctgga cctcagcaaa caatatcagg ggaaatttat
     8701 ataacaactg ttaataaacc aatttctgta tcttctattc ctattaattt aggttttgtc
     8761 ataaaggcag aaaaactttt agactttaaa ccaattttaa agaatttttt ggaaaaaaat
     8821 agagaatgaa attatattaa aagattaata aatattagag actggcaatc caccttacct
     8881 aatctacatt aaaaataaaa aagaccgttt gaaacatcaa aaagattttt tcaaacgacc
     8941 taaaagccac cacatgaaat caaggataca aaaccatgaa cgaacaagaa cttgacctcg
     9001 acaatctcga caacctgctt gacgattttg acggcgttac cgtcgaaggc ggcgtcgatt
     9061 cggaaaacga cgaaggctgc gaaggcggcg cgtgcaaaat ctgactcagg ccgtctgaaa
     9121 accggcaaac aaaccacttt aaactatcaa aaacattaag gaaaccacat catggcatac
     9181 agcgataaag taatcgacca ctacgaaaat ccccgcaacg tcggtacttt cgacaaaaac
     9241 gacgaatctg tcggcaccgg catggtcggc gcgcccgcct gcggcgacgt catgcgcctg
     9301 caaatcaaag tgaacgacga gggcatcatc gaagatgcga aatttaaaac ttacggctgc
     9361 ggctcggcca tcgcttcgtc cagcctgatt accgagtggg ttaaaggcaa aagcctggat
     9421 gacgcgctgg caatcaaaaa cagcgaaatc gccgaggagt tggaattgcc gccggtaaaa
     9481 atccactgct ccatcttggc tgaagatgcg gtaaaagcgg ccgttgccga ctaccgcaaa
     9541 cgtcaggaaa acagataaag cccttcagac ggcatcatcc cgcaatgccg tccgaaccac
     9601 ccgccgcttc aggtccgtcc ggggcggtac aacaaggaag aaatatgatt acccttaccg
     9661 agaatgccgc aaaacacatc aatgactatc tcgccaaacg cggcaaaggc ttgggcgtac
     9721 gcttgggtgt gaaaaccagc ggctgctcgg ggatggcgta caaccttgaa tttgtcgacg
     9781 aagccgatgg cgacgacctg attttcgaag gacacggcgc gcgcatttat atcgatccga
     9841 aaagcctggt ttatctggat ggcacgcaag tcgattacac caaagaaggt ttgcaggaag
     9901 gtttcaaatt tgaaaacccc aatgtcaaag actcctgcgg ctgcggcgaa agcttccacg
     9961 tttaaggcat aaaaacggcg ggaccgtatc aaaaccgtcc cgccattttt tcgcttcctg
    10021 cctgttgtag ctgcctttgc ctttcctttt ccgttccacc ttgtgccgga acaaatcgga
    10081 tttcactaag gcttttaaag cattgtcgcg tattttgcct ttattgtgct gcactttgcc
    10141 gcccatattc agtcctttcg tttaagaagc ggcagattat aaggcaaaaa cagttttctg
    10201 ccaaaatctt acatttatca tcctactatg tcccaatatt tcaccctctt ccggattgaa
    10261 cccgctttcg atatcgacac cgaaaacttg gaacaaacct accgcgcctt ggccgcccgt
    10321 ttccatcccg ataaattcgc ttcagcttcc gcctttgagc aaaagcaggc agtgatgatg
    10381 tcttccacca tcaacgatgc ctaccgcacc ttgaaaaacc ccatcgaccg cgccgcctac
    10441 ctgctgaaaa catcgggcat cgatgccgac gcgccggagc ataccgcttt cgcccccgaa
    10501 ttccttatgc agcaaatgga atggcgcgaa acgctgatgg aggcacgggc aggcaacgac
    10561 cttgaatcct tgaaaaatct cgacaacgaa atccgcgacg agcaagaaaa actgttctgc
    10621 ggtctgaaac agtcgtttgc ccgacaagat tacgacacag ccgcacaaca agtccgccaa
    10681 ggcaggtttc tcgacaaact ccgcaacgaa atttcctcgg cattataatc cgcaccgtgt
    10741 ttcagacggc gtaaccgccg caccgttccg cgtcaaaata tgctaaaata agcaacaatt
    10801 ttttgccata cgaaacattg aaaccatgac cgacgcaacc atccgccacg accacaaatt
    10861 cgccctcgaa accctgccgg taagccttga agacgaaatg cgcaaaagct atctcgacta
    10921 cgccatgagc gtcattgtcg ggcgcgcgct gccggacgtt cgcgacggtc tcaagccggt
    10981 acaccgccgc gtactgtacg cgatgcacga attgaaaaac aactggaatg ccgcctacaa
    11041 aaaatcggcg cgcattgtcg gcgacgtcat cggtaaatac cacccccacg gcgataccgc
    11101 cgtatacgac accatcgtcc gtatggcgca aaatttcgct atgcgttatg tgctgataga
    11161 cggacagggc aacttcggat cggtggacgg gcttgccgcc gcagccatgc gctacaccga
    11221 aatccgcatg gcgaaaattt cccacgaaat gctggcagac attgaggaag aaaccgtcaa
    11281 tttcggcccg aactacgacg gtagcgaaca cgagccgctt gtactgccga cccgtttccc
    11341 cacactgctc gtcaacggct cgtccggcat cgccgtcggc atggcgacca atatcccgcc
    11401 gcacaacctt tccgataccg tcaatgcctg cctgcgcctg ctcgatgcac ccgacaccga
    11461 aatcgacgaa ctgatcgaca ttatccaagc ccccgacttc ccgaccgggg caaccatcta
    11521 cggcttgagc ggcgtgcgcg aaggctataa aacaggccgc ggccgcgtcg ttatgcgcgg
    11581 taagacccat atcgaaccca taggcagaaa cggcgaacgc gaagccatcg ttatcgacga
    11641 aatcccctat caggtcaaca aagccaagct ggtcgagaaa atcggcgatt tggttcggga
    11701 aaaaacactg gaaggcattt ccgagctccg cgacgaatcc gacaaatccg gtatgcgcgt
    11761 cgttatcgag ctgaaacgca acgaaaatgc cgaagtcgtc ttaaaccaac tctacaaact
    11821 gactccgctg caagacagtt tcggcatcaa tatggtggtt ttggtcgacg gacaaccgcg
    11881 cctgttgaac ctgaaacaga ttctctccga attcctgcgc caccgccgcg aagtcgttac
    11941 ccgacgtacg cttttccggc tgaagaaggc acgccatgaa gggcatatcg ccgaaggcaa
    12001 agcggtcgca ctgtccaata tcgatgaaat catccggctt atcaaagaat cgcccaacgc
    12061 ggtcgaggcc aaagacaaac tgcttgcgca cccttggcgc agtagcctcg ttgaagaaat
    12121 gctgacgcgt tccggtctgg atttggaaat gatgcgtccg gaaggattgg ctgcaaacat
    12181 cggcttgaaa gagcaaggtt attacctgag cgagattcag gcagatgcta ttttacgcat
    12241 gagcctgcga aacctgaccg gcctcgatca agaagaaatt gtcgaaagct acaaaaacct
    12301 gatgggtaaa atcatcgact ttgtggatat cctctccaaa cccgaacgca ttacccaaat
    12361 catccgcgac gaactggaag aaatcaaaac caactatggc gacgaacgcc gcagcgaaat
    12421 caacccgttc ggtggcgaca ttgccgatga agacctgatt ccgcaacgcg aaatggtcgt
    12481 taccctgaca catggcggct atatcaaaac ccagccgacc accgactatc aggcgcagcg
    12541 tcgcggcggg cgcggcaaac aggcggctgc caccaaagac gaagacttta tcgaaaccct
    12601 gtttgttgcc aacacgcatg attatttgat gtgctttacc aatttgggca agtgtcattg
    12661 gattaaggtt tacaaactgc ccgaaggcgg acgcaacagc cgcggccgtc cgattaacaa
    12721 cgtcatccag ttggaagaag gcgaaaaagt cagcgcgatt ctggcagtac gcgagttccc
    12781 cgaagaccaa tacgtcttct tcgccaccgc gcagggaatg gtgaaaaaag tccaactttc
    12841 cgcctttaaa aacgtccgcg cccaaggcat taaagccatc gcgctcaaag aaggcgacta
    12901 cctcgtcggc gctgcgcaaa caggcggtgc ggacgacatc atgctgttct ccaacttagg
    12961 taaagccatc cgcttcaacg aatactggga aaaatccggc aacgacgaag cggaagatgc
    13021 cgacatcgaa accgaaattt cagacggcat cgaagatgaa accgccgaca gcgaaaacgc
    13081 actgccgagc ggcaaacacg gtgttcgccc gtccggtcgc ggcagcggcg gtttgcgcgg
    13141 tatgcgcctg cctgccgacg gcaaaatcgt cagcctgatt accttcgccc ctgaaaccga
    13201 agaaagcggt ttgcaagttt taaccgccac cgccaacgga tacggaaaac gcaccccgat
    13261 tgccgattac agccgcaaaa acaaaggcgg gcaaggcaat attgccatta acaccggcga
    13321 gcgaaacggc gatttggtcg ccgcaacctt ggtcggcgaa accgacgatt tgatgctgat
    13381 taccagcggc ggcgtactta tccgcaccaa agtcgaacaa atccgcgaaa ccggccgcgc
    13441 cgcagcaggc gtgaaactga ttaacttgga cgaaggcgaa accttggtat cgctggaacg
    13501 tgttgccgaa gacgaatccg aactctccga cgcttctgta atttccaatg taaccgaacc
    13561 ggaagtcgag aactgaaaat catctcccga tgccgtctga agattcagac ggcatttatt
    13621 ttatccctca tccgtcatcc ggcttctcac aatatagcgg attatagtca attaaaaaca
    13681 aggggctgtc ctagataact agggaaattc aaattaagtt agagttgccc ctatgagaaa
    13741 aagtcgtcta agccggtata aacaaataaa ctcattgaac tgtttgtcgc aggtgtaact
    13801 gcaagaacga cagcagagtt agtaggcgtt aataaaa
//
LOCUS       DAWITQ010000036        13645 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.036, whole genome shotgun sequence.
ACCESSION   DAWITQ010000036 DAWITQ010000000
VERSION     DAWITQ010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13645)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13645)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13645
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.036"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            271..5754
                     /gene="iga"
                     /locus_tag="WIX18_000867"
     CDS             271..5754
                     /gene="iga"
                     /locus_tag="WIX18_000867"
                     /EC_number="3.4.21.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgA-specific serine endopeptidase
                     autotransporter"
                     /protein_id="HEZ5238003.1"
                     /translation="MKTKRFKINAISLSIFLAYALTPYSEAALVRDDVDYQIFRDFAE
                     NKGKFFVGATDLSVKNKQGQNIGNALSNVPMIDFSVADVNKRIATVVDPQYAVSVKHA
                     KAEVHTFYYGQYNGHNDVADKENEYRVVEQNNYEPHKAWGASNLGRLEDYNMARFNKF
                     VTEVAPIAPTDAGGGLDTYKDKNRFSSFVRVGAGRQLVYEKGAYHQEGNEKGYDLRDL
                     SQAYRYAIAGTPYKDINIDQTMNTEGLIGFGNHNTHYSAEELKQALSQDALTNYGVLG
                     DSGSPLFAFDKQKNQWVFLGTYDYWAGYGKKSWQEWNIYKKEFADKIKQRDNAGTIKG
                     NREHHWNITFGTNSKIGSTAVRLANNERDANNGQNVTFEDNGTLVLDQNINQGAGGLF
                     FKGDYTVKGANNDITWLGAGIDVADGKKVVWQVKNPNGDRLAKIGKGTLEINGTGVNQ
                     GQLKVGDGTVILNQQADADKKVQAFSQVGIVSGRGTLVLNSPDQINPNNLYFGFRGGR
                     LDANGNDLTFEHIRNVDEGARIVNHNTDRASTITLTGKSLITAPQNLSVYEIRNDYDD
                     DDYYGYYSYRKPIPQGKDLYYKNYRYYALKSGGSVNAPMPENGQTENNDWVFMGYKQE
                     EAQKNAMNHKNNQRISGFSGFFGEENGKGHNGALNLNFNGKSAQNRFLLTGGTNLNGK
                     ISVTQGNVLLSGRPTPHARDFVNKSSARKDAHFSKNNEVVFEDDWINRTFKATEIAVN
                     QSASFSSGRNVSNITANITATDNAKVNLGYKNGDEVCVRSDYTGYVTCNTDNLSDKAL
                     NSFGATQINGNVNLSQNAALVLGKAALWGQIQGQGNSSVSLNQHSKWHLTGDSQVHNL
                     SLADSHIHLNNASDAQSANKYHTLKINHLSGNGHFHYLTHLAKNLGDKVLVKESASGH
                     YQLHVQDKTGEPNQEGLNLFDASSVQDRSHLSVSLANNHVDLGALRYTIKTENGITRL
                     YNPYAENRRRVKPAPSPATNTASQAQKATQTDGAQIAKPQNIVVAPPSPQANQAEEAK
                     RQQAKAEQVKRQQAEAERKSAELAKQKAEAEREARELATRQKAEQERSSAELARRHEK
                     EREAAELSAKQKVEAEREAQALAVRRKAEAEEAKRQAAELARRHEKEREAAELSAKQR
                     VGEEERRQTAQSQPQRRKRRAAPQDYMAASQDRPKRRGHRSVQQNNVEIAQAQAELVR
                     RQQEERKAAELLAKQRAEAEREAQALAARRKAEAEEAKRQAAELAHRQEAERKAAELS
                     ANQKAAAEAQALAARQQKALARQQEEARKAAELAVKQKAETERKTAELAKQRAAAEAA
                     KRQQEARQTAELARRQEAERQAAELSAKQKAETDREAAESAKRKAEEEEHRQAAQSQP
                     QRRKRRAAPQDYMAASQNRPKRRGRRSTLPAPPSPSFDSSAYAAPRALHNPDWYENDY
                     EEIPLDALEDENVSESVDTSDKQPQDNTELHEKYENDYEEIPLDALEDEDVSESVDTS
                     DKQPQDNTELHEKVETVSLQPRAAQPRAQAATQPQAQAAAQADAVSTNTNSALSDAMA
                     STQSILLDTGASLTRHIAQKSRADAEKNSVWMSNIGYGRDYASAQYRRFSSKRTQTQI
                     GIDRSLSENMQIGGVLTYSDSQHTFDQASGKNTFVQANLYGKYYLNDAWYVAGDIGAG
                     SLRSRLQTQQKANFNRTSIQTGLTLGNTLKINQFEIVPSAGIRYSRLSSADYKLGNDS
                     VKVSSMSVKTLTAGLDFAYRFKVGNLTVKPLLSAAYFANYGKGGVNVGGNSFAYKADN
                     QQKYSAGAALLYRNVTLNVNGSITKGKQLEKQKSGQIKIQIRF"
     gene            complement(5932..7134)
                     /gene="trpB"
                     /locus_tag="WIX18_000868"
     CDS             complement(5932..7134)
                     /gene="trpB"
                     /locus_tag="WIX18_000868"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEZ5238004.1"
                     /translation="MKNYHAPDEKGVFGEHGGLYVSETLIPALQELADAYKAAKNDPS
                     FWEEFHRDLKHYVGRPSPVYHAARLSEHLGGAQIWLKREDLNHTGAHKVNNTIGQALL
                     AKRMGKKRVIAETGAGQHGVASATVAARFGMTCDVYMGADDIQRQMPNVFRMKLLGAN
                     VVGVDSGSRTLKDAMNEAMREWVARVDDTFYIIGTAAGPAPYPEMVRDFQCVIGNEAK
                     EQMLEAIGRQPDVAVACVGGGSNAIGLFHPYIGEENVRLVGVEAGGLGVNTPDHAAPI
                     TSGSPIGVLHGFRSYLMQDENGQVLGTHSVSAGLDYPGIGPEHSHLHDIKRVEYTVAK
                     DDEALEAFDLLCRFEGIIPALESSHAVAWAVKNAPKMGKDQVILVNLSGRGDKDINTV
                     AKLKGIKL"
     gene            complement(7319..8008)
                     /locus_tag="WIX18_000869"
     CDS             complement(7319..8008)
                     /locus_tag="WIX18_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA glycosylase"
                     /protein_id="HEZ5238005.1"
                     /translation="MLFEGLPCLAVWCKNRLSAVLPVGGLNVSENLLEIETHPFDSVL
                     PPKAAVMMMGTFPPKEDKRAMQFHYPNFQNDMWRVYGLVFFNDAAHFQRLSEKAFDAE
                     KIKAFLRERGIASCPTVLKAAREHGNASDKFLKVVETVDLAAVLAKIPECRHICTTGG
                     KATEILLDIQGGGIKMPKTGETVPFPFAGRDLTLTRLPSTSRAYPLSLAKKAAAYRAF
                     FEMAGLCEKQL"
     gene            8205..8984
                     /gene="rsmA"
                     /locus_tag="WIX18_000870"
     CDS             8205..8984
                     /gene="rsmA"
                     /locus_tag="WIX18_000870"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HEZ5238006.1"
                     /translation="MKEHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLA
                     AITEPLAKKLNRLHVVEIDRDIVCRLKTLPFADKLVIHEGDVLQFDFNGIAGKKKIVG
                     NLPYNISTPLLFKLAEVADDVVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDM
                     EMLIDVPPESFDPAPKVDSAVVRMIPVKHRIGRADDFEYFAKLVKLAFHQRRKTIRNN
                     LKELAGDDDLQAVDINPQDRAEHIAPEKYVALSNYLAGKAV"
     gene            9157..9885
                     /locus_tag="WIX18_000871"
     CDS             9157..9885
                     /locus_tag="WIX18_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEZ5238007.1"
                     /translation="MIKFKNVHKHFKDLHVINGVNLEIKKGEVVVVCGPSGSGKSTLI
                     RTVNQLESIESGEIWVDGVNVADPKTDLNKIREEVGFVFQSFNLYPHLTVLENITLAP
                     MKVKGQNAEQAEKKAMELLERVGLAHKKDAFPSQLSGGQQQRVAIARGLAMEPRVMLF
                     DEPTSALDPEMVGEVLKVMKDLAESGMTMMCVTHEMGFAREVADRVLFVDKGQILEDE
                     TPEAFFTNPKHERAKQFLQQVMTH"
     gene            9958..10317
                     /locus_tag="WIX18_000872"
     CDS             9958..10317
                     /locus_tag="WIX18_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238008.1"
                     /translation="MYFVDRTAVVLKPTVRFLEWLKSTDENMPDLTIEQLRANCSVFL
                     VPQFDEPEAVVSYFDERYRQIFEAELAGWDIDKDKWPQDMGLKAFWEFFDIEIHDMVL
                     DMEEAELNITPVFDNMM"
     gene            10322..10762
                     /locus_tag="WIX18_000873"
     CDS             10322..10762
                     /locus_tag="WIX18_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator FolI"
                     /protein_id="HEZ5238009.1"
                     /translation="MRAFQTALRPSRILNILTVSLHAASLAVCLTWFYGWMMWFGLAA
                     LVASYAYSLRITNLKHRHAITAITIDRDGQAEIVSGKDKTAATLAGSSMVTPYALFLQ
                     WDTGGTTVSQCIIPDMTDKESYRRLKVWILWRQPKKTAETDTPS"
     gene            10794..12068
                     /gene="folC"
                     /locus_tag="WIX18_000874"
     CDS             10794..12068
                     /gene="folC"
                     /locus_tag="WIX18_000874"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HEZ5238010.1"
                     /translation="MKTLQDWLSHLETAHSGGLIDMGLERVGEVKKRMKLTPQCPVVV
                     VAGTNGKGSVCAYLTQIYKQAGYKTGTLTSPHLLRYNERIAINAEPVSDDTIIASFER
                     IEAARSEISLTYFEFNTLAAVDIFMREQVDVMILEVGLGGRLDAVNAFDGDCAVVTSV
                     DLDHQAFLGDTVEQVGFEKAGVFRSGKPAICGQNPAPKSLLSHAEAIGAKLLMVQRDF
                     EFHALENIQWNYHFRPQHSDSPARNRNSLPFPALRGAYQLSNAACALTVLECLNDKLP
                     VDIGAIKRGLLLVENPGRFQVLPGRPLTVLDVGHNPHAARALRRSLINLAFAQKRTAV
                     FSMLSDKDIDGVLEIVKDQFDEWYIAPLDMPRGMTLESLQNKLHEHSIENIQTFAAVR
                     EAYRAAASKAGENDRIVVFGSFHTVADVMSVL"
     gene            12081..13079
                     /gene="ftsN"
                     /locus_tag="WIX18_000875"
     CDS             12081..13079
                     /gene="ftsN"
                     /locus_tag="WIX18_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HEZ5238011.1"
                     /translation="MSENKQNEVLSGYEQLKRRNRRRLVTASCLVAASCILLAAALSS
                     GPAEQTAGETSGVENKAAGAAQTPALKSAADKPQDLAGEDKPSAADSEISEPENVGAP
                     LVLINERLEDSNIKGLEASEKLQQAETAKTAPKQAKQRAAEKVPATADSTDTVAFEKP
                     KRTAETKPQKAERTAKAKPKAKETKTAEKVADKPKTAAEKTKPDTAKSDSAVKEAKKA
                     DKAESKKTAEKDRSDGKKHETAQKTDKADKTKTAEKEKSGKKAAIQAGYAEKERALSL
                     QRKMKAAGIDSTITEIMTDNGKVYRVKSSNYKNARDAERDLNKLRVHGIAGQVTNE"
     gene            13072..13569
                     /locus_tag="WIX18_000876"
     CDS             13072..13569
                     /locus_tag="WIX18_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HEZ5238012.1"
                     /translation="MNSLPIADLLVSAVIAACIVISTMRGVITEAGSMAAWVVSFFFA
                     KLFAAPFADIAFASFQPRLFALALSFISLFVIACLIQKILRSLLTGAVSAVGLGFANR
                     ILGGVFGALKGILIITLLVMLASKTDLPDTEEWRQSYTLPFFVSLSEAVLNHSGGTAE
                     TPEDD"
BASE COUNT         3957 a         3585 c         3305 g         2798 t
ORIGIN      
        1 cagaaaccta aaatcccgtc attcccgcac aagcgggaat ccaaaaacaa aaagccgcag
       61 aaatttaacg gaagaaccga accccgaaaa tcggcttccc accttcgcct gaataacaga
      121 acaaaggaag cggaaataaa aacatcggga ttcttttttt aaattggcaa taaaacacca
      181 aaatgaatga tttacacaac aaaaaatagt caacaccacc aaaccggcgt aaaatacaaa
      241 acattatcac ccttaaaacg gtaaaacctt atgaaaacca aacgttttaa aattaacgcc
      301 atatccttat ccatctttct tgcctatgcc cttacgccat actcagaagc ggcattggtc
      361 agagacgatg tcgattatca aatattccgt gactttgcag aaaacaaagg caaatttttt
      421 gtcggcgcaa ccgatttatc agtgaaaaac aaacaaggtc aaaacatcgg caacgcatta
      481 tccaacgtac cgatgattga ttttagcgtt gcagatgtca acaaacgcat agcaacggta
      541 gtcgatcccc aatatgctgt cagcgtcaaa cacgccaaag cagaagtcca tactttttat
      601 tacggtcaat acaacggtca taatgatgta gccgacaaag aaaatgaata ccgcgttgtc
      661 gaacaaaata actatgaacc ccataaagct tggggtgcga gcaacttagg tcgcctcgaa
      721 gattataata tggcgcgttt taacaagttt gtaactgaag ttgcgccgat tgcaccaact
      781 gatgccggcg gcggattgga tacctacaaa gataaaaacc gtttttcctc ttttgtcaga
      841 gttggcgcag gcaggcaatt agtttatgaa aaaggggctt atcatcaaga aggaaatgaa
      901 aaaggctacg atttgcgcga tctttcacaa gcctatcgtt atgccattgc aggtacacct
      961 tataaagata ttaatattga ccaaacaatg aataccgaag gtttgattgg ctttggtaat
     1021 cacaatacac actattcagc agaagaactt aaacaagcac tctcgcaaga tgcgttaaca
     1081 aattacggcg tgttgggcga tagcggctct ccgttatttg cttttgacaa acaaaaaaat
     1141 caatgggtct ttttgggaac ttatgattat tgggcaggtt acggaaaaaa atcttggcaa
     1201 gaatggaata tctataaaaa agaatttgca gataaaatca aacaacgcga taacgccggc
     1261 accatcaaag gtaatagaga acatcattgg aacattactt ttggcacaaa cagcaagatt
     1321 ggttctacag cggtaaggct tgccaacaat gaaagggatg caaacaacgg acagaatgtt
     1381 acctttgaag acaacggcac tttggtattg gatcaaaaca tcaaccaagg cgcgggcggt
     1441 ctgtttttca aaggcgatta cacagtcaaa ggtgcaaata atgacatcac ttggctaggt
     1501 gcggggattg atgttgccga cggcaaaaaa gtcgtttggc aagtcaaaaa tccgaatggc
     1561 gacagattgg caaaaatcgg caaaggcaca ttagaaataa acggcacagg cgttaaccaa
     1621 gggcaattaa aagtcggcga cggtacggtt attctgaatc aacaagccga tgccgacaaa
     1681 aaagtccagg ctttctccca agtcggcatt gtgagcgggc gcggtacatt ggtgctgaac
     1741 agtccggacc agattaaccc gaataatctg tatttcggtt tccgtggcgg tcgtttggat
     1801 gccaatggca atgacttgac ttttgaacac atccgcaacg tggatgaagg cgcgcgcatt
     1861 gtcaaccaca acacagaccg cgcctccaca atcacattaa ccggcaaatc attaattacc
     1921 gctcctcaaa atctttctgt ttatgaaatc cgaaatgatt acgatgatga cgattattat
     1981 ggctattaca gctatagaaa acccattccg caaggcaaag atctttatta caaaaactat
     2041 cgttattacg ccctaaaatc cggcggcagc gtgaacgcac cgatgcccga aaacggacaa
     2101 acggaaaata acgactgggt ctttatggga tataagcaag aagaagccca gaaaaacgcg
     2161 atgaaccaca aaaacaatca gcgtattagc ggttttagcg gtttctttgg cgaagaaaac
     2221 ggaaaaggac ataacggcgc attaaacctt aatttcaacg gcaaaagcgc gcaaaaccgt
     2281 ttcttgttaa caggcggcac gaatttaaac ggaaaaataa gcgtaactca aggcaatgtc
     2341 ttgttatcag gtcgtccaac accacacgca agagattttg tgaacaaatc ttcagcccga
     2401 aaagacgcac atttctccaa aaacaatgaa gtcgtatttg aagacgactg gataaaccgc
     2461 acattcaaag ccacagaaat tgcggttaat caatccgcat cattctcttc cggcagaaat
     2521 gtatccaaca ttaccgccaa catcaccgca acagacaacg ccaaagtaaa tttgggttac
     2581 aaaaacggcg atgaagtttg cgtgcgctcg gactataccg gttacgttac ctgcaacaca
     2641 gacaacttat ccgataaggc tttaaacagc tttggagcga cacagattaa cggcaatgtg
     2701 aatttgagtc agaatgcggc attggtctta ggcaaggctg cattatgggg gcaaattcaa
     2761 gggcaaggaa acagcagcgt cagcctaaac caacatagca aatggcattt gaccggcgac
     2821 agccaagtac acaatctgtc attggcggat agccatattc atttgaacaa cgcttccgat
     2881 gcgcaaagtg caaataaata ccacacgctc aaaatcaatc atttatccgg taacgggcat
     2941 tttcattatc tgacgcacct ggcgaaaaat cttggggata aagtgcttgt gaaggaatcc
     3001 gcatccggtc attatcagct ccatgttcaa gataaaacag gcgaacccaa tcaggaaggg
     3061 ctgaatctct ttgatgcatc atccgtacaa gaccgatcgc acctttccgt ttccttggcg
     3121 aataaccatg tagatttagg cgcattgcgt tatacaatca aaacagaaaa cggtattacc
     3181 cgattgtaca atccttatgc cgagaaccgc cgccgagtca aaccggcccc gtctcctgcc
     3241 acaaacacgg cttctcaagc acaaaaggca acacaaacgg acggtgcaca aattgccaag
     3301 cctcaaaata tcgtcgtcgc accacctagc ccgcaggcaa atcaagccga agaagcaaaa
     3361 cgccaacaag caaaagcgga gcaagtgaag cgtcagcaag cagaagcaga gcgtaaatcg
     3421 gcagagttag caaaacaaaa agcagaagcc gaacgcgaag caagagagct ggcgacccgc
     3481 caaaaagcag aacaagaacg cagcagcgcc gaacttgcac gtcgacatga aaaagaacgc
     3541 gaagcggcag agttgtcggc aaaacaaaaa gtcgaagccg aacgtgaggc tcaagcattg
     3601 gcggtacgcc gaaaagccga agccgaagag gcaaaacgcc aagctgcaga gcttgcacgc
     3661 cggcatgaaa aagaacgcga agcggcagag ttgtcggcaa aacaaagggt cggggaagag
     3721 gaacgccgtc aaacagccca atcccagccg caacgccgca aacgccgtgc cgcaccgcag
     3781 gattatatgg cagcttccca agaccgtcct aaacgccgcg gacaccgttc ggtacagcaa
     3841 aacaatgtgg aaattgccca agcccaagca gaacttgtgc gccgacagca ggaagaacgc
     3901 aaagcggcag agttgttggc aaaacaaagg gcagaagccg aacgtgaggc tcaagcattg
     3961 gctgcgcgcc gaaaagcaga agccgaagag gcaaaacgcc aagctgccga acttgcacat
     4021 cgccaggaag cagaacgcaa agcggcagaa ttgtcggcaa accaaaaagc cgcagctgaa
     4081 gcccaagcat tggcggcacg ccaacaaaaa gcccttgcgc gtcaacagga agaagcacga
     4141 aaagctgcag agttagccgt caaacaaaaa gcggaaaccg aacgcaaaac cgccgaactt
     4201 gccaagcaaa gggcagcagc cgaagcagca aaacgccagc aagaagctcg ccagaccgcc
     4261 gaacttgcac gtcgtcaaga agcggaacgc caagcagcag agttgtcggc aaaacaaaaa
     4321 gccgaaacag atcgagaagc ggcagaatcg gcgaaacgaa aagctgagga agaagagcac
     4381 cgtcaagcag cccaatccca gccgcaacgc cgaaaacgcc gtgccgcacc tcaggattat
     4441 atggcagctt cccaaaatcg tccgaaacgt cgcggacgca gatctactct gccggcaccg
     4501 ccctcgccat catttgattc gtcagcttac gcagcaccca gggccttgca taatccggac
     4561 tggtatgaaa atgactatga agaaatcccc ttggatgcgt tggaagatga aaatgtatct
     4621 gaatcagttg acacatcaga caaacagcct caagacaata cggaacttca tgaaaaatat
     4681 gaaaatgatt atgaagaaat ccccttggat gcgttggaag atgaagatgt atccgaatcg
     4741 gttgacacat cagacaaaca gcctcaagac aatacggaac ttcatgaaaa agttgagaca
     4801 gtgagtttgc aaccaagagc cgcgcagccg cgagcccaag ccgccactca gccgcaagcc
     4861 caagccgccg cgcaagccga tgcagtcagc accaatacca actcggcttt atctgacgca
     4921 atggcaagca cgcaatctat cttgttggat acaggtgctt cattaacacg gcacattgca
     4981 caaaaatcac gcgctgatgc cgaaaaaaac agcgtttgga tgtcgaacat cggttatggc
     5041 cgtgattatg cttccgcaca atatcgccgg tttagttcga aacgcacgca aacacaaatc
     5101 ggcattgacc gcagcttgtc cgaaaatatg cagataggcg gcgtattgac ttactctgac
     5161 agtcagcata cttttgatca ggcgagcggc aaaaatactt ttgtgcaagc caacctttat
     5221 ggtaagtatt atttaaatga tgcttggtat gtggccggcg atattggtgc aggcagcttg
     5281 agaagccggt tacaaacaca gcaaaaagca aactttaacc gaacaagtat ccaaaccggc
     5341 cttactttgg gcaatacgct gaaaatcaat caattcgaga ttgtccccag tgcgggaatc
     5401 cgttacagcc gcctgtcatc tgcagattac aagttgggta acgacagtgt taaagtaagt
     5461 tctatgtcag tgaaaacact gacggccgga ctggattttg cttatcggtt taaagtcggc
     5521 aaccttaccg taaaaccctt gttatctgca gcttactttg ccaattatgg caaaggcggc
     5581 gtgaatgtgg gcggtaattc cttcgcctat aaagcagata atcaacagaa atattcagca
     5641 ggtgccgcgt tactgtaccg taatgttaca ttaaacgtaa atggcagtat tacaaaaggc
     5701 aaacaattgg aaaaacaaaa atccggacaa attaaaatac agattcgttt ctaaaatact
     5761 aaattcatag caaaataaaa tgccgtctga actcaggctt cagacggcat ttttatagtg
     5821 gattaacaaa aatcaggaca aggcgacgaa gccgcagaca gtacagatag acggcaaggc
     5881 gaggcaacgc cgtactggtt tttgttaatc cactatatca gacggacgag gttacagttt
     5941 aatccctttg agcttcgcga cggtattgat gtctttgtcg ccacgacctg agaggttgac
     6001 cagaatcact tggtctttac ccattttcgg cgcatttttc accgcccaag caacggcgtg
     6061 gctggattcg agcgcgggga tgatgccctc gaagcggcag agcaagtcaa aggcttcgag
     6121 tgcttcgtcg tctttggcaa cggtgtattc gacgcgcttg atgtcgtgca gatggctgtg
     6181 ttccgggccg atgccggggt aatccaagcc tgcggaaaca gagtgtgtac ccaagacttg
     6241 accgttttcg tcctgcatca gatagctgcg gaaaccgtgc aatacgccaa tcggtgagcc
     6301 cgaagtaatc ggcgcggcgt gatcgggggt gttcacgccc aaaccgccag cctccacgcc
     6361 gacgaggcgc acgttttctt cgccgatata cgggtggaac aaaccaatgg cgttcgatcc
     6421 gccgcccacg caggcaacgg caacgtcggg ctgtctgccg atggcttcca acatttgttc
     6481 tttggcttca ttgccgatca cgcattgaaa gtcgcgcacc atttcgggat acggcgcggg
     6541 accggcggcg gtaccgatga tgtagaatgt gtcatccacg cgggcgaccc attcgcgcat
     6601 ggcttcgttc atcgcgtctt tcaaagtacg gctgccgctg tcaacgccga cgacattcgc
     6661 gcccaataat ttcatacgga acacgttggg catttggcgt tggatgtcgt ccgcacccat
     6721 gtacacgtcg caagtcatgc cgaagcgggc ggcaacagtg gcactcgcca cgccgtgctg
     6781 acccgcgccg gtttcggcga tgacgcgttt tttacccata cgttttgcca acagtgcctg
     6841 accgatggtg ttgttgactt tgtgcgcgcc ggtgtggttc aagtcttcgc gcttcaacca
     6901 aatttgcgcg ccacccaaat gctcggacaa tcgcgcggca tggtaaacgg ggctgggcct
     6961 gccgacgtag tgtttcaaat cgcggtggaa ttcttcccaa aacgacgggt cgtttttcgc
     7021 tgccttatag gcatccgcca gctcttgcaa ggcgggaatc agggtctcgg aaacataaag
     7081 cccaccgtgt tcgccgaaaa cgcccttctc gtcgggtgcg tggtaattct tcatcagatt
     7141 tcgtccttgt gcttcaaatt ttcagacggc aatttatagt ggattaacaa aaaccggtac
     7201 ggcgttgccc cgccttgccg tactatttgt actgtctgcg gcttcgccgc cttgtcctga
     7261 tttttgttaa tccactatat ttttcaaaca tgccgtccga acgggaaatt gtcggcaatt
     7321 ataactgctt ttcacacaag cccgccattt caaaaaacgc ccgatacgcc gccgcttttt
     7381 tcgccaaact caaaggatag gcacgcgaag tcgaaggcag gcgcgtcagc gtcaaatccc
     7441 gtccggcaaa cggaaacggc acggtttcgc ccgttttcgg cattttgatg ccgccaccct
     7501 gaatatcgag caggatttcc gtcgccttgc cgcctgtcgt acaaatatgg cggcactcgg
     7561 gtatttttgc caacaccgcc gccaaatcga cggtttcaac tacctttaaa aacttgtcgg
     7621 acgcattgcc gtgttccctt gccgccttca acacggtcgg acaggacgca attccccgtt
     7681 cgcgcaaaaa cgccttgatt ttctcggcat caaacgcttt ttcagacaac ctttggaaat
     7741 gcgccgcatc attaaaaaac accagcccgt aaacgcgcca catatcgttt tggaaattcg
     7801 gataatgaaa ctgcatcgcg cgtttgtctt ccttgggcgg aaacgtcccc atcatcatga
     7861 ccgcagcctt cggcggcaac acggaatcga agggatgggt ttcgatttca agcagatttt
     7921 cagacacgtt caatcctcca acaggcaaaa cggcagacag ccggtttttg caccaaaccg
     7981 ccaaacacgg caagccttca aacagcatta tcacgccctg ccgttttcgg ttacaatgcc
     8041 gacatcaaac ggatactgta aacacattta tgttccaaca cacaggacga cacttaaagc
     8101 accgccctat gtgccatcct gatttggaag gggttacgcc cctcccaaat agagtctgat
     8161 tctaccgccc taaagggcgg ggtttcaacc gaaaaggaaa cacgatgaaa gaacacaaag
     8221 cccgcaagcg tttcgggcag aattttttgc aggacacgcg gattatcagc gatattgtca
     8281 acgccgtgcg cccgcaggcg gatgatgtcg tgattgaaat cggtccgggt ttggcggcga
     8341 ttaccgaacc tttggcgaaa aagctgaacc gcctgcacgt tgtcgaaatc gaccgcgaca
     8401 tcgtatgccg tctgaaaacg ctgccgtttg cggacaagct cgtcattcat gaaggcgacg
     8461 tgttgcagtt tgatttcaac ggcatcgcag gcaaaaagaa aatcgtcggc aacctgccgt
     8521 acaacatttc cacgccgctt ttgttcaagc tggcggaggt ggcggacgat gtcgtcgata
     8581 tgcactttat gctgcaaaaa gaagtggtcg agcgtatggt tgccgcgccg aaaagcaacg
     8641 actacggccg cttgggcgtg atgttgcaat atttcttcga tatggaaatg ctgattgacg
     8701 tgccgcccga atcgttcgac cccgcgccga aagtcgattc cgccgtcgtc cgcatgattc
     8761 cggtgaaaca ccgcatcggc agggcggacg atttcgagta tttcgccaaa ctcgtgaaac
     8821 tcgccttcca ccaacgccgc aaaaccatac gcaacaatct gaaagagctt gcaggcgacg
     8881 atgatttgca ggcagtcgac atcaatccgc aagaccgtgc cgaacatatc gcgccggaga
     8941 aatatgtggc gttgagcaat tatctagcgg gcaaggccgt ctgaaaaggg agtaagccga
     9001 tgacgaaata cctgctttta cccctgatac tgccgcttgc agcctgcctg accaatccga
     9061 acgaccgttt ttttgacggc agacgctaca cgcttcatca tatggagctc ccgtaacgac
     9121 aacctgcaac ggcaaatgcc gtctgaaaga aaagacatga tcaaattcaa aaacgtacac
     9181 aaacatttca aagacctgca cgtcatcaac ggcgtgaact tggaaatcaa aaaaggcgaa
     9241 gtggtcgtcg tctgcggacc ttcgggcagc ggcaaatcca cactcatccg caccgtcaac
     9301 cagcttgaaa gcatcgaaag cggcgagatt tgggtggacg gtgtcaacgt tgccgaccca
     9361 aaaaccgatt tgaacaaaat ccgcgaagaa gtcggctttg tgtttcaaag tttcaacctc
     9421 tacccgcacc tgaccgtgtt ggaaaacatt accctcgcac cgatgaaggt taaaggtcaa
     9481 aatgcggaac aggcagagaa aaaagcgatg gaacttttgg aacgcgtcgg actggcacac
     9541 aaaaaagacg ccttcccttc ccaactttcc ggcggccagc agcaacgcgt ggcgattgca
     9601 cgcggtttgg cgatggaacc gcgcgtaatg ttgtttgacg aaccgacctc cgcactcgac
     9661 cccgaaatgg tcggcgaagt gttgaaagtg atgaaagact tggcggaaag cggtatgacg
     9721 atgatgtgcg taacccacga aatgggtttt gcccgcgaag ttgccgaccg agtgcttttt
     9781 gtcgataaag ggcaaatcct cgaagacgaa acgcccgaag cgttttttac caacccgaaa
     9841 cacgaacgcg ccaaacaatt cctgcaacag gtcatgaccc actgatgcta tgccgtctga
     9901 aaaccgaacg ttcagacggc atagcccgac accgcaagat gattgagaaa gaaaaccatg
     9961 tattttgttg accgcaccgc cgtcgtcctc aagccgaccg tccgcttttt ggaatggctc
    10021 aaaagcaccg acgaaaatat gcccgacctg accatagaac agcttcgtgc caactgttcc
    10081 gtcttcctcg ttccgcagtt cgacgaaccg gaagccgtcg tttcctattt cgacgaacgc
    10141 taccgccaga ttttcgaggc ggagctggca ggttgggaca tcgataagga taaatggccg
    10201 caagatatgg ggctgaaggc gttttgggaa tttttcgaca tcgaaatcca cgatatggtg
    10261 ttggacatgg aagaagcgga attgaacatt acccccgtgt tcgacaacat gatgtaaggc
    10321 tgtgcgcgcc tttcagacgg cattgaggcc gtcccgcatc ctgaacatcc tgactgtatc
    10381 gcttcacgcc gcctcccttg ccgtctgcct gacttggttt tacggctgga tgatgtggtt
    10441 cggtttggcg gctttggtgg caagttacgc atactcgctc aggataacga atctgaaaca
    10501 ccgccatgcc ataaccgcca ttaccataga ccgcgacgga caggcggaaa tcgtatccgg
    10561 caaagacaaa acagcggcaa cacttgcggg cagcagtatg gttacgcctt atgccttatt
    10621 cttacaatgg gacacaggcg gcacaaccgt cagccaatgc atcatacccg acatgacgga
    10681 caaagaatcc taccggcggc tgaaagtctg gatactttgg cggcagccga aaaaaaccgc
    10741 cgaaaccgat acaccaagct gatttcagac ggcatttgaa cacggaacac tcaatgaaaa
    10801 cactgcaaga ctggctctcg catttggaaa ccgcccacag cggcggcttg atcgatatgg
    10861 gcttggaacg cgtaggcgaa gtgaaaaaac ggatgaagct cacgccgcaa tgccccgtcg
    10921 tcgttgtcgc gggaacaaac ggcaaaggtt cggtctgcgc ctacctgaca cagatttaca
    10981 aacaggcggg ctacaaaacc ggcacactga ccagcccgca tttattgcgt tacaacgaac
    11041 gcatcgccat caacgccgaa cccgtttcgg acgatacgat tattgcctct ttcgagcgca
    11101 tcgaagcggc gcgcagcgaa atatcgctga cttattttga attcaatacg ttggcggccg
    11161 tcgacatctt catgcgcgaa caggttgacg tgatgatatt ggaagtcggc ttgggcggac
    11221 gcttggacgc ggtcaacgcg tttgacggcg attgcgcggt ggttaccagc gtggatttgg
    11281 accatcaggc atttttgggc gatacggtcg agcaggtcgg ctttgaaaaa gcaggcgtgt
    11341 tccgtagcgg caaacccgcc atctgcggtc aaaaccccgc gcccaaatcg ttgctttcac
    11401 acgccgaagc cataggcgcg aaactgctga tggtgcagcg cgatttcgag tttcacgcgc
    11461 tggaaaacat ccaatggaac taccacttcc gaccgcagca ttcagacagc cccgctcgca
    11521 accgtaattc cctgcccttc cccgcattgc gcggcgcata ccaactttcc aatgccgcct
    11581 gtgcgctgac cgtgttggaa tgtttgaacg acaaattgcc ggtggacatc ggtgcaatca
    11641 aacgcggatt gctgctggtt gaaaatcccg gacgcttcca agtcctgccc ggccggccgc
    11701 tgaccgtttt ggacgtcgga cacaatcccc acgctgcccg cgccctgcgc cgcagcctga
    11761 ttaatttggc gtttgcgcaa aaacgcaccg ccgtgttcag tatgctgtcc gacaaagaca
    11821 tagacggcgt gttggaaatt gtcaaagacc agtttgacga atggtatatc gcacctttgg
    11881 acatgccgcg cggcatgacg ctcgagagcc tgcaaaacaa actgcacgaa cacagcatcg
    11941 aaaacataca gacattcgcc gccgtccgcg aagcataccg ggcggcagcc tcaaaagcgg
    12001 gcgagaacga cagaatcgtc gttttcggct catttcatac cgttgccgat gtcatgtcgg
    12061 tactttaaaa ggaaacttct atgtccgaaa acaaacaaaa cgaagtcctg agcggttacg
    12121 aacaactcaa acggcgcaac cgccgccgcc tcgtaacggc aagttgcttg gttgccgcct
    12181 cctgcatcct gctggcagcc gccctcagtt ccggccctgc cgaacagact gccggcgaaa
    12241 caagcggcgt agaaaacaaa gcggcaggtg cggcacaaac ccctgccttg aaatccgccg
    12301 ccgacaaacc gcaggacttg gcaggcgaag acaagccttc tgccgccgac agcgaaatca
    12361 gcgagcctga aaacgtaggc gcgccgctgg tgctgattaa cgagcgcctc gaagacagca
    12421 acatcaaagg tttggaagca tccgagaaac tgcaacaggc agaaaccgcc aaaaccgcac
    12481 cgaagcaggc aaaacaacgc gctgccgaaa aagtgccggc aactgccgac agtacggata
    12541 cggtagcgtt tgaaaaaccg aaacgcactg ccgaaacaaa accgcaaaaa gcggaacgca
    12601 ctgccaaagc caagcccaaa gccaaagaaa ccaaaaccgc cgaaaaagtt gccgacaaac
    12661 cgaaaactgc cgccgaaaaa accaaaccgg atacggcaaa atccgacagc gcggtaaaag
    12721 aagcgaaaaa agccgacaag gctgaaagca aaaaaacagc cgaaaaagac cgttcggacg
    12781 gcaaaaaaca cgaaacggca caaaaaaccg acaaagcgga caagaccaaa accgccgaga
    12841 aggaaaaatc cggtaaaaaa gccgccattc aggcaggtta tgccgaaaaa gaacgcgcct
    12901 taagcctcca gcgcaaaatg aaggcggcgg gtatcgattc gaccatcacc gaaattatga
    12961 ccgacaacgg caaagtttac cgcgtcaaat caagcaacta taaaaacgca agggatgccg
    13021 aacgcgattt gaacaaattg cgcgtacacg gtatcgccgg tcaggtaacg aatgaatagc
    13081 ctccccattg ccgacctcct cgtctccgcc gtcatcgccg cctgcatcgt catttccacg
    13141 atgcgcggcg tgattacgga ggcaggctca atggcggcat gggtggtttc cttctttttc
    13201 gccaaactct ttgccgcacc cttcgccgac atcgcctttg catcgttcca accccgcctg
    13261 tttgcattgg ctctgtcgtt catttcccta ttcgtcattg cctgtctgat ccagaaaata
    13321 ctccgctcgc tgctgaccgg ggcagtttcg gcggtcggtt tgggctttgc caaccgcatt
    13381 ttgggcggcg tattcggtgc attgaaaggc attttgatta ttaccctgct ggtcatgctc
    13441 gcttcaaaaa ccgacctgcc cgataccgaa gaatggcggc aatcttacac actgccgttt
    13501 ttcgtatcgc tttccgaagc cgtgttgaac catagcggcg gcacggcgga aactccggaa
    13561 gacgattgat tgccatacgg atatttcaga cggcattctc ttttatgccg tctgaaatgt
    13621 tttttccttt cctcagccat atcac
//
LOCUS       DAWITQ010000037        13485 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.037, whole genome shotgun sequence.
ACCESSION   DAWITQ010000037 DAWITQ010000000
VERSION     DAWITQ010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13485)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13485)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13485
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.037"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(144..234)
                     /locus_tag="WIX18_000877"
     tRNA            complement(144..234)
                     /locus_tag="WIX18_000877"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(198..200),aa:Ser,seq:gga)
     gene            complement(273..359)
                     /locus_tag="WIX18_000878"
     tRNA            complement(273..359)
                     /locus_tag="WIX18_000878"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(323..325),aa:Leu,seq:cag)
     gene            complement(395..481)
                     /locus_tag="WIX18_000879"
     tRNA            complement(395..481)
                     /locus_tag="WIX18_000879"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(445..447),aa:Leu,seq:cag)
     gene            570..2945
                     /gene="rnr"
                     /locus_tag="WIX18_000880"
     CDS             570..2945
                     /gene="rnr"
                     /locus_tag="WIX18_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HEZ5238013.1"
                     /translation="MNKNIKSLNLREKDPFLSREKQRYEHPLPSREWIIELLERKGVP
                     SKIEALVRELSIKEEEYEFFERRLKAMARDGQVLINRRGAVCAADKLDLVKCRVEAHK
                     DGFGFAVPLTPAKDGDFVLYERQMRGIMHGDIVTVRPAGMDRRGRREGTVLDIVERAQ
                     SKVVGRFYMDRGVAILEPEDKRLNQSIVLEPDGVARFKPESGQVIVGEIEVYPEQNRP
                     AVAKIIEVLGDYADSGMEIEIAVRKHHLPHQFSEACAKAAKKIPDHVRKSDLKGRVDL
                     RDLPLVTIDGETARDFDDAVFAEKIGRNYRLVVAIADVSHYVRPDDAIDTDAQERSTS
                     VYFPRRVIPMLPENLSNGICSLNPNVERLCMVCDMVITYAGNIKEYRFYPAVMRSHAR
                     LTYNQVWKWLSDGIGHPFKAQIDTLYKLFKILQKKRFERGAVEFDSIETQMLFDDNGK
                     IEKIVPVVRNDAHKLIEECMLAANVCAADFLLKNKHTALFRNHLGPTPEKLAALREQL
                     GLLGLQLGGGDNPSPKDYAALAGQFKGRPDAELLQVMMLRSMQQAVYEPHCDGHFGLA
                     YEAYAHFTSPIRRYPDLTVHRAIKAVLNQQTYTPKKSWQALGVHTSFCERRADDASRD
                     VENWLKTYYMRDKVGEVFEGKISGMTSFGIFVTLDGIHIDGLVHISDLGEDYFNFRPE
                     IMAIEGERSGIRFNMGDRVAVRVARADLDDGKIDFVLIAEGSGRGRKVKSSASAKPAG
                     TAGKGKPKTAAEKKTARGGKVRGRGASAAAESGKKAKKPVPIKVKKRKGKS"
     gene            complement(3284..4747)
                     /gene="guaB"
                     /locus_tag="WIX18_000881"
     CDS             complement(3284..4747)
                     /gene="guaB"
                     /locus_tag="WIX18_000881"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003767939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEZ5238014.1"
                     /translation="MRIVEKAYTFDDVLLVPAHSTVLPRDVKLQTKLTREITLNLPLL
                     SAAMDTVTEARLAISMAQEGGIGIIHKNMPPEMQARAVSKVKRHESGVVKDPVTVAPT
                     TLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRFENRVDLPVSAIMTPRERLV
                     TVPEGTSIDEARELMHTHKVERVLVLNEKDELKGLITVKDILKTTEFPNANKDSEGRL
                     RVGAAVGTGGDTEERVKALVEAGVDVIVVDTAHGHSQGVIDRVKWVKETYPHIQVIGG
                     NIATAKAALDLVAAGADAVKVGIGPGSICTTRIVAGVGVPQLTAIHNVAEALKGTGVP
                     LIADGGIRFSGDIAKALAAGAYSVMLGGMFAGTEEAPGEIELYQGRSYKSYRGMGSLG
                     AMSQGSADRYFQDKTDSTDKYVPEGIEGRVPYKGPIVNIIHQLTGGLRSSMGYLGCAN
                     IAEMHEKAEFVEITSAGMSESHVHDVQITKEAPNYHR"
     gene            complement(4948..5028)
                     /locus_tag="WIX18_000882"
                     /pseudo
     CDS             complement(4948..5028)
                     /locus_tag="WIX18_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798803.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(5074..5535)
                     /locus_tag="WIX18_000883"
     CDS             complement(5074..5535)
                     /locus_tag="WIX18_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238015.1"
                     /translation="MNIIMDSTRKFGILWEENSECNGFIYGKIQIIIGENIYPKICPY
                     GYFTLNAVFNSLKSSFEEKYYAGGNNGLDFGEQLFDIDKYNSLELCNIFSIDTTYMSG
                     GGNCEIDCLVLEMGYSGEEERLFYSFDNGKNFKEIRYKKGTVESVIFQLNL"
     gene            complement(5626..8184)
                     /gene="glnD"
                     /locus_tag="WIX18_000884"
     CDS             complement(5626..8184)
                     /gene="glnD"
                     /locus_tag="WIX18_000884"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HEZ5238016.1"
                     /translation="MPANLSSALETFKRQRDAAEAHYLKANRVSVFFREYTAAVETLL
                     AALWVEHFQNSALCLMAVGGFGRGELYPCSDVDLAVVSPAPLSDGIQEQIARFVQTLW
                     DCKLMPSVKSGSVDELCESVRNDITGDTAFLEARFLFGNRQTVDKLAEKMNAQRNVAA
                     FVEAKLVEMEHRHAKSQGSGAVLEPNIKSCPGGLRDIHTLLWIAKAQGLATDLPDLLK
                     QRILTRAEAGMLSHGYRRLAHIRIHLHLNANRAEDRLLFDLQPQVAESMGYEGLNLRR
                     QSEELMRVFYRAIKTVKQLGGILTPMLQSRVSSTPLRVTLRIDDDYIQVNNQIAARHT
                     DIFFRRPEHIFKIVEIMQQRNDITALEPQTLRAWWGATRKINRSFYQNPENRRRFAGF
                     FRNGNGLTQTLRFLNLYGVLGRYLPAWEKIIGLLQHDLFHIYPVDDHILTVVRNVRRL
                     ALDMHSHELPYASALMQSFEKQDILYLAAFFHDIAKGRGGDHAIQGIADARQFAADHF
                     LTGEESDLLAWLVENHLLMSAVAQKEDIQDPDVLDAFCKRVQTHERLSALYLLTISDI
                     RGTNPKLWNAWRASLLESLFHAAGRYLTGNGGNPHTLFGRRRQEAADLLTRAAVPEKQ
                     QKKLWNALGSAYFARHQSREILWHAANLVHDFETPIVRSRILPQSDSFQVMVFMPNGP
                     RLFARLCRIFSRHGFDILAARAFITEHDYILDTFIVQIPSQHAPEDYPDIQSALEAEL
                     NSFIHGHTVAEISSHSRRISRRSRYMPIAPSITITPEEDYPDWYSVEITAVNRPFLLA
                     DMAEVFFAHNVSLRYAKISTLDERAEDSFTVFSLDLKNPKIQSSLKQTLLEQLS"
     gene            complement(8232..8552)
                     /locus_tag="WIX18_000885"
     CDS             complement(8232..8552)
                     /locus_tag="WIX18_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ5238017.1"
                     /translation="MMGNKLTPPAKLPDEQDLRAVLAYNMRLFRVNKGWSQEELARQC
                     GLDRTYVSAVERKRWNIALSNIEKMAAALGVAAYQLLLPPQERLKLMTNSADTRQMPS
                     ESGI"
     gene            complement(8877..9350)
                     /gene="bfr"
                     /locus_tag="WIX18_000886"
     CDS             complement(8877..9350)
                     /gene="bfr"
                     /locus_tag="WIX18_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HEZ5238018.1"
                     /translation="MKGDRLVIRELNKNLGLLLVTINQYFLHARILKNWGFEELGEHF
                     FKQSIVEMKAADDLIERILFLEGLPNLQELGKLLIGESTEEIIACDLTKEQEKHEALL
                     AAIATAEAQQDYVSRDLLEKQKDTNEEHIDWLETQQELIGKIGLPNYLQTAAQED"
     gene            complement(9378..9842)
                     /gene="bfr"
                     /locus_tag="WIX18_000887"
     CDS             complement(9378..9842)
                     /gene="bfr"
                     /locus_tag="WIX18_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HEZ5238019.1"
                     /translation="MQGNQAVLDYMNELLSGELAARDQYFIHSRLYSEWGYTKLFERL
                     NHEMEEETTHAEDFIRRILMLGGTPKMARAELNIGTDVVSCLKADLQTEYEVRDALKK
                     GIKLCEEAQDYVTRDLMVAQLKDTEEDHAHWLEQQLRLIELIGEGNYYQSQL"
     gene            complement(10305..11288)
                     /gene="lipA"
                     /locus_tag="WIX18_000888"
     CDS             complement(10305..11288)
                     /gene="lipA"
                     /locus_tag="WIX18_000888"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HEZ5238020.1"
                     /translation="MSEIKTDDPKRGIKLRGADKTARIPIKVVPLQEKLKKPEWIRAK
                     LPSRKFFEIKDILREQKMHTVCEEASCPNIGECFSKGTATFMIMGDICTRRCPFCDVG
                     HGRPNMLDPDEPKNLAESVKAMNLRYVVITSVDRDDLRDGGAQHFADCIKAIRETSPN
                     TKIEILVPDFRGRLDIALKILAETPPDVMNHNLETHPSLYRKARPGANYQHSLDLLKR
                     YKEMMPHIPTKSGIMVGLGETDEDVREIMRDMRAHNIEMITIGQYLQPSDGHLPVLRY
                     VTPEQFKIFEKEAYELGFSNAAIGAMVRSSYHADEQATEALRESHGGCGHH"
     gene            complement(11281..11904)
                     /gene="lipB"
                     /locus_tag="WIX18_000889"
     CDS             complement(11281..11904)
                     /gene="lipB"
                     /locus_tag="WIX18_000889"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HEZ5238021.1"
                     /translation="MKIIHKGLVEYLPTFEAMKTFNAGRNADTEDELWVVEHPPVFTQ
                     GLVGKPEHLLIRDDIPVVQIDRGGQITYHGPGQLVVYTMIDFKRRKTSVRNIVSALEN
                     SIIATLAEYGIEAAADPKRPGVYVGERKIASLGLRIKNGSVYHGLALNVNMDLSPFTH
                     INPCGYAGMEMTQIADFVQPCPTPDEVAAKLTAHLETQFTPKADNNE"
     gene            complement(11906..12181)
                     /locus_tag="WIX18_000890"
     CDS             complement(11906..12181)
                     /locus_tag="WIX18_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HEZ5238022.1"
                     /translation="MTEQENKTSLIEFPCTFPLKVMGAVHPEFEQAVLDTVRLHAPDT
                     QAHHITTRPSSKGNYTGATVQVKVENQEQLDNIYRALTSHELVKVVL"
     gene            12366..13436
                     /locus_tag="WIX18_000891"
     CDS             12366..13436
                     /locus_tag="WIX18_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEZ5238023.1"
                     /translation="MYRRKGWGIKPWMGAGAAFAALVWLIFALGDTLTPFAVAAVLAY
                     VLDPLVEWLQKKGLNRASASMSVMVFSLILLLALLLIIVPMLVGQFNNLASRLPQLIS
                     FMQNTLLPWLKNTIGGYMEIDQASIIAWLQAHTGELSNALKAWFPVLMRQGGNIVSSI
                     GNLLLLPLLLYYFLLDWQRWSCGIAKLVPRRFAGAYTRITGNLNEVLGEFLRGQLLVM
                     LIMGLVYGLGLVLVGLDSGFAIGMVAGILVFVPYLGAFTGLLLATVAALLQFGSWNGI
                     LSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVIFSLMAFGQLMGFVGMLAGLPLAA
                     VTLVLLREGVQKYFAGSFYRGR"
BASE COUNT         2941 a         3179 c         3816 g         3549 t
ORIGIN      
        1 ataccacaaa acataccata aaaaaacggt aacggatagt tgtaagcggt tgatgacgat
       61 tatagacaat aacgggtttt cccaatgaaa ttattgtttg aataataaaa aatcccaaac
      121 cgtaaaagtt tgggatttgt atttggcaga gaggaaggga ttcgaaccct cgatacgcta
      181 ttcacgtata cacgctttcc aggcgtgcga cttaaaccac tcatccacct ctctaatggc
      241 ggaaattatc ccaatcggga taatttatta tttggtgccc gggagaagac tcgaacttcc
      301 acacccgtga ggataccagc acctgaagct ggcgcgtcta ccaattccgc cacccgggca
      361 atctaaatat tgaaataaag caaagcattt gatttggtgc ccgggagaag actcgaactt
      421 ccacacccgt gaggatacta gcacctgaag ctagcgcgtc taccaattcc gccacccggg
      481 ctttgcttta tttgctgttt tgcggtacag tgtcctgccg caaagaagtc gctattatat
      541 agttcataaa gagaatgtca acagtccaaa tgaataaaaa tattaaatct ttaaatttac
      601 gggaaaaaga cccgttttta agtcgtgaaa aacagcgtta tgaacatcct ttgcccagtc
      661 gggaatggat aatcgagctg cttgaacgta aaggcgtacc atccaagatt gaagctttgg
      721 tacgcgaatt gtcgattaag gaagaagagt acgaattttt cgaacgtcgt ctgaaggcga
      781 tggcgcggga cggtcaggtt ttaatcaacc gtcggggcgc ggtttgcgcg gcggacaaat
      841 tggatttggt caaatgccgt gtcgaggcgc acaaagacgg cttcggtttc gccgtgccgc
      901 tcacgcccgc caaagacggt gattttgttt tgtacgaacg ccagatgcgc ggcattatgc
      961 acggcgatat tgtcactgtt cgtcctgccg gcatggaccg taggggccgc cgcgaaggga
     1021 cggttctgga tattgtcgaa cgcgcgcaaa gcaaagttgt cggccgtttc tatatggata
     1081 ggggcgtggc gattttggag ccggaagaca agcgtctgaa ccaaagcatc gtattggaac
     1141 cggacggcgt ggcgcgtttc aaacctgaat ccggtcaggt catcgtcggc gaaattgagg
     1201 tttatcctga gcaaaaccgg ccggcagtgg caaaaatcat cgaagttttg ggcgattatg
     1261 ccgacagcgg catggagatt gaaattgccg tgcgcaagca tcatttgccg caccaattca
     1321 gtgaagcgtg tgccaaagcc gcgaaaaaaa ttcccgacca tgtacgcaaa agcgatttga
     1381 aaggccgcgt cgatttgcgc gatttgcctt tggtaacgat agacggcgaa acggcgcgcg
     1441 attttgacga tgccgtgttt gccgaaaaaa tcggacgcaa ttaccgtctg gtcgtggcga
     1501 ttgccgatgt cagccattat gtccgccccg atgacgctat cgacacggac gctcaggaac
     1561 gcagcaccag tgtttacttc ccgcgccgcg tgattcccat gttgccggaa aacctgtcca
     1621 acggcatctg ctcgctcaat cctaatgtcg agcgtttgtg tatggtgtgc gatatggtca
     1681 tcacttacgc gggcaatatt aaagaatacc gcttctaccc cgccgtgatg cgctctcatg
     1741 cccgcctgac ctacaaccaa gtttggaaat ggctttcaga cggcatcggg catccgttca
     1801 aagcacaaat cgacacgctt tacaaactct tcaaaatcct tcagaaaaag cgtttcgaac
     1861 gcggggcggt ggagtttgac agcatcgaaa cccaaatgct tttcgacgac aacggtaaaa
     1921 ttgaaaaaat cgtccccgtt gtccgcaacg atgcccacaa gctgattgaa gaatgtatgt
     1981 tggcggcaaa cgtttgcgca gcggattttc tgttgaaaaa caagcatacc gcattgttcc
     2041 gcaaccattt ggggcccacg cccgaaaaac tcgccgcctt gcgcgagcag ctcggtctgt
     2101 tggggcttca acttggcggc ggcgacaacc cgtcgccgaa agactatgcc gcgcttgccg
     2161 gacagttcaa aggcaggccg gatgccgaat tgctgcaagt catgatgttg cgctccatgc
     2221 aacaggcggt ttacgaaccg cattgcgacg gacactttgg tcttgcctac gaagcatacg
     2281 cccacttcac ctcgcccatc cgccgctatc ccgacctgac cgtacaccgc gccatcaaag
     2341 ccgtgttgaa tcagcaaacc tacacgccaa aaaaaagctg gcaggctttg ggcgtgcata
     2401 cctcgttctg tgagcgccgt gccgacgacg ccagccgcga cgtggaaaac tggctgaaaa
     2461 cctattatat gcgcgataag gtcggcgaag tattcgaagg taaaatctcc ggcatgacca
     2521 gttttggtat ctttgtaaca ctggacggca tccacattga cggcttggtg catatcagcg
     2581 atttgggcga agactatttc aacttccgcc ccgaaatcat ggcaatcgaa ggcgaacgca
     2641 gcggcatccg tttcaacatg ggggacaggg ttgccgtccg ggtcgcccgt gccgatttgg
     2701 atgatggaaa aatcgatttt gtcctgattg ccgaggggag cggcaggggg cggaaagtta
     2761 aatcatccgc gtctgccaaa ccggcaggga cggcggggaa agggaaaccg aaaaccgccg
     2821 ccgagaaaaa aacagcccga ggcggcaaag taaggggaag gggcgcgtct gccgccgcag
     2881 aatcggggaa aaaggcaaag aaaccggttc cgattaaggt aaaaaaacgg aaaggcaaat
     2941 cataatgctg acggggtggc ttggggaggg cggggcatac tttcccgaag ccgccgcccg
     3001 attttttgat atggcggccg gcgcatcatt tcaggccaat cgaaacgccc gtattgaaag
     3061 attgcgttta tttccaccgc cgttttaaag gccggcggta ttcggcagac ggggcgcaaa
     3121 cggcgttcag acggcatttt cattctttcg gcgtgtccgt ccgaatggct ttgcccgtcc
     3181 gcgcaatcag cccgtgcggc ttgccttgaa cggacaaaaa atgccgtctg aaacccgaaa
     3241 atcaggtttc agacggcatt ttgccttgaa aaggctgttc aaatcagcgg tggtagttcg
     3301 gtgcttcttt agtgatttga acgtcgtgaa cgtgcgattc gctcatacct gcggaagtga
     3361 tttccacaaa ttcggctttt tcgtgcattt cggcaatatt ggcgcaaccc aagtaaccca
     3421 tactggaacg cagaccgccg gtcagctggt ggatgatgtt cacaatcggg cctttgtaag
     3481 gaacgcggcc ttcgatgcct tcggggacgt atttgtcggt gctgtcggtt ttgtcttgga
     3541 agtagcggtc ggcagaacct tggctcatcg cgcccaatga acccataccg cgataggatt
     3601 tgtacgagcg gccttgatag agttcgattt cgcccggcgc ttcttccgtg ccggcaaaca
     3661 taccgccgag catgacgctg tacgcgcctg cggcgagggc tttggcgatg tcgccggaga
     3721 agcggatgcc gccgtcggca atcaggggaa cgcctgtgcc tttgagggct tcggcaacgt
     3781 tgtggatggc ggtcagttgc ggcacgccca cgcctgccac gatacgggtg gtgcaaatcg
     3841 atcccgggcc gataccgact ttgacggcat ccgcaccggc ggcgaccaaa tccaatgcgg
     3901 ctttggcagt ggcgatgttg ccgccgatga cttggatgtg cggataggtt tctttcaccc
     3961 atttcacgcg gtcaatcacg ccttggctgt gcccgtgggc agtatcgacg acaatcacgt
     4021 ccacgccggc ttcgaccaag gctttgacgc gctcttcggt atcgccgccg gtgccgactg
     4081 ccgcaccgac gcgcagacgg ccttcggagt ctttgttggc gttgggaaac tcggtggttt
     4141 ttaaaatatc tttaacggta atcagacctt tgagttcgtc tttttcgttc agaaccaaaa
     4201 cgcgctcgac tttgtgcgtg tgcatcagtt cgcgcgcttc gtctatgctt gtgccttcgg
     4261 ggacggtaac caaacgttcg cgcggggtca taatggcgga aacgggcaaa tcgacgcggt
     4321 tttcaaaacg caggtcgcgg ttggttacga tgccgacgac tttgccgttt tcaacgacgg
     4381 gcaggccgga cattttgcgt ttgcgctgcg cacgcatttc caagacttcg cggatgagcg
     4441 tcgtcggtgc aacggttacg gggtctttga ccacgccgct ttcgtggcgt ttcactttgg
     4501 aaacggcgcg cgcctgcatt tcgggcggca tgtttttatg gatgatgccg atgccgcctt
     4561 cctgtgccat cgaaatggcg aggcgcgcct cggtaacagt gtccatcgca gcggaaagca
     4621 gggggaggtt gagtgtgatt tcgcgggtga gcttggtttg aagtttaacg tctcgcggca
     4681 gcacggtcga atgtgcggga accaacaaaa catcgtcgaa agtataggct ttttctacga
     4741 tacgcataat gctcggtctt tcagtttgtg caagatgcac ggcattatag cacgttaccg
     4801 gcggcttgac agtttatcag gtttaatttt ggtccccttt gaatagcccg gttttccttt
     4861 gccgaccact gttgctcccg ttctttcaat ttcaggaaaa gcttttttct aatttttggt
     4921 aagtggctca gttattgaag ccctatatcg ggcggtaact tccagcacaa aaaaacggag
     4981 tagttcttta tttatttttt cctttaattt tcagtatatt atcttaatat ttcgagggta
     5041 acatatctgc taatctagtt acagccccat atattataga ttcaattgaa aaataacaga
     5101 ttcaactgta cctttcttat acctgatttc tttaaagttt ttcccattgt caaaactata
     5161 aaaaagtctc tcttcctcac cagaatatcc catttctaat actaaacaat ctatttcaca
     5221 attaccccct ccactcatat atgtagtatc aatagaaaat atattgcata attccagaga
     5281 attatattta tctatatcaa atagttgctc tccaaaatct aaaccattgt ttccacctgc
     5341 ataatacttc tcttcaaagg atgacttcaa actattaaaa actgcattta gcgtaaaata
     5401 tccatatggg catatcttag gatatatatt ctctcctatt attatctgaa tttttccata
     5461 aataaaacca ttacattcag agttttcttc ccataaaatc ccaaattttc ttgttgagtc
     5521 cataataata ttcatataaa tccttatatt aataaattat ttacaatatc ccccgctttc
     5581 agacggcata cggcgtggcg gcggaatgcc gtctgaaggc gggcgttatg ataattgttc
     5641 cagcagcgtc tgcttcaatg aggactggat ttttgggttt ttcaggtcta ggctaaaaac
     5701 ggtaaaactg tcttcggcgc gttcatccag tgtggagatt ttggcatagc gcaggctgac
     5761 gttgtgggcg aaaaagactt ccgccatatc ggcgagcagg aaggggcggt tgacggcggt
     5821 gatttcgacg gagtaccaat cggggtagtc ttcttcgggg gtgatggtga tgcttggcgc
     5881 gatcggcata tagcggctgc ggcggctgat gcggcggcta tggctggaga tttcggcaac
     5941 ggtgtgtccg tggataaagc tgttgagttc ggcttcgagc gcgctttgaa tgtcggggta
     6001 gtcttcggga gcgtgctgcg aggggatttg cacgatgaag gtgtcgagga tgtagtcgtg
     6061 ttcggtgatg aaggcgcggg cggcgagaat gtcgaagccg tggcggctga agatgcggca
     6121 gaggcgggcg aacaggcgcg ggccgttggg cataaagacc atcacttgga agctgtcgct
     6181 ttggggcagg atgcggctgc ggacgatggg ggtttcaaaa tcgtgtacga ggttggcggc
     6241 gtgccacagg atttcgcggg actggtggcg ggcgaagtag gcggaaccga gcgcgttcca
     6301 tagttttttc tgctgttttt cggggacggc ggcgcgggtg agtaagtcgg cggcttcctg
     6361 ccggcggcgg ccgaagaggg tgtgcgggtt gccgccgttg cctgtaaggt agcgtccggc
     6421 ggcatggaag aggctttcca gcaggctggc gcgccatgcg ttccacagct tgggattggt
     6481 accgcgtatg tcggaaatgg tcagaaggta gagcgcgctg aggcgttcgt gggtttggac
     6541 gcgtttgcag aaagcatcga gtacgtcggg gtcttggatg tcttcttttt gggcgacggc
     6601 agacatcagc aggtggtttt cgaccagcca agcgagcagg tcgctttctt ctccggtcag
     6661 gaagtggtca gcggcaaatt ggcgcgcgtc tgcgatgcct tgtatggcat ggtcgccgcc
     6721 gcgtcctttg gcgatgtcat ggaaaaaggc ggcaaggtag aggatgtctt gtttttcaaa
     6781 ggactgcatc agtgcagagg cgtagggcag ctcgtggctg tgcatatcca aggcaaggcg
     6841 gcggacgttg cggacgacgg tgaggatgtg gtcgtccacg ggatagatgt ggaacaggtc
     6901 gtgttggagc aggccgatga ttttttccca cgcgggcagg tagcggccca acacgccgta
     6961 gaggttgaga aagcgcaggg tctgggtcag cccgttgccg ttgcggaaaa aaccggcgaa
     7021 gcggcggcgg ttttcgggat tttggtagaa gctgcggttg attttgcgcg tcgcgcccca
     7081 ccaggcgcgc agggtttgcg gttcgagcgc ggtaatgtcg ttgcgctgct gcatgatttc
     7141 gacgattttg aaaatgtgtt cgggccgtct gaaaaaaata tcggtgtgcc gcgcggcgat
     7201 ttggttgttg acttggatgt agtcgtcgtc aatccgcagg gtaacgcgca acggggtgga
     7261 ggaaacgcgg ctttgcagca taggcgtgag gatgccgccc agttgtttga cggttttaat
     7321 cgcgcggtaa aacacgcgca tcagttcttc gctttggcgg cggaggttca agccttcata
     7381 acccatgctt tcggcgactt gcggctgcaa atcgaacagc aggcggtctt cggcgcgatt
     7441 ggcgtttaaa tgcagatgga tgcggatgtg ggcgaggcgg cggtagccgt gcgaaagcat
     7501 accggcttcg gcacgcgtca aaatccgctg tttgagcagg tcgggcaggt cggtcgccaa
     7561 gccttgcgcc ttcgctatcc aaagcagggt gtggatgtcg cgcagaccgc ccggacagct
     7621 tttgatattc ggctccaata ctgcccccga accttgcgat ttggcgtggc ggtgttccat
     7681 ctccaccagt tttgcctcga caaacgccgc cacattgcgc tgcgcgttca ttttttccgc
     7741 cagtttatcc accgtttggc ggttgccaaa caaaaaccta gcctctaaaa acgctgtgtc
     7801 ccccgtaata tcattgcgca cgctttcaca tagttcatca acgctgccgc tttttacaga
     7861 cggcatcagt ttgcagtccc acagggtttg aacaaaccgg gcaatctgtt cctgaatgcc
     7921 gtctgaaagc ggggcagggg agacaaccgc caaatccaca tccgaacagg gatacagttc
     7981 gccgcgcccg aagccgccca ccgccatcag gcataacgcg ctgttttgaa aatgttctac
     8041 ccacaatgcc gccagtaagg tttcgactgc cgccgtatat tccctgaaaa ataccgacac
     8101 gcggttggct ttcaaataat gcgcttcggc ggcatcgcgc tgccgtttga aggtttccag
     8161 tgctgaagac aggtttgcag gcatttttat tctttcgatt ggcgggaaaa gggaggtgga
     8221 tggttcggcg gtcaaatacc gctttcagac ggcatttgtc gggtatcggc ggaattggtc
     8281 atcagcttca accgttcctg cggcggcagc agcaactgat acgccgccac gcccaaagcc
     8341 gccgccattt tttcgatatt cgacagggcg atgttccagc gtttgcgctc gactgccgac
     8401 acataagtcc tgtccaaacc gcattgccgc gccaattctt cttgcgacca acccttgttc
     8461 acgcggaaaa gccgcatatt gtatgccaat accgcccgca aatcctgttc gtcaggcagt
     8521 ttggcaggcg gggtcaattt gttgcccatc atttgcttcc agataaatgg ttaaagttaa
     8581 gcatttgctg ttacggattt tacttcacat aaaagccaaa aaaaaggggt ggcggcagcc
     8641 acacccaaac acacacacat caagaggaaa gaggtaaaat caagacagat tgggaaacag
     8701 caaacaagca atctagattt catatcggta ttatcaaaca aaaaccgtta tcgagtattg
     8761 attcaaatca atttagattt gattcgcaaa ccggcaaaga aaaacggcat acccgtttat
     8821 acggatatgc cgtctgatga tgcaggggac tgctatattt ggcagtggtt tgtgttttag
     8881 tcctcttgcg ccgctgtttg caggtagttc ggcaaaccaa ttttgccgat cagttcctgc
     8941 tgggtttcaa gccagtcgat gtgttcttcg ttggtgtctt tttgtttttc caacaaatca
     9001 cggctgacgt aatcctgttg cgcttctgct gtggcgatgg cggcaagcag ggcttcgtgt
     9061 ttttcctgtt ctttggtcaa atcgcaggcg atgatttctt cggtggactc gccaatcaga
     9121 agcttgccca gttcttgcag gttcggcaga ccttcgagga acagaatgcg ctcgatcaaa
     9181 tcgtcggcag ctttcatttc aacgatggac tgtttgaaga aatgttcgcc cagttcttca
     9241 aagccccagt ttttcaaaat acgggcgtga aggaaatatt ggttgatggt taccagcagc
     9301 aagcctaagt ttttgtttag ctcgcggata accagacggt cgcctttcat acggactcct
     9361 tttattccga atacggatta cagttggctt tggtagtagt tgccttcgcc aattaactcg
     9421 atcaggcgaa gctgctgttc cagccagtgg gcgtggtctt cttcggtatc tttcagttgg
     9481 gcaaccatca ggtcgcgcgt aacatagtct tgagcctctt cgcacagttt gatgcctttt
     9541 ttcaacgcat cacgtacttc atattcggtt tgcaggtcgg ctttgaggca ggaaaccacg
     9601 tccgtgccga tattcagttc ggcgcgtgcc attttcggcg tgccgcccag catcaggatg
     9661 cggcggatga agtcttcggc gtgtgtggtt tcttcttcca tctcgtggtt gagacgttca
     9721 aaaagtttgg tgtagcccca ttcggagtag aggcgggagt ggataaagta ttggtcgcgt
     9781 gccgccagct cgccagacag caattcgttc atgtaatcta aaactgcttg attgccttgc
     9841 ataatatttc tcttttctta atttgggttt cgtgtagtta aacagtggat gtagcactgt
     9901 tcggaatgcg tgcattgtat gcaaaagctg tcggcatgac aaattttcta tttaaaatac
     9961 aaacaattat caaaagaaat agggcgtatt ccccgatgcc ttccaaatca gtatgctgtt
    10021 ttttatcggt tttttgtgct gttaaaacta ataatccata ttatccataa agaacattta
    10081 cacttgttaa ccatagctaa aagcaaatac ggtacggttt tttatcaaaa tttataatga
    10141 atcgttctca ttaaccgaca gattcttttg agattatcgg attttgggaa taaattatgc
    10201 cgtctgaggg gctttcagac ggcatagaca attaaagctg attaaacaac gcggcagaca
    10261 gcagcgtagg aaattatttt ttacttcgga acggtatttt gggtttaatg atgcccgcaa
    10321 ccgccgtggc tttcgcgtaa ggcttcggta gcctgttcgt cggcgtggta gctggaacgt
    10381 accatcgcgc cgatggcggc attgctgaag cccagttcgt atgcttcttt ttcaaagatt
    10441 ttgaactgct cgggcgtaac gtagcgcagg acgggcaggt gtccgtctga aggctggagg
    10501 tactgtccga tggtaatcat ttcgatattg tgcgcccgca tatcgcgcat aatttcacgc
    10561 acgtcttcgt ctgtttcgcc caagccgacc atgatgccgg atttggtcgg gatgtgcggc
    10621 atcatttctt tataacgttt taataagtct aaagaatgtt gataattggc accgggacgg
    10681 gcttttctgt acaggctcgg atgggtttct aggttgtggt tcatcacgtc gggcggggtt
    10741 tcggcaagga ttttgagtgc gatgtccaag cgtcctcgga agtcggggac gaggatttcg
    10801 attttggtgt tcgggctggt ttcgcggatg gctttgatgc agtcggcgaa atgctgtgcg
    10861 ccgccgtcgc gcaggtcgtc gcggtcgacg gaggtgatga cgacgtaacg caggttcatg
    10921 gctttgacgg attcggcgag gtttttcggt tcgtcggggt cgagcatatt cgggcggccg
    10981 tgtcccacgt cgcagaacgg gcagcggcgg gtgcagatgt cgcccataat catgaaggtc
    11041 gccgtgcctt tgctgaagca ttcgccgatg ttggggcagg aggcttcctc gcaaacggtg
    11101 tgcatttttt gttcgcgcaa aatgtctttg atttcaaaga atttgcgcga tggaagtttg
    11161 gcgcgtatcc attcgggctt ttttaatttt tcctgaaggg ggacgacttt gatggggatg
    11221 cgggcggttt tgtccgcgcc tctgagtttg atgccgcgtt tggggtcgtc ggttttgatt
    11281 tcactcattg ttgtctgctt tcggtgtgaa ttgtgtttca aggtgtgcgg taagtttggc
    11341 ggcgacttcg tccggcgtgg ggcagggttg gacaaaatcc gcgatttgcg tcatttccat
    11401 accggcgtag ccgcaggggt tgatgtgggt aaacgggctt aaatccatat tgacgttgag
    11461 cgcaagcccg tgatagacgg agccgttttt gatacgcagc cccagtgagg cgattttgcg
    11521 ttctccgaca taaacgccgg ggcgtttggg gtctgccgcc gcttcgatgc cgtattctgc
    11581 caatgtggcg atgatgctgt tttcaagcgc ggaaacgatg ttgcggacgc tggttttgcg
    11641 ccgtttgaaa tcaatcatcg tataaacgac caattgcccg ggcccgtgat aggtaatctg
    11701 cccgccccgg tcgatttgga cgacgggaat gtcgtcgcga atcagcaggt gttcgggttt
    11761 tcccaccagt ccttgtgtga acacgggcgg gtgttcgacg acccacagtt cgtcttcggt
    11821 gtcagcattc cgtccggcat taaaggtttt catcgcttca aaagtcggca gatattcgac
    11881 caaacctttg tgtatgattt tcatctcaaa gtaccacttt gaccagttcg tgcgaagtca
    11941 gcgcgcggta gatgttgtcc aattgttctt ggttttcaac ctttacctga acggtggcgc
    12001 cggtatagtt gcctttgctg ctcggacgcg tggtgatgtg gtgcgcctgc gtgtcggggg
    12061 cgtggaggcg gacggtgtcc aataccgcct gctcgaactc gggatgaacc gcccccatta
    12121 cttttaatgg gaaggtgcag ggaaattcga tgagggatgt tttgttttct tgttcggtca
    12181 tgatgtgctg ccttgttgtg tacggtatgc cgtctgaagg cgggtttgcc tttcagacgg
    12241 catcggatgt gcgttatttt agcctaaacc gcgataacag gctatcggga aggcggaggc
    12301 ttttttgacg gcgcggcggt tctgctatac tggcgcgcaa tattattttt agaagggtgg
    12361 tttttatgta tcggaggaaa gggtggggca tcaagccgtg gatgggtgcc ggtgcggcgt
    12421 ttgccgcctt ggtttggctg attttcgcgc tcggcgatac tttgactccg tttgcggttg
    12481 cggcggtgct ggcgtatgtg ttggaccctt tggtcgaatg gttgcagaaa aagggtttga
    12541 accgtgcatc cgcttcgatg tctgtgatgg tgttttcctt gattttgttg ttggcattat
    12601 tgttgattat tgtccctatg ctggtcgggc agttcaataa tttggcatcg cgcctacccc
    12661 aattgatcag ttttatgcag aacacgctgc tgccgtggtt gaaaaataca atcggcggat
    12721 atatggaaat cgatcaggca tctattattg cgtggcttca ggcgcatacg ggcgagttga
    12781 gcaacgcgct taaggcgtgg tttcccgttt tgatgaggca gggcggcaat attgtcagca
    12841 gtatcggcaa cctactgctg ctgcccttgc tgctttatta tttcctgctg gattggcagc
    12901 ggtggtcgtg cggcatcgcc aaactggttc cgaggcgttt tgccggtgct tatacgcgca
    12961 ttacgggtaa tttgaacgag gtattgggcg aatttttgcg cgggcagctt ctggtgatgc
    13021 tgattatggg tttggtttac ggcttggggt tggtgctggt cgggctggat tcggggtttg
    13081 caatcggtat ggttgccggt attttggttt ttgttcccta tttgggcgcg tttacaggac
    13141 tgctgctggc aaccgtcgcc gccttgctcc agttcggttc gtggaacggc atcctatcgg
    13201 tttgggcggt ttttgccgta ggacagtttc tcgaaagttt tttcattacg ccgaaaatcg
    13261 tgggagaccg tatcgggctg tcgccgtttt gggttatctt ttccctgatg gcgttcggac
    13321 agctgatggg tttcgtcgga atgttggcag gattgccttt ggccgccgta accttggtct
    13381 tgcttcgcga gggcgtgcag aaatattttg ccggcagttt ttaccggggc aggtaggcgg
    13441 ttccgaaaca tatttgaagc gggatacaac cctgcccggg tttaa
//
LOCUS       DAWITQ010000038        13296 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.038, whole genome shotgun sequence.
ACCESSION   DAWITQ010000038 DAWITQ010000000
VERSION     DAWITQ010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13296)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13296)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13296
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.038"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..289)
                     /locus_tag="WIX18_000892"
     CDS             complement(<1..289)
                     /locus_tag="WIX18_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238024.1"
                     /translation="MTPWADAYADLRGKTKVMTTQMGASRDVSKSAKGWSVGIGLNVG
                     KQLTDSVGLEFDPYYRHKTIYKPREIVLDGDKTKMGRSKSNEYGFRVAATFY"
     gene            complement(348..580)
                     /locus_tag="WIX18_000893"
                     /pseudo
     CDS             complement(348..580)
                     /locus_tag="WIX18_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212266.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            516..743
                     /locus_tag="WIX18_000894"
     CDS             516..743
                     /locus_tag="WIX18_000894"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238025.1"
                     /translation="MGNTRIPIKSFFKQLVLFVFNIFLAYEILPDVQAESAAGCPVPD
                     CRGNGKTDVPCGFVRMNGGYCFYQSVSFSLE"
     gene            905..1960
                     /gene="aroG"
                     /locus_tag="WIX18_000895"
     CDS             905..1960
                     /gene="aroG"
                     /locus_tag="WIX18_000895"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HEZ5238026.1"
                     /translation="MTHHYPTDDIKIKEVKELLPPIAHLYELPISKEASGLVHRTRQE
                     ISDLVHGRDKRLLVIIGPCSIHDPKAALEYAERLLKLRKQYENELLIVMRVYFEKPRT
                     TVGWKGLINDPHLDGTFDINFGLRQARSLLLSLNNMGMPASTEFLDMITPQYYADLIS
                     WGAIGARTTESQVHRELASGLSCPVGFKNGTDGNLKIAIDAIGAASHSHHFLSVTKAG
                     HSAIVHTGGNPDCHVILRGGKEPNYDAGHVSEAAEQLRAAGVTDKLMIDCSHANSRKD
                     YTRQMEVAQDIAAQLEQDGSNIMGVMVESHLVEGRQDKPEVYGKSITDACIGWGATEE
                     LLALLAGANKKRMARAG"
     gene            2028..2516
                     /locus_tag="WIX18_000896"
     CDS             2028..2516
                     /locus_tag="WIX18_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEZ5238027.1"
                     /translation="MLKITLIAACAENLCIGAGNAMPWHIPEDFAFFKAYTLGKPVIM
                     GRKTWESLPVKPLPGRRNIVISRQADYCAAGAETAASLEAALALCAGAEEAVIMGGAQ
                     IYGQAMPLATDLRITEVDLSVEGDAFFPAIDRTHWKEAERTERRVSSKGTRYAFVHYL
                     RY"
     gene            complement(2866..3342)
                     /locus_tag="WIX18_000897"
     CDS             complement(2866..3342)
                     /locus_tag="WIX18_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HEZ5238028.1"
                     /translation="MPIEIERRFLIGNDNWRQYADEPLLLRQGYLSVEKERTVRVRIA
                     GKQAWLTLKGYISEISRSEFEYEIPLADAEKMMETMCPFKMEKWRYPVRWGGSLFEID
                     VFLGDNAPLVVAEIELPDENADFDRPDWLGREITADGMFTNAYLSRHPFSSWKNAV"
     gene            complement(3354..3782)
                     /locus_tag="WIX18_000898"
     CDS             complement(3354..3782)
                     /locus_tag="WIX18_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HEZ5238029.1"
                     /translation="MMFSWFKLFHLFFVISWFAGLFYLPRIFVNMAMIDVPRGNPEYV
                     RLSGMAVRLYRFMSPLGFGAVVFGAAIPFAAGWWGSGWVHVKLCLGLMLLAYQLYCGV
                     LLRRFQDYSNAFSHRWYRVFNEIPVLLMVAALYLVVFKPF"
     gene            3894..4139
                     /locus_tag="WIX18_000899"
     CDS             3894..4139
                     /locus_tag="WIX18_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238030.1"
                     /translation="MLKSIELNSHIRNRLAEYLKGRGMDFQTAMQEEKGNKEIAAIVH
                     SGLPTLVRKLYSEQKMQKFFWEKRDLIADYISRRMQG"
     gene            5090..7184
                     /locus_tag="WIX18_000900"
                     /pseudo
     CDS             5090..7184
                     /locus_tag="WIX18_000900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_180374912.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            7426..8892
                     /locus_tag="WIX18_000901"
     CDS             7426..8892
                     /locus_tag="WIX18_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ5238031.1"
                     /translation="MVIFYFCGKTFMPARNRWMLLLPLLASAAYAEETPREPDLRSRP
                     EFRLHEAEVKPIDREKVPGQVREKGKVLQIDGETLLKSPELLSRAMYSAVVSNNIAGI
                     RVILPIYLQQAQQDKMLALYAQGILAQADGRVKEAISHYRELIAAQPDAPAVRMRLAA
                     ALFEDRQNEAAADQFDRLKAENLPPQLMEQVELYRKALRERDAWKVNGGFSVTREHNI
                     NQAPKRQQYGKWTFPKQVDGTAVNYRLGAEKKWSLKNGWYTTAGGDVSGRVYPGNKKF
                     NDMTAGVSGGIGFADRRKDAGLAVFHERRTYGNDAYSYTNGARLYFNRWQTPKWQTLS
                     SAEWGRLKNTRRARSDNTHLQISNSLVFYRNARQYWMGGLDFYRERNPADRGDNFNRY
                     GLRFAWGQEWGGSGLSSLLRLGAAKRHYEKPGFFSGFKGERRRDKELNTSLSLWHRAL
                     HFKGITPRLTLSHRETRSNDVFNEYEKNRAFVEFNKTF"
     gene            complement(9093..10061)
                     /locus_tag="WIX18_000902"
     CDS             complement(9093..10061)
                     /locus_tag="WIX18_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238032.1"
                     /translation="MKLTLALPSLNLDEDEIRIPLCLPAFNKILQYGSLHRQSCTASA
                     FYARYLWCGRLAERAAQSLNMPSEAVALATPVWQKMGMHQANVLTAEYLNVGTDEAER
                     LCRDLSAFYGDIPWRFVPVLPELWLVSLPCAYRWGAKPVLDLGGLLGADDQPDGEDAL
                     EWLRVQTEIQMWLAAHPVNHNRKKRGLPELNGLWLWDGTNGGAQGGTLFADTVWSRFH
                     PDRRALPDNFRAYEETAAHLPDTHHILFMDDLRLTALTGDRERYAAILQQWEERWFAP
                     LYEAVRTGKIKRLDIATDGQHGGTLTFKPADRWKFWRGAKTFDGIW"
     gene            10139..11431
                     /locus_tag="WIX18_000903"
     CDS             10139..11431
                     /locus_tag="WIX18_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEZ5238033.1"
                     /translation="MAVFPLSAKHRKYALRALAVSIILVSAAYIASTERTERVRPQRV
                     EQNLPPLSWGGSGVQTAYWVQEAVQPGDSLADVLARSGMARDEIARITEKYGGEADLR
                     HLRADQSVHVLVGGDGGAREVQFFTDEDGERNLVALEKKGGIWRRSASEADMKVLPTL
                     RSVVVKTSARGSLARAEVPVEIRESLSGIFAGRFSLDGLKEGDAVRLMYDSLYFHGQQ
                     VAAGDILAAEVVKGGTRHQAFYYRSDKEGGGGGNYYDEDGKVLQEKGGFNIEPLVYTR
                     ISSPFGYRMHPILHTWRLHTGIDYAAPQGTPVRASADGVITFKGRKGGYGNAVMIRHA
                     NGVETLYAHLSAFSQAQGNVRGGEVIGFVGSTGRSTGPHLHYEARINGQPVNPVSVAL
                     PTPELTQADKAAFAAQKQKADALLAHLRGIPVTVSQSD"
     gene            complement(11934..12620)
                     /locus_tag="WIX18_000904"
     CDS             complement(11934..12620)
                     /locus_tag="WIX18_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HEZ5238034.1"
                     /translation="MYAFTDAQQQKALFRLVLFHILIIAASNYLVQFPFQIFGIHTTW
                     GAFSFPFIFLATDLTVRIFGSHLARRIIFWVMFPALLLSYVFSVLFHNGSWTGLGALS
                     EFNTFVGRIALASFAAYALGQILDIFVFNKLRRLKAWWIAPTASTVIGNALDTLVFFA
                     VAFYASSDGFMAANWQGIALVDYLFKLTVCGLFFLPAYGVILNLLTKKLTTLQTKQAQ
                     DRPAPSLQNP"
     gene            complement(12696..13169)
                     /gene="queF"
                     /locus_tag="WIX18_000905"
     CDS             complement(12696..13169)
                     /gene="queF"
                     /locus_tag="WIX18_000905"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HEZ5238035.1"
                     /translation="MSRNTEELQGISLLGNQKTQYPIGYAPEILEAFDNKHPDNDYFV
                     KFVCPEFTSLCPMTGQPDFATIYIRYIPHIKMVESKSLKLYLFSFRNHGDFHEDCVNI
                     IMKDLIALMDPKYIEVFGEFTPRGGIAIHPFANYGKAGTEFEALARKRLFEHDSQ"
     regulatory      complement(13173..13217)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00522"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="PreQ1 riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF00522"
BASE COUNT         3308 a         3218 c         3740 g         3030 t
ORIGIN      
        1 tatagaacgt tgcggctacg cggaagccgt actcgttgga tttggagcgg cccattttgg
       61 ttttgtcacc gtccaagaca atctcacggg gtttgtagat tgttttgtga cggtagtatg
      121 gatcaaactc gagaccgacg ctgtcggtca actgtttgcc tacattcaga ccgataccga
      181 cactccaacc tttggcgctt ttgctgacat cgcgggaagc acccatctgg gtcgtcatca
      241 ctttggtttt gccgcgcaaa tctgcatatg catccgccca aggggtcaag gatcatccgt
      301 cccccaaatc ttggcggatt tcgccatgga ctttcaaagc aaggttttca tgcttggtaa
      361 cggtgttttt ccttatcgcc gatgatggct ttgcccttgc cgttagactc gggaatatcg
      421 gctaccgtaa cggcggacac ggctgcaagt gagagtgcaa gcagggtttt ttcatgtttt
      481 tcttcctata atgaggatga ataaatggag aaagtgtggg aaatacccgc attccaatta
      541 aatctttttt caagcaatta gttctttttg ttttcaacat tttccttgcg tatgaaattt
      601 tgccggatgt gcaggcggaa tcggcagcgg ggtgtcctgt accggattgt cgtggaaacg
      661 ggaaaacgga tgttccgtgc ggttttgtcc gaatgaatgg cgggtattgt ttttatcaat
      721 ctgtttcttt ttctttggaa taaaattcct aaaatattaa aaatatgaaa tttaaaatct
      781 atgaaaaaag atatatcagt tattttgaaa taaaatagct ttgtagtaat atgttgcact
      841 tgtttgtgca aggtaaacga tgtaacctaa gccgcgtata aaaaaccatc aggaaagatg
      901 caagatgaca caccattacc ccacagacga tattaagatt aaagaagtta aagagttgtt
      961 gccgccgatt gcccatcttt acgagctgcc gatttccaaa gaggcttcgg gcttggttca
     1021 ccgcacccgt caggaaattt ccgatttggt tcacggcagg gacaagcggc tgttggttat
     1081 tatcgggccg tgttcgattc acgatccgaa agcggcgttg gaatatgcgg agcgtttgtt
     1141 gaaactccgc aagcagtatg aaaacgagct tttgattgtg atgcgcgttt atttcgagaa
     1201 gccgaggacg acggtgggtt ggaaaggttt gattaacgac ccgcatttgg acggtacgtt
     1261 cgatatcaat ttcggtttgc gtcaggcgcg cagcctgttg ttgtcgctga acaatatggg
     1321 tatgcctgcc tctaccgagt ttttggatat gattacgccg caatattatg cggacttgat
     1381 ttcttggggg gcaatcggtg cgcggacgac cgaaagccaa gttcaccgcg aattggcaag
     1441 cgggctgtcc tgccccgtcg gctttaaaaa cggtacggat ggcaatttga agattgccat
     1501 cgacgcaatc ggtgcggcga gccattcgca tcatttcttg tctgtaacca aggccggaca
     1561 ttccgccatt gtccataccg gcggcaatcc cgactgtcat gtcattttgc gcggcggaaa
     1621 agagccgaat tatgatgcgg gacacgtcag cgaggcggcg gaacaactgc gtgcggcagg
     1681 ggtaaccgat aagctgatga tagattgcag ccacgccaac agccgcaagg attacacccg
     1741 gcagatggaa gtggcacaag atattgctgc ccaattggaa caggacggga gcaatattat
     1801 gggcgtgatg gtggaaagcc atttggtcga aggcagacag gataagccgg aagtgtacgg
     1861 caaaagcatt accgatgcgt gtatcggttg gggcgcgact gaagaactgt tggcattgtt
     1921 ggcaggtgca aacaaaaaac gtatggcgcg cgccggttga gatttttgac acggaatgtc
     1981 ataaaatgcc gtctgaagcg ttcagacggc atttttgtgg aggaaatatg ctcaaaataa
     2041 ccctaattgc ggcgtgtgcg gaaaacctgt gcatcggggc gggcaatgct atgccttggc
     2101 acatccccga agatttcgca tttttcaaag cctatacctt gggcaaaccc gtcattatgg
     2161 ggcggaaaac gtgggaatcc ctgcccgtca aacccctgcc cggacggagg aacatcgtca
     2221 tcagccggca ggcggattat tgcgcggcag gcgcggaaac ggcggcaagt ttggaggcgg
     2281 cattggcatt gtgcgcaggc gcggaagaag ccgtcattat gggcggcgcg cagatatacg
     2341 gacaagcgat gccattggcg accgatttgc ggataaccga agtggatttg tctgtggaag
     2401 gagatgcatt tttccccgca atagaccgga cgcattggaa agaagcagag cggacggaac
     2461 gccgtgtcag cagcaaaggc acgcgctatg cttttgtgca ttatttgaga tattgaaata
     2521 taaactctct ataaaatccc ccgcaaatga tgggctgaaa tagaaaatat tgttattccc
     2581 ccgaagatgg gaatccggga ttttaaagtt agggtaattt atccgaaata acaacaatct
     2641 tccatcgtca ttcccgcaaa agcgggaatc cggaaacgaa aagctaaagc aatttatcgg
     2701 aaaaaaccga agtttaaaga accggattcc cgcctgcgcg ggaatgacga gattttaggt
     2761 tatggggatt tattgggaat aatggaacaa agaaagcaga aataaggata tagaggctgt
     2821 ctttggattt gcgatggttg tcggagaatg ccgtctgaag ccgtttcaga cggcattttt
     2881 ccagcttgag aacggatgcc tgctcaaata ggcattggta aacataccgt cggcagtgat
     2941 ttcccgtccc agccagtccg gacggtcaaa atcggcattc tcgtcgggca actcgatttc
     3001 cgcgacgacc aaaggcgcat tatcgccaag aaaaacatcg atttcaaaca ggctgccgcc
     3061 ccatctgacc ggataacgcc atttttccat tttaaacggg cacatcgttt ccatcatctt
     3121 ttccgcatcg gcaagcggga tttcgtattc aaactcactg cggctgattt ccgaaatata
     3181 gcctttcagc gtcagccacg cctgttttcc ggcaatgcgg acacggacgg tgcgttcttt
     3241 ttcaacagac agataaccct gcctcaacag cagcggttcg tcggcgtatt gccgccagtt
     3301 gtcgtttcca atcaaaaaac ggcgttcgat ttctatcggc ataagatgct ccgtcaaaac
     3361 ggtttgaaca cgaccagata cagcgcggca accatcagca gcacggggat ttcgttgaac
     3421 acgcggtacc agcggtgtga aaaagcattg ctgtaatcct gaaaacggcg cagcagcacg
     3481 ccgcaataca actggtaagc caagagcatc aagcccaaac acagtttgac gtgtacccag
     3541 ccgctgcccc accagccggc ggcaaacggt atcgccgcgc cgaacacgac cgcgccgaag
     3601 cccaacggcg acataaaacg gtacagccgc accgccatgc ccgacagacg cacatactcg
     3661 ggattgccgc gcggcacatc aatcatcgcc atattgacga aaatcctcgg caggtaaaac
     3721 agccctgcaa accacgaaat gacaaaaaac aagtgaaaca gcttgaacca agaaaacatc
     3781 atcgcccaca ccctgccgaa aagcggtatt gtacaggcaa accgcttggg aaacgtgata
     3841 aaatcaggcg gataaacaaa tcgaataaat ccttaccgca aaacggaggc aaaatgctca
     3901 aatccatcga actcaattcc cacatccgca accgccttgc agaatatctg aaaggcaggg
     3961 gtatggattt tcagacggca atgcaggaag aaaaaggcaa caaagaaatc gccgccatcg
     4021 tccacagcgg tttgcccact ctggtccgca aactgtattc cgaacaaaaa atgcagaagt
     4081 ttttttggga aaagcgggat ttgattgccg actacatcag ccgccggatg cagggatagg
     4141 tggctgaaat ctgttttcag gcaagtgaaa agacaatatg gcagattgaa attacgctta
     4201 tcgtcattcc cgcccgcgcg ggaatccgac ttgtttggtt tcggttattt ttcgtttcgt
     4261 aacttttgag ccgtcattcc cgcgcaggcg gtaatccggc ttgttcggtt tcggttcttt
     4321 ttctcgtttc gggtgatttc taaaccgtca ttcccgcgca ggcgggaatc taggtcttta
     4381 aacttcggtt ttttccgata aatttttgcc gcattaaaat tctagattcc cgctttcgcg
     4441 ggaatgacgg cggagggttt ttagttttcc cgaaaatgca catcatccaa aatcccgtta
     4501 ttcccacaaa acagaaaatc aaaaacagta acctgaaatc ccgtccttcc ctcccgtgcg
     4561 ggaatccgac ttatctggtt tcggttcttt ttctcgtttc aggtgatttc taaaccgtca
     4621 ttcccgtgca ggcgggaatc cagaccttta aaccccggac atccccgata aattcttgcg
     4681 gcattgaaat tctagattcc cgctttcacg ggaatgacgg cggagggttt ttagttttcc
     4741 cgataaatgc acatcatcca aaatcccgtt attcccacaa aacagaaaat caaaaacaac
     4801 aatctgaaat tccgtccttc ccgcccgtgc gggaatccga cttgtccggt ttcggttctt
     4861 tttctcgttt caggtgattt ctaaaccgtc attcccgcgc aggcgggaat ctaggtcttt
     4921 aaacttcagt tttttccgat aaattcttgc cgcattaaaa ttctagattt ccgcctgcgc
     4981 gggaatgacg gcggagaggt tttttgtttt tcctgatttt tcattgcgat gtagtgtgat
     5041 gtagtatata atcattataa ttttaacact tgacaaagga aaatttctca tgacactgaa
     5101 agcaagcaag caagcaagca agcaagcaag caagcaagca agcaagcaag caagcaagca
     5161 agcaagcaag caagcaagcg gtcgggttaa tctattaaca ttatctgttt tatcgctgtt
     5221 ttgcacgcca tatgtttgag gttcggatgc gtacgatccc gtcaaagaag ccgagattaa
     5281 aaacaaattt attttagaag cggcggaaga cagaaattcc cacgtttggc gcggcccgtg
     5341 cagtgtgtct tttgattgct tcggtgcttt cagttatcag cccggttcgg atactcgttc
     5401 tacaaatatt ggcgatgctg ccgatttttc attttcagac aagccggcaa acggcgtttc
     5461 ccattatttt tccagcggta aaaccgatcc aaattcatct gaagccttgt atgacgaaat
     5521 caatatcacg ggtaaaaact acaatagcgg catcctcgcc gtcgataata tgcccgttgt
     5581 taagaaatat gttacagaga attacggagc tgatttaaag caggcggtta aggatcaatt
     5641 aaaggattta tataaaacaa gacccgaaga ttggggaaaa aaataaaaaa atagttgagg
     5701 aagcgataat aaaacaatat ggaataccta gaaataaaat taataaattt agaaaagtta
     5761 ttgatccaat tatagaagaa gctgtactca ctcctcatag taatacaaca ccgaccaatc
     5821 tcgacaacat cttcaataaa aaattacacg tcaaaatcga aaacaaatcc cacgtcgctg
     5881 gacaggtgtt ggaactgacc aagatgacgc tgaaagattc cctttgggaa ccgcgccgcc
     5941 attccgacat ccatacgctg gaaacttccg ataatgcccg catccgcctg aacacgaaag
     6001 atgaaaaact gaccgtccat aaggattatg cgggcggcgc ggatttcctg ttcggctacg
     6061 acgtgcggga gtcggacgaa cccgccctga cctttgaaga caaagtcagc ggacaatccg
     6121 gcgtggtttt ggaacgccgg ccggaaaatc tgaaaacgct cgacgggcgc aaactgattg
     6181 cggcaaaaac ggcggattcc ggttcgtttg cgtttaaaca aaattaccgg cagggactgt
     6241 acgaattatt gctcaagcaa tgcgaaggcg gattttgctt gggcgtgcag cgtttggcta
     6301 tccccgaggc ggaagcggtt ttatatgccc aacaggctta tgcggcaaat actttgtttg
     6361 ggctgcgtgc cgccgacagg ggcgacgacg tgtatgccgc cgatccgtcc cgtcaaaata
     6421 tacggggtgg cgcggctgcg gacgggcggc gcaaaggcgt gcaaatcggc ggcgaggtgt
     6481 ttgtacggca aaatgaaggc agccggctgg caatcggcgt gatgggcggc agggtcggcc
     6541 agcacgcatc agttaacagc aaaggcggtg cggcaggcag tgatttgcat ggttatggcg
     6601 ggggtgttta tgctgcgtgg catcagttgc gcgataaaca aacgggtgcg tatttggacg
     6661 gctggttgca ataccaacgt ttcaaacacc gcatcaatga tgaaaaccgt gcggaacgct
     6721 acaaaaccaa aggttggacg gcttctgtcg aaggcggcta caacacgctt gtggcggaag
     6781 gcgttgtcgg aaaaggcaat aatgtgcggt tttacctgca accgcaggcg cagtttacct
     6841 acttgggcgt aaacggcggc tttaccgaca gcgaggggac gggggtcgga ctgctcggca
     6901 gcggtcagtg gcaaagccgc gccggcattc gggcaaaaaa ccgttttgct ttgcgtaatg
     6961 gtgtcaatct tcagcctttt gccgctttta atgttttgca caggtcaaaa tctttcggcg
     7021 tggaaatgga cggcgaaaaa cagacgctgg caggcaggac ggcgctcgaa gggcggttcg
     7081 gcattgaagc cggttggaaa ggtcatatgt ccgcacgcat cggatacggc aaaaggacgg
     7141 acggcgacaa agaagccgca ttgtcgctca aatggctgtt ttgatgcgtc gggaaatgtt
     7201 ttgacgtaca ggcggcacac cggcacggca ccgcacgccg ccccgcaaac caatccgaac
     7261 cctgctgccc cgaagggcgg ggcataatga tgaaaccggc ggaaaaccgc cggttttttg
     7321 ccgccgtttg aaacccgatt ctggcttcag acggcattgt cgcggcatcg ggcggcaggg
     7381 tttggaacag cggcataaaa aactgataca atccgccgat tgataatggt tattttttat
     7441 ttttgtggga agacatttat gcctgcacga aacagatgga tgctgctgct gcctttattg
     7501 gcaagtgcgg catatgccga agaaacaccg cgcgaaccgg atttgagaag ccgtcccgag
     7561 ttcaggcttc atgaagcgga ggtcaaacca atcgacaggg agaaggtacc ggggcaggtg
     7621 cgggaaaaag gaaaagtttt gcagattgac ggagaaaccc tgctgaaaag tcccgaattg
     7681 ttgtcccgcg cgatgtattc cgcagtggtc tcaaacaata ttgccggtat ccgcgttatt
     7741 ttgccgattt acctacaaca ggcgcagcag gataagatgt tggcacttta tgcacaaggg
     7801 attttggcgc aggcagacgg tagggtgaag gaggcgattt cccattaccg ggaattgatt
     7861 gccgcccaac ccgacgcgcc cgccgtccgt atgcgtttgg cggcagcatt gtttgaagac
     7921 aggcagaacg aggcggcggc agaccagttc gaccgcctga aggcggaaaa cctgccgccg
     7981 cagctgatgg agcaggtcga gctgtaccgc aaggcattgc gcgaacgcga tgcgtggaag
     8041 gtaaacggcg gcttcagcgt tacccgcgaa cacaatatca accaagcccc gaaacggcag
     8101 cagtacggca aatggacttt cccgaaacag gtggacggca cggcggtcaa ttaccggctc
     8161 ggcgcggaga aaaaatggtc gctgaaaaac ggctggtaca cgacggctgg cggcgacgtg
     8221 tccggcaggg tttatccggg gaataagaaa ttcaacgata tgacggcagg cgtttccggc
     8281 ggcatcggtt ttgccgaccg gcgcaaagat gccgggctgg cagtgttcca cgaacgccgc
     8341 acctacggca acgacgctta ttcttacacc aacggcgcac gcctttattt caaccgttgg
     8401 caaaccccga aatggcaaac gttgtcttcg gcggagtggg ggcgtttgaa gaatacgcgc
     8461 cgggcgcgtt ccgacaatac ccatttgcaa atttccaatt cgctggtgtt ttaccggaat
     8521 gcgcgccaat attggatggg cggtttggat ttttaccgcg agcgcaaccc cgccgaccgg
     8581 ggcgacaatt tcaaccgtta cggcctgcgc tttgcctggg ggcaggaatg gggcggcagc
     8641 ggcctgtctt cgctgttgcg cctcggcgcg gcgaaacggc attatgaaaa acccggcttt
     8701 ttcagcggtt ttaaagggga aaggcgcagg gataaagaat tgaacacatc cttgagcctt
     8761 tggcaccggg cattgcattt caaaggcatc acgccgcgcc tgacgttgtc gcaccgcgaa
     8821 acgcggagta acgatgtgtt caacgaatac gagaaaaatc gggcgtttgt cgagtttaat
     8881 aaaacgttct gattgctgtt ccttttcgga ggaaaccctg ccggcggcgg tatcacggcg
     8941 ggcatcggcg gctttcgggc ggtgctttgc gtgccgccgc gtgtgcggaa acgcattccg
     9001 gtttttccgg cataacggcg atgcgaggta aaatgccgtc tgaaacccga ttcgggcttc
     9061 agacggcatt gtcgcggttg cggcgggcgg gttcaccaga ttccgtcaaa ggttttcgcg
     9121 ccgcgccaaa atttccacct gtcggcgggt ttgaaggtca gcgtaccgcc gtgttgtccg
     9181 tccgtggcga tgtccagccg tttgattttg ccggtacgga cggcttcgta aagcggtgcg
     9241 aaccagcgtt cttcccactg ctgcaatatt gccgcatacc gctccctgtc ccctgtcagg
     9301 gcggtcaggc gcaaatcgtc cataaacagg atatggtgcg tgtcaggcag gtgtgccgcc
     9361 gtttcttcat aggcgcggaa gttgtcgggc aatgcgcggc ggtcggggtg gaaacggctc
     9421 caaaccgtat cggcgaaaag tgtgccgcct tgcgcgccgc cgtttgtgcc gtcccaaagc
     9481 cataagccgt tcaactcggg cagcccgcgt tttttgcggt tatggttgac ggggtgcgcc
     9541 gccagccaca tttggatttc ggtttggacg cgcagccatt ccaacgcatc ttctccgtcc
     9601 ggctgatcgt ccgcgcccaa caatccgccc aagtccaaaa cgggcttcgc gccccagcgg
     9661 tacgcgcaag gaagggaaac cagccataat tcgggcagga cgggaacgaa acgccatgga
     9721 atgtcgccgt aaaacgccga caggtcgcgg cagagccgtt ccgcttcatc cgtaccgacg
     9781 ttcagatatt ccgccgttag cacatttgcc tgatgcatcc ccatcttttg ccagacgggc
     9841 gtggcgagcg cgacggcttc agacggcata ttcaggcttt gcgccgcgcg ttccgccagt
     9901 ctgccgcacc acaaataacg cgcgtaaaat gccgaagccg tgcagctttg gcggtgcagc
     9961 gagccgtatt gcaggatttt gttgaaggcg ggcaggcata gaggtattcg gatttcgtct
    10021 tcatccaaat tgagcgaggg gagggcgagg gtgagtttca tcgtttgacg tttcagaaat
    10081 gcaggtcagg cgcaacatta tagaggattc ggcgcaaacg ccgtcaaaaa ggaacaatat
    10141 ggctgtcttc ccactttcgg caaaacatcg gaaatacgcg ctgcgtgcgc ttgccgtttc
    10201 gattattttg gtgtcggcgg catacattgc ttcgacagag aggacggagc gcgtcagacc
    10261 gcagcgcgtg gaacaaaatc tgccgccgct gtcttggggc ggcagcggcg ttcagacggc
    10321 atattgggtg caggaggcgg tgcagccggg cgactcgctg gcggacgtgc tggcgcgttc
    10381 gggtatggcg cgggacgaga ttgcccgaat cacggaaaaa tatggcggcg aagccgattt
    10441 gcggcatttg cgtgccgacc agtcggttca tgttttggtc ggcggcgacg gcggcgcgcg
    10501 cgaagtgcag ttttttaccg acgaagacgg cgagcgcaat ctggtcgctt tggaaaagaa
    10561 aggcggcata tggcggcggt cggcttctga ggcggatatg aaggttttgc cgacgctgcg
    10621 ttcggtcgtg gtcaaaacgt cggcgcgcgg ttcgctggcg cgggcggaag tgcccgtcga
    10681 aatccgcgaa tccttaagcg ggattttcgc cggccgcttc agccttgacg gtttgaagga
    10741 aggcgatgcc gtgcgcctga tgtacgacag cctgtatttc cacgggcagc aggtggcggc
    10801 gggcgatatt ttggcggctg aagtcgttaa gggcggcaca aggcatcagg cgttctatta
    10861 ccgttcggac aaggaaggcg gagggggcgg caattattat gatgaagacg gcaaggtgtt
    10921 gcaggaaaaa ggcggcttca acatcgagcc gctggtctat acgcgcattt cttcgccgtt
    10981 cggctaccgt atgcacccca tcctgcacac atggcggctg cacacgggca tcgattatgc
    11041 cgcaccgcag ggaacgccgg tcagggcttc cgccgacggc gtgattacct ttaaaggccg
    11101 gaagggcgga tacggcaacg cggtgatgat acgccacgcc aacggtgtgg aaacgctgta
    11161 cgcgcacttg agcgcgtttt cgcaggcaca aggcaatgtg cgcggcggcg aggtcatcgg
    11221 ttttgtcggt tcgacagggc gttcgaccgg gccgcacctg cattacgagg cacgcatcaa
    11281 cgggcagccc gtcaatcctg tttcggtcgc attgccgaca cccgaattga cgcaggcgga
    11341 caaggcggcg tttgccgcgc agaaacagaa ggcggacgcg ctgcttgcgc acttgcgcgg
    11401 cataccggtt accgtgtcgc aatcggattg aagtttgaac cggcgacgaa aacaatgccg
    11461 tctgaaaatc tgcaaacagg ttttcagacg gcatttatag tggattaaca aaaaccagta
    11521 cgtcgttgcc tcgccttagc tcaaagagaa cgattctcta agatgctgaa gcaccaagtg
    11581 aatcggttcc gtactatttg tactgtctgc ggcttcgttg ccttgtcctg atttttgtta
    11641 atccaccata cagtcgatta aaataaaact aagccaagga agcactgccg tcattcccgt
    11701 accgtcggga atccggacac cacggtacgg aaacccatcc gccgtcattc ccgcgaaagc
    11761 gggaatctag aaatacaatg cggcaggagt ttatcggaaa tgactgaaac ccaacgcacc
    11821 ggattcccgc tttcgcggga atgacgaagt gggcgggaat ccggatttat ccgttccgac
    11881 agtgtttgca aataaaagaa aacccaaccg tcccgatttc cggcagggct gttttacgga
    11941 ttttgcagcg agggcgcggg gcggtcttgc gcctgtttgg tttgcagggt cgtcagtttt
    12001 ttcgtcagca gattcagaat cacgccgtag gcgggcagga aaaacagacc gcagacggtg
    12061 agtttgaaca ggtaatcgac caaggcgatg ccctgccagt ttgccgccat aaatccatcg
    12121 ctgctggcgt aaaaggcaac ggcgaaaaat accagcgtat ccaaagcgtt gccgatgacg
    12181 gttgatgcgg tcggggcaat ccaccacgct ttcagacggc gtaatttgtt gaacacaaaa
    12241 atatcaagga tttgtccgag cgcgtaggcg gcaaagctgg ccagcgcgat gcgtccgaca
    12301 aaggtgttga attcggacag tgcgcccaag cccgtccaac tgccgttgtg gaacaaaacg
    12361 gaaaagacat aggaaagcaa aagggcgggg aacatgaccc aaaagataat ccgccgtgcc
    12421 aagtgcgaac cgaaaatgcg gacggtcagg tcggtggcaa ggaagatgaa gggaaaggaa
    12481 aacgcgcccc aagtggtgtg gatgccgaaa atttggaagg ggaactgcac cagatagttg
    12541 ctggcggcga tgatgaggat atgaaaaagc accagccgga agagtgcctt ctgttgctgt
    12601 gcgtcggtaa atgcgtacat aaaaaaacct ttcggaaagg cgttcagacg gcataccgta
    12661 tcgaaagaat gccgtctgaa agtgggaagg acggattatt ggctgtcgtg ttcgaacaag
    12721 cgtttacgcg ccaatgcttc aaactcggtg cctgctttgc cgtagttggc aaacggatga
    12781 atggcgatgc cgccgcgcgg tgtgaactcg ccgaatactt cgatgtattt cggatccatc
    12841 agggcaatga ggtctttcat gatgatgttg acacagtctt catgaaaatc gccgtggttg
    12901 cggaagctga agaggtagag tttcagggat ttgctttcca ccattttgat gtgcggaata
    12961 tagcggatgt agatggtggc gaagtcgggc tgcccggtca tggggcagag gctggtgaac
    13021 tctgggcaga cgaatttgac gaaatagtcg ttgtcgggat gtttgttgtc gaatgcttcg
    13081 agaatttcag gcgcgtagcc gatcggatat tgggtttttt gattacccaa aagcgagatg
    13141 ccttgcagct cttcggtatt gcgggacata gggtttcctt agttttttag tgtgggaggt
    13201 tttcgaacca cggggcggcg attgtaatat aagcggcggt atctgtgtag ttttcttcag
    13261 acggcatggt ttggacggcg gcgttttccg tgtcat
//
LOCUS       DAWITQ010000039        13224 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.039, whole genome shotgun sequence.
ACCESSION   DAWITQ010000039 DAWITQ010000000
VERSION     DAWITQ010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13224)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13224)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13224
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.039"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(42..809)
                     /locus_tag="WIX18_000906"
     CDS             complement(42..809)
                     /locus_tag="WIX18_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEZ5238036.1"
                     /translation="MSSNKASFFTRLRRLCRLAVWLFKTGKNLRGIDGGCPESRNRAV
                     IELGRGVLAALDIGLEVGRPAPEHPNGVLVAANHVSWLDIFAMSAVYPSSFIAKQEIK
                     SWPVLGKMGQNAGTVFINRNSRRDIEPINRAVCETLQRGQNVSFFPEARTSSGLGLLP
                     FKAALFQSAIDAGAKVLAVALRYYDETGKRTARPSYADVGLPTCLWRIVSMKKLTIKV
                     DFVCVADAAESEDRYALKDKIEESIRAVVADDADIAV"
     gene            complement(897..1724)
                     /gene="mutM"
                     /locus_tag="WIX18_000907"
     CDS             complement(897..1724)
                     /gene="mutM"
                     /locus_tag="WIX18_000907"
                     /EC_number="3.2.2.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase"
                     /protein_id="HEZ5238037.1"
                     /translation="MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEI
                     LSGRQVLSCGRRAKYLLIRFQTGVLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVF
                     SDGTVMRYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAV
                     KLALMDNAVVVGVGNIYANESLFRAGISPHRPANRLKKKECALLVETVKAVLRRAIET
                     GGSTLRDFVDSDGKSGYFQQEYTVYGRHNQPCPQCGGLVVKETLGQRGTFYCPNCQK"
     gene            complement(1776..2441)
                     /locus_tag="WIX18_000908"
     CDS             complement(1776..2441)
                     /locus_tag="WIX18_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEZ5238038.1"
                     /translation="MDAWFEDTAMGRYVAKLEQDFFGRYLDSYRFSGMCAVQVGGPWL
                     SLSEDVVCVPRDMSMSAENMALADVSADMLLFPHTLEGGVPSQILSEAHRILKPCGRL
                     MLTGFNPYSLWGFSRWFDGERLPEKRFCLPLPELKRLLADAGFDIELGKFMVYLPPVS
                     SLGQIRFWQFMEKAGDRWWPQCAAVYGLVLVKRAAGVTPLPAWDGYLGGKALAAGAAR
                     IAD"
     gene            2619..4595
                     /locus_tag="WIX18_000909"
     CDS             2619..4595
                     /locus_tag="WIX18_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEZ5238039.1"
                     /translation="MSKLKTIALTASGLSVCPGFLYAQNTSSHQIGLAIMRLNSSILD
                     LPPTKQYFQSGSLWSELRQGFRMGEVNPELVRRHESKFIASHSYFNRVINRSRPYMYH
                     IANEVKKRNMPAEAALLPFIESAFVTKAKSHVGASGLWQFMPATGRHYGLEKTPVYDG
                     RHDIYAATDAALNYLQYLYGLFGDWPLAFAAYNWGEGNVGRAINRARAQGLEPTYENL
                     RMPNETRNYVPKLLAVRNIIATPQSFGMNISDIDNKPYFQAVEPDRPLDNEAIVRLAG
                     ITQSELLALNPAFNVPAFIPKSKRKLLLPVASVQTFQSNYLNAAPDSLFSWEVYTPAA
                     KTSLSDISTATGMSIADIKRLNNLNGNLVNAGRSILVAKNGKTLQTASESVVSIDIDN
                     TPDTYRSNMPAGTVNVGIARIRPAAAQTADITVAPLPQKTVRTEPDPLVRIAEPALAT
                     AAAQPQTEKQTAMPSETQTATLAQIIPQNDMQAADELMQLVARNNLRRQAEETISAVI
                     GTPDTVAEHNISSSPQHTVAADGKRRARLETRVAKAADGEAEISPLHASIHRVVEGDT
                     LFNIAKRYNVSVADLIVANNIKGNTIQKGQVLRLAQAAPAQTRIEKVSYTARKGDTFK
                     SIAARFNIHIDDIRRLNPNLNTINPGQRVKLIGS"
     gene            4663..5355
                     /locus_tag="WIX18_000910"
     CDS             4663..5355
                     /locus_tag="WIX18_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HEZ5238040.1"
                     /translation="MKLIKYLQYQGIGSRKQCQWLIAGGYVFINGTCMDDTDADIDSS
                     SVETLDIDGEAVTVVPEPYFYIMLNKPEDYETSHKPKHYRSVFSLFPDNMRNIDMQAV
                     GRLDADTTGVLLITNDGKLNHNLTSPSRKIPKLYEVTLKHPAGETLCETLKNGVLLHD
                     ENETVYAADAVLESPSALLLTITEGKYHQVKRMVAAAGNRVQHLHRRRFAHLETENLK
                     PGEWKFIDCPKF"
     gene            5884..6327
                     /locus_tag="WIX18_000911"
     CDS             5884..6327
                     /locus_tag="WIX18_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEZ5238041.1"
                     /translation="MTVAGATVGFGATWRFPYLVGENGGGAYVFLFCIAMLVIGIPMI
                     LVENVIGRRKGVNALDAFGGPMNGKPIAKIWKLVGWMGLLGAFGIMAYYMALGGWVIS
                     YIVNIIGGNLNISSPIDGVVTKGFFAEHIETALGKLRFIRCFLSP"
     gene            6387..7196
                     /locus_tag="WIX18_000912"
     CDS             6387..7196
                     /locus_tag="WIX18_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEZ5238042.1"
                     /translation="MPLLFLFLIAMVVRNVTLPGAMEGVAFYLKPDFSKITAELFVFV
                     LGQVFFALSLGFGVMITLSSYLDKNENLVQTAVITAITNTIIAILAGFMIFPSLFSFG
                     VAPDSGPTLVFQSLPIVFSHMWAGSVFAVIFFSLLLIAALTTSLTIYEVLITTIQEKT
                     KIRRTAAITIVLAAIFIFGNIPSILSYGPWKDVSVFGKNIFDAFDYISGNILFMLTAL
                     GSALFAGFVMKDEAKDELLYKGNHTTVNIWFAYVKYLVPLVILLIFVSNLF"
     gene            7440..8096
                     /locus_tag="WIX18_000913"
     CDS             7440..8096
                     /locus_tag="WIX18_000913"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HEZ5238043.1"
                     /translation="MNRQKVIAIDGPGASGKGTVAARVAAALGYDYLDTGALYRLTAL
                     YAQKQGVGWHDEENVSELAKKLPAVFSGSRILLGGEDVSDGIRTEAIGMGASAVAQLP
                     KVRAALLQRQRDFLTEKGLVADGRDTGSVVFPQAELKIFLTAESKIRAERRAKQIGIP
                     CEGLAFERILSDIEARDEADRNRKVAPLKQQPDALLLDTSRLTIEETVKKVLDWYRKV
                     "
     gene            8252..9937
                     /gene="rpsA"
                     /locus_tag="WIX18_000914"
     CDS             8252..9937
                     /gene="rpsA"
                     /locus_tag="WIX18_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HEZ5238044.1"
                     /translation="MSMENFAQLLEESFTLQEMNPGEVITAEVVAIDQNFVTVNAGLK
                     SESLIDVAEFKNAQGEIEVKVGDFVTVTIESVENGFGETKLSREKAKRAADWIALEEA
                     MENGDILSGIINGKVKGGLTVMISSIRAFLPGSLVDVRPVKDTSHFEGKEIEFKVIKL
                     DKKRNNVVVSRRAVLEATLGEERKALLENLQEGSVIKGIVKNITDYGAFVDLGGIDGL
                     LHITDLAWRRVKHPSEVLEVGQEVEAKVLKFDQEKQRVSLGMKQLGEDPWSGLTRRYP
                     QGTRLFGKVSNLTDYGAFVEIEQGIEGLVHVSEMDWTNKNVHPSKVVQLGDEVEVMIL
                     EIDEGRRRISLGMKQCQANPWEEFAANHNKGDKISGAVKSITDFGVFVGLPGGIDGLV
                     HLSDLSWTESGEEAVRKYKKGEEVEAVVLAIDVEKERISLGIKQLEGDPFGNFISVND
                     KGSLVKGSVKSVDAKGAVIALSDEVEGYLPASEFAADRVEDLTTKLKEGDEVEAVIVT
                     VDRKNRSIKLSVKAKDAKESREALNSVNAAANANAGTTSLGDLLKAKLSGEQE"
     gene            9948..10262
                     /locus_tag="WIX18_000915"
     CDS             9948..10262
                     /locus_tag="WIX18_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HEZ5238045.1"
                     /translation="MTKSELMVRLAEVFAAKNGTHLLAKDVEYSVKVLVDTMTRSLAR
                     GQRIEIRGFGSFDLNHRPARIGRNPKTGERVEVPEKHVPHFKPGKELRERVDLALKEN
                     AN"
     gene            complement(10613..11020)
                     /locus_tag="WIX18_000916"
     CDS             complement(10613..11020)
                     /locus_tag="WIX18_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEZ5238046.1"
                     /translation="MTYTTAKAAEKIGISAHTLRFYDKEGLLPNIGRDEYGNRCFTDN
                     DLQWLGLLQCLKNTGMSLKDIKRFAECTVIGDDTIEERLSLFENQIENVKCQIAELKR
                     YLDLLEYKLAFYQKAKALGSVKAVNLPQIPETA"
     gene            11168..12277
                     /locus_tag="WIX18_000917"
     CDS             11168..12277
                     /locus_tag="WIX18_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000842106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase/class
                     III alcohol dehydrogenase"
                     /protein_id="HEZ5238047.1"
                     /translation="MKSRAAVAFAPNQPLQIVEIDVEMPRKGEVLIRNTHTGVCHTDA
                     FTLSGSDPEGVFPVVLGHEGAGVVVAVGEGVSSVKPGDHVIPLYTAECGECEFCCSGK
                     TNLCVSVRDTQGKGLMPDGTTRFSYQGQPIYHYMGCSTFSEYSVVAEVSLAKINPEAN
                     HEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGAIGLAVVQGARQAKAGRIIAID
                     TNPAKFELAKQFGATDCLNPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRQALES
                     AHRGWGQSIIIGVAGAGQEISTRPFQLVTGRVWKGTAFGGVKGRSELPKMVEDSMKGD
                     IELEPFVTHTMTLDQINEAFDLMHEGKSIRAVIHY"
     gene            12286..13113
                     /gene="fghA"
                     /locus_tag="WIX18_000918"
     CDS             12286..13113
                     /gene="fghA"
                     /locus_tag="WIX18_000918"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011961786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HEZ5238048.1"
                     /translation="MKLIEQHQIFGGLQQVWAHYAQTLQCEMKFAVYLPNNPENRPLG
                     VIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDAAYDLGQGAGF
                     YLNATEQPWVTNYQMYDYILNELPSLIEEKFPTNGKRSIMGHSMGGHGALVLALRNRE
                     RYQSVSAFSPILSPSLVPWGEKAFSAYLGKNREKWQQYDADSLIRQGCKVQGMRIDQG
                     LEDEFLPTQLRTQDFIETCRAANQPADVRFHKGYDHSYYFIAGFIGEHIAYHAAFLK"
BASE COUNT         3465 a         3670 c         3052 g         3037 t
ORIGIN      
        1 ccacaaaagc gaatcatact gccacattcc gacaaccggt ttcagacagc gatatccgca
       61 tcgtcggcga caacggcacg gatgctttct tcgattttat cttttaaagc ataacggtct
      121 tcgctttccg ccgcatccgc cacgcaaacg aaatcgactt ttatcgtcaa ttttttcata
      181 gacacgatgc gccacaggca ggtcggcaaa ccgacatcgg catatgaggg acgagccgtc
      241 ctttttcccg tttcgtcata ataacgcagc gcgaccgcca aaacctttgc ccccgcatcg
      301 atggcggatt ggaacagcgc ggctttgaac ggcaaaagcc ccaatccgga ggaagtccgc
      361 gcttcgggga aaaaactgac gttttgaccg cgttgcaagg tttcgcagac ggcgcggtta
      421 atcggttcga tgtcgcgccg cgaattgcgg ttgatgaaca ccgttcccgc gttctgcccc
      481 atcttgccca ataccggcca gcttttgatt tcctgcttgg cgataaagct gctcggataa
      541 accgcgctca tcgcgaaaat atccagccag gacacgtggt tggcggcaac caagacaccg
      601 ttcggatgtt cgggtgcggg tctgcccacc tccaatccga tatccaaagc cgccaaaacc
      661 cccctgccca actcgattac cgcccgattg cgcgactcgg ggcaaccgcc gtcaataccg
      721 cgcaggtttt tcccggtttt gaacagccag accgccaaac ggcacaagcg gcgcagacgt
      781 gtaaaaaatg aagctttatt tgaagacatg agcaattctt tcccgataat cggtgtttgt
      841 tgttgaaacg ttcggacggc ataccgataa aatgccgtct gaaaccgttt tcagtcctat
      901 ttctgacagt tcgggcagta aaacgtgccg cgctgcccca aagtttcttt cacaaccaaa
      961 ccgccgcact gggggcacgg ctgattgtgc cgcccgtaca ccgtatattc ctgttggaag
     1021 tagccgcttt tgccgtcgct gtccacaaaa tccctcaagg tactgccgcc cgtttcaatg
     1081 gcgcgccgca acaccgcttt gacggtttca accaaaagcg cacactcttt ctttttcaga
     1141 cggttggcag gacggtgggg cgaaatgccc gctctgaaca ggctctcatt ggcataaata
     1201 ttgcccacac cgaccacgac cgcattgtcc atcagggcaa gtttgaccgc gcgcttctgc
     1261 gccttcagcc tcacatacag ataatccgtg caaaatgcct ccgacaaagg ctccggcccc
     1321 agtttttcca acagcggatg atgttcttcg attccctcat accaaagtat cgcgccgaac
     1381 tttctcggat cgcggtaacg catgaccgtg ccgtctgaaa acacaatatc gacgtgatcg
     1441 tgtctgtccg gcctgccgat acgtccgtcc gacggcgtaa aaatccgcaa gctgcccgac
     1501 atccccaagt gaatcagcag cacgcccgtt tgaaagcgga taagcaggta tttcgccctc
     1561 ctgccgcagg acaacacctg ccggccggac aaaatctccc ccaaatcggg attaatctgc
     1621 cagcgcagct tcaattggcg caataccacg gcttccaccg ttttcccttc aatatgcggc
     1681 gcgatgccgc gcaacgtcgt ttccacttcc ggcaattcag gcataacccc tcccgacatt
     1741 tcttctgaca gatgccgtct gaaagacggc tgtccctaat ccgcaatcct tgccgcaccc
     1801 gccgcaaggg ctttgccgcc caaatacccg tcccacgcgg gcaggggcgt tacgcccgcc
     1861 gcccttttga ccaaaaccag accgtacact gcggcacatt gcggccacca acggtcgccc
     1921 gccttttcca taaactgcca aaagcgtatt tgcccgagcg acgaaacggg cggcagatac
     1981 accataaatt tcccaagttc aatatcgaag ccggcatcgg caagcagcct tttcaactcg
     2041 ggcagcggca gacaaaaccg tttttccggc aggcgttcgc cgtcaaacca acggctgaat
     2101 ccccagagcg aatacggatt gaaacccgtc agcatcaaac gtccgcacgg tttcaatatc
     2161 cggtgcgctt ccgacaggat ttgcgaagga acaccgcctt caagcgtatg cggaaaaagc
     2221 agcatatccg cagaaacatc cgccaaagcc atattctccg ccgacatcga catatctcgc
     2281 ggcacacaga caacatcttc agacaggctc agccacggac cgcccacctg aaccgcacac
     2341 attcccgaaa aacggtatga atctagatac cgcccgaaga agtcctgttc caattttgca
     2401 acataccgcc ccatcgccgt atcttcaaac catgcatcca tattgcgtcc gtttcaaaca
     2461 gattgcctgc cgatattcta ttccaaacag aatttctgtc aaaaaacaca tcggccgccc
     2521 acttccgaat ccgcataaag ttcctgtaaa acttgacgct ttttcagtca aacagtacca
     2581 tcggacgata aaatatgttt attccgccga tataaatcat gtccaaactc aaaaccatcg
     2641 ccctgaccgc gtcaggtctg tccgtttgtc cgggtttcct atacgcccaa aacacctcat
     2701 cacaccaaat cggtttggcg attatgcgct taaactcttc aatactcgac ctgcccccga
     2761 caaaacaata tttccaatcc ggcagcctgt ggagcgagct gcgccaaggc ttccggatgg
     2821 gcgaagtcaa tcccgaactg gtacgccgcc acgaaagcaa attcatcgca agccacagct
     2881 atttcaacag ggtcatcaac cggagtagac cctatatgta ccatatcgcc aacgaagtca
     2941 aaaaacgcaa tatgcccgcc gaagccgccc tgcttccctt catcgaaagc gcgttcgtca
     3001 ccaaagccaa atcacacgtc ggcgcatcgg gcctgtggca gttcatgccc gctaccggca
     3061 ggcattacgg cctggaaaaa acaccggttt acgacggcag gcacgacatt tacgccgcca
     3121 ccgatgccgc actcaactat ctgcaatacc tctatggact gttcggcgac tggccgctcg
     3181 cctttgccgc ctacaactgg ggtgaaggca acgtcggacg cgccatcaac cgcgcccgcg
     3241 cccaagggct cgaaccgacc tacgaaaacc tgcgtatgcc caacgaaacg cgcaactatg
     3301 tccccaagct gctcgccgtg cgcaacatta ttgccactcc ccaatctttc ggtatgaata
     3361 tcagcgacat agacaacaaa ccctattttc aggcagtcga accggatcgt ccgctcgaca
     3421 acgaagccat cgtccggctt gccggcatca cgcaaagcga gctgctcgcc ctaaaccccg
     3481 cattcaacgt ccccgcgttt atccccaaaa gcaaacgcaa actgctgctt cctgtcgcat
     3541 ccgtccaaac cttccaaagc aactacctca acgccgcacc cgacagcctg ttttcatggg
     3601 aagtctatac gcctgccgcc aaaaccagcc tgtccgacat ctcgacggca accggcatga
     3661 gcattgccga catcaaacgc ctcaacaacc tgaacggcaa ccttgtcaac gcaggacgca
     3721 gcatccttgt cgccaagaac ggcaaaaccc ttcagacggc atcggaatcc gtcgtttcca
     3781 tcgacatcga caatacgccc gacacctacc gttccaatat gccggcaggc acggtgaacg
     3841 tcggcattgc ccgaatccga cccgccgccg cacagacagc ggacattacc gtcgcacctt
     3901 tgccgcagaa aaccgtccgt acggaacccg atccccttgt ccgtattgcc gaacctgccc
     3961 ttgcgacagc cgcagcgcaa cctcaaaccg aaaaacagac cgccatgccg tctgaaaccc
     4021 aaaccgcaac actcgcgcag atcatccccc aaaacgacat gcaggcggca gacgaactca
     4081 tgcagcttgt tgcccgaaac aacctgcgcc gacaggctga agaaaccatc tccgccgtca
     4141 tcggcacgcc tgacacagtt gccgaacaca acatttcctc atctccgcaa cataccgttg
     4201 ccgccgacgg caaacgccgg gcacgtttgg aaacgcgcgt agccaaagct gccgacggcg
     4261 aagccgaaat ctccccgctc catgccagca tccaccgcgt tgtagaaggc gacaccctgt
     4321 tcaacattgc caaacgctac aacgtcagcg tagccgacct gattgtcgcc aacaacatca
     4381 aaggcaacac catccaaaaa ggacaggtac tccgcctggc gcaggcagcc cctgcccaaa
     4441 cccgtattga aaaagtatcc tacaccgcgc gcaaaggcga caccttcaaa agtatcgccg
     4501 cgcgcttcaa tatccatatc gacgacatcc gccggctcaa tcccaacctg aacaccatca
     4561 atccgggaca gagggtcaaa ctgattggaa gctgattcgg atacggcaca tgacaggact
     4621 ttctcagtcc tgtctttttc atcccacatt tcccatacca tcatgaaact tatcaaatac
     4681 ctgcaatatc aaggcatagg aagccgcaag cagtgccaat ggctgattgc cggcggttat
     4741 gttttcatca acggaacctg catggacgac accgatgcag acatcgattc ctcatccgtc
     4801 gaaacgttgg atattgacgg ggaagcagta accgtcgttc ccgaacccta tttctacatc
     4861 atgctcaaca agcctgaaga ttacgaaact tcgcacaaac ccaagcacta ccgcagcgta
     4921 ttcagcctgt tccccgacaa tatgcggaac atcgatatgc aggcggtcgg caggctggat
     4981 gcagatacga ccggcgtatt gctgattacc aacgacggca aactgaacca caacctgact
     5041 tcgccgagca gaaaaattcc caagctatac gaagttacac tcaagcaccc tgccggcgaa
     5101 acgctttgcg aaaccctgaa aaacggtgtc ctgctccacg acgaaaacga aacggtttac
     5161 gccgccgatg ccgtattgga aagcccgtcc gcattgctcc tgaccattac cgagggaaaa
     5221 taccaccaag tcaaacgtat ggtcgccgcc gcaggcaacc gcgtgcaaca ccttcatcgc
     5281 cggcgattcg cacatttgga aacagaaaac ctgaaacccg gcgaatggaa atttatcgat
     5341 tgtccgaaat tctaaaataa catccaagaa ttccatttat attcatccac atactcatta
     5401 aatatatggt ttaacccaat ttaacgcaaa aaatcaattt acgatataat ccatttgtct
     5461 gagtaacgcc tgttcaagca ggcttatgag taagacgttt tccccgtaat gtgttttgcc
     5521 atctatactt ctccccttgt atagatggtt ttttatttca aattccctct ctttcatcat
     5581 tattaaaatg ctatcattaa tgtgattaac aaaatttcat ttccatacac cgatgtagaa
     5641 gaataacaaa ttaatctatt tataaactcc gattcttcct catcgggtta tactcatcag
     5701 aaatactcac tgaaatatat gccttttaca tggaaaatca ctagacagtt gaaaaacaat
     5761 cagtcaattc ctgttaaaaa acgcgtgtag aatttccgct ttatctcaat cggacacggt
     5821 ttcaatatgt cttccccttc aaataccaat cgtcaaacct gatccagccg attaacctat
     5881 atcctgactg ttgccggcgc gactgtcggc ttcggcgcga cgtggcgttt cccgtatttg
     5941 gtcggtgaaa acggcggcgg cgcgtatgtg tttttattct gtatcgccat gctcgttatc
     6001 ggcatcccga tgattttggt ggaaaacgtc atcggacggc gcaaaggcgt gaacgcgctg
     6061 gatgcgttcg gcggtccgat gaacggcaaa cccattgcta aaatttggaa actggtcggc
     6121 tggatggggc tgctcggcgc gttcggcatc atggcttatt acatggcact cggcggctgg
     6181 gtaatcagct atatcgttaa tattattgga ggaaatttga atatttccag ccccatcgac
     6241 ggtgtggtta caaaaggctt ctttgccgaa cacattgaaa cagcccttgg gaaattgcgt
     6301 tttatacgct gctttttgtc gccgtgaacc aatggatttt ggtcaaaggc gttatcggcg
     6361 gcattgaaaa agcggcaaaa tagctgatgc cgctgctgtt tttgttccta atcgcgatgg
     6421 tcgtccgcaa cgttaccctt ccgggcgcaa tggaaggggt tgctttctat ctgaaacctg
     6481 atttcagcaa gattaccgcc gaactgttcg tcttcgtttt ggggcaggta ttttttgccc
     6541 tgagcctggg tttcggcgtg atgattacct tgtccagcta tttggataaa aacgaaaatc
     6601 tggttcagac ggcagttatc acggcaatta ccaataccat catcgccata cttgcgggct
     6661 ttatgatttt cccgtcgctc ttcagcttcg gcgttgcccc cgattccggc ccgactttgg
     6721 tattccaaag tttgccgatt gtgttctcgc atatgtgggc aggatctgtg ttcgccgtca
     6781 ttttcttctc gctgctcctg attgccgcgt tgacaacttc gctgaccatt tatgaagtgt
     6841 tgattacgac cattcaggaa aaaaccaaaa tccgccgtac cgccgcgatt acgattgtat
     6901 tggctgccat cttcattttc ggcaacatcc cgtccattct gagctatggt ccgtggaaag
     6961 acgtttccgt gttcggcaaa aatattttcg atgccttcga ctacatcagc ggcaacatct
     7021 tgtttatgct gaccgcgctc ggttccgcgc tgtttgccgg ttttgtgatg aaggacgaag
     7081 cgaaggacga attgctttat aaaggcaacc atacgacggt caatatttgg tttgcttatg
     7141 tgaaatatct tgtgccgctg gtgattctgc tgattttcgt cagcaacctg ttctaatctg
     7201 cagcaatcga tgccgtctga aggtcatacc tctttcagac agcattgcct tgatgcccgc
     7261 cacaataccc gcaacgccgg aatccgaacc ggcttgccgg cttctgtcgg atgttttcgg
     7321 gcaggcggcg ttccgtctgc ttagacaatc gtcctttaaa acaggtagaa tccgccccaa
     7381 cgggaaacac atccttcaga cggcaaaacc cataccccaa accatcagga atccccctta
     7441 tgaacagaca aaaagtcatc gccatcgacg gcccgggcgc atcgggcaaa ggcacggttg
     7501 ccgcccgcgt tgccgccgca ttgggatacg attatctcga taccggcgca ctctaccgcc
     7561 tgaccgccct atatgcacaa aaacaaggcg tgggatggca cgatgaagaa aacgtttccg
     7621 aactggcaaa aaaactgccc gccgtatttt caggcagccg catcctgctc ggcggcgaag
     7681 acgtttcaga cggcatccgg acagaagcca tcggcatggg cgcatccgca gtcgcacagt
     7741 tgcctaaagt ccgcgccgcc ctgctgcaac gccaacgcga ttttctgacc gaaaaaggac
     7801 tggtcgccga cggacgggac accggatcgg tcgtcttccc ccaagccgaa cttaaaatct
     7861 tcctgacggc agaatccaaa atccgtgccg aacgccgcgc caaacaaatc ggcatcccct
     7921 gcgaaggttt ggcattcgag cgcatcctgt ccgacatcga agccagagac gaggcagacc
     7981 gaaaccgcaa ggttgccccc ctgaaacaac aacccgatgc cctgcttttg gatacgagcc
     8041 gcctgactat agaagaaact gtaaaaaaag tgcttgattg gtatcgtaaa gtttaaattt
     8101 tcaggtataa tcgcccgcat tatgtttcag acggcataaa aatcccccat atgccgtctg
     8161 aaaccttatt tacccgtctg ccctgccaag gacggcagac acccaccaac ccaccccgca
     8221 ccccttggcg gtgtaccgaa aagagttata tatgtctatg gaaaattttg ctcagctgtt
     8281 ggaagaaagc tttaccctgc aagaaatgaa cccgggtgag gtgattaccg ctgaagtagt
     8341 ggcaatcgac caaaacttcg ttaccgtaaa cgcaggtctg aaatcagaat ccctgattga
     8401 tgtagctgaa ttcaaaaacg ctcaaggcga aattgaagtt aaagtcggcg acttcgttac
     8461 cgttaccatc gaatccgtcg aaaacggctt cggcgaaacc aaactgtccc gcgaaaaagc
     8521 caaacgcgct gccgattgga ttgccctgga agaagccatg gaaaacggcg acatcctgtc
     8581 cggcatcatc aacggaaaag tcaaaggcgg cctgaccgtt atgattagca gcatccgcgc
     8641 attcctgccg ggttctttgg tcgacgtacg tcctgtaaaa gacacttctc acttcgaagg
     8701 caaagagatc gaattcaaag tgatcaaact ggacaaaaaa cgcaacaacg tcgttgtttc
     8761 ccgccgcgcc gttctggaag ccactttggg tgaagaacgc aaagccctgc tggaaaacct
     8821 gcaagaaggc tccgtcatca aaggcatcgt taaaaacatt accgattacg gtgcattcgt
     8881 tgacttgggc ggcatcgacg gtctgttgca catcaccgat ttggcatggc ggcgcgtgaa
     8941 acacccgagt gaagtcttgg aagtcggtca ggaagttgaa gccaaagtat tgaaattcga
     9001 ccaagaaaaa caacgcgttt ccttgggtat gaaacaactg ggcgaagatc cttggagcgg
     9061 tctgacccgc cgttatcctc aaggcacccg cctgttcggc aaagtatcca acctgaccga
     9121 ctacggcgca ttcgtcgaaa tcgaacaagg catcgaaggt ttggtacacg tctccgaaat
     9181 ggactggacc aacaaaaacg tacacccgag caaagtcgta caactgggcg acgaagtcga
     9241 agtcatgatt ttggaaatcg acgaaggccg ccgccgtatc tctttgggta tgaaacaatg
     9301 ccaagccaat ccttgggaag aatttgccgc caaccacaac aaaggcgaca aaatctccgg
     9361 cgcggttaaa tccattaccg atttcggcgt attcgtcggc ctgcccggcg gcatcgacgg
     9421 tttggttcac ctgtccgacc tgtcctggac cgaatccggc gaagaagccg tacgcaaata
     9481 caaaaaaggc gaagaagtcg aagccgtcgt attggcaatc gacgtggaaa aagaacgcat
     9541 ctccttgggt atcaaacaac tggaaggcga tccgttcggc aacttcatca gcgtgaacga
     9601 caaaggttct ttggttaaag gttccgtgaa atctgttgac gccaaaggtg ctgttatcgc
     9661 cctgtctgac gaagtagaag gctacctgcc tgcttccgaa tttgcagccg accgcgttga
     9721 agatttgacc accaaactga aagaaggcga cgaagttgaa gccgtcatcg ttaccgttga
     9781 ccgcaaaaac cgcagcatca aactttccgt taaagccaaa gatgccaaag aaagccgcga
     9841 agcactgaac tccgtcaatg ccgccgccaa tgcgaatgcc ggcaccacca gcttgggcga
     9901 cctgctgaaa gccaaactct ccggcgaaca agaataaggt tgcagacatg acaaagtctg
     9961 agttaatggt tcgtttggca gaagtgtttg ccgccaaaaa cggcacgcat cttctggcaa
    10021 aagacgtaga gtacagcgta aaagtcttgg ttgacaccat gactagatcg cttgcccgag
    10081 gtcaacgcat cgaaatccgc ggtttcggca gcttcgattt gaaccatcgt cctgcccgca
    10141 tcggtcgcaa tcccaaaacc ggcgagcgtg tggaagtacc tgaaaaacat gtaccccact
    10201 tcaagcccgg taaagaattg cgcgagcggg tcgacttggc tttaaaagaa aatgccaatt
    10261 aaaccttagc atcaaaacgc cgctgttacg cggcgttttt tctgtggttt aacttcatcc
    10321 gctgcttcaa taccttgagc caagcaagca acggattaga gcgtggattt ttttatagtg
    10381 gattaacaaa aaccagtacg gcgttgcctc gccttagctc aaagagaaca attctctaag
    10441 gtgctgaagc accaagtgaa tcggttccgt actatttaca ctgtctgcgg cttcgtcgcc
    10501 ttgtcctgat ttttgttaat ccactatatc attgcttaca atccgctttt taaacaacaa
    10561 atttttgatt tctattacga acaggacaaa aatcctgctt attgcactaa aactaagccg
    10621 tttcaggaat ttgcggcaaa tttacggctt ttaccgaacc taatgctttc gctttttggt
    10681 aaaacgccaa tttgtattca agcaaatcta aatagcgttt taattcggca atttgacact
    10741 tcacattttc tatttgattt tcaaacaagg aaaggcgttc ttcaatggta tcgtcgccaa
    10801 tgacggtaca ttccgcaaag cgtttgatgt cttttaagct cattcccgta tttttcaagc
    10861 attgcaataa gcccaaccat tgcaaatcgt tatcggtaaa acagcggtta ccgtattcat
    10921 cacgtccgat attaggcaac aagccttctt tgtcgtaaaa acgtagggtg tgggcggaga
    10981 tgcctatttt ttcggcggct ttggcagtgg tataagtcat tttccctcct tctaaacaaa
    11041 aacagtaaaa aacacttgcc ttagagttaa ctctaaagtg taaactgttg ctatgttgct
    11101 caggtaaggc aactttgtca atgaattaag aggaaagaca atggaaatga aacaaaccga
    11161 ttcaaccatc aaatctcgtg cggcggtggc attcgcccct aaccaaccct tacaaattgt
    11221 ggaaatcgac gtagaaatgc cgcgtaaagg cgaggtgtta atccgcaata cccacactgg
    11281 cgtgtgccat actgatgcgt ttacgttatc aggaagcgat cctgaaggcg tattccctgt
    11341 ggtgcttgga cacgaaggtg cgggtgtggt cgttgctgtg ggcgaaggtg tgtcaagcgt
    11401 aaaaccgggt gatcacgtga ttccgcttta caccgccgaa tgtggcgaat gtgagttttg
    11461 ttgttcaggt aaaaccaact tgtgcgtctc agtgcgtgat acacaaggta aaggcttaat
    11521 gccggacggc acgacgcgtt tttcttatca aggtcagcca atctatcact atatgggctg
    11581 ttcgactttc agtgaatact ccgttgttgc cgaagtttca ctggcgaaaa tcaaccctga
    11641 agccaaccat gaacaagtat gtttgctcgg ctgcggcgtt accacaggta ttggtgcggt
    11701 acataatacg gcaaaagtgc aagaaggcga ctctgttgcc gtgtttggct taggcgcgat
    11761 tggtttggcg gtggtgcaag gtgcgcgtca agccaaagcc ggccgtatta tcgccattga
    11821 taccaatccc gcaaaattcg agttggcaaa acagtttggt gcaaccgatt gtttgaaccc
    11881 gaacgattac gataaaccga tcaaagatgt gttgttagac atcaacaaat ggggcatcga
    11941 ccacaccttt gaatgtatcg gcaatgtaaa tgtaatgcgt caggcattag aaagcgcaca
    12001 ccgtggttgg ggacaatcca ttatcatcgg cgtagcgggt gctggccaag aaatttccac
    12061 tcgtccgttc cagttggtaa ccggccgtgt ttggaaaggc actgcatttg gcggcgtgaa
    12121 aggccgctcc gagcttccga aaatggtgga agattcaatg aaaggcgaca tcgagttaga
    12181 accgtttgtg acccacacaa tgacgctcga tcaaatcaat gaagcctttg atttaatgca
    12241 tgaaggtaaa tcgatccgcg ctgttattca ttactaaggt acgcgatgaa actgattgag
    12301 caacatcaaa tttttggcgg tttgcagcaa gtttgggcgc attatgccca aacgctgcag
    12361 tgcgaaatga aatttgccgt ctatttgcca aataatccgg agaatcgacc gcttggtgtg
    12421 atttattggc tttccggctt gacttgtacg gaacaaaatt tcattaccaa atcaggtttt
    12481 cagcgttatg cggcagaaca tcaagtgatt gtggttgccc ccgataccag ccctcgcgga
    12541 gagcaagtgc cgaacgatgc ggcttacgat ttagggcagg gtgcgggctt ttatctgaat
    12601 gcgaccgagc agccttgggt gacgaattat caaatgtatg attatatttt gaatgagttg
    12661 cctagtctga ttgaggaaaa atttcctacc aacggcaaac gttccattat gggacattca
    12721 atgggcggac atggcgcatt ggtattggca ctgcgaaacc gggaacgtta tcaaagtgtt
    12781 tctgcctttt cgcctatttt atcgccaagc ctcgtgcctt ggggagaaaa agccttttct
    12841 gcctatttgg gaaagaatcg cgaaaaatgg cagcaatatg atgccgactc gctcatccga
    12901 caaggctgta aggtgcaagg tatgcgcatt gatcagggct tggaagatga gtttttgccg
    12961 acacaattgc gtacccaaga ttttatcgaa acctgtcgtg cggcaaacca accggccgat
    13021 gtgcgcttcc acaaaggcta tgatcacagc tattacttca tcgccggttt tattggcgag
    13081 catattgcct atcacgcggc atttttgaag taagccaaag agcgttcagt gttcaaagca
    13141 gttttgggat agccggcacg agggcggtaa gaagtgccgg cataaacgta tgccgtctga
    13201 gccggaagaa gccgactcta cgga
//
LOCUS       DAWITQ010000040        13097 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.040, whole genome shotgun sequence.
ACCESSION   DAWITQ010000040 DAWITQ010000000
VERSION     DAWITQ010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13097)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13097)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13097
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.040"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(308..1204)
                     /gene="argB"
                     /locus_tag="WIX18_000919"
     CDS             complement(308..1204)
                     /gene="argB"
                     /locus_tag="WIX18_000919"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HEZ5238049.1"
                     /translation="MESENIISAADKARILAEALPYIRRFSGSVAVIKYGGNAMTEPA
                     LKEGFARDVVLLKLVGIHPVIVHGGGPQINAMLEKVGKKGEFVQGMRVTDKEAMDIVE
                     MVLGGHVNKEIVSMINTYGGHAVGVSGRDDHFIKAKKLLIDTPEQNGVDIGQVGTVES
                     IDTGLVKGLIERGCIPVVAPVGVGEKGEAFNINADLVAGKLAEELNAEKLLMMTNIAG
                     VMDKTGNLLTKLTPKRIDELIADGTLYGGMLPKIASAVEAAVNGVKATHIIDGRLPNA
                     LLLEIFTDAGIGSMILGGGEDA"
     gene            1374..2504
                     /locus_tag="WIX18_000920"
     CDS             1374..2504
                     /locus_tag="WIX18_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase family protein"
                     /protein_id="HEZ5238050.1"
                     /translation="MIKISTRFDAGSVVVKDLTDPSNIRLALRPDNASDFAQWFYFRL
                     QGAAYQNCIMHFENAAEAAYPKGWEGYQACASYDRRNWFRVPTSYENGVLTVNHTPLS
                     NSVYYAYFEPYSEEQHLNLLGDAQGSGLCRIDDLGSTVQGRDINLLTIGNQVESDLKI
                     WITARQHPGETMAEWFVEGLLGRLLDPQDPTARTLLDRATFYIVPNMNPDGSALGNLR
                     TNAAGANLNREWENPTLEKSPEVFFVREKMLETGVDLFLDIHGDEGLPFIFVAGTEGV
                     PNYNPRISALETQFKTALLNASPDFQDEYGYEKDAPGQANMTLATNWVGNRFNCLAYT
                     LEMPFKDNANLPDDDFGWNGQRSLRLGEAALSAILNIIGDLR"
     gene            2575..3426
                     /locus_tag="WIX18_000921"
     CDS             2575..3426
                     /locus_tag="WIX18_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEZ5238051.1"
                     /translation="MITHPQFDPVLISIGPLAVRWYALSYILGFILFTFLGRRRIAQG
                     LSVFTKESLDDFLTWGILGVILGGRLGYVLFYKFSDYLAHPLDIFKVWEGGMSFHGGF
                     LGVVIAIWLFGRKHGIGFLKLMDTVAPLVPLGLASGRIGNFINGELWGRVTDINAFWA
                     MGFPQARYEDAEAAAHNPLWAEWLQQYGMLPRHPSQLYQFALEGICLFAVVWLFSKKQ
                     RPTGQVASLFLGGYGIFRFIAEFARQPDDYLGLLTLGLSMGQWLSVPMIVLGIVGFVR
                     FGMKKQH"
     gene            complement(3509..4171)
                     /locus_tag="WIX18_000922"
     CDS             complement(3509..4171)
                     /locus_tag="WIX18_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YecA family protein"
                     /protein_id="HEZ5238052.1"
                     /translation="MDSQKFTEASKRRLSELLDAKSEQGNTMRCDEVQGFMTALLSGP
                     DKLTPLDWLPEVLGDESQFTAAERSEIERLVLAMAMETTAAMSDKKLPDLWLYENEDG
                     GSDFYTWCNAYLYGLDIVPTDWFEAVDDEAFEELFYPIMALGGIYDEEDNGTIRLQFT
                     EGELAELESELPYALADIYRYWQAVINKPQTVRREGEKTGRNDPCPCGSGRKYKACCG
                     KN"
     gene            complement(4269..6062)
                     /locus_tag="WIX18_000923"
     CDS             complement(4269..6062)
                     /locus_tag="WIX18_000923"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HEZ5238053.1"
                     /translation="MQLDIDRLVAYFGGVNALAEALKRHDPENAATTAAIYKWRTRGS
                     LPLAQLQKLTALAESQGRPLDLNAFLQKNESLERTEMTQANRVIIFDTTLRDGEQSPG
                     AAMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTITKSTVCSLSRAIE
                     RDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDV
                     EFSCEDALRSEIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNG
                     GKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVNGLGERAGNASVEEIVMALKVRH
                     DLFGLETGIDTTQIVPSSKLVSTITGYPVQPNKAIVGANAFSHESGIHQDGVLKHRET
                     YEIMSAESVGWSANRLSLGKLSGRNAFKTKLADLGIELESEEALNAAFARFKELADKK
                     REIFDEDLHALVSDEMGNMNTESYKFISQKISTETGEEPRADIVFSIKGEEKRASATG
                     SGPVDAIFKAIESVAQSGATLQIYSVNAVTQGTESQGETSVRLARGNRVVNGQGADTD
                     VLVATAKAYLSALSKLEFSAAKPKAQGSGTI"
     gene            6301..7410
                     /gene="proB"
                     /locus_tag="WIX18_000924"
     CDS             6301..7410
                     /gene="proB"
                     /locus_tag="WIX18_000924"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HEZ5238054.1"
                     /translation="MKYKRIVFKVGTSSITHSDGSLSRGKIQTITRQLAALHHAGHEL
                     VLVSSGAVAAGFGALGFKKRPAKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILL
                     NRTDFADKRRYQNAGGALSVLLQRRAIPIINENDTVSVEELKIGDNDTLSAQVAAMIQ
                     ADLLVLLTDIDGLYTGNPNSNPDAVRLDRIEHINHEIIEMAGGAGSSNGTGGMLTKIK
                     AATIATESGVPVYICSSLKPDALAEAADNQADGSFFVPRAKGLRTQKQWLAFYSESRG
                     GVYVDEGAEHALSEQGKSLLMSGVAGIEGHFSRMDTVTVYSNATKQPLGKGRVLFGSA
                     AAEDLLKSRKAKGVFIHRDDWISITPEIRLLLTEF"
     gene            7423..8685
                     /locus_tag="WIX18_000925"
     CDS             7423..8685
                     /locus_tag="WIX18_000925"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HEZ5238055.1"
                     /translation="MSNTQKQLALAKAAKKSVNTADTEEKNRALLAMADSLEAAAADI
                     LAANRLDLEAAAGKIPESMTDRLLLDGKRICAMADGIRAVAALPDPVGEILETSTLPN
                     GLEIVKKRVAMGVIGIIYESRPNVTSDAAALALKSGSAVVLRSGKDAFQSARAIVAAL
                     KAGLAQTRIDPDALQLIEDTGREGSYEMMRAKDYLDLLIPRGGAGLIRAVVENAVVPV
                     IETGTGIVHIYIDKDADWDKALRIVYNAKTSRPSVCNSMEVLLVHEDIAADFLPKLER
                     LLVRDRIKAGLPPVRFRLDPQAARHIGGEAAGADDFDTEFLDYILAVKTVASVEEAVG
                     HIETHGTHHSDGIVTENRHAADYFTTHIDSAAVYVNASTRFTDGGEFGLGCEMGISTQ
                     KLHARGPMGLKELTSYKYIIRGVGQVRE"
     gene            complement(8757..11789)
                     /locus_tag="WIX18_000926"
     CDS             complement(8757..11789)
                     /locus_tag="WIX18_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsK"
                     /protein_id="HEZ5238056.1"
                     /translation="MFWIVLIVILLLALAGLFFVRAQSEREWMREVSAWQEKKGEKQA
                     ELPEIKDGMPDFPELALMLFHAVKTAVYWLFVGVVRFCRNYLAHESEPDRPVPPASAN
                     RADVPTASDGYSDSGNGTEEAETEEAEAAEEEAADTEDIATAVIDNRRIPFDRSIAEG
                     LMPSESEISPVRPVFKEITLEEATRALNSAALRETKKRYIDAFEKNETAVPKVRVSDT
                     PMEGLQIIGLDDPVLQRTYSRMFDADKEAFSESADYGFEPYFEKQHPSAFSAVKAENA
                     RNAPFRRHAGQAEAKSPDVSQGQSVSDGTAVRDARRRVSVNLKEPNKATVSAEARISR
                     LIPESRTVVGKRDVEMPSETENVFTETVSSVGYGGPVYDETADIHIEEPAAPDAWVVE
                     PPEVPKVPMPAIDIPPPPPVSEIYNRTYEPPSGFEQAQRSRIAETDHLADDVLNGGWQ
                     EETAAIADDGSEGAAERSNGQYLSETEAFGHDSQAVCPFENVPSERPSCRVSDTEADE
                     GAFPSEETGAVSEHLPTTDLLLPPLFNPEATQTEEELLENSITIEEKLAEFKVKVKVV
                     DSYSGPVITRYEIEPDVGVRGNSVLNLEKDLARSLGVASIRVVETILGKTCMGLELPN
                     PKRQMIRLSEIFNSPEFAESKSKLTLALGQDITGQPVVTDLGKAPHLLVAGTTGSGKS
                     VGVNAMILSMLFKAAPEDVRMIMIDPKMLELSIYEGIPHLLAPVVTDMKLAANALNWC
                     VNEMEKRYRLMSFMGVRNLAGFNQKIAEAAARGEKIGNPFSLTPDDPEPLEKLPFIVV
                     VVDEFADLMMTAGKKIEELIARLAQKARAAGIHLILATQRPSVDVITGLIKANIPTRI
                     AFQVSSKIDSRTILDQMGAENLLGQGDMLFLPPGTAYPQRVHGAFASDEEVHRVVEYL
                     KQFGEPDYVDDILSGGGSEELPGIGRSGDGETDPMYDEAVSVVLKTRKASISGVQRAL
                     RIGYNRAARLIDQMEAEGIVSAPEHNGNRTILVPLDNA"
     gene            11954..12634
                     /locus_tag="WIX18_000927"
     CDS             11954..12634
                     /locus_tag="WIX18_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter permease"
                     /protein_id="HEZ5238057.1"
                     /translation="MIFQTVWFSDMVLSVSWIVLILILAASAPSAFRSLARYRSALPL
                     CTVIFSAAWCLNASAGGGQLAQMNYHLLAVNLVALMVGTSAAFWLAALLMLPYCLLFA
                     GSAGAYPPNALVLILPALAVNRLSRMLVNRLPPNIFIFIFVNGFLASAAGILLTGLVL
                     TGILDAANAFPSEILWTTALPVFILLAWAEAFLSGISTAIFVALKPHWINTFDDNRYL
                     KSDRGIWR"
     gene            12663..13022
                     /locus_tag="WIX18_000928"
     CDS             12663..13022
                     /locus_tag="WIX18_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HEZ5238058.1"
                     /translation="MLSNIIPLSIGAALGATARWLLNLAVPAAMSPATGNLFANWTGA
                     LLIGIFAETINHPQWKLLLITGFLGSLTTLSGFSLETVTLLQSNRPASALANIFLHTA
                     GSLLLTWLGLKIGAAVK"
BASE COUNT         2864 a         3742 c         3383 g         3108 t
ORIGIN      
        1 tctaaagaaa ccttttttcc cgataagttt ccgtgccgac aggtctagat tcccgcctgc
       61 gcgggaatga cgaaatttca aagttatggc gttatcggaa aaacagaaaa tcaaagccgg
      121 agaatttatc ccaaacaact ggatttcaaa aaaaccagat tcccgccttc gcgggaatga
      181 cggattttag gtttctgttt tggtttctgt tttcgcggga ataacaactt agaaattgcc
      241 cgaaacccca aaaacagaaa ccggacaaac gggttttccg ccaaagccgg cattttccga
      301 ctttgcttca ggcatcttcc ccaccgccca aaatcatcga accgataccg gcatcggtaa
      361 agatttccag caaaagcgcg ttgggcaacc tgccgtcgat gatatgcgtg gctttcacac
      421 cgttgacggc ggcttcgacc gcagaagcga ttttcggcag cataccgcca tacagcgtgc
      481 cgtcggcaat cagttcatca atccgtttcg gcgtgagttt ggtcagcaga ttgcccgttt
      541 tgtccatcac accggcgata ttcgtcatca tcaagagttt ttcagcgttt aattcttccg
      601 ccaatttgcc tgccaccaaa tcggcgttga tgttgaacgc ttcgcctttt tcacctacgc
      661 cgacgggggc gacgacggga atgcagccac gttctatcag ccctttaacc aaacctgtat
      721 caatgctttc caccgtaccg acctgtccga tgtccacgcc attctgttcg ggcgtatcga
      781 tcaaaagttt cttcgcctta atgaaatgat cgtcgcgtcc gctcacgccg accgcgtgtc
      841 cgccatatgt gttaatcatc gacacgattt ctttattgac atgcccaccc aacaccattt
      901 cgacaatatc catcgcctct ttgtcggtaa cgcgcattcc ttggacaaac tccccctttt
      961 tgccgacttt ttcaagcatc gcattgatct gcggcccgcc gccgtgaacg atgacgggat
     1021 gaatgccgac cagcttcagc agtacgacat cgcgggcaaa cccttctttc aaggcaggtt
     1081 cggtcatcgc gttgccgccg tacttgatga cggcgaccga accggaaaac cggcggatgt
     1141 aaggcagcgc ttcggcaagg atacgcgctt tgtcggcggc ggaaataatg ttttcagact
     1201 ccataacggc tccctattgt tgacaatttc ggcttatgtt aacgccaaac gccgtctgaa
     1261 acaatcttca gacggcatcc ggcagacctt cgggcaggtt gaagccttgc gatacgggcg
     1321 gtaaaatcac agtttatccg gttcgagaaa ccggcgacag caaggacttt cccatgatta
     1381 aaatcagcac ccgcttcgat gccggctcgg tcgtcgtcaa agacctgacc gatccttcca
     1441 acatccgcct cgccctgcgt cccgacaacg cctccgattt tgcacaatgg ttctacttcc
     1501 ggctgcaagg cgcggcatat caaaactgca tcatgcattt tgaaaacgcg gcagaagccg
     1561 cctacccgaa aggctgggaa ggctatcagg cgtgtgcctc atacgaccgc cgcaactggt
     1621 tccgcgtacc gacttcctac gaaaacggcg tactgaccgt caatcatacg ccgctgtcca
     1681 acagcgtgta ttacgcctat ttcgaacctt actccgaaga acagcattta aacctcctcg
     1741 gcgacgcgca aggcagcggc ctgtgccgca tcgacgactt gggcagcacc gtgcaagggc
     1801 gcgacatcaa tctgctgacc atcggcaatc aggtcgaaag cgatctgaaa atctggatta
     1861 ccgcccgcca gcatccgggc gaaaccatgg cggaatggtt tgtcgagggg ctgctcggca
     1921 ggctgctcga tccgcaagac ccgacagcgc gcaccctgct cgaccgcgcc acgttctata
     1981 tcgtccccaa tatgaacccc gacggttcgg cactgggcaa ccttcgtacc aacgccgccg
     2041 gtgcgaacct caaccgcgaa tgggaaaatc cgactttgga aaaaagcccc gaagtgttct
     2101 tcgtgcgcga aaaaatgctg gaaaccggcg tggatttgtt cttggacatc cacggcgacg
     2161 aagggctgcc ctttatcttt gttgcaggaa ctgaaggcgt gccaaactac aatccgcgca
     2221 tttccgcgtt ggaaacacag ttcaaaaccg cccttttgaa cgccagcccc gatttccaag
     2281 acgaatacgg ttacgaaaaa gatgcgcccg gtcaggcaaa catgaccttg gcaacaaact
     2341 gggtcggcaa ccgtttcaac tgccttgcct atacgttgga aatgccgttc aaagacaatg
     2401 ccaacctgcc cgacgacgat ttcggatgga acggtcaacg gtcgttgcgc ttgggcgaag
     2461 ccgcgttgtc cgccatcctc aacatcatcg gcgatttgcg ctgaaaccct tattgcagaa
     2521 atgccgtctg aagcatcatg cctttcagac ggcatttgaa aacgaaagcc cgttatgatt
     2581 acccatcccc aattcgaccc cgtccttatc agtatcggcc cgcttgccgt ccgctggtat
     2641 gccctaagct acatcctcgg atttattctt tttacctttc tcggcagaag gcgcatcgcg
     2701 caaggcttgt ccgtttttac caaagaatcg ctcgacgact tcctgacatg gggcattttg
     2761 ggcgtaattt tgggcgggcg tttgggttac gtcctgtttt acaagttttc cgactacctc
     2821 gcccatccgc ttgatatttt caaggtatgg gaaggcggaa tgtcgttcca cggcggcttt
     2881 ttgggtgtag ttattgccat atggttgttc ggccgcaaac acggcatcgg cttcctcaaa
     2941 ctgatggaca cggtcgcacc gctcgttccg ctgggtctcg cttcgggacg tatcggcaac
     3001 ttcatcaacg gcgaactttg gggacgcgtt accgacatca acgcattttg ggcaatgggc
     3061 ttcccgcagg cgcgttacga agatgccgaa gccgccgcgc acaatccgct ttgggcagaa
     3121 tggctgcaac aatacggtat gctgccgcgt catccctcgc agctttatca gtttgcactt
     3181 gaaggcatct gcctgttcgc cgtcgtttgg ctgttctcta aaaaacagcg gccgaccgga
     3241 caagtcgcct cgctcttcct cggcggctac ggcatattcc gcttcattgc cgaattcgca
     3301 cgccaacccg acgactatct cgggctgctg accttggggc tgtcgatggg gcaatggttg
     3361 agcgtcccga tgattgtttt gggtatcgtc ggctttgtcc ggttcggcat gaaaaaacag
     3421 cactgaccgc ctgtgaaaaa taccgtctga aacatggaaa tccggtttca gacggcattt
     3481 ttacgtttgg ttcatggaaa caaacgcttc aattcttacc gcaacacgcc ttgtattttc
     3541 tgccgctgcc gcacggacag ggatcgttcc tgcctgtttt ttcgccttcc ctgcggacgg
     3601 tttgcggctt gttgatgacc gcctgccagt agcggtagat atccgccaat gcataaggca
     3661 actcggattc cagttccgcc agctcgcctt ctgtgaattg cagacggata gtgccgttgt
     3721 cctcttcgtc gtaaataccg cccaatgcca tgatgggata aaacaactct tcaaacgctt
     3781 catcatcgac ggcttcaaac caatcggtcg gcacaatatc caaaccgtaa agataagcat
     3841 tgcaccatgt gtaaaaatcg ctgccgccgt cttcgttttc atacagccac aaatcgggca
     3901 gttttttatc cgacatcgcg gcggttgttt ccatcgccat tgccaaaacc agccgttcga
     3961 tttcggaacg ttcggcggcg gtaaattgcg attcgtcgcc caacacttcg ggcagccagt
     4021 cgagcggtgt caatttgtcc ggcccgctca acagcgccgt cataaaacct tgaacctcgt
     4081 cgcaacgcat cgtgttgcct tgttcgcttt tggcatccaa caattcgctc aaccgccgtt
     4141 tggatgcttc ggtaaatttt tgggaatcca tcatttaacc ttttaaaatg ggtttaatac
     4201 ctaattataa tcgcaatatg ccgtctgaag cctttttctg cttcagacgg catcgtctgt
     4261 tttcacgctc aaatcgtacc gctgccttgc gctttcggtt tggcggcact aaattccagt
     4321 ttgctcaagg cggaaaggta ggctttggcg gtggcaacca aaacgtcggt atccgcgccc
     4381 tgaccgttga cgacgcggtt gccgcgtgcc agacggacgc tggtttcgcc ttggctttcc
     4441 gtaccttgcg tgacggcatt gacggaataa atctgcaaag tcgcgccgct ttgcgccacg
     4501 ctttcaatcg ctttgaaaat tgcatcaacc ggaccggaac cggttgcgga agcgcgtttt
     4561 tcttcgcctt tgatgctgaa cacgatgtcg gcgcgcggct cttcgccggt ttcggtgctg
     4621 attttttggg aaatgaattt gtagctttcg gtattcatat tgcccatttc gtccgacacc
     4681 agcgcgtgca ggtcttcatc gaagatttcg cgttttttgt cggcgagttc tttgaagcgt
     4741 gcaaatgccg cgttcagtgc ctcttcgctt tccaactcga tgcccaaatc cgccagcttg
     4801 gttttgaagg cgttgcggcc ggacaatttg cccaagctca atcggttagc cgaccaaccg
     4861 accgattcgg cagacataat ctcgtaagtt tcgcggtgtt tcagcacccc gtcctgatgg
     4921 atgcccgatt catgcgaaaa ggcattggca ccgacaatgg ctttgttggg ctgcacggga
     4981 tagcccgtaa tggtggacac cagtttggac gaaggcacga tttgcgtggt atcgatgccg
     5041 gtttccaagc cgaacaagtc gtggcgcact ttcaacgcca tcacgatttc ttcaaccgaa
     5101 gcattgcctg cacgttcgcc caagccgttg acagtacatt ccacctgacg cgcaccgcct
     5161 tttaatgcgg caagcgaatt ggcaaccgcc aagcccaaat cgttgtggca gtgtgccgac
     5221 caaacgactt tgccgccgtt gggcgttttg gcaatcagtt cgcggaaaaa ttcttcggtt
     5281 ttgtacggga tggaatagcc gacggtatcg ggaatattga tggtggtcgc gcccgcttca
     5341 attaccgcgc cgcagatttc ggcaaggaaa tcgatttccg aacgcaacgc gtcttcgcag
     5401 gaaaattcca catcgtcggt gtattcacga gcgattttca ccgctttgac cgccgcctca
     5461 atcacctgct tcggcttcat cttcaatttg tactccatat ggatggggct ggtggcgatg
     5521 aaggtgtgga tgcgtttttt cggcgcgggc gcaacggcct cacccgcctg acggatgtcc
     5581 cgctcgatgg cgcgggacaa tgaacagacc gttgatttgg taatggtttt cgcaatcgca
     5641 ttgaccgcct cgaaatcgcc cgggctggca gcggcaaaac ccgcttcgat gatgtccaca
     5701 cccaattttt ccagctggcg ggcgacgcgg attttttcct ctttggtcat agcagcgccg
     5761 ggcgactgct cgccgtcgcg cagggtggtg tcgaaaatga taacgcggtt ggcctgtgtc
     5821 atttctgttc tctccagaga ttcgtttttt tgtaaaaaag cattcaaatc cagcggcctg
     5881 ccttgcgatt cggcaagtgc agtcaatttt tgcagctgcg ccaaaggcag cgagccgcgc
     5941 gtgcgccatt tgtagatggc ggcagttgtc gcggcatttt cgggatcgtg ccgtttcaac
     6001 gcttcggcaa gcgcgttcac gccgccgaaa taggcgacca gacggtctat atctaattgc
     6061 atggtagtcc ttgtctaaaa tcaatctgcc cgcagcagaa atatggacag gattatacgc
     6121 attttagaca aaacggcaat atcaatttga aaaaatctca ataactcatc atagatttta
     6181 ttaattttat acattttgtc tattttattg caggcccagc gcaattgttg acaattgcgg
     6241 cagaacaggg caaattcgac agcaacaaac caaacgctac aaacgcaaag aacagaaaca
     6301 atgaaataca agagaatcgt atttaaagtc ggcacatctt cgattaccca ttcggacggc
     6361 agcctctcgc gcggcaaaat ccaaaccatt acccgccagc ttgccgcatt gcatcatgcg
     6421 ggacacgagc tggtcttggt ttcatccggc gcggttgcgg cagggttcgg tgcgctgggt
     6481 ttcaaaaaac gtccggccaa aatcgccgac aaacaggctt ccgccgccgt cgggcagggg
     6541 ctgctgatgg aagaatatac ggcaaacctg tcttcagacg gcatcgtgtc cgcgcaaatc
     6601 ctgctcaacc gcaccgactt tgccgacaaa cgccgctacc aaaatgccgg cggcgcgctt
     6661 tccgtgctgc tgcaacgccg cgcgattccc attattaatg aaaacgacac ggtttcggtt
     6721 gaggagttga aaatcggcga caacgacaca ttgagtgcgc aagtggcggc gatgatacag
     6781 gcagacctct tggtgctgct gaccgacata gacggtcttt acacgggcaa cccgaacagc
     6841 aatcccgatg ccgtacggct ggacagaatc gaacacatca accatgaaat catcgaaatg
     6901 gcaggcggcg cgggctcgtc aaacggcacg ggcggtatgc tgaccaaaat caaagcggcg
     6961 acgattgcga ccgagtccgg cgtaccggtc tatatctgtt cctcgctcaa acccgatgcg
     7021 cttgccgaag cggcagataa tcaggcggac ggctcgtttt tcgtcccccg cgccaaaggt
     7081 ttgcggacgc agaagcaatg gctggcgttc tattccgaaa gccggggcgg cgtttatgtg
     7141 gacgaaggtg cggaacacgc tttgtccgaa cagggaaaga gcctgctgat gtcgggcgtt
     7201 gccggaatcg aagggcattt ttcccgtatg gacaccgtaa ccgtgtacag caacgcaacc
     7261 aaacagcctt tgggcaaagg gcgcgtcctt ttcggctctg ccgccgccga agacctgctc
     7321 aaatcgcgca aagcgaaagg cgtgttcatc catcgggacg attggatttc catcacgccc
     7381 gaaatacgcc tgcttctgac cgaattttag aaaaggaaac ccatgtcaaa cacacaaaaa
     7441 cagcttgccc ttgccaaagc ggcaaaaaaa tccgtcaaca cggcggatac ggaagaaaaa
     7501 aaccgcgcgc tgcttgctat ggcggacagt ctggaagcgg cggcggcaga tattttggcg
     7561 gcaaaccgtt tggatttgga agcggcggca ggcaaaattc ccgaaagcat gaccgaccgc
     7621 cttttgttgg acggcaaacg catttgcgcg atggcggacg gcatcagggc ggttgccgcg
     7681 ctgcccgacc ccgtgggcga aatactggaa acctcgactc tgcccaacgg cttggaaatc
     7741 gtcaaaaagc gtgtggcgat gggcgttatc ggcattattt acgaaagccg cccgaacgtt
     7801 acgtccgatg cggcggcttt ggcactgaaa agcggcagcg cggtcgtact ccgcagcggc
     7861 aaagatgcat tccaatccgc acgcgccatc gttgccgcac tcaaagccgg tttggcgcaa
     7921 acccgcatcg accccgacgc gctccagttg attgaagaca ccgggcgtga gggcagttac
     7981 gaaatgatga gggcgaaaga ttatctagac ctgctgattc cgcgcggcgg ggcggggctg
     8041 atacgggcgg tggttgaaaa tgccgtcgtg ccggttattg aaacggggac gggcatcgtc
     8101 cacatttata tcgacaagga cgcggattgg gacaaggcgc tccgtatcgt gtacaacgcc
     8161 aaaaccagcc gtccgtccgt gtgcaactcg atggaagtgc tgctggtgca tgaagacatt
     8221 gctgccgact tcctgcccaa gctcgaacgg ctgttggttc gcgaccgtat aaaagccgga
     8281 ctgccgcccg tccgcttccg tttggatccg caggcggcac ggcatatcgg cggcgaagcg
     8341 gcgggtgcag acgatttcga taccgagttt ttagactaca tcctcgccgt gaaaaccgtc
     8401 gcttcggtcg aagaggcggt cgggcacatc gaaacgcacg gcacgcacca ttcagacggc
     8461 atcgttaccg aaaaccgcca cgctgcggac tatttcacga cccatatcga ttctgccgcc
     8521 gtgtatgtca acgcgtccac gcgctttacc gacggcggcg aattcggctt gggttgcgaa
     8581 atgggcatct ccacgcaaaa actccacgcc cggggtccga tgggtttgaa agagctgaca
     8641 agctataaat acatcattcg gggcgttggg caggtcaggg aataatccgc attcaaacgt
     8701 ccgataaaaa tgccgtctga aacagtcttc agacggcatt tccatttgca aaaaaatcaa
     8761 gcattgtcca aggggacgag aatcgtacgg ttgccgttgt gttccggcgc ggatacgatg
     8821 ccttccgcct ccatctggtc aatcagccgc gcggcgcggt tgtagccgat acgcaatgcg
     8881 cgctgcacgc cagaaatgct ggctttgcgc gttttcaaaa caacggacac ggcctcatcg
     8941 tacatcggat cggtttcgcc gtcgccgctg cgcccgatgc cgggcagctc ttcgctgccg
     9001 ccgccgctca aaatatcgtc aacatagtcc ggttcgccaa actgcttcag atattcgacc
     9061 acgcggtgca cctcttcatc cgaggcaaac gcgccgtgaa cgcgctgcgg ataggcagta
     9121 cccggcggca ggaacagcat atcgccctga ccgagcaggt tttccgcgcc catttggtcg
     9181 agaatcgtgc ggctgtcgat tttgctggac acttggaacg cgatacgcgt cgggatgttc
     9241 gccttaatca gacccgtgat gacatcgacg ctggggcgtt gtgtggcaag gataagatgg
     9301 atgcctgccg cgcgggcttt ttgggcgagg cgggcaatca gttcctcgat tttcttgcct
     9361 gccgtcatca tcaaatcggc aaactcatcg accaccacca cgataaacgg cagtttttcc
     9421 aaaggttcgg gatcgtcggg cgtgaggctg aacgggttgc cgattttctc cccccttgct
     9481 gcggcttcgg cgattttttg attgaaaccc gcaagattgc gcacgcccat aaagctcatc
     9541 aggcggtagc gtttttccat ttcgttaaca caccagttca gcgcgtttgc cgccagcttc
     9601 atatcggtaa cgacaggggc gagcaggtgc gggatgcctt cgtaaatgct caattccagc
     9661 attttcggat cgatcataat catacgcacg tcttccggcg cggctttgaa aagcatagac
     9721 agaatcatcg cgttgacacc caccgatttg cccgaaccgg tcgtgccggc aaccagcaaa
     9781 tgcggtgctt tgcccaagtc ggttacgacg ggctgtccgg tgatgtcctg accgagcgcg
     9841 agcgtcagct tggatttgga ttcggcaaac tcgggcgaat tgaagatttc gctcaggcgt
     9901 atcatttggc gtttcgggtt cggaagttcc aaacccatac aggttttgcc gaggatggtt
     9961 tcgacaacgc ggatggaagc cacgccgagc gaacgcgcca agtctttttc cagatttaga
    10021 acggaattgc cgcgcacgcc gacatcgggt tcgatttcat aacgcgtaat cacggggccg
    10081 gaataagaat cgacaacctt gaccttgact ttgaactccg ccaatttttc ttcgatggtg
    10141 atgctgtttt ccaacagttc ttcttcggtt tgcgtcgcct cgggattgaa cagcggcggc
    10201 agaagcaggt cggttgtcgg caggtgttcg gataccgcac cggtttcttc agatgggaac
    10261 gccccttcat ccgcttccgt atccgatacc cggcaggacg ggcgttcaga cggcacattt
    10321 tcaaacggac aaaccgcctg actgtcatgc ccgaacgctt cggtttccga cagatattgc
    10381 ccgtttgacc gctctgccgc accttcactg ccgtcatctg caatagcggc ggtttcctcc
    10441 tgccaacctc cattcaaaac atcatcggca agatggtcgg tttcggcaat gcggctgcgt
    10501 tgcgcctgct cgaatcctga cggcggttca taggtacggt tgtagatttc cgatacggga
    10561 ggcggcggcg gaatatcgat tgcgggcatg ggaactttcg gcacttcggg tggttcgacc
    10621 acccaagcat cgggcgcggc aggttcttca atatggatat cggcagtttc atcataaacc
    10681 ggaccgccgt atcccacaga cgaaacggtt tccgtgaaaa cattttcggt ttcagacggc
    10741 atttcgacat cccgtttccc gacaaccgtc cgactttccg gaatcaggcg cgaaatccgc
    10801 gcctccgcag aaaccgttgc cttgttcggt tctttcaaat tgacggaaac gcggcggcgg
    10861 gcatcgcgga cggctgtgcc gtctgaaacg gactgtcctt gggaaacatc cggggatttt
    10921 gcctccgcct gccctgcatg acggcggaac ggcgcattcc gtgcattttc ggctttgact
    10981 gcagaaaagg cagacggatg ctgcttctca aaatacggct caaatccgta atccgcagac
    11041 tcggaaaacg cttctttgtc cgcatcgaac atacgggaat acgtgcgttg aagcacaggg
    11101 tcgtccaaac cgataatctg tagcccttcc atcggggtat cggacacgcg gactttgggg
    11161 accgctgttt cgtttttctc aaatgcatcg atatagcgtt ttttcgtttc ccttaaagcc
    11221 gcgctgttta aagcacgcgt tgcttcttcc aaagtgattt ccttaaaaac cggacggacg
    11281 ggcgaaattt cgctttcaga cggcatcaac ccttcagcaa tactccggtc gaatgggatg
    11341 cggcggttgt cgattacggc agttgcaatg tcttccgtat cggcagcctc ttcctccgca
    11401 gcttctgctt cttccgtttc cgcttcttcc gtcccgtttc cactgtctga atatccgtcg
    11461 gatgcggtcg gaacatccgc acggtttgca gaagcaggcg gaacgggcct gtccggttcg
    11521 gattcgtgcg ccagatagtt tcggcagaaa cggacgacac cgacaaacag ccaatacact
    11581 gccgttttga cggcatggaa aagcatcagg gcaagttcgg gaaaatcggg cataccgtct
    11641 ttgatttcag gcagctccgc ctgtttttcc cctttctttt cctgccacgc agaaacctcg
    11701 cgcatccact cgcgttcgga ttgtgcgcgg acaaaaaaca agccggcaag cgcaagcaac
    11761 aaaataacga tcaaaactat ccaaaacata tgccgtttcc cgcaagacaa acgattaaac
    11821 gggtttattt taacgtgttt ccatcccaaa aaaaacaacc ggtcggcaat tctgccgaaa
    11881 ccgattcggc tttcggtttg cccccgccga cagtataata gccgtccttt cccttaatct
    11941 ttgcggcatt gccatgattt tccaaacagt ctggttttca gatatggtac tgtcggtttc
    12001 gtggattgtc cttatcctga tactggcagc ttccgcgccg tccgcattcc gctcgcttgc
    12061 ccgctaccgt tccgcccttc ccctgtgtac cgtaattttt tccgcagcat ggtgtctgaa
    12121 cgcctctgcc ggcggcggac agcttgccca gatgaactac catctgctcg ccgtcaatct
    12181 ggttgcactg atggtgggca cttccgccgc cttttggctt gccgcgctgc tgatgctgcc
    12241 ctactgcctg ctgtttgccg gttctgccgg cgcatatccg ccgaacgctt tggtgctgat
    12301 tctgcccgcg cttgccgtca accgcctgtc gcgtatgctg gtcaaccgcc tgccgcccaa
    12361 tattttcatc tttattttcg tcaacggctt tctcgcttcc gccgccggca ttctgttgac
    12421 cgggctggtg ctgaccggta ttttggatgc tgcaaacgct tttccgtccg aaatattgtg
    12481 gacgaccgcc ctgcccgtct ttattctgct ggcgtgggcg gaagccttcc tcagcggcat
    12541 ttcaactgcc atatttgttg cactgaagcc ccattggatc aacactttcg acgacaaccg
    12601 ctatctgaag tccgaccgcg gcatatggcg gtagccttca gacggcatag gcagacaaaa
    12661 ccatgctttc caacatcatc cccctttcca tcggtgcggc actcggtgca acggcgcgtt
    12721 ggctgctcaa cctcgccgtt cctgccgcca tgtctcccgc cacgggcaac ctgtttgcca
    12781 actggacggg cgcgctgctc atcggcatct ttgccgaaac catcaatcac ccgcaatgga
    12841 agctgctgct gattaccggt tttctcggca gcctgaccac gctttccgga ttttcactgg
    12901 aaaccgtaac cctgctccaa tcgaatcgtc ctgcttcagc acttgccaat attttcctac
    12961 acacggcagg ttcgctgctg ctgacttggc tcgggctgaa gataggggcg gcagtcaaat
    13021 aaccgcaaca aattgcctcc ctttgttttg acataatcta taaattagct tcgcttgttt
    13081 aaatactggc tgtgcca
//
LOCUS       DAWITQ010000041        13088 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.041, whole genome shotgun sequence.
ACCESSION   DAWITQ010000041 DAWITQ010000000
VERSION     DAWITQ010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13088)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13088)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13088
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.041"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(348..527)
                     /locus_tag="WIX18_000929"
     CDS             complement(348..527)
                     /locus_tag="WIX18_000929"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238059.1"
                     /translation="MRHFFIRQHRRRIIKRRAHPPGVRQLHRIAHCLRRPVLCGEPFY
                     GFLFESNPLRLIEAV"
     gene            complement(488..1012)
                     /locus_tag="WIX18_000930"
     CDS             complement(488..1012)
                     /locus_tag="WIX18_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HEZ5238060.1"
                     /translation="MQTRILSAVLLAFSTAAFAGGAFTLQFDNPSEDGGFTQNQLLSA
                     PYGFGCSGGNASPALSWKNPPAGTKSFVLTVYDKDAPTGLGWMHRVVADIPADVHRRN
                     ATSLQLSRCANIADDQSAAISAVISLRICRIRLTPSYTAKPMPSCCNHANTPQSATSA
                     ALCGTSSSVSTAAA"
     gene            1323..2075
                     /locus_tag="WIX18_000931"
     CDS             1323..2075
                     /locus_tag="WIX18_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEZ5238061.1"
                     /translation="MITLPSLNNLPSKWDEIRYWLETRVCECGVMPHPNLTECEAGQF
                     DRDFWDNIGCAPEEYVRIRRAIRLLEARYPDSLNELVCAAIATPLGEMLAVFGNKGLC
                     LLEFVGQKHLEQEIAAVQKALRGRFVFREDERTQLLRQELDLYFKGRLKTFATPLEQI
                     GTEFQKQAWDALLAIPYGETRSYKEQAQRLGNPKAVRAVAAANGQNKVSVLIPCHRVI
                     GSDGKLTGYAGGLNRKQFLLALERGEVQTALF"
     gene            2266..2341
                     /locus_tag="WIX18_000932"
     tRNA            2266..2341
                     /locus_tag="WIX18_000932"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2299..2301,aa:Asn,seq:gtt)
     gene            2472..3482
                     /gene="waaF"
                     /locus_tag="WIX18_000933"
     CDS             2472..3482
                     /gene="waaF"
                     /locus_tag="WIX18_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HEZ5238062.1"
                     /translation="MSIKILIISPSWIGDCVMTQPLFRRLKELHPGCTIDVFAPKWSM
                     AVFERMPEVNEILENPFGHGALELKRRWRVGRDLGRRGYDQVIVLPGSLKSAVIALAT
                     GIAKRTGYVGESRYFLLNDIRRLDKERLPLMVDRYTALAHPSQEDFDGHSGFPEFSID
                     ERRREISVETFGLNLGKPVLAFCPGAEFGPAKRWPTRHFAELGKHYLAAGWQVWLFGS
                     QKDDEIAEEINCLSDGMCVNLCGKTDLSQAMDLLSLADTVVCNDSGLMHLAAALGRKV
                     VAVYGSSSPTHTPPLSDKAKIVSLHLECSPCFKRECPLGHTDCLNKLYPEKIVQAVEE
                     AV"
     gene            3537..3983
                     /gene="smpB"
                     /locus_tag="WIX18_000934"
     CDS             3537..3983
                     /gene="smpB"
                     /locus_tag="WIX18_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEZ5238063.1"
                     /translation="MAIANNKKAFHDFFIEDRIEAGLVLEGWEVKAIRAARVQLKESY
                     IYWKKDAFYLVGCHITALPTASTHIKPDAVRPRKLLLNQSEINKLIGKTERAGYTIVP
                     LDLHFSRGKIKMEIGLAKGKKQHDKRQSMKEADWKREKQRLIKHTR"
     gene            4349..6391
                     /locus_tag="WIX18_000935"
     CDS             4349..6391
                     /locus_tag="WIX18_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_180374913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HEZ5238064.1"
                     /translation="MYYETRSKQASKQKFKKSFIISLFFSILYTSPLLAVDYVYDNSK
                     LTNEQIDRLKKLRDKSSEYWKQETYLLKPTNGSSQNSLKVPALYSKTHQFKNINNSKK
                     ISFYDKEYTEDYLVGFARGFGVEKRNGEEEKTLQQYFKDCVNTGNSNNDKCEQPSFEN
                     SGPRLIKSDIFALAPQIKNSHINSEILSVGNYIEWLRPTLNKLPSWQEHLYSGLDPFH
                     YIEVTDNSHVIGQTISLDEFRLENSLWEPRWDSDVGELKTTNADIRFNTKSESLLVKE
                     DYAGGARFRFAYDLKDKVSETPVLTFEKNITGTSDIIFENPIDDLKSLDGHQIIKVNG
                     TADKHAFRLSGKHQKGIYTLSLQQRPEGFFTKVQERDDISIYAQQAQAANTLFALRLN
                     DKNSDIFDRTLPRKGLWLRVIDGHSNQWVQGKTAPVEGYRKGVQLGGEVFTWQNESNQ
                     LSVGLMSGQAEQRSTFRNPDTDNLTTGNVKGFGAGIYATWHQLQDKQTGAYADSWVQY
                     QRFRHRINTEDATERFTSKGITASIEAGYNALLAEHFTKKGNSLRVYLQPQAQLTYLG
                     VNGKFSDSENAHVNLLGSRQLQTRVGVQAKAQFSLYKNIAIEPFAAVNALYHNKPFGV
                     EIDGERRVINNKTAIESQLGVAVKIKSHLTLQASFNRQTSKYHQAKQGALNLQWTF"
     gene            complement(6572..7939)
                     /locus_tag="WIX18_000936"
     CDS             complement(6572..7939)
                     /locus_tag="WIX18_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEZ5238065.1"
                     /translation="MPDLHTEFSRLLPADEIAELSPTLLKDQRNRFTSAPDIILQPRS
                     VESVQTIMRFCYEHRIPVTPQGGNTGLCGAAVSENGVLLNLSKLNRIRSINLSDNCIT
                     VEAGSVLQTVQQAAEASNRLFPLSLASEGSCQIGGNIACNAGGLNVLRYGTMRDLIIG
                     LEVVLPNGELVSHLHPLHKNTTGYDLRHLFIGSEGTLGIITAATLKLFARPSDKATAW
                     VGIPDIESAVRLLTETQAHFAERLCSFELVGRFAAELSSEFSKFPLPTHSEWHILLEL
                     TDSLPDSNLDDRLVEFLYKKGFTDSVLAQSEQERIHMWALRENISASQRKLGTSIKHD
                     IAIPIGRVADFVRRCAKDLEQNFKGIQIVCFGHLGDGSLHYNTFLPEILSNEVYRYEN
                     DINDAVYRNVLACNGTIAAEHGIGIIKKQWLDKVRTPAEIALMKSIKQHLDPYNIMNP
                     GKLLP"
     gene            complement(8049..8330)
                     /locus_tag="WIX18_000937"
     CDS             complement(8049..8330)
                     /locus_tag="WIX18_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238066.1"
                     /translation="MKKSLFAAALLSLVLAACGGEKAAEAPATEAPAAEAPATEAPAA
                     EAPATEAPAAEAPAAEAAATEAPAAEAPAAEAAATEAPAAEAPAAEAAK"
     gene            8804..9286
                     /locus_tag="WIX18_000938"
     CDS             8804..9286
                     /locus_tag="WIX18_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEZ5238067.1"
                     /translation="MAIVKNSVVSLHYEMYDANNQLLDKTEEPIAYLHGGYDGIFPLV
                     EEALHGKDAGDTVDVALSPDDAFGEQDPELVRIEDAGVFPVEVEVGMMFEADDPETGD
                     VVVYRVTDVADGKAVVDGNHPLAGMKIRFKATVESVRDASDEEIAHGHVHGPHGHHHH
                     "
     gene            9373..10185
                     /gene="hpnC"
                     /locus_tag="WIX18_000939"
     CDS             9373..10185
                     /gene="hpnC"
                     /locus_tag="WIX18_000939"
                     /EC_number="2.5.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="squalene synthase HpnC"
                     /protein_id="HEZ5238068.1"
                     /translation="MSVGHYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMP
                     SEARLAGLEGLRRELDVLASGGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDV
                     VKTRYGNFGELADYCRRSANPVGRIMLALYGKTDAVCVAQSDGICTALQLVNFWQDVA
                     VDWQKGRVYIPQDDLLKFGVSEGQIAEGRADAAFQRLMAYECRRAFRMLKAGSPLARE
                     LKGRIGLELRMIVLGAQLILQKLDACRYDVFAQRPVLDKKDWLIMLKRALWK"
     gene            complement(10256..10726)
                     /locus_tag="WIX18_000940"
     CDS             complement(10256..10726)
                     /locus_tag="WIX18_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1841 family protein"
                     /protein_id="HEZ5238069.1"
                     /translation="MYDVNTHDVRRFFARVWQQRLNPLQLSALEQKALRIVEAHPEYH
                     RYLERIEDHLDTDWLPENGESNPFLHMSLHLSVQEQAGIDQPHGIRAIHDTLCAKRGW
                     LEAEHEMMEALAETLWTAQRYGTGLDVNFYMTRLRKLIGLGAEDQARLNPHEIA"
     gene            10817..12658
                     /locus_tag="WIX18_000941"
     CDS             10817..12658
                     /locus_tag="WIX18_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HEZ5238070.1"
                     /translation="MQTNYLSETDSIMKKLICLFAVFLMLCGRAFALDANDLLPPEKA
                     FVPELAVADDGVNVRFKIADGYYMYQAKIVGKTDPADLLGQPSFSKGEEKEDEFFGRQ
                     TVYHHEAQVAFPYAKAVGEPYKLVLTYQGCAEAGVCYPPVDTEFDISGNGTYHPQTDE
                     PASAKDRFLQPSSQNGSGALPPPKGDEGGDSRFKLSWDTLNANLLAFFLAGLGLSFTA
                     CMYPLLPIVSSIVVGDKKAGKARAFVLSVVYVQGLALTYTLVGIVAGLTGALLTVWLQ
                     QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLSGGKIVSVFIMGILSA
                     LIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPLIAIGTFGGHILPKAGD
                     WMNAVKYAFGFILLAVAVYLATPHLPYYLVVALYTLLMLVPACMLLVNGRRQKRRPKA
                     VAFALGSILLIGGAWFGWQGANGKTTALHHFLTLNPPAEAGKSSEHGKMFADTAALKA
                     AMDTALKEHPDKPVVLDFYADWCISCKEMAAYTLNQPEVHQAVDMERFFQIDVTANTP
                     EHQALLKEYGLFGPPGVFVVRSDGSRSEPLLGFVKADKFIEWYEQNR"
BASE COUNT         3220 a         2881 c         3642 g         3345 t
ORIGIN      
        1 acgccgacgg aatatggttg aaacccggcc cttctgggcg atgggatttt ggtttatttt
       61 ttgggaagta accccttcca aatcagggta aacagggctg tgccttatgt gcggccctgt
      121 gtgttgaaac attgaggaat ataaccgtgc cgtcaaatta ctttatatac gcgcggacga
      181 ttgggtgctt tgggcggcat cgtgcaacat cataccgcct tgtaccgcag cgtggcggta
      241 tatgaaccgg ctgtgcttat cgtgcggcgc ggaagtaaga agctgcggcg ggtgaggcgg
      301 tcgcgttggc aggcggacag acgtttgacg ttattaatat tcccgatcta gacggcctct
      361 atcaggcgca atggattgct ttcgaacagg aaaccgtaga aaggttcgcc gcacaatacg
      421 ggacggcgca ggcagtgtgc gatgcggtga agctgccgca ccccgggcgg atgggcgcgg
      481 cgtttgatta tgcggcggcg gtgctgacgg atgaagaagt gccgcacaat gcggcggagg
      541 tcgcgctttg cggcgtgttg gcgtggttgc agcatgacgg catcggtttt gccgtgtacg
      601 aaggcgtcaa cctgatgcgg caaatccgca aactgattac cgccgatatg gctgcggact
      661 ggtcgtcggc gatgttggcg cagcggctta attgcagcga ggtcgcgttg cggcggtgga
      721 catcggcggg aatgtcggcg accacccggt gcatccagcc cagtccggtc ggcgcgtctt
      781 tatcgtaaac ggtcaggacg aaactttttg tcccggcggg cggatttttc cacgacagcg
      841 cgggcgaagc attgccgccc gaacagccaa atccgtaagg cgcgctcaaa agctggtttt
      901 gcgtgaagcc gccgtcttcg gacgggttgt cgaattgcag cgtgaatgcg cccccggcaa
      961 aggcagcggt tgaaaaagcc agcagtacgg cggagagaat gcgggtttgc atagatgatt
     1021 cctttgcttg atgaataagt ggattcatta taggctgtca acggcggcag gaatgtgccg
     1081 aaacggttgg atgatgtgcc agaatgcgca aatgcaaaaa tcgtggtttc agacgagcct
     1141 ttgcaggtcg tctgaagtct ttaattcctt tccctgaggc tttggaaata tcgcatattt
     1201 aggcattgcc gcaacctaac cctcaagatt tacgtcgtag cccgttcctg catcagcgtg
     1261 cgggaatggc gaaaattggg aattttgccg tcaaatccat gatagagata cggagcaaac
     1321 gaatgattac cctgccttcc ttaaacaatc tgccgtcaaa atgggatgaa atccgctatt
     1381 ggctcgaaac ccgggtttgt gagtgcggcg ttatgccgca tcccaatttg acggaatgcg
     1441 aagccgggca gttcgatcgg gatttttggg acaatatcgg ctgcgcgcct gaagaatatg
     1501 tccgtatccg ccgagccatc cgtctgttgg aagcgcgtta tcccgacagt ttgaatgagc
     1561 tggtgtgtgc cgccattgcc acgcctttgg gcgagatgct ggcggtgttc ggaaataagg
     1621 gattgtgtct gctggagttt gtcggacaga agcatttgga acaggaaatt gccgccgtcc
     1681 aaaaagcctt gcgcggacgg tttgtgtttc gggaggatga gcggacgcaa cttttgcggc
     1741 aggaattgga cttatacttc aagggtcgtc tgaaaacctt tgccacgcct ttggagcaga
     1801 ttggcaccga gtttcaaaag caggcatggg acgcgctctt ggcgattcct tacggcgaaa
     1861 cgcgcagcta caaggagcag gcgcagcgtt tgggcaaccc caaagccgtc cgcgccgttg
     1921 ccgccgccaa cgggcagaac aaggtgtctg tcctgattcc ctgccaccgc gtcatcggca
     1981 gcgacggcaa actgaccggc tacgcgggcg ggttgaaccg caaacagttt ttactggctt
     2041 tggaacgcgg cgaagttcag acggcattgt tttaagcggg ggagggcaga acggctcatc
     2101 gggcttaaat atggtgtgat gacggctgtg gaaattcata caacggcaat ccttttaagg
     2161 catcggtctt aatgtctttc tgattcatat gcttgtcgtt ttgtcgccca tttttccaaa
     2221 attaaggatt gacacatttt ttccggacgc tataatacgc cccattcccc gatagctcag
     2281 tcggtagagc gacggactgt taatccgcag gtccctggtt cgagcccagg tcggggagcc
     2341 agaattttga agcccgaact tgaatgttcg ggctttttca tatttgcacg tacggcgttc
     2401 ggaatgcggc aagataggtt ttccaacggt ttcgcggtaa aattctgcct gtctgatttc
     2461 ggtttcttgt tatgtccatc aaaatcctga ttatttctcc cagttggata ggcgactgcg
     2521 tgatgaccca gcccttgttc cgccgtttga aggaacttca ccccggttgc acgattgatg
     2581 tgttcgcacc gaagtggtcg atggcggtgt ttgagcgtat gccggaagtg aatgagattc
     2641 ttgaaaatcc gttcggacac ggtgcgttgg agttgaaacg ccgctggcgg gtcggcaggg
     2701 atttggggcg gcgcggatac gatcaggtta tcgtgttgcc cggttctttg aaatcggcag
     2761 tcatcgcgct agcaacgggt attgccaaaa ggacgggtta tgtcggtgaa agccgttatt
     2821 ttctgttgaa cgatatacgc aggctggata aggaacgtct gcctttgatg gtggacagat
     2881 atacggctct cgcgcatccg agtcaggaag attttgacgg gcattcggga ttccccgagt
     2941 tttccattga tgaacggcgg cgggaaattt ctgtcgaaac tttcggtttg aatcttggaa
     3001 agcctgtttt ggcattttgc ccgggcgcgg aattcgggcc ggcaaagcgt tggccgacaa
     3061 ggcattttgc cgagttgggc aaacattatc tggcggcggg ttggcaggtt tggctgttcg
     3121 gttcgcaaaa agatgatgaa attgccgagg aaatcaactg cctttcagac ggtatgtgtg
     3181 tgaatttatg cggaaagacc gatttgtcgc aggcaatgga tttgctgtcg ttggcggaca
     3241 cggtcgtgtg caacgacagc gggctgatgc acttggcggc ggcattgggc aggaaggtgg
     3301 tggcggttta cggttcttcc agcccgacac acacgccgcc tttgagcgat aaggcaaaaa
     3361 tcgtcagcct ccatttggaa tgttccccgt gttttaagcg ggaatgtccg ctagggcata
     3421 cagactgcct caacaagctg tatcccgaga agattgtgca ggcggttgaa gaggcggtat
     3481 gatgggttct gttttcgggt ttatgccgtc tgacggcgga tattgatagg atgtttatgg
     3541 ctattgcgaa caataaaaaa gcatttcacg attttttcat tgaagaccgg attgaagccg
     3601 gtttggtctt ggaaggctgg gaagtcaaag caatccgcgc cgcgcgcgta cagcttaaag
     3661 agagttatat ctattggaaa aaagacgcgt tttatctggt cggctgccat attacggctt
     3721 tgcccacagc ctcgacacac attaaaccag atgccgtacg tccgcgcaag ctcttgttga
     3781 accagtcgga aatcaacaaa ttaatcggca aaaccgaacg tgccggctac accatcgtgc
     3841 cgctggattt gcatttttcg cgcggaaaaa tcaagatgga aatcggtttg gcaaaaggta
     3901 agaaacagca cgacaaacgt cagagtatga aagaggcgga ttggaaacgc gagaaacagc
     3961 ggttgattaa gcatacgcgc tgattgtgga aacagtgctt cagacggtat gggcaaggct
     4021 gccgcctgat gtgtaaacgt tctacaccta aaccagaatc cgctttaatc agcacagcat
     4081 gatgccccaa accttcatca aaggtttgag caatttgatg ataaattggc attagccaag
     4141 ggtaaagtgc ggtcattttt cctgaaattt ttgtaaataa cgagggcaat tatacacatt
     4201 ttcaaactgg cttgacaaaa tagcaaaaag caaacgttta cctttaataa ataagaaata
     4261 aatagagaaa aatgtgagct aaatgacatt ttttgttcag ttttatgcta aaatccacgc
     4321 cccatttatt tttacttgac aaaggaaaat ttattatgaa actcgaagca agcaagcaag
     4381 caagcagaag tttaaaaaat catttattat aagtctattt ttttctattc tttatacctc
     4441 tccgcttttg gctgttgatt acgtttacga caattctaaa ttaacaaatg agcaaattga
     4501 tcgcttaaaa aaacttagag ataaaagcag cgaatactgg aaacaagaaa cttatcttct
     4561 aaaaccgacg aatggtagct ctcagaactc tctcaaagtt cccgcactat actctaaaac
     4621 acaccaattc aaaaacatca acaactcaaa aaagatttct ttttatgaca aggaatacac
     4681 tgaagattac cttgttggct tcgcccgagg tttcggggtt gaaaaaagaa atggggaaga
     4741 agaaaaaaca ctccagcaat attttaagga ctgtgtaaat actgggaatt ccaataatga
     4801 taagtgtgaa caaccatcct tcgaaaactc tggcccaaga ttaataaaga gcgatatttt
     4861 cgccttagct ccacaaataa aaaatagcca tatcaacagc gaaattttat ctgtaggtaa
     4921 ttatatcgaa tggcttcgcc caacacttaa taagcttcct agttggcaag agcatctcta
     4981 ttctggttta gatccattcc actatattga ggttacagac aactcacacg ttatcggaca
     5041 aacaattagt ttggatgaat tccgcttaga aaattctctc tgggaacccc gttgggattc
     5101 tgatgttggg gaattaaaaa caacgaatgc agacatccgt tttaatacta aaagtgaaag
     5161 tttactcgta aaagaagatt atgctggcgg agctcgtttt cgttttgctt acgatctaaa
     5221 agataaagtc tctgaaacac cagttttaac ttttgaaaaa aatataactg gcacttccga
     5281 catcatcttc gaaaatccaa tagacgattt aaaaagtctc gacgggcatc aaattatcaa
     5341 agtaaatggc acagcagata aacacgcatt ccgtctttct ggcaaacacc aaaagggaat
     5401 ttatacgctt tctttacaac aacgcccaga aggctttttt accaaagtgc aagaacgcga
     5461 tgatatttcg atttatgcac aacaggctca agccgccaat accttattcg ccttgcgttt
     5521 gaacgacaaa aacagcgata tttttgaccg cactttacca cgcaaaggct tgtggttgcg
     5581 tgtgattgac ggacattcca accaatgggt gcaaggcaaa acagcacctg tagaaggcta
     5641 tcgtaaaggt gtgcaactcg gtggcgaagt attcacatgg caaaacgaaa gtaatcaact
     5701 ttccgttggc ttaatgagcg gacaagcaga acaacgcagc actttccgca atccagatac
     5761 agacaatctt acaacgggaa atgtgaaagg ctttggggcg ggcatttatg ccacttggca
     5821 tcagcttcag gacaaacaga caggtgcgta tgcggatagc tgggtacaat atcaacgctt
     5881 ccgccaccgc attaacactg aagatgctac agaacgtttt acttcaaaag gtattaccgc
     5941 ctcaattgaa gcgggttaca atgctttatt ggcagaacac ttcactaaaa agggcaacag
     6001 ccttcgtgtt tacctacaac cacaggcaca attgacttat ttgggggtaa acggaaaatt
     6061 cagcgatagc gaaaatgccc acgtgaattt acttggctcc cgccaattac aaactcgggt
     6121 tggcgttcaa gctaaagctc aattttcact ctataaaaat atcgctattg aacctttcgc
     6181 cgctgtgaac gcgctttacc acaacaaacc tttcggtgtg gaaatagacg gagagcgtcg
     6241 agtgataaac aataagacgg caattgagag ccaattaggt gtagcagtga aaatcaaatc
     6301 tcacttaact ttacaagcct cattcaaccg ccaaacaagc aaatatcatc aggctaaaca
     6361 aggtgcgttg aatttgcagt ggacgtttta agttaagttg taacaaaata aaatcggcag
     6421 ggaaattcac tgccgatttt tttattttaa aaatgcggtc atttttcgtg tcatttccac
     6481 caatttttta ccgcactcac gagctcgcgc taaaccgaca atcggatcta ttgtcccttt
     6541 ctttgttgtg tatgcaaatc agaaatgccg gttacggaag cagtttgccc ggattcataa
     6601 tgttatatgg atcaaggtgt tgtttgatgc ttttcatcag ggcgatttcg gcaggcgtgc
     6661 gtactttgtc cagccactgt tttttgatga tacctatgcc gtgttcggcg gcaatcgtgc
     6721 cgttgcaggc aagaacgttg cgataaactg cgtcgttgat gtcgttttcg taacgataga
     6781 cttcattgct gaggatttcg ggcaggaaag tattgtagtg caggctgccg tcgccaagat
     6841 gtccgaagca gacgatttgt atgcctttaa aattctgttc caaatctttg gcgcaccggc
     6901 ggacaaagtc ggcaacgcgt ccgataggaa tggcaatatc gtgtttgatg ctggtgccca
     6961 gtttgcgttg cgatgcggag atgttttcgc gcaatgccca catatggata cgttcttgtt
     7021 cgctttgtgc caatacgctg tcggtaaatc cttttttata aagaaattcg acaagccgat
     7081 catcaagatt gctgtcgggt aatgagtcgg tcaactcaag taaaatatgc cattctgaat
     7141 gtgtcggcag ggggaatttg ctgaattcgg aagacaactc ggcggcaaaa cggccgacca
     7201 gttcaaaact gcataggcgt tcggcaaagt gagcttgggt ttcggtcagc aggcggacgg
     7261 cggattcgat gtcgggtatg ccgacccatg ccgttgcctt gtccgaggga cgggcaaaaa
     7321 gcttgagtgt ggcggcagtg atgatgccca gtgtgccttc gctgccgata aacagatggc
     7381 gcaggtcgta gccggtggtg tttttatgca ggggatggag atgggaaacc agctcgccgt
     7441 tggggaggac gacttccaaa ccgataatca ggtcgcgcat cgtgccgtaa cgcaatacgt
     7501 tcaaacctcc ggcattgcag gcgatgttgc cgccgatttg acaggagcct tcgctggcga
     7561 gactgagtgg gaacagcctg tttgaggctt cggctgcctg ttggacggtt tggagtacgg
     7621 aacctgcttc gacggttatg cagttgtctg acaaattgat gctgcggatg cggttgagtt
     7681 tggaaaggtt cagcaatacg ccgttttccg atactgccgc gccgcacaaa ccggtattgc
     7741 cgccttgcgg cgtaaccgga atacggtgtt cgtaacaaaa acgcataatg gtttgcacgc
     7801 tttcaacgct gcgcggctgc aaaatgatgt ctggtgcaga cgtaaagcgg ttgcgctggt
     7861 cttttaaaag cgtcggagaa agttcggcaa tttcatctgc cggcaggagt cgggaaaatt
     7921 cggtatgaag gtcaggcatg tttgtcggaa gggtagggag aagattgagg aagggaatct
     7981 gatgccgtct gaaaaatcaa aaaagcagga tactgaacgt atcctgcttt tttgcaagcg
     8041 gaaaatgctt attttgcagc ttcggcagca ggagcttcag cggcaggtgc ttcggtagcg
     8101 gcagcttcag cagcgggagc ttcggcggca ggtgcttcag tagcggcagc ttcagcagcg
     8161 ggagcttcgg cggcaggtgc ttcggtagcg ggagcttcgg cggcaggtgc ttcagtagcg
     8221 ggagcttcag cggcaggtgc ttcggtagcg ggagcttcag cggctttttc accgccgcag
     8281 gctgccagga ccaaagacaa caaagcagcg gcaaacaggg attttttcat tttagtaacc
     8341 tttagaacca atttaaatta ttgaaacaaa taggtctttt atcgaccata ctacaaaccg
     8401 ggttggaaat tcatcgctga atttgcgtaa ttatgcacta tggaataagg gattgcaatg
     8461 tcgtacagat gggaaaaagg tttgaatgaa aagttttctg gcgggcggat tgataaatcc
     8521 tgtaaaacgg ttttgctgtt aaaaattcga tagggataaa tattatagag attaatataa
     8581 tttcagtatc ttgtatgatt tattaaggcg gattgggaaa gtcggcagac aggtcggaat
     8641 ggttttaaga atgttgtaaa aaagttacac cgcaataaaa taacaaaaat ttacattgaa
     8701 atatgtgctg tacagtttat gaacaggtta acggtaatcg gccggcgcgg cggttgtgtt
     8761 agaatgcgcc tgtaatcaat ctgctgttcc tgaaaggaca aatatggcta tcgtgaaaaa
     8821 ttccgtggtt tcgctgcatt atgagatgta tgatgccaac aatcagcttt tggacaaaac
     8881 cgaagaaccg attgcgtatc tgcacggcgg ttacgacggc attttccctt tggtggaaga
     8941 ggcgttgcac ggtaaggatg ccggcgatac ggtcgatgtg gcgctgtcgc ccgacgatgc
     9001 gttcggcgag caggatccgg agttggtccg tattgaagat gcgggcgtgt tccctgttga
     9061 agtcgaagtc ggcatgatgt ttgaagccga cgatcctgaa accggcgatg ttgtcgtcta
     9121 tcgtgtaacc gatgttgccg acggcaaggc ggtggtggac ggcaaccatc ctttggcagg
     9181 catgaaaatc cgctttaagg ctacggttga aagtgtgcgc gatgcatccg atgaggaaat
     9241 cgcacacggt catgtccacg gtccgcacgg tcatcaccac cactgattgc cggcagcttg
     9301 gaggtatctg atgccgtctg aaaagggttt gttccatttc agacggcatt ttgtttgatg
     9361 gatggagaag gtatgtcggt tgggcattat gaaaattttc ccgtcggttc gctgattttg
     9421 ccgcgcaggt tgaggaagcc ggttcacgcg gtgtacgcgt ttgcacggac ggcggacgat
     9481 atggcggacg agggcagtat gccgtctgaa gccaggttgg cggggttgga gggtttgcgg
     9541 cgcgagttgg acgtgttggc atcgggcggc cggtcggcgc atcctttgat tgcacgattg
     9601 gatgccgagg cggttgtgcc gttcggtttg gatttgcagc cgttttatga tttgctttct
     9661 gcattttctc aggatgtggt taaaacaagg tatggaaatt tcggcgagct ggccgattat
     9721 tgccgacgtt ctgccaatcc tgtcggacgc attatgctgg ctttgtacgg gaaaacggat
     9781 gcggtgtgcg tggcgcaaag cgacggcatc tgtacggctt tgcaactggt gaatttttgg
     9841 caggatgtgg ctgtggattg gcaaaagggc agggtttata ttccgcagga cgatttgttg
     9901 aaattcggtg tttccgaagg acagattgcg gagggtaggg cggatgcggc gtttcagcgg
     9961 ctgatggcgt atgagtgccg gcgcgcattt cgtatgctga aggcgggttc gcctttagcg
    10021 cgcgaattga aagggcgtat cggtttggaa ctccgtatga ttgtgttagg ggcgcagttg
    10081 attttgcaga aactggacgc gtgccgatac gatgtgtttg cacaacgccc cgttttggat
    10141 aagaaggatt ggttgattat gctgaaacgc gcgttgtgga aatgatgggg gaaatgcatg
    10201 ccgtctgaaa ggggttgttc cgcttcagac ggcattttgc aggcggttgg tatggtcagg
    10261 cgatttcatg tgggttcaac ctggcttgat cttctgcacc caagccgatg agtttgcgca
    10321 gtcgggtcat gtagaaattg acatccaaac cggtgccgta gcgttgcgcc gtccacagtg
    10381 tttccgccag tgcctccatc atttcgtgtt cggcttccag ccagccgcgt ttggcgcaca
    10441 gggtgtcgtg gattgcgcgt atgccgtgcg gctggtctat gcccgcctgt tcttggacgg
    10501 acagatgcag cgacatatgc aggaaggggt tgctttcgcc gttttcgggc agccagtcgg
    10561 tgtccagatg gtcttcgatg cgttcgagat agcggtggta ttcgggatgg gcttcgacaa
    10621 tgcggagggc tttctgttcc agtgcgctca gttgcagcgg attgagccgc tgctgccaca
    10681 cgcgggcgaa aaagcggcgg acatcgtggg tattgacatc gtacatggcg ggttcgataa
    10741 gatggttatg gaaataggtt cggataatgg cgggttttac ataaattaaa tcccaccgtc
    10801 aaccttacca tttataatgc agacaaatta tttgtctgaa acggattcga ttatgaaaaa
    10861 actgatttgc ctgttcgccg tatttttgat gttgtgcgga cgagctttcg cgctggatgc
    10921 gaacgatctg ctgccgccgg aaaaggcatt cgtgccggag cttgccgttg ccgacgacgg
    10981 tgtgaacgtc cgtttcaaga ttgccgacgg atactatatg tatcaggcga aaatcgtcgg
    11041 caagaccgat ccggcggatt tgttgggaca gccttctttc agcaagggcg aagagaagga
    11101 agacgagttt ttcggcaggc agacggttta ccatcacgaa gcgcaggttg cctttcctta
    11161 tgcaaaggct gtcggcgaac cgtataaatt ggttttgacc tatcagggct gtgccgaagc
    11221 cggcgtgtgc tatccgcccg tggataccga gtttgatatt tccggcaacg gcacttacca
    11281 tccgcaaacc gacgaaccgg catccgccaa agaccgcttt ttgcagcctt cctctcaaaa
    11341 cggcagcggg gcgctgccgc ccccgaaggg ggatgagggc ggcgacagcc gtttcaagct
    11401 gtcttgggat acgctcaacg ccaatctttt ggcgtttttt ctcgccggtt tgggtctgag
    11461 ttttaccgcc tgtatgtatc ccctgttgcc gattgtttcc agtattgtgg tcggcgacaa
    11521 aaaggcgggc aaggcgcggg cgtttgtgct gtccgtcgtt tatgttcagg gtttggctct
    11581 gacttatacg ctggtcggca ttgttgccgg actgacgggc gcactgctga ccgtatggtt
    11641 gcagcaggct tgggtcgtgt tggcggcatc ggctttgatg gtcgtcttgg cactgtctat
    11701 gttcgggctg ttcaacatcc agcttcccaa cgccgtgcag tcgtattttc agaatcaaag
    11761 cagcaggctt tcaggcggta aaatcgtttc cgtctttatt atgggcatat tgtccgcgct
    11821 gattgtcggg ccgtgcgtcg ccccgccgct ggcatttgct ttgggctaca tcggtcagac
    11881 gggcgatgcg gttttaggcg gtttggcact ttacactttg gcgttgggca ccggcgttcc
    11941 gctgattgcc atcggcacgt tcggcgggca tatcctgcct aaggcaggcg attggatgaa
    12001 tgccgtcaaa tacgctttcg gctttatcct gcttgccgtc gccgtttacc tcgccacgcc
    12061 gcacttgccc tattatctcg tcgtcgcgct gtacacgctg ctgatgctgg ttcctgcctg
    12121 tatgctgctg gtcaacggac gcaggcagaa acgccgtccg aaagctgtgg cattcgcatt
    12181 gggcagcata ttgctgatag gcggcgcgtg gttcggctgg cagggcgcaa acggcaaaac
    12241 gaccgcgctg caccatttcc tgaccctcaa tccgccggcc gaagcaggca aatcttcgga
    12301 acacggcaaa atgtttgccg atactgccgc gctgaaggca gcgatggata cggcgttgaa
    12361 agaacatccc gacaaacccg tcgttttgga tttttatgcc gactggtgca tttcctgcaa
    12421 agaaatggcg gcttacacgc tcaatcagcc ggaagtgcat caggcagtcg atatggaacg
    12481 ctttttccaa atcgacgtaa ccgccaacac gcccgaacat caggcgttgt tgaaagaata
    12541 cggtctgttc gggccgccgg gcgtgtttgt cgtccgctcc gacggcagcc gcagcgagcc
    12601 gctgctgggt tttgtcaaag cagacaagtt tatcgagtgg tatgaacaaa accgctgatt
    12661 ccgatgtttc aaatgccgtc tgaagttctc agacggcatt tttgtcagaa aggaaaacgg
    12721 caatatccgc tatacacacg gaagcagtcc aaagatgtga aaaccgtgtg tataagttag
    12781 tttgcgtatt gaaattaaaa gataaaaata cgatgattaa aaaataggca taagaaaaga
    12841 taaacacagc cggtgtttgc cggtgtgtgt atcttttgtg gaaaaacatc ttaatgtcat
    12901 gtattttatg gaaaataata acatgattaa aaaatagtca atcattaagg ttcaggtggg
    12961 cggctgcaac cgtcaatgtc tgaaaagagg cagtgctgtt taagtatgga aagtcggata
    13021 tagtggatta acaaaaatca ggacaaggcg acgaagccgc agacagtaca aatagtacgg
    13081 aaccgatt
//
LOCUS       DAWITQ010000042        12957 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.042, whole genome shotgun sequence.
ACCESSION   DAWITQ010000042 DAWITQ010000000
VERSION     DAWITQ010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12957)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12957)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12957
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.042"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            109..933
                     /locus_tag="WIX18_000942"
     CDS             109..933
                     /locus_tag="WIX18_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238071.1"
                     /translation="MNRTAFCCLSLTAALILTACSSGGGGVAADIGAGLADALTAPLD
                     HKDKSLQSLTLDQSVRKNEKLKLAAQGAEKTYGNGDSLNTGKLKNDKVSRFDFIRQIE
                     VDGQLITLESGEFQVYKQSHSALTALQTEQVQDSEHSGKMVAKRQFRIGDIAGEHTSF
                     DKLPEGGRATYRGTAFGSDDASGKLTYTIDFAAKQGHGKIEHLKSPELNVDLAASDIK
                     PDKKRHAVISGSVLYNQAEKGSYSLGIFGGQAQEVAGSAEVETANGIRHIGLAAKQ"
     gene            1072..1749
                     /gene="tsaB"
                     /locus_tag="WIX18_000943"
     CDS             1072..1749
                     /gene="tsaB"
                     /locus_tag="WIX18_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HEZ5238072.1"
                     /translation="MQADFNRPVLAVDTGTSYLSLALRADGETRLFHQEVGSRQSALI
                     LPEIRTLFRNAGITAADLGAIVYAKGPGAFTGLRIGIGVAQGLATPFDTPLIGIPTLD
                     AAASLPPPQSCILAAADARMGEVFYAWFDTLNRRRLSDYQVGRAADIRLPEGCAFSDG
                     IGSAFALEETPPFSGKPDMPTAADFLNLAAEGGFPAVAAAHAELLYVRNKIALTAKEQ
                     AERRARL"
     gene            1746..2186
                     /gene="rimI"
                     /locus_tag="WIX18_000944"
     CDS             1746..2186
                     /gene="rimI"
                     /locus_tag="WIX18_000944"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HEZ5238073.1"
                     /translation="MNIRRAVYADCAALAALDAVCNPSAWTQRQFESALVSLSEQVFL
                     AEKDGGLAAFIVWQNLPDESELHLIATAPECRRQGIASALLEYWFAHLPEGTQRLLLE
                     VRAGNTAAQALYAAHGFSIAGRRKNYYRATDGQTEDAVLMEKIC"
     gene            2180..2914
                     /locus_tag="WIX18_000945"
     CDS             2180..2914
                     /locus_tag="WIX18_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HEZ5238074.1"
                     /translation="MLSARYLHLHEALGLGPMWLKQAAAVLPPKNTPATPAQARPQTV
                     RAAPIRPSQPHNGQARLETMKALETAAVPTRKPAPETETPLPGLSDGIAPVPAASGIT
                     KLAVVSLCPPIEDAVYGQLFHGKAGVLLDNILKAVGLDAAYVHKTSWVKTAAVGNPMP
                     SEQAVANALGQIARELDGCRAPAVLFLGQAFVQPERQTMIETLCGSRPFFIIDHPARL
                     LRQPELKARNWQVLKQLKHALQAGGS"
     gene            2976..3617
                     /gene="pyrE"
                     /locus_tag="WIX18_000946"
     CDS             2976..3617
                     /gene="pyrE"
                     /locus_tag="WIX18_000946"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HEZ5238075.1"
                     /translation="MTDFRQDFLKFSLAQNVLKFGEFTTKAGRRSPYFFNAGLFNDGL
                     STLQLAKFYAQSIIESGIRFDMLFGPAYKGIILAAATAMMLAEKGVNVPFAYNRKEAK
                     DHGEGGVLVGAPLKGRVLIIDDVISAGTSVRESIKLIEAEGATPAGVAIALDRMEKGT
                     GELSAVQEVEKQYGLPVAPIASLNDLFILLQNNPEFGQFLEPVRAYRRQYGVE"
     gene            3691..4125
                     /locus_tag="WIX18_000947"
     CDS             3691..4125
                     /locus_tag="WIX18_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238076.1"
                     /translation="MPACFCPHCKTRLWVKETQLNVAQGFVVCQKCEGLFKAKDHLAS
                     TKEPIFNDLPEAVSDVKLVHRIGTRAIGKKQISRDEIAGILNGGTTLHDTPPATAATP
                     AAAPQVAVPPAAPARQEGFNWTIATLFALIVLIMQLSYLVIL"
     gene            4122..5432
                     /gene="argA"
                     /locus_tag="WIX18_000948"
     CDS             4122..5432
                     /gene="argA"
                     /locus_tag="WIX18_000948"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HEZ5238077.1"
                     /translation="MIVPDLFVAHFREAVPYIRQMRGKTLVAGIDDRLLEGDTLNKLA
                     ADIGLLSQLGIRLVLIHGARHFLDRHAAAQGRTPHYCRGLRVTDETSLEQAQQFAGTV
                     RSRFEAALCGSVSGFARAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRF
                     QLDAGNIVWLPPLGHSYSGKTFYLDMLQTAASVAVSLQAEKLVYLTLSDGISRPDGTL
                     AETLSAQEAQSLAEHAGGETRRLISSTVAALEGGVHRVQILNGASDGSLLQELFTRNG
                     IGTSIAKEAFVSIRQAHSGDIPHIAALIRPLEEQGILLHRSREYLENHISEFSILEHD
                     GNLYGCAALKTFAEADCGEISCLAVSPQAQDGGYGERLLAHIIDKARSMGISRLFALS
                     TNTGEWFAERGFQTASEDELPETRRKDYRSNGRNSHILVRRLHR"
     gene            5528..7543
                     /locus_tag="WIX18_000949"
     CDS             5528..7543
                     /locus_tag="WIX18_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEZ5238078.1"
                     /translation="MKSYPDPYRHFENLDSAETQNFAAEANAETRARFLNNDKARALS
                     DGILNQMQDTRQIPFCQEHRARMYHFHQDAEYPKGVYRVCTAATYRSGYPEWKILFSV
                     ADFDELLGDDVYLGGVSHLVEKPNRALLTLSKSGGDTAYTLEVDLEAGELVEGGFHFP
                     AGKNQVSWRDENSVWVCPAWDERQLTESGYPREVWLVERGKSFEESLPVYQIDKDAMM
                     VNAWRYLDPQGSPIDLIEASDGFYTKTYLQVSAEGEAKPLNLPNDCDVVGYLAGHLLL
                     TLRKDWNRANQSYPSGALVAVKLNRGELGAAQLLFAPDETQALESVETTKRFVVASLL
                     ENVQGRLKAWRFADGKWQEVELPRLPSGALEMTDQPWGGDVVYLAAGDFTTPLTLFAL
                     DLNVMELTVMRRQPQQFDSDGIEVRQFWVMSSDGERIPYFHVGKNAAPDTPTLVYAYG
                     GFGVPELPHYLGSIGKYWLEEGNAFVLANIRGGGEFGPRWHQAAQGISKHKSVDDLLA
                     VVRDLSERGISSPQHIGLQGGSNGGLITAAAFVREPQSIGALVCEVPLTDMIRYPLLS
                     AGSSWTDEYGNPQKYEVCKRRLGELSPYHNLSDGIDYPPALITTSLSDDRVHPAHALK
                     FYAKLRETSPQSWLYSPDGGGHTGNGTQREAADELACVLLFLKEFLG"
     gene            complement(7657..8613)
                     /locus_tag="WIX18_000950"
     CDS             complement(7657..8613)
                     /locus_tag="WIX18_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ5238079.1"
                     /translation="MNTAAIYRQYQTYVRSDKSGWALDGCSDSALIAQAKQPGLHLEM
                     CINRFDSGITLSRMRGGGTGAFPTEIHNFSHNCALFVMVSGQNRLQMGGREYRPSAGE
                     IWLVRGELADVSETLLPDNSGMCALHLDFSLEKLRRWHDEGLLDERLFSPQTIGRFAL
                     QRLAQNAAALTAAACPLLQRPFESDGFGLLADEAAALELSARLLRFTFRRHDNGYRRR
                     RIDEAADILQHEFARPLTIAEIARRVGLNECYLKRYFKAQTGETVAGCLRRLRLEHAL
                     ALIESGSTVQAAMHFCGYRHAGRFNEAFRRHYGFLPSDVKKC"
     gene            8849..9814
                     /locus_tag="WIX18_000951"
     CDS             8849..9814
                     /locus_tag="WIX18_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ5238080.1"
                     /translation="MKPRFYWAACAVLLTACSPEPAAEKTVSAASASAATLTVPTARG
                     DAVVPKNPERVAVYDWAALDTLTELGVNVGATTAPVRVDYLQPAFDKAATVGTLFEPD
                     YEALHRYNPQLVITGGPGAEAYEQLAKNATTIDLTVDNGNIRTSGEKQMETLARIFGK
                     EARAAELKAQIDALFAQTREAAKGKGRGLVLSVTGNKVSAFGTQSRLASWIHGDIGLP
                     PVDESLRNEGHGQPVSFEYIKEKNPDWIFIIDRTAAIGQAGPAAVEVLDNALVRGTNA
                     WKRKQIIVMPAANYIVAGGSRQLIQAAEQLKEAFEKAEPVAAGKE"
     gene            10315..10638
                     /locus_tag="WIX18_000952"
     CDS             10315..10638
                     /locus_tag="WIX18_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003775941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEZ5238081.1"
                     /translation="MQNETINLKQHLAAIKEYWQPEIINRHGFQFRLVKLLGDYGWHT
                     HGYSDKVLFAVEGDMAVDFADGGSMTIREGEMAVVPKSVSHRPRSENGCSLVLIELSD
                     PSEAV"
     gene            10752..12929
                     /locus_tag="WIX18_000953"
     CDS             10752..12929
                     /locus_tag="WIX18_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HEZ5238082.1"
                     /translation="MTRFKYSLLFAALLPVYAQADVSVSDDPKPQESTELPTITVTAD
                     RTASSNDGYTVSGTHTPLGLPMTLREIPQSVSVITSQQMRDQNIKTLDRALLQATGTS
                     RQIYGSDRAGYNYLFARGSRIANYQINGIPVADALADTGNANTAAYERVEVVRGVAGL
                     LDGTGEPSATVNLVRKRPTRKPLFEVRAEAGNRKHFGLGADVSGSLNAEGTLRGRLVS
                     TFGRGDSWRQRERSRDAELYGILEYDIAPQTRVHAGMDYQQAKETADAPLSYAVYDSQ
                     GYATAFGPKDNPATNWANSRHRALNLFAGIEHRFNQDWKLKAEYDYTRSRFRQPYGVA
                     GVLSIDHNTAATDLIPGYWHADPRTHSASVSLIGKYRLFGREHDLIAGINGYKYASNK
                     YGERSIIPNAIPNAYEFSRTGAYPQPSSFAQTIPQYGTRRQIGGYLATRFRAADNLSL
                     ILGGRYSRYRTGSYDSRTQGMTYVSANRFTPYTGIVFDLTGNLSLYGSYSSLFVPQSQ
                     KDEHGSYLKPVTGNNLEAGIKGEWLEGRLNASAAVYRARKNNLATAAGRDPSGNTYYR
                     AANQAKTHGWEIEVGGRITPEWQIQAGYSQSKTRDQDGSRLNPDSVPERSFKLFTAYH
                     FAPEAPSGWTIGAGVRWQSETHTDPATLRIPNPAAKARAADNSRQKAYAVADIMARYR
                     FNPRAELSLNVDNLFNKHYRTQPDRHSYGALRTVNAAFTYRFK"
BASE COUNT         2908 a         4059 c         3591 g         2399 t
ORIGIN      
        1 aggcaattga aaattttttg gcgcattttt atgcgtcaaa tttcgttaac agactatttt
       61 tgcaaaggtc tcatattatc tattctgcgt atgactagga gcaaacctgt gaaccgaact
      121 gccttctgct gcctttcttt gaccgccgcc ctgattctga ccgcctgcag cagcggaggc
      181 ggcggtgtcg ccgccgacat cggcgcgggg cttgccgatg cactaaccgc accgctcgac
      241 cataaagaca aaagtttgca gtctttgacg ctggatcagt ccgtcaggaa aaacgagaaa
      301 ctgaagctgg cggcacaagg tgcggaaaaa acttatggaa acggcgacag cctcaatacg
      361 ggcaaattga agaacgacaa ggtcagccgc ttcgacttta tccgtcaaat cgaagtggac
      421 gggcagctca ttaccttgga gagcggagag ttccaagtgt acaaacaaag ccattccgcc
      481 ttaaccgccc ttcagaccga gcaagtacaa gattcggagc attcagggaa gatggttgcg
      541 aaacgccagt tcagaatcgg cgatatagcg ggtgaacata catcttttga caaacttccc
      601 gaaggcggca gggcgacata tcgcgggacg gcattcggtt cagacgatgc cagtggaaaa
      661 ctgacctaca ccatagattt cgccgccaag cagggacacg gcaaaatcga acatttgaaa
      721 tcgccagaac tcaatgttga cctggccgcc tccgatatca agccggataa aaaacgccat
      781 gccgtcatca gcggttccgt cctttacaac caagccgaga aaggcagtta ctctctaggc
      841 atctttggcg ggcaagccca ggaagttgcc ggcagcgcag aagtggaaac cgcaaacggc
      901 atacgccata tcggtcttgc cgccaagcag taaccattgt gaaaatgccg tccgaacaca
      961 ataatttacc gttcggacgg catttttgcg ccataccgcc ctaggacacg acggcacggc
     1021 aggcaagccg atttcactat ataatgccgt ctgaaccaac gagagaatgc catgcaagct
     1081 gatttcaacc gccccgtcct cgccgtcgat accggaactt cctatttgtc gctcgcgctg
     1141 cgcgccgacg gcgaaacccg tctgttccat caggaagtcg gcagccgcca gtccgcactg
     1201 atcctgccgg aaatccgcac cctattccga aatgcaggca ttaccgccgc cgatttgggg
     1261 gcgattgttt atgcgaaagg ccccggcgcg tttacgggac tgcgtatcgg tatcggcgtg
     1321 gcgcaaggtt tggcaacgcc gtttgatacg cctttaatcg gcatccccac gctcgatgcc
     1381 gccgcctcgc tgccgccgcc gcaaagctgc atactcgccg ctgcggacgc gcgtatgggc
     1441 gaagtgtttt atgcgtggtt cgacacgctg aaccgccgcc gtttgagcga ttatcaggtc
     1501 gggcgggcgg cagacatccg gctgccggag ggatgtgcct tttcagacgg cataggcagc
     1561 gcgttcgcgt tggaagaaac gccgccgttt tcaggcaaac ccgatatgcc gaccgccgcc
     1621 gacttcctca atctggcggc tgaaggcggt tttcccgccg tcgctgcggc acacgccgag
     1681 ctgctctacg tccgcaacaa aatcgccctg actgccaaag aacaggcgga acggagggcg
     1741 cgcctgtgaa catccgccgc gccgtttatg ccgattgcgc ggcactcgcc gcactcgatg
     1801 ccgtctgcaa cccgtccgcg tggacgcaac gccaatttga gtctgcattg gtttcgctgt
     1861 ccgaacaggt tttcctcgcg gaaaaagacg gcgggttggc cgcctttatc gtttggcaga
     1921 acctgcccga cgaatccgaa ctgcacctga ttgccaccgc gcccgaatgc cgccgccaag
     1981 gaattgcgtc cgccctgctc gaatattggt tcgcacatct gcccgaaggc acgcaacgcc
     2041 tgctgctcga agtccgcgca ggcaacaccg ccgcgcaggc actgtacgcg gcgcacggct
     2101 tcagcattgc gggcaggcgg aaaaactatt accgcgccac cgacgggcaa accgaagatg
     2161 ccgtcttaat ggagaaaata tgttaagcgc gcgctacctc cacctgcacg aagctttggg
     2221 tttgggtccg atgtggctga aacaggccgc tgccgtcctg ccgcccaaaa acacacccgc
     2281 aaccccggca caggcacgtc ctcaaaccgt ccgcgccgcc ccgatccgcc cttcccaacc
     2341 ccataacggt caggcgcggc tcgaaacgat gaaagcgttg gaaaccgccg ccgtacctac
     2401 gcgcaaaccc gcgcctgaaa ccgaaacgcc tctgcccggc ctttcagacg gcatcgcccc
     2461 cgttcccgcc gcttcgggca tcaccaagct tgccgtcgtc agcctttgcc caccgatcga
     2521 ggatgcggtt tacgggcaac tgttccacgg caaagcgggt gtcctgcttg acaacatact
     2581 caaagccgta ggactggatg ccgcttatgt acacaagacc agctgggtga aaaccgccgc
     2641 cgtcggcaac ccgatgccgt ctgaacaggc cgtcgcgaat gcgctgggtc aaatcgccag
     2701 ggaactcgac ggctgccgtg cccccgccgt ccttttcctc gggcaggctt ttgtccagcc
     2761 tgaacggcaa acgatgattg aaactttgtg cggcagccgt cccttcttca tcatcgacca
     2821 tcccgctcgg cttttacgcc aacccgaact taaagcccga aactggcagg tgttgaaaca
     2881 gttgaaacac gccttgcagg caggcggcag ttgaagcagg ccgcacgggg cggtagaatc
     2941 gcaactgcgt cccaatatct gacagaaagc acaaaatgac cgatttccgc caagatttcc
     3001 tcaaattctc cctcgcccaa aatgttttga aattcggcga attcaccacc aaagccggac
     3061 ggcggtcgcc ctatttcttc aatgccggcc tctttaacga cggcttgtcc acgctgcaac
     3121 tggcaaaatt ctatgcacaa tccatcattg aaagcggcat ccgattcgat atgctgttcg
     3181 gtcccgccta caaaggtatt attttggcgg cggcaaccgc gatgatgctg gcggaaaaag
     3241 gcgtgaacgt cccgtttgcc tacaaccgca aagaagccaa agaccacggc gaaggcggcg
     3301 tgttggtcgg cgcgccgctt aaagggcgcg tgctgattat cgacgacgtg atttccgccg
     3361 gcacatccgt acgcgaatcg atcaaactga ttgaagcgga gggtgcaacc cccgccggtg
     3421 tcgccatcgc gctcgaccgc atggaaaaag gcacgggtga attgagcgcg gttcaggaag
     3481 tggaaaaaca atacggtctg cccgtcgccc ccatcgccag cctgaacgat ttgtttattc
     3541 tgttgcaaaa caaccccgaa ttcggacagt tcctcgaacc cgtccgagcc taccgtcggc
     3601 agtacggcgt agaataaaaa caaagcatat gccgtccgaa ccgccttacg cctcagacgg
     3661 catcaaacct gacacacacg aggaaatacc atgcccgcct gtttctgccc ccactgcaaa
     3721 acccgtctct gggtcaaaga aacccaactc aatgtcgccc aaggcttcgt cgtctgccaa
     3781 aaatgcgaag gactgtttaa agccaaagac catctggcaa gcacgaaaga acccatattc
     3841 aacgatttgc ccgaggctgt ttcggatgtc aaactcgttc accgcatcgg cacgcgcgcc
     3901 attggcaaga aacagatttc ccgcgacgaa atcgccggca tcctcaacgg cggtacaacc
     3961 ctgcacgata cgccgcccgc aaccgccgcc acccctgccg ccgcaccgca ggttgccgta
     4021 ccgcccgccg cgcctgcccg tcaggaaggg ttcaactgga cgattgcaac cctgtttgcc
     4081 cttatcgtcc tcattatgca gctttcctac ctcgtcatcc tatgatcgtg cccgacctct
     4141 ttgtcgccca cttccgcgaa gccgtcccct acatccgcca aatgcgcggc aaaacgctgg
     4201 tcgccggcat agacgaccgc ctgctcgaag gtgatacctt aaacaagctc gccgccgaca
     4261 tcgggctgtt gtcgcaactg ggcatcaggc tcgtcctcat ccacggcgcg cgccacttcc
     4321 tcgaccgcca cgccgccgcg caaggccgca cgccgcatta ttgccggggc ttgcgcgtta
     4381 ccgacgaaac ctcgctcgaa caggcgcagc agtttgccgg caccgtccgc agccgttttg
     4441 aagccgcatt gtgcggcagc gtttccgggt tcgcgcgcgc gccttccgtc ccgctcgtat
     4501 cgggcaactt cctgaccgcc cgtccgatag gtgtgattga cggaaccgat atggaatacg
     4561 cgggcgttat ccgcaaaacc gacaccgccg ccctccgttt ccaactcgac gcgggcaata
     4621 tcgtctggct gccgccgctc ggacattcct acagcggcaa gaccttctat ctcgatatgc
     4681 ttcaaaccgc cgcctccgtc gccgtctcgc ttcaggccga aaaactcgtt tacctgaccc
     4741 tttcagacgg catttcccgc cccgacggca cgctcgccga aaccctctcg gcacaggaag
     4801 cgcaatcgct ggcggaacac gccggcggcg aaacgcgacg gctgatttcg tccaccgttg
     4861 ccgcgctcga aggcggcgtg catcgcgtcc aaatcctcaa cggtgcctcc gacggcagcc
     4921 tgctgcaaga actcttcacc cgcaacggca tcggcacatc cattgccaaa gaagccttcg
     4981 tctccatccg gcaggcgcac agcggcgaca tcccgcacat cgccgccctc atccgcccgc
     5041 tggaagaaca gggcatcctg ctgcaccgca gccgcgaata cctcgaaaac cacatttccg
     5101 aattttccat cctcgaacac gacggcaacc tgtacggttg cgccgccctg aaaacctttg
     5161 ccgaagccga ttgcggcgaa atctcctgcc ttgccgtctc gccgcaggca caggacggcg
     5221 gctacggcga acgcctgctt gcccacatta tcgataaggc gcgcagtatg ggcataagca
     5281 ggctgttcgc cctctccaca aataccggcg aatggtttgc cgaacgcggc tttcagacgg
     5341 catcggaaga cgagttgccc gaaacgcggc gcaaagacta ccgcagcaac ggacgaaact
     5401 cgcatattct ggtacgtcgc ctgcaccgct gaccgcaacg gaaagccgcc gcagaaatgc
     5461 cgtctgaacc ccgtttcaga cggcatttcc ccgattataa agacctgccc aaccctcaag
     5521 gaccccgatg aaatcctacc ccgaccccta ccgccatttt gaaaacctcg attccgccga
     5581 aacgcaaaac ttcgctgctg aagcgaatgc cgaaacgcgc gcgcgttttt taaacaacga
     5641 caaggcgcgc gcgctttcag acggcatttt gaatcaaatg caggacacgc ggcagattcc
     5701 gttttgtcag gaacaccgcg cgcggatgta ccatttccat caggacgcgg aatatccgaa
     5761 gggcgtgtac cgcgtgtgca cggcggcgac ctaccgttcg ggctatccgg agtggaaaat
     5821 cctgttttca gtggcggact tcgacgaatt gctcggcgac gatgtatatt tgggcggcgt
     5881 gtcgcacttg gtggaaaagc ccaaccgcgc gttgttgaca ctaagcaaat caggcggcga
     5941 tacggcgtac acgctggaag tggatttgga agcaggggaa ttggtagaag gtggttttca
     6001 ctttccggca ggcaaaaacc aagtgtcgtg gcgcgatgaa aacagcgtgt gggtgtgtcc
     6061 ggcttgggac gaacgccagt tgaccgaatc gggctatccg cgtgaggtgt ggctggtgga
     6121 acgcggcaag agtttcgagg aaagcctgcc tgtgtatcaa atcgataaag atgcaatgat
     6181 ggtgaacgcg tggcgttatc tcgatccgca gggttcgccg attgatttga ttgaagcgtc
     6241 ggacggtttt tacaccaaaa cctatttgca ggtgtcggcc gaaggcgagg cgaaaccgtt
     6301 aaacctgccc aacgattgcg atgtggtcgg ctatctggcg gggcatcttt tgctgacgct
     6361 gcgcaaggac tggaaccgcg cgaaccaaag ctatccgagc ggtgcgctgg tggcggtgaa
     6421 gctgaatcgg ggtgaactcg gggcggcgca gcttttgttt gcgcctgatg aaacgcaggc
     6481 attggaaagc gtggaaacga ccaagcgttt tgtggtggcg agcctgctgg aaaacgtaca
     6541 aggccgtctg aaagcgtggc gttttgccga cggcaaatgg caggaagtcg aactgccgcg
     6601 cctgccttcg ggcgcgttgg aaatgaccga ccagccttgg ggcggcgacg tggtttacct
     6661 tgccgccggc gatttcacca caccgctgac gctgtttgcg ctggatttga acgtgatgga
     6721 actgaccgtc atgcgccgcc agccgcagca gttcgattca gacggcatcg aagtgcggca
     6781 gttttgggtg atgtcgtccg acggcgaacg catcccttat ttccacgtcg gcaaaaacgc
     6841 cgcgcccgac acgccgacgc tggtttatgc ctacggcggt ttcggcgtac ccgagctgcc
     6901 gcattatctg ggcagcatcg gcaaatactg gctggaagag ggcaacgcct tcgtgttggc
     6961 gaacatacgc ggcggcggcg agttcggccc gcgctggcat caggcggcgc agggaatcag
     7021 caaacacaaa agcgtcgatg atttgcttgc cgtcgtgcgc gatttgtccg agcgcggcat
     7081 cagttcgccc caacacatcg gtttgcaggg cggcagcaac ggcggcctga ttaccgccgc
     7141 cgccttcgtg cgcgaaccgc aaagcatagg cgcactggtg tgcgaagtgc cgctgaccga
     7201 catgatccgt tatccgctgc tctccgccgg ttcaagctgg acagacgaat acggcaatcc
     7261 gcaaaaatac gaagtctgca aacgccggtt gggcgaattg tcgccgtatc acaatctttc
     7321 agacggcatc gattatccgc ccgcgctcat caccaccagc ctcagcgacg accgcgtcca
     7381 tcccgcccac gcgctcaagt tttacgccaa actgcgcgaa acctcgccgc aatcttggct
     7441 ctactcgcct gacggcggcg gccataccgg caacggcacg cagcgcgaag ccgccgacga
     7501 actcgcctgc gtgttgctgt ttttgaaaga gtttttgggc taagggcggg gagcggcact
     7561 gccgccgcga atgaaaaaag gtcgtctgaa actgcttttt cagacgacct tttttaatgg
     7621 ttgtttcaaa tcaaaatatc tatgccgccg gccccatcag cacttcttca catccgaagg
     7681 caaaaatccg taatgccgtc tgaacgcttc gttgaaccgt cccgcgtggc ggtagccgca
     7741 aaagtgcatg gcggcttgga cggtgctgcc ggattcgatg agggcgagcg cgtgttccag
     7801 ccgcaggcgg cgcaggcatc cggcgacggt ttcaccggtt tgcgctttga aatagcgttt
     7861 caggtagcat tcgttcagtc cgacgcggcg ggcgatttcg gcgatggtca gcggacgggc
     7921 gaattcgtgt tgcaggatgt cggcggcttc gtctatgcgc cgacggcggt aaccgttgtc
     7981 gtggcggcgg aaggtgaagc gcaataatcg ggcggagagt tccagcgcgg cggcttcgtc
     8041 ggcaagcagg ccgaagccgt ccgattcgaa cgggcgttgc agcagtgggc aggccgccgc
     8101 cgtcagtgcc gccgcgtttt gcgccagccg ttgcagggcg aatcggccta tcgtttgcgg
     8161 cgaaaacagg cgttcgtcca gcaagccttc gtcgtgccag cggcgcagtt tttccagcga
     8221 aaaatccaaa tgcagcgcgc acatgccgct gttgtcgggc agcagggttt cggatacgtc
     8281 cgccaactcg ccgcgtacca gccagatttc gccggcagac gggcggtatt ccctgccgcc
     8341 catttgtaac cggttctgcc ccgacaccat gacgaacaag gcgcagttgt ggctgaaatt
     8401 gtggatttcg gtgggaaacg cgcccgttcc gccgccgcgc atccgcgaca aggtgatgcc
     8461 cgaatcgaag cggttgatgc acatttccag atgcaaaccg ggctgttttg cctgcgcaat
     8521 gagcgcgctg tcggaacagc cgtccaacgc ccagccggat ttatcggagc ggacataggt
     8581 ttggtactgg cggtagatgg cggcggtgtt catgattgga taggaacgag ttgtctaaca
     8641 aatgaattaa ataggaatta ttaccaataa tcaagcgcag ggattggttg aaacggaaaa
     8701 ggtcgtctga aagggtgttt cagacgacct tttccgtatc gggaatttgt tttgccgtat
     8761 cgggaatttt gcgttttgcg gcgtggtttc tgcaggttgt ttgcttaata ataaacattc
     8821 ttattcgtat gcaaaggaac cgcacaccgt gaaaccgcgt ttttattggg cagcctgcgc
     8881 cgtcctgctg accgcctgtt cgcccgaacc tgccgccgaa aaaactgtat ccgccgcatc
     8941 cgcatctgcc gccacactga ccgtgccgac cgcgcggggc gatgccgttg tgccgaagaa
     9001 tcccgaacgc gtcgccgtgt acgactgggc ggcgttggat acgctgaccg aattgggcgt
     9061 gaatgtgggc gcaaccaccg cgccggtgcg cgtggattat ttgcagcctg catttgacaa
     9121 ggcggcaacg gtggggacgc tgttcgagcc cgattacgaa gccctgcacc gctacaatcc
     9181 tcagcttgtc attaccggcg ggccgggcgc ggaagcatat gaacagttgg cgaaaaacgc
     9241 gaccaccata gatctgacgg tggacaacgg caatatccgc accagcggcg aaaagcagat
     9301 ggagaccttg gcgcggattt tcggcaagga agcgcgcgcg gcggaattga aggcgcagat
     9361 tgacgcgctg ttcgcccaaa cgcgcgaagc cgccaaaggc aaaggacgcg ggctggtgct
     9421 gtcggttacg ggtaacaagg tgtccgcctt cggcacgcag tcgcggttgg caagttggat
     9481 acacggcgac atcggcctac cgcctgtaga cgaatcttta cgcaacgagg ggcacgggca
     9541 gcctgtttcc ttcgaataca tcaaagagaa aaaccccgat tggattttca tcatcgaccg
     9601 taccgccgcc atcgggcagg cagggccggc ggctgtcgaa gtattggata acgcgctggt
     9661 acgcggcacg aacgcttgga agcgcaagca aatcatcgtc atgcctgccg cgaactacat
     9721 tgtcgcgggc ggctcgcggc agttgattca ggcggcggag cagttgaagg aggcgtttga
     9781 aaaggcagaa cccgttgcgg cggggaaaga gtagggagtc gtctgaaaac ggagtttccg
     9841 aaggaagcgg ggggtttctg cgaagctaaa gtgcggtttc aacgaattga aaagcagcct
     9901 gtatgttgaa aataccgctc aagcaaacct acggtttgcc gccctctccc tagccctctc
     9961 ccacagggag aggggattgg ggtgcaggct gcctttaagg tttaggcaaa tttttaactt
    10021 cgttgaagct gcgatttcag acgacctttt ggagtaccgc aggcacacgc atcgaacggc
    10081 tgaatcaaag ttcagaccga tggcagcccg cacccgagtt tatgcggcaa acagcgaggc
    10141 tacggcaacc cgtcccctct ccctgtggga gagggttagg gagagggcgg taagccgcag
    10201 gcttacatca aagccgataa cgcttccgtt acaactccgc ccactgaaag cagcctgcaa
    10261 cgaagccaaa acgacaaacc gcatcgtaaa ccacccaacc cataggagaa ccccatgcaa
    10321 aacgaaacca tcaacctgaa acagcacctt gccgccatca aagaatactg gcagcccgaa
    10381 atcatcaacc gccacgggtt ccaattccgc ttggtcaaac ttttgggcga ttacggctgg
    10441 catacgcacg gatacagcga caaagtgctg tttgccgtgg agggcgacat ggcggtggac
    10501 ttcgccgacg gcggcagcat gacgatacgc gagggcgaga tggcggtcgt gccgaagtcg
    10561 gtgtcgcacc gcccgcgttc ggaaaacggc tgctcgttgg tgctgattga gttgtccgac
    10621 ccgtccgagg ccgtctgaaa acgaagtttc cgaaggaagc tgagtttctg cgaagctaaa
    10681 agcagcctgc accttcaatc aatatgccga aaatacaacc ccaccgcaca ccaacacaca
    10741 aaggaaatcc catgacacgc ttcaaatatt ccctgctgtt tgccgccctg ttgcccgtgt
    10801 acgcgcaggc cgatgtttct gtttcagacg accccaaacc gcaggaaagc actgaattgc
    10861 cgaccatcac cgttaccgcc gaccgcaccg cgagttccaa cgacggctac actgtttccg
    10921 gcacgcacac cccgctcggg ctgcccatga ccctgcgcga aatcccgcag agcgtcagcg
    10981 tcatcacatc gcaacaaatg cgcgaccaaa acatcaaaac gctcgaccgc gccctgttgc
    11041 aggcgaccgg caccagccgc cagatttacg gctccgaccg cgcgggctac aactacctgt
    11101 tcgcgcgcgg cagccgcatc gccaactacc aaatcaacgg catccccgtt gccgacgcgc
    11161 tggccgatac gggcaatgcc aacaccgccg cctatgagcg cgtagaagtc gtgcgcggcg
    11221 tggcggggct gctggacggc acgggcgagc cttccgccac cgtcaatctg gtgcgcaaac
    11281 gcccgacccg caagccattg tttgaagtcc gcgccgaagc gggcaaccgc aaacatttcg
    11341 ggctgggcgc ggacgtatcg ggcagcctga atgccgaagg cacgctgcgc ggccgcctgg
    11401 tttccacctt cggacgcggc gactcgtggc ggcagcgcga acgcagccgc gatgccgaac
    11461 tctacggcat tttggaatac gacatcgcac cgcaaacccg cgtccacgca ggcatggact
    11521 accagcaggc gaaagaaacc gccgacgcgc cgctcagcta cgccgtgtac gacagccaag
    11581 gttatgccac cgccttcggc ccgaaagaca accccgccac aaattgggcg aacagccgcc
    11641 accgtgcgct caacctgttc gccggcatcg aacaccgctt caaccaagac tggaaactca
    11701 aagccgaata cgactacacc cgcagccgct tccgccagcc ctacggcgta gcaggcgtgc
    11761 tttccatcga ccacaacacc gccgccaccg acctgattcc cggttattgg cacgccgacc
    11821 cgcgcaccca cagcgccagc gtgtcattga tcggcaaata ccgcctgttc ggccgcgaac
    11881 acgatttaat cgcgggtatc aacggttaca aatacgccag caacaaatac ggcgaacgca
    11941 gcatcatccc caacgccatt cccaacgcct acgaattttc ccgcacgggc gcctatccgc
    12001 agccatcatc gtttgcccaa accatcccgc aatacggcac caggcggcaa atcggcggct
    12061 atctcgccac ccgtttccgc gccgccgaca acctttcgtt gatactcggc ggcagataca
    12121 gccgttaccg caccggcagc tacgacagcc gcacacaagg catgacctat gtgtccgcca
    12181 accgtttcac cccctacaca ggcatcgtgt tcgacctgac cggcaacctg tcgctttacg
    12241 gctcgtacag cagcctgttc gtcccgcaat cgcaaaaaga cgaacacggc agctacctga
    12301 aacccgtaac cggcaacaat ctggaagccg gcatcaaagg cgaatggctt gaaggccgtc
    12361 tgaacgcatc cgccgccgtg taccgcgccc gtaaaaacaa cctcgccacc gcagcaggac
    12421 gcgacccgag cggcaacacc tactaccgcg ccgccaacca agccaaaacc cacggctggg
    12481 aaatcgaagt cggcggccgc atcacgcccg aatggcagat acaggcaggt tacagccaaa
    12541 gcaaaacccg cgaccaagac ggcagccgcc tgaaccccga cagcgtaccc gaacgcagct
    12601 tcaaactctt cactgcctac cactttgccc ccgaagcccc cagcggctgg accatcggcg
    12661 caggcgtgcg ctggcagagc gaaacccaca ccgaccctgc cacgctccgc atccccaacc
    12721 ccgccgccaa agcccgcgcc gccgacaaca gccgccaaaa agcctacgcc gtcgccgaca
    12781 tcatggcgcg ttaccgcttc aatccgcgcg ccgaactgtc gctgaacgtg gacaacctgt
    12841 tcaacaaaca ctaccgcacc cagcctgacc gccacagtta cggcgcactg cggacagtga
    12901 acgcggcgtt tacctatcgg tttaaataag gtcgtctgaa aacggagttt ctgcgaa
//
LOCUS       DAWITQ010000043        12812 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.043, whole genome shotgun sequence.
ACCESSION   DAWITQ010000043 DAWITQ010000000
VERSION     DAWITQ010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12812)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12812)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12812
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.043"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            389..1105
                     /locus_tag="WIX18_000954"
     CDS             389..1105
                     /locus_tag="WIX18_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ5238083.1"
                     /translation="MTMHETTDRLFEIAKEQGVLKPADIAERLNISQQALKNWESRGI
                     AAKALPEVAKAFGVSETWLRTGEGSRTAPVLIDPDLPHEVKDIHRPMTWSSNDPLPDD
                     DYVFVPYLKESCFKGGVGTYEIPDYNGYRLPFGKSTLKRKGINPDNVFCCTLTGDSME
                     EKIAEDAAIAVDTGETAIRDGKIYAFAQDGMFRVKYLIRQPGNSVLIRSHNSGFYGDE
                     NAPLDSLTVIGRVFWWSVLD"
     gene            1208..1633
                     /locus_tag="WIX18_000955"
     CDS             1208..1633
                     /locus_tag="WIX18_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238084.1"
                     /translation="MNFLGVQGELKVHELHHRTATLCFEWLGEVSAPRRKENYKDLKP
                     NVLYDFDGSGKHFANPDARYLLPVGSSGLILKHIQIDDEDTLLRLWCARNIPMPHRLS
                     KIPMLRQYYLSKAWHEIYAINQHLRKTKLIVDVAYDPTD"
     gene            1877..2077
                     /locus_tag="WIX18_000956"
     CDS             1877..2077
                     /locus_tag="WIX18_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238085.1"
                     /translation="METITIPKENFDALLNLARTAVALNENFIPKINYGASTIPAAGF
                     AALNEFGIARSTVESLEILKIK"
     gene            2145..2504
                     /locus_tag="WIX18_000957"
     CDS             2145..2504
                     /locus_tag="WIX18_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238086.1"
                     /translation="METQEKKFVPASKQIPTVNSGWLDRELGEAMSEAVRACLAHGKQ
                     SEITVKLKIQPQNIQSGTVKISHDVATKLPKEKREGGIVFATPDGNIQADDPAQGKLK
                     LKQVSNTSSTLKMVRSN"
     gene            2529..3383
                     /locus_tag="WIX18_000958"
     CDS             2529..3383
                     /locus_tag="WIX18_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfdQ family protein"
                     /protein_id="HEZ5238087.1"
                     /translation="METQENMIKTALQAAQKPFFEFAPNNTPLVFTPDQDGGWRYKSH
                     PELMQNPYRKCGKFLMHDTASLIKFVQKHKQDGTQIYIDADFKSGRIDVTAVINGHTQ
                     QAPGWLDFYAVYTPQHTTSASNWLNNNAHRMNQMEFSHFLTNNARNIVSKNPGNENSV
                     YPTAAEVLDFALNLEYTEKTTFKQGYREQDGRINFTFQSEDSGQTEKNLKMFERFGIE
                     FTPHQGGASYFVEALLKFRIDKNSGALVLWYELQQIDAVIEQAAKDISEAVQKAFPEI
                     DIYFGVIA"
     gene            3453..3668
                     /locus_tag="WIX18_000959"
     CDS             3453..3668
                     /locus_tag="WIX18_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238088.1"
                     /translation="MTITEEYSIDIRVTSEQGKNDYGYPTERYGCDIINTDGELLVGI
                     EPEYKTPFAAVRKALICLTKDNLKNAA"
     gene            3703..3963
                     /locus_tag="WIX18_000960"
     CDS             3703..3963
                     /locus_tag="WIX18_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238089.1"
                     /translation="MKYLIRTALLAVAAAGIYACQPQSEAAVQVKAENSLTAMRLAVA
                     DKQAEIDGLNAQIDAEIRQREAEELKDYRWIHGDAEVPELEK"
     gene            3960..4253
                     /locus_tag="WIX18_000961"
     CDS             3960..4253
                     /locus_tag="WIX18_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238090.1"
                     /translation="MNFQEENENIKNDIEINLLHSAEADSVEAMMDLAVYGLAAMVAK
                     HNKTRGEQLVLQAIAGHMRKLLAALPETESLVQTGKVYRRLEDLIFKTYLPEQ"
     gene            4256..4447
                     /locus_tag="WIX18_000962"
     CDS             4256..4447
                     /locus_tag="WIX18_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238091.1"
                     /translation="MNTNQDTIPFGGNLVICCSTGNGGDGRFSCLITDQIPDLNLVRS
                     GQAFPMFIYEYETREKRKA"
     gene            4447..4587
                     /locus_tag="WIX18_000963"
     CDS             4447..4587
                     /locus_tag="WIX18_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate dehydrogenase"
                     /protein_id="HEZ5238092.1"
                     /translation="MDTLLKIIIALSFSGAEALVVWLFITAADAVLRRFQKPSHYRRV
                     KK"
     gene            4584..4793
                     /locus_tag="WIX18_000964"
     CDS             4584..4793
                     /locus_tag="WIX18_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate dehydrogenase"
                     /protein_id="HEZ5238093.1"
                     /translation="MNINELGARIDRPTIRELIAYATCRNRPISNSTLLRMEKDGRIP
                     CRLKTPLTSPVWDTREVLEALGLQQ"
     gene            complement(4851..5768)
                     /locus_tag="WIX18_000965"
     CDS             complement(4851..5768)
                     /locus_tag="WIX18_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KilA-N domain-containing protein"
                     /protein_id="HEZ5238094.1"
                     /translation="MNVSVLNFGNTPVSFRQDGFLNATAIASHFGKLPKDYLKSEQTQ
                     QYISALAENLSVRRKILTEANQIVIVKRGGSEQGTWLHPKLAIHFARWLNPKFAVWCD
                     EQIEILLNGKISDGIKTVTPKPTRALPDGLTGEQIEAVKKLHNALTKSAPKEAQARIA
                     ITLWSAVKSKFGCSYKEVPAEQFPEVLSVMGRVAVENGVLYGEVLDREPLPAPQPALP
                     ISGNALYDLAVAVRYGAWAIQMGRDVSLPLKQLGCKQAVTMWTVWAETRSRLKAAANA
                     LEALNAHADAEHAAKIRPMLPEIRNLSSV"
     gene            complement(6637..6993)
                     /locus_tag="WIX18_000966"
     CDS             complement(6637..6993)
                     /locus_tag="WIX18_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4760 domain-containing protein"
                     /protein_id="HEZ5238095.1"
                     /translation="MAERNNAALQEAITIVNGLAKTDGCILATYTSDTPDKKKDREAI
                     LTVLNQREFVCAGVLGGALHEKMYKDFEYSMLLRDWDNLSSFIFEIRRIRSAPTAFQE
                     FEAVARKWKKKPLKTK"
     gene            complement(7541..7921)
                     /locus_tag="WIX18_000967"
     CDS             complement(7541..7921)
                     /locus_tag="WIX18_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HEZ5238096.1"
                     /translation="MPLKFQPRERSVIMCDFRGYEELEMVKKRPVVVIARNRHNGKLV
                     TVVPLSSTEPVPLADYHHKMSGNPLPDKPHIQCWAKCDMTATVGLARLDRYKPKGRDR
                     CIPIISEEDFQAIKTAVAKAFKLY"
     gene            complement(8078..9274)
                     /locus_tag="WIX18_000968"
     CDS             complement(8078..9274)
                     /locus_tag="WIX18_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HEZ5238097.1"
                     /translation="MAKIITPLSANQVKNAKPRDKLYKLSDGGGLALWVYPTGGRSWK
                     LSFVQDGRQQTISLGRYPDFSLADAREWREEVRRKRAHGENVVNKKVRADFAFEKVTR
                     DWFVRWSKGRSEKYAGQVMRNFERWVFPAIGNLDIRQVRTADVVGCLRVMEARGIVDT
                     LRKTKNSLKMVFAFAVGSGMMEINPVAQIGSGVFERAKTGNMAALSPSELPRLIDFLE
                     QRNEFAVYAGRVRIHPVTRLCIYWLLLTMTRIQEAALMEWSELDGEVWRIPAERKKER
                     RGHDVPLSRAMQWVLDQARALNVNGRFVFESVNFQGHINKESPRVAMQRAGLDTTAHG
                     LRSLARTYLREVLKVDNDVAEKLLAHSLGTRTQTAYNRSELWEERKDALERWGNDVLR
                     LAKNGK"
     gene            complement(9465..9554)
                     /locus_tag="WIX18_000969"
     tRNA            complement(9465..9554)
                     /locus_tag="WIX18_000969"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9518..9520),aa:Ser,seq:cga)
     gene            complement(9661..9748)
                     /locus_tag="WIX18_000970"
     tRNA            complement(9661..9748)
                     /locus_tag="WIX18_000970"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9712..9714),aa:Ser,seq:tga)
     gene            complement(9831..10610)
                     /gene="yaaA"
                     /locus_tag="WIX18_000971"
     CDS             complement(9831..10610)
                     /gene="yaaA"
                     /locus_tag="WIX18_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HEZ5238098.1"
                     /translation="MFFVLSPAKNLNEKDPAPVSEFTQPDLLAESDILMQQLRELAPQ
                     QIAELMHVSDKIALLNAQRNAEWHTPFTPENAKQAVFMFNGDVYEGMDANTLDIGQIR
                     YLQNHVRLLSGLYGLLRPLDLIQPYRLEMGTAFANLRGKNLYEFWGDIITNLLNDTLA
                     QAGSNTLVNLASQEYFKSVNTKKLRARLITPIFKDEKNGKYKIISFYAKRARGLMVRY
                     AVEHHITDPEMLKNFNYEGYAFNDAASNESEWVFMRSEQIK"
     gene            complement(10774..11961)
                     /gene="dapC"
                     /locus_tag="WIX18_000972"
     CDS             complement(10774..11961)
                     /gene="dapC"
                     /locus_tag="WIX18_000972"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyldiaminopimelate transaminase"
                     /protein_id="HEZ5238099.1"
                     /translation="MNTLLNQLKPYPFARLREAMQGISAPEGLEAVPLHIGEPKHPTP
                     KVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREA
                     LFSFVQTVLDPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSI
                     SEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNK
                     PLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSA
                     MSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQVFDVKLPDASFYIWLKVPD
                     GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAETIVS
                     LYR"
     gene            complement(12038..12490)
                     /gene="dut"
                     /locus_tag="WIX18_000973"
     CDS             complement(12038..12490)
                     /gene="dut"
                     /locus_tag="WIX18_000973"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEZ5238100.1"
                     /translation="MNIEVEMKVLDERMADFIPTYATAGSAGLDLRACLDEEVVLQPG
                     ETFLVPTGLAIYLANPSYAAVLLPRSGLGHKHGIVLGNLVGLIDSDYQGELKVSLWNR
                     SSEPFAVKPFERIAQMVIVPIVQARFKRVEEFVGSSRGEGGFGSTGLH"
BASE COUNT         3508 a         3294 c         2928 g         3082 t
ORIGIN      
        1 atattaaaaa ttatcgtcat caatgcggct tccccagccc gcggcgagct ttccacgaca
       61 ggcttttttt atttgggttg gtcgtctggt ttctttgagt tcaaaaacag gtcgggatac
      121 ttaagtttta ttcgtgcagg tatcccgcgc ttcgtccaat tgaaaacgca ttgagggcta
      181 ttccctgtta ttcgaccaac ttccgcgtaa ctgccgattg attgcaacag gcgtttgtct
      241 tcattgactc ttttatccat aaataaacca aatgtttaaa tctaatgcta atattaaaca
      301 ctatgtttag ataaaaatca agtcttgtgt aacaacattt tgtttaaata tgggagaata
      361 attaagccaa ccgcgaataa gattaaaaat gacaatgcac gagacaactg acagactttt
      421 tgagatagcc aaagagcagg gagttttaaa gccggctgac atagcagagc gtctgaatat
      481 cagccaacag gctttgaaaa actgggaaag tcgtggcata gcggcaaagg cgctgcctga
      541 agtagcaaaa gcattcggtg tatctgaaac atggctgaga acaggtgaag gcagccgaac
      601 cgcgcccgtc cttattgacc ccgacctacc ccacgaagtc aaagacatcc accgcccgat
      661 gacgtggagc agcaacgacc cgctgcccga cgatgattat gttttcgtcc cctacctcaa
      721 agagagctgc ttcaaaggcg gagtaggcac gtatgaaatc cccgattaca acggctaccg
      781 cctgccgttc ggcaaatcca cgcttaaacg caaaggcatc aatcccgaca acgtgttttg
      841 ctgcaccctg accggcgaca gtatggagga aaaaatcgca gaagacgcgg caattgccgt
      901 agatacgggc gaaaccgcca tacgcgacgg caaaatctac gccttcgccc aggacggtat
      961 gttccgcgtg aagtacctga tacggcagcc tggcaacagc gttctgatac gcagccacaa
     1021 cagcggtttc tatggcgacg aaaacgcccc cttggacagc ctgaccgtta tcggcagggt
     1081 attttggtgg agcgtgctgg attgaaaaat gttgctatta cgacgagata atattgatag
     1141 ggctttcaag attgtcaaaa ataggcgttt tgattcccct tggtggcctg gtgagtacga
     1201 tgccggtatg aatttccttg gcgtacaagg agagttgaag gttcacgagc tgcatcacag
     1261 aacagcaacc ctgtgctttg agtggcttgg cgaagtatct gcgccgcgca gaaaagagaa
     1321 ctacaaagac ctcaagccaa atgtattgta tgactttgat ggttccggta agcattttgc
     1381 caaccctgac gcaaggtatc tattgcccgt cggttcaagc ggcttaatct taaaacatat
     1441 ccaaatcgat gacgaagaca ctctgttgcg gctatggtgc gcacgaaata tcccaatgcc
     1501 acaccggcta tctaaaatcc cgatgcttcg gcagtattat ctaagcaagg catggcacga
     1561 aatttatgct atcaaccaac acctaaggaa aacgaagctg atagttgatg tggcatacga
     1621 ccccacagat taaacaaccc gcccgcatta tgcgggcttt tttcatgccc cgccgaacct
     1681 gaaaacaaca caaaaccgac aaagccgcct taataggcgg tttttttgcg cctgcgaaat
     1741 ctcaaaaata aattctttta ataatcaaaa tgtttataaa ccttaaacaa aaatcttaaa
     1801 cagattgttg catattatta aacgctatgt ttaaatacac ccatcgaaac aaacaacagc
     1861 cacatggagt accgacatgg aaaccatcac catccctaaa gaaaatttcg acgctttgct
     1921 aaatctcgca agaaccgccg tcgccctgaa cgaaaatttt attccaaaaa taaattacgg
     1981 agcatccacc ataccagcag ccggctttgc cgcacttaac gagtttggaa tagcccgctc
     2041 caccgtggaa tctttggaaa ttctcaaaat taaataacct cctcggtatt gtcatcccgt
     2101 gataccggca acctaactaa cctctcttta aaggaaaatc aaaaatggaa acccaagaaa
     2161 agaaatttgt tcctgcctcc aagcaaatac cgaccgtaaa tagcggctgg ttagaccgtg
     2221 aattaggcga agccatgagt gaagcggtgc gtgcctgcct tgctcacggt aaacagtcag
     2281 aaattactgt caagctcaaa atccaacccc aaaacatcca aagcggaacg gtaaaaatca
     2341 gccacgatgt agcaaccaaa ctgcccaaag aaaaacgcga aggcggcatc gtctttgcta
     2401 cacctgacgg caacatccaa gccgacgatc cggcacaagg aaaattgaaa ctcaaacaag
     2461 tttccaatac gtcaagcacg ttgaaaatgg tcagatccaa ctaactcaaa cacaaaagga
     2521 aatctaaaat ggaaacccaa gaaaacatga ttaaaaccgc cttacaagca gctcaaaaac
     2581 ctttttttga gtttgcaccg aacaatactc cgcttgtatt cacaccagac caagacggtg
     2641 gctggagata caaatcacac cccgaattga tgcaaaaccc gtaccgcaag tgcggcaaat
     2701 tcctcatgca cgataccgcc agtcttatta agtttgtaca aaaacacaaa caggacggca
     2761 cacaaatcta cattgatgcc gatttcaaat cagggcgtat tgatgtcacc gccgtcatca
     2821 atggccatac gcaacaagct ccgggctggc tcgattttta tgccgtatac accccgcaac
     2881 acactacatc ggcatccaac tggctgaaca acaatgcgca ccgcatgaat cagatggagt
     2941 tttcccattt cctgaccaac aatgcccgca acatcgtatc caaaaatccc ggtaacgaaa
     3001 attccgttta cccgaccgcc gccgaagtat tggatttcgc gctcaatctc gagtacaccg
     3061 aaaaaaccac cttcaaacaa ggctatcgtg aacaggacgg cagaatcaac tttaccttcc
     3121 aatccgaaga ctcagggcaa acagagaaaa acctcaaaat gtttgaacgt ttcggcatcg
     3181 agttcacccc gcatcaaggc ggtgcatcct actttgttga agccctgttg aaattccgca
     3241 tcgacaaaaa cagcggcgca ctcgtcctgt ggtacgaatt gcagcaaatc gatgctgtaa
     3301 tcgaacaagc ggcaaaagac atttccgaag ccgtacaaaa agccttccct gaaatcgaca
     3361 tctatttcgg cgtaatcgcc taaaaaaaag tcgtctgaaa tcgtgaacct tcagacgacc
     3421 tccacaaaaa cccaaatccg aaagacccca aaatgaccat cacagaagaa tactccatcg
     3481 acatccgagt aacctcagaa caggggaaaa acgactacgg ctaccccacc gaacgctacg
     3541 gatgcgacat catcaacaca gacggggagc tacttgtcgg catagagcca gagtacaaaa
     3601 ccccctttgc cgccgtcaga aaggcgctca tctgtctgac aaaagacaac ctcaaaaacg
     3661 ctgcctgata ttaagccgtt accccaataa tgaggaatca aaatgaaata cttgatccgc
     3721 accgccttac tcgcagtcgc agccgccggc atctacgcct gccaaccgca atccgaagcc
     3781 gcagtgcaag tcaaggctga aaacagcctg accgctatgc gcttagccgt cgccgacaaa
     3841 caggcagaga ttgacgggtt gaacgcccaa atcgacgccg aaatcagaca acgcgaagcc
     3901 gaagaattga aagactaccg atggatacac ggcgacgcgg aagtgccgga gctggaaaaa
     3961 tgaactttca ggaagaaaac gagaacatca agaatgacat agagattaat ctcttgcatt
     4021 ccgctgaagc cgacagcgtg gaggcaatga tggacttggc ggtttacggg ctggcggcga
     4081 tggttgccaa acacaacaaa acgcgcggcg agcagcttgt gttacaggcg attgccggtc
     4141 atatgcggaa gcttttggcc gcgcttcccg aaaccgagtc attggtgcag accgggaagg
     4201 tttaccgccg acttgaagat ttgattttta aaacgtattt gccggagcag taaagatgaa
     4261 cacgaatcaa gatacgattc catttggcgg caaccttgtg atttgctgtt cgacgggaaa
     4321 cggcggggac gggcggtttt cttgtctgat taccgatcag ataccggatt taaatcttgt
     4381 cagaagcggg caggcgttcc cgatgttcat ttatgagtac gaaactagag aaaaaaggaa
     4441 agcctgatgg acaccctatt aaaaatcatc atcgcgctgt cattttccgg cgctgaggca
     4501 ttggtggtat ggcttttcat cacggccgcc gatgccgtat tacgccgctt ccagaaaccg
     4561 agtcattaca ggagagtaaa aaaatgaaca tcaacgaact gggcgcaagg atagaccgcc
     4621 cgaccatccg cgaactgatt gcctacgcaa cctgccgcaa ccgccccatt tcaaactcga
     4681 cactgctgcg tatggaaaaa gacgggcgga taccgtgccg tctgaaaacc ccactcacat
     4741 cccccgtatg ggacacccgc gaagttttgg aagccctggg gttacagcaa taaaaaaacg
     4801 cccgattagg gcgttttcac attcagacgg cttttgtatt ccctactgca tcaaaccgac
     4861 gacaggttgc ggatttcggg cagcatcggg cggatttttg ccgcgtgttc cgcgtcggcg
     4921 tgtgcgttta aggcttcgag ggcgtttgcg gcggctttga ggcggctgcg tgtttccgcc
     4981 cagaccgtcc acatcgttac cgcctgtttg cagccgagct gcttcagcgg cagggaaacg
     5041 tctctgccca tttggatggc ccacgcgccg tatctgacgg caacggcgag gtcgtacagg
     5101 gcgttgccgc tgatgggcag ggcaggttgc ggtgcgggca atggttcgcg gtcgaggact
     5161 tcgccgtaca gcacgccgtt ttcaactgcc acgcggccca tcacgcttaa aacttcgggg
     5221 aactgttcgg caggtacttc tttgtagctg catccgaact tgcttttgac ggcagaccaa
     5281 agggtaatgg cgatacgcgc ctgcgcttct ttgggtgcgg atttggtcag ggcgttgtgc
     5341 agttttttga cggcttcgat ttgttcgccg gtcaagccgt ccggaagggc gcgggtgggt
     5401 ttgggggtaa ctgtttttat gccgtctgaa attttgccgt taagtaaaat ttcaatctgc
     5461 tcatcgcacc aaaccgcaaa tttcggatta agccaacggg caaagtgaat agcgagtttg
     5521 ggatgcagcc atgtgccttg ctcactgcca ccacgcttca cgataactat ttgatttgct
     5581 tccgttagga tttttctcct aacgcttaaa ttctcagcaa gtgcagagat atattgttga
     5641 gtttgttcac tttttaggta gtctttaggt aacttgccaa agtgagatgc aatggcggtt
     5701 gcatttaaaa aaccgtcttg acggaaagat acaggggtgt taccaaaatt gagaacagat
     5761 acgttcatga tagtttccta gtttagtttc gaaagaccca aatgggtggt cgggaggttc
     5821 gaaaacctac tagaaaaggc cggcgttatt ccccttgcgg gtattgtatt ccgcaccctc
     5881 ccgaccatag gaaactagtt cggatatatc gaaacaaaca accaaacaag aaaacttatg
     5941 gacgtaaaaa attcacgctg acggggtaaa tgccgttcta gtagaggttt tcgacgcctc
     6001 gtgtttcgta atatatccaa tctttctatt ttctgcaagc ataaaaaagc cgccatgtgg
     6061 cggatagggt cgcggtcttc aacagcatgt aggatttagg aatgcccaaa ttgggcgcag
     6121 gggtgttgaa aacacgcaaa caggcgcgcc gccagcctta cgggtaggcg cacccccaca
     6181 taggagtaaa tcgatttgat acgtatagac gtaaaaaatt ccactctatc gtgttggata
     6241 tacgctgttt gtcaggtgtt ttcaagcacc gtgggaaata ttatatagag ttatggaaat
     6301 gtgtcaagag aattagccca aatgggcgga cgcgcggtta agaacccaca taggagggcg
     6361 gacttattcc cctttcgggt cttgtattcg tcgcccacgc ggtcatagaa acttcctgct
     6421 atcgaaacaa acaacaagga aagaaaacta tagacatgaa aaaatcacat tgacggagtg
     6481 attgccgctg tagtgtggtt tctgacgcca cgaacaggaa tataaaacaa aaccccctgc
     6541 acatgcaagg ggtttcccaa aaaaccgtag gcggcaaact gaaaggccgt ctgaatttca
     6601 gacggcctat gttgcggcgg atgttaagct attaagctat ttggttttca gaggcttttt
     6661 cttccatttt cgggctacgg cttcaaattc ttgaaaggcc gtcggtgcgc tcctgatacg
     6721 gcgtatttca aaaataaagc tgcttaggtt gtcccagtca cgtaacagca tggagtattc
     6781 gaaatcttta tacattttct cgtgcagtgc tccgcctaat acgcccgcac agacaaattc
     6841 gcgctggttt aaaactgtca gtatggcttc acggtctttc ttcttgtccg gggtatccga
     6901 tgtataggtg gcgagtatgc atccgtctgt ttttgccagc ccgtttacta tggttatggc
     6961 ttcttgaagg gcggcattgt tacgttcggc catgatcagc gcgctttttg gcgttttctg
     7021 tattcctcat gatgccgtaa gcggcaacaa aaacgccgat aacagtcaat atcggcgttg
     7081 ctatctgtat taggttgtca gtcattgccg tcccagccgt ctgaaaggcg gaaatcacgg
     7141 ctttccgaat aaatatgtcc cattgtcatc cccttaagct gatgttgaaa ataaatcctt
     7201 gcgtcggaat atacggcatt gcttgactat tttcaagatt ctgtacctcg tgaaccggac
     7261 tatacaaaaa aaccgccttc gtgtaaagcg gttcttaaat cgcccgttaa ggcggacaca
     7321 acgatagcca aactggaaca ggaggcggca aaggcgggtt tgtccaaaac agccttgatt
     7381 gaaaggctga ttggggattt gtaggcgttt gcagatacga caaggggcgc attccgcgcc
     7441 ccatcacacg cacggacggc ttgtcatcgc ctgtcgcccg tgcgcggctg cccatatttc
     7501 agaacagtct tgcaagcccc tttaagggaa cggttttatt ctagtacagt ttgaatgcct
     7561 tggcaacggc tgttttaatc gcctgaaaat cctcttcact gattattgga atgcagcggt
     7621 cgcgcccttt gggtttgtat cggtctaatc gtgccaatcc gactgttgcc gtcatgtcgc
     7681 attttgccca acattggatg tgcggcttgt ccggtaaggg gtttccactc attttgtggt
     7741 ggtagtccgc caaagggaca ggttctgtgc tgcttaaggg tacgaccgtt accagtttgc
     7801 cgttgtgcct gtttcgcgct atgacgacga cagggcgttt cttgaccatt tccagttctt
     7861 cataaccgcg aaagtcgcac atgataaccg aacgttccct tggttggaat tttaaaggca
     7921 ttagccgctc ctgacgatga caggctgcta ttatagcagt tcttacacaa aaaaccgcct
     7981 tcgtgtaaag cggttgcaaa aaagccttcc aataaaaatg cggaaacggt tttttatttg
     8041 cgtttccgca taatacaaac acacacacaa aaaaaaatca ttttccgttt ttggcaagcc
     8101 tcaaaacatc attcccccac cgttccagcg catccttacg ctcctcccaa agctccgagc
     8161 ggttgtaagc cgtttgcgtc ctcgtcccca acgaatgggc aagcagcttt tccgccacat
     8221 cattatccac cttcagaacc tcgcgcaaat aagtacgcgc aagcgagcgc aaaccgtgcg
     8281 ccgtcgtatc cagccccgcc cgctgcatcg ccacgcgcgg actttcctta ttgatatgcc
     8341 cttgaaaatt cacactttca aacacaaacc gcccgttcac attcaacgcc cgcgcctgat
     8401 ccaacaccca ctgcatcgcc cgcgacagcg gcacatcatg cccccgccgc tcctttttcc
     8461 gttcggcggg gatacgccaa acctccccgt ccaactccga ccactccatc aacgccgcct
     8521 cctgaatccg cgtcattgtc aacagcagcc aatagataca aagccgcgtt acaggatgga
     8581 tacgcaccct gcccgcataa accgcaaatt cattgcgctg ctccaaaaaa tcaatcaggc
     8641 gcggcaattc agacggactc aacgctgcca tattccccgt tttcgcccgt tcaaacacac
     8701 ccgaaccgat ttgcgcgaca gggttgattt ccatcattcc cgaaccgacc gcaaacgcaa
     8761 acaccatctt cagactgttt ttcgttttgc gcaacgtatc aacgataccg cgcgcctcca
     8821 tcacacggag gcagccgacc acatccgccg tcctgacctg gcgaatatca agattgccga
     8881 tagccggaaa aacccaccgt tcaaaattcc gcataacctg tccggcatac ttttcagacc
     8941 gccccttcga ccaacgcaca aaccaatcac gcgtcacctt ctcaaaagca aaatccgccc
     9001 gcaccttctt attgacgaca ttttccccgt gcgcccgttt tcggcgcacc tcctcccgcc
     9061 attcccgcgc atcggccagc gaaaaatcag gataccgccc cagcgaaatt gtctgctgcc
     9121 ttccatcctg cacaaacgac agcttccaac tccgcccgcc cgtcgggtag acccacaaag
     9181 ccagcccgcc cccgtctgac aacttataca gcttatcgcg cggcttcgca tttttaacct
     9241 gatttgccga cagcggcgta atgattttcg ccattatggt aatttcccac ttatccaaaa
     9301 attaccatat acattaccat aaaaaaatgc aataagaaga taccgcaaga ttgcaaatga
     9361 tttactttga cgcgttttga tagggcaaac cgatgatttt tatatggtaa ttgacacaac
     9421 ttgaacaaaa aagaaccgcc ctgaatcagg gcggttttgt tttctggcgg aaacggtggg
     9481 attcgaaccc acggaggatt tgcaccctca gcggatttcg agtccgctgc attcagcctc
     9541 tctgccacgt ttccgaaaga tgtttcaacc taaaaggaaa cacgatgaag taaaaccaaa
     9601 taaaaatgcc gatgctttat gctacttcat ttttatttgg tttttgacct caaggatttg
     9661 cggaagcggt gagattcgaa ctcacggagg gctatcaacc ctcgacggtt ttcaagaccg
     9721 ttgcattaaa ccgctctgcc acgcttccgt cttcttgaag agtaggaata ataatgaagt
     9781 ttatacattt tgccaagcac ttttttcgga aaatacttaa tttattgttt tcattttatt
     9841 tgttccgaac gcataaaaac ccattcgctt tcatttgaag ccgcgtcatt gaatgcgtag
     9901 ccttcgtaat taaaattttt cagcatttca gggtcggtaa tatgatgttc taccgcatag
     9961 cgcaccatta atccgcgcgc gcgcttggca tagaaactga tgattttata tttaccgttt
    10021 ttttcgtctt taaatatcgg ggtaatcagc cgcgcccgaa gttttttcgt gttgacagac
    10081 ttgaaatatt cctgtgaggc aaggttgaca agcgtattgc tgcctgcttg ggcaagcgtg
    10141 tcatttaaaa ggttggtaat gatgtcgccc caaaactcat acaaattctt gccgcgcaaa
    10201 ttggcaaatg ccgtccccat ttccaaacga tagggctgta tcaggtctaa cgggcgaaga
    10261 agaccgtaca gaccggacag caggcggaca tggttttgca gatagcgtat ctgtccaata
    10321 tccaatgtgt ttgcatccat accttcgtaa acatcgccgt tgaacataaa gaccgcctgt
    10381 ttggcgtttt ccggcgtaaa cggcgtgtgc cattctgcat tgcgctgcgc gtttaagagg
    10441 gcaattttgt cggaaacgtg catcagttcg gcaatctgtt gcggcgcaag ctcgcgcaac
    10501 tgctgcatta gaatgtcgga ctctgccagc aggtcgggtt gggtaaactc gctgacaggg
    10561 gcagggtctt tttcgttaag gtttttcgca ggggaaagga caaaaaacat aatctgctcg
    10621 gtatagtgtc aaacacgggg attttaagtt taaacgtgtt tgcgggcaag ccgattagat
    10681 taaaagtgaa gtaaataccg ttacagcaaa ttcaaccgta agatattgaa aaatgccgtc
    10741 tgaacaaaag ttcagacggc atttttttat tctttaccga tatagggaaa caatggtttc
    10801 cgcagctttg acacaagttg cgacatcggc aaccaaagcg atacgcacat aaccttcccc
    10861 gggattgccc tgttcggtat cccgtgccaa aaagcgtccg ggcaatactt ggatagcggc
    10921 tttttgccat aaattgcgtg caaatgccaa atcgtcgcca tcggggactt tcaaccaaat
    10981 gtaaaacgag gcatctggta atttaacatc aaatacctgt tgcaaaatgg gaataacgcg
    11041 ctcaaatttt tcctgataca ggcggcggtt gtcgataacg tgctgttcgt catcccaagc
    11101 ggcaatgctt gcgcgctgca cgggaatgct cattgcactg ccgtgatagg ttctgtaaag
    11161 cagaaagttt ttaagcagtt cggcatcgcc ggcgacaaaa ccggaacgca ggcccggaac
    11221 gttggaacgc ttggacaaac tggtgaacat aagcagtttt tgcctgcttc gacccaactg
    11281 tgcagcggcc tgcaggcagc ctaaaggttt gttgccgtcg aaatagattt cggaatagca
    11341 ttcatccgag gcaataatga aaccatattt atcctgtaaa tcaaaaactt ctttccatcc
    11401 atccaaatcc agcacgctgc cgctggggtt gttgggcgag cagacgaaca ccagtttggt
    11461 gcgtttccaa acctcttcgg aaatactacg ccaatcgggg ttgaaagacg gcgcggggca
    11521 attggcaaaa tggatttcac cgccgcccaa aagtgtcgca ccttcgtaaa tctgataaaa
    11581 gggattcggg ctgacaattg cgggtttgat gccgtctgaa acagggtcca acacggtttg
    11641 aacaaaagaa aacaacgcct ccctactgcc taaaaccggc agaatttcat tatccgcatc
    11701 cactgtcaag ccatcataac ggcgttttaa ccagttcgca cacgcctgac gcagttcagg
    11761 caaaccggcc gtcagcggat atttttccaa ctcgtgcaat gaggcggtca gcgcatctgt
    11821 aatgactttc ggtgttggat gtttcggttc gccgatatgc agtgggacgg cttccagacc
    11881 ttcgggggcg gaaatgccct gcatcgcttc acgcagtcgg gcaaaaggat agggtttgag
    11941 ttggttgagt aaggtattca taatgttctc cggttgtcgg tatatcggaa gatatgccgt
    12001 ctgaacctga cggcacccat cagacggcat tttatattca atgcaaaccc gtactgccga
    12061 aaccgccttc tccacggctg cttccgacaa attcttcgac acgtttgaaa cgcgcctgca
    12121 cgattggaac gataaccatc tgcgcgatac gctcaaacgg cttgacggca aacggttcgc
    12181 tgcttctgtt ccataacgac accttcaatt ccccttgata atcggagtca atcaaaccga
    12241 ccaaattgcc caaaacaatg ccgtgtttat gccccaagcc ggaacggggc agcaaaacgg
    12301 cggcatatga aggattggcc aaataaattg ccaaacctgt cggcacaaga aacgtttccc
    12361 ccggctgcaa gacgacttcc tcatccaaac aggcgcgcaa gtccaaaccg gcagaacccg
    12421 ctgtcgcata ggtagggata aaatccgcca tcctctcgtc caatactttc atttctactt
    12481 caatattcat cgtcttgctc ctgcatacgg ccggtttcaa agatgggaga ttatacacaa
    12541 gccatgttta cgctgaaaca cagcaaatcg gttttgtttt gaaatccgtt gccaatgtat
    12601 aatacccgcc cttccggtta tgaagacgaa cattatgcac acactaaggc aacttatcag
    12661 aaatgactga aactcaaaaa actggattcc cactttcgtg ggaatgacgt ggtgcaggtt
    12721 tccgtacgaa tggattcgtc attcccgcgc aggcgggaat ctagacctgt cggtttcggt
    12781 ttttttggct agtgccgcaa cattaaattt ct
//
LOCUS       DAWITQ010000044        12340 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.044, whole genome shotgun sequence.
ACCESSION   DAWITQ010000044 DAWITQ010000000
VERSION     DAWITQ010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12340)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12340)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12340
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.044"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            200..1876
                     /gene="ettA"
                     /locus_tag="WIX18_000974"
     CDS             200..1876
                     /gene="ettA"
                     /locus_tag="WIX18_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HEZ5238101.1"
                     /translation="MSQQYVYSMLRVSKVVPPQKTIIKDISLSFFPGAKIGLLGLNGA
                     GKSTVLRIMAGVDKEFEGEAVPMGGIKIGYLPQEPELDPEKTVREEVESGLGEVAAAQ
                     KRLEEVYAEYANPDADFDALAEEQGRLEAIIAAGSSTGGGAEHELEIAADALRLPEWD
                     AKIDNLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVEWLEQFLVRFPGTVVAV
                     THDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKEKRLENEAKSEASRVKAMKQEL
                     EWVRQNAKGRQAKSKARLARFEEMSNYEYQKRNETQEIFIPVAERLGNEVIEFVNVSK
                     SFGDKVLIDDLSFKVPAGAIVGIIGPNGAGKSTLFKMIAGKEQPDSGEVKIGQTVKMS
                     LIDQSREGLQNDKTVFDNIAEGRDILQVGQFEIPARQYLGRFNFKGSDQSKIAGNLSG
                     GERGRLHLAKTLLGGGNVLLLDEPSNDLDVETLRALEDALLEFAGSVMVISHDRWFLD
                     RIATHILACEGDSKWVFFDGNYQEYEADKKRRLGEEGTKPKRIKYKPVTR"
     gene            complement(1936..2421)
                     /locus_tag="WIX18_000975"
     CDS             complement(1936..2421)
                     /locus_tag="WIX18_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HEZ5238102.1"
                     /translation="MADFKPDFAWLLKRPLCFLAFGFGSGLAPFAPGTFGTLAALPLA
                     FVLILLGIDGLLLAFLCIVLFMWGIRICAYAERETGVSDHGGIVWDEIVAMLFVLAFV
                     PFRWTWWLAAFVLFRLFDALKPPPVGWFDKNLHGGLGIMADDMAAAVMTLIVLRIAML
                     F"
     gene            complement(2414..3370)
                     /gene="thiL"
                     /locus_tag="WIX18_000976"
     CDS             complement(2414..3370)
                     /gene="thiL"
                     /locus_tag="WIX18_000976"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HEZ5238103.1"
                     /translation="MKEFDFIKRYLQTGTDNDVVLGIGDDAAIVRPREGFDLCFSADM
                     LLKDRHFFANVKPEDLAWKVLAVNVSDMAAMGAIPRWVLLSAALPELDEVWLKRFCGS
                     FFGLAKKFGVTLIGGDTTKGDMAFNVTIIGELSKGRALRRDAAVAGDDIWVSGRVGMA
                     AAALNCRLKRCVLPDDVFAECEQKLLRPEPRVGLGLALLPFARAAQDVSDGLAQDLGH
                     ILTASGVGAEIWADSLPSLSVLKDILPRAQWLSYTLAGGDDYELVFTAPESCRSRVLD
                     AAERCGVPVTRIGKINGGCRLKVLDADGRELELHSLGFDHFG"
     gene            complement(4209..4937)
                     /gene="rmpM"
                     /locus_tag="WIX18_000977"
     CDS             complement(4209..4937)
                     /gene="rmpM"
                     /locus_tag="WIX18_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding outer membrane protein
                     RmpM"
                     /protein_id="HEZ5238104.1"
                     /translation="MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNY
                     GECWKNAYFDKASQGRVECGDAVAAPEPEPEPEPAPAPVVVVEQAPQYVDETISLSAK
                     TLFGFDKDSLRAEAQDNLKVLAQRLGQTNIQSVRVEGHTDFMGSDKYNQALSERRAYV
                     VANNLVSNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIEPD
                     RRVDVKIRSIVTRQVVPAHNHHQH"
     gene            5301..6251
                     /locus_tag="WIX18_000978"
     CDS             5301..6251
                     /locus_tag="WIX18_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CysB family HTH-type transcriptional regulator"
                     /protein_id="HEZ5238105.1"
                     /translation="MKLQQLKYALEVYQHNLNVSEAAEALFTSQPGISKQIKLLEEEI
                     GIQIFIRSGKRVVSVSQPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHT
                     QARYALPLIVADFVKRYPKVNLTIKQGSPAAIARMVTSGEADLAIVTERIDDHPELGK
                     LPCYDWTHAVIVPNDHPLLECRNPLRIEDLARFPLITYEFAFNAGSSIARAFSKARLE
                     QPDVALAAADTDVLKTYVRLGLGVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIAL
                     RSDTYLRGYAYDFIQAFAPHLTREKVDRILYTPISEDFSI"
     gene            complement(6364..7098)
                     /gene="fnr"
                     /locus_tag="WIX18_000979"
     CDS             complement(6364..7098)
                     /gene="fnr"
                     /locus_tag="WIX18_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate/nitrate reduction transcriptional
                     regulator Fnr"
                     /protein_id="HEZ5238106.1"
                     /translation="MASHNTTHQMKTLCSSCSLRELCLPVGLLPNELSQLDAVIRQSR
                     RLKKGEYLFCVGEAFTSLFAIRSGFFKTTVASQDGRDQVTGFFMSGELIGMDGICSHV
                     HSCDAVALEDSEVCELPFTHIEELGQNIPSLRTHFFRMMSREIVRDQGVMLLLGNMRA
                     EERIAAFLLNLSQRLYSRGFAANDFILRMSREEIGSYLGLKLETVSRTLSKFHQEGLI
                     SVEHKHIKILNLQVLKKMVSGCSHAI"
     gene            7303..8724
                     /gene="hemN"
                     /locus_tag="WIX18_000980"
     CDS             7303..8724
                     /gene="hemN"
                     /locus_tag="WIX18_000980"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HEZ5238107.1"
                     /translation="MKIIQIQNNHNVNDDRPEFDRALIASLPASGPRYTSYPTADRFH
                     DGFREGEYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIE
                     YLEKEMELLAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSI
                     EIDPRKVSRDTVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAG
                     FKSVSVDLIYGLPHQTSESIKTTIDTVLSLDPDRLALYHYAHLPHVFKPQRRIDTAAV
                     PDSEEKLDMLQYCVQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYAD
                     CDLVAIGVSSIGKIGSTYSQNERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQD
                     LMCRFALDYRIYESMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIR
                     NIAMVFDYHLRHKETKAKYSQTV"
     gene            complement(9077..10651)
                     /locus_tag="WIX18_000981"
     CDS             complement(9077..10651)
                     /locus_tag="WIX18_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HEZ5238108.1"
                     /translation="MAQIQMSANVKTINAVFAAMLVGTVGYFIYWGLGYTHYNYAALF
                     IIATMFGVFMAFNIGGNDVANSFGTSVGAGTLTIPQALLIAAVFEVSGAVIAGGEVTN
                     TIRKGIVDLKGVDFEPIQFVFIMMSALLAAALWLLFASKKGLPVSTTHSIIGGIVGSA
                     VCMAVMNDAASGDLIRWGKLGGIGVSWVLSPVLGGAVSYFLFSRVKKNVLDYNAWAEG
                     TLKGIKQEKKAYKERHRLFFEGLSEAEKVEYATKMAHDAQIYDEPEFDPQELQSEYYR
                     GLYAFDNRKNNVDSYKALHSWIPFIASFGAMMISAMLIFKGLKNLHLGMSNVNSFLTI
                     FMIGAAVWMGTFVFAKSLKRKDLGKSTFQMFSWMQVFTACGFAFSHGANDIANAIGPF
                     AAIMDVLRTNSVAAQNVVPPIAMLTFGIALIVGLWFVGKEVIKTVGTSLAEMHPASGF
                     TAELSAASVVMGASLMGLPVSSTHILVGAVLGIGLVNRNANWKLMKPIGLAWVITLPA
                     AAVLSVVCYLVLQAVF"
     gene            10976..12076
                     /locus_tag="WIX18_000982"
     CDS             10976..12076
                     /locus_tag="WIX18_000982"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HEZ5238109.1"
                     /translation="METQLYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFTPYPDR
                     LRRQLLDLQDTGADELHRSRILSQELSRLYAQTAAELLCSQNLAPSDITALGCHGQTV
                     RHAPEHGYSIQLADLPLLAERTQIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDNRE
                     TRAVLNIGGIANISVLPSDAPAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNI
                     LPQLLDRLLAHPYFAQPHPKSTGRELFALNWLETYLDGGENRYDVLRTLSRFTAQTVC
                     DAVSHAAADARQMYICGGGIRNPVLMADLAEYFGTRVSLRSTAELKLDPQWVEAAAFA
                     WLAACWINRIPGSPHKATGASKPCILGAGYYY"
     gene            12195..>12340
                     /locus_tag="WIX18_000983"
     CDS             12195..>12340
                     /locus_tag="WIX18_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HEZ5238110.1"
                     /translation="MKTLLLLIPLVLTACGTLTGIPAHGGGKRFAVEQELVAASSRAA
                     VKEM"
BASE COUNT         3196 a         3474 c         3003 g         2667 t
ORIGIN      
        1 ctttggaaaa tccgaaatgg ttgccggggc ggcgatcccc tatcattatt atttttttgt
       61 ctatataatt tcaaagggat aagcggattt tatgaatcct gcccgatttt ggcaataccg
      121 gttcgcggat aaactggctt aaatcaaatt atcggttaaa atggccgtct gaaatttgtt
      181 tgatgaaaac gagaaaacca tgtcccaaca atacgtctat tctatgctgc gcgtgagcaa
      241 ggttgtgccg ccgcagaaaa ccatcattaa agatatttcc ctttctttct tccccggcgc
      301 gaaaatcggc ctgctcggtt tgaacggcgc gggcaagtcc accgtgctgc ggattatggc
      361 gggcgtggat aaggaatttg agggcgaagc cgtgccgatg ggcggcatca aaatcggcta
      421 cctgccgcaa gagcctgagc ttgatccgga aaaaaccgtg cgcgaggaag tggaaagcgg
      481 tttgggcgaa gtggctgccg cgcagaaacg tttggaggaa gtgtatgccg agtacgccaa
      541 tcctgatgcg gattttgacg cgttggcaga agagcagggc cgcttggaag cgattattgc
      601 ggcaggttcg tccacgggcg gcggtgcgga acacgaattg gaaatcgccg ccgacgcgct
      661 gcgcctgccg gaatgggatg ccaaaatcga taatttgtcc ggcggtgaaa aacgccgcgt
      721 tgccttgtgc aaactcttgt tgagcaagcc cgatatgctt ttgctggacg agccgaccaa
      781 ccacttggat gcggaatcgg tcgaatggct ggagcaattt ctcgtgcgct tccccggcac
      841 agtcgttgcg gtaacgcacg accgctactt cctcgacaac gccgccgaat ggattttgga
      901 actcgaccgc ggccatggta ttccgtggaa aggcaattac tcgtcttggc tggagcagaa
      961 agaaaaacgc ttggaaaacg aggcaaaatc cgaagcctcg cgcgtgaagg cgatgaagca
     1021 ggaattggaa tgggtgcgcc aaaatgccaa aggccgccaa gccaagtcca aagcgcgttt
     1081 ggcgcgtttc gaggaaatga gcaactacga ataccaaaaa cgcaacgaaa ctcaggaaat
     1141 tttcattccc gttgccgagc gtttgggtaa cgaagtgatt gaatttgtga atgtttccaa
     1201 atcgttcggc gacaaagtgc tgattgatga tttgagcttc aaagtgcctg cgggcgcgat
     1261 tgtcggcatc atcggcccga atggcgcggg taaatcgacg ctgtttaaaa tgattgcggg
     1321 caaagagcag cccgattcgg gcgaagtgaa aatcgggcaa accgtgaaaa tgagcctgat
     1381 tgaccaaagc cgcgaaggtt tgcaaaacga caaaaccgtg ttcgacaaca tcgccgaagg
     1441 ccgcgacatt ttgcaggttg gtcagtttga aattcccgcc cgccaatatt tgggacgctt
     1501 caatttcaaa ggcagcgacc aaagcaaaat cgccggcaac ctttcaggtg gcgaacgcgg
     1561 tcgtctgcac ttggcgaaaa ccttgttggg cggcggcaat gtattgctgt tggacgaacc
     1621 gtctaatgac ctcgatgtgg aaaccctgcg cgcgctggaa gacgcattgt tggaatttgc
     1681 cggcagcgtg atggtgattt ctcacgaccg ttggttcctc gaccgtattg ctacgcatat
     1741 cttggcttgc gaaggcgact ccaaatgggt gttcttcgac ggcaactatc aggaatacga
     1801 agccgacaag aaacgccgac tcggcgaaga aggcacgaaa ccgaaacgca tcaaatacaa
     1861 accggtaacg cgttaacctc cgaaacaatg ccgtctgaaa ggctttcagg cggcattttt
     1921 acaaggcagc accgtttaaa acagcattgc aatcctcaag acaatcaaag tcatcaccgc
     1981 agccgccata tcgtccgcca taatgcccaa accgccgtgc agattcttgt caaaccaacc
     2041 gacggggggc ggtttgagcg cgtcaaacaa gcggaataag acgaacgccg ccagccacca
     2101 cgtccacctg aacggcacaa acgccagcac aaacagcatg gcgacaatct cgtcccaaac
     2161 aatcccacca tggtcgctga cacccgtttc acgttccgca taagcgcaaa tgcgtatgcc
     2221 ccacataaac agcacgatac acaaaaaagc cagcagcagc ccgtctatgc cgagcaaaat
     2281 cagcacaaat gccaaaggca gtgccgccaa agtgccaaat gtacccggcg cgaacggagc
     2341 cagcccgctg ccgaaaccaa aagccaaaaa acacaacggt cgtttcaaca gccacgcaaa
     2401 gtcaggttta aaatcagcca aaatgatcga atcctaaaga atgtagttcc aattccctgc
     2461 cgtcggcatc taaaaccttc agacggcatc ctccgttgat tttgccgatg cgcgttaccg
     2521 gcacgccgca ccgttctgcc gcatcaagca cgcggctgcg gcaactttcc ggcgcggtaa
     2581 acaccagctc gtaatcgtcg ccgcccgcca aagtataaga cagccattgc gctcggggca
     2641 aaatatcttt caatacggat aaagacggca gcgaatcggc ccaaatttcc gcccccacgc
     2701 cggaagcggt caggatatgc cccaaatctt gcgcgaggcc gtctgaaaca tcctgcgccg
     2761 cccgggcaaa cggcaacagc gcaagcccca gcccaaccct tggctcgggg cggagcagct
     2821 tctgttcgca ttcggcaaac acgtcatccg gcaacacaca ccgtttcaga cggcagttca
     2881 aagccgccgc cgccataccg acacgccccg acacccaaat atcgtcgccc gcaaccgccg
     2941 catcacgccg caacgcccta cccttcgaca attcgccgat aatggttaca ttgaacgcca
     3001 tatcgccctt ggtcgtatcg ccgccgatta acgttacgcc aaactttttt gccaaaccga
     3061 aaaagctgcc gcaaaaccgt ttcagccata cctcatccaa ttcgggcaac gccgcgctca
     3121 gcaacaccca acgcggtatc gcacccatcg ccgccatatc cgaaacattg acggccaaaa
     3181 ccttccaagc caagtcttca ggtttgacat ttgcaaaaaa atgcctgtcc ttcaaaagca
     3241 tatccgcact gaaacacaaa tcgaagcctt cacgcgggcg gacaatcgcc gcatcgtcgc
     3301 ctatgcccaa tacgacatca ttatccgtgc ctgtttgcaa ataccgtttg atgaagtcaa
     3361 attctttcat atcccaaaat atccggcggg cgaatccaat ttaaatcata gcaaggcagc
     3421 aaaggccgta caaacaataa agcggctcat tcagtgtttc agcgtatttc acttttagct
     3481 ttgaccatac cgtacccgta tgcaccgacc accctgtttc aacacacaaa cggcatatca
     3541 aagcaccgca ctgcacgcca ccccgaatgc aaagcggcaa cttccgccac cgattaggct
     3601 caatcgctgc aactgacggg gtttcaaccg aaaagggctg atgataaaac catatccggc
     3661 atacagtgcc gcacacatct ggcacgattc catccatttc ccaatgaagg ggaaaggcgt
     3721 gaatttgtat gaattatccc tttcagggct tgatacagaa aggattccct ttctatgggc
     3781 aaacccacat cctaccgcct taaaatcaga gtttcaaccg atatagtgga ttaaatttaa
     3841 accagtacag cgttgcctta ccttagctca aagagaacga ttctctaagg tgctgaagca
     3901 ccaagtgaat cggttccgta ctatttgtac tatctgcggc ttcgtcgcct tgtcctgatt
     3961 tttgttaatc cactataaag cacggcaatg ggacacaaac ctgaatctga atctaaatct
     4021 gaatccgaat ccgaacctgc acctcgattc tgacgatagc cgtttcagaa aaccacccaa
     4081 aaaaacaaac cccgcaaaag cgggggtttg tttcacatca tcgatgccga ccgacgtttc
     4141 acgaatattg caacagtacc tggtacaaaa tccactaacc tcatgcatcg gcaagatatt
     4201 gcctagcctt agtgttggtg atgattgtgt gccggcacaa cctgacgggt tacgatgcta
     4261 cggattttca catccacacg gcggtcaggt tcgatacatg caatcagagc ctcacgtttt
     4321 ttggctttag agactttcgc acccagtttg gcaacttcgg cttcacaaac ttgagtcatt
     4381 tgcgcttgag attcgcccaa gccgacagca gaaattctag aaacaggtac gccgttgctg
     4441 accaggttgt ttgccactac gtatgcgcgg cgttcggaca gggcctgatt gtatttgtca
     4501 gaacccataa agtcggtatg gccttcgacg cggacagatt ggatattggt ttgacccagg
     4561 cgttgcgcca atactttcag gttgtcttga gcttcggcgc gcaatgaatc cttatcgaaa
     4621 ccgaacaggg ttttggcaga cagggaaatg gtttcatcaa catattgcgg agcctgctcc
     4681 acaacgacga caggcgcggg tgcgggttcg ggttctggct cgggttcggg ggcagcaacc
     4741 gcatcgccgc attctacgcg accttgactt gctttatcaa agtaggcgtt tttccagcat
     4801 tcgccatagt tgttgcgtac gatttcgttc gactggccgc ttacggtgta accctgaacg
     4861 gacgcctcgc ccgcaacagc agtgccggaa gcgagcaatg caacgaataa tgcgcttaat
     4921 ttcagctgtt tggtcatttt attccctcat taaatttgta cagcagatac agaagcaact
     4981 gctgaattgc caacatacag gccgctgtag aaacatggcg gcaaatcgga tatttcagtc
     5041 tccactataa agaagcaggg ggcggactgt caatactcaa cgcctgaaaa caaccgtaaa
     5101 acagcctgtt tcctgatagt ctatcatgcc gaaaaatcaa ttccgtgtca ttactttagg
     5161 gggatttttt ccatatcgca cgattgccgt tgcacaaaaa caacaaacac aacagcaaag
     5221 ccccataccg taccggcaag aaaatatgat aaattataaa caatgttcag ccacccgaca
     5281 cagacccaca ccgacccgcc atgaaattac aacaattgaa atacgcctta gaagtttacc
     5341 agcacaacct gaacgtttcc gaagcggccg aagccttgtt tacttcgcaa cccggcatct
     5401 ccaaacaaat caaattgctg gaagaagaaa tcggcattca gatttttatc cgcagcggca
     5461 agcgcgtggt ttcggtctcg cagccgggca aggtggtttt ggatattgcg gaacgtattt
     5521 tacgcgatgt acagaacatt aaaaatatcg gcagcgagtt taccggacag gacagcggtt
     5581 cgctgacggt tgccacgacg catactcagg cacgctatgc cctacccttg attgttgccg
     5641 attttgtgaa acgctatccg aaagtcaacc tgaccatcaa acaggggagc cctgccgcca
     5701 tcgcacgtat ggttacctca ggcgaggcgg acttggcgat tgttacggaa cggatagacg
     5761 accatcccga actgggaaaa cttccctgct atgactggac tcatgcggtt atcgtaccga
     5821 acgaccaccc cttgctcgaa tgcagaaacc ccctccgcat tgaagatttg gcgaggtttc
     5881 cgctgattac ttatgaattt gcattcaatg cgggcagcag catcgcgcgg gcattttcca
     5941 aagcccgttt ggaacagccg gatgtcgcat tggcggcggc ggatacggac gtattgaaga
     6001 cttatgtgcg cttgggtttg ggcgtgggac tgatggcgaa aatggcgtac aacccggata
     6061 cggacggcga tttgcagctt gtggatgcgg cacacctgtt cgagccgtcg ccgacgtgga
     6121 ttgctttgcg cagcgatact tatttgcgcg gatatgccta cgactttatc caagcgtttg
     6181 cgccgcacct gacacgcgag aaggtggata ggattctgta cacgcccatc agcgaggatt
     6241 tttcgattta ggcggctgcc ggttttcaga cggcactttg cggcagatac aacaaacagg
     6301 acagatgttt tcgtctgccc tgtgtttatt gagaatgccg tctgaaatgt tcgtacgggt
     6361 taatcaaatg gcgtgcgaac aaccggatac catcttcttc aacacctgca gattgaggat
     6421 cttgatgtgt ttgtgttcga cggaaatcaa tccttcctga tgaaatttag ataatgtgcg
     6481 gctgacggtt tcaagtttca gcccgagata actgccgatt tcttcgcggg acattcttaa
     6541 gatgaagtcg ttggcagcaa aacctcggga ataaaggcgt tgggaaaggt tcaacagaaa
     6601 ggcggcaatc cgctcttcgg cgcgcatatt gcccaacagc agcataacac cttggtcgcg
     6661 cacgatttca cgactcatca tgcggaaaaa gtgggtacgc aggctgggga tattctgccc
     6721 cagttcttcg atgtgggtaa acggcagttc gcacacttcg ctgtcttcca aggcgaccgc
     6781 gtcgcaactg tgcacatggg aacagatgcc gtccatgccg atgagttcgc ccgacataaa
     6841 gaaacccgtt acctgatcgc ggccgtcctg actggcgacg gttgttttga agaagcccga
     6901 acggatggca aagagcgagg taaaggcttc gccgacacag aacaggtatt cgcccttttt
     6961 caggcggcgg ctttgacgga tgacggcatc gagttggctg agctcgttgg gcagcagccc
     7021 gacaggcagg cagagttccc gcaaagaaca ggaagaacac agcgttttca tctgatgtgt
     7081 agtattatgc gaagccatac cgtacctttt tgtgcgcttt gccccatcat gattatagtg
     7141 gattaaattt aaaccagtac ggcgttgcct cgccttgtcc ttatttaaat ttaatccact
     7201 atatgtgctt attgacacat atcaagacag gtttatcata ctgtggcatt ctaccaaact
     7261 atccaaaatt tgactaacat cataaaaccg cacacacaca ccatgaaaat cattcagata
     7321 cagaacaatc acaatgtaaa cgatgaccgc cccgagtttg accgcgcgct gattgccagc
     7381 ctgcccgcca gcggcccgcg ctacacttcc taccctaccg ccgaccgttt ccatgacggt
     7441 ttccgcgaag gcgaatatat caaagcttta catttgcgcg gtatgggcgc gttaaacaaa
     7501 ccgctttccc tttacattca cattccgttc tgcaacacca tctgctacta ctgcggctgc
     7561 aacaaaatca tcaccaaaga caaaagccgc gccgatgcct acatcgaata tcttgaaaaa
     7621 gaaatggaac tgctcgctcc acatctgaac ggacggcacc agcttgccca actgcacttc
     7681 ggcggcggca cgccgacctt tttgagcgac gaacagatcg aacgtgtctt ccgcatgata
     7741 cgcaaacatt tcgagttaat ccccaccggc gaatactcca tcgaaatcga cccgcgcaaa
     7801 gtcagccgcg acaccgtcct catgctcggc agactcggct tcaaccgcat gagcatcggc
     7861 attcaggatt tcgaccccaa agtgcaggca gcggtcaacc gcatccaaag ttacgaagaa
     7921 accaaagaag tcatcgatgc ggcgcgcgaa gcggggttca aatccgtcag cgtcgatttg
     7981 atttacggcc tgccgcacca gacttcggaa agcatcaaaa ccaccatcga taccgttttg
     8041 tcgctcgatc ccgaccgcct cgccctttat cactacgccc acctgccgca cgtgttcaaa
     8101 ccgcaacgcc gcatcgatac cgccgccgtt cccgacagcg aagagaagct cgatatgctg
     8161 caatactgcg tccaaaccct aaccgaacgc ggctacgtct tcatcggcat ggatcatttc
     8221 gccaaacctg acgacgaact ctccatcgcc ctcaaagaag gcttcctcca gcgcaacttc
     8281 caaggctatt cgacctacgc ggattgcgat ttggtcgcca tcggcgtgtc gtccatcggc
     8341 aaaatcggca gcacctattc ccaaaacgaa cgcgacatcg atgcctacta tgccgccatc
     8401 gacgaaggca gactgcccat catgcgcggt tatcagctca atcaggacga catcctgcgc
     8461 cgcaacatca ttcaggattt gatgtgccgt ttcgcgctcg actatcggat ttacgaaagt
     8521 atgttcggca tcccgttcga ccgctacttc aaagacgaac tggcggattt ggaaaaactc
     8581 gccggtttgg gattggtgcg cctgaacagc cacgggctga ccgttacccc gaaaggacgc
     8641 ttcctcatcc gcaacatcgc catggtcttc gattaccacc tgcgccataa agaaaccaag
     8701 gcgaaatatt cgcaaacggt gtgattgcgt ctaacgtaca aatgccgtct gaaaggcttt
     8761 ttcagacggc attttgctgc cggcaggata agtgttttca agaacaggcg gcggcatatc
     8821 ataacgttcc gcacctttgt gtccgaccgt tccgaaacca agatatagtg gattaacaaa
     8881 aaccagtaca gcgttgcctc gccttgccgt actagctgta ctgtctgcgg cttcgtcgcc
     8941 ttgtcctgat ttttgttaat cactatacca aacggcatat cccgacagaa cagattgtgc
     9001 ataaggcaca agcccgcaca ttccatcaac aaaatgccgt ctgaacacgg gttcagacgg
     9061 catcagtatt ttacaatcag aatactgcct gtaaaaccaa gtagcagaca accgacaata
     9121 cggcggcggc aggcagggta atgacccacg ccaaaccgat gggcttcatc agtttccagt
     9181 tggcattgcg gttgaccaga ccgatgccga gtaccgcgcc gaccaagata tgcgtactgg
     9241 acacgggcag ccccatcagc gacgcgccca tcacgacgga tgcggcggac agttcggcgg
     9301 taaaacccga agcaggatgc atttccgcca aactcgtacc gacggtttta atcacctctt
     9361 taccgacaaa ccacaaaccg acaatcagcg cgataccgaa agtcagcatc gcaatcgggg
     9421 ggacgacatt ttgcgcggca acgctgttgg tacgcaaaac atccataatc gcggcaaacg
     9481 gaccgatggc gttggcgata tcgttcgcac cgtggctgaa tgcgaagccg caggcggtaa
     9541 agacctgcat ccatgaaaac atctgaaagg tcgatttgcc caagtcttta cgcttgaggc
     9601 ttttggcaaa cacaaacgtc cccatccaca ccgccgcgcc tatcataaag atggtcagga
     9661 agctgttgac gttgctcatc cccaaatgca ggtttttcaa gcccttgaaa atcagcatag
     9721 cggaaatcat catcgcgccg aacgaagcga taaagggaat ccaagaatgc agcgctttgt
     9781 aggaatcgac attgttttta cggttgtcga acgcataaag accgcggtaa tactccgatt
     9841 gcagctcttg cggatcgaat tcgggttcgt cgtaaatttg cgcgtcgtgc gccattttgg
     9901 tggcgtactc gactttttcg gcttcggaca aaccctcgaa aaacaggcgg tgccgttctt
     9961 tataggcctt tttttcctgc ttgatgccct tgagcgtgcc ttccgcccaa gcgttgtaat
    10021 ctaagacgtt tttcttgacg cgcgaaaaca ggaaatagga caccgcgccg cccaacacgg
    10081 gcgacaatac ccaagaaaca ccaataccgc ccagcttgcc ccaacgtatc aaatcgcccg
    10141 atgcggcatc gttcattacc gccatacata ccgcgctgcc gacaatgccg ccgataatgg
    10201 aatgggtggt agataccgga agcccttttt tcgaggcaaa caacagccac aacgccgccg
    10261 ccaaaagcgc ggacatcata ataaacacaa actgtatggg ttcgaaatca acacccttca
    10321 aatcgacgat gcctttgcgt atggtattgg ttacctcgcc gcccgcgatg accgcgccgc
    10381 tgacctcaaa taccgccgca atcagcaaag cctgcgggat ggtcagcgta cccgcaccga
    10441 cgctggtgcc gaaagaattg gcaacatcgt tgccgccgat gttgaacgcc ataaacacgc
    10501 cgaacatcgt ggcaataatg aataaggcgg cgtaattgta atgggtataa cccaagcccc
    10561 aataaataaa atagccgact gtacctacca gcatggcggc aaagacggcg ttgatggttt
    10621 taacatttgc gctcatttgg atttgagcca tggcaatctt cctttaatgt ggtggaaatc
    10681 atgagtgttg ccgacactgt actgctgcct ccggtcgaac tgccgtttcg ggatatggca
    10741 gacgcatcct tccttctgaa ccgcatccga atacccccaa acctgaccga atgcaaaact
    10801 gctgccggaa acggtttgta tgacacttct actactggat gttgcgggcg cattataata
    10861 tttttccatc cgtcttgaaa catttattta cactttattt acactgcggc ggcaaatcgg
    10921 tatacgagcg tcaatacacg ttaaaatggc gttttgcacc agtttgggag tgatgatgga
    10981 aacacagctt tacatcggca tcatgtcggg aaccagcatg gacggggcgg atgccgtact
    11041 gatacggatg gacggcggca aatggctggg cgcggaaggg cacgccttta ccccctatcc
    11101 cgacaggctg cgccgccaat tgctggattt gcaggacaca ggcgcagacg aactgcaccg
    11161 cagcaggatt ttgtcgcaag aactcagccg cctgtacgcg caaaccgccg ccgaactgct
    11221 gtgcagtcaa aacctcgcac cgtccgacat taccgccctc ggctgccacg ggcaaaccgt
    11281 ccgacacgcg ccggaacacg gttacagcat acagcttgcc gatttgccgc tgctggcgga
    11341 acggactcag atttttaccg tcggcgactt ccgcagccgc gaccttgcgg ccggcggaca
    11401 aggtgcgccg ctcgtccccg cctttcacga agccctgttc cgcgacaaca gggaaacacg
    11461 cgcggtactg aacatcggcg ggattgccaa catcagcgta ctcccctccg acgcacccgc
    11521 cttcggcttc gacacagggc cgggcaatat gctgatggac gcgtggacgc aggcacactg
    11581 gcagcttcct tacgacaaaa acggtgcaaa ggcggcacaa ggcaacatat tgccgcaact
    11641 gctcgacagg ctgctcgccc acccgtattt cgcacaaccc caccctaaaa gcacggggcg
    11701 cgaactgttt gccctaaatt ggctcgaaac ctaccttgac ggcggcgaaa accgatacga
    11761 cgtattgcgg acgctttccc gttttaccgc gcaaaccgtt tgcgacgccg tctcacacgc
    11821 agcggcagat gcccgtcaaa tgtacatttg cggcggcggc atccgcaatc ctgttttaat
    11881 ggcggatttg gcggaatatt tcggcacacg cgtttcctta cgcagcaccg ccgaactgaa
    11941 gctcgatccg caatgggtgg aagcagccgc atttgcgtgg ttggcggcgt gttggattaa
    12001 tcgcattccc ggtagtccgc acaaagcaac cggcgcatcc aaaccgtgta ttttgggcgc
    12061 gggatattat tattgagcgc aaatgccgtc tgaaagccat ttccgccgct cagacggcat
    12121 tttcgcccct tttgtttaca aacccttaaa atccatttac actcaaactc gttcaaaaca
    12181 aaacaaaccc tgccatgaaa accctgctcc tcctcatccc cctcgtccta accgcctgcg
    12241 gcacactgac cggcataccc gcccacggcg gcggcaaacg ctttgccgtc gaacaagaac
    12301 tcgtcgccgc atcgtcccgc gccgccgtca aagaaatgga
//
LOCUS       DAWITQ010000045        12240 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.045, whole genome shotgun sequence.
ACCESSION   DAWITQ010000045 DAWITQ010000000
VERSION     DAWITQ010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12240)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12240)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12240
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.045"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            244..981
                     /locus_tag="WIX18_000984"
     CDS             244..981
                     /locus_tag="WIX18_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HEZ5238111.1"
                     /translation="MIILDKVSKHYQTRDKTRFAAVEPTSLEIRDGEIFGLMGYSGAG
                     KSTLLRLINLLERPDTGKVNVCGQELTALDAAALRQARQNIGMVFQQFNLLNNRTVAG
                     NVAFPLEIAGWPSEKIKARVAECLEIVGLTERAGHYPAQLSGGQKQRVGIARALAPKP
                     QVILADEPTSALDPATTRSVLECLEDINKRFNVTIVIVTHEMSVIRRLCDRAALLDKG
                     KVVEIVEVRGNQIHARSDIGCELIRED"
     gene            984..1670
                     /locus_tag="WIX18_000985"
     CDS             984..1670
                     /locus_tag="WIX18_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEZ5238112.1"
                     /translation="MAGLTFEQTVSNIIGMKGEIVRALGETFVMVGLSTTFAVVFGTL
                     LGVLLFVTSSRQLHYNKPVNFLLDNLVNLMRAFPFVILMIAMIPATRAIVGSTIGPVA
                     ASLVLSVSGLFYFARLVEQNLREVPKGVIEAAAAMGAPPVAIVRKVLLNEARAGMVSS
                     ITVLAIGLLSYSAAAGMIGGGGLGDLAIRYGYYRYQTEVIVFIVALLVLLVILIQSTG
                     NALARKLDKR"
     gene            1829..2692
                     /locus_tag="WIX18_000986"
     CDS             1829..2692
                     /locus_tag="WIX18_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238113.1"
                     /translation="MKTFFKTLSAAALALILAACGGQKDSAPAASASAAADNGAEKKE
                     IVFGTTVGDFGDMVKEHIQPELEKKGYTVKLVEFTDYVRPNLALAEGELDINVFQHKP
                     YLDDFKKEHNLDITEVFQVPTAPLGLYPGKLKSLEEVKDGSTVSAPNDPSNFARVLVM
                     LDELGWIKLKDGINPLTASKADIAENLKNIKIVELEAAQLPRSRADVDFAVVNGNYAI
                     SSGMKLTEALFQEPSFAYVNWSAVKTADKDSQWLKDVTEAYNSDAFKAYAHKRFEGYK
                     SPAAWNEGAAK"
     gene            complement(2754..3323)
                     /locus_tag="WIX18_000987"
     CDS             complement(2754..3323)
                     /locus_tag="WIX18_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HEZ5238114.1"
                     /translation="MVRRLIIGISGASGFQYGVKALELLRAQDIETHLVVSKGAEMAR
                     ASETAYARDEVYALADFVHPIGNIGACIASGTFKTDGMLVAPCSMRTLASVAHGFGDN
                     LLTRAADVVLKERRRLVLMVRETPLNLAHLDNMKRVTEMGGVVFPPVPAMYRKPQTAD
                     DIVAHSVAHALSLFGIDTPDSAEWQGMAD"
     gene            3481..4341
                     /locus_tag="WIX18_000988"
     CDS             3481..4341
                     /locus_tag="WIX18_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEZ5238115.1"
                     /translation="MAKVKGGLGRGLDSLLANGADNSSGDRLTTVAVKDIRPGRYQAR
                     VQIDDEALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLTEIPAVI
                     KTISDETALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISN
                     SLRLLSLPEPVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERRSQ
                     AALQNKRPEPKKTAAADIGRLNDLLTEKLGVNAEIKTANHKKGRIILHFDTPETFDHI
                     LKQLGIDYRP"
     gene            4477..4815
                     /locus_tag="WIX18_000989"
     CDS             4477..4815
                     /locus_tag="WIX18_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238116.1"
                     /translation="MNTRIIVSAAFVALALAGCGSINNVTVSDQKLQERAAFALGVSP
                     NAVKISNRSNEGIRINFTATVGKRVSQCYVTSVISTIGVTTSDAICLGGGTHKGKSQC
                     NALLKAAGRC"
     gene            5183..5536
                     /locus_tag="WIX18_000990"
     CDS             5183..5536
                     /locus_tag="WIX18_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit I"
                     /protein_id="HEZ5238117.1"
                     /translation="MKQIIILQSAVLSICAAVAFAVWGFAGFLSAVGGGLSYLLPTFV
                     AVLLLKLFRGNPFLQSRMFVFGEILKVVLSLLSMLAVFAVWHQSLVFAPFLMGLLGVS
                     HLVFLVLLRVKDYGR"
     gene            5526..6392
                     /gene="atpB"
                     /locus_tag="WIX18_000991"
     CDS             5526..6392
                     /gene="atpB"
                     /locus_tag="WIX18_000991"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEZ5238118.1"
                     /translation="MAGETITAADYIKHHLQSLTSLSDVTQGQGLKNIADFSFINLDA
                     VFFAVLLGVIGSFLLWRGAKKATAGVPGRFQAAVEILFEFVDDMCKSIIHNEKSRKAV
                     APLGLTLFVWIFLMNAMDMLPVDLLPMVWQGITGNHHALLRVVPTADLNTTLALAVGV
                     LLICIYYNIKIKGLGGWFHELFSAPFGAKLAPANFLLNLVEFLSKTVSHGMRLFGNMY
                     AGELVFLLIALLGGAWAASGSVEVMDPILFVFHIIAGLAWAIFHILVITLQAFIFMAL
                     AFVYIGQAHDAH"
     gene            6449..6685
                     /gene="atpE"
                     /locus_tag="WIX18_000992"
     CDS             6449..6685
                     /gene="atpE"
                     /locus_tag="WIX18_000992"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HEZ5238119.1"
                     /translation="MGLIAIACGLIVALGALGASIGIAMVGSKYLESSARQPELIGPL
                     QTKLFLIAGLIDAAFLIGVAIALLFAFVNPFAGA"
     gene            6756..7226
                     /locus_tag="WIX18_000993"
     CDS             6756..7226
                     /locus_tag="WIX18_000993"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HEZ5238120.1"
                     /translation="MNINATLFAQIIVFFGLVWFTMKFVWPPIAKALDERAAKVAEGL
                     AAAERGKSDFEQAEKKVAELLAEGRNQVSEMVANAEKRAAKIVEEAKEQASSEAARIA
                     AQAKADVEQELFRARESLREQVAVLAVKGAESILRSEVDASKHAKLLDTLKQEL"
     gene            7231..7764
                     /locus_tag="WIX18_000994"
     CDS             7231..7764
                     /locus_tag="WIX18_000994"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEZ5238121.1"
                     /translation="MAEFATIARPYAKALFGLAQEKNQIESWLGGLEKLAAVVQEGKV
                     ASLIDRPETNASEKADILIDLVGLKDKELKNFVIVLAGQKRLSILPEVYAQYQDLTLS
                     FNHIKSAIIYSAYPLTDKQVGELAQMLNKRFDSELKISVEIEPELIGGIKVEVGDQVL
                     DLSVQGKLSALYTTMTN"
     gene            7775..9322
                     /locus_tag="WIX18_000995"
     CDS             7775..9322
                     /locus_tag="WIX18_000995"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEZ5238122.1"
                     /translation="MQLNPAEISDLIKAKIENLSVNAEVRTRGTVISVTDGIVRIHGL
                     SDAMQGEMLEFPGNTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRE
                     LVGRVVDALGRPIDGKGPINTTLTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVG
                     RGQRELIIGDRQTGKTAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAM
                     EHTIVVAATASEAAALQYIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLL
                     LRRPPGREAYPGDVFYLHSRLLERAARVNEHEVEKLTNGEVKGKTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGG
                     IRLALAQYRELAAFSQFASDLDEATRKQLEHGEVVTELMKQKQFSTLNTAEMALTLWA
                     INNGSYSDVPVAKALAFESEFLSFVRTQHPEVLEAVNASGAMSDESEKTLEAAMKSFK
                     SSYAYQA"
     gene            9347..10222
                     /gene="atpG"
                     /locus_tag="WIX18_000996"
     CDS             9347..10222
                     /gene="atpG"
                     /locus_tag="WIX18_000996"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HEZ5238123.1"
                     /translation="MAVGKEILTKIRSVQNTQKITKAMQMVSTSKMRKTQERMRLARP
                     YAEKVRMVMSHLAQTNTDHGIPLLESHREIRRVGFILITSDKGLCGGLNANVLKKFLA
                     QVQEYRNQGIEEEIVCLGSKGLMACQSIGLNVVASAVNLGDTPKMEMLLGPLTELFQR
                     YEKHEIDRIHLVYSGFVNTMRQEPRMEVLLPIGENVIGDSAPKSPFSWEYRYEPTALA
                     VLEYLVRRYLESVVYQALSDNMASEQAARMVAMKAATDNAGNAIKELRLVYNKSRQAA
                     ITTELSEIVAGAAAV"
     gene            10260..11657
                     /gene="atpD"
                     /locus_tag="WIX18_000997"
     CDS             10260..11657
                     /gene="atpD"
                     /locus_tag="WIX18_000997"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEZ5238124.1"
                     /translation="MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTLEVQQL
                     LGDGVVRAIAMGSSDGLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDT
                     DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMME
                     LINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRV
                     ALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTL
                     AEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLG
                     IYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDIIAILGMDELSDEDK
                     LTVMRARKIQRFLSQPFHVAEVFTGSPGKYVALRDTIAGFKAILNGEYDHLPEQAFYM
                     VGSIEEAVEKAKTLN"
     gene            11668..12090
                     /locus_tag="WIX18_000998"
     CDS             11668..12090
                     /locus_tag="WIX18_000998"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HEZ5238125.1"
                     /translation="MSIMQVEVVSSEQNIYSGEASFVVVPTVQGELGIYPRHEPIMSL
                     VRPGALRLTVPGEDKEVLVAVSGGVLEVQPDKVTILADVAVRSAEMDQARAEEAKKAA
                     EAGISQAKDDKALAEAHKALAAAIAQLKTLDYIRSHKK"
BASE COUNT         2999 a         3139 c         3161 g         2941 t
ORIGIN      
        1 ttcaattatt tgccgttttg gtgcgaaccg ctgcctttgc ccgtttcaga cggcattgtc
       61 cgaaatggtt gcctgcttcc tgccttattg acaaaaaaat gctttcccga taatatccta
      121 cgaaaattaa cctgccgatt tgacacagct tgcgggcata acagctaaag cgttccgaca
      181 attccagctt tatcttccgc gcccgttgtg tccgacatcg ggctttgttg tatgggaaag
      241 acaatgatta ttttggacaa ggtttccaag cattaccaaa cgcgcgacaa gacccgtttt
      301 gccgccgtcg agccgaccag cctcgaaatc cgcgacggcg aaatcttcgg gctgatgggc
      361 tattccggcg cgggcaaatc caccctgttg cggctgatta acctgttgga acgccccgac
      421 acgggcaagg tcaacgtctg cggacaagag ctgaccgcgc tcgatgccgc cgcattgcgt
      481 caggctcggc agaatatcgg catggtgttt cagcagttca acctgttgaa caaccgcacc
      541 gtcgccggca acgtcgcctt cccattggaa atcgccggat ggccgtctga aaaaatcaaa
      601 gcgcgcgttg ccgaatgtct cgaaatcgtc ggactgaccg aacgcgccgg ccactatccc
      661 gcccagcttt caggcgggca gaaacagcgt gtcggcatcg cccgcgcact cgcgcccaaa
      721 ccccaagtca tcctcgccga cgaacccact tccgccctcg accccgccac cacgcgcagc
      781 gtcttggaat gtttggaaga catcaacaaa cgattcaacg taaccatcgt catcgtaacc
      841 cacgaaatga gcgttatcag acgactgtgc gaccgcgccg ccctgttgga taaaggcaaa
      901 gtcgtcgaaa tcgtcgaagt acgcggcaac caaatccacg cccgatccga catcgggtgc
      961 gaactgattc gggaggactg aatatggcag gcttaacatt tgaacaaacc gtttccaaca
     1021 tcatcggtat gaaaggcgaa atcgtccgcg cattgggcga aaccttcgta atggtcggtt
     1081 tgtccaccac attcgccgtc gttttcggca cgttgctggg cgtgttgctc ttcgtaactt
     1141 ccagccgcca actgcattac aacaagccgg tgaacttcct gctcgacaac ctcgtcaacc
     1201 tcatgcgcgc cttccccttc gtcattttga tgattgcgat gatacccgcc acacgcgcca
     1261 tcgtcggcag caccatcggc ccggttgccg cctcgctggt gttgagcgtg tcgggattgt
     1321 tttattttgc ccgactggtg gaacaaaacc tgcgcgaagt ccccaaaggc gtaattgaag
     1381 ccgccgccgc gatgggtgcg ccgccggttg ccatcgtccg caaagtcctc ttaaacgaag
     1441 cgcgcgcggg catggtttcc agcattaccg tgcttgccat cgggcttttg tcatacagcg
     1501 cggcggcagg gatgataggc ggcggcggct tgggcgacct cgccatccgc tacggctact
     1561 accgctacca aaccgaagtc atcgtcttca tcgtcgccct cctcgtgctg ctggtcatcc
     1621 tgattcaaag caccggcaac gcattggcgc ggaaattgga taaacgttaa acccgaatgc
     1681 cgtctgaacg ccaaaacccc caccgctatc cgaaaaatgc tataaaatcc ccctgttcgc
     1741 ggcaaatgcc gtctgaacgc cgaatctgga cggcaggact ccctgcccgt catttttgtt
     1801 tgaaactgcc acaacatcag gagaaaatat gaaaaccttc ttcaaaaccc tttccgccgc
     1861 cgcactcgcg ctcatcctcg ccgcctgcgg cggtcaaaaa gacagcgcgc ccgccgcatc
     1921 cgcttctgcc gccgccgaca acggcgcgga gaaaaaagaa atcgtcttcg gcacgaccgt
     1981 cggcgacttc ggcgatatgg tcaaagaaca catccaaccc gagctggaga aaaaaggcta
     2041 caccgtcaaa ctggtcgagt ttaccgacta tgtgcgcccg aatctggcat tggctgaggg
     2101 cgagttggac atcaacgtct tccaacacaa accctatctt gacgacttca aaaaagaaca
     2161 caatctggac atcaccgaag tcttccaagt gccgaccgcg cctttgggac tgtacccggg
     2221 caagctgaaa tcgctggaag aagtcaaaga cggcagcacc gtatccgcgc ccaacgaccc
     2281 gtccaacttc gcccgcgtct tggtgatgct cgacgaactg ggttggatca aactcaaaga
     2341 cggcatcaat ccgctgaccg catccaaagc ggacattgcc gaaaacctga aaaacatcaa
     2401 aatcgtcgag cttgaagccg cgcaactgcc gcgtagccgc gccgacgtgg attttgccgt
     2461 cgtcaacggc aactacgcca taagcagcgg catgaagctg accgaagccc tgttccaaga
     2521 accgagcttt gcctatgtca actggtctgc cgtcaaaacc gccgacaaag acagccaatg
     2581 gcttaaagac gtaaccgagg cctataactc cgacgcgttc aaagcctacg cgcacaaacg
     2641 cttcgagggc tacaaatccc ctgccgcatg gaatgaaggc gcagccaaat aaggcagtcg
     2701 tataaaatga tgccgtctga accgtatccg tgttcagacg gcatttttgt cctttaatcc
     2761 gccattccct gccattccgc cgaatccggc gtatcgattc cgaacagcga caaagcgtgt
     2821 gcaacactgt gcgccactat gtcgtccgcc gtctgcggtt tgcggtacat cgcaggaaca
     2881 gggggaaaca ccacgccgcc catttccgtt acccgcttca tattgtccaa atgggcaagg
     2941 ttcagcggcg tttcgcgcac catcagcacc agccgccgcc tttccttcaa aaccacatcc
     3001 gccgcacgcg tcaagaggtt gtcgccgaag ccgtgcgcga ccgaggcaag cgtccgcatc
     3061 gaacaggggg cgaccagcat cccgtccgtt ttaaacgtac cgctggcaat gcacgccccg
     3121 atattgccga tcggatgcac gaagtccgcc aaggcatata cctcatctct cgcataagcc
     3181 gtttccgaag cgcgcgccat ctccgcacct ttcgatacca caaggtgcgt ttcgatatct
     3241 tgcgcgcgta aaagttccaa agccttcacg ccgtattgga aaccgctcgc cccactgatg
     3301 ccgattatca aacgccgtac catcatccgc ctttcccata aaaccgcctg caacggcaaa
     3361 ccggctatta tagtgaaaaa acagaaatcc gataaatacg gatacaaatt gtcggcaaca
     3421 cccaatatcc gataaaatat ccgatttaac atcctatctg aataggcacg ggagggcggt
     3481 atggcaaaag taaaaggcgg attggggcgc ggtttggatt cgctgctcgc caacggcgca
     3541 gacaacagca gcggcgaccg attgaccacg gttgcggtta aagatatccg gcccggccgc
     3601 tatcaggcgc gtgttcaaat cgatgacgaa gccttgcagg agctggcgga ttcgattaag
     3661 gcgcaaggcg tgatacagcc cgtcatcgtg cgcgaacacg gactgtcccg atacgaactg
     3721 attgcgggcg aacgccgttg gcgcgccgca cagattgccg gcctgaccga aatccccgcc
     3781 gttatcaaaa ccatcagcga cgaaaccgca ttggcaatgg gtttgatcga aaacctccag
     3841 cgcgaaaacc tcaaccccat cgaagaagca caaggcttga aacgccttgc cgacgagttc
     3901 ggactgaccc acgaaaccat cgcccaggcc gtcggtaaaa gccgaagcgc gatttccaac
     3961 agcctgcgcc ttttaagcct gcccgaaccc gtgcaggaaa tgctttacca acgccgcctc
     4021 gaaatgggac acgcccgcgc attgctgacc ctgcccgtcg tcgaacagct cgagttggcg
     4081 caaaaggccg tcaaaaacgg ctggtcggtg cgcgaagtcg agcgccgcag ccaagccgcc
     4141 cttcaaaaca aacgtcccga gcccaaaaag actgccgccg ccgacatcgg ccgcctgaat
     4201 gatttgctga ctgaaaaact gggtgtcaac gccgaaatca aaaccgccaa ccataaaaaa
     4261 ggcagaatca tcctgcattt cgacacgccc gaaaccttcg accatatctt gaagcagttg
     4321 ggcatagatt accgacctta attttgcggg atataccgtc tgaaatatag agaatagctt
     4381 tccagatttt aagtgggaaa tataattcta ttgacatttt ttctgcttca cgtaagaatc
     4441 gttttcctgt tttcattttt aattttcgag gaaattatga acacacgcat catcgtttcg
     4501 gctgcgttcg ttgcgttggc attagcaggt tgcggctcaa tcaataatgt aaccgtttcc
     4561 gaccagaaac ttcaggaacg tgccgcgttt gccttgggcg tcagcccaaa tgccgtaaaa
     4621 atcagcaacc gcagcaatga aggcatacgc atcaacttta ccgcaactgt gggtaagcgc
     4681 gtgagccaat gctatgttac cagtgtaatc agcacaatcg gcgttaccac ttccgatgca
     4741 atttgtttgg gaggcggaac gcacaaaggc aaaagtcaat gcaatgcttt gcttaaagcg
     4801 gcaggccgtt gctaatcctt tattcggaaa aggtcgtctg aaaatatttt cagacgatct
     4861 tttatttatt gagcaaattc cccaaactgc cgacaatccg accgataaac tgctacaatt
     4921 tcgcgttgat tttttattat ttccacgtaa agcaaacaaa tcacgtaaga acattaaaag
     4981 tgtaaagaaa ttgcggacaa actccttaat atcctgtaat tatatgtaat gtgtgttaga
     5041 atgacacctg tcgccgttat tcaggcggcg agcgcggcgg attgggatac gttgtttcac
     5101 aaagattaac tgtcgcttga cgtaataagg cttctaaatt atattagccg cgccccaaat
     5161 ccgaggcgga aacattccct ttatgaagca gattatcatc ctacaatccg ccgtattgtc
     5221 catatgcgcc gcagttgcct ttgctgtatg gggttttgcc ggattccttt cggcggtcgg
     5281 tggcggtttg tcctacctgc ttcccacgtt tgttgcagtt ttacttttaa aacttttcag
     5341 gggaaaccct ttcctgcaaa gcaggatgtt cgtcttcgga gagattttaa aagtagtgct
     5401 gtcgctgttg tccatgctcg ccgtatttgc tgtatggcat caatcgttgg tgttcgcccc
     5461 gtttctgatg gggctgctcg gtgtcagcca tttggttttt ttagtattgt tgagagtgaa
     5521 agattatggc aggtgaaacc attaccgctg ccgactacat caagcaccac ttgcagagct
     5581 tgaccagttt gtcggatgtt actcagggtc agggactgaa aaacattgct gatttttcgt
     5641 ttattaacct tgatgccgtc ttttttgccg tcctgttggg cgtaatcggc agcttcctgt
     5701 tgtggcgcgg tgcgaaaaaa gcaacggcag gcgttcccgg acgtttccag gctgccgtgg
     5761 aaatcttgtt tgagtttgtg gacgatatgt gtaagagcat cattcacaac gaaaagtcta
     5821 gaaaagccgt cgcgccgttg ggtctgacgc tgtttgtctg gatttttctg atgaacgcga
     5881 tggatatgct gccggtcgat ttgctgccga tggtatggca gggcattacc ggcaaccatc
     5941 acgccctgct gcgcgtcgta ccgactgccg atttgaacac cactttggca ctcgctgtcg
     6001 gcgtgttgct gatttgtatc tattacaaca tcaaaatcaa aggattgggt ggctggtttc
     6061 acgagttgtt cagcgcgccg ttcggtgcaa aactcgcacc tgcgaacttt ctgttgaatt
     6121 tggtcgagtt tctttctaaa accgtatccc acggtatgcg gttgttcggc aatatgtatg
     6181 caggcgagtt ggtattcttg ttgatagcct tgcttggcgg tgcttgggcg gcttccggca
     6241 gcgtcgaagt catggatccg attctgtttg tattccacat tattgccggt ttggcatggg
     6301 cgattttcca tattttggtg attaccctgc aggcgtttat tttcatggcg ttggcgttcg
     6361 tctatatcgg acaggcacat gatgcgcact gattttccta agtagtttgt ttttgtagtt
     6421 taacctttgt ttctttaagg agtttaaaat gggtttgatt gctatcgcat gtggtttgat
     6481 cgttgcattg ggtgcattgg gtgcctctat cggtatcgca atggtcggtt ctaaatattt
     6541 ggagtcttct gcccgtcagc ccgaactgat cggtccgctg caaaccaaac tgttcctgat
     6601 tgccggtttg attgatgccg cattcttgat tggtgtcgcc attgcactgc tgttcgcctt
     6661 cgttaacccg tttgcaggtg cataatcagg acggattcgt ccgttccgta caggcgcagc
     6721 ctgtttgatt aaccccagta cgaaggttaa gtaacgtgaa tatcaatgca acattattcg
     6781 ctcaaatcat cgtctttttc ggtttggtat ggtttaccat gaaattcgtg tggccgccga
     6841 ttgcaaaagc tttggatgag cgtgccgcaa aagtcgccga aggcttggct gccgccgagc
     6901 gtggtaaaag cgattttgag caggctgaaa aaaaggttgc agaactcttg gcagaagggc
     6961 gtaatcaggt ttccgaaatg gttgccaacg ccgaaaaacg tgccgccaaa attgtcgaag
     7021 aagccaaaga acaggcttct tccgaggcgg cgcgcattgc agctcaggca aaggccgatg
     7081 tggagcagga attgttccgc gcacgcgaat ccctgcgcga gcaggttgcc gtgttggctg
     7141 tcaaaggtgc cgaatctatt ttgcgcagcg aagtcgatgc ttccaaacac gcaaaactgc
     7201 tcgataccct gaaacaggag ctgtaatctt atggcagagt tcgcaacgat tgccagacct
     7261 tatgcaaagg cattgttcgg tctggctcag gaaaaaaacc aaattgagtc ttggttgggc
     7321 ggactggaaa aacttgcggc ggttgttcag gaagggaagg tggcttcatt gattgaccgt
     7381 cctgaaacga atgcttcaga aaaagcagat atcctcatcg atttggtcgg tttgaaagac
     7441 aaggagttga aaaactttgt tatcgtcttg gccgggcaga aacgtttgtc gatattgccg
     7501 gaagtatatg ctcaatatca agacttgacc ttatcattca accatatcaa atctgccatc
     7561 atttacagtg cctatccgtt gaccgacaaa caggtcggcg agttggcgca aatgctgaat
     7621 aagcgtttcg acagcgagct gaaaatctct gtcgaaatcg aaccggagct gattggcggc
     7681 ataaaagttg aagtgggtga tcaggttttg gatttgtctg tacaaggcaa attgagtgcc
     7741 ttgtacacga ctatgacgaa ttaggagagt tttcatgcag cttaatcctg ctgaaattag
     7801 cgatttgatt aaagccaaga tcgaaaatct gtctgtaaat gccgaagtgc gtacccgtgg
     7861 tacggtgatt tcggtaactg acggtatcgt tcgcatccat ggtttgtcag atgcaatgca
     7921 aggtgagatg ctcgaattcc cgggtaacac tttcggcttg gcgatgaacc tggagcgcga
     7981 ctccgtcggc gccgtagtgt tgggcgagta cgaacatatt aaagaaggcg acacggttac
     8041 ctgtaccggt cgtatcttgg aagtgccggt cggacgcgaa ctggtcggac gcgtcgttga
     8101 tgcattgggt cggcctatcg acggcaaagg cccgattaat acaactttga ccgcccctat
     8161 cgaaaaaatc gcaccgggcg tgattgcgcg caaatcggtt gaccagccga tgcaaaccgg
     8221 tctgaaggcg attgactcta tggttcctgt cggtcgcggt cagcgtgagt tgatcattgg
     8281 tgaccgtcaa accggtaaaa ctgccgtagc actggatgcc atcgtcaacc aaaaaggtac
     8341 gggtgttatc tgtatctatg tcgctatcgg tcaaaaagca tcttctattg ccaacgtggt
     8401 ccgcaaattg gaagagcatg gcgcgatgga acacacgatt gtggttgctg caactgcttc
     8461 tgaagccgct gcactgcaat acatcgcacc ttactccggt tgtacgatgg gtgaattctt
     8521 ccgcgaccgc ggcgaagatg ccttgattgt ttatgacgat ttgtccaaac aggctgtggc
     8581 ttaccgtcaa atttccctgc ttttgcgccg tccgcccggc cgcgaagcct atcccggcga
     8641 tgtgttctac ctgcactccc gtctgttgga acgtgcggca cgtgtcaatg aacacgaagt
     8701 ggagaaattg accaacggcg aagtaaaagg caaaaccggt tctctgactg ctttgccgat
     8761 tatcgaaacc caagcgggcg acgtatctgc tttcgttccg actaacgtca tttcgattac
     8821 cgacggtcag attttcttgg aaaccgacct cttcaacgcc ggtatccgtc ctgcaatcaa
     8881 tgccggtatt tccgtatccc gcgtaggcgg tgctgcacaa accaaagtga ttaaaaagct
     8941 gggtggcggt atccgtttgg cgttggcgca atatcgtgaa ttggcggcgt tctcgcaatt
     9001 tgcatccgat ttggatgaag ctacgcgcaa acaattggag catggcgaag tcgtaaccga
     9061 actgatgaaa cagaaacagt tcagtacgtt gaatacggct gaaatggctt tgaccctttg
     9121 ggcaatcaac aacggttcgt attctgatgt tccggttgcc aaagctctgg cttttgaatc
     9181 tgaatttttg agctttgtcc gtacccaaca tccggaagtt ttggaagccg tcaatgcttc
     9241 aggtgcaatg tccgacgaga gcgagaaaac gcttgaagca gccatgaaat ccttcaaatc
     9301 ttcttacgcc tatcaggcat aaggcttgaa gtgaaaggag tctgaaatgg cagtaggaaa
     9361 agagattctc accaaaatcc gcagtgttca gaatacccaa aagatcacta aagcgatgca
     9421 gatggtgtca acctctaaaa tgcggaagac tcaggaacgg atgcgtttgg cgcgtccgta
     9481 tgccgaaaaa gtgcgtatgg tgatgagcca tcttgcgcaa accaataccg atcatggtat
     9541 tccgttactg gaatctcatc gggaaatcag acgtgtcggt tttattttga ttacgtctga
     9601 taagggtttg tgtggcggtt tgaacgccaa cgtgctgaaa aagtttttgg cacaagttca
     9661 agagtatcgg aatcaaggta ttgaagagga aatcgtatgc cttggcagta aaggtctgat
     9721 ggcgtgtcag agcattggtc tgaatgtggt tgccagtgcc gtaaatttgg gcgatacccc
     9781 aaaaatggaa atgctgctcg gacctttgac agaactcttc caacggtatg agaaacatga
     9841 aattgacaga atccatctgg tgtattcggg ttttgtcaat accatgcgtc aagaaccgag
     9901 aatggaagta ttgctgccta tcggtgagaa cgtgattggc gattcagctc ccaaatcacc
     9961 gttcagctgg gaataccgct acgaaccgac tgcacttgca gtgttggaat atctggttcg
    10021 ccgctattta gagtctgtgg tttatcaggc gttgagcgac aatatggcat ccgaacaggc
    10081 agcccgcatg gttgccatga aagctgcaac agacaatgca ggcaatgcca tcaaagagtt
    10141 gcgtttggta tataacaaat cgcgtcaagc tgcgattacc acggaattgt cagaaattgt
    10201 agcaggtgcg gcggctgtct gatgccgtct gaatcctgta cggaaattag gatacgataa
    10261 tgagccaagg caaaatcgta caaattatcg gtgcggttgt tgacgtggaa tttccacgcg
    10321 acatgattcc gcgcgtttac gacgctttga aattagacga aaacggtctg actttggaag
    10381 tccaacagct tttgggcgac ggcgtagtcc gtgccattgc gatgggcagc tcggacggtt
    10441 tgaaacgcgg catgactgtg agcaataccg gtgcgcccat tactgtgccg gtaggtaaag
    10501 gtacgttggg acgcattgtc gatgtattgg gaacgcctgt tgacgaagca ggtccgatcg
    10561 ataccgacaa gagccgtgcc atccaccaag ctgcccctaa gtttgacgaa ctgtcttcca
    10621 caaccgaatt gctcgaaacg ggcattaaag tgattgactt gctgtgtccg tttgccaaag
    10681 gcggtaaagt aggtctgttc ggcggtgccg gtgtgggtaa aaccgtgaac atgatggaat
    10741 tgatcaacaa catcgccaaa gcgcacagcg gcttgtccgt gttcgcaggc gtgggtgagc
    10801 gtacccgcga aggtaacgac ttctaccacg agatgaaaga ttccaacgta ttggataaag
    10861 tggcaatggt ttacggtcag atgaacgaac ctccgggcaa ccgtttgcgc gtcgcattga
    10921 ccggtttgac catggcggaa tacttccgtg acgaaaaaga cgaaaacggc aaaggccgcg
    10981 acgtattgtt cttcgtggac aacatctacc gttacaccct ggctggtacc gaagtatccg
    11041 cattgttggg tcgtatgccg tctgcagtgg gctaccaacc gacattggca gaagaaatgg
    11101 gtcgtttgca ggagcgtatt acctctaccc aaaccggttc tattacttcc atccaagccg
    11161 tatatgtacc tgcggacgac ttgaccgacc cgtctccggc aacaacgttc gcccacttgg
    11221 acgcaaccgt cgtattgagc cgcgatattg cctctttggg tatttacccg gcagtcgatc
    11281 cgcttgattc tacttcgcgc caactggatc cgatggtatt gggtcaagag cactacgacg
    11341 tagcgcgcgg cgtacagtcc accctgcaga aatacaaaga attgcgcgac atcatcgcca
    11401 tcttgggtat ggacgaattg tctgacgaag acaaactgac cgtaatgcgt gcgcgtaaaa
    11461 tccaacgctt cctgtcccaa ccgttccacg ttgccgaagt gtttacaggt tctccgggca
    11521 aatatgtcgc cctgcgcgat accattgccg gcttcaaagc catcttgaac ggcgaatacg
    11581 accatctgcc cgaacaggca ttctacatgg tcggcagcat cgaagaagcg gttgagaaag
    11641 cgaaaacctt aaactgagga ggtcggcatg agcatcatgc aagttgaggt ggtcagtagc
    11701 gagcaaaaca tctattcggg cgaagccagc tttgtagtgg ttccgaccgt tcaaggtgag
    11761 cttggtattt acccgcgaca cgagccgatt atgagtttgg tgcggccggg ggctttgcgt
    11821 ttgaccgttc cgggcgagga taaagaggtt ttggttgctg tttccggcgg tgttttggaa
    11881 gtacagcctg ataaagtaac tatcttggcg gatgttgccg tccgcagtgc ggagatggat
    11941 caggcacgtg cggaagaggc gaaaaaagcc gcagaagcgg gcatttccca agctaaagac
    12001 gataaggctt tggcggaggc gcataaagca ttggctgctg cgattgcaca gctcaaaact
    12061 ttggactata tccgttcgca caagaaataa acttgtttgg tttggaaaag cacgaccgtt
    12121 tggtcgtgct ttttattttc cggatttaaa ttaaagactg tgtttggata tggcgttggc
    12181 aggcatagcc tgctttaagg tattcaatag ggcagcctgc cgcctaaccg aaacatatag
//
LOCUS       DAWITQ010000046        12150 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.046, whole genome shotgun sequence.
ACCESSION   DAWITQ010000046 DAWITQ010000000
VERSION     DAWITQ010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12150)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12150)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12150
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.046"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(229..1158)
                     /locus_tag="WIX18_000999"
     CDS             complement(229..1158)
                     /locus_tag="WIX18_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEZ5238126.1"
                     /translation="MDSIIELRHLKTLLALEETGSVSLAAKRVFLTQSALSHQIRMLE
                     NHYGAPLFERKSTPLRFTPVGERLLRLAHDLLPQVTDAERDLARIIEGEAGELRIAVE
                     CHTCFDWLMPAMGEFRPMWPQVELDIVSGFQADPVGLLLQHRADLAIVSEAEKQNDIS
                     FQPLFAYEMVGICAPDHPLAAKNVWTAEDFIGETLITYPVPDEMLDLPKKILIPKNIN
                     PPRRHSELTIAIIQLVASRRGIAALPYWTVMPYLEKGYVVHRQITADGLQSKLYAAIR
                     TEDTDKSYLNNFCQIIRERGFADLPGLSELEPV"
     gene            1289..2038
                     /locus_tag="WIX18_001000"
     CDS             1289..2038
                     /locus_tag="WIX18_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HEZ5238127.1"
                     /translation="MVLRRDFLTWCNETLQTALFKDYAPNGLQVEGREYIGKIVTSVT
                     ASRAAIDFAVEQKADLLLVHHGMFWKNELPTVTGWKKERIAALLRHDINMAGYHLPLD
                     AHPTLGNNAQLADRLGFATEKRFGEQNLLNSGSLKQAKTLGALAAHIETVLQRKPVVI
                     GKPEREIRRVAWCSGGAQGFFQTAIDEGVDLYLTGEISEAQYHLANETGTAFISAGHH
                     ATERYGVRALAESAAEVFGLEVCHFDENNPA"
     gene            2161..2742
                     /gene="petA"
                     /locus_tag="WIX18_001001"
     CDS             2161..2742
                     /gene="petA"
                     /locus_tag="WIX18_001001"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HEZ5238128.1"
                     /translation="MDNQEINNGRRRFLTLATCGAGGVAALGVATPFVASFFPSEKAK
                     AAGAAVEVDVSKIEAGQLLTAEWQGKPIWVLNRTDQQLKDLKGLNGELTDPNSDAEQQ
                     PEYAKNETRSIKPNILVAIGICTHLGCSPTFRPDIAPADLGADWKGGFFCPCHGSKFD
                     LAGRVYKGVPAPTNLVVPPYKYLSDTTILVGED"
     gene            2761..4110
                     /locus_tag="WIX18_001002"
     CDS             2761..4110
                     /locus_tag="WIX18_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HEZ5238129.1"
                     /translation="MANQTNSKAKALLGWMDARFPLSKMWNEHLAQYYAPKNFNFWYY
                     FGSLALLVLVIQIVSGIFLTMNYKPDGNLNAYHLPAAFTAVEYIMRDVSGGWIIRYMH
                     STGASFFFIVVYLHMFRGLIYGSYKKPRELVWIFGSLIFLALMAEAFMGYLLPWGQMS
                     FWGAQVIINLFSAIPVIGPDLSTWIRGDFNVSDVTLNRFFALHVIAVPLVLLGLVVAH
                     IIALHEVGSNNPDGVEIKKNKDENGIPRDGIPFHPYYTVKDILGVVVFLIVFCAVLFF
                     APEGGGYFLEAPNFDAANALKTPPHIAPVWYFTPFYAILRAIPSFLGTQVWGVIGMGA
                     AVVLIALLPWLDRGEVKSVRYRGPIFKTALVLFIISFIGLGILGAMVATDTRTLVARI
                     LSFVYFAFFLGMPFYTKLDKNKPVPERVTMSTAKQKIMFFVYVGITAVGAYLFATNI"
     gene            4125..4913
                     /locus_tag="WIX18_001003"
     CDS             4125..4913
                     /locus_tag="WIX18_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HEZ5238130.1"
                     /translation="MKQAMKNWFAALLLAVPMGAAFASGGHAHYEKVDIDLRDQVSLQ
                     RGAQIFTNYCLSCHSASGMRFNRLKDIGLTDEEIKKNLMFTTDNVGDVMHSAMNPKDA
                     AKWFGAAPPDLTLIARSKGADYLYAYMRGFYKDPTRPSGWNNTVFDKVGMPHPLWEQQ
                     GVQAVELDAKGQPVMVKDEHGEMKPKLYWESTGLHSRRLPNGKVIQKEYDAYVRDLVN
                     YLVYMGEPAQLQRKRIGYVVMIFLFAVMLPLAYFLKKEYWKDVH"
     gene            5252..7036
                     /gene="rmuC"
                     /locus_tag="WIX18_001004"
     CDS             5252..7036
                     /gene="rmuC"
                     /locus_tag="WIX18_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HEZ5238131.1"
                     /translation="MELMTVLLPLAALVSGVLFTWLLMKGRFQGEFADLNAQLAEKAA
                     RCDFVEQAHAEIASELAVLDGKYRHLQDENYALGNRFSAAEKQIAHLQEKEAESVRLK
                     QSYIELQEKAQGLAVENERLATQLGQEQKAFADQYALERQIRQRIETDLEESRQTVRD
                     VQNDLSDVGNRFAAAEKQIAHLQEKEAEAERLRQSHIDLQEKAQGLAVENERLTTQIE
                     QERLASEEKLSLLGEARKSLSDQFQNLANTILEEKSRRFTEQNREQLHQVLNPLNERI
                     HGFGELVRQTYDKESRERLTLENELKRLQGLNAQLHSEAKALTNALTGTQNKVQGNWG
                     EMILETVLENSGLQKGREYVVQAAAVRKEEDGGTRRLQPDVLVNLPDNKQIVIDSKVS
                     LTAYVRYTQAADADTAARELAAHVASIRAHMKGLSLKDYTDLEGVNTLDFVFMFIPVE
                     PAYLLALQNDAGLFQECFDKRIMLVGPSTLLATLRTVANIWRNEQQNQNALAIADEGG
                     KLYDKFVGFVQTLESVGKGIDQAQNSFQTAFKQLAEGRGNLVGRAEKLRLLGVKANKQ
                     LARDLTERANETTALSESLEYAAEDEAV"
     gene            complement(7243..7875)
                     /locus_tag="WIX18_001005"
     CDS             complement(7243..7875)
                     /locus_tag="WIX18_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEZ5238132.1"
                     /translation="MTLRYEILSVTPFRQNCTLIWDDESGEAVLTDVGGDVPFLLQAL
                     ANRKLTLTAIWLTHGHLDHAGGVVEMLKTHKVPVLGPHPDDEFLLQSLPQTTAQYGFP
                     VSPAFAPNHWLEEGETLKVGRYAFQVLHIPGHTPGHVVFYCAEAELLIAGDVLFYETI
                     GRTDFPRGNHADLINNIRNKLFALPETVQVVAGHGRMTSIGHEKRHNPFF"
     gene            7966..8790
                     /locus_tag="WIX18_001006"
     CDS             7966..8790
                     /locus_tag="WIX18_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HEZ5238133.1"
                     /translation="MIKKTIGGIIPIFTAVFIPASAGAADLMLAQEYKDQEIAGWAMS
                     EKLDGVRAYWDGKHLISRQGYAFTPPKGFTAQFPPYPLDGELYSGRGQFEQISATVRS
                     VSSDWRGIRLHVFDVPKAQGNLYQRLAVATQWLKTHPNAPITIIPQTKVRDRQHAMDF
                     LKQIEAQGGEGVMLRQPESRYSGGRSSQLLKLKSQYDDECTVTRHYEGKGRNAGRLGA
                     VGCKNRHGEFRIGSGFKDKDRDNPPKIGTLITYRYRGFTRKGTPKFATFVRVRTDR"
     gene            8859..9422
                     /locus_tag="WIX18_001007"
     CDS             8859..9422
                     /locus_tag="WIX18_001007"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine-guanine phosphoribosyltransferase"
                     /protein_id="HEZ5238134.1"
                     /translation="MTDLETKRLETQAMLENADLLFDQGQCRAALQKVADEITRDLGG
                     KYPLLLPVMGGAVVFTGQLLPLLRFPLDFDYVHVSRYGDKLEGGAFNWKRMPDAEQIR
                     GRHVVVLDDILDEGHTMSAIQAKLLEMGAASCRAAVFANKLIDKPKPIRADYVGLDVP
                     NRYVFGYGMDAAGCWRNLGEIYALDGK"
     gene            9504..9941
                     /locus_tag="WIX18_001008"
     CDS             9504..9941
                     /locus_tag="WIX18_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEZ5238135.1"
                     /translation="MIGLLIITHETIGEAYRKLAHHFFPGGLPENVRILGVQPTEDQD
                     DIINNAIAALQEFPDNDGVLIMTDIFGATPCNAARRLVRENKSAILTGLNAPMMVKAV
                     QYSPAAEDLAAFTECVREAAVKGIFAITSAPEDLVCRRSGDAV"
     gene            10010..10279
                     /locus_tag="WIX18_001009"
     CDS             10010..10279
                     /locus_tag="WIX18_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HEZ5238136.1"
                     /translation="MLKQSIEIINKLGLHARASSKFTQTASQFQSEVWVTKNGSRVNG
                     KSIMGLMMLAAAKGTVIELETDGADEAEAMRALTDLINGYFGEGE"
     gene            10279..12054
                     /gene="ptsP"
                     /locus_tag="WIX18_001010"
     CDS             10279..12054
                     /gene="ptsP"
                     /locus_tag="WIX18_001010"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HEZ5238137.1"
                     /translation="MSIVLHGVAAGKGIAVGCAHLIARGTEEVPQYDVAEADTDAEAE
                     RFDAAVKATRKELEQLRSAIPENAPTELGAFISLHLMLLTDVTLSREPVDILREQKIN
                     AEWALKQQSDKLAAQFDNMDDAYLRERKQDMLQVVRRIHNNLIGQGNELEVADNLFDE
                     TVLIANDLSPADTVLFKEQRIAAFVTDAGGPTGHTAILGRSLDIPSVVGLHNARKLIT
                     EGETVIVDGINGVLIIAPDESVLNEYRRRAREYRSHKRDLNKLKKTAAATADGVCIEL
                     VGNIESAEDVKPLHNLGADGIGLFRSEFLYLNRDTMPSEDEQYEVYSAIVKKMKGKSV
                     TIRTVDLGVDKNPRWFGKNSTPNGSLNPALGMTGIRLCLAEPVMFRTQMRAILRAAAH
                     GPVRMMWPMITSVSEVRQCLIHLDTAQRQLAERGDAFGKVGIGCMIEIPSAALTVGSI
                     LKLVDFISVGTNDLIQYILSVDRGDDSVSHLYQPGHPAVLKMLQHVIRTANRMDKDVS
                     VCGEMAGDTAFTRVLLGMGLRRFSMNPNNILPVKNIILHSNVGQLESDIVKVIRCEDE
                     EKSEKLIKQINSVSVEEEADFKGRK"
BASE COUNT         2969 a         3031 c         3411 g         2739 t
ORIGIN      
        1 gggtaaaatt aggaggtatt tggtacgaaa acagccgaaa tcctgtgttt gggtttcggc
       61 tgtcgggagg gaaaggaatt ttgcaaaggt ctcagattgg gcaaaaatca aaaacagtat
      121 agtggattaa caaaaatcag gacaaggcga ggcaacgctg tactggtttt tgttaatcca
      181 ctatacatga aaaaatagaa aaactgccgg gtatggttga ataaggggtc agaccggttc
      241 caattcgctc agtccgggca aatctgcaaa accgcgttcg cgtatgattt ggcaaaaatt
      301 gttcagatag ctcttgtccg tatcttcggt acggatggcg gcatacagtt tgctttgcaa
      361 tccgtcggca gtaatttggc ggtggacgac atagcctttt tcaaggtagg gcatgactgt
      421 ccaataggga agggcggcaa tgccacgtct gctggcaacc agttggataa tggcgatggt
      481 cagttcgctg tgtcggcgcg gcgggttgat gtttttcgga atcaggattt ttttgggcaa
      541 atccagcatc tcgtcgggaa cgggataagt aatcagggtt tccccgataa agtcttccgc
      601 cgtccaaacg tttttggcgg caagcggatg gtctggtgcg caaatgccga ccatttcgta
      661 ggcaaacagc ggttggaaag aaatatcgtt ttgtttttcc gcttcggaaa caatggcaag
      721 gtcggcacgg tgttgcagca gcagtccgac gggatccgct tggaatcccg atacgatatc
      781 caattcgact tggggccaca tcgggcggaa ttcgcccatg gcgggcatca gccagtcgaa
      841 acaggtatgg cattcgacgg caatccgcaa ttctcctgcc tctccttcta taatgcgtgc
      901 caaatcacgt tctgcatcgg taacttgagg caacaggtcg tgagcgaggc gtaacagcct
      961 ttctccaacc ggggtaaagc gcaagggcgt ggattttcgt tcgaacaacg gtgcgccgta
     1021 gtggttttca agcatacgga tttggtggga aagtgcagat tgggtaagga aaacccgttt
     1081 ggcggcaagg gagacgctgc cggtttcttc aagtgccagc agggtcttga ggtggcgcag
     1141 ttcgatgatg gaatccatga ggtttcagac ggcatattga accggcgcat attaaaataa
     1201 ttcatatgcg ggtgcaaatc ggaaaaatgt gaattccaga cattttgcga ttagaatgcc
     1261 cgcttgttta aagcgattag gaaaaaagat ggtattgcgc agggattttc tgacttggtg
     1321 taatgaaaca ttgcagacag cgttgtttaa agattacgcc cctaacggtt tgcaggttga
     1381 agggagggaa tatatcggga aaatcgttac gtcggtaacg gcaagcaggg cagcgattga
     1441 ttttgctgtg gagcagaagg cagatttgct tttggtacat cacggtatgt tctggaaaaa
     1501 cgagttgccg accgttactg gttggaaaaa agaacggatt gccgcactgt tacggcacga
     1561 catcaatatg gcaggctacc atctgcccct ggatgcacat cccacactgg gcaacaatgc
     1621 ccaactcgcc gacagattgg gttttgcgac agaaaaacgg ttcggcgaac aaaacctgct
     1681 caactcgggc agcctgaaac aagccaagac actcggcgca ttggcggcgc atattgaaac
     1741 agttttgcaa cgtaagcctg tcgtcatcgg caaacccgaa cgcgaaatcc gacgggttgc
     1801 atggtgcagc ggcggggcgc aggggttttt tcagacggca atagacgaag gtgtcgatct
     1861 gtatttgacg ggggaaatct ctgaagctca ataccacctt gccaatgaaa cgggtacggc
     1921 tttcatttcg gcagggcatc acgcgacgga acgttacggc gtacgcgcgc tggcagaatc
     1981 ggcggcagag gttttcgggt tggaagtgtg ccattttgac gaaaacaatc cggcttgagt
     2041 cttgagaaat atcataaaac tttaccttat tttaaataat gctttgagta tcactgcaaa
     2101 ctgggtaaaa ttgcaacgtt taatggctcg gtattcccaa aatattagga cgactgaata
     2161 atggataatc aagaaatcaa caacggccgc cgccgtttcc tgacactcgc gacctgcggc
     2221 gcgggcggag tggcagcatt gggtgtggca acgccgtttg tggccagttt tttcccttcg
     2281 gaaaaagcca aggctgccgg tgctgccgtc gaggtggatg tcagtaaaat cgaagcgggt
     2341 cagctgctga ccgccgagtg gcaaggcaaa ccgatttggg tgctcaaccg tacagatcag
     2401 cagcttaaag acctgaaagg cctgaacggc gaacttaccg atcccaattc cgatgcggaa
     2461 cagcagccgg agtatgctaa aaacgagacc cgttcgatta agccgaacat ccttgtcgcc
     2521 atcggtatct gcacccattt gggctgctcg cccaccttcc gtcccgacat tgcccccgcc
     2581 gatttgggtg cagactggaa aggcggcttc ttctgcccct gccacggttc gaaattcgac
     2641 ttggccggcc gcgtatataa aggtgttcct gccccgacca acctggttgt cccgccatat
     2701 aaatacttga gcgacacaac tatcttggtg ggcgaagact aagaataagg aacgataatt
     2761 atggcaaacc aaaccaatag caaagcaaaa gcattgttag gctggatgga cgctcgtttc
     2821 cccctgtcta aaatgtggaa tgagcatttg gctcaatact acgcaccgaa aaactttaat
     2881 ttttggtact acttcggctc tttggccctg cttgtcctcg tgattcaaat cgtcagcggc
     2941 attttcctga ccatgaacta caaacccgac ggcaacctga acgcctacca tctgcctgct
     3001 gcctttactg cagtcgagta catcatgcgc gacgtgtccg gcggttggat tatccgctac
     3061 atgcattcca ccggcgcatc tttcttcttc attgttgttt atctgcacat gttccgtggt
     3121 ttgatttacg gttcgtacaa aaaaccccgt gagttggtgt ggattttcgg ttctctgatt
     3181 ttcttggcat tgatggcgga agcctttatg ggctacctgc tgccttgggg tcagatgtcc
     3241 ttttgggggg cgcaggtaat tattaacctg ttctccgcca tccctgttat cggtccggat
     3301 ttgtccactt ggattcgcgg cgacttcaac gtttccgacg ttaccctgaa ccgtttcttt
     3361 gccctgcacg ttatcgcggt acctctggta ttgctcggct tggttgtggc gcacatcatc
     3421 gccctgcacg aagtgggttc taacaaccct gacggcgttg aaatcaagaa aaacaaagac
     3481 gaaaacggta tcccgcgcga cggtatccca ttccatcctt actataccgt taaagacatc
     3541 ttgggtgtgg ttgtattcct gattgtcttc tgtgccgtat tgttcttcgc accggaaggc
     3601 ggcggctact tcctcgaagc gccgaacttc gatgcggcaa atgcgctgaa aacacccccg
     3661 cacattgcgc cggtatggta tttcacaccg ttctacgcca ttttgcgtgc gattccctcg
     3721 ttcttgggaa cgcaggtttg gggtgtaatc ggtatgggcg cggcggtcgt gttgattgcc
     3781 ctgctgcctt ggctggatag gggcgaggtg aaatccgtcc gttaccgcgg cccgattttc
     3841 aaaaccgcat tggtcttgtt catcatttcc tttatcggtt tgggtatttt gggcgcgatg
     3901 gtggcaaccg atacgcgtac tttggtcgcg cgcatcctgt ccttcgtcta tttcgcattc
     3961 ttcctgggta tgccgttcta taccaagctg gataaaaaca aaccggttcc cgaacgcgta
     4021 accatgagca ccgccaaaca aaaaatcatg ttctttgttt acgtcggcat taccgccgtg
     4081 ggtgcttacc tgtttgcaac caacatctga tgagggcagt caaaatgaaa caagctatga
     4141 aaaattggtt tgctgccttg ctgttggcag tacccatggg tgcggcattt gcttcgggcg
     4201 gtcatgcaca ctatgagaaa gtcgatatcg atttgcgcga ccaagtcagc ctgcagcgcg
     4261 gcgcacaaat ctttaccaac tattgcctgt cctgccactc ggcaagcggt atgcgtttca
     4321 accgtttgaa agacatcggt ttgactgacg aagaaatcaa gaaaaacctg atgtttacca
     4381 ccgataatgt cggcgatgtc atgcattcgg cgatgaaccc gaaagatgcg gcaaaatggt
     4441 ttggtgctgc tccgcccgat ttgacattga ttgcgcgttc caaaggtgca gactaccttt
     4501 acgcttatat gcgcggcttc tataaagatc cgacccgtcc gagcggctgg aacaatactg
     4561 tattcgataa agtcggtatg ccccacccgt tgtgggaaca gcaaggcgtt caagccgttg
     4621 agttggatgc caaaggtcag ccggttatgg taaaagacga acacggcgag atgaagccta
     4681 agctgtattg ggaatctacc ggtttgcaca gccgccgtct gcctaacggc aaagtgatcc
     4741 aaaaagagta cgacgcatat gtacgcgatt tggtcaatta ccttgtgtac atgggcgaac
     4801 ctgcacaact gcaacgcaaa cgtataggct atgtcgtgat gattttccta tttgcggtta
     4861 tgctgccttt ggcgtatttc ctgaaaaaag aatattggaa agacgtacac taagcgtttg
     4921 gaacaaaagg gcaaatcctt tagggtttgc ccttttttca ttttgcctgc cgtttgaaaa
     4981 gcctgaatcc gtatgccgtc tgaacatagc tgcaacattt cagacggcat cattctaaaa
     5041 atgtcagaca tcgggaactt aatcagggtt tgtggcagat tgatattgaa ttaggaaaag
     5101 gtctgaaacc gcaagcagca tggtaaggcg atgtcgaaca ggtttaaagc caatccgcta
     5161 tattttttgg agctatgtcg aacaaacagg tagaatcgga ataagcggcg gttttgtccg
     5221 gtgtgaaaat gtttgaatat taggatgatt gatggaactg atgactgttt tgctgccttt
     5281 ggcggcgttg gtgtcgggcg tgttgtttac atggttgctg atgaagggca ggtttcaggg
     5341 cgagtttgcc gatttgaacg cgcaactggc ggaaaaggcg gcaagatgtg attttgtcga
     5401 acaggcacac gcagaaattg catcggaatt ggccgttttg gacgggaaat accgacattt
     5461 gcaggacgaa aattatgctt tgggcaaccg tttttccgca gccgaaaagc agattgccca
     5521 tttgcaggaa aaagaggcgg aatcggttcg gctgaagcag tcgtatatcg agttgcagga
     5581 aaaggcgcag ggtttggcgg ttgaaaacga acgtttggca acccagctcg gacaggagca
     5641 gaaggcgttt gccgatcaat atgccttgga acgccaaatc cgccaaagaa tcgaaaccga
     5701 tttggaagaa agccgccaaa ctgtccgcga cgtgcaaaac gacctttccg atgtcggcaa
     5761 ccgttttgcc gcagccgaaa aacagattgc ccatttgcag gaaaaagagg cggaagcgga
     5821 gcgtttgagg cagtcgcata tcgatttgca ggaaaaggca cagggtttgg cggttgaaaa
     5881 cgaacgtttg acaacgcaaa tcgaacagga acgccttgct tctgaagaga aactgtcctt
     5941 actgggcgag gcgcgcaaga gtttgagcga tcagtttcaa aatcttgcca acacgatttt
     6001 ggaagaaaaa agccgccgtt ttaccgagca gaaccgcgag cagcttcatc aggttttgaa
     6061 cccgttaaac gaacgcatcc acggtttcgg cgagttggtc aggcaaacct atgataaaga
     6121 atcgcgcgag cggctgactt tggaaaacga attgaaacgg cttcaagggt tgaacgcgca
     6181 gcttcacagc gaggcaaagg ctttaaccaa cgcgctgacc ggtacgcaga ataaggttca
     6241 gggaaattgg ggcgagatga ttctggaaac ggttttggaa aattccggcc ttcagaaagg
     6301 gcgcgaatat gtggtgcagg cggcggctgt ccgcaaagaa gaagacggcg gcacgcgccg
     6361 ccttcagccc gacgttttgg ttaacctgcc cgacaacaag cagattgtga ttgattccaa
     6421 ggtttcgctg acggcttatg tgcgctatac gcaagcggcg gatgcggata cggcggcgcg
     6481 cgaactggcg gcacacgttg ccagcatacg cgcgcatatg aaaggcttgt cgctgaagga
     6541 ttacaccgat ttggaaggtg tgaacacatt ggatttcgtc tttatgttta tccctgtcga
     6601 accggcctac ctgctggcgt tgcagaatga cgcgggattg ttccaagagt gtttcgacaa
     6661 acggattatg ctggtcggcc cgagtacctt gttggcaacc ttgcggacgg tggcgaatat
     6721 ttggcgcaac gaacagcaaa atcaaaacgc gctggcgatt gcggacgaag gcggcaagct
     6781 gtatgacaag tttgtcggtt tcgtacagac gctcgaaagc gtcggcaaag gcatcgatca
     6841 ggcgcaaaac agctttcaga cggcattcaa gcaacttgcc gaagggcgcg ggaatctggt
     6901 cggccgcgcc gagaaactgc gtctgttggg tgtgaaggca aacaagcagc ttgcacgcga
     6961 tttgaccgaa cgtgccaatg aaacaacggc gttgtcggaa tctttggaat atgcggcaga
     7021 agatgaagca gtctgacttg tgcggaaaaa tattgtttca gcaggggcgg gaatgccgaa
     7081 agcgcggcgt aactgtaccg gttctgattt ggggtttgtt tgaagtactt accaaagcct
     7141 tgtccggcga ggtacaccgg caaggcggcg gttgtctgag ccttttgcgt ttcagacggc
     7201 atcagtgcag atgacgccgt ctgaagaccg tagtgaagtc ggttagaaaa acggattgtg
     7261 ccgtttttcg tgtccgatgg aagtcatacg cccgtgtccg gcgacaactt gcacggtttc
     7321 ggggagggcg aataatttgt tgcggatatt attgattaag tcggcgtggt tgccgcgcgg
     7381 aaaatcggtt ctgcctatgg tttcgtaaaa cagcacgtcg cccgcaatca gcagctccgc
     7441 ttcggcacaa tagaaaacca cgtgtcccgg cgtgtgcccc ggaatatgca gcacttggaa
     7501 ggcgtagcgt ccgactttga gcgtttcgcc ttcttcgagc caatggttcg gcgcaaaggc
     7561 gggcgagacg gggaatccgt attgcgcggt ggtttgcggc agcgattgga gcaggaattc
     7621 atcgtccgga tgcggcccga ggacagggac tttatgcgtt ttcaacattt cgaccacgcc
     7681 gcccgcgtga tcgagatggc cgtgcgtcag ccagattgcc gtgagcgtaa gtttgcggtt
     7741 tgccaacgct tgcagcagga acggcacgtc gccgccgaca tcggtcagga cggcttcgcc
     7801 gctttcgtcg tcccaaatca gggtgcagtt ttggcggaag ggggtaacgg agaggatttc
     7861 gtaacgtagg gtcatggcgt gttcctaaac ggtttttcag acggcatcgg gtttgccgtt
     7921 tgttttatgg cggtttgccg cctgtttgga tattggggga atcagatgat taagaagaca
     7981 atcggcggca tcataccgat ttttacggcg gttttcatcc ctgcatcagc aggcgcggcg
     8041 gatttgatgc tggcgcagga atacaaagac caagagattg caggctgggc aatgagcgag
     8101 aaactcgacg gcgtgcgcgc ctattgggac ggaaagcacc tgataagccg tcagggctac
     8161 gcgtttacgc cccccaaagg ctttaccgcg cagtttccgc cttatccttt ggacggcgaa
     8221 ttgtatagcg gacgcggtca gttcgagcag atttccgcta ccgtgcgttc tgtttcttca
     8281 gactggcgcg gcatccgcct gcacgttttc gatgtaccca aggcgcaggg caatctctac
     8341 caacgtttgg cagtcgcaac gcagtggctg aaaacgcatc cgaacgcgcc gattaccatc
     8401 atcccgcaaa ccaaagtgcg cgaccggcag cacgcgatgg actttttaaa acaaatcgaa
     8461 gcgcagggcg gcgaaggcgt gatgctgcgt cagcccgaat cccgttatag cggcggcagg
     8521 agcagccaat tattgaagct gaaaagccaa tacgacgacg aatgcacggt aacacggcac
     8581 tatgagggca aagggcgaaa cgccggacgg ctgggcgcgg tcggctgcaa aaaccgacac
     8641 ggcgaattcc gcatcggcag cggtttcaaa gacaaagacc gcgacaaccc gcccaaaatc
     8701 ggcacactga ttacctaccg ctaccgtggt tttacgcgga aaggcacgcc gaaatttgcc
     8761 acatttgtgc gcgtgcgtac cgaccgctga gcaggacggt tcagacggca gccgatactt
     8821 tggtttataa ttttcctttt accgaccgat tccgacatat gaccgattta gaaaccaaac
     8881 gccttgaaac acaggcgatg cttgaaaacg ccgatctttt gttcgaccaa ggccaatgcc
     8941 gtgccgcact gcaaaaagtg gcggacgaga ttacgcgcga tttgggcggc aaatatccgc
     9001 tgctgctgcc cgtgatgggc ggcgcggtgg tgtttacggg gcagttgctg ccgctgttgc
     9061 gttttccctt agattttgat tatgttcacg tttcccgtta cggcgacaag ctggagggcg
     9121 gcgcgttcaa ctggaagcgt atgcccgatg cggaacaaat ccggggcagg cacgtcgtcg
     9181 tgctggacga tattttggac gaagggcata cgatgtccgc cattcaagcc aaacttttgg
     9241 aaatgggtgc ggcaagctgc cgtgcggcgg tgttcgccaa caagctgatt gacaaaccca
     9301 agcctatccg agccgattat gtcggactgg atgtgccgaa ccgttatgtt ttcggttacg
     9361 gcatggatgc ggcgggctgc tggcgcaatc tgggcgagat ttacgcattg gacggaaaat
     9421 aaggacgcga tgccgtctga aggcctttca gacggcatcg cgcccatacg ccggcaggat
     9481 aatgaagaac aggacgcatc aatatgatag ggcttttaat catcacacac gaaaccatag
     9541 gcgaagccta ccgcaagctg gcacatcatt ttttcccggg cgggctgcct gaaaacgtcc
     9601 gcatactcgg cgtgcaaccg acggaagacc aagacgacat catcaacaac gccattgccg
     9661 cgcttcagga atttcccgac aacgacggcg tgctgattat gaccgatatt ttcggcgcga
     9721 ccccctgcaa tgcagcccgc cgcctcgtgc gcgaaaacaa atcggcgatt ttgaccggac
     9781 tgaacgcgcc gatgatggtt aaggccgtcc aatattcgcc ggcggcggaa gaccttgccg
     9841 cctttaccga atgcgtcagg gaggcggcgg taaaaggcat tttcgccatc acgtccgcgc
     9901 ccgaagattt ggtgtgccgg cgcagcggcg atgccgtctg aagaagcggc agggcaggaa
     9961 aacattttaa acggcgtctg ctgccgatat acataacacg ggaatcgaaa tgctcaaaca
    10021 atccatcgaa atcatcaaca aactcggact tcacgcccgt gcctccagca aattcaccca
    10081 aaccgcgtct cagtttcaaa gcgaagtctg ggtaacgaaa aacggcagcc gcgtcaacgg
    10141 caaaagcatc atggggctga tgatgctcgc cgccgccaag ggtacggtca tcgagctgga
    10201 gacggacggc gcggacgagg cggaagcgat gcgcgccctg accgacttaa tcaacggcta
    10261 cttcggcgag ggcgaataat gagtatcgtg ctgcacggcg tggcggcggg caaaggcatt
    10321 gccgtcggtt gcgcccacct gattgcgcgc ggtacggagg aagtgccgca gtatgatgtt
    10381 gcggaggcgg acaccgatgc cgaagccgaa cgtttcgatg ccgccgtcaa agccacgcgc
    10441 aaagagttgg aacagctccg cagcgcgatt cccgaaaacg ccccgaccga gttgggcgcg
    10501 ttcatctcgc tgcacctgat gctcttgacc gatgttacct tgtcgcgcga acccgtcgat
    10561 attttaaggg aacaaaaaat caacgccgag tgggcattga agcagcagag cgacaaactc
    10621 gccgcccaat tcgacaatat ggacgatgcc tatttgcgcg aacgcaagca ggatatgctg
    10681 caagtcgtcc gccgcatcca caacaacctg atcgggcagg gcaacgagtt ggaagttgcc
    10741 gacaacctgt ttgacgaaac cgttctgatt gcaaacgatc tttcgcccgc cgacacggtt
    10801 ttgtttaaag agcagcgcat tgccgccttc gttaccgatg ccggcggccc caccgggcat
    10861 acggcgattt tgggcaggag cttggacatc ccgtccgtcg tcgggctgca caacgcgcgc
    10921 aaactgatta ccgagggcga aacggtcatt gtggacggta tcaacggcgt gttgattatc
    10981 gcgccggatg agtcggtgtt gaacgaatac cgccgccgtg cccgcgaata ccgcagccac
    11041 aaacgcgatt tgaacaagct caaaaaaacc gccgccgcca ccgctgacgg ggtctgcatc
    11101 gagcttgtgg gcaatataga atccgccgaa gacgtgaaac cgctgcacaa cctcggcgca
    11161 gacggcatcg ggctgttccg cagcgagttt ctttacctga accgcgatac gatgccgtct
    11221 gaagacgagc agtacgaagt gtacagcgcg attgtcaaaa aaatgaaagg caaaagcgta
    11281 acgatacgga cagtcgattt gggtgtggac aaaaacccgc gctggttcgg gaaaaacagc
    11341 acgcccaacg gcagcctcaa ccccgcgctg ggcatgaccg gcatccgcct gtgccttgcc
    11401 gaaccggtca tgttccgcac ccagatgcgc gccatcctcc gcgccgccgc ccacggcccc
    11461 gtgcggatga tgtggccgat gattacctcc gtatccgaag tgcgccagtg cctcatccac
    11521 ctcgacaccg cgcaacgcca gcttgccgaa cgcggcgatg ccttcggtaa agtcggcatc
    11581 ggctgtatga ttgaaattcc gtctgccgcg ctgaccgtcg gcagtatttt gaaactggtc
    11641 gatttcatct ccgtcggtac caacgacctg attcaataca tcttgtccgt cgatcgcggc
    11701 gacgacagcg tcagccacct ctaccagccc ggccatcccg ccgtgctgaa aatgctgcaa
    11761 cacgtcatcc gtaccgccaa ccgcatggac aaagacgtat ccgtatgcgg cgagatggcg
    11821 ggcgataccg cgtttacccg cgttttattg ggtatggggc tgcgccgttt ttccatgaac
    11881 cccaacaaca tcctgcccgt caaaaacatc attctgcaca gcaatgtcgg acagctcgaa
    11941 agcgatattg tgaaagtcat ccgctgcgaa gacgaagaga agtcggaaaa gctgatcaaa
    12001 cagatcaaca gcgtgtctgt cgaggaagaa gccgacttca aggggcggaa ataaatacgg
    12061 caggtaaaaa atagaaatac ttaacaatgc ccgcaatctg aaattttgcc attcttgcaa
    12121 aatagaaaac cgaaacagaa acccaaaatc
//
LOCUS       DAWITQ010000047        12050 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.047, whole genome shotgun sequence.
ACCESSION   DAWITQ010000047 DAWITQ010000000
VERSION     DAWITQ010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12050)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12050)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12050
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.047"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            171..1097
                     /locus_tag="WIX18_001011"
     CDS             171..1097
                     /locus_tag="WIX18_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ5238138.1"
                     /translation="MENQRPLLGFALALLAAMTWGTLPIAVRQVLKFVDAPTLVWVRF
                     TVAAAVLFVLLALGGRLPKRRDFSWCSFRLLLLLGVAGISANFVLIAQGLHYISPTTT
                     QVLWQISPFTMIVVGVLVFKDRMTAAQKIGLVLLLAGLLMFFNDKFGELSGLGAYAKG
                     VLLCAAGSMAWVCYAVAQKLLSAQFGPQQILLLIYAASAAVFLPFAEPAHIGSLDGTL
                     AWVCFAYCCLNTLIGYGSFGEALKHWEASKVSAVTTLLPVFTVIFSLLGHYVMPDTFA
                     APDMNGLGYVGALVVVGGAVTAAVGDRLFKRR"
     gene            complement(1162..2550)
                     /gene="fumC"
                     /locus_tag="WIX18_001012"
     CDS             complement(1162..2550)
                     /gene="fumC"
                     /locus_tag="WIX18_001012"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HEZ5238139.1"
                     /translation="MNTRTEHDTMGNVEVPSEAYWGAQTQRSRNNFKIGGETLPQPLI
                     YALALVKKAAAATNVSLGRIKPEQADLITQAADDVLNGRLDGQFPLVVWQTGSGTQSN
                     MNMNEVLANRANEIAGTGLAAYQPVHPNDHVNHAQSTNDAFPTAIHVAAAIEINRHLI
                     PAVKALRDTLDKKAQAFAPIVKIGRTHLQDATPLTLGQEFSGYVSQLDHGLGRLNDAL
                     KDLYELALGGTAVGTGLNSHPEYAEKAAAKLAELSGLPFVSAPNKFEALGGRDAAVAA
                     SGALKTLAASLNKIANDIRWLASGPRCGLGEIKIPENEPGSSIMPGKVNPTQCEAMTM
                     VCCQVFGNDVTIGMAGASGNFELNVYMPVIAYNLLQSIRLLGDACNSFNEHCAVGIEP
                     VPEKIDYFLHHSLMLVTALNRKIGYENAAKVAKTAYKNDKSLRETAVELGLLTGEEFD
                     ELVVPADMVHPR"
     gene            complement(2691..4670)
                     /gene="tkt"
                     /locus_tag="WIX18_001013"
     CDS             complement(2691..4670)
                     /gene="tkt"
                     /locus_tag="WIX18_001013"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEZ5238140.1"
                     /translation="MSQLANAIRFLSADAVQKANSGHPGAPMGMAEMAETLWTKFLNH
                     NPANPKFYNRDRFVLSNGHASMLLYSLLHLTGYNLSIEDLKNFRQLHSKTPGHPEYGY
                     TDGVETTTGPLGQGIANAVGMALAEKILAAEFNKDGLNIVDHYTYVFMGDGCLMEGVS
                     HEACSLAGTLGLGKLIVLYDDNNISIDGKVDGWFTENIPQRFESYGWHVVPNVNGHDT
                     AAIQAAIEAARAETGKPSIICCKTLIGKGSANKEGSHKTHGAPLGADEIEATRKHLGW
                     TYPAFEIPQEIYDAWNAKEQGAKLEADWNELFAQYQAKYPAEAAEFVRRMDKKLPDNF
                     DEYVQTALKEVCAKAETIATRKASQNSIEILAKELPELVGGSADLTPSNLTDWSNSVS
                     VTRDKGGNYIHYGVREFGMGAIMNGLALHGGVKPFGATFLMFSEYERNALRMAALMKI
                     NPVFVFTHDSIGLGEDGPTHQPIEQTATLRLIPNMDVWRPCDTAESLVAWAEAVKAAD
                     HPSCLIFSRQNLKFQARSEQQLNDIKRGGYIISEAQGNAQAVIIATGSEVELALEAQK
                     ALAAQNIAVRVVSMPSTNVFDRQDAAYQATVLPEGLPRVAVEAGHADGWYKYVGLNGA
                     VVGINRFGESAPADLLFKAFGFTVDNVVDTVKSVL"
     gene            5199..6695
                     /gene="ccoG"
                     /locus_tag="WIX18_001014"
     CDS             5199..6695
                     /gene="ccoG"
                     /locus_tag="WIX18_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HEZ5238141.1"
                     /translation="MTTENQAGSPASGIGTSEQTKAAPKAKKTFDPRASVIQIHPEGE
                     RIHPKKAEGRFAKLRIAAVLATQFVFYVIPWFNWSGRQAVVFNIPERHFFIFGLSLGV
                     GDLIYLALLLMICAFGLFWWTTIAGRLWCGYSCPQTVYTEIMLWIDNLVEGDRNKRLK
                     LEKSPWNFTKIRIKATKYLLIFLVCAWTGITFAGWFVPIRQFVPDLFTGAAGGGAMFA
                     TAFYGFMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDAERGEPRGARKKTV
                     NKEEAGLGDCINCAMCVQVCPVGIDIRNGLQYQCIGCAACIDACDEIMDKMGYPRGLI
                     RYTTESALEHEYSEKDIKKRLLRPRVAGYGAVLALVIIAFLAGLSTRKMVEVDILKDR
                     GVLVRENAKGWLENAYSLRIINKSEKEQLITASVKGFDEIALTGLPEGGIKVAPRETV
                     TLPVQVSTIPEYADKGSHPIEFTFQYRESGAPDGKPVVLEEDATFIGE"
     gene            6698..7246
                     /locus_tag="WIX18_001015"
     CDS             6698..7246
                     /locus_tag="WIX18_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HEZ5238142.1"
                     /translation="MSQNTPIKPWYKHVWPWILMAGPIFVVIASVAMFFVAQQHATDL
                     VTDDYYKDGKHIDIQLHRDEEAVRRHIGVQVLISPDMNAAKVFVGGEFDGKQPLNLLL
                     MHPTRKADDQTVALKPVGSAQNGRAEYEAVFKTLSPTNHWYVRVEDAAGVWRVENKWI
                     TSQGNAVDLTPMDKLFNNAGSK"
     gene            complement(7588..8763)
                     /locus_tag="WIX18_001016"
     CDS             complement(7588..8763)
                     /locus_tag="WIX18_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEZ5238143.1"
                     /translation="MQNIFDPLVIRGKSLTPIVQGGMGVGVSASGLSSAVARENGIGT
                     IASVDLRHLHEDLLAESQINPSEEKYTSLNCTALDREIQKAKSASEGKGLIAVNVMKA
                     VKDHAAYVRQACESGADAVVMGAGLPLDLPEMTEGYHKYVALLPILSESRGINIVLKR
                     WMKKGILPDAIVVEHPAHAAGHLGASTVEGVNDAKFDFKRVIEETFEVFKSLGLESEK
                     IPLILAGGMANFEKVKTALKNWGASAVQIGTAFAVTEEGDAHLNFKKTLAGAETEKVV
                     EFMSVAGLPARGVRTKFLDSYIKRESKLQTNAKADPRRCTQGLNCLTSCGLRDGLSKA
                     GQFCIDIQLAAAFRGEVDKGLFFRGKDPLPFGNAIRTVRETIQYLLTGSEPVATLGR"
     gene            complement(9322..9396)
                     /locus_tag="WIX18_001017"
     tRNA            complement(9322..9396)
                     /locus_tag="WIX18_001017"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9361..9363),aa:Glu,seq:ttc)
     gene            complement(9414..9490)
                     /locus_tag="WIX18_001018"
     tRNA            complement(9414..9490)
                     /locus_tag="WIX18_001018"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9454..9456),aa:Arg,seq:acg)
     gene            9581..10993
                     /locus_tag="WIX18_001019"
     CDS             9581..10993
                     /locus_tag="WIX18_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEZ5238144.1"
                     /translation="MLFEFKENKMIVASRWPLLEKVFLRFGMPVAVVDLESTGGNLYE
                     DRVTEVALVKFEQGRVVRHEWLVNPQKPIPQFVAGLTGISDGMVADAPVFAEIAGELF
                     SVLKGCVLVAHNSRFDYTFLKHEFHRAGIGFSSPALCSVQLSRCLYPQFYKHSLDSII
                     ERLGIVVEDRHRAMADVSALCDYLEYSLSEHGVEAWIRQCFRLMNPKPLPAALPERLR
                     EQLYGLPDSMGVLACFDGGGKVNYIGTFERVYSEVSALLDSGKASFDWCNTEAVRFFP
                     ALGRLHAYKIKAELVRRYHSGCYVSAKNLLKTFTTVRFEKGSDGMLNAKTTALKNGVT
                     DNPPTGLFANKKAARRALSSWAETYGLCPAAAGILSDGYTEDEPCPVYVSGRCDKACG
                     RSDEQVLAFAHKLPILDWGKMHEVEITETDPLTGEKVVLHGMGGALEMGDGLWYFDKD
                     LPDAFKAKFKTDRKNIKEIG"
     gene            complement(11204..11983)
                     /locus_tag="WIX18_001020"
     CDS             complement(11204..11983)
                     /locus_tag="WIX18_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HEZ5238145.1"
                     /translation="MAASPEAKFTEEKILWVKHHTPKLITFAISRPESYRFKAGQFSR
                     LGFYEGEGFIWRAYSIVSAEYADTLEYFAVLIQDGPMSARFAKMQQGDTILLDKNATG
                     FLLPERFPDGKDLVMLCTGSGIAPFLSILEQPEIRQRFDTVNLIHSVSFPEELIFNDR
                     LAALAEHPLVGEYGHSFRFVPVTTRAANPSGLGGKRIPELLKNNSIEQALHTKFTPES
                     TRFMICGNPEIVKDTFQTLLDMGYAMHRNRIPGQIMMENGF"
BASE COUNT         2691 a         2770 c         3492 g         3097 t
ORIGIN      
        1 ttaaaattca ggcggtgttt tcaaatagcg cgaagcaata gccgagcttc agccggtttg
       61 tttgaaatca aagggttgga atcaaacgcc aaacgcttga accatcattg cccgatgcgg
      121 caaaccggca tcgtccggca atacggttgt ttaaaaatag gaaaatcagg atggaaaacc
      181 aaaggccgct cctaggcttc gcgttggcac ttttggcggc gatgacgtgg ggaacgctgc
      241 cgattgccgt gcggcaggta ttgaagtttg tcgatgcgcc gacgctggtg tgggtgcgtt
      301 ttaccgtggc ggcggcggta ttgtttgttt tgctggcact gggcgggcgg ctgccgaagc
      361 ggcgggattt ttcttggtgc tcattcaggc tgctgctgct gctcggcgtg gcgggcattt
      421 cggcaaactt tgtgctgatt gcccaagggc tgcattatat ttcgccgacc acgacgcagg
      481 ttttgtggca gatttcgccg tttacgatga ttgttgtcgg tgtgttggtg tttaaagacc
      541 ggatgactgc cgctcagaaa atcggcttgg ttttgctgct tgccggtttg cttatgtttt
      601 ttaacgataa attcggcgag ttgtcgggtt tgggcgcgta tgcgaagggc gtgttgctgt
      661 gtgcggcagg cagtatggca tgggtgtgtt atgccgtggc gcaaaagctg ctgtcggcgc
      721 aattcgggcc gcaacagatt ctgctgttga tttatgcggc aagtgccgcc gtgttcctgc
      781 cgtttgccga accggcacac atcggaagtt tggacggtac gttggcgtgg gtttgttttg
      841 cgtattgctg cttgaatacg ttaatcggtt acggctcgtt cggcgaggcg ttgaaacatt
      901 gggaggcttc caaagtcagc gcggtaacaa ccttgctccc cgtgtttacc gtaatatttt
      961 ctttgctcgg gcattatgtg atgcctgata cttttgccgc gccggatatg aacggtttgg
     1021 gttatgttgg cgcactggtc gtggtcgggg gtgcggttac ggcggcggtg ggggacaggc
     1081 tgttcaaacg ccgctagttc gcaggcaacg gaaaatgccg tctgaacgag gtttcagacg
     1141 gcattttatt tgagggaaag attagcgcgg atgaaccata tcggcaggaa cgaccagttc
     1201 gtcaaattct tcgcccgtca gcaagcccaa ctcaacggcg gtttcgcgca gcgatttgtc
     1261 gtttttgtag gcggttttgg cgactttggc ggcgttttcg taaccgattt tgcggtttaa
     1321 cgcggtaacg agcatcaggg aatggtgcag gaaatagtcg attttttccg gtacgggttc
     1381 gatgccgacg gcgcagtgtt cgttgaagct gttgcacgcg tcgcccaaga ggcggatgga
     1441 ttgcaagagg ttgtaggcga taacgggcat atagacgttc agctcgaaat tgcccgacgc
     1501 gcccgccata ccgatggtaa cgtcgttgcc gaacacttgg cagcacacca tcgtcattgc
     1561 ttcgcattgg gtcgggttga ctttgcccgg catgatggac gaacccggct cgttttcggg
     1621 gattttgatt tcgcccaaac cgcaacgcgg gccgcttgcc agccagcgga tgtcgttggc
     1681 gattttattc aggcttgccg ccagcgtttt caatgcgccc gaagcggcaa cggcggcatc
     1741 gcgtccgcct aaggcttcaa atttgttcgg cgcgctgaca aacggcaagc cagacagttc
     1801 ggcgagttta gcagcagctt tttcggcgta ttcgggatgg ctgttcaaac ccgtgccgac
     1861 cgccgtaccg cccaaagcaa gttcatacaa gtctttaagc gcatcgttca gacggcctaa
     1921 accgtgatca agctgggaaa cgtagccgga aaattcctgt cccaaagtca gcggcgtcgc
     1981 gtcttgcaag tgggtgcggc cgattttgac gataggggcg aaagcttggg cttttttgtc
     2041 caacgtgtcg cgcagggctt ttacggcggg gatgaggtgg cggttgattt caatcgcggc
     2101 ggcaacgtgg atggcggtcg ggaatgcgtc gttggtcgat tgcgcgtggt tcacatggtc
     2161 gttgggatgg acgggctgat acgccgccaa acctgtacct gcaatttcgt tggcgcggtt
     2221 cgccagcact tcgttcatgt tcatattgga ctgcgtgccg gagccggtct gccaaaccac
     2281 taaaggaaac tgtccgtcaa gcctgccgtt caacacatca tccgccgcct gcgtaatcaa
     2341 atccgcctgt tcgggcttaa tcctgccgag ggaaacattg gtggcggcag cggctttttt
     2401 caccagcgcc aaagcataaa tcagcggctg cggcagggtt tcgccgccga ttttgaaatt
     2461 gttgcggctg cgctgggtct gcgcacccca ataggcttcg gacgggactt cgacattgcc
     2521 catggtgtcg tgttcggtgc gagtgttcat acgtttctcc ttttgaaatg tgaataagag
     2581 tgattcgcaa atattataat ggagattggt ggaatgagga agcatcaagg cgggagggca
     2641 aaaaaatgcc gtctgaaaag cgttcagacg gcatttgttt aggagtgggg ttacagcact
     2701 gatttcactg tatcgaccac attgtccacg gtaaagccga atgctttgaa gagtaagtcg
     2761 gcaggggcgg attcgccgaa gcggttgatg ccgacgactg cgccgttcag accgacgtat
     2821 ttgtaccagc cgtcggcgtg tccggcttct acggcaacgc gcggcagacc ttcgggcagg
     2881 acggtggctt gataggcggc gtcttggcgg tcgaatacgt tggtggacgg catggaaacg
     2941 acgcgtacgg cgatgttttg cgcggcgagg gctttttgcg cttccaaagc cagctcgact
     3001 tcggaaccgg tggcaatgat gacggcttgc gcgttgcctt gggcttcgct gatgatgtag
     3061 ccgccgcgtt tgatgtcgtt cagttgttgt tcgctgcgcg cttggaattt caggttttga
     3121 cggctgaaaa tcaggcagga cggatgatcg gcggctttga cggcttctgc ccaagccacc
     3181 agagattcgg cggtgtcgca cggacgccat acgtccatgt tcggaatcag gcgcagggtg
     3241 gcggtttgct caatcggctg gtgggtcggg ccgtcttcgc ccaaaccgat ggaatcgtgg
     3301 gtgaacacaa atacagggtt gattttcatc agtgccgcca tgcgcaaggc gttgcgttcg
     3361 tattcgctaa acatcaggaa ggtcgcgcca aagggtttta cgccgccgtg cagggcaaga
     3421 ccgttcataa tcgcacccat accgaactcg cgcacgccgt agtggatgta gttgccgcct
     3481 ttgtcgcggg taacggagac gctgtttgac cagtcggtca ggttggacgg ggtcaggtcg
     3541 gccgaaccgc ccaccaattc aggcaactct tttgccaaga tttcgatgct gttttggctg
     3601 gctttgcggg tagcgatggt ttcggctttg gcgcacactt ctttcaatgc cgtctgaacg
     3661 tattcatcga aattgtccgg cagcttttta tccatacggc gcacaaattc tgcggcttcg
     3721 gcaggatatt tggcttgata ttgcgcgaac agttcgttcc agtcggcttc cagtttcgcg
     3781 ccttgttctt tggcattcca cgcatcgtaa atttcttgcg ggatttcaaa ggcggggtaa
     3841 gtccagccca aatgtttgcg cgtggcttcg atttcgtccg cgcccaaagg tgcgccgtgg
     3901 gttttgtggc tgccttcttt gttggcactg cctttgccga ttaaggtttt gcagcagatg
     3961 atggacggtt tgccggtttc ggcacgtgcg gcttcgatgg cggcttgaat ggcggcggtg
     4021 tcatgaccgt ttacgttagg aacgacgtgc cagccgtagc tttcaaagcg ttgcgggatg
     4081 ttttcggtaa accagccgtc cactttacca tcaatggaaa tattgttatc gtcatacaaa
     4141 acaatcagtt tgcccaagcc taaagtgccg gcgagtgagc aggcttcgtg cgatacgcct
     4201 tccatcaggc agccgtcgcc catgaagacg taggtgtaat gatcgacgat gttcaaaccg
     4261 tctttattaa attcggcggc aaggattttt tctgccaatg ccatacccac cgcgttggca
     4321 atcccttgcc ccaacgggcc ggtcgtggtt tccacgccgt cggtgtagcc gtattcgggg
     4381 tggccggggg ttttgctgtg cagttggcgg aagtttttca agtcttcaat gcttaggttg
     4441 tagccggtca ggtgcagcag gctgtacaac agcatagacg cgtggccgtt ggagaggacg
     4501 aagcggtcgc ggttgtagaa tttggggttg gcgggattgt gattgaggaa tttcgtccac
     4561 aatgtttccg ccatttccgc catacccata ggcgcgccgg ggtggccgga attggctttt
     4621 tgaacggcat cggccgagag gaagcggatt gcgtttgcca gttgagacat tttgtatttt
     4681 ccttgctggt gtttcagata agtggataat cggaaagcgt tgattatcgc ccgattcgct
     4741 tatgctttca agaaaagggc ggacgcgggg gaaggcggcg gcaggagacc ggtggggaag
     4801 gattttcgat ttgcgggcga agcctgccat tattcctttt gaaataaaaa gttatagatt
     4861 gtgtgccgga ttgtcgatag cgtttgttta tgagcttgcg ccgtcggttc tgccgatatg
     4921 ggggtgtcga tttttttagt ctttgttttt taaccgtatt cggattttgt tcgggcggta
     4981 cggcaaaatc cgggcgtttt gatgcggatg ggaaatgtat ccgccccata catccggacg
     5041 gcgcataaag ttgtacaata gcggaaatat attttgggaa aaacggattt tctcaaaact
     5101 tgaaacacaa cgccttaaaa aacaagaaaa atgacgtctg aaaagcaaac ggcggcggta
     5161 acgggcaaac catcaatcaa aaatctaagg aatgcagaat gaccacggaa aaccaagccg
     5221 gcagtccggc atccggaatc ggcacgtccg aacaaacaaa agccgcgccg aaagcaaaaa
     5281 aaacattcga tccgcgagcc agcgtgattc aaatccatcc cgaaggcgaa cgcatccatc
     5341 ccaaaaaggc ggaaggacgg ttcgccaaac tgcgtatcgc cgccgtattg gcgacgcagt
     5401 ttgtgtttta cgtcattccg tggttcaact ggagcggcag gcaggccgtc gttttcaata
     5461 tccccgaacg gcatttcttc attttcggat tgtcgttggg ggtgggcgat ttgatttacc
     5521 ttgccttgct gctgatgatt tgcgccttcg ggctgttttg gtggacgacg attgccgggc
     5581 gactgtggtg cggctattcc tgcccgcaaa cggtttacac cgaaattatg ctgtggatcg
     5641 acaacctggt cgaaggcgat agaaacaaac gcctgaagct ggaaaaatcg ccgtggaatt
     5701 tcactaaaat ccgcatcaaa gccaccaaat acctgttgat tttccttgtc tgcgcgtgga
     5761 cgggcatcac gtttgcaggc tggtttgtcc ctatccgcca gttcgttccc gatttattca
     5821 ctggagcagc aggcggcggc gcgatgtttg ccacagcgtt ttacggcttt atgaccttct
     5881 tcttcgcaca tattatgcgc gaaaaagtat gcctgcatat gtgtccgtat gcacgtttcc
     5941 aaagcgcgat gttcgacaag gacacgctga ttgtttctta tgacgcggaa cgcggcgaac
     6001 cgcgcggagc ccgcaagaaa acggtcaaca aggaagaggc gggtttgggc gactgcatca
     6061 actgtgcgat gtgcgtccaa gtctgccctg tcggcatcga catccgcaac ggtctgcaat
     6121 accaatgcat cggctgcgcc gcctgtatcg acgcgtgcga tgagattatg gacaaaatgg
     6181 gctatccgcg cggattaatc cgttatacga ccgaaagcgc gctggaacac gaatattctg
     6241 aaaaagacat taaaaaacgg ctgctcagac cgcgcgtggc aggttacggc gcggtgttgg
     6301 cgttagttat cattgccttc ctggccggtt tgtccacgcg caaaatggtc gaggtcgata
     6361 ttttgaaaga ccgtggcgta ctggtgcgcg aaaacgccaa aggctggctg gaaaacgcat
     6421 acagcctgcg tatcatcaac aaaagtgaaa aagaacagct cattaccgca agtgtcaaag
     6481 gctttgacga aatcgccctg accgggctgc ccgaaggcgg tatcaaggtt gccccgcgcg
     6541 aaacggtaac ccttcccgtc caagtgtcca ccattccgga atacgcggac aaaggcagcc
     6601 accctatcga atttaccttc caataccgcg aaagcggcgc gcccgacggc aagccggtcg
     6661 tcttggaaga agatgcaacc tttatcggag aataaccgtg tctcaaaaca ctccaatcaa
     6721 accttggtac aaacacgtct ggccgtggat cttgatggcg gggccgattt ttgtcgtcat
     6781 cgccagcgtc gctatgtttt ttgtcgcaca gcagcacgcg acagatttgg ttacggacga
     6841 ttattataaa gacggcaaac atatcgacat ccagcttcat cgggatgaag aagccgtcag
     6901 acggcatatc ggggtgcagg ttctcatttc ccccgatatg aatgcggcaa aagtgtttgt
     6961 cggcggcgag tttgacggca aacagccttt gaacctgctg ctgatgcacc cgacccgcaa
     7021 ggcggacgat caaaccgtcg ccctcaagcc cgtcggcagc gcgcagaacg gcagggcgga
     7081 atatgaggcg gtgttcaaaa ccctttcgcc gaccaaccac tggtatgtgc gcgtggagga
     7141 cgcggcaggc gtgtggcgcg tcgagaacaa atggattacc agccaaggca atgcggtgga
     7201 tctgaccccg atggataaac ttttcaataa tgccggaagc aaataaaaaa gccgtgtttt
     7261 cattgcattg gtttgccaga tgcaatgtcg ggcaggcatt gtttgattat tcggcgtgat
     7321 ggtctgattt atcggacgaa aataaatgta tctcatcccg tttatttttt aacactattc
     7381 cagaacgcag cctgaaaaat gccgtctgaa gggcttcaga cggcatttgt gttgtatgcc
     7441 cgacacaatg cggaaggcgt tttgtttaca taaaaacgtt tttatttctc tccgtttttt
     7501 cgacactatt ccgaaacgca gcctgaaaaa tgccgtctga aagcccttca gacggcattt
     7561 tgtttgcaaa tcaaatccta cctgatgtca gcgtccgagc gttgcaacag gttcgctccc
     7621 cgtcagcaga tattgtatcg tctcgcggac ggtgcggatg gcattaccga agggcagcgg
     7681 gtctttacct ctgaagaaca ggcctttatc tacttctcca cgaaatgcgg cagcaagctg
     7741 gatatcaata cagaattgcc ctgctttgga aagcccgtcg cgcaggccgc agctagtcag
     7801 gcagtttaaa ccttgggtac agcggcgcgg gtcggctttg gcgtttgtct gaagtttgct
     7861 ttcacgcttg atgtagctgt ctaggaattt ggtgcggaca ccgcgcgccg gcaaaccggc
     7921 aacagacata aattcgacta ctttttcagt ttccgcaccg gcgagcgttt ttttgaagtt
     7981 aaggtgtgca tctccttctt cggtaacggc aaaagccgta ccgatttgaa cggcggatgc
     8041 tccccagttc tttagggcgg ttttgacttt ttcaaaattt gccatgcctc ccgcaagaat
     8101 aagcgggatt ttttcgcttt ccagccctaa acttttgaaa acttcaaacg tttcctcaat
     8161 cacgcgtttg aagtcgaact tggcatcgtt tacgccttca acggttgatg cacccaaatg
     8221 tccggccgcg tgggcaggat gttcgactac aatcgcatcg ggcaatatgc cttttttcat
     8281 ccaacgtttc aagacgatat taataccgcg cgattcggac agaatcggca gcagcgcgac
     8341 atatttatga tagccctcgg tcatttccgg caggtctaaa ggcagaccgg cacccattac
     8401 aaccgcatcc gcccctgatt cgcaagcctg gcggacatat gcggcgtggt ctttgaccgc
     8461 cttcatcacg ttgaccgcaa tcagcccttt tccctctgaa gcacttttgg ctttttggat
     8521 ttccctgtcc aatgcggtac agttcaaaga cgtatatttc tcttcactcg gattgatttg
     8581 ggattcggcg agtaggtctt cgtgaaggtg gcgcaaatcc acactggcaa tcgttccgat
     8641 accgttttca cgtgccaccg cgctggataa acccgatgcg gaaacaccga cccccatacc
     8701 gccttgcacg atgggggtaa gggattttcc acgaataacc aaagggtcaa aaatattttg
     8761 catcagtttc tccgagtata cgaatcagtc aggctcatga aaaatggttc taactgtttt
     8821 agaactattg ctcaaatttg gtattatact ctaaatatcg cggcggtaaa caagaaagca
     8881 gccggagctt cgggcatatt ctgttacgcc tgtttcaatc gggagagaaa atattatagt
     8941 gaattaacaa aaatcaggac aaggcgacga agccgcagac agtacaaata gtacggaaag
     9001 gcgaggcaac gccgtactgg tttaaagtta atccactata aatttgatga tggcataaaa
     9061 aagccctagt cagttgctgt caaaggggat tgttaagaaa agtaatgcca cgttgatggg
     9121 gtgcaatata tcaggcgttt caatcgggta aaatgttgga cggacaccgc atccggttac
     9181 gtgatatcgg tttgcacggc aaaggtttga atatgattcg attacgtctg agagtctgat
     9241 gaagggggta ggtaaagata tggtaatgaa ttgccgaggc aataaaaatc cccgagggat
     9301 tatttcgggg gatttggaat ttggcacgcc cacggggaat cgaaccccgg ttaccgccgt
     9361 gaaagggcga tgtcctaacc gctagacgat gggcgcatat tgtattttct tactggcgca
     9421 cccggagcga ttcgaacgcc cgaccctctg gttcgtagcc agatactcta tccaactgag
     9481 ctacgggtgc actgcaagaa agatttgaat tttagggtaa tcatcggatt ctgtcaattg
     9541 ttttgttgga tgaaatgcct taaaagtgta aaatatcggt ttgttgtttg aatttaaaga
     9601 gaataaaatg attgttgctt cccgctggcc cttgctggaa aaggtatttt tacggtttgg
     9661 aatgcctgtt gccgtggttg atttggaatc gacgggcggc aatctgtatg aagacagggt
     9721 aaccgaagtg gctttggtca agtttgagca gggaagggtg gtgaggcatg agtggttggt
     9781 taatcctcaa aaaccgattc cgcagtttgt tgcggggctg acggggattt cagacggcat
     9841 ggttgccgac gcacctgttt ttgcagagat tgccggcgag ttgttttcgg tattgaaggg
     9901 ttgtgtgctg gttgcacata acagccgttt cgactatacg tttttaaagc atgagtttca
     9961 tcgtgcgggt atcggatttt catcgcctgc tttgtgcagt gtgcaactgt cccggtgtct
    10021 gtatccgcaa ttttacaagc acagcctgga cagtatcatc gaaaggttgg ggattgttgt
    10081 ggaagacagg catcgtgcga tggcggatgt atcggcattg tgcgattatt tggaatacag
    10141 tctgtcggaa cacggggtcg aggcatggat caggcagtgt ttccgtttga tgaatccgaa
    10201 accgctgcct gccgcgctgc ccgaacggtt gagggaacag ttgtacggtt tgcctgacag
    10261 tatgggggtg ctggcttgtt tcgacggagg agggaaagta aattacatcg gtacgtttga
    10321 acgggtatat agcgaggttt cggctttatt ggattccgga aaagcctcgt ttgattggtg
    10381 caatacggag gcagtccgtt tttttcccgc attgggcagg ctgcatgcat ataagattaa
    10441 agcggaattg gtcaggcgtt atcattcggg ttgttatgtg tctgccaaaa atctgctgaa
    10501 aacatttacg accgtcaggt ttgaaaaagg ttcagacggc atgttgaatg cgaaaacaac
    10561 ggctttgaaa aacggtgtga cggataatcc gcctaccgga ttatttgcca ataaaaaggc
    10621 agcgagacgg gctttgtcgt cgtgggcgga aacatacgga ttgtgtcctg ccgcagccgg
    10681 tatcctgtcg gacggttata cagaggatga gccttgtccc gtatatgttt caggccgatg
    10741 cgataaggcg tgcggccgtt ctgacgaaca ggttttggcg tttgcacaca agttgcctat
    10801 tttggattgg ggaaaaatgc atgaggtaga aattaccgaa actgatcctt taacggggga
    10861 aaaagttgtt ctgcatggaa tgggcggcgc attggaaatg ggtgacgggc tttggtattt
    10921 cgataaagat ttaccggatg cgtttaaggc gaagtttaaa acggacagga aaaatattaa
    10981 ggaaatcggt taaatcgata ccggttgatg aaagccggta agtatgtaaa cagccgttcg
    11041 tattgattgc ctaatcggtt tgggttggaa tgtgttgccg tttgcaggta atgtgtccga
    11101 agatgccgtc tgaatttttt cagacggcat ttttgccgac gcggttttcg tgccgtgtcg
    11161 gtttgctctt ccaaccgaag gcatcggaca agcagggtgg tttttagaag ccgttttcca
    11221 tcatgatttg accaggaatg cggttgcggt gcatggcgta acccatgtca agcagcgttt
    11281 ggaaggtgtc tttgactatt tccggattgc cgcaaatcat aaaccgtgtg gattcggggg
    11341 taaacttggt atgcagcgcc tgttcgatgc tgttgttttt taagagttcc ggaatgcgtt
    11401 ttccgcctaa gcccgagggg ttggcggcac gggtggtaac agggacgaaa cggaacgagt
    11461 gtccgtattc gcctaccagg ggatgttcgg ccaatgcggc gagccggtcg ttgaaaatca
    11521 attcttcggg aaaagatacg gaatgtatca ggttgacggt atcgaaacgc tgccggattt
    11581 cgggttgttc gagaatggaa aggaaggggg cgatgccgga gccggtgcag agcatcacca
    11641 aatccttgcc gtcggggaag cgttcgggca ggaggaagcc ggtggcattt ttatcgagca
    11701 ggatggtatc gccctgttgc attttggcga aacgggccga catggggccg tcttggatga
    11761 gtacggcaaa atattcgagc gtgtcggcat attctgcgga aacgatggag taggcacgcc
    11821 aaataaagcc ttccccttcg tagaaaccga gtcgggagaa ctgtccggct ttaaaacggt
    11881 aggattcggg acggctgatg gcgaaagtga tgagtttcgg cgtgtggtgt ttgacccaca
    11941 aaatcttttc ttcagtgaat tttgcttcgg gcgaggctgc catgttgttg tccttgagtg
    12001 tgtttgtcgg gattatagcc aatttgggtg tttttttccg cattgacggt
//
LOCUS       DAWITQ010000048        11897 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.048, whole genome shotgun sequence.
ACCESSION   DAWITQ010000048 DAWITQ010000000
VERSION     DAWITQ010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11897)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11897)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11897
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.048"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(50..2350)
                     /gene="recQ"
                     /locus_tag="WIX18_001021"
     CDS             complement(50..2350)
                     /gene="recQ"
                     /locus_tag="WIX18_001021"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HEZ5238146.1"
                     /translation="MHRPTAKQILHEVFGYPEFRGRQEAVINTLAGGGSLTVLMPTGG
                     GKSLCYQIPALMREGVAVVVSPLIALMNDQVANLHAAGIEAAAVNSSTSADGAREIAD
                     KLAQGRLKLLYVAPERLVTDRFLRFLDQQTVSLFAIDEAHCVSQWGHDFRPEYQQLGM
                     LAERYPNVPRIALTATADAATRADIKHYLHLDDAPEFISSFDRPNIYYQVIEKNNGKK
                     QLLEFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLNAIPYHAGLSMDVREENQRRF
                     TREDNIIVVATVAFGMGIDKPDVRFVAHLDMPQSVEHFYQESGRAGRDGLPAVSWLCY
                     GLNDWVLLHERIAEGNSDEVQKQIEMQKLDAMLAVCETAACRRVLLLKHFGEASEPCG
                     HCDNCLHPPVRFDGTVLVQKLLSCVYRAGQRFAAGYITNLLRGKSDDWIRGNRHEQLS
                     TFGIGTELSNKEWRSVIRQCISLGYLTVNITRYQALQLTEAAKKVLKGETEVMLRPLK
                     RDKPAARTLKDNWLRTEREERLWQALRVWRMKQAEAEGIPAYMIFGDKTLRDLVEKMP
                     QDLNGLHDIYGLGEAKIDRFGHGILEVCRNAADFSHDAVIRPQTEREQQLRQKLEAWR
                     YEQARAENCALHAVLSDESLADMLAATPETETDLEGVHGLGSVRAAKYGRDILAVCRP
                     FSDGIDEAAKHKRRLMRALIQWCGETAKHEQSEPYRILSKAALRAIAAKQPEGLAELA
                     AVYGVGEEKAARYGAAVLAVLERNAV"
     gene            complement(2415..3197)
                     /gene="trpC"
                     /locus_tag="WIX18_001022"
     CDS             complement(2415..3197)
                     /gene="trpC"
                     /locus_tag="WIX18_001022"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HEZ5238147.1"
                     /translation="MTDILNKILATKAQEVAAQKAAVNAEHIRALAAEAAPVRSFIDS
                     IRGKHRLNLPAVIAEIKKASPSKGLIRPDFRPAEIARAYENAGAACLSVLTDEPYFQG
                     SPEYLKQAREAVSLPVLRKDFIIDEYQVYQARAWGADAVLLIAAALEQEQLERFEAVA
                     HELGMTVLLELHDETELEKCRNLTTPLWGVNNRNLRTFEVSLDQTLSLLPALEGKTVV
                     TESGITGKADVEFMQSRGVHTFLIGETFMRAGDIEAEVGKLF"
     gene            complement(3247..4203)
                     /locus_tag="WIX18_001023"
     CDS             complement(3247..4203)
                     /locus_tag="WIX18_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheT family hydrolase"
                     /protein_id="HEZ5238148.1"
                     /translation="MILTPPDTPLFLRNGNADTIAAKFLQRPAPAYRRELLPDSTGKT
                     KVAYDFSDGISPDAPLVVLFHGLEGSSRSHYAVELMLAVRDRGWHGVVVHFRSCGGIA
                     NTAPVFYHLGDTAEIAFTLDTFAARYREIYAVGVSLGGNALAKYLGEQGKKALPQAAA
                     VISAPVDAEAAGRRFDSGITRLLYTRYFLRTLIPKAKSLQGFQTAFAAGCKTLGEFDD
                     RFTAPLHGFADRHDYYRQTSCKPLLKHVAKPLLLLNAVNDPFLPPEALPIPDEVSEAV
                     TLFQPAHGGHVGFVGSTGGRLHLQWLPQTVLSYFDSFRTNSR"
     gene            complement(4336..5874)
                     /gene="murJ"
                     /locus_tag="WIX18_001024"
     CDS             complement(4336..5874)
                     /gene="murJ"
                     /locus_tag="WIX18_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HEZ5238149.1"
                     /translation="MNMLGALAKVGSLTMVSRVLGFVRDTVIARAFGAGMATDAFFVA
                     FKLPNLLRRVFAEGAFAQAFVPILAEYKETRSKEAAEAFIRHVAGMLSFVLVIVTALG
                     ILAAPWVIYVSAPGFAQDADKFQLSIDLLRITFPYILLISLSSFVGSVLNSYHKFGIP
                     AFTPTFLNVSFIVFALFFVPYFDPPVTALAWAVFVGGILQLGFQLPWLAKLGFLKLPK
                     LNFKDAAVNRVMKQMAPAILGVSVAQVSLVINTIFASYLQSGSVSWMYYADRMMELPG
                     GVLGAALGTILLPTLSKHSANQDTEQFSALLDWGLRLCMLLTLPAAVGLAVLSFPLVA
                     TLFMYREFTLFDAQMTQHALIAYSFGLIGLIMIKVLAPGFYARQNIKTPVKIAIFTLI
                     CTQLMNLAFIGPLKHVGLSLAIGLGACINAGLLFYLLRKHGIYRPGKGWAAFLAKMLL
                     ALAVMGGGLYAAQIWLPFDWTHTGGMQKAARLFILIVIGGCLYFASLAALGFRPRHFK
                     RVES"
     gene            complement(5874..6065)
                     /locus_tag="WIX18_001025"
     CDS             complement(5874..6065)
                     /locus_tag="WIX18_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238150.1"
                     /translation="MLEINRNPAILLHFRVLIQFAAGKGRFRFGKPLQTASNPMPSEA
                     VSVVQYAPLPQTGTTVEEQ"
     gene            6092..6790
                     /locus_tag="WIX18_001026"
     CDS             6092..6790
                     /locus_tag="WIX18_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEZ5238151.1"
                     /translation="MKSRQLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGL
                     VEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEH
                     VVWQKEMLPLARLAAAVDMAAADSKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQTA
                     FDGKKVLAAYESPESQARADKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTID
                     LLADKVREEQKAAQ"
     gene            complement(6847..7851)
                     /locus_tag="WIX18_001027"
     CDS             complement(6847..7851)
                     /locus_tag="WIX18_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HEZ5238152.1"
                     /translation="MQRQTELKNWLQTVYPERDFDLTFAAADADFRRYFRATFSDGSS
                     VVCMDAPPDKMSVAPYLKVQKLFDMVNVPQVLHADTDLGFVVLNDFGNTTFLTAMLQE
                     QGETAHKALLLEAIGELVELQKASREGVLPEYDRETMLREINLFPEWFVAKELGRELT
                     FKQRQLWQQTVDTLLPPLLAQPKVYVHRDFIVRNLMLTRGRPGVLDFQDALYGPISYD
                     LVSLLRDAFIEWEEEFVLDLVIRYWEKARAAGLPVPEAFDEFYRWFEWMGVQRHLKVA
                     GIFARLYYRDGKDKYRPEIPRFLNYLRRVSRRYAELAPLYALLVELVGDEELETGFTF
                     "
     gene            7921..10329
                     /locus_tag="WIX18_001028"
     CDS             7921..10329
                     /locus_tag="WIX18_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HEZ5238153.1"
                     /translation="MARLFSLKPLVLALGLCFGTHCAAADAVAAEETDNPTAGGSVRS
                     VSEPIQPTSLSLGSTCLFCSNESGSPERTEAAVRGSGEASIPEDYTRIVADKVEGQSQ
                     VQVRAEGNVVVERNRTTLNTDWADYDQSGDTVTAGDRFALQQDGTLIRGETLTYNLEQ
                     QTGEAHNVRMEIEQGGRRLQSVSRTAEMLGEGHYKLTETQFNTCSAGDAGWYVKAASV
                     EADREKGIGVAKHAAFVFGGVPLFYTPWADFPLDGNRKSGLLVPSLSAGSDGVSLSVP
                     YYFNLAPNLDATFAPGVIGERGAVFDGQVRYLRPDYAGQSDLTWLPHDKKSGRNNRYQ
                     AKWQHRHDISDTLQAGVDFNQVSDSGYYRDFYGNKEIAGNVNLNRRVWLDYGGRAAGG
                     SLNAGLSVLKYQTLANQSGYKDKPYALMPRLSADWRKNTGRAQIGVSAQFTRFSHDSR
                     QDGSRLVVYPDIKWDFSNSWGYVRPKLGLHATYYSLNRFGSQEARRVSRTLPIVNIDS
                     GATFERNTRMFGGGVLQTLEPRLFYNYIPAKSQNDLPNFDSSESSFGYGQLFRENLYY
                     GNDRINTANSLSAAVQSRILDGATGEERFRAGIGQKFYFKDDAVMLDGSVGKKPRNRS
                     DWVAFASGSIGSRFILDSSIHYNQNDKRAENYAVGASYRPAQGKVLNARYKYGRNEKI
                     YLKSDGSYFYDKLSQLDLSAQWPLTRNLSAVVRYNYGFEAKKPIEVLAGAEYKSSCGC
                     WGAGVYAQRYVTGENTYKNAVFFSLQLKDLSSVGRNPADRMDVAVPGYIPAHSLSAGR
                     NKRP"
     gene            10434..11495
                     /locus_tag="WIX18_001029"
     CDS             10434..11495
                     /locus_tag="WIX18_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEZ5238154.1"
                     /translation="MKIKALMIAAALLAAADVHAAPQKAKTASAKVAKVAKVAKVAKV
                     AKVAKVAKVAKVAATAQKEAAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKA
                     NLPKEAQISESELSRQVLMQLVNQSLIVQAGKRRNIQASEAEIDAVVAKNSALKNLSP
                     AQRRDFADNIIAEKVRQQAVMQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQH
                     ILIKADSENAAVGAESTIRKIYGEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVM
                     VPAFEEAVHALKPGQVGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAE
                     QATVNLLRDLHSGAYVDIR"
BASE COUNT         2742 a         3409 c         3335 g         2411 t
ORIGIN      
        1 caggaatttt taaatagagg caatgccgtc tgaaacttgg taacgggctt cagacggcat
       61 ttcgttccaa taccgccaac accgccgcac cgtaacgtgc ggctttttct tcgcctacgc
      121 catatacggc ggcaagctcc gccaaacctt ccggctgttt ggcggcaatg gcgcgcaggg
      181 cggctttgct gagaatgcgg tagggttcgg actgttcgtg ttttgccgtt tcgccgcacc
      241 attgaatcag ggcgcgcatc aggcggcgtt tgtgtttggc ggcttcatcg atgccgtctg
      301 aaaacggacg gcagacggcg aggatgtccc gtccgtattt ggcggcgcgt acgctgccca
      361 agccgtgcac gccttcgagg tcggtttcgg tttcgggcgt ggcggcaagc atatcggcaa
      421 ggctttcgtc ggagaggacg gcatgcaggg cgcagttttc cgcccttgcc tgttcatacc
      481 gccaggcttc gagtttttga cgcagttgtt gttcgcgttc ggtttgcgga cggatgacgg
      541 catcgtggct aaagtcggcg gcgttgcggc agacttcgag gataccgtgt ccgaaacggt
      601 cgattttggc ttcgcccaag ccgtagatgt cgtgcagacc gttgaggtct tgcggcattt
      661 tttcgacaag gtcgcgcagg gttttgtcgc cgaaaatcat ataggcgggg atgccttcgg
      721 cttctgcctg tttcatacgc caaacgcgca atgcctgcca caggcgttct tcgcgttcgg
      781 tacgcagcca gttgtctttg agggtgcggg cggcgggctt gtcgcgcttg agcggacgca
      841 gcatcacttc ggtttcgcct ttgaggactt ttttggcggc ttcggtcagt tgcaatgcct
      901 gatatcgggt aatgttgacg gtgaggtagc cgaggctgat acactggcgg atgacgctgc
      961 gccattcttt gttggacaac tccgtaccga tgccgaatgt ggacagttgt tcgtgccggt
     1021 tgccgcgtat ccaatcgtcg cttttacctc gcaaaaggtt ggtgatgtaa ccggcggcaa
     1081 aacgttgtcc ggcgcggtac acgcagctga gtaatttttg caccaacacc gtgccgtcaa
     1141 accgtacggg cggatgcagg cagttgtcgc aatggccgca gggttcggat gcttcgccga
     1201 aatgtttgag cagcagtacg cggcggcagg cggcggtttc gcagacggca agcatggcat
     1261 cgagtttttg catttcgatt tgcttttgca cctcgtcgct gttgccttcg gcaatccgtt
     1321 cgtgcagcaa cacccaatcg ttcaaaccgt aacacagcca actcacggca ggcagcccgt
     1381 cccgtccggc gcgccccgat tcctgataga aatgttcgac actctggggc atatcgagat
     1441 gggcgacaaa gcgcacgtcg ggtttgtcta tgcccatacc gaacgccacg gtcgccacca
     1501 cgataatatt gtcttcacgc gtaaagcggc gttggttttc ctcgcgcacg tccatgctca
     1561 aaccggcatg atacggaatc gcgtttaatc cgttttcacg caaaaactgc gccacatctt
     1621 cgactttttt gcggcttagg caatacacaa tgccgctttg ccccgtcatt tcttttcgga
     1681 tgaattcaag cagttgtttt ttgccattat ttttttcgat aacctgataa taaatattcg
     1741 ggcggtcaaa gctggagata aattcgggcg catcgtccaa gtgcagataa tgcttgatgt
     1801 cggcgcgcgt ggcggcatcg gcggtggcgg tcagggcgat gcgcgggacg ttcggatagc
     1861 gttcggcaag catgccgagc tgttggtact cggggcggaa atcgtgtccc cattggctga
     1921 cgcaatgcgc ctcatcaatg gcgaacaggc tgacggtttg ttggtcgaga aaacgcaaaa
     1981 agcggtcggt aaccaagcgt tccggcgcga cataaagcag tttcagacgg ccttgggcaa
     2041 gcttgtcggc aatctcgcgc gccccatctg ccgatgtgct gctgttgact gccgccgctt
     2101 cgatgccggc ggcgtgcagg tttgccactt ggtcgttcat caacgcaatc agcggcgata
     2161 cgacaaccgc cacgccttcg cgcatcagcg cgggaatctg gtaacacaaa gacttgccgc
     2221 cgcccgtcgg catcagcacc gtcaaactcc cgccgcctgc taaagtattg atgacagcct
     2281 cctgcctgcc gcgaaattcg ggataaccaa atacttcgtg cagaatctgt ttggcggtcg
     2341 gtcggtgcat gatggttccg tgctcggtaa gggtgttggt cggttggcgg caatatgccg
     2401 tctgaaatcg ggatttagaa gagtttgccc acttccgcct caatatcgcc ggcacgcatg
     2461 aacgtttcgc cgatcaggaa ggtgtgcaca ccgcgcgatt gcataaattc cacatccgcc
     2521 ttgcctgtaa tgccgctttc ggttacgacg gttttgcctt ccagcgcggg cagcagcgac
     2581 agggtttggt cgagggagac ttcaaaagtc ctcaggttgc ggttgtttac gccccacaac
     2641 ggcgtggtca ggttgcggca tttttccaat tcggtttcat cgtgcagctc gagcaggacg
     2701 gtcatgccca attcgtgcgc caccgcttca aagcgttcca attgttcctg ttccagtgct
     2761 gcggcaatca gcaggacggc atccgccccc catgcgcgcg cctgataaac ctggtattcg
     2821 tcgatgatga agtctttgcg cagcacgggc agcgatacgg cttcgcgcgc ctgtttgagg
     2881 tattcgggcg aaccttggaa atagggttcg tcggtcagta cggacaaaca cgccgctccg
     2941 gcgttttcat aggcgcgtgc aatctcggca gggcggaagt ccggacggat taaccctttg
     3001 ctcgggcttg cctttttgat ttcggctatg acggcgggca ggtttaggcg gtgtttgccg
     3061 cgtatcgaat cgatgaagct gcggacgggc gcggcttctg cggcaagtgc gcggatgtgt
     3121 tcggcgttga cggcggcttt ttgagcggca acttcctgtg ctttggtggc aaggatttta
     3181 ttgaggatgt cggtcatgtc gggttccgta ttcgtctggg aaagggggaa tattagcatc
     3241 aaaccgttaa cgactgtttg tgcggaagct gtcgaaatag gacaggacgg tctgcggcaa
     3301 ccattgcagg tgcagcctgc cgccggtgct gccgacaaag ccgacatgac caccgtgtgc
     3361 aggttggaac agggtaacgg cttcggacac ttcgtccggt atcggcaggg cttcgggcgg
     3421 caggaagggg tcgttgacgg cattgagcag gagcagcggt ttggcaacgt gtttgagcag
     3481 cggtttgcag gaagtttggc ggtagtagtc gtgccggtcg gcaaagccgt gcagcggtgc
     3541 ggtgaagcgg tcgtcaaact cgcccagtgt tttgcaccct gcggcaaatg ccgtctgaaa
     3601 accttggagc gattttgctt tgggtatcag ggtgcggagg aagtagcgcg tgtagagcag
     3661 ccgcgtgatg ccgctgtcga agcgtctgcc tgccgcctct gcatcgacgg gggcggagat
     3721 gacggcagcg gcttgcggca atgccttttt gccctgttcg cccaaatatt ttgccagcgc
     3781 gttgccgccc agcgatacgc cgacggcgta tatttcacgg taacgcgcgg cgaacgtgtc
     3841 caaagtaaag gcgatttcgg cggtatcgcc caagtggtag aacaccggag cggtgttggc
     3901 aatgccgccg cagctgcgga aatggacgac tacgccgtgc caaccccgat cgcgtaccgc
     3961 aagcatcagt tcgaccgcgt aatggctgcg gctgcttcct tccaaaccgt gaaacagcac
     4021 gaccagcggc gcatcgggcg aaatgccgtc tgaaaagtcg taggcgactt tggttttacc
     4081 cgtgctgtcg ggaagcagct cgcggcggta tgcaggtgcg gggcgttgca ggaatttggc
     4141 ggcaatcgtg tcggcattgc cgttgcggag gaaaaggggc gtgtccggcg gtgtcaaaat
     4201 cataaggtat cggttttctt gttttcagac ggcattgatg atgcggcagc ccgtccggcc
     4261 ggtgcggacg cgggggatgc gcgcccgaat ataggcgtgg aaaaagcgtt tgccgaaaaa
     4321 ggatatcggc atcggtcagc tttccacccg tttgaaatgg cgcggacgga agcccagtgc
     4381 agccagtgat gcgaaataca ggcagcctcc gatgacaatc aggatgaaga gccgggcggc
     4441 cttttgcatt ccgccggtgt gtgtccagtc gaacggcagc cagatttggg cggcatacag
     4501 gccgcctccc atcacggcga gcgcgagcag catttttgcc aagaacgccg cccaaccctt
     4561 gccgggccgg taaataccat gtttgcgcaa caggtaaaac aacaatccgg cattgataca
     4621 cgcgcccaga ccgatggcaa gcgaaagtcc gacgtgtttc agtgggccga taaaggcaag
     4681 gttcatcaac tgcgtgcaaa tgagcgtgaa gatggcgatt ttgacgggcg ttttgatgtt
     4741 ttgccgcgca taaaagccgg gcgccaacac tttaatcatg attaaaccga ttaaaccgaa
     4801 agaataggca atcagcgcgt gttgcgtcat ttgcgcgtca aacagcgtga attcgcggta
     4861 cataaacagc gtcgccacca gcgggaacga caacaccgcc agtccgaccg ccgccggcag
     4921 cgtcagcagc atacacaggc gcaaacccca gtcgagcagg gcggaaaact gttccgtatc
     4981 ttggtttgcc gagtgtttgg acaaagtcgg cagcaaaatc gtaccgagtg ccgcccccag
     5041 cacgccgccg ggcagttcca tcatgcggtc ggcgtaatac atccatgaaa cgctgcccga
     5101 ttgcagataa gacgcgaaaa tcgtgttgat caccaaagaa acctgcgcca cgctcacgcc
     5161 caaaatcgcc ggcgccatct gtttcatcac gcggttgacc gccgcatctt tgaaattcag
     5221 tttgggcagt ttcaaaaagc ccagtttcgc cagccagggc agttggaagc cgagttgcaa
     5281 aataccgccg acaaaaaccg cccatgccag agcggtaacg ggcggatcga aatacggcac
     5341 gaaaaacagc gcgaatacga taaacgacac gttcaggaat gtgggcgtaa acgcgggaat
     5401 gccgaactta tgataggaat tgagtaccga gccgacaaaa gaggaaagtg aaatcaatag
     5461 gatataagga aacgtaatcc gcagcaaatc gatggaaagt tggaacttgt ccgcgtcttg
     5521 ggcaaagccg ggtgcggaaa cataaatcac ccaaggcgcg gcgagtatgc ccagcgcggt
     5581 aacgatgacc agcacaaacg acagcatccc cgccacatgg cggataaaag cctccgccgc
     5641 ctctttagaa cgcgtttcct tatattccgc caaaatcggc acaaacgctt gggcaaacgc
     5701 cccctccgca aacacgcggc gcagcaggtt gggcagtttg aacgcgacaa aaaacgcatc
     5761 cgtcgccata cccgcgccga atgcccgcgc aatgaccgta tcgcgcacaa atcccaaaac
     5821 gcgcgacacc atcgtcaggc tgccgacttt tgccaaagct cccagcatat tcatcattgt
     5881 tcctcaacag tcgtacccgt ttggggcaac ggcgcgtatt gtacgacaga aaccgcttca
     5941 gacggcatcg ggtttgatgc cgtctgaagc ggtttcccga aacgaaaacg tccttttccg
     6001 gcggcaaact gtatcaacac gcggaaatgc aataaaatag ccggattccg attgatttcc
     6061 aacatctgtt tccaacatca cggagagccg tatgaaatcc agacaactcg ccctcggcgt
     6121 tgccgccctg ttcgcccttg ccgcgtgcga cagcaaagtc caaaccagcg tccccgccga
     6181 cagcgcgcct gccgcttcgg cagccgccgc cccggcaggg ctggtcgaag ggcaaaacta
     6241 taccgtcctt gccaacccga ttccccaaca gcaggcaggc aaagtcgaag tccttgagtt
     6301 tttcggctat ttctgtccgc actgcgccca cctcgaacct gttttgagca aacacgccaa
     6361 gtcttttaaa gacgatatgt acctgcgtac cgagcatgtc gtttggcaaa aagaaatgct
     6421 gccgctggca cgtctcgccg ccgccgtcga tatggctgcc gccgacagca aagatgtggc
     6481 gaacagccat attttcgatg cgatggtcaa ccaaaaaatc aagctgcaag agccggaagt
     6541 cctcaaaaaa tggctgggcg aacaaaccgc ctttgacggc aaaaaagtcc ttgccgccta
     6601 cgagtccccc gaaagccagg cgcgcgccga caaaatgcag gagctgaccg aaaccttcca
     6661 aatcgacggt acgcccacgg ttatcgtcgg cggtaaatat aaagttgaat ttgccgactg
     6721 ggagtccggt atgaacacca tcgacctttt ggcggacaaa gtacgcgaag aacaaaaagc
     6781 cgcgcagtaa gcccgtttga aaaatgccgt ctgaaacttg gttttcagac ggcattttga
     6841 ttgggtttaa aacgtaaagc ccgtttccag ttcttcatcg ccgaccagtt cgaccaagag
     6901 cgcgtagagc ggggcgagtt cggcataacg gcgcgatacg cggcgcaggt aattgaggaa
     6961 acgcgggatt tcgggacggt atttgtcttt gccgtcgcgg tagtacaggc gtgcgaagat
     7021 gcctgcaacc ttcaagtgcc gctgcacgcc catccattcg aaccagcggt aaaactcgtc
     7081 aaacgcttcg gggacgggca ggccggcagc ccgcgccttt tcccagtagc ggataaccaa
     7141 gtccaagaca aattcttctt cccattcgat aaaggcatcg cgcaacagcg acaccaaatc
     7201 gtaggaaatc gggccgtaaa gcgcgtcttg gaagtctaaa acgcccggcc tgccgcgcgt
     7261 cagcatcagg ttgcggacga taaagtcgcg gtgcacatag actttgggct gcgccaacag
     7321 gggcggcagc agcgtatcga cggtttgctg ccaaagttgg cgttgtttga atgttaattc
     7381 gcgccccaat tcttttgcga caaaccattc cgggaacagg ttgatttcgc gcaacatcgt
     7441 ttcacggtca tattcgggca aaaccccttc acggctcgcc ttctgcaatt cgaccaactc
     7501 gccgattgcc tccaaaagca gggctttgtg cgccgtttcg ccctgttcct gaagcattgc
     7561 ggtcaaaaac gtcgtattgc caaagtcgtt caataccaca aaccccagat ccgtgtccgc
     7621 gtgcaatacc tgcggcacat tgaccatgtc aaacagtttc tgcactttca aataaggtgc
     7681 gacactcatc ttgtcgggcg gtgcatccat gcagacgaca ctgctgccgt ctgaaaacgt
     7741 tgcacggaaa tagcggcgga aatcagcatc cgccgccgca aaagtcagat cgaagtcccg
     7801 ttcgggataa acggtctgaa gccaattttt cagttcggtt tgccgttgca taacagtact
     7861 aaagcatttc aggttacaat aaacgctatt ctaactggca aaccgacttg aggggcgatt
     7921 ttggctcgtt tattttcact caaaccactg gtgctggcat tgggcctctg cttcggcacg
     7981 cattgcgccg ccgccgatgc cgttgcggcg gaggaaacgg acaatccgac cgccggagga
     8041 agcgttcgga gcgtgtccga acccatacag cctaccagcc tgagcctcgg ttcgacctgc
     8101 ctgttttgca gtaacgaaag cggcagcccc gagagaaccg aagccgccgt ccgaggcagc
     8161 ggcgaagcat ccatccccga agactatacg cgcattgttg ccgacaaggt ggaaggacag
     8221 tcgcaggtgc aggtgcgtgc cgaaggcaac gtcgtcgtcg aacgcaaccg gacgaccctc
     8281 aataccgatt gggcggatta cgaccagtcg ggcgacaccg ttaccgcagg cgaccggttc
     8341 gccctccaac aggacggtac gctgattcgg ggcgaaaccc tgacctacaa tctcgagcag
     8401 cagaccggcg aagcgcacaa cgtccgcatg gaaatcgaac aaggcggacg gcggctgcaa
     8461 agcgtcagcc gcaccgccga aatgttgggc gaagggcatt acaaactgac ggaaacccaa
     8521 ttcaacacct gttccgccgg cgatgccggc tggtatgtca aggcagcctc tgtcgaagcc
     8581 gatcgggaaa aaggcatagg cgttgccaaa cacgccgcct tcgtgttcgg cggcgttccc
     8641 cttttctata cgccttgggc ggacttcccg cttgacggca accgcaaaag cggcctgctt
     8701 gttccctcac tgtccgccgg ttcggacggc gtttcccttt ccgttcccta ttatttcaac
     8761 cttgccccca atctcgatgc cacgttcgcg cccggcgtga tcggcgaacg cggcgcggtc
     8821 tttgacgggc aggtacgcta cctgcggccg gattatgccg gccagtccga cctgacctgg
     8881 ctgccgcacg acaaaaaaag cggcaggaat aaccgctatc aggcgaaatg gcagcatcgg
     8941 cacgacattt ccgacacgct tcaggcgggt gtcgatttca accaagtctc cgacagcggc
     9001 tactaccgcg acttttacgg caacaaagaa atcgccggca acgtcaacct caaccgccgt
     9061 gtatggctgg attatggcgg cagggcggcg ggcggcagcc tgaatgccgg cctttcggtt
     9121 ctgaaatacc agacgctggc aaaccaaagc ggctacaaag acaaaccgta tgccctgatg
     9181 ccgcgccttt ccgccgattg gcgcaaaaac accggcaggg cgcaaatcgg cgtgtccgca
     9241 caatttaccc gcttcagcca cgacagccgc caagacggca gccgcctcgt cgtctatccc
     9301 gacatcaaat gggatttcag caacagctgg ggttacgtcc gtcccaaact cggactgcac
     9361 gccacctatt acagcctcaa ccgcttcggc agccaagaag cccgacgcgt cagccgcact
     9421 ctgcccattg tcaacatcga cagcggcgca acttttgagc ggaatacgcg gatgttcggc
     9481 ggcggagtcc tgcaaaccct cgagccgcgc ctgttctaca actatattcc tgccaaatcc
     9541 caaaacgacc tgcccaattt cgattcgtcg gaaagcagct tcggctacgg gcagctcttt
     9601 cgcgaaaacc tctattacgg caacgacagg attaacaccg caaacagcct ttccgccgcc
     9661 gtgcaaagcc gtattttgga cggcgcgacg ggggaagagc gtttccgcgc cggcatcggt
     9721 cagaaattct atttcaagga tgatgcggtg atgcttgacg gcagcgtcgg caaaaaaccg
     9781 cgcaaccgtt ccgactgggt ggcatttgcc tccggcagca tcggcagccg cttcatcctc
     9841 gacagcagca tccactacaa ccaaaacgac aaacgcgccg agaactacgc cgtcggtgca
     9901 agctaccgtc ccgcacaggg caaagtgctg aacgcccgct acaaatacgg gcgcaacgaa
     9961 aaaatctacc tgaagtccga cggttcctat ttttacgaca aactcagcca gctcgacctg
    10021 tccgcacaat ggccgctgac gcgcaacctg tcggccgtcg tccgttacaa ctacggtttt
    10081 gaagccaaaa aaccgataga ggtgctggcg ggtgcggaat acaaaagcag ttgcggctgc
    10141 tggggcgcgg gcgtgtacgc ccaacgctac gttaccggcg aaaacaccta caaaaacgct
    10201 gtctttttct cacttcagtt gaaagacctc agcagtgtcg gcagaaaccc cgcagacagg
    10261 atggatgtcg ccgttcccgg ctacatcccc gcccactctc tttccgccgg acgcaacaaa
    10321 cgaccctgac cgtcggaaac ccggcaggag caccgttccc gcacaagacg gcattccacc
    10381 gacaacccca aacccgccat caaaggtagg attcaaacga taaggaaaga atgatgaaaa
    10441 tcaaagccct gatgattgcc gccgcattgc tggcagcagc cgatgtccac gccgcaccgc
    10501 aaaaggcaaa aaccgcatcc gccaaagttg ccaaagttgc caaagttgcc aaagttgcca
    10561 aagttgccaa agttgccaaa gttgccaaag ttgccaaagt tgccgccacg gcgcaaaaag
    10621 aagccgcacc cgcacaacag cagggcggta tccgcttttc agacggcatt gccgccgttg
    10681 ccgacaacga agtcatcacg cgccgccggc ttgccgaagc cgttgccgaa gccaaagcca
    10741 acctgcccaa agaggcgcag ataagcgaat ccgagctgtc ccgacaggtg ctgatgcagc
    10801 ttgtcaacca atccctgatt gtacaggcgg gcaaacgccg caacattcaa gcaagcgaag
    10861 cggaaatcga tgccgtcgtc gcaaaaaatt ccgccctcaa aaacctcagc cccgcccaac
    10921 gccgcgattt tgccgacaac atcattgccg aaaaagtccg ccagcaggca gtgatgcaga
    10981 acagccgcgt gagcgaagct gaaatcgatg ccttcctcga gcaggcgcaa aaacaaggca
    11041 tcaccctgcc cgaaggcgca ccgttgcgcc aataccgcgc ccaacacatc ctgattaaag
    11101 ccgacagcga aaacgccgcc gtcggcgcgg aaagcaccat ccgcaaaatc tacggagagg
    11161 cccgcagcgg cacagacttt tccagcctag cgcgccaata ttcgcaagac gcgagcgcgg
    11221 gcaacggcgg agatttgggc tggtttgccg acggcgtgat ggttcccgcc tttgaagaag
    11281 ccgtccacgc gctcaaaccc ggacaggtcg gcgcgcccgt ccgcacccaa ttcggctggc
    11341 atatcatcaa attgaacgaa gtgcgcgatg ccggcacacc tcaggaacgt atccgcaatt
    11401 ccgtgcggca atacatcttc caacaaaaag ccgaacaggc aaccgtcaac ctgttgcgtg
    11461 acctgcattc cggcgcgtat gtcgacatcc gctaaggcgg tttgaagcaa aaagccatac
    11521 cgatcggcaa aaatccgggc ggtatggctt tttggatttc gagttacttt tacaccgtca
    11581 ttcatcattc ccgcgaaagc gggaatctag aaacgaaaag taacaggaat ttatcgggaa
    11641 tggctggagt ttaaaggact ggattcccgc cgtcgcggga atgacgggat tttgggttgt
    11701 ggtaatttat cggaaaaaca aaaaaaccta tgccgtcatt cccgagcagg cgggaatccg
    11761 gttatttaaa actgcagaaa tttatccgaa gcaacaacaa tctttccatc gtcattcccg
    11821 cgtaggcggg aatctaggac gtagaatcta aagaaaccgt tttatccgat aagtttctgt
    11881 accgaagaat ctggatt
//
LOCUS       DAWITQ010000049        11868 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.049, whole genome shotgun sequence.
ACCESSION   DAWITQ010000049 DAWITQ010000000
VERSION     DAWITQ010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11868)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11868)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11868
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.049"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(36..521)
                     /gene="purE"
                     /locus_tag="WIX18_001030"
     CDS             complement(36..521)
                     /gene="purE"
                     /locus_tag="WIX18_001030"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HEZ5238155.1"
                     /translation="MIQIGIIMGSNSDWPVMRQAAQFLEEFGVEYEARVVSAHRTPDL
                     MFQYAETARERGIKAIIAGAGGAAHLPGMVAAKTTVPVLGVPVPSKYLRGEDSLLSIV
                     QMPKGVPVATFAIGEAGAANAALFAVSMLANETPELAQKLADFRAKQEQAVLSMELEQ
                     I"
     gene            complement(569..1285)
                     /locus_tag="WIX18_001031"
     CDS             complement(569..1285)
                     /locus_tag="WIX18_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system YbgF family protein"
                     /protein_id="HEZ5238156.1"
                     /translation="MKTKLPLFIIWLSVSAACSSPVSRNIQDMRPEPQAEAGSSDAIP
                     YPVPTLQDRLDYLEGKIVRLSNEVETLNGKVKALEHAKTHPSGRTYVQKLDDRKLKEH
                     YLNTEGGSASAHTVETAQNLYNQALKHYKSGRFSAAAALLKGADGGDGGSIAQRSMYL
                     LLQSRARMGNCESVIEIGGRYANRFKDSPTAPEAIFKIGECQYRLQQKDIARATWRSL
                     IQAYPGSPAAKRAASAIRKR"
     gene            complement(1285..1953)
                     /locus_tag="WIX18_001032"
     CDS             complement(1285..1953)
                     /locus_tag="WIX18_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-methyltransferase"
                     /protein_id="HEZ5238157.1"
                     /translation="MTTHLSNVAPDLQNYLNAIGEPEHPVLTRLREKTEHHRMGKMAI
                     AREQAAVLVWLAKLIRAEKYLEVGVFTGYSSTVLALALPKHGRITACDINVTFTDTAR
                     QVWNEAGVAHKISLHLQPALLTLDDLIAQGEAGSYDLALIDADKPPTPQYFERCLKLV
                     RQGGIIAIDNILLNGRVMREAASDAPPSVGILKDFNQNLPNDPRIVPITLPVGDGLTL
                     LLKK"
     gene            complement(1964..2149)
                     /locus_tag="WIX18_001033"
     CDS             complement(1964..2149)
                     /locus_tag="WIX18_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3460 family protein"
                     /protein_id="HEZ5238158.1"
                     /translation="MYHYQSEATQFLNRLIEEKPELEQQRLENRGLLWDVELNPEEQE
                     NFEAAKVAKKPYTYYQD"
     gene            2292..4268
                     /gene="mutL"
                     /locus_tag="WIX18_001034"
     CDS             2292..4268
                     /gene="mutL"
                     /locus_tag="WIX18_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HEZ5238159.1"
                     /translation="MPRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAID
                     VELAGGGIRLIRVSDNGSGIHPDDIGLALHRHATSKIKTLNDLEHVASMGFRGEGLAS
                     IASVSRLTLTSRQEDSSHATQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKF
                     LKSENTEYAHCTTMLERLALAHPHIAFSLKRDGKQVFKLPTQSLPERIAAIVGDDFQT
                     ASLEIDSGNGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH
                     NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALADTRADLTE
                     SVSNAGEVLHDITGVTPAPMPSENDSENLFDSASDYPTGNKPDTRNAFGASGKTAPMP
                     YQAARAPQQHSLSLRESRAAMNTYAELYKKTDDIDLELSRLEQARFGNMPSETPAPQT
                     DTPLSDGIPSQSELPPLGFAIAQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQR
                     QENGKLQSQRLLIPVTFATSHEECAALSDHADALAGFGLELSDMGGNTLAVRAVPAML
                     GKADVVSLAKDVLSELAQVGSSQTIEEHENRILATMSCHGSIRAGRRLTLPEMNALLR
                     DMENTPRSNQCNHGRPTWVKLTLKELDALFLRGQ"
     gene            4363..6483
                     /gene="dnaX"
                     /locus_tag="WIX18_001035"
     CDS             4363..6483
                     /gene="dnaX"
                     /locus_tag="WIX18_001035"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HEZ5238160.1"
                     /translation="MAYQVLARKWRPKTFSDLVGQEHVVKALQNALDEGRLHHAYLLT
                     GTRGVGKTTIARILAKSLNCENAQHGEPCGVCESCTQIDAGRYVDLLEIDAASNTGID
                     NIREVLENAQYAPTAGKYKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPH
                     KVPVTVLSRCLQFVLRNMTAQQVADHLAHVLDSEKIAYAPPALQLLGRAAAGSMRDAL
                     SLLDQAIAMGSGSVAEQDVRQMIGAVDKQYLYELLTGIVNQDGEALLAKAQEMAACAV
                     GFDNALGELAILLQHLALIQAVPNALAHDDPDSDILHRLAQTISGEQIQLYYQIAVHG
                     KRDLSLAPDEYAGFMMTLLRMLAFAPLAATSCDANAVIENTELQSPSAQTAEKETAAK
                     KPQPRPETETAQTSVQTASAAAMPSESKTAEPVSNQENNDVPPWEDAPDEAQTAAGTA
                     QTSAKSIQTASEAETPPENQVSKNKAADNETNAPLSETPSENPIQATPNNEAVETETF
                     AHEAPAEPFYGYGFPDNDCPVEDNAEIPPPDWEHAAPADAEEENNADEGSNDENNTPS
                     APPPEFSTENWAAIVRHFARKLGAAQMPAQHSAWTEYHPDTGLMVLAMTAEARATADK
                     KRLDKIRDTLAQAYGLQLTLQTQDWRDEAGRETPAMQDKRVQAEDRQKAQALLEADPA
                     AQKILQAFGAQWQPESLELAANRP"
     misc_feature    5552..5591
                     /gene="dnaX"
                     /locus_tag="WIX18_001035"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01843"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="This ribosomal frameshift element is known only in
                     the genus Neisseria; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /db_xref="RFAM:RF01843"
     gene            6563..6898
                     /locus_tag="WIX18_001036"
     CDS             6563..6898
                     /locus_tag="WIX18_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HEZ5238161.1"
                     /translation="MFGKAGLGGLMKQAQQMQENMKKAQAKLAETEIEGEAGNGLVKI
                     TMTCAHEVRKIDISPDLIQEAADDKEMLEDLILAALKSARGKAEETANKTMGAFTQGL
                     PPGVGDFFR"
     gene            complement(7730..8776)
                     /gene="recA"
                     /locus_tag="WIX18_001037"
     CDS             complement(7730..8776)
                     /gene="recA"
                     /locus_tag="WIX18_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEZ5238162.1"
                     /translation="MSDDKSKALAAALAQIEKSFGKGAIMKMDGSQQEENLEVISTGS
                     LGLDLALGVGGLPRGRIVEIFGPESSGKTTLCLEAVAQCQKNGGVCAFVDAEHAFDPV
                     YARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGIDMVVVDSVAALVPKAEIEGDMG
                     DSHVGLQARLMSQALRKLTGHIKKTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFY
                     SSVRLDIRRTGSIKKGEEVLGNETRVKVIKNKVAPPFRQAEFDILYGEGISWEGELID
                     IGVKNDIINKSGAWYSYNGAKIGQGKDNVRVWLKENPEVANEIDAKIRALNGVEMHIT
                     EGTQDETDGERPEE"
     gene            9030..9794
                     /locus_tag="WIX18_001038"
     CDS             9030..9794
                     /locus_tag="WIX18_001038"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HEZ5238163.1"
                     /translation="MCSCLVVKNTVIGSGRTKIAVPLVARDAAELSAVLEQIKNMPFD
                     IAEFRADFLECAGSIGEVLRHTQTVRDALPDKPLLFTFRRHGEGGSFPCSDDYYFELL
                     DALIESRLPDIIDIELFSGETAVRRAVANAQKNGIAALLCNHEFHRTPPQEEIVCRLK
                     QMEDCGADICKIAVMPQSAEDVLTLLSATLEAKRLAAKPIVTMSMGQTGTVSRLAGQV
                     FGSSITFGSGTQNSAPGQIGVSALRAALDCLESGAD"
     gene            9814..11829
                     /gene="rep"
                     /locus_tag="WIX18_001039"
     CDS             9814..11829
                     /gene="rep"
                     /locus_tag="WIX18_001039"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HEZ5238164.1"
                     /translation="MMKLNPQQLEAVRYLGGPLLVLAGAGSGKTGVITQKIKHLIVNV
                     GYLPHTVAAITFTNKAAAEMQERVAEMLPKSQTRGLTICTFHSLGMKILREEANHIGY
                     KKNFSILDSTDSAKIIGELLGGTGKEAVFKAQHQISLWKNDLKTPEDVVQTASNAWEQ
                     QTARVYASYQETLQSYQAVDFDDLIRLPAVLLQQNSEVRNKWQRRLRYLLVDECQDTN
                     TCQFALMKLLTGAEGMFTAVGDDDQSIYAWRGANMENLRKMQENYPQMKVVKLEQNYR
                     STARILKIANKVIENNPKLFTKKLWSQLGEGEPVKVVACQNEQHEADWVVSQIIKQKL
                     IGGDKTQYADFAVLYRGKHQARIFEEALRGVRIPYRLSGGQSFFDKAEIKDVLSYVRL
                     LANPNDDPAFLRAVTTPKRGIGDVTLGKLNAYAHEHECSLYEAAQTEEALATLNNTNR
                     QHLQAFMDMFGSYRAKAETGEAGEFINSLLEEIDYENHLLASEEGKAGEIKWRNVGDL
                     VSWFARKGGEDGKNIIELAQTVALMTLLEGKDEEETDAVSLSTLHAAKGLEYPYVFLV
                     GCEEGVLPHNDSIEEGNVEEERRLMYVGITRAKRQLTLTHCVKRKKQGIWQFPEPSRF
                     IDEMPQEDLKILGRKGGEPIVSKEEGRRNLADIIGRLDSMKKGGPED"
BASE COUNT         2929 a         3468 c         3084 g         2387 t
ORIGIN      
        1 aatttaagcc actatatatt cgcggacggc gggttttaaa tctgttccaa ttccatactc
       61 aaaacagcct gttcctgttt ggctcggaag tctgccagtt tttgcgccag ttcgggggtt
      121 tcgttggcga gcatggaaac ggcgaacaat gcggcatttg ccgcgcctgc ctcgccgatg
      181 gcgaatgtgg cgacgggtac gcctttgggc atttgtacaa tcgataaaag cgaatcttcg
      241 ccgcgcaggt atttgctggg gacgggtacg cccaaaacgg ggacggtggt cttggcggca
      301 accatgccgg gcaggtgcgc cgcgccgccc gcgcccgcga taatggcttt gatgccgcgc
      361 tcccgtgcgg tttcagcgta ttggaacatt aaatccgggg tgcggtgtgc ggaaacgacg
      421 cgcgcctcat attctacgcc gaactcttca agaaactgcg ctgcctgccg cataacgggc
      481 caatcgctgt tgctgcccat gatgatgccg atttgaatca taaatcctcc ttggtgcgga
      541 tggggtaaaa agcggaaaaa tggaaaaact atcgtttgcg tatggctgag gcggcgcgtt
      601 ttgccgccgg gctgcccggg taagcctgta tcagactgcg ccaagtcgcc cttgcaatgt
      661 ctttctgctg caacctgtat tggcattcgc cgattttgaa tatggcttcg ggcgcggttg
      721 ggctgtcttt gaaacggttg gcgtaacgcc ctccgatttc gatgacggat tcgcagttcc
      781 ccatacgcgc cctgctttgc agcaacaggt acatactgcg ttgcgcgatg ctgccgccgt
      841 cgcctccgtc cgcgcctttc aacagggcgg cagcggcaga aaacctgccg cttttatagt
      901 gtttgagcgc ctgattgtag aggttttgtg cggtttcaac ggtatgtgcg gatgcgctgc
      961 cgccttcggt attgaggtaa tgctctttca acttgcggtc atcgagtttt tggacgtatg
     1021 tcctgccgga agggtgtgtt tttgcgtgtt ccagtgcttt gactttgccg tttaaggttt
     1081 ccacttcgtt cgacagccgg acgattttgc cttccagata gtccaaacgg tcttgcagag
     1141 tgggaacggg atagggaata gcgtccgaac tacctgcctc tgcctgcggt tcgggccgca
     1201 tatcctgaat attgcgggaa acaggggaag aacaggcggc ggacacagac agccaaatga
     1261 taaaaagcgg taatttggtc ttcattattt tttcagaagc agggtcaaac cgtcgccgac
     1321 gggcagggtg atggggacga tgcgcgggtc gttcggcagg ttttgattaa aatctttgag
     1381 gatgccgacg ctgggcggcg catcggaagc cgcttcgcgc atcacccttc cgttcaacaa
     1441 aatattgtcg atggcaatga tgccgccttg ccggacaagc ttgaggcaac gctcgaaata
     1501 ttgcggcgtg ggcggtttgt ctgcgtctat cagtgccaaa tcgtagcttc cggcttcacc
     1561 ctgtgcaatc aaatcatcca atgtcagcaa tgcgggttgc agatgcaggc tgattttatg
     1621 tgccacgcct gcctcgttcc aaacctgacg cgccgtatcg gtaaaggtta cattgatgtc
     1681 gcaggcggta atccgcccgt gttttggcaa cgccaatgca agcacggtgc tgctgtatcc
     1741 ggtaaatacg ccgacttcca gatatttttc cgcgcgaatc agctttgcca gccaaaccaa
     1801 aaccgccgcc tgttcgcgcg caatcgccat tttgcccata cggtgatgct cggtcttctc
     1861 acgcagccgc gtcaaaacgg gatgttcggg ttcgccgatg gcgttcaaat agttttgcag
     1921 gtccggtgcg acattggaca gatgggtcgt catttcggtg ggttcagtct tggtaatagg
     1981 tataaggttt tttcgctact tttgccgcct cgaagttttc ctgttcttcg ggattgagtt
     2041 cgacatccca caaaagcccc cggttttcca aacgctgctg ttccaactca ggtttttctt
     2101 caatcagacg gttgaggaat tgtgtggctt cggattggta gtgatacatc tttgcgctcc
     2161 aattttacgg gatacggcgt gattatactg gtattttcca aacgggataa acggctttta
     2221 tcaagaatac aggcagaaaa gtaaggggtt ttattataga ataaagcgtt tttgcaacgg
     2281 aagcctacct tatgccacgc attgccgccc tgcccgacca tcttgtcaac caaatcgccg
     2341 ccggcgaagt ggtcgaacgc cccgccaacg ccttaaaaga aatcgttgaa aacagcatag
     2401 acgcaggcgc gacggcgatt gatgtcgaac tggcgggcgg cggcatccgt ctcatccgtg
     2461 tcagcgacaa cggcagcggt atccatccag acgacatcgg gcttgcgctc caccgccacg
     2521 ccaccagcaa aatcaaaact ctaaacgatt tggaacacgt tgccagcatg ggctttcgcg
     2581 gcgaaggttt ggccagtatc gcctcagtca gccgcctaac cctgaccagc cgtcaagaag
     2641 acagttcgca cgcgacccaa gtcaaagcag aagacggaaa actcagcagc cctacggcag
     2701 ccgcccaccc cgtcggcacc accatcgaag ccgccgaact cttcttcaat acccctgcgc
     2761 ggcgcaagtt cctcaaatcc gaaaacaccg aatacgccca ctgcaccacc atgctcgaac
     2821 gccttgcact ggcgcatcct cacattgcct tctcactcaa acgcgacggc aaacaagtat
     2881 tcaaactccc aacccaaagc ttgcctgaac ggattgccgc cattgtcggc gatgattttc
     2941 agacggcttc attggaaatt gacagcggca atggcgcatt gcggctctat ggcgcaattg
     3001 ccaagccgac ttttgccaaa ggcaaaactg acaaacaata ctgcttcgtc aaccatcgtt
     3061 ttgtccgcga caaagtgatg ctccacgccg tcaaacaggc ataccgcgac gtattgcaca
     3121 acgcccttac ccctgctttc gtcctctttc tcgacctgcc gcccgaagcc gtggatgtca
     3181 acgtccaccc gaccaaaacc gaaatccgct tccgcgacag ccggcaggtg caccaactcg
     3241 tgttccacac gctcaacaaa gcccttgccg acacacgcgc cgacttgacc gaaagcgtca
     3301 gcaacgcagg cgaagtgttg catgacatta ccggcgttac gcctgcccca atgccgtctg
     3361 aaaacgacag cgaaaatctg tttgatagcg catccgacta cccgacaggc aacaaacccg
     3421 atacacgcaa tgcctttggt gcatcaggca aaaccgcgcc catgccttac caagccgcgc
     3481 gtgcgccgca acaacacagc ctgtccctgc gcgaaagccg cgcggccatg aatacttacg
     3541 ccgagcttta caaaaaaact gacgacatcg accttgagtt gagccgatta gagcaggcac
     3601 gtttcggcaa tatgccgtct gaaacgcctg ctccccaaac agatacgccg ctttcagacg
     3661 gcatcccatc ccaatccgaa ctaccgccgc tcggttttgc cattgcccaa ttactaggca
     3721 tctacattct tgcccaagcc gaagacagcc tgttgctcat cgatatgcac gccgccgccg
     3781 aacgcgtcaa ctacgaaaaa atgaaacgcc aacgtcagga aaacggcaaa ctacaaagcc
     3841 aacgcctgct tattcccgta accttcgcca cgtcccacga agaatgcgcc gccctctccg
     3901 accatgccga tgcactggca ggcttcggct tggaattgtc cgacatgggc ggcaataccc
     3961 ttgccgtccg cgcagttccc gccatgctag gtaaagccga cgtcgtttca ctggccaaag
     4021 atgtattgag cgaacttgcc caagtcggca gcagccaaac catcgaagaa cacgaaaacc
     4081 gcatcctcgc cactatgtcc tgccacggct cgatccgcgc cggccgccgg ctcaccctgc
     4141 ccgaaatgaa cgcccttctg cgcgatatgg aaaatacgcc gcgcagcaac cagtgcaacc
     4201 acggcaggcc gacttgggtc aaactgactt tgaaagaatt ggacgcactg ttcttgcgcg
     4261 gacagtaagc cgaaagtgct agaatacgcc gcccgagacc gccgttcaga cggcattccg
     4321 acgcaccgac agaaacatca cgaccgaaac caagagaaaa acatggccta tcaagttctc
     4381 gcccgaaaat ggcggcccaa aaccttttcc gacctagtcg gtcaggaaca cgtcgtcaaa
     4441 gccctgcaaa atgccttgga cgaaggcagg ctgcaccacg cctacctgct gaccggtacg
     4501 cgcggcgtgg gcaaaaccac catcgcccgc atccttgcca aaagcctcaa ctgcgaaaac
     4561 gcgcaacacg gcgaaccttg cggcgtatgc gaaagctgta cgcagatcga tgccggacgc
     4621 tatgtcgacc tgctcgaaat cgacgccgcc tccaacacag gcatcgacaa catccgcgaa
     4681 gtcttggaaa acgcccaata cgcgccgacc gccggcaaat acaaagtcta tatcatcgac
     4741 gaagtgcata tgctttccaa aagcgcgttc aacgctatgc tcaaaacgct ggaagagccg
     4801 cccgaacacg tcaaattcat ccttgccacg accgatccgc acaaagtccc cgttaccgta
     4861 ttaagccgct gcctgcaatt cgtcttacgc aatatgaccg cgcagcaggt tgccgaccac
     4921 cttgcccacg tcctcgacag cgaaaaaatc gcctacgccc cccccgccct gcaacttttg
     4981 ggacgcgccg ccgccggatc gatgcgcgat gccttgagcc tgctcgacca agccatcgcc
     5041 atgggttcgg gcagcgttgc cgaacaagac gtccgccaaa tgatcggtgc ggtcgataaa
     5101 caatacctgt acgaactgct gacaggcatc gtcaaccaag acggcgaagc cctgctggca
     5161 aaagcacagg aaatggctgc gtgtgccgtc ggctttgaca acgccttggg cgaacttgcc
     5221 atactgctgc aacacctcgc cctgatacag gcagtgccga atgccttggc gcacgacgac
     5281 cccgattccg atattttgca ccgcctcgcc caaaccataa gcggcgaaca aatccagctt
     5341 tactaccaaa tcgccgtcca cggcaaacgc gacctgagcc tcgcccccga cgaatacgcc
     5401 ggctttatga tgaccctgct gcgtatgctg gcgttcgcac ccttggcggc aacatcgtgt
     5461 gatgcaaacg ccgtgattga aaataccgaa cttcaatccc catcggcaca aaccgccgaa
     5521 aaggaaaccg ccgcaaaaaa gccccaaccg cgccctgaaa cggaaaccgc ccaaacatcc
     5581 gttcagacgg catccgcagc ggcaatgccg tctgaaagca aaactgccga acccgtttcc
     5641 aatcaagaaa acaacgatgt tccgccttgg gaagacgcgc cggacgaagc ccaaaccgca
     5701 gccggcacgg cgcaaacgtc ggcaaaaagc attcagacgg catccgaagc cgaaacgccg
     5761 cccgaaaacc aagtttccaa gaacaaggca gccgacaacg aaaccaatgc ccccttgtcc
     5821 gaaacgccgt ctgaaaaccc cattcaggca acaccgaata atgaagccgt tgaaacggaa
     5881 acatttgcac acgaagcccc tgcagaacct ttctacggtt acggctttcc ggataatgac
     5941 tgccccgtag aagacaacgc agaaatcccg ccgcccgatt gggaacacgc cgcccctgcc
     6001 gatgcggaag aagaaaacaa cgccgacgaa ggcagcaacg acgaaaacaa cacgccgtcc
     6061 gccccgccgc ccgaattttc caccgaaaac tgggcagcca tcgtccggca tttcgcccgc
     6121 aaactcggcg cggcgcaaat gccggcgcaa cactccgcgt ggacggaata ccatcccgac
     6181 accggcctga tggttttggc gatgaccgcc gaagcccgcg ccaccgccga caaaaaacgc
     6241 ctcgacaaaa tccgcgacac ccttgcccaa gcctacgggc tgcaactcac cctgcaaacc
     6301 caagactggc gcgacgaagc cggcagggaa acccccgcga tgcaggacaa gcgcgtccaa
     6361 gccgaagaca ggcaaaaagc acaagcattg ctcgaagccg accccgccgc acaaaaaatc
     6421 ctccaagcat tcggcgcgca atggcagccc gaatcactgg aattggcagc aaaccggccg
     6481 taaacagata taatgccgcc cgaacccttc ggacggcatt gccgtttccc tcattcaatc
     6541 aaaacagaca ggagtattca gtatgttcgg aaaagccgga ttaggcggcc tgatgaaaca
     6601 ggcgcagcaa atgcaggaaa atatgaaaaa agcgcaagcc aaacttgccg aaaccgaaat
     6661 cgaaggcgaa gcaggcaacg gcctggtcaa aatcacaatg acctgcgcgc acgaagtacg
     6721 caaaatcgac atcagccccg atttgattca agaagccgcc gacgacaaag aaatgctcga
     6781 agacctcatc ctcgccgccc tcaaatccgc ccggggcaaa gccgaagaaa ccgcaaacaa
     6841 aacaatgggc gcattcacgc aaggtctacc ccccggagtg ggcgacttct tccgctgatc
     6901 cccgaccgtc attcccacgc aggcgggaat ctagaacgta gaatctgaga aaccgtttta
     6961 ctcgataaat ttccgtgccg aggggtctgg attcccgcct tcgcgggaat gacggcatca
     7021 gtttgcaaga ttcggcgtga acggtaaaaa cagtgagaat gataagaacg caaaaacggc
     7081 aagaatagcg ggaatcggca ggctgaagcc caccctacca ttatttacac atccgtaccg
     7141 cttaaatgcc gtctgaaact tcgtcattcc cgtgaaaacg ggaatccaac cccgtgggag
     7201 cagaaactta caccccgtca ttcccgcgaa cgcgggaatc cagtaaccga aaaaccacag
     7261 gaatctatcg gaaaaacaga aaccctcgac cgtcattccc gcgaacgcgg gaatccagta
     7321 accgaaaaac cacgggaatc tatcggaaaa aacagaaacc ctcgaccgtc attcccgcga
     7381 acgcgggaat ctagaacgta gaatctgaga aaccgtttta ctcgataaat ttccgtgccg
     7441 acaggtttgg attcccgcct tcgcgggaat gacggcatat tttttgcatt tgatataaag
     7501 gggcgtttga attttgttca gcaagtgcaa agtgttgcac ataaaaaggc gcaggcttca
     7561 tccgtaaagt cggcgcagga tagaggcaaa gcgggcgtag gtcgggctgt agcaactgta
     7621 tttttcaccc cgtcgggcaa aaataccaaa actcaaatca agccgttcgg aggcggctca
     7681 aaaaaacggt acttcgcagc agaagtaccg tttatcggga tttcaggttt tattcttcgg
     7741 ggcgttcgcc gtcggtttcg tcctgcgtcc cttcggtgat gtgcatttct acgccgttga
     7801 gggcgcggat ttttgcgtcg atttcattgg cgacttcggg attttccttc agccagacgc
     7861 ggacgttgtc tttgccctga ccgattttcg cgccgttgta gctgtaccac gcgccggatt
     7921 tgttgatgat gtcgtttttc acgccgatgt cgatcaattc gccttcccaa ctgatgcctt
     7981 ctccgtagag gatgtcaaac tctgcctgac ggaacggggg ggcgactttg tttttgatga
     8041 ctttgacgcg ggtttcgttg cccaatacct cttcgccttt tttgatggat ccggtgcggc
     8101 ggatgtcgag gcggacggaa gaatagaatt tcagcgcgtt gccgccggtg gtggtttcgg
     8161 ggctgccgaa cattacgccg atcttcatcc ggatttggtt gatgaacaca accagcgtgt
     8221 tggttttttt gatgtgtccg gtcagtttgc gcaaagcctg gctcatcagg cgcgcctgca
     8281 gtccgacatg gctgtccccc atatcgcctt cgatttcggc tttggggacg agtgcggcta
     8341 cggaatcgac gactaccata tctatgccgc ccgaacggac gagtgtgtcg cagatttcca
     8401 aagcctgttc gccggtatcg ggctgggaca ggtaaagctc ttcgactttt acgccgagtt
     8461 tgcgggcgta aacgggatca aaggcgtgtt cggcatcgac aaaggcgcac acgccgccgt
     8521 ttttctggca ttgggcgacg gcttcgaggc agagggtggt tttgccggag gattcggggc
     8581 cgaagatttc gacgatgcgc ccgcgcggca gaccgccgac tccgagggcg aggtctaatc
     8641 cgagcgatcc ggtggaaatg acttcgaggt tttcttcctg ctggctgccg tccattttca
     8701 tgatggcgcc tttgccgaaa cttttttcga tttgcgccag tgcggcggca agggctttgc
     8761 ttttgtcgtc tgacattggg gttactccgg aacaaatgcg gtatgtggga tgcggcgcaa
     8821 cacgggctgc ggcgcgggat gtgtatcgtt ttcccgatgt gcgggctatc ggtaatgctg
     8881 cttcacgggg ttgccattat cgcatatttc cttgcttgcc gatatgcggc aggacgcggc
     8941 ggcttgtgcc ggaatggaat ctggatgccg tctaaaaggc ggccggcttt gttataatgg
     9001 cggctgtttt ttctgtgtgt gcctgtttta tgtgttcctg ccttgttgtc aaaaataccg
     9061 ttatcggaag cggacgcacc aaaatcgccg tgccgcttgt cgcccgcgat gctgccgaac
     9121 tttccgccgt acttgagcaa atcaaaaata tgcccttcga tattgcggag ttccgcgccg
     9181 actttttgga atgcgcgggc agcatcggcg aagtattgcg ccacacgcag accgtccgcg
     9241 acgcgctgcc cgacaaaccg ctgctgttta cgttcagacg gcatggcgaa ggcggctcgt
     9301 tcccgtgttc ggacgattat tattttgaac tgctcgacgc gctgatcgaa agccgcctgc
     9361 ccgacatcat cgacatcgag ctgttttccg gcgaaaccgc cgtccggcgc gccgtggcaa
     9421 atgctcaaaa aaacggcatc gccgccctac tctgcaatca tgagtttcac cgcacgccgc
     9481 cgcaagaaga aatcgtatgc cgtctgaaac agatggagga ctgcggcgcg gacatctgca
     9541 aaattgcggt gatgccgcaa agcgcggaag atgtgctgac tttgctttcc gccacgctcg
     9601 aagcgaaacg gcttgccgcc aaaccgattg ttacaatgtc gatgggacag acggggacgg
     9661 tcagccggct tgccggacag gtgttcggct caagcatcac gttcggttcg ggaacgcaaa
     9721 actccgcgcc ggggcaaatc ggcgtatccg ccctccgtgc ggcactcgac tgtctcgaaa
     9781 gcggcgcaga ctgatttcag acggcatcaa aacatgatga aactcaatcc ccaacagctc
     9841 gaagccgtcc gttacctcgg cggccccctg ctcgtccttg ccggtgcagg cagcggcaaa
     9901 accggcgtaa ttactcaaaa aattaagcat ttgattgtca atgtcggcta tctgccgcat
     9961 accgtcgccg caattacctt taccaacaaa gccgctgcgg aaatgcagga gcgcgtcgcc
    10021 gaaatgctgc ccaagtcgca aacgcgcggg ctgacaattt gcacgttcca ttctttgggc
    10081 atgaagattt tgcgcgaaga ggcgaaccat atcggttaca aaaaaaactt ttccatcctc
    10141 gattccaccg acagcgcgaa aatcatcggc gaacttttgg gcggtacggg caaagaagcc
    10201 gtattcaagg cgcagcacca gatttccttg tggaaaaacg atttaaaaac gcctgaagat
    10261 gtcgttcaga cggcctctaa tgcgtgggaa caacaaaccg cacgcgtgta tgcgagctat
    10321 caggaaacct tacaaagcta tcaggcagtg gacttcgatg acttaatccg cctgcctgcc
    10381 gtgctgttgc agcaaaacag cgaagtgcgc aacaaatggc agcggcggct gcgttatctg
    10441 ctggttgacg aatgccaaga tacgaatacc tgccaatttg cgctgatgaa actcttgacc
    10501 ggtgcggaag gtatgtttac cgccgtcggc gacgacgacc agtccatcta cgcgtggcgc
    10561 ggtgcgaata tggaaaacct gcgcaaaatg caggaaaact atccgcagat gaaggtcgtc
    10621 aaactggagc aaaactaccg ctccaccgcg cggattctta aaatcgccaa caaagtcatc
    10681 gaaaacaacc ccaagctgtt taccaaaaaa ctttggtcgc aattgggcga aggcgagccg
    10741 gtcaaagtcg ttgcctgcca aaacgagcaa cacgaagccg actgggtcgt cagccaaatc
    10801 atcaaacaaa aactcatcgg cggcgacaaa acccaatacg ccgatttcgc cgtgttatac
    10861 cgcggaaagc atcaggcgag gattttcgag gaagcattgc gcggcgtgcg catcccctac
    10921 cggctctccg gcggacaaag ctttttcgac aaagccgaaa tcaaagacgt gttgtcttat
    10981 gtgcggctgc ttgccaaccc caacgacgat cccgcctttc tgcgcgccgt aaccacgccc
    11041 aaacgcggca tcggcgatgt aacgctgggc aagctcaacg cctacgcgca cgaacacgaa
    11101 tgcagcctgt atgaagccgc gcaaaccgaa gaagcccttg ccacgctgaa caataccaac
    11161 cgccaacacc tgcaagcctt tatggatatg ttcggcagct accgcgccaa agccgaaaca
    11221 ggcgaagcag gcgagttcat caacagcctg ctcgaagaaa tcgactatga aaaccacctg
    11281 cttgccagtg aagaaggcaa agctggcgaa atcaaatggc gcaacgtcgg cgatttggta
    11341 tcatggtttg cgcgaaaagg cggggaagac ggcaaaaaca tcatcgaact cgcccaaacc
    11401 gtcgccttga tgacgctttt ggaaggaaaa gacgaagaag aaaccgatgc cgtctcgcta
    11461 tccacgctac acgccgccaa aggtttggag tatccctatg ttttccttgt cggttgcgaa
    11521 gaaggtgttt tgccgcacaa cgacagcatc gaagaaggca acgtcgaaga agaacgccgc
    11581 ctgatgtacg tcggcatcac ccgcgccaaa cgccagctta cgctgaccca ctgcgtcaaa
    11641 cgcaaaaaac aaggcatatg gcagttcccc gaacccagcc gattcataga cgaaatgccg
    11701 caggaagatt tgaaaatcct ggggcgcaaa ggcggcgaac cgattgtcag caaagaagaa
    11761 ggcagacgca accttgccga tataatcgga aggctcgaca gcatgaaaaa aggcggtccg
    11821 gaggattaaa ccaagatagg gaaacgaagc cggagacaat gtatagtg
//
LOCUS       DAWITQ010000050        11744 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.050, whole genome shotgun sequence.
ACCESSION   DAWITQ010000050 DAWITQ010000000
VERSION     DAWITQ010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11744)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11744)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11744
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.050"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(354..776)
                     /locus_tag="WIX18_001040"
     CDS             complement(354..776)
                     /locus_tag="WIX18_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEZ5238165.1"
                     /translation="MQVTSKWIDGMCFVGTTEGGHSVVMEGSAAEGKAKRGPSPLEML
                     LLGVAGCSSIDVVMIAEKQRQKVTDCRATVTAKRADDAPRVFTEIHIHFKVFGHDLKE
                     SAIERAVQMSAEKYCSASIMLGKAAKITHSFEIAGADK"
     gene            complement(894..1565)
                     /locus_tag="WIX18_001041"
     CDS             complement(894..1565)
                     /locus_tag="WIX18_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HEZ5238166.1"
                     /translation="MMKTFKNIFSAAILSAALPCAYAAGLPQSAVLHYSGSYGIPATM
                     TFERSGNAYKIVSTIKVPLYNIRFESGGTVVGNTLHPTYYRDIRRGKLYAEAKFADGS
                     VTYGKAGESKTEQSPKAMDLFTLAWQLAANDAKLPPGLKITNGKKLYSVGGLNKAGTG
                     KYSIGGVETEVVKYRVRRGDDTVMYFFAPSLNNIPAQIGYTDDGKTYTLKLKSVQING
                     QSAKP"
     gene            complement(1581..2207)
                     /locus_tag="WIX18_001042"
     CDS             complement(1581..2207)
                     /locus_tag="WIX18_001042"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HEZ5238167.1"
                     /translation="MKNIVILISGRGSNMQAIVNAAIPNVRIAAVLSNSETAAGLQWA
                     AGQGIPTDSLNHKNFESRLAFDTAMMEKIDAYQPDLVVLAGFMRILTPEFCAHYEGRL
                     MNIHPSVLPSFTGLHTHERALEAGCRVAGCTIHFVTAELDCGPIVSQGIVPILDGDTA
                     DDVAARVLAVEHKLYPKAVADFAAGRLIIEGNRVRNSENADAARFLTA"
     gene            complement(2314..3132)
                     /locus_tag="WIX18_001043"
     CDS             complement(2314..3132)
                     /locus_tag="WIX18_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ5238168.1"
                     /translation="MNTIFKISALTLSAALALSACGKKEAAPASASEPAAASSAQGDT
                     SSIGSTMQQASYAMGVDIGRSLKQMKEQGAEIDLKVFTEAMQAVYDGKEIKMTEEQAQ
                     EVMMKFLQEQQAKAVEKHKADAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGE
                     GKQPTKDDIVTVEYEGRLIDGTVFDSSKANGGPVTFPLSQVIPGWTEGVQLLKEGGEA
                     TFYIPSNLAYREQGAGDKIGPNATLVFDVKLVKIGAPENAPAKQPAQVDIKKVN"
     gene            complement(3391..3831)
                     /locus_tag="WIX18_001044"
     CDS             complement(3391..3831)
                     /locus_tag="WIX18_001044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HEZ5238169.1"
                     /translation="MPKATFYTHVAQVPIFTCRLIARAIRDGGRILVWSDSFGQLQEL
                     DKMLWQYEAESFIPHEIWEMEEAMPSETSVLLACGGNPPRIPEGMTVLNLSDGFWNTA
                     PVLPARVLEIVGNSLEDLADARERFTAYRRSGFAIEHHGMEGKA"
     gene            complement(3894..5300)
                     /locus_tag="WIX18_001045"
     CDS             complement(3894..5300)
                     /locus_tag="WIX18_001045"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HEZ5238170.1"
                     /translation="MEFSTKTEILQEQQAGAQLFVCTEEAQLNHPTALALLSSLEEGQ
                     NFADTKIPTGNGLQAVAVCCLKSTGRAALNKAAAEAAKWAQNQETVNVDIHAFDEAQA
                     AAVAEAFAIAFGNAAYRFDRYKKEAKPAKFETAVFHSAHEAVVKEALRVAEAQVYGQS
                     LCRDLGNAAPNECTPEFLARTAKAEAEKLGAHAKIIEKDYIKENMGSFWSVAKGSAEA
                     PYLVELSYFGAADKEAAPVVLVGKGITFDTGGISLKPGLNMDEMKFDMCGAATVISTF
                     CAAVKLQLPINLIAVVATCENMPSGAANKPGDVVKSMKGLTIEVLNTDAEGRLILCDA
                     LTYAEQFKPKAVIDVATLTGACIVALGHDVSGVMGNNQDLIDSLLAASYNVDDKAWQL
                     PLFETYKDQLKSNFADIPNIGTPGAGTITAATFLSYFTEGYPWAHLDIAGTAWKSGAE
                     KGATGRPVPLLLNYLRNL"
     gene            5470..6585
                     /gene="lptF"
                     /locus_tag="WIX18_001046"
     CDS             5470..6585
                     /gene="lptF"
                     /locus_tag="WIX18_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HEZ5238171.1"
                     /translation="MIYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVA
                     IDAVLALVGFWVIGMTPLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPV
                     MQFAVPFAVLVAVMQLWVIPWAELRSREYAEILKQKQELSLVEAGGFNSLGKRNGRVY
                     FVETFDTESGIMKNLFLREQDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPG
                     RADYNQVSFQKLNLIISTTPKLIDPVSHRRTIPTAQLIGSSNPQHQAELMWRISLTVS
                     VLLLCLLAVPLSYFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLP
                     MHIIMFVIAIVLLRVRSMPSQPFWQAVGKSLTLKGGK"
     gene            6582..7652
                     /gene="lptG"
                     /locus_tag="WIX18_001047"
     CDS             6582..7652
                     /gene="lptG"
                     /locus_tag="WIX18_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HEZ5238172.1"
                     /translation="MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSY
                     GIWEMLGYTALKMPARAYELIPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLI
                     LSQFGFIFAIATVALGEWVAPTLSQKAENIKAAAINGKISTGNTGLWLKEKNSIINVR
                     EMLPDHTLLGIKIWARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSI
                     AAEENWPISVKRNLMDVLLVKPDQMSVGELTTYIRHLQNNSQNTRIYAIAWWRKLVYP
                     AAAWVMALVAFAFTPQTTRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGIPPFLA
                     GALPTIAFALLAVWLIRKQEKR"
     gene            7952..10537
                     /gene="acnB"
                     /locus_tag="WIX18_001048"
     CDS             7952..10537
                     /gene="acnB"
                     /locus_tag="WIX18_001048"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HEZ5238173.1"
                     /translation="MLEAYRKAAAERAALGIPALPLTAQQTADLVELLKSPPAGEGEF
                     LVELLAHRVPPGVDDAAKVKASFLAAVAEGSASSPLISPEYATELLGTMLGGYNIHAL
                     IELLDDDKLAPIAAKGLKHTLLMFDSFHDVQEKAEKGNKYAQEVLQSWADAEWFASRA
                     KVPEKITVTVFKVDGETNTDDLSPAPDAWSRPDIPLHALAMLKNPRDGITPDKPGEVG
                     PIKLLEELKAKGHPVAYVGDVVGTGSSRKSATNSVIWHTGEDIPFVPNKRFGGVCLGG
                     KIAPIFFNTQEDSGALPIEVDVSALKMGDVVDILPYEGKIVKNGETVAEFELKSQVLL
                     DEVQAGGRINLIIGRGLTAKAREALKLPASTAFRLPQAPAESKAGFTLAQKMVGRACG
                     LPEGQGVRPGTYCEPRMTTVGSQDTTGPMTRDELKDLACLGFSADMVMQSFCHTAAYP
                     KPVDVKTHKELPAFISTRGGVSLRPGDGVIHSWLNRLLLPDTVGTGGDSHTRFPIGIS
                     FPAGSGLVAFAAATGVMPLDMPESVLVRFSGKLQPGVTLRDLVNAIPLYAIKQGLLTV
                     AKAGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTVKLNKEPIIEYMKSN
                     VVLMKNMIANGYQDPRTLERRIKAMEKWLANPELLEADKDAEYAAVIEINMDDIKEPI
                     IACPNDPDDVCFMSERSGTKIDEVFIGSCMTNIGHFRAASKLLEGKADTPVRLWIAPP
                     TKMDAKQLSDEGHYGVLGRAGARMEMPGCSLCMGNQAQVREGATVMSTSTRNFPNRLG
                     KNTFVYLGSAELAAICSKLGKIPTVEEYQANIGIINEQGDKIYRYMNFNEIDSYNEVA
                     ETVNV"
     gene            10679..11674
                     /locus_tag="WIX18_001049"
     CDS             10679..11674
                     /locus_tag="WIX18_001049"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEZ5238174.1"
                     /translation="MNLKNRHFLKLLDFTPEEITAYLDLAAELKAAKKAGREIQRMKG
                     KNIALIFEKTSTRTRCAFEVAARDQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDA
                     IEYRGFGQEVVEELAKYAGVPVFNGLTNEFHPTQMLADALTMREHSGKPLNQTAFAYV
                     GDARYNMGNSLLILGAKLGMDVRIGAPQSLWPSEGIIAAAHAAAKETGAKITLTENAH
                     EAVKNVDFIHTDVWVSMGEPKEVWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAF
                     HNRETKVGEWIYETFGLNGVEVTEEVFESPASIVFDQAENRMHTIKAVMVAALGD"
BASE COUNT         2692 a         3264 c         3056 g         2732 t
ORIGIN      
        1 aaggcgaggc aacgccgtac tggtttttgt taatccacta taattcaata aattaatata
       61 tggcttaaaa taacgggatg cccgcctccc gtcctcctgc agaagcgggc gggtatcatt
      121 ttaaaacgcg gcatttaaaa tttgaccgaa aattgttgac aatccggaat caagtctgca
      181 caataccccg acaagtccaa gtattataaa ggctgaataa agaggaaaca gcaggcagat
      241 atattcggga ggtgcagtcc gaatatatct gcttttttat gcgcctccgg attgcctgcc
      301 gcacctttcc cttcagacgg catcagccgt ttccccataa tgccgcccga tgcctattta
      361 tctgccccgg caatttcaaa actgtgggta atctttgccg ctttgcccaa cataatcgaa
      421 gccgaacagt atttttcggc agacatctga acggcgcgct caatggccga ttctttcaaa
      481 tcatgcccga atactttgaa atggatgtgg atttcggtaa acacgcgcgg cgcatcgtcc
      541 gcccgtttcg ccgtaaccgt cgcacggcag tcagtcactt tctgacgctg tttttcggca
      601 atcatcacca catcgatgct cgaacagccc gccacgccca acagcagcat ttccaaaggg
      661 ctgggcccgc gcttagcctt accttctgcc gccgacccct ccataacgac gctgtgcccg
      721 ccttccgttg ttccgacaaa gcacattccg tctatccatt ttgatgtaac ctgcatggtg
      781 tcattcctga aaatagcgtt aaaaccgctt tgcatatggc gttattgtaa acaatttcaa
      841 gcggcttatg cagaaatatg gacaaaacgg caaaaaaacg cctgaaaatc gatttacggt
      901 ttggcggact ggccattgat ctgcaccgat ttgagtttca gcgtataggt tttgccgtcg
      961 tcggtatagc cgatttgtgc cggaatattg ttcagggacg gtgcgaagaa atacattacc
     1021 gtatcgtcgc cgcgccgcac ccgatatttg acgacttcgg tttccacgcc gcctatgctg
     1081 tattttcctg tacccgcctt attcaaaccg ccgacggaat aaagtttttt gccgttggtg
     1141 attttcagcc ccggggggag tttcgcgtca tttgccgcca actgccaggc aagcgtgaac
     1201 aaatccatag ccttggggct ttgctcggtt ttgctctcgc ccgctttgcc gtaggttacg
     1261 ctgccgtcgg cgaatttggc ttccgcatac agtttgcccc tgcgtatgtc tctatagtag
     1321 gtagggtgca gggtattgcc gacaaccgta ccgccggact cgaaacggat attgtatagc
     1381 ggcactttaa tcgtcgaaac gattttgtaa gcattgccgc tgcgttcaaa tgtcatcgtg
     1441 gcgggaatgc cgtagctgcc ggaatagtgc agcacggcgg attggggcag ccctgccgca
     1501 tacgcgcacg gcagggcggc ggacaaaatg gcggcggaaa atatattttt aaaagtcttc
     1561 atcatttgct cccgcccggt ttacgccgtc aggaaacggg cggcatcggc gttttccgaa
     1621 tttctgacgc ggtttccctc gataatcagg cggccggcgg caaaatcggc aacggctttc
     1681 ggatagagtt tgtgttcgac agccaaaacc cgggcggcaa catcgtctgc cgtatcgccg
     1741 tcgagtatcg gcacaatccc ttgcgataca atcgggccgc aatccagttc ggcagtaacg
     1801 aaatggatgg tgcagccggc aacgcggcag cccgcctcca aagcgcgttc gtgcgtatga
     1861 agtccggtaa acgagggcag gacggacggg tgaatgttca tcagcctgcc ttcgtaatgg
     1921 gcgcaaaact caggggtcag aatccgcata aaacctgcca aaaccaccaa gtcgggttga
     1981 tatgcgtcga ttttttccat catggcggta tcgaaggcaa gtcgtgattc aaagttttta
     2041 tgattcaggc tgtcggtcgg aataccctga ccggccgccc attgcaaacc ggcagccgtt
     2101 tcgctgttgc tcaacacggc ggcaatacgg acgttgggaa tggcggcatt gacgattgcc
     2161 tgcatattgc tgccgcgtcc ggaaatcagg atgacgatgt ttttcataat ggtgcgcttt
     2221 tgaaagggat gccatctgaa ccgctgtttg gtggtttcag acggcatttg ccgtaaaaat
     2281 gcccgaaaac ctgtttcggg catggattcg gacttaattt acttttttga tgtcgacttg
     2341 agccggctgc ttggcgggcg cgttttcggg tgcgccgatt ttgaccagtt tcacatcaaa
     2401 taccaaagtg gcgttcggac cgattttgtc gcccgcaccc tgttcgcggt aggcaaggtt
     2461 ggacgggatg tagaacgtgg cttcgccgcc ttctttcaga agctgtacgc cttcggtcca
     2521 acccggaatc acttggctca aagggaaggt gaccgggccg ccgttggctt tgctgctgtc
     2581 gaataccgta ccgtcaatca ggcggccttc gtattccacg gtaacgatgt cgtctttggt
     2641 cggctgtttg ccttcaccct gtttggtgat tttgtattgc aggccggaag cagtggtctt
     2701 cacgccgtct ttggcggcat tttctttcag aaaggcttcg cctttttctt tattggcctt
     2761 cgcgtccgcc ttgtgttttt ctacggcttt agcctgttgt tcctgaagga atttcatcat
     2821 gacttcctga gcctgctctt cggtcatttt gatttctttg ccgtcataca ctgcctgcat
     2881 ggcttcggta aagactttca aatcgatttc cgcgccctgt tccttcattt gcttcaggga
     2941 gcgtccgatg tccacgccca tcgcatagct tgcctgctgc atcgtgctgc cgatcgaaga
     3001 ggtgtcgccc tgcgcggaag aagcggcggc aggttcggat gcagatgcgg gggcggcttc
     3061 ttttttgccg caggcggaaa gtgccaaagc ggcggaaagg gtcagtgcgc tgattttgaa
     3121 aatggtgttc atgatggatc ttcgctgtcg ataaggtcgg aaaaacggga ttatagccga
     3181 gtttgaatgt ttcaacacac aggatgacac ataaagcgtc aatcgtgtgt tgccctgttt
     3241 tggaaaggat tgaaccttcc aaaataagtt ttgattctac cgccccgagg gacagatgtc
     3301 caagtggcgg ggttcaaccg ataaggaaat tttaatcaaa tagaatcaag cctgtttaaa
     3361 ttttgtaaat gcggcatttc agacggcatt ttatgccttg ccctccatgc cgtgatgttc
     3421 gatggcaaaa ccgcttcggc ggtaggcggt aaagcgttcg cgcgcgtcgg cgagatcttc
     3481 caagctgttg ccgacgattt ccaaaacgcg cgcgggcaag accggagcgg tgttccaaaa
     3541 accgtcggac aggttcaaaa cagtcatgcc ttcgggaatt cggggcggat tgccgccgca
     3601 agcaagcagg acggatgttt cagacggcat ggcttcttcc atttcccaaa tttcgtgcgg
     3661 aataaaactc tcggcctcgt attgccaaag cattttgtcc aattcctgaa gctgcccgaa
     3721 cgaatcggac cacaccagta tcctgccgcc gtcccgaatc gcacgggcaa tcaggcggca
     3781 ggtgaaaatc ggaacttggg caacgtgcgt gtaaaaggtg gctttcggca tattgtttga
     3841 gcatttggca ggacgatgcc gtctgaaagg cttcagacgg cattgtggca aaattaaaga
     3901 ttccgcagat agttcagcag caagggaacg ggacggccag tcgcaccttt ttccgctccg
     3961 gatttccacg ccgtacccgc gatgtcaagg tgcgcccacg ggtagccttc ggtgaagtaa
     4021 gacaggaatg ttgcggcggt aatcgtgccc gcgccgggcg tgccgatgtt tggaatgtcg
     4081 gcaaagttgg atttgagttg gtctttgtag gtctcaaaga gcggcagttg ccatgctttg
     4141 tcgtccacgt tgtaggaagc ggcaagcagg ctgtcgatca aatcctgatt gttgcccatc
     4201 acgccgctga catcgtgccc caaggcaaca atacacgcgc cggtcagggt ggcgacgtcg
     4261 atgacggctt tgggtttgaa ctgctcggcg taagtgagcg cgtcgcacaa aatcagacgg
     4321 ccttcggcat cggtgttcaa cacttcgatg gtcagacctt tcatactttt cacgacatcg
     4381 cccggtttgt ttgccgcgcc ggaaggcata ttttcacaag tggcgacgac ggcaatcagg
     4441 ttaatcggca gttgcagttt gacggcggcg cagaaggtgc tgatgacggt tgccgcgccg
     4501 cacatatcaa acttcatttc gtccatgttc aggccgggct tgagggagat gccgccggtg
     4561 tcgaaggtaa tgcctttgcc gaccaatacc acaggcgcgg cttctttgtc ggctgcaccg
     4621 aaatagctca gttcgaccaa atagggggct tccgcgctgc ctttggcgac cgaccaaaac
     4681 gaacccatgt tttctttgat gtagtctttt tcgatgattt tggcgtgcgc gcccagtttt
     4741 tcggcttcgg ctttggcggt gcgcgctaaa aattcgggcg tgcattcgtt gggcgcggcg
     4801 ttgcccaagt cgcggcagag gctttgtccg taaacttgcg cttcggcgac gcgcaaggct
     4861 tctttaacga cggcttcgtg tgcgctgtgg aacacggcgg tttcaaattt ggcgggcttg
     4921 gcttcttttt tgtagcggtc gaaacggtag gcggcgttgc cgaacgcaat cgcaaacgct
     4981 tcggctacgg cggcggcttg cgcttcatcg aaggcatgga tgtccacatt gaccgtttcc
     5041 tgattttgcg cccatttggc ggcttcggcg gcggccttgt tcaatgcggc gcggccggtg
     5101 cttttcagac agcatacggc aacagcctgc aaaccgttgc ctgtcgggat ttttgtgtcg
     5161 gcaaaatttt gaccttcttc aagcgaagac aaaagggcaa gggcggtcgg atggtttaat
     5221 tgcgcctctt cggtgcagac aaataactgt gcgcctgcct gctgttcctg caagatttcg
     5281 gtttttgtgc taaattccac gtttattctc ctgattgaga cggttgtcgg tagttttcgg
     5341 acggcctttc gctcaaaaga ccgtctgaag acggctggca cgattgtacc ccatttgaag
     5401 caccgtctga aaccttgcgc ggacaatccg cctgcgccga accgcttacc gccccctgac
     5461 cgcgattcta tgatttatca aagaaacctc atcaaagaac tctcttttac cgccgtcggc
     5521 attttcgtcg tcctcttggc ggtattggtc tccacgcagg caatcaacct gctcggccgt
     5581 gccgccgacg ggcgtgtcgc catcgatgcc gtgttggcat tggtcggctt ctgggtcatc
     5641 ggtatgacgc cgcttttgct ggtgttgacc gcatttatca gtacgttgac cgtgttgacc
     5701 cgctactggc gcgacagcga aatgtcggtc tggctatcct gcggattggc attgaaacaa
     5761 tggatacgcc cggtgatgca gtttgccgtg ccgtttgccg ttttggttgc cgtcatgcag
     5821 ctttgggtga taccgtgggc agagctacgc agccgcgaat acgctgaaat cctgaagcag
     5881 aagcaggaat tgtctttggt ggaggcaggc gggttcaaca gtttgggcaa gcgcaacggc
     5941 agggtttatt ttgtcgaaac cttcgatacc gaatccggca tcatgaaaaa cctgttcctg
     6001 cgcgaacagg acaaaaacgg cggcgacaac atcatcttcg ccaaagaagg taacttctcg
     6061 ctgaacgaca acaaacgcac gctcgaattg cgccacggct accgttacag cggcacgccc
     6121 ggacgcgccg actacaatca ggtttccttc caaaaactca acctgattat cagcaccacg
     6181 ccaaaactca tcgaccccgt ttcccaccgc cgtaccattc cgaccgccca actgattggc
     6241 agcagcaacc cgcaacatca ggcggaattg atgtggcgca tctcgctgac cgtcagcgtc
     6301 ctcctactct gcctgcttgc cgtgccgctt tcctatttca acccgcgcag cggacatacc
     6361 tacaatatct tgattgccat cggtttgttt ttaatttacc aaaacgggct gaccctgctt
     6421 tttgaagccg tggaagacgg caaaatccat ttttggctcg gactgctgcc tatgcacatc
     6481 atcatgttcg tcatcgcaat cgtacttctg cgcgtccgca gcatgcccag ccagcccttc
     6541 tggcaggcgg ttggcaaaag tctgacattg aaaggcggaa aatgaacctg atttcacgtt
     6601 acatcatccg tcaaatggcg gttatggcgg tttacgcgct ccttgccttc ctcgctttgt
     6661 acagcttttt tgaaatcctg tacgaaaccg gcaacctcgg caaaggcagt tacggcatat
     6721 gggaaatgct gggctacacc gccctcaaaa tgcccgcccg cgcctacgaa ctgattcccc
     6781 tcgccgtcct tatcggcgga ctggtctccc tcagccagct tgccgccggc agcgaactga
     6841 ccgtcatcaa agccagcggc atgagcacca aaaagctgct gttgattctg tcgcagttcg
     6901 gttttatttt tgctattgcc accgtcgcgc tcggcgaatg ggttgcgccc acactgagcc
     6961 aaaaagccga aaacatcaaa gccgccgcca tcaacggcaa aatcagcacc ggcaataccg
     7021 gcctttggct gaaagaaaaa aacagcatta tcaatgtgcg cgaaatgttg cccgaccata
     7081 cgcttttggg catcaaaatt tgggcgcgca acgataaaaa cgaattggca gaggcagtgg
     7141 aagccgattc cgccgttttg aacagcgacg gcagttggca gttgaaaaac atccgccgca
     7201 gcacgcttgg cgaagacaaa gtcgaggtct ctattgcggc tgaagaaaac tggccgattt
     7261 ccgtcaaacg caacctgatg gacgtattgc tcgtcaaacc cgaccaaatg tccgtcggcg
     7321 aactgaccac ctacatccgc cacctccaaa acaacagcca aaacacccga atctacgcca
     7381 tcgcatggtg gcgcaaattg gtttaccccg ccgcagcctg ggtgatggcg ctcgtcgcct
     7441 ttgcctttac cccgcaaacc acccgccacg gcaatatggg cttaaaactc ttcggcggca
     7501 tctgtctcgg attgctgttc caccttgccg gacggctctt cgggtttacc agccaactct
     7561 acggcatccc gcccttcctc gccggcgcac tacctaccat agccttcgcc ttgctcgccg
     7621 tttggctgat acgcaaacag gaaaaacgtt gaaccaatgc cgtctgcccc ccttcggacg
     7681 gcattggttt gtattatcat attcccgtag acagatagcc gttccctatt atagtggatt
     7741 aacaaaaacc agtacggcgt tgcctcgcct tgccgtacta ttgtactgtc tgcggcttcg
     7801 tcgccttgtc ctgatttaaa atacattacc tgtcataaca gttccatttt tgttaaaact
     7861 agtctatgat agcggtacaa atattgttta caatatttaa cgcaaatcat ttgcaacccg
     7921 acaaaagaaa aacagaaaaa ggaacaaaga gatgttagaa gcctatcgta aagccgccgc
     7981 cgagcgcgcc gcccttggta ttcccgccct tcctctgact gctcagcaaa ccgccgattt
     8041 ggttgagctg ctgaaaagcc cgcccgcagg cgaaggcgag ttcttggtcg aactgcttgc
     8101 ccaccgtgtt ccgcccggtg tggacgatgc cgccaaagtc aaagcctcat tcctggctgc
     8161 cgttgccgaa ggcagcgcgt ccagcccgct gatctccccc gaatatgcga ccgaactctt
     8221 aggtacgatg ctcggcggtt acaatatcca cgccttaatc gaactcttgg acgacgacaa
     8281 actcgcgccc attgccgcca aaggcttgaa acatacgctt ctgatgttcg attccttcca
     8341 cgacgttcag gaaaaagccg aaaaaggcaa caaatacgcg caagaagttt tgcaatcttg
     8401 ggcagatgcc gaatggttcg cctcacgcgc caaagttccc gaaaaaatca ccgttaccgt
     8461 tttcaaagtt gacggcgaaa ccaatacaga cgacctctcc cccgcgcccg acgcgtggag
     8521 tcgtcccgat attccgctgc acgcgctggc catgctgaaa aacccgcgcg acggcatcac
     8581 gcccgacaaa ccgggcgaag tcggtccgat taaattgttg gaagaactca aagccaaagg
     8641 ccatccggtt gcttacgtcg gcgacgtggt cggtactggt tcttcacgca aatccgcgac
     8701 caactccgtc atttggcata ccggcgaaga cattccgttc gtgccgaaca aacgcttcgg
     8761 cggcgtatgt ttgggcggca aaatcgcgcc gattttcttc aatacccaag aagattccgg
     8821 cgcgctgccg attgaagtcg atgtatctgc tctaaaaatg ggcgatgtcg tcgatatcct
     8881 gccttatgaa ggcaaaatcg tgaaaaacgg cgagactgtt gccgagtttg aattgaaatc
     8941 acaagtattg ctggacgaag tgcaagccgg cggccgtatc aacctgatta tcggtcgagg
     9001 tctgaccgcc aaagcgcgcg aagccctgaa actgcctgcc tctactgcat tccgcctgcc
     9061 gcaagcgcct gccgaaagca aagccggttt caccttggcg caaaaaatgg tcggccgcgc
     9121 ctgcggtctg cccgaaggac aaggcgtgcg cccgggtact tactgcgaac cgcgtatgac
     9181 gacggtcggc tcgcaagaca cgaccggccc gatgacccgc gacgagttga aagacttggc
     9241 ttgtttgggc ttctccgccg atatggtgat gcagtctttc tgccacaccg ccgcctatcc
     9301 gaaacctgtc gatgtaaaaa cccataaaga actgcccgcc tttatttcca cccgtggcgg
     9361 cgtgtcactg cgtccgggcg acggcgtcat ccactcgtgg ctcaaccgcc tgctgctgcc
     9421 cgataccgtc ggcaccggcg gcgacagcca tacccgtttc cccatcggta tttccttccc
     9481 cgccggctcc ggcttggttg cctttgccgc cgcaacgggc gtaatgccgc tcgatatgcc
     9541 cgagtctgta ttggtacgct tcagcggcaa gctgcaaccg ggcgtaaccc tgcgcgattt
     9601 ggtgaacgcc atcccgctgt acgcaatcaa acaaggtttg ctgaccgttg ccaaagccgg
     9661 taagaaaaac atcttctccg gccgcatcct cgaaatcgaa ggcctgcctg atttgaaagt
     9721 ggaacaagcc tttgaattga ccgacgcatc cgccgaacgc tccgccgccg gctgtaccgt
     9781 gaagctcaac aaagagccga ttatcgagta catgaaatcc aacgtcgtgt tgatgaaaaa
     9841 catgattgcc aacggctatc aagacccgcg cactttggaa cgccgcatca aagctatgga
     9901 aaaatggctg gcaaatcccg agttgctcga agcggataaa gatgccgaat acgccgccgt
     9961 gattgaaatc aacatggacg acatcaaaga gccgattatc gcctgcccga acgacccgga
    10021 cgacgtgtgc ttcatgtccg aacgctccgg caccaaaatc gacgaagtat tcatcggttc
    10081 gtgtatgacc aacatcggcc acttccgcgc cgcctccaaa cttttggaag gcaaggcaga
    10141 cacccccgtc cgcctgtgga ttgcgccgcc gaccaaaatg gacgcgaaac aattgtccga
    10201 cgaaggacac tacggcgtac tcggacgtgc cggcgcgcgt atggaaatgc cgggttgctc
    10261 cttatgtatg ggtaatcagg cgcaagtacg cgaaggtgcg accgttatgt ccacctccac
    10321 ccgcaacttc ccgaaccgtt tgggtaaaaa cacctttgtt tacctcggtt cggcggaatt
    10381 ggcagcgatt tgctccaaac tgggtaaaat cccgaccgtt gaagaatatc aagccaatat
    10441 cggcatcatc aacgaacagg gcgataaaat ctaccgctat atgaacttca acgaaatcga
    10501 cagctacaac gaagtagccg agaccgtgaa cgtttaatcc ccgtcatccg tatgaagtaa
    10561 gggattgacc gcaatgccgt ctgaacaacc ttcagacggc attgcaacat tccgctaacc
    10621 cttctttccg caaacgctgc aaatacggcg ttcacgcccc cacataaagg aaacgacagt
    10681 gaacctgaaa aaccgccatt ttctgaaact tttagacttc acgccggaag aaatcaccgc
    10741 ctacctcgac cttgccgccg aattgaaagc cgccaaaaaa gcagggcgcg agattcagcg
    10801 gatgaaaggg aaaaacatcg ccctgatttt tgaaaaaacc tctactcgga cgcgctgcgc
    10861 gtttgaagtc gccgcgcgcg atcaaggcgc gggagtgact tatttagagc cgtccgccag
    10921 ccaaatcggg cataaggaaa gcatcaaaga caccgcccgc gtgttgggca ggatgtacga
    10981 tgccatcgaa tatcgcggtt tcggtcagga agttgttgaa gaattggcga aatacgcggg
    11041 cgtacccgtg ttcaacgggc tgaccaacga gttccatccc acacaaatgc ttgccgacgc
    11101 actgactatg cgcgaacaca gcggcaaacc tttgaaccaa accgcgtttg cctacgtcgg
    11161 cgacgcgcgt tacaacatgg gcaattccct gctgatttta ggggcaaaat tggggatgga
    11221 cgtgcgtatc ggcgcaccgc aaagcctgtg gccgtctgaa ggcattattg ccgccgcaca
    11281 cgccgccgcc aaagaaaccg gcgcaaaaat taccctgacc gaaaacgcgc atgaagccgt
    11341 gaagaatgtt gattttattc ataccgatgt gtgggtcagc atgggcgagc cgaaagaagt
    11401 ctggcaggaa cgcatcgatt tgctgaaaga ttaccgcgtt acgcccgaac tgatggcggc
    11461 atcgggcaat ccgcaagtca aattcatgca ctgcctgccc gccttccaca accgcgaaac
    11521 caaagtcggc gaatggattt acgaaacctt cgggctgaac ggtgtggaag ttacagaaga
    11581 agtattcgaa agccccgcca gcatcgtgtt cgatcaggcg gaaaaccgta tgcacacgat
    11641 taaagcggta atggtcgcgg ctttgggcga ctgacagaac tgtgcctgtt taaattcatc
    11701 cgcaacacag ataccgtctg aacacgatgt tcagacggta tcca
//
LOCUS       DAWITQ010000051        11716 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.051, whole genome shotgun sequence.
ACCESSION   DAWITQ010000051 DAWITQ010000000
VERSION     DAWITQ010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11716)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11716)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11716
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.051"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(125..517)
                     /gene="rpsI"
                     /locus_tag="WIX18_001050"
     CDS             complement(125..517)
                     /gene="rpsI"
                     /locus_tag="WIX18_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEZ5238175.1"
                     /translation="MNGKYYYGTGRRKSSVARVFLIKGTGQIIVNGRPVDEFFARETS
                     RMVVRQPLVLTENAESFDIKVNVVGGGETGQSGAIRHGITRALIDFDAALKPALSQAG
                     FVTRDAREVERKKPGLRKARRAKQFSKR"
     gene            complement(527..958)
                     /gene="rplM"
                     /locus_tag="WIX18_001051"
     CDS             complement(527..958)
                     /gene="rplM"
                     /locus_tag="WIX18_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007343693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEZ5238176.1"
                     /translation="MKTFSAKPHEVKREWFVIDAQDKVLGRVAAEVASRLRGKHKPEY
                     TPHVDTGDYIIVINADKLRVTGAKFEDKKYFRHSGFPGGIYERTFREMQEQFPGRALE
                     QAVKGMLPKGPLGYAMIKKLKVYAGAEHAHAAQQPKVLELK"
     gene            complement(1136..1315)
                     /gene="ssrS"
                     /locus_tag="WIX18_001052"
     ncRNA           complement(1136..1315)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="WIX18_001052"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(1321..1626)
                     /locus_tag="WIX18_001053"
     CDS             complement(1321..1626)
                     /locus_tag="WIX18_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HEZ5238177.1"
                     /translation="MNIEQVHIEVMHARLTVNTPAEEKDTLLQAVGMLNGKAEAIREG
                     GRVADSEKIVIMAALNVVHDLLKTSLNGGDLAIGDFARKIADMDNACQKALSRLAQE"
     gene            complement(1637..1966)
                     /locus_tag="WIX18_001054"
     CDS             complement(1637..1966)
                     /locus_tag="WIX18_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238178.1"
                     /translation="MKQNIEKLESSVYTLVQKFETLVSENRRLKETVAELKRAHERQK
                     LEHETAVDELSEALLVQVGKLKEDLQNKIDSLTEENTRYRSLLEQSREKISALAARLP
                     QWQETQQ"
     gene            complement(2021..3010)
                     /locus_tag="WIX18_001055"
     CDS             complement(2021..3010)
                     /locus_tag="WIX18_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEZ5238179.1"
                     /translation="MKITVIGAGSWGTALALHFSQHGNRVSLWTRNADQVRQMQEARE
                     NKRGLPGFSFPETLEVCADLADALKDSGLVLIVTSVAGLRSSAELLKQYGAGHLPVLA
                     ACKGFEQDTGLLTFQVLKEVLPDNKKIGVLSGPSFAQELAKQLPCAVVLASENQEWIE
                     ELVPQLNTTVMRLYGSTDVIGVAVGGAVKNVMAIATGLSDGLEYGLNARAALVTRGLA
                     EITRLASAMGAQPKTMMGLAGIGDLILTCTGALSRNRRVGLGLAEGKELHQVLVEIGH
                     VSEGVSTIEEVFNTACKYQIDMPITQTLLQLIRKEMTPQQVVERLMERSARFE"
     gene            complement(3133..5835)
                     /gene="ppc"
                     /locus_tag="WIX18_001056"
     CDS             complement(3133..5835)
                     /gene="ppc"
                     /locus_tag="WIX18_001056"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HEZ5238180.1"
                     /translation="MQLHILNNPKDAALAADAEFLKQSLFNLLHEEASPLVVETVKLL
                     STSDDSAALIEKVLPQLDEQQTHDLTLACGLFAQILNIAEDVHHERRRQIHEEAGRGG
                     AEGSLTETVRRLKAGKADGKSVQRQLDNTSVTAVLTAHPTEVQRQTVLSFNRRIRALL
                     PQRERCTNADALARLRREIDTILLGLWQTSETRRHKLSVNDEINNGVSIFPMSFFEAL
                     PKLYRNMEHDFQMVYPDVCVPNILKIGGWIGGDRDGNPFVSAETLRFAFRRHADAVFR
                     FYRGELDKLYRELPLSIRRVKVNDDVMALAALSPDEELARTEEPYRRAIAYIMARAMG
                     KARALGLGMGCKFGFLEPYASAQEFLDDLKKLQRSLIDNGSRLLAEGRLADLIRSVSV
                     FGFHMMPLDLRQHAGKHADVVAELFQHAGLEDYNSLNEEQKQAALLRELSHQRPLYSP
                     FITYSDHTRHELAIFNEARKIKDEFGEDAVTQSIISNCEQPSDLLALALLLKESGLLV
                     VENGKPRSRINIVPLFETIEALENACPVMETMFRLDWYDALLESRGNIQEIMLGYSDS
                     NKDGGYVTSSWCLYQAELGLVELFKKYDVRMRLFHGRGGSVGRGGGPSYQAILAQPAG
                     SVAGQIRITEQGEVITAKYADPGNAQRNLETLVAATLEASILPDKKDPDAKLMQALSD
                     VSFKYYRELITHPDFIDYFLQTSPIQEIATLNLGSRPASRKTLARIQDLRAIPWVFSW
                     MQNRLMLPAWYGFGSAVETLCEDKPETLAALREHAQSNPFFQAMLSNMEQVMAKTDIT
                     LAENYAGLSESPEKAAVIFGMIKEEYQRSRKALLDLLQTEELLRDNRSLARSLALRIP
                     YLNALNGLQVAMLKRLRKEPDNPHALLMVHLTINGVAQGLRNTG"
     gene            5878..6771
                     /locus_tag="WIX18_001057"
     CDS             5878..6771
                     /locus_tag="WIX18_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HesA/MoeB/ThiF family protein"
                     /protein_id="HEZ5238181.1"
                     /translation="MPHPCQTVHTLTARVPKCRLKLNAARRQRYNRPQLFFPNIIMTT
                     TEHDNDDAFLLRYSRHILLDEIGIEGQQKLSAAHILVVGCGGLGAAALPYLAASGIGT
                     LTIADSDTVELHNLQRQVAFDEGDVGKPKAEALADRLKRINHNVDVRTVNEKLDGCRL
                     TGLVQTADIVLDCCDNYATRQAVNRVCVQTKTPLVSGAAVRFEGQLAVYRPDLPDSPC
                     YACLFDGGSASDGICSLFGVFSPLVGIIGSTQAAEALKILLDAGEPSHGRLAVYRALE
                     GGWQYFDLPRNPECPICGAER"
     gene            complement(7171..7395)
                     /locus_tag="WIX18_001058"
     CDS             complement(7171..7395)
                     /locus_tag="WIX18_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein SlyX"
                     /protein_id="HEZ5238182.1"
                     /translation="MDAVQELERRIVELEIQSALQEDVIAGLNAMVAELRQTLDLQQA
                     QLRLLYQKMQDRNPDAQEPYSLRDEIPPHY"
     gene            complement(7396..8784)
                     /locus_tag="WIX18_001059"
     CDS             complement(7396..8784)
                     /locus_tag="WIX18_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HEZ5238183.1"
                     /translation="MNAVVVAVIVMLVLSLSRVHVVLSLTVGAFVGGAVAGMPLQNIA
                     DAAGQVSQAGIIPVFNKGLEGGAKIALSYAMLGAFAMAITHSGLPQQLAGAVVRKLNR
                     GGMPDSVRSGEGAVKWLLLSIILVMGIMSQNIIPIHIAFIPMIVPPLLLVFNRLKIDR
                     RLIACVITFGLVTTYMFLPYGFGAIFLNEILLGNIHSAAPQLDVKNINVMAAMAIPAL
                     GMLAGLLLVFVHYRKPRLYQSNNADTAGNADAANRPQPSAYRSLAAAAAIAVCFAIQL
                     MYEDSLVLGAMLGFAVFMMLGVINRDKANDVFGEGIKMMAMVGFIMIAAQGFAAVMNA
                     TGHIQPLVESSMAIFGNSKGMAALAMLVVGLLVTMGIGSSFSTLPIIAAIYVPLCVGL
                     GFSPLATVAIVGTAGALGDAGSPASDSTLGPTMGLNADGQHDHIRDSVIPTFIHYNIP
                     LLIAGWIAAMVL"
     gene            complement(8870..9691)
                     /gene="prmC"
                     /locus_tag="WIX18_001060"
     CDS             complement(8870..9691)
                     /gene="prmC"
                     /locus_tag="WIX18_001060"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEZ5238184.1"
                     /translation="MTFDEWLGLSKLPKIEARMLLQYVSEYTRVQLLTRGGEEMPDEV
                     RQRADRLAQRRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLARLPEN
                     GRVWDLGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGARVEFAHGSWF
                     DTDMPSEGKWDIIVSNPPYIENGDKHLLQGDLRFEPQIALTDFSDGLSCIRTLAQGAP
                     DRLAEGGFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTLGKYMKHLK"
     gene            complement(9681..10142)
                     /locus_tag="WIX18_001061"
     CDS             complement(9681..10142)
                     /locus_tag="WIX18_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238185.1"
                     /translation="MQEQNRKSSFPIVMLLVSVALWIASLSNVAFYLGNHGSMEGLTV
                     LILGSIFASLDIRYCAVYANYVWLAAIVLLALRKKVVPVHAALWGLALVAFSVKAVYV
                     DEAGNTSDIVRYGAGFYLWYAAFAVATIGTFAGKNKERKAASAADGIKNDV"
     gene            complement(10207..11691)
                     /gene="tldD"
                     /locus_tag="WIX18_001062"
     CDS             complement(10207..11691)
                     /gene="tldD"
                     /locus_tag="WIX18_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HEZ5238186.1"
                     /translation="MPYNQAPDFLCADTMHPTYSAVQARLLEANRLSPELLAKSLCII
                     GAHHVDYADIYCQRTAYESWHLEEGIVKSGSFQIDQGVGVRAVSGDKTAFAYADSLCI
                     DSINRSARAVRAIGAAGGKVSAKMPSETRGKPVCSASDPIAGLDSAAKVALLNKVEAI
                     AKAADPRIVQVMAGLTCEYDMVYLARLDGKHAADIRPMVRLNVTVIAKQGERREQGSA
                     GGGGRYDLAYFDENLVRQFVDAAVKQALTNLESRPAPAGEMTVVLGNGWPGVLLHEAV
                     GHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGDIAGRRGSLNIDDEGNETRRTVL
                     IEDGILVGYMQDETNARLTGTQSTGNGRRESYASAPMPRMTNTFMENGGYEPDEIIAS
                     IDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGRLQYPVKGATIIGNGPEVLKHVS
                     MIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGSAI"
BASE COUNT         2450 a         3229 c         3287 g         2750 t
ORIGIN      
        1 gaatttaggg gattttgggg aattttgcaa aggtctcaat ctgtaatctt tagattgcca
       61 atgggaaacc gtctactaca aataaaaaac cctgcgataa gcagggtttt ttgaatttcc
      121 aacattaacg tttggagaat tgttttgcac ggcgtgcttt gcgcagaccc ggttttttac
      181 gttcgacttc gcgggcatcg cgggtaacaa aaccagcttg agacaaggcg ggtttcaacg
      241 cggcatcgaa gtcgatcagg gcacgggtaa tgccgtggcg gattgcgccg gactggccgg
      301 tttcgccgcc gccaacaaca ttgactttga tgtcgaaaga ttcggcgttt tcagtcagaa
      361 ccaagggttg gcgaacaacc attcggctgg tttcgcgtgc gaagaattcg tcaacgggac
      421 ggccgtttac gatgatttga cctgtacctt taatcaggaa tacacgagcc actgaacttt
      481 tgcggcggcc tgtgccgtag tagtatttac cgttcatgtc gcgtccttat ttcagttcca
      541 aaactttggg ttgttgcgca gcatgggcgt gttccgcacc cgcatacact ttcagttttt
      601 taatcatggc gtaacccaaa ggacctttgg gcagcatacc ttttacagct tgttccaaag
      661 cgcggcccgg gaattgctct tgcatttcgc ggaaagtgcg ttcgtagata ccgcctggaa
      721 aaccggaatg gcggaagtat tttttatctt cgaatttggc accggttaca cgcagtttgt
      781 ccgcattgat aacaatgatg taatcgccgg tatcgacgtg gggggtgtat tcaggtttgt
      841 gtttgccacg cagacggctg gcgacttcgg ccgcaacgcg acccaagact ttgtcttggg
      901 catcgatgac gaaccattcg cgcttcacct cgtggggttt cgctgaaaag gttttcatag
      961 tggaaatcca aatagatata gaaagttgta aattttaaag acaggattcg attttgtcaa
     1021 tcgcattacc gcgttacgga aggattttcc ggatttcggc agactgcata ctgctttttc
     1081 gggcggggcg gcggccaatg tgaaaaaccg catcgttgcg atgcggtttt gaatgggaat
     1141 ccccgcgaga gccgtttcgg ccgaatccgc ttgaaccttg ctgacaaggc ggctgcctcg
     1201 ggtagtttcg ggtgcgtccg caaaaggacg ctcgcgccca ctactgctcc cggcaacctt
     1261 aagcgaactt attggttcaa aggaatatat gccttcgcgg acaccgcagg gaaaaagggg
     1321 ttattcctgc gccaagcggg atagtgcttt ttggcaggcg ttgtccatat cggctatttt
     1381 acgcgcaaaa tcgccgattg ccaaatcgcc gccgttcagg gaggttttca acaggtcgtg
     1441 gacgacgttg agcgcggcca taatgacgat tttttcgctg tccgcgacgc gtccgccttc
     1501 gcggatggct tcggctttgc cgttgagcat tccgactgcc tgcaacagtg tgtctttttc
     1561 ttctgccggc gtgttgacgg tcagccgggc gtgcatgact tcgatgtgga cttgttcgat
     1621 gttcatcctt taatccttat tgctgcgttt cctgccattg ggggaggcgc gctgccagtg
     1681 cgctgatttt ttccctgctc tgttcgagca ggctgcggta tcgtgtattt tcttctgtca
     1741 ggctgtcaat tttgttttgc aggtcttctt tgagtttgcc gacttggacg agcagggctt
     1801 cgctgagttc gtcgacggcg gtttcgtgtt cgagtttttg ccgctcgtgc gcccgtttga
     1861 gttcggcgac ggtttctttg aggcggcggt tttcgctgac gagggtttcg aatttttgta
     1921 ccagcgtata aacgctgctt tcgagttttt cgatattttg tttcataacc ttacctgtcc
     1981 gtatgccgtc tgaaggcctc agacggcatc tgtctgttgt ttattcgaaa cgcgcgctgc
     2041 gttccatcag tctttcgacg acctgctgag gggtcatttc cttacggatg agttgcagca
     2101 gggtttgggt aatcggcata tcgatttggt acttacaggc agtattgaag acttcttcta
     2161 tcgtgctgac cccttcggaa acgtgtccga tttcgaccag cacctgatgc agttccttgc
     2221 cttctgccaa acccaagccg acgcggcggt tgcgtgagag tgcgccagtg caggtcaaga
     2281 tgaggtcgcc gatgcctgcc agccccatca tggttttggg ctgtgcgccc attgcggagg
     2341 caaggcgggt aatttcagct aatccgcgcg taaccagtgc ggcacgggcg ttaagcccgt
     2401 actctaggcc atcggacaat ccggtggcaa tcgccataac attttttacc gcgccgccaa
     2461 ccgccacgcc gataacgtcg gtactgccgt aaagcctcat gacagtcgtg ttgagctgcg
     2521 gtacgagttc ttcaatccac tcttggtttt cggaagcgag gacgacggca cagggcagtt
     2581 gtttggcgag ttcctgtgca aaactcggac cggagagtac gccgattttc ttattgtcgg
     2641 gcaatacttc tttcaatact tgaaaggtca gcagccctgt atcctgctcg aatcctttgc
     2701 aggcggcgag gacggggagg tgtcccgcgc cgtactgttt gagcagctct gcgctgcttc
     2761 tcaatccggc aacggaggtt acgataagga caagtccgct gtctttgagc gcgtctgcca
     2821 aatccgcaca cacttccaag gtttcgggaa aggaaaagcc gggcagtccg cgtttgtttt
     2881 cacgcgcttc ctgcatttgg cggacttggt ctgcgttgcg cgtccacagg gatacgcggt
     2941 tgccgtgttg ggaaaagtgc agggcgagcg ccgtacccca cgaacctgcg ccgataacgg
     3001 taattttcat tggtcgtctt tcaacatatc actgccgttc actttaaaac aatcggtgtt
     3061 tctctgcaag tgcggtcagg gaaatgccgt ctgaaaggtg ttcagacggc attttgcccc
     3121 gatgcggcac aatcagcctg tattgcgcaa accttgcgcc acgccgttga tggtcaggtg
     3181 aaccatcagc agcgcgtgcg gattgtcggg ttctttacgc aggcgtttga gcatggcgac
     3241 ctgcaggccg ttgagcgcgt tcaggtaggg aatcctcaag gcaagcgaac gggcgaggct
     3301 gcggttgtcg cgtaaaagtt cttcggtttg cagcaggtcg agcagggctt tgcggctgcg
     3361 ttggtattct tccttaatca tgccgaagat gacggcggct ttttccggcg attcgctcaa
     3421 gccggcatag ttttccgcga gggtgatgtc ggttttcgcc atcacttgct ccatattgga
     3481 aagcatggct tggaagaacg ggttgctttg ggcgtgttcg cgcagggcgg cgagcgtttc
     3541 gggtttgtct tcgcacaagg tttccaccgc gctgccgaaa ccgtaccaag caggcagcat
     3601 gaggcggttt tgcatccagg aaaataccca cggaatcgcg cgcaagtctt gaatccgcgc
     3661 taaggtcttg cggctggcag gacggctgcc gaggttgagg gtggcgattt cctgaatcgg
     3721 gctggtttgc aggaagtagt cgatgaagtc ggggtgggta atcagttcgc ggtagtattt
     3781 gaacgatacg tccgacaatg cctgcatcag tttggcatca gggtcttttt tatccggcag
     3841 gatgctggct tccaaagtcg cggcaaccaa ggtttccaag ttgcgttggg cattgccggg
     3901 gtcggcgtat ttggcggtaa tgacttcgcc ttgttcggta atgcggattt gtcccgccac
     3961 gctgcccgcc ggttgggcga gaatggcttg gtaagacgga ccgccgccgc gtccgacgct
     4021 gccgccgcga ccgtggaaca ggcgcatgcg gacatcgtat tttttgaaga gttcgaccaa
     4081 gcccaattcc gcctgataca gacaccatga gctggtaaca tagccgccgt ctttgttgga
     4141 gtcggagtag ccgagcatga tttcttggat gttgccgcga ctttcgagca gtgcgtcgta
     4201 ccagtcgagg cggaacatgg tttccatgac cggacaggcg ttttcgagtg cttcgatggt
     4261 ttcaaacagc ggcacgatat tgatgcggct gcgcggtttg ccgttttcca ccaccaacag
     4321 gccgctttct ttcagcagca atgccaaggc gagcaggtcg ctgggttgtt cgcagttgga
     4381 aataatgctt tgtgtaacgg catcttcgcc aaattcgtct ttgattttac gcgcttcgtt
     4441 gaaaattgcc agttcgtggc gggtatggtc gctgtatgtg ataaacgggc tgtacagcgg
     4501 acgttgatgg ctcaattcgc gcaacagggc agcttgtttt tgctcttcgt tcaggctgtt
     4561 gtagtcttcc aagcctgcgt gttggaaaag ctcggcaacc acatcggcgt gtttgcctgc
     4621 gtgttggcgc aggtcgagcg gcatcatgtg gaagccgaac acggatacgg agcggatgag
     4681 gtctgccaaa cggccttcgg caagcaggcg gctgccgttg tcgataaggg aacgttgcaa
     4741 ttttttcaaa tcatcgagaa attcttgtgc cgaagcatac ggctcgagaa agccgaattt
     4801 gcagcccatg cccaaaccga gcgcgcgcgc tttgcccata gcgcgcgcca tgatgtaagc
     4861 aatggcgcgg cggtagggtt cttccgtgcg ggcaagttct tcgtcaggcg agagggctgc
     4921 cagtgccatt acgtcgtcgt tgactttgac gcggcggatg gagagcggca gttcgcggta
     4981 aagtttgtcg agttcgccac ggtaaaaacg gaacacggca tcggcgtggc ggcggaaggc
     5041 aaaacgcaag gtttcggcag aaacgaacgg attgccgtcg cggtcgccac cgatccagcc
     5101 gccgattttg aggatgttcg gaacgcagac atcgggatag accatctgaa agtcgtgttc
     5161 catattgcgg tagagcttgg gcagggcttc gaaaaagctc atcgggaaga tggacacgcc
     5221 gttgttgatt tcgtcgttga cgctgagttt gtggcggcgc gtttcgctgg tctgccacaa
     5281 gcccagcagg atagtgtcga tttcgcggcg cagccgtgcc agcgcgtcgg cattggtgca
     5341 gcgttcgcgt tgcggcaaca gtgcgcggat gcggcggttg aagcttaaga cggtttggcg
     5401 ttgcacttcg gtcgggtgcg cggtcaaaac ggcggtaacg gacgtattgt ccaactgccg
     5461 ctgcaccgat ttgccgtcgg ctttccccgc tttgagcctg cggacggttt ccgtcaggct
     5521 gccttccgcg ccgccgcgtc cggcttcttc gtggatttgg cggcggcgtt cgtggtgcac
     5581 gtcttcggcg atattcaaaa tctgggcgaa caggccgcag gccaaggtta aatcgtgggt
     5641 ttgttgttcg tccaattgcg gcaatacttt ttcaatcaat gccgcgctgt cgtcggaagt
     5701 ggacaagagt ttgaccgttt cgacaaccaa tggcgaggct tcttcgtgca ggaggttgaa
     5761 cagggattgt ttcagaaatt ccgcgtccgc cgccaaagcc gcgtcctttg gattgttcag
     5821 aatatgcagt tgcatgattt ttctctcatt gccgtaaata ctgtaaatgt acctcaaatg
     5881 ccgcatccgt gccaaaccgt tcacacttta accgcccgtg tcccgaaatg ccgtctgaag
     5941 ttgaacgccg cccgacggca gcgttacaat cgcccacaac tgttttttcc gaacatcatc
     6001 atgaccacga ccgaacacga caacgacgat gcattcctgc tgcggtacag ccgccacatc
     6061 ctcttggacg aaatcggcat cgaagggcag cagaaacttt ccgccgcgca tattttggtc
     6121 gtcggctgcg gcggtttggg tgccgccgcc ctgccctatc tcgccgcttc cggcatcggc
     6181 acgctgacca tagccgattc cgacacggtc gagctgcaca acctgcaacg ccaagtcgca
     6241 tttgacgagg gcgatgtcgg caagcccaaa gccgaagcct tggcagaccg cctgaaacgc
     6301 atcaaccata acgtcgatgt ccgcaccgtc aacgaaaaac tcgacggctg ccgcctgacc
     6361 ggtttggttc aaaccgccga catcgtttta gactgctgcg acaactacgc cacgcgccaa
     6421 gccgtcaacc gtgtctgcgt acaaacgaaa acaccgctgg tttcaggagc agcggtgcgc
     6481 tttgaagggc aacttgccgt gtaccgtccc gacttgcccg actcgccgtg ttacgcctgc
     6541 ctgtttgacg gcggatcggc ttcagacggc atctgttccc tcttcggcgt gttctcgccg
     6601 ctggtcggca tcatcggcag tacccaagcg gcggaggctc tgaaaatcct gctggatgcg
     6661 ggcgaaccgt cgcacggcag gctggcggtt taccgtgcct tggaaggggg ctggcaatat
     6721 ttcgacctgc cgcgcaaccc cgaatgcccg atttgcggcg cggaacggta aaaccctgcc
     6781 gccgtttcag acggtatcca aacggatgcg gcggaacggt tttaaaaatt taaaaattta
     6841 catttctttg caaaaaaaaa taaacttacc ttataattgc agttgtttta gcaatgtctg
     6901 tttcgcagac tcattgagta agacgttttc cccgtaatgt gtttggccgt ctgtcccctt
     6961 tgggttcgga cggctttttt ttggctgtgt atgaataccc ggttggtttt atctgtttac
     7021 aggggaaaac cgcttatttc cgttcgggcg gaaaacggtt ccatcggata aaaggcattt
     7081 tgtccgactg attaaagtta catcttaggt ttgcatcggc aaaatattca aacacagcct
     7141 tttttaagga aatccggata cggcggcgca tcaataatgc ggcggaatct cgtcgcgcag
     7201 ggaatacggc tcttgcgcgt cgggattcct gtcctgcatt ttttgataca gcagcctcaa
     7261 ctgagcctgc tgcaaatcca gcgtctgccg caattccgcc accatcgcgt tcaggccggc
     7321 gattacgtcc tcctgaagcg cggattggat ttccagttcg acaatacggc gttccaactc
     7381 ttgaaccgcg tccatttaca gcaccatcgc ggcaatccag ccggcaatca gcagcgggat
     7441 gttgtagtgg atgaaggtcg ggataacgga atcgcggatg tggtcgtgct gcccgtcggc
     7501 gttcagcccc atcgtcgggc ccagcgtgga atcggacgca ggcgaaccgg catcgcccaa
     7561 cgcccccgcc gtgccgacaa tggcgacggt ggcaagcggc gaaaaaccca aaccgacaca
     7621 caaaggcaca taaatcgcgg caataatcgg caaagtggaa aaggacgaac cgatgcccat
     7681 cgttaccaaa agccccacca ccagcatcgc caacgccgcc atacctttgc tgttgccgaa
     7741 tatcgccata ctgctttcca ccagcggctg aatatgcccg gtcgcattca tcacggcggc
     7801 aaaaccctgc gcggcaatca taatgaagcc gaccatcgcc atcatcttga tgccttcgcc
     7861 gaatacgtcg tttgccttgt cgcggttgat gacgcccaac atcataaata cggcgaaacc
     7921 gagcatcgcg cccaacacca gcgagtcttc atacatcaac tggatggcaa agcatacggc
     7981 aatggcggcg gcggcggcca ggctacggta ggcggacggc tgcggacggt ttgccgcatc
     8041 ggcgttgccc gccgtatcgg cattgttgct ttggtacagg cgcggtttgc ggtaatggac
     8101 aaacaccagc aggagtccgg ccagcattcc caacgcggga atcgccattg ccgccattac
     8161 gttgatgttt ttcacatcaa gctgcggcgc ggcggaatgg atgttgccca acaggatttc
     8221 attcaaaaaa atcgcgccga agccgtaagg caggaacata taagtcgtaa ccagcccgaa
     8281 agtgatgacg cacgcaatca ggcggcggtc gattttcagg cggttgaaca ccaaaagcag
     8341 cggcggaaca atcatcggga taaaggcgat gtggatgggg atgatgttct gactcataat
     8401 gcccatcaca aggatgatgg aaagcagcag ccatttgacc gcgccctcgc ccgaacgcac
     8461 gctgtcgggc ataccgcccc ggttcagctt gcggacgacc gcgccggcaa gctgttgcgg
     8521 caggccggaa tgggtaatcg ccattgcaaa cgcgccgagc atcgcataag aaagcgcaat
     8581 cttcgcaccg ccttccaaac ctttgttgaa cacggggata atccccgcct gactgacctg
     8641 tcccgccgca tcggcaatgt tttgcagcgg catacccgcc accgcgccgc cgacaaacgc
     8701 gccgaccgtc aggctcaata ccacgtgcac gcgcgacagc gacagcacca gcataacgat
     8761 tacggcaact acgactgcat tcattgttta tcgctccaaa cctataaatg tttacatatc
     8821 gaaacacatc ataacccaat aatggaaaac ccgccaattt tgcaaacaat tatttcaaat
     8881 gcttcatata cttccccagc gtaaccctgt ccaaacccgc caagtccggc agggtttcca
     8941 ctcctgaaaa accattctcc gccaacacgc cgcgcaccgc cgcgccctga tcgaaaccgt
     9001 gttccaacaa caaaaaaccg ccttccgcca aacggtcggg cgcgccttgc gccaaggtgc
     9061 ggatgcagct taggccgtct gaaaagtcgg tcagcgcgat ttgcggctca aaccgcaaat
     9121 cgccttgcaa caaatgttta tcgccgtttt cgatataggg cgggttggac acgatgatgt
     9181 cccatttccc ttcagacggc atatcggtgt cgaaccacga accgtgtgca aattcgaccc
     9241 gcgcgcccaa atctgccgca tttttccgcg ccgtttcaag ggcgggcgtg ctgatgtcgg
     9301 atgcgcgcac aaacgcatcg gggcgttcga gtgcgacggt tacggcaacc gcgccgctgc
     9361 ccgtccccaa atcccacacg cgcccgtttt cgggcaggcg cgccaatacg gcttcgacca
     9421 agtgttcggt ttcggggcgc ggaatcagca cgctcggatt gactgtaaag cgtctgccat
     9481 aaaattcgcg cacacctaaa atataggcaa ccggctcgcc gttcagacgg cgttgcgcca
     9541 gcctgtccgc ccgctgtcgg acttcgtccg gcatttcttc cccgccccgc gtcaacaact
     9601 gcacgcgcgt atattccgaa acatattgca gcagcattct tgcttcaatt ttaggcagtt
     9661 ttgacaagcc caaccattcg tcaaacgtca ttttttatcc cgtctgccgc cgatgcggct
     9721 tttctttcct tattctttcc ggcaaacgta ccgatggtgg caaccgcaaa tgcggcatac
     9781 cacaaataaa atcctgcacc gtagcgcaca atatccgatg tattccctgc ttcatcgacg
     9841 tatacggctt tcacactgaa agccaccaac gccaagcccc aaagtgccgc atggacaggc
     9901 acgaccttct tccgcaacgc cagcaaaaca atggccgcca accaaacata attcgcatag
     9961 accgcacaat acctgatatc caaagaagca aatatcgacc ccaaaatcaa aacggtcaaa
    10021 ccctccatgc ttccatgatt gcccaaataa aatgcaacat tggataaaga cgctatccac
    10081 agggcaaccg acaccagcaa catcactatg ggaaaacttg atttccgatt ctgttcctgc
    10141 atggttttat cctaatgtaa aaggccgcct gaaaaccttt cagacggcat cgtgccggat
    10201 tccgcgtcag attgcgctgc cgccgacggt cagtccggca tcaatccgca aagtcggttg
    10261 ccccacgccg acggggacgc tctgcccttc tttgccgcac acgccgacac cgctgtcgag
    10321 cgcagtatcg ttgcctatca tggaaacgtg tttcagcact tcggggccgt tgccgataat
    10381 ggtcgcgcct ttgacggggt attgcagcct gccgccctcc acccaccacg cttcggacgc
    10441 gctgaacacg aatttgccgc tggtaatgtc cacctgtccg ccgccgaagt tgacggcgta
    10501 aatgcctttg tcgatggacg cgatgatttc gtcgggttcg tagccgccgt tttccataaa
    10561 ggtattggtc atgcgcggca taggggcgga agcgtaactt tcgcggcggc cgttgccggt
    10621 ggattgcgta cccgtcaggc gggcattggt ttcgtcctgc atatagccga ctaaaatgcc
    10681 gtcttcaatc aatacggtgc ggcgggtttc gttgccttcg tcgtcgatgt tgagcgaacc
    10741 gcgccggccg gcaatatcgc cctgatcgac gacggtaacg cctttggcgg cgacgcgctc
    10801 gcctattctg ccggaaaaga cgctggtccc cttgcggttg aaatcgcctt ccaaaccgtg
    10861 tccgaccgct tcgtgcagca acacgcccgg ccagccgttg cccaaaacga cggtcatttc
    10921 gccggcgggc gcggggcggg attcgaggtt ggtgagtgcc tgtttgacgg cggcatcgac
    10981 aaactgccgc accaagtttt catcgaaata agccaagtcg tagcgtccgc cgccgcccgc
    11041 gctgccctgt tcgcggcgtt cgccctgttt ggcgatgacg gtaacgttca ggcgcaccat
    11101 cgggcggatg tcggcggcgt gtttgccgtc cagacgggcg aggtaaacca tatcgtattc
    11161 gcaggtcaaa ccggccatca cttgcacgat gcgcggatcg gcggctttgg cgattgcttc
    11221 cactttgttc aacagcgcga ctttggcggc ggaatcgagg ccggcaatgg ggtcggacgc
    11281 ggaacaaacc ggcttgccgc gcgtttcaga cggcattttg gcggacacct tgccgcctgc
    11341 cgccccaatc gcgcggacgg cgcgggcgga acggtttatc gaatcgatgc acaggctgtc
    11401 ggcgtaggca aaggcggttt tgtcgcccga aacggcgcgc acgcccacgc cctgatcgat
    11461 ttggaagctg cccgatttga cgatgccctc ttccaaatgc cagctttcat aggcggtgcg
    11521 ctggcagtag atgtcggcgt aatcgacgtg gtgcgcgccg atgatgcaca ggcttttggc
    11581 gagcagttcg ggggaaaggc ggttggcttc gagcagccgc gcctgtacgg cggaataggt
    11641 cggatgcata gtgtcggcgc ataaaaaatc aggggcttga ttatacggca tttgttatat
    11701 agtggattaa caaaaa
//
LOCUS       DAWITQ010000052        11255 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.052, whole genome shotgun sequence.
ACCESSION   DAWITQ010000052 DAWITQ010000000
VERSION     DAWITQ010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11255)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11255)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11255
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.052"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            38..461
                     /locus_tag="WIX18_001063"
                     /pseudo
     CDS             38..461
                     /locus_tag="WIX18_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221878.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            567..1130
                     /gene="pgsA"
                     /locus_tag="WIX18_001064"
     CDS             567..1130
                     /gene="pgsA"
                     /locus_tag="WIX18_001064"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEZ5238187.1"
                     /translation="MPWNLPIFLTWLRVLLIPVMTALFYLPFPWFAEETINLTAAVIF
                     AVAALTDWFDGFLARLWKQTSDFGAFLDPVADKLMVAVSLLLLVKLDRTYVLFAMIII
                     GREITISALREWMAQMGKRNSVAVATVGKFKTAAQMLAIFLLLLNIPDFYGFNLVVIG
                     NVLMFIASLLTVWSMLYYLKMAWKEIA"
     gene            1210..1285
                     /locus_tag="WIX18_001065"
     tRNA            1210..1285
                     /locus_tag="WIX18_001065"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1243..1245,aa:Gly,seq:gcc)
     gene            1311..1386
                     /locus_tag="WIX18_001066"
     tRNA            1311..1386
                     /locus_tag="WIX18_001066"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1344..1346,aa:Gly,seq:gcc)
     gene            1410..1485
                     /locus_tag="WIX18_001067"
     tRNA            1410..1485
                     /locus_tag="WIX18_001067"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1443..1445,aa:Gly,seq:gcc)
     gene            1507..1582
                     /locus_tag="WIX18_001068"
     tRNA            1507..1582
                     /locus_tag="WIX18_001068"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1540..1542,aa:Gly,seq:gcc)
     gene            1608..1681
                     /locus_tag="WIX18_001069"
     tRNA            1608..1681
                     /locus_tag="WIX18_001069"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1640..1642,aa:Cys,seq:gca)
     gene            1784..1873
                     /locus_tag="WIX18_001070"
     tRNA            1784..1873
                     /locus_tag="WIX18_001070"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1818..1820,aa:Leu,seq:taa)
     gene            1977..3029
                     /gene="sohB"
                     /locus_tag="WIX18_001071"
     CDS             1977..3029
                     /gene="sohB"
                     /locus_tag="WIX18_001071"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HEZ5238188.1"
                     /translation="MWKEILLNYGIFLLELLTVFGAIALIVLAIVQSKKQSESGSVVL
                     TDFSENYKKQRQSFEAFFLSGEEAKHQEKEEKKKEKAEAKAEKKRLKEGGEKSAETQK
                     SRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDEVLLRLESPGGVVHGYGLAASQL
                     RRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIVGSVGVVAEVPNIHRLLKK
                     HDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENRPQLDIEEV
                     ATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVKYQEKQSLIQRIGLQAEAS
                     VEKLFAKLVNRRADVM"
     gene            complement(3080..4050)
                     /locus_tag="WIX18_001072"
                     /pseudo
     CDS             complement(3080..4050)
                     /locus_tag="WIX18_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225028.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter six-transmembrane
                     domain-containing protein"
     gene            complement(4137..5006)
                     /locus_tag="WIX18_001073"
     CDS             complement(4137..5006)
                     /locus_tag="WIX18_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEZ5238189.1"
                     /translation="MSANEYTQIGWIGLGQMGLPMVTRLLDGGIEVGVYNRSPDKTAP
                     ISAKGAKVYGNTAELVRDYPVIFLMVSDYAAVCDILNGVRDGLAGKIIVNMSTISPTE
                     NLAVKALVEAAGGQFAEAPVSGSVGPATNGTLLILFGGSEAVLNPLQKIFSLVGKKTF
                     HFGDVGKGSGAKLVLNSLLGIFGEAYSEAMLMARQFGIDTDTIVEAIGGSAMDSPMFQ
                     TKKSLWANREFPPAFALKHASKDLNLAVKELEQAGNTLPAVETVAASYRKAVEAGYGE
                     QDVSGVYLKLAEH"
     gene            complement(5101..6018)
                     /gene="hisB"
                     /locus_tag="WIX18_001074"
     CDS             complement(5101..6018)
                     /gene="hisB"
                     /locus_tag="WIX18_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HEZ5238190.1"
                     /translation="MNLTKTQRQLHNFLTLAQEAGSLSKLAKLCGYRTPVALYKLKQR
                     LEKQAEDPDARGIRPSLMAKLEKHTGKPKGWLDRKHRERTVPETAAESTGTAETQIAE
                     TASAAGCRSVTVNRNTCETQITVSINLDGSGKSRLDTGVPFLEHMIDQIARHGMIDID
                     ISCKGDLHIDDHHTAEDIGITLGQAIRQALGDKKGIRRYGHSYVPLDEALSRVVIDLS
                     GRPGLVYNIEFTRALIGRFDVDLFEEFFHGIVNHSMMTLHIDNLSGKNAHHQAETVFK
                     AFGRALRMAVEHDPRMAGQTPSTKGTLTA"
     gene            complement(6015..7112)
                     /locus_tag="WIX18_001075"
     CDS             complement(6015..7112)
                     /locus_tag="WIX18_001075"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HEZ5238191.1"
                     /translation="MKSVRSFIRDDIQAMSAYQIADVPPGFAKLDSMESPVHPFAGHE
                     TLLQEWQARLAAAPIHLYPNPSGSGLQEALRSAFDIPDCADIALGNGSDELIQFITML
                     TAKPGAAMLAAEPSFVMYRHNAALYGMDYVGVPLNGDFTLNLPAVLEAVRKHRPALTF
                     IAYPNNPTGVCFTRAEIEAVIEASDGIVVVDEAYGAFNGDSFLPQAGSIPNLIVMRTV
                     SKIGFAGLRIGYAAGCPEVIGELQKILPPYNMNQLSLTTAKLALQHYGIISANIDSLK
                     NERERMFAELGKICRLNTFPSQANFITIRVPDADLLFDTLKQNRILVKKLHGAHPLLE
                     HCLRITVGSPAQNDAVLNIIRQLYCQPTDFL"
     gene            complement(7158..8447)
                     /gene="hisD"
                     /locus_tag="WIX18_001076"
     CDS             complement(7158..8447)
                     /gene="hisD"
                     /locus_tag="WIX18_001076"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEZ5238192.1"
                     /translation="MKKLNTQSPDFQAGLKALLAFETAQNPETERIVADICADVQKRG
                     DAALIEYTNKFDQTNAKSIDDLILTQADLNAAFERIPNDVQTALQTAARRVESYHQRQ
                     KMESWSYTDEDGTLLGQQITPLDRVGIYVPGGKAAYPSSVIMNAMPAHVAGVKEIIMV
                     VPTPKGERNDIVLAAAYVAGVTKVFTVGGAQAVAALAYGTETIPQVDKITGPGNAFVA
                     AAKRRVFGVVGIDMVAGPSEILVIADGTTPADWVAMDLFSQAEHDEIAQAILIGTSQA
                     YLDEVEAAMDRLIETMPRRDIIEASLGNRGAMILAKDLDEACEIANYISPEHLELSVE
                     NPQEWAKKIRHAGAIFMGRYTGESLGDYCAGPNHVLPTSRTARFSSPLGTYDFQKRSS
                     LIQVSEQGAQKLGETASVLAHGESLTAHARAAEFRMK"
     gene            complement(8444..9343)
                     /locus_tag="WIX18_001077"
     CDS             complement(8444..9343)
                     /locus_tag="WIX18_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HEZ5238193.1"
                     /translation="MVAKIKKFSDSTLSVLNNGERRFYVYCLTDLKKDKILYIGKGCG
                     NRIFEHEWVASRSQDPVSGEIIDRKLKAISKCKKLGRYIISYHLTEVEALAAESALIH
                     FVKSVLGKKLKNKIAGHGPGGISVEELDRRFGFSSLPLNEINPDGLILAIKIHNAFDL
                     DTDEELDYLFDNQDDANLKSRTLGNWVIGKDVASKVKYVIGVHTGLQNAVVSAYEVDG
                     FETMVEETKNGRKQSRYRFRTTSRSEEVLAKLGLQQKCLPELKFGSGGEKAYIRPKTE
                     TETEQENIQTTPNPKIKKEKTKS"
     gene            complement(9447..10100)
                     /locus_tag="WIX18_001078"
     CDS             complement(9447..10100)
                     /locus_tag="WIX18_001078"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HEZ5238194.1"
                     /translation="MQDNALTIALSKGRIFEETLPLLAAAGIVPTEEPEKSRKLIIGT
                     NHENIRLVIVRATDVPTYVRYGAADFGIAGKDVLIEHGGTGLYRPLDLEIAKCRMMVA
                     VRKGFDYEAASQPGCRLKIATKYPEIAASHFAGKGVHVDIIKLYGSMELAPLVGLSDA
                     IVDLVSTGNTLKANGLEAVEHIVDISSRLVVNKAALKTKYALLEPIIQAFGGAVKAK"
     gene            complement(10179..10832)
                     /locus_tag="WIX18_001079"
     CDS             complement(10179..10832)
                     /locus_tag="WIX18_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEZ5238195.1"
                     /translation="MFSVPRSFLPGVFVLAALAACKPQDNSAAQAASSSASASAAENA
                     AKPQTRGTDMRKEDIGGDFTLTDGEGKPFSLSDLKGKVVILSFGFTHCPDVCPTELLT
                     YSDTLKQLGGQAKDVKVVFVSIDPERDTPEIIGKYAKQFNPDFIGLTATGDQNLPVIK
                     QQYRVVSAKVNQKDDSENYLVDHSSGAYLIDKNGEVAIFSPYGSEPETIAADVRTLL"
     gene            11109..11193
                     /locus_tag="WIX18_001080"
     tRNA            11109..11193
                     /locus_tag="WIX18_001080"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:11143..11145,aa:Leu,seq:caa)
BASE COUNT         2515 a         2675 c         3187 g         2878 t
ORIGIN      
        1 tcgctgggta tggtttgccg ccataagctg tctgctgttg tccgccgttt ttattgcacc
       61 ttacctgacg gcatttcacg aacaagaaaa aacattagaa tatgcggaat tgaccgttac
      121 cgcccccaac cgcagcggac gggcaatcaa actggatgca gacgggcagc attaccggct
      181 ttcctgctat gggttcgaca gtttgtgcac aggcggcaat atcggcagaa ccatcagggc
      241 ggagcaggtt agagccgttt taagcgaaac cgtcggcaaa ggttttttaa acggcgttct
      301 gttggaatac cgcaacagtg gcagtgtcta taagcaataa agattttgcc cgcacggaag
      361 accgccttgt cgaagtgttg gcacaacctg ccgttttcag cctgaaactg ggtattttgc
      421 ttttattgcc cgccattttc ctgcgtttga aaagaatgtg aaaacagatt ggcggggcgg
      481 gggaatgccc atgcagcaat tttacgtttt gggttatgag gataaccgtt ataatcacaa
      541 ctttacagtc tgcacagaga aaatcgatgc cttggaatct ccccatcttc ctcacatggt
      601 tgagggtctt gctcattcct gtcatgacag ccctttttta cctgcctttt ccgtggttcg
      661 cggaggaaac gattaatctc accgccgccg tcatttttgc cgttgccgcc ttaaccgact
      721 ggtttgacgg atttttggca agactgtgga aacagacttc cgatttcggc gccttcctcg
      781 atcccgtcgc cgacaagctg atggttgccg tatcgctact tttactggtc aaactcgacc
      841 ggacctatgt tttgtttgcc atgatcatta tcggcaggga aattaccatt tccgcattgc
      901 gcgaatggat ggcgcaaatg ggcaaaagga acagcgttgc cgtcgccacc gtcggtaagt
      961 tcaaaaccgc cgcgcaaatg ctggcaatct tcctgctgct gctgaatatt cccgattttt
     1021 acggatttaa tcttgttgtt atcggcaatg tattgatgtt tatcgcatct ttgctgacag
     1081 tctggtcgat gctgtattat ctgaaaatgg cgtggaaaga aatcgcctga aaaaaacata
     1141 aaaatagctt gacggcaaaa acagaatcca taataattgc gtctcttcga tgttggagaa
     1201 tgaaatcggg cgggaatagc tcagttggta gagcgcaacc ttgccaaggt tgaggtcgcg
     1261 agttcgagac tcgtttcccg ctccaaaaat ttcattttcc cacaatcatt gcgggaatag
     1321 ctcagttggt agagcgcaac cttgccaagg ttgaggtcgc gagttcgaga ctcgtttccc
     1381 gctccaagtt ttatttcaaa catatcaacg cgggaatagc tcagttggta gagcgcaacc
     1441 ttgccaaggt tgaggtcgcg agttcgagac tcgttttccg ctccaaaaac cgatatgttt
     1501 gaacgcgcgg gaatagctca gttggtagag cgcaaccttg ccaaggttga ggtcgcgagt
     1561 tcgagactcg tttcccgctc caagtttttt agataagcca gttttagggc gagatagcaa
     1621 agtggttatg cagcggattg caaatccgtc tacgccggtt cgattccgac tctcgcctcc
     1681 attatcgtac tatggcgggg tggcagagtg tttatgctat gaggagtgca atcttcatat
     1741 aggccggtta aaatccgcgc ccccgcctcc acctttcaca aatgcccggg tggtgaaata
     1801 ggtagacaca acggacttaa aatccgtcgg gactaaacat cccgtgccgg ttcgattccg
     1861 gctccgggca ccaagctgaa aatgacaatg ccgctccaag cggttatttt tttatctgtc
     1921 ggacggtgat ggacaatatt gacatgttca tgcctgaaca agaggaaatc caatcaatgt
     1981 ggaaagaaat tttactgaat tacggtattt tcctgctcga actgcttacc gtgttcggtg
     2041 caattgcgct gattgtgttg gctatcgtac agagtaagaa acagtcggaa agcggcagtg
     2101 tcgtactgac ggatttttcg gaaaattata aaaaacagcg gcaatcgttt gaagcattct
     2161 ttttaagcgg ggaagaggca aaacatcagg aaaaagagga aaagaaaaag gaaaaggcgg
     2221 aagccaaagc agagaaaaag cgtttgaagg agggtgggga gaaatctgcc gaaacgcaaa
     2281 aatcccgcct ttttgtgttg gattttgacg gcgatttgta tgcacacgcc gtagaatcct
     2341 tgcgtcatga gattacggcg gtgcttttga ttgccaagcc tgaagatgag gttctgctta
     2401 gattggaaag tccgggcggc gtggttcacg gttacggttt ggcggcttca cagcttaggc
     2461 gtttgcgcga acgcaatatt ccgctgaccg tcgccgtcga taaggtggcg gcgagcggcg
     2521 gttatatgat ggcgtgtgtg gcggataaaa ttgtttccgc tccgtttgcg attgtcggtt
     2581 cggtgggtgt ggtggcggaa gtaccgaata tccaccgcct gttgaaaaaa catgatattg
     2641 atgtggatgt gatgacggcg ggcgaattta agcgcacggt tacttttatg ggtgaaaata
     2701 cggaaaaggg caaacagaaa ttccgacagg aactggagga aacgcatcag ttgttcaagc
     2761 agtttgtcag cgagaaccgc cctcaattgg atattgagga agtggcaacg ggcgagcatt
     2821 ggttcggtcg gcaggcgttg gcgttgaact tgattgacga gatttcgacc agtgatgatt
     2881 tgttgttgaa agcgtttgaa aacaaacagg ttatcgaagt gaaatatcag gagaagcaaa
     2941 gcctgatcca gcgcattggt ttgcaggcgg aagcttctgt tgaaaagttg tttgccaaac
     3001 ttgtcaaccg gcgggcggat gtgatgtagt ttgccgaacg gatggaaatg ccgtctgaag
     3061 cgtgttcaga cggcattttt caagttccgg ctttgatgtt ccgttccgac cactctatcc
     3121 gttgtccgat gtctttcaaa ttggaatatt gttcgaccaa tcgcggcacg tcgtccaaac
     3181 tcatggcaaa catccacaga taagtgccga ccgaatagac atgccccgcg ctgctgtagc
     3241 ctttgagcgt catcatcaca aaagcaaagc cgaacaaaat acccatcgcc gtgccgacgc
     3301 agagatagcc gaaggcttcg cggttggaaa tcagcacacg caggcgcgca agcagtccgt
     3361 aatggcggta cagctgccgc cggtcgcctt ttcggataaa gtggttgtcg cgttccaagc
     3421 tgttcttcag gcggaaatac aggttttcgc tgatggccgc aaaacgtggc aaaagccata
     3481 aaaacaacgc aagtatgccc accgccgaca cgccgaccca aaattccagc accagcagca
     3541 tgatgcacgc gccgaatatg gatacgacgg atgtcgcggc aatcggcagg tgttcttcaa
     3601 aaaagctgac aaactcacgc gacagggcaa cccgcgcagt tatagtggat taacaaaaat
     3661 caggacaagg cgacgaagcc gcagacagta caaatagtac ggcaaggcga gacaacgccg
     3721 tactggttta aatttaatcc actatattgc cgaatgcggg acttaccgct gccgctgttc
     3781 caacacaacc ggcacggcga tttcggtata aatccgcgta aacgtgcgtg tatcggcaat
     3841 ccgccgcgcc gcaccgacca gccacattaa aagcacaacc aaagcgtaca gcaacgcctg
     3901 ccacacctcc cccgcaatca cggcattgat cgcccggccg ccaaacaccg gatacaccag
     3961 catcaaaagg ttttccagtc cgaccaggga aaatgtgcca atcaatcgct tgcggtgggt
     4021 ttgggctatg tgtttcaaca ttttccacat atttgttccc tattttttat ttagcgtggg
     4081 gtgataaaaa tgccgtctga aatatgttca gacggcattg tgtttggaaa aggcaatcag
     4141 tgttctgcca atttcaggta aacgccggaa acgtcctgtt cgccgtagcc ggcttcgact
     4201 gctttgcggt agctggcagc aacggtttcg acggcgggca gggtgttgcc tgcctgttca
     4261 agctctttga cggcgaggtt gaggtctttg gaggcgtgtt tgagggcgaa ggcgggtggg
     4321 aattcgcggt ttgcccacag ggattttttg gtttggaaca tgggcgagtc cattgccgag
     4381 ccgccgatgg cttcgacgat ggtgtcggta tcgatgccga actgccgcgc catcagcatc
     4441 gcttcgctgt acgcttcgcc gaaaatgccc aagagcgagt tcaagacgag tttcgcgccc
     4501 gaacctttgc cgacatcgcc gaaatggaag gtttttttgc cgacgaggga aaatattttt
     4561 tgcagcgggt ttaaaacggc ttcgctgccg ccgaacagaa tcagcagcgt gccgttggtg
     4621 gcgggcccga ccgatccgga aacgggtgct tcggcaaact gtccgcctgc ggcttcgaca
     4681 agtgctttga cggcgaggtt ttcggtcggg gagatggtgc tcatgttgac gatgattttg
     4741 ccggccaatc cgtcgcggac tccgttcagg atgtcgcaca cggcggcata gtcggaaacc
     4801 atcaggaaaa tgacgggata gtcgcggacg agttcggcgg tgttgccgta aacttttgcg
     4861 cctttggcgg agatgggggc agttttgtcg ggcgagcggt tgtatacgcc gacttcgatg
     4921 ccgccgtcca agagccgcgt taccataggc agacccattt gccctaagcc tatccagccg
     4981 atttgtgtgt attcgtttgc ggacatgatg tttactcctt ttctgtttgt agtgtagtgt
     5041 aatcttatct gttccgatac cgtctgaaaa gcctgcgggt gtttcagacg gtatggtttt
     5101 ttatgcggtc agcgtgcctt tggtcgaggg ggtctgtcct gccatgcgcg ggtcgtgttc
     5161 gactgccata cgcagggcgc gcccgaaggc tttgaatacg gtttccgcct gatggtgggc
     5221 gtttttgccg ctgaggttgt cgatgtgcag ggtcatcata ctgtggttga cgatgccgtg
     5281 gaaaaattct tcaaacaaat cgacatcgaa acgtccgatt agtgcgcggg taaattcgat
     5341 gttgtacacg agtccggggc ggccggaaag gtcgatgacg acgcggctga gggcttcgtc
     5401 gagcgggacg taggaatgtc cgtaacggcg gatgcctttt ttgtcgccga gtgcctgccg
     5461 gattgcttgt ccgagtgtga tgccgatgtc ttcggcggtg tggtggtcgt cgatgtgcag
     5521 gtcgcctttg cagctgatgt cgatgtcaat catgccgtgg cgggcgattt gatcgatcat
     5581 gtgttcgagg aagggtacgc cggtatccag cctgcttttg ccgctgccgt cgaggttgat
     5641 ggagacggtg atttgggttt cgcaggtatt gcggttgacg gtaacgctgc ggcagccggc
     5701 agcagatgcg gtttcggcaa tttgggtttc ggcagttccg gtgctttctg cggcggtttc
     5761 ggggacagtg cgttcgcggt gttttctgtc gagccagcct ttgggtttgc cggtgtgttt
     5821 ttcgagtttt gccatcaggc tgggacggat gccgcgtgca tctgggtctt ctgcctgctt
     5881 ttcaaggcgt tgtttgagtt tgtagagtgc gacgggggta cggtagccgc agagtttggc
     5941 gagcttggac agcgaacctg cttcttgggc gagggtcaga aagttgtgca gttggcgttg
     6001 tgttttagtc aaattcatag gaaatccgtt ggttggcagt aaagttggcg aatgatgttg
     6061 agaacggcat cgttttgtgc ggggctgcct acggtaatgc gcaggcagtg ttccaaaagc
     6121 gggtgcgcgc catgcagttt tttaaccaag atgcggtttt gtttgagcgt gtcaaacaac
     6181 aaatcggcat cgggtacgcg tatggtaatg aagtttgcct gacttggaaa ggtgttcaga
     6241 cggcatattt tgcccaattc ggcgaacatc cgttcgcgtt cgtttttcag gctgtcgatg
     6301 ttggcagaga tgatgccgta gtgttgcagg gcgagtttgg cggtggtcag gctcagttgg
     6361 ttcatattgt agggcggcag gattttttgc agttcgccga tgacttcggg acagcctgcc
     6421 gcatagccga tacgcagtcc ggcaaaaccg attttgctga cggtacgcat gacgatgagg
     6481 ttgggaatgc tgcccgcctg cggcaggaag ctgtcgccgt tgaatgcgcc gtaggcttcg
     6541 tcgacgacga cgatgccgtc tgaagcttcg atgacggctt cgatttcggc acgcgtgaaa
     6601 catacgccgg tggggttgtt ggggtaggcg ataaaggtca gggcagggcg gtgcttcctg
     6661 acggcttcga ggacggcggg caggttgagg gtgaaatctc cgttcagtgg aacgccgaca
     6721 taatccatgc cgtacagcgc ggcgttgtgg cggtacatga cgaaactggg ttcggctgcc
     6781 aacattgccg cgcccggttt ggcggtcagc atcgtgatga actgtatcag ctcgtccgag
     6841 ccgttgccca gcgcgatgtc ggcgcagtcg ggaatgtcga acgccgaacg taatgcttcc
     6901 tgtaaaccgc tgccggaggg attggggtaa agatggatgg gcgcggcggc aagccgtgcc
     6961 tgccattcct gcaacagcgt ttcatgtccg gcaaaagggt ggacgggact ttccatcgaa
     7021 tcgagtttgg caaagccggg cggaacgtcg gcaatctgat atgccgacat agcttgtatg
     7081 tcgtcgcgga tgaaggagcg gacggatttc atcgtgtttc cttaatggtt ggaatatgcc
     7141 tgtacgccgt ttcggcatta tttcatacgg aactctgccg cgcgggcgtg ggcggtcagg
     7201 ctttcgccgt gtgccagcac gctggcggtt tcgcctaatt tttgcgcgcc ctgttccgaa
     7261 acctgaatca ggctggagcg tttttggaaa tcatatgtcc ccaaaggcga ggaaaagcgg
     7321 gcggttcggc tggtgggcaa tacatggttt ggaccggcgc agtagtcgcc gaggctttcg
     7381 ccggtgtagc gtcccatgaa aatcgcaccg gcgtggcgga tttttttcgc ccattcctgc
     7441 ggattttcga ctgacagttc caagtgttcg ggggaaatgt agttggcgat ttcgcaggct
     7501 tcgtccaagt ctttggcgag tatcatcgcg cccctgttgc cgagcgaggc ttcgatgatg
     7561 tcgcggcgcg gcatagtttc gatcaggcgg tccatagcgg cttctacttc gtcgagatac
     7621 gcttgcgacg tgccgatgag gatggcttgg gcaatttcgt cgtgttcggc ctggctgaac
     7681 aaatccatcg ccacccaatc ggcaggtgtc gtgccgtcgg cgatgaccag gatttcagac
     7741 ggccccgcca ccatgtcgat gccgaccacg ccgaacacgc ggcgtttggc ggcggcgacg
     7801 aaggcgttgc ccggaccggt gattttatcg acttggggga tggtttccgt gccgtaggcg
     7861 agggcggcaa ccgcctgcgc gccgccgacg gtgaagactt tggttacgcc ggcgacgtat
     7921 gcggcggcaa gcacgatgtc gttgcgttcg cctttcggtg tcggcacgac catgatgatt
     7981 tctttcacgc ctgcgacgtg ggcgggcatg gcgttcatga tgacggaact cggatatgcc
     8041 gccttgccgc cggggacgta aatgccgacg cggtcaagcg gggtaatctg ttgtcccaac
     8101 agcgtgccgt cttcatcggt gtagctccac gattccattt tttggcgttg gtggtagctt
     8161 tcgacacggc gggcggcggt ctgcaatgcc gtctgaacgt cgttcggaat gcgctcgaac
     8221 gccgcgttca aatcggcttg cgtgagtatt aaatcatcga tgcttttagc gtttgtctga
     8281 tcgaatttgt tggtgtattc aatcaaagcc gcatcgccgc gcttttgcac gtcggcgcaa
     8341 atgtcggcga cgatgcgttc ggtttcgggg ttttgcgcgg tttcaaaagc cagcagggct
     8401 ttgagtccgg cttggaaatc gggcgattgg gtgttgagtt ttttcatgat ttggtttttt
     8461 ccttttttat ttttggattg ggggtcgtct gaatattctc ttgttcagtt tctgtctctg
     8521 ttttgggtct gatatacgct ttttctcccc cgctaccaaa cttcaattcg ggcaggcatt
     8581 tttgttgcag accgagtttg gctaatacct cttcgctacg agaggtagtg cggaaacggt
     8641 aacgggattg ttttctaccg tttttggttt cctcaaccat tgtttcaaaa ccgtccactt
     8701 cgtatgcact gacaacagcg ttttgcagac cggtgtgaac gccgataacg tatttcactt
     8761 ttgaagcaac atctttaccg ataacccagt tgcccaacgt acgcgatttg aggttggcat
     8821 cgtcttggtt gtcgaaaagg tagtctaatt cttcgtcagt atctaaatcg aaagcattgt
     8881 ggattttgat ggcgagaatc agcccgtcgg ggttaatctc gttaagtggg agagaagaga
     8941 atccaaagcg gcgatctagt tcttctacgc taataccacc cggaccatgc ccggcaattt
     9001 tatttttgag ttttttaccc aagacagatt taacaaaatg aattaaggca gattcggcgg
     9061 cgagtgcttc gacttcagtc agatgatagc tgatgatata gcgaccgagt ttcttgcatt
     9121 tggagatggc tttgagtttc cgatcgataa tctcgccgga gactgggtct tgtgaacgac
     9181 tagcaaccca ttcatgctcg aagatacgat taccgcagcc tttgccgatg tagaggattt
     9241 tgtctttttt caggtcggtc agacaataga cataaaaccg acgctcgccg ttattcaaaa
     9301 cggaaagggt tgaatctgag aattttttta tttttgcaac cattttaact tctcctatac
     9361 agtttactgc cggtgatatt ttcagacgac ctgtcggcgg gaacggatag ggtcgtctga
     9421 aaacgcatct ttattcaaat ggatgcttac ttcgccttca ctgcgccgcc gaacgcctga
     9481 ataatcggct ccagcagcgc gtatttcgtt ttcaaagcag ccttgttgac caccaggcgg
     9541 ctggaaatgt cgacgatgtg ttcgactgct tccaagccgt ttgccttcaa ggtgttgccc
     9601 gtcgaaacca agtccacaat cgcatcgctc aagccgacca gcggcgcaag ttccatcgag
     9661 ccgtacagtt tgataatgtc cacatggaca cccttgccgg caaaatgaga tgccgcgatt
     9721 tcaggatact tcgtggcaat cttcagacgg catccgggtt gcgaagctgc ttcgtaatca
     9781 aaccctttac gcacagcaac catcatgcgg cacttggcaa tctccaaatc caaaggccgg
     9841 taaagccccg tgccgccgtg ttcgatcagc acgtctttgc ccgcaatgcc gaagtccgcc
     9901 gcgccgtagc ggacataagt cggcacatcg gttgcgcgga caatgacaag gcggatgttt
     9961 tcatggttcg tcccgataat cagcttgcgc gatttttcag gctcttcagt cggaacaatg
    10021 ccggcagcgg caagcagcgg cagcgtctcc tcaaaaatgc gccccttgga taaggcgatg
    10081 gtcaaagcat tatcctgcat ggtgtggatg tcctttgtcg gttgaaacaa taatgccgtc
    10141 tgaataggcg ccgacggtgc agacggcata cggttttatc agagcagagt ccttacatcg
    10201 gcagcaatcg tttccggctc gcttccgtaa ggcgagaaaa tggcaacctc accgtttttg
    10261 tcgatgagat acgcaccgga agagtggtcg accaaatagt tttcgctgtc gtctttttga
    10321 ttgactttgg cagaaaccac gcggtattgc tgcttgatga ccggcaggtt ttggtcgccc
    10381 gttgccgtca gaccgataaa gtccggattg aactgtttgg catacttgcc gatgatttca
    10441 ggcgtgtcgc gttccggatc gatgctgacg aacaccactt tcacgtcctt agcctgcccg
    10501 cccaactgct tcaacgtgtc gctgtacgtc aaaagctctg tcgggcagac atcgggacag
    10561 tgcgtaaagc cgaaagacag aatcacgacc ttgcctttca aatcgctcag gctgaaaggc
    10621 ttgccttcgc cgtcggtcag cgtgaaatcg ccgccgatgt cttccttacg catatccgta
    10681 ccgcgcgttt gcggctttgc cgcattttcc gcagctgacg cggatgcact tgaagaagcg
    10741 gcttgcgccg cactgttgtc ttgaggtttg caggcggcaa gcgcggcaag tacgaaaacg
    10801 cccggcaaaa aggaacgcgg tacggaaaac atgacaatct cccaagaata aatagcaaaa
    10861 cctgattcgt acggaatttg aatatttcca tcttaacgcg tttggcagat ttaatgtagt
    10921 atttttttac gttgtttgca cggcaggaat tgccgaatca tacagaatct ttggagcgga
    10981 aagaacagta agattaaaat aataaaaatt ctatttaaaa tcaaaaataa aataaaaaca
    11041 gataaaataa tttcaaaaaa aaggtttaca gaatttcaaa agccattata atgacgactt
    11101 cttcaccagc ccaggtggcg aaattggtag acgcagggga ctcaaaatcc cccgccgcaa
    11161 ggtgtgtcgg ttcgagtccg accctgggca ccacaaccgc ttttagagcg gttatttttt
    11221 tgtctattgc tgtttaatga aatagataaa actaa
//
LOCUS       DAWITQ010000053        11065 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.053, whole genome shotgun sequence.
ACCESSION   DAWITQ010000053 DAWITQ010000000
VERSION     DAWITQ010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11065)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11065)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11065
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.053"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(60..1616)
                     /gene="dnaA"
                     /locus_tag="WIX18_001081"
     CDS             complement(60..1616)
                     /gene="dnaA"
                     /locus_tag="WIX18_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEZ5238196.1"
                     /translation="MTLAEFWPLCLRRLHDMLPQGQFAQWIAPLTVGEEGGVWVVYGK
                     NQFACNMLKSQFAGKIEAVREELAAGRSAFVFKPGEGVRYEMAAVEGAVEPAEPSLHA
                     GSEEMPVQEVLLDELPSEEPVKPAASKTAADILAERMKNLPHEPRHTAEPASRPESEV
                     LAKARTDAQRDAEEARYEQTNLSPDYTFDTLVEGKGNRLAAAAAQAIAESPGQSYNPF
                     FLYGSTGLGKTHLVQAVGNELLKNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQY
                     KQYDLLIIDDIQFIKGKDRTMEEFFYLYNHFHNEKKQLILTCDVLPAKIEGMDDRLKS
                     RFSWGLTLELEPPELEMRIAILQKKAEAAGISIEDEAALFIANLIRSNVRELEGAFNR
                     VGASSRFMNRPVIDIDLARTALQDIIAEKHKVITADIIIDAVAKYYRIKISDVLGKKR
                     TRNIARPRQVAMSLTKELTTLSLPSIGDSFGGRDHTTVMHGIRAVAKLREEDPELAQD
                     YEKLLILIQN"
     gene            1909..2043
                     /gene="rpmH"
                     /locus_tag="WIX18_001082"
     CDS             1909..2043
                     /gene="rpmH"
                     /locus_tag="WIX18_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011289924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEZ5238197.1"
                     /translation="MKRTYQPSVTKRKRTHGFLVRSKTRGGRAVLAARRAKGRKRLAV
                     "
     gene            2046..2411
                     /locus_tag="WIX18_001083"
     CDS             2046..2411
                     /locus_tag="WIX18_001083"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HEZ5238198.1"
                     /translation="MDYRFGRQYRLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDH
                     PRIGLVVGKKTAKRANERNYMKRVIRDWFRLNKNRLPPQDFVVRVRRKFDRATAKQAR
                     AELAQLMFGNPATGCRKQA"
     gene            2477..2698
                     /gene="yidD"
                     /locus_tag="WIX18_001084"
     CDS             2477..2698
                     /gene="yidD"
                     /locus_tag="WIX18_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEZ5238199.1"
                     /translation="MNFLLSKLLLGLIRFYQYCISPLIPPRCRYTPTCSQYAVEAVKK
                     YGAFKGGRLAIKRIARCHPFGGHGHDPVP"
     gene            2870..4507
                     /gene="yidC"
                     /locus_tag="WIX18_001085"
     CDS             2870..4507
                     /gene="yidC"
                     /locus_tag="WIX18_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEZ5238200.1"
                     /translation="MDFKRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQTAQQQAVTA
                     SAEAALAPATPITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFILFGDGKEYT
                     YVAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKG
                     SYLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKV
                     SFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDI
                     KRRNDKLYSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIADNLQLAKDYGKVH
                     WFASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQA
                     IKEKYGDDRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAP
                     WLGWITDLSRADPYYILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFF
                     PAGLVLYWVVNNLLTIAQQWHINRSIEKQRAQGEVVS"
     gene            complement(4588..5301)
                     /locus_tag="WIX18_001086"
     CDS             complement(4588..5301)
                     /locus_tag="WIX18_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEZ5238201.1"
                     /translation="MMSPVLYLIPTPLGTPDTPCLLPHEQQAIVGLTDFVVEAEKTAR
                     AHLKHLGVTMPIRELNLQTLNEHTDLKTLLELLKPLQEGRSMGIVSEAGCPAVADPGA
                     NLVALAHKHGFEVRPLVGPSSLLLALMASGANGQSFAFKGYLPSEKNERIQSLKALEQ
                     RSRQQNETQLFIETPYRNDVLLADAVENLHSETRLCTATDLTLPTQEIISQTVVQWRK
                     RKEMPNLKKRPTIFVMYAG"
     gene            complement(5360..5950)
                     /gene="maf"
                     /locus_tag="WIX18_001087"
     CDS             complement(5360..5950)
                     /gene="maf"
                     /locus_tag="WIX18_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation protein Maf"
                     /protein_id="HEZ5238202.1"
                     /translation="MGLELPLILGTSSVFRREQMERLGIAFQAASPDFDETPMLGESA
                     PQTALRLAEGKARSLTGRFPKALIVGADQVAWCDGRQWGKPMNLANAQKMLMHLSGRE
                     IEFYSAVVLLNTVTGRMQRHIDKTVVVMRQLDELHILRYLEREPDAVYCSCALKSEDL
                     GALLIERIESTDPNALIGLPVFRLVDFLKNEGVDVL"
     gene            6098..6601
                     /locus_tag="WIX18_001088"
     CDS             6098..6601
                     /locus_tag="WIX18_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HEZ5238203.1"
                     /translation="MSDPNLIDPEIFAAEGQNLQGSFLLEELDERVSSHDYPADRQTK
                     ISFTLTGGRDRLQRLFLDLNVKADMPLICQRCIKPMPFMLDESSRIVLFSNEESLDES
                     MLADEELEGILIEKELDVRTLVEDQILMSLPFSPRHEDCGDNGTLEEVNRDKPNPFAV
                     LAGLKSN"
     gene            6635..6814
                     /gene="rpmF"
                     /locus_tag="WIX18_001089"
     CDS             6635..6814
                     /gene="rpmF"
                     /locus_tag="WIX18_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009889986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEZ5238204.1"
                     /translation="MAVQQNKKSPSKRGMHRSHDALTAPALSVDSTTGEVHRPHHISP
                     NGMYRGRKVVKAKGE"
     gene            6989..7516
                     /locus_tag="WIX18_001090"
     CDS             6989..7516
                     /locus_tag="WIX18_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HEZ5238205.1"
                     /translation="MKQKIWYTYDDIHRVIKALAEKIRNADIKYDAMIAIGGGGFIPA
                     RMLRCFLEIPIYAVTTAYYDSDNEGQVTEEVKKVQWLDPVPEALRGKNVLVVDEVDDS
                     RVTMEFCLTELLKEDFGTIGVAVLHEKIKAKAGKIPEGIPYFSGITVEDWWINYPWDA
                     LDIDEHNRLAEAGRG"
     gene            7604..8659
                     /gene="plsX"
                     /locus_tag="WIX18_001091"
     CDS             7604..8659
                     /gene="plsX"
                     /locus_tag="WIX18_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HEZ5238206.1"
                     /translation="MITLAVDAMGGDQGLAVTVPGATAFLQAHPDVRLIMTGDETQLR
                     QALTAAGAPMERIDICHTTQVVGMDESPQSALKNKKDSSMRVAINQVKEGKAQAAVSA
                     GNTGALMATARFVLKTIPGIERPAIAKFLPSDTDHVTLALDLGANVDCTPEQLAQFAV
                     IGSELVHALHPQKGQPRVGLVNVGTEDIKGTDTVKQTYKLLQNSKLNFIGNIESNGIL
                     YGEADVVVADGFVGNVMLKTIEGAVKFMSGAIRREFQSNLFNKLAAVAALPALKGLKN
                     KLDPRKFNGAILLGLRGIVIKSHGGTDETGFRYALEEAYHEAKSAGLSKIEQGVAEQL
                     AALETAKAVQNENVGGL"
     gene            8795..9046
                     /locus_tag="WIX18_001092"
     CDS             8795..9046
                     /locus_tag="WIX18_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafI family immunity protein"
                     /protein_id="HEZ5238207.1"
                     /translation="MKTLEKRMKALDKRMMKFGKSLEGRLDARLIESALDYIHYSERF
                     LAFEILCTYIEDFDVRLTEQESREISFINKEFEIESTSD"
     gene            9073..9489
                     /locus_tag="WIX18_001093"
     CDS             9073..9489
                     /locus_tag="WIX18_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238208.1"
                     /translation="MKTSTVVFGGFFMADNRERIQIPVLENPGIREINHFFSVSNFEK
                     KAGVLVFRIIPEPKFGNTELTIYFEEGCYLPMIQTILEDGDIEVKNLKTENYSGNTME
                     IWGDFYPIEHISKNISTIQNIISEFMIQKQTPAPII"
     gene            9509..9712
                     /locus_tag="WIX18_001094"
     CDS             9509..9712
                     /locus_tag="WIX18_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238209.1"
                     /translation="MPSEACLVFRRHFLRLKQRIGNPALPIHGNLHLKTICIPNHTPI
                     PVSVICTLSVLGNHRFFAYNSRI"
     gene            9739..10701
                     /locus_tag="WIX18_001095"
     CDS             9739..10701
                     /locus_tag="WIX18_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HEZ5238210.1"
                     /translation="MQYAKISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRH
                     IAAENEKTSDLAAEAARRALDAAGLDSGEIDLIIVATATPDMQFPSTATIVQQKLGIT
                     NGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSRIVDWNDRTTCVLFG
                     DGAGAVVLSASDTPGIIHSKLKADGNYLKLLNVPGQIACGKVSGSPYISMDGPGVFKF
                     AVKMLSKIADDVIEEAGYTAAQIDWIVPHQANRRIIESTAKHLGLSMDKVVLTVQDHG
                     NTSAASIPLALDTGIRSGQIKRGQNLLLEGIGGGFAWGAVLLQY"
     gene            10748..>11065
                     /locus_tag="WIX18_001096"
     CDS             10748..>11065
                     /locus_tag="WIX18_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HEZ5238211.1"
                     /translation="MKRQAFFKLMACAAFLSAVSLRLPVLGACYAILSLYAFALYGID
                     KRRAVRGKRRIPEHRLLLPALFGGWAGAYLGSRIFRHKTAKKRFVVLFRLTVSGNVLA
                     TLIL"
BASE COUNT         2855 a         3286 c         2560 g         2364 t
ORIGIN      
        1 ctatatcttt acccttcgga cggcatgggc aatatcatgt cgtctgaaaa cgttttccat
       61 cagttttgaa tcagaatcag cagcttttca taatcctgag ccaattccgg atcttcttcg
      121 cgcagtttcg ccactgccct gatgccgtgc ataacggtcg tatggtcgcg tccgccgaac
      181 gaatcgccga tagacggcag gctcaaagtg gtcagttctt tggtcaggct catcgccacc
      241 tggcgcggac gggcaatgtt tcgtgtccgt ttcttaccga gcacatcgct gattttgatg
      301 cggtaatatt tcgcaacggc atcaataata atatcggcgg tgatgacttt gtgcttctcg
      361 gcaataatgt cctgcaaagc agtacgcgcc aaatcgatgt cgatgacggg acggttcata
      421 aagcggctgc tcgctccgac gcggttgaac gcgccttcaa gctcacgcac gttggaacgg
      481 atcagattgg caatgaacag cgcggcttcg tcttcaatac tgatgcccgc cgcttccgcc
      541 tttttctgca aaatggcgat acgcatttcc aattcgggcg gctcgagttc caaagtcagt
      601 ccccatgaaa aacgggattt gaggcggtcg tccatacctt cgattttggc gggtaaaaca
      661 tcgcaagtga ggatgagctg ttttttctcg ttatggaaat gattgtacag atagaagaat
      721 tcctccatcg tacggtcttt gcctttgatg aactggatgt cgtcgataat cagcaggtcg
      781 tattgcttgt attgctgctt gaacacgtcg taggtattgt tgcgaaccgc cttcataaag
      841 ctgcggatat agtcgtccga atgcatatag cgcactttgg catcgggacg gtttttcaaa
      901 agctcgttgc cgaccgcctg taccaggtgg gttttgccca aacccgtgct gccgtacagg
      961 aaaaacgggt tgtagctctg ccccgggctt tccgcaatcg cctgcgccgc agccgccgca
     1021 aggcggttgc ccttgccttc gaccaatgtg tcgaacgtat agtccggcga cagattggtc
     1081 tgctcgtaac gtgcctcttc cgcatcgcgc tgcgcatccg tccgcgcttt cgcaagcacc
     1141 tccgattccg gacgggaagc aggttcggca gtatggcgcg gctcatgcgg gaggtttttc
     1201 atacgttccg ccagaatatc cgccgccgtt ttcgacgcag cgggtttgac aggctcttca
     1261 gacggcagct cgtccaacag aacctcctgc acaggcatct cctccgaccc cgcgtgcaag
     1321 gacggctcgg caggttcgac agcaccttca accgccgcca tctcataacg cacgccttct
     1381 cctggtttga atacgaaggc ggaacggcca gcagccaact cttccctcac cgcttctatt
     1441 ttcccggcaa actggctctt aagcatattg caggcaaact ggttcttgcc gtacaccacc
     1501 catacgccac cctcctcacc gacggtaagg ggcgcaatcc attgcgcaaa ctgcccttga
     1561 ggcaacatat cgtgaagacg gcggaggcac agcggccaaa actctgctaa tgtcatggat
     1621 aagctcgaat cggtaaaaat gaaatcgaaa acaaagaaaa tataatattt tcaaaaagaa
     1681 aacaaatctg ttgaacacac atcggttcaa aatgcagcga accgaattat accgactcgc
     1741 cgatatttta tccacaaccc gtgcaaaatt tatccacaga aaggcggcag aaatccgcag
     1801 gcaatcgggc aatcctcctg caaagtttct atattgattg acaaaagcgg caaattggag
     1861 tgtaattcac ggtttaatta tctacccatt ctatttttag gaaacatcat gaaacgcact
     1921 tatcaacctt ccgttaccaa acgcaaacgc acccacggct tcctggtgcg ctccaaaaca
     1981 cgcggcggcc gcgcagtatt ggctgcacgc cgcgccaaag gccgcaaacg cctggcggta
     2041 taattttgga ctaccgcttc ggaaggcagt accgcttgtt gaaaacggat gatttttcat
     2101 ccgtttttgc attcagaaac cgccgcagcc gcgacctgct gcaagtttcg cgttcaaacg
     2161 gcaacgggct ggaccatccc cgcatcggtc tggtggtcgg caaaaaaacc gccaaacgcg
     2221 ccaacgaacg aaattatatg aagcgcgtca tccgcgactg gttcagattg aacaaaaacc
     2281 ggctgccgcc gcaggatttc gtcgtgcgcg tccgccgtaa attcgacagg gctaccgcaa
     2341 aacaggcaag ggcggaactg gcacaactca tgttcggcaa ccccgcaacc ggatgcagga
     2401 aacaggcatg atcagaacgg tactctgcag gcaaggttca gacggcaacg ggtttcccat
     2461 actaaggaac atcccgatga acttcctatt gtccaaactc ctgctgggac tgatacggtt
     2521 ctaccaatat tgcatcagcc cgctgattcc gccgcgctgc cgttatacgc cgacctgttc
     2581 gcaatacgcg gtcgaagcgg tcaaaaaata cggcgcattc aaaggcggcc ggctcgccat
     2641 caagcgcatt gcacgctgcc accctttcgg cggacacgga cacgaccccg ttccctgacc
     2701 cgacgcaata ttcaaattgc acgctttcct tttatttccc atcggtttct atataatgcc
     2761 gtctgaactt tcgggctggc ggcacgaccg tcgggtatga agcccgccct tattccccgt
     2821 ctatcggaac acgcaacctg cggcatttcc gaccattcag gaaactctta tggattttaa
     2881 aagactcacg gcgtttttcg ccatcgcact ggtgattatg atcggatggg aaaagatgtt
     2941 ccccactccg aagcccgtcc ccgcgcccca acagacggca caacaacagg ccgtaaccgc
     3001 ttccgccgaa gccgcgctcg cgcccgcaac gccgattacc gtaacgaccg acacggttca
     3061 agccgtcatt gatgaaaaaa gcggcgacct gcgccggctg accctgctca aatacaaagc
     3121 aaccggcgac gaaaataaac cgttcatcct gtttggcgac ggcaaagaat acacctacgt
     3181 cgcccaatcc gaacttttgg acgcgcaggg caacaacatt ctaaaaggca tcggctttag
     3241 cgcaccgaaa aaacagtaca gcttggaagg cgacaaagtt gaagtccgcc tgagcgcacc
     3301 tgaaacacgc ggtctgaaaa tcgacaaagt ttatactttc accaaaggca gctatctggt
     3361 caacgtccgc ttcgacatcg ccaacggcag cggtcaaacc gccaacctga gcgcggacta
     3421 ccgcatcgtc cgcgaccaca gcgaacccga gggtcaaggc tactttaccc actcttacgt
     3481 cggccctgtt gtttataccc ctgaaggcaa cttccaaaaa gtcagcttct ccgacttgga
     3541 cgacgatgcc aaatccggca aatccgaggc cgaatacatc cgcaaaaccc cgaccggctg
     3601 gctcggcatg attgaacacc acttcatgtc cacctggatc ctccaaccca aaggcggaca
     3661 aagcgtttgc gccgctggcg actgccgtat cgacatcaaa cgccgcaacg acaagctgta
     3721 cagcaccagc gtcagcgtgc ctttagccgc tatccaaaac ggtgcgaaat ccgaagcctc
     3781 catcaacctc tacgccggcc cacagaccac atccgttatc gcaaacatcg ccgacaacct
     3841 gcaactggcc aaagactacg gcaaagtaca ctggttcgcc tcccccctct tttggctttt
     3901 gaaccaactg cacaacatca tcggcaactg gggctgggcg attatcgttt taaccatcat
     3961 cgtcaaagcc gtactgtatc cattgaccaa cgcctcttac cgttcgatgg cgaaaatgcg
     4021 tgccgccgcg cccaaactgc aagccatcaa agagaaatac ggcgacgacc gtatggcgca
     4081 gcaacaagcc atgatgcagc tttacacaga cgagaaaatc aacccgctgg gcggctgcct
     4141 gcctatgctg ttgcaaatcc ccgtcttcat cggattgtat tgggcattgt tcgcctccgt
     4201 agaattgcgc caggcacctt ggctgggttg gattaccgac ctcagccgcg ccgaccccta
     4261 ctacatcctg cccatcatta tggcggcaac gatgttcgcc caaacctatc tgaacccgcc
     4321 gccgaccgac ccgatgcagg cgaaaatgat gaaaatcatg cctttggttt tctccgtcat
     4381 gttcttcttc ttccctgccg gtctggtatt gtactgggtg gtcaacaacc tcctgaccat
     4441 cgcccagcaa tggcacatca accgcagcat cgaaaaacaa cgcgcccaag gcgaagtcgt
     4501 ttcctaaatg ccgcagcatg aaaaatgccg tctgaaacct gttcagacgg catttttatt
     4561 gttcaccccc tatcggggcg gaaatcttca acctgcatac atcacaaaaa tcgtcgggcg
     4621 ttttttcaga ttgggcattt cttttctttt tcgccactgc acaaccgtct ggctgatgat
     4681 ttcctgagtc ggcaacgtca aatccgtagc cgtacacaaa cgcgtttcag aatgcaggtt
     4741 ttccaccgca tccgccaaca acacatcgtt gcgatacggc gtttcgataa acagctgcgt
     4801 ttcattctgc tggcgcgaac gttgctccaa agccttcaaa ctctgaatcc gctcgttttt
     4861 ttcagacggc agataaccct taaacgcaaa actctgcccg ttcgcacccg aagccatcaa
     4921 agccagcagc aggctggaag gcccgaccag cggacgcact tcaaaaccgt gtttatgcgc
     4981 caaagccacc agattcgcac ccggatcggc aacagccggg caacccgcct cgctgacaat
     5041 gcccatactg cgcccttctt gcaaaggttt cagcaattcc agcaaagtct tcaaatccgt
     5101 gtgttcgttc agcgtttgca aattcagttc gcggataggc attgtcacgc ccaaatgttt
     5161 caaatgcgcg cgcgccgttt tttccgcttc cacgacaaaa tccgtcagcc cgacaatcgc
     5221 ctgttgttca tgcggcaaca ggcacggcgt atcgggcgta cccaaaggcg taggaatcaa
     5281 atacaaaaca ggagacatca ttccctcact catcggttaa aaatgccgtc tgaacccttc
     5341 agacggcata aacgggcagt tacaaaacat ccacgccctc atttttcaaa aaatcgacca
     5401 gacggaaaac cggcaaaccg attaaagcat tcggatcggt actctcaatc ctttcaatca
     5461 acaatgcacc caaatcctca ctcttcagcg cacacgaaca ataaaccgca tcaggctcgc
     5521 gctccaaata gcggaggatg tgcaactcgt ccaactgcct catcacgacc accgtcttat
     5581 cgatatgccg ctgcatcctg cccgtaaccg tatttagcag aacgaccgcg ctgtaaaact
     5641 caatctccct gccgctcaaa tgcatcaaca tcttttgcgc attagcaagg ttcatcggct
     5701 tgccccactg cctgccgtcg caccacgcca cctggtccgc accgacaatc aacgcctttg
     5761 ggaaacgccc ggtcaacgac cgcgccttac cctcggcaag gcgcaatgcc gtctgagggg
     5821 cggattcccc caacatcggc gtttcgtcaa aatcggggga cgccgcctga aaggcaatgc
     5881 cgagcctttc catctgttcg cggcggaaaa ccgaactcgt acccaaaatc aaaggcagtt
     5941 ccaaacccat cccatcctcc ttaccgttga aaacacgccc gaaggggcgg taaaatccag
     6001 ccatgcgccg aaacacggat acccgccttc ggcgtaccgc aacatttttc ttaaaaatat
     6061 tgacgttaga acatctaaat tatatcatac cccgtttatg tcagacccta atttgattga
     6121 cccggaaatt ttcgccgccg aagggcagaa tctgcaaggc agttttctgc tggaagaatt
     6181 ggatgaacgc gtcagttcgc acgattatcc cgccgacagg cagaccaaaa tatcgtttac
     6241 actgaccggc ggtcgcgacc ggctgcaacg cctgttcctc gacctgaacg tcaaagccga
     6301 tatgcccctg atttgccaga gatgtatcaa acccatgccg ttcatgcttg atgaaagcag
     6361 ccgtatcgtc ctgttttcca acgaagagtc cttggacgaa tccatgcttg ccgacgaaga
     6421 actcgaaggc atactgattg aaaaagaact cgacgtgcgc acattggtag aagaccaaat
     6481 cctgatgtcc ctgccctttt cgccgcgaca cgaagactgc ggcgacaatg ggacactgga
     6541 agaagtcaat cgggacaaac ccaacccctt tgctgttttg gcaggtttga aaagcaattg
     6601 attaggacac agtttattta tctaggagct tgaaatggcc gttcaacaaa acaaaaaatc
     6661 cccttccaaa cgcggtatgc accgttcgca cgacgcgctg accgcgcctg cactgtctgt
     6721 cgacagcaca accggcgaag tacaccgccc gcaccacatc tcccccaacg gtatgtaccg
     6781 cggccgcaaa gtggtcaaag ccaaaggcga ataatcccta ttcgactgac tgaaaaagcc
     6841 agaacattgc catgcaatta ctggcttttt ttgcattgga cgcaccatcc gtccaaactt
     6901 tcgccatacg tcaacacaca ggggcaaagc gttccgtata ataccccgtg aaaatattcc
     6961 aaaagcccca accaccaagg aaattccgat gaaacagaaa atctggtaca cctacgatga
     7021 catccaccgc gtcatcaaag cattggcaga aaaaatccgg aacgccgaca tcaaatacga
     7081 tgccatgatt gccatcggcg gcggcggctt tattccggca cgtatgctgc gctgttttct
     7141 ggaaattccg atttatgccg taaccaccgc ctattacgac agcgacaacg aaggacaggt
     7201 tacagaagaa gtcaaaaaag tccaatggct cgaccccgtt cccgaagccc tgcggggcaa
     7261 aaacgtcctt gttgtcgatg aagtggacga cagccgcgta accatggaat tttgcctgac
     7321 agagctgctc aaagaagact tcggtacgat cggcgtcgcc gtactgcacg aaaaaatcaa
     7381 agccaaagca ggcaaaatcc ccgaaggcat tccctatttc agcggcatca ccgtagaaga
     7441 ctggtggatc aactatccgt gggacgcact cgacatcgac gaacacaacc gccttgccga
     7501 ggccggccga ggctgaccct ttcagacggc atattttccg aaccgatgcc gtctgaagcc
     7561 cgcacgaccc ctgccgcaga ccgaaaacct accggagaac cctatgatta cacttgccgt
     7621 agatgccatg ggcggcgacc aaggacttgc cgttaccgta cccggcgcaa ccgcattcct
     7681 ccaagcacac cccgatgtcc gcctgattat gaccggcgac gaaacgcaac tgcgccaagc
     7741 cctgaccgcg gcaggcgcac cgatggaacg catcgacatc tgccatacca cccaagttgt
     7801 cggcatggat gaatcccctc agtccgccct aaagaacaaa aaagactcct ccatgcgcgt
     7861 tgccatcaac caagttaaag aaggcaaagc ccaagccgcc gtatccgcag gcaacacggg
     7921 cgcactcatg gcaaccgcac gtttcgtcct caagaccata cccggtatcg aacgccccgc
     7981 catcgccaaa ttcctcccgt ccgacaccga ccatgttacc ctcgccctcg accttggcgc
     8041 gaacgtcgac tgcacgcccg aacagctcgc ccaatttgcc gttatcggca gcgaactcgt
     8101 ccacgcactc catcctcaaa aaggacagcc gcgcgtcggg ctggtcaacg tcggcacgga
     8161 agacatcaaa ggtacggaca ccgtcaaaca aacctacaaa ctgctgcaaa acagcaaact
     8221 caactttatc ggcaacatcg aaagcaacgg catcctgtac ggcgaagcag atgtcgtcgt
     8281 cgccgacggc tttgtcggca acgtcatgct caaaaccatc gaaggcgcgg tcaaattcat
     8341 gagcggagcc atccgccgcg aattccaaag caacctgttc aacaaacttg ccgccgttgc
     8401 cgccctaccc gccctcaaag ggctgaaaaa caaactcgat ccgcgcaaat tcaacggggc
     8461 catcctgctc gggctgcgcg gcatcgtcat caaaagccac ggcggcacag acgaaaccgg
     8521 tttccgctac gcactcgaag aagcctacca cgaagccaag tccgccggcc tttccaaaat
     8581 cgaacaaggc gttgccgaac aactcgccgc actcgaaact gccaaagccg tccaaaacga
     8641 aaatgtcggc ggtctgtaac acacacgatg ccgtctgaac gcccccgccc ctttcagacg
     8701 gcatccgccc gccccgaacc tgcgggcgcg gacggcgatg cacctgtccg gcacttccca
     8761 aatacttccc tgtaaaataa ggaatatttg aaaaatgaag acattagaaa aacggatgaa
     8821 agctctagac aaacggatga tgaagttcgg aaaatccctt gaaggcaggc ttgatgcccg
     8881 tctgattgaa tccgcattgg attatattca ttattcggaa cgttttttgg cttttgaaat
     8941 cctgtgtact tatatcgaag atttcgatgt ccggctgacg gaacaagaat cccgggaaat
     9001 ttcttttatc aacaaggaat ttgagataga aagcacgtcc gattaaccaa taaagccaat
     9061 gatttgataa gaatgaaaac atcgacggtc gtttttggcg gattttttat ggcagacaac
     9121 agggagcgaa tccaaatccc cgttttggaa aatcctggca ttagggaaat caatcacttt
     9181 ttttccgtat caaattttga gaaaaaagcc ggcgtccttg ttttcagaat tattcctgaa
     9241 cccaaatttg gcaataccga attaactatc tattttgaag aaggatgtta tttgccaatg
     9301 attcaaacaa ttttagaaga tggggatatt gaagtcaaaa accttaaaac agaaaattat
     9361 agtggaaata caatggaaat ttggggagac ttctacccta ttgagcatat ctctaaaaat
     9421 atttctacaa ttcaaaatat aatttctgaa tttatgatac aaaaacaaac accggcacca
     9481 ataatttgat ggaaaaccaa caatcaaaat gccgtctgaa gcatgtttgg ttttcagacg
     9541 gcatttcctt cgcttaaaac agcgtatcgg caaccccgcc ctgcctatcc acggcaatct
     9601 gcatctgaaa accatctgta tcccaaacca cacccccatc cctgtttccg tcatttgcac
     9661 cctgtccgta ttgggcaatc atcggttttt cgcttacaat agccgaatct gaaccaactc
     9721 tctaaaaagg ccgttcccat gcagtatgca aaaatttccg gcacgggcag ctatcttcct
     9781 gccaaccgcg tcagcaatga cgaccttgcc caaaaggtag atacctctga cgagtggatt
     9841 accgcgcgca cgggcatcaa gttccgccat attgcagccg aaaatgagaa aaccagcgat
     9901 cttgccgccg aagcagcccg ccgcgcgctg gatgcagccg gattagacag cggcgaaatc
     9961 gatttgatta tcgtggcgac ggcaacgccg gatatgcagt ttccttctac cgccaccatc
    10021 gtgcagcaaa aattgggcat caccaacggc tgtcccgcgt ttgacgtaca ggcggtgtgc
    10081 gccggcttta tgtacgcgct gaccacggca aacgcctaca ttaaaagtgg catggcgaaa
    10141 aacgcgctgg tcatcggcgc ggaaaccttc agccgcatcg tcgattggaa cgaccgcaca
    10201 acctgcgtat tgttcggcga cggcgcgggc gcggtggttt taagcgcgtc ggacacgccg
    10261 ggcatcatcc acagcaaact caaggccgac ggcaattatc tgaaactctt aaacgtcccc
    10321 gggcaaatcg cctgcggcaa agtttccggt tcgccgtaca tttcgatgga cggtcccggc
    10381 gtgttcaagt ttgccgtcaa aatgctgtcc aaaatcgccg atgacgttat cgaagaagcc
    10441 ggttataccg ccgctcaaat cgactggatc gtgccgcatc aggcaaaccg ccgcattatc
    10501 gaatcgaccg cgaaacattt aggtttgagt atggacaaag tcgtcctgac cgtccaagac
    10561 cacggcaaca catccgccgc atcgattccg ctggctttgg atacgggcat ccgcagcgga
    10621 caaatcaaac gcggtcaaaa cctgctgctc gaaggcatcg gcggcggttt cgcgtggggc
    10681 gcggtgctgt tgcaatattg aacccgatgc cgtctgaaac aggctttcag acggcatttc
    10741 ccatatcatg aagcggcagg ctttcttcaa actgatggcg tgtgcggcat ttctgtctgc
    10801 cgtttcgctg cgcctccccg tattgggcgc gtgttacgca atattgtccc tctatgcgtt
    10861 tgcactttac ggcatcgaca aacggcgtgc cgtgcgggga aaacgccgca ttcccgaaca
    10921 ccgcctgctg ctgcctgcct tgttcggcgg ttgggcgggc gcatacttgg gcagcaggat
    10981 attcaggcat aaaacggcga aaaagcgttt tgttgtgctg ttccgtctga ctgtttcggg
    11041 caatgtcctg gcgaccctca tcctg
//
LOCUS       DAWITQ010000054        11033 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.054, whole genome shotgun sequence.
ACCESSION   DAWITQ010000054 DAWITQ010000000
VERSION     DAWITQ010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11033)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11033)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11033
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.054"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            142..1539
                     /gene="aspA"
                     /locus_tag="WIX18_001097"
     CDS             142..1539
                     /gene="aspA"
                     /locus_tag="WIX18_001097"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HEZ5238212.1"
                     /translation="MTVRIEHDLLGDREIPAEVYWGIHTLRAIENFKISTQKISDVPQ
                     FVRSMVMVKKATAQANGELGAVKPEIAAAIEKACDEVLLNNRCLDQFPSDVYQGGAGT
                     SVNMNTNEVIANLALEVLGYEKGRYDIVNPMDHVNASQSTNDAYPTGFRLAVYYSIGE
                     LLDKLTVLKNAFAAKAEEFKDVLKMGRTQLQDAVPMTAGQEFQSFQVLLEEEILNLDR
                     TRQLLLEVNLGATAIGTGVNTPKGYAELVVKKLSEVSGLPCKLTENLIEATSDCGAYV
                     MVHGALKRTAVKLSKICNDLRLLSSGPRAGLKEINLPELQAGSSIMPAKVNPVIPEVV
                     NQVCFKVIGNDTTITFAAEAGQLQLNVMEPVIAQCMFETISLLGNAAVNLSDKCVKGI
                     TVNREICERYVFNSIGLVTYLNPYIGHHNGDLVGKICAQTGKGVREVVLERGLLSEEE
                     LNRILSPENLMNPHL"
     gene            complement(1611..2486)
                     /locus_tag="WIX18_001098"
     CDS             complement(1611..2486)
                     /locus_tag="WIX18_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ5238213.1"
                     /translation="MAYLLISIVFSVSVSILLKMARKKKIDIAQAVAVNYVVAVILTL
                     LVLKPDIGNIGAFLPTWPLFAALGVLLPSVFVIMGKSVEAAGIVKSDAAQRLSLFLPI
                     VAALTLFGEKLSEGKLIGLCLAFAALFCLLWKHSGGKKSGSAWRQAALLLGVWAGYGI
                     IDILFKQLAKSGTAFAGNLLVAFVLAGVLMFACLFAKSVRWRVESVVGGIFLGGLNFM
                     NIVTYITAHQMMKDNPTLVFAGMNIGVIVLGTLSGALFFKEKINTINTAGIVLALCSI
                     ACLFYWGEVKVLFGI"
     gene            complement(2488..3210)
                     /locus_tag="WIX18_001099"
     CDS             complement(2488..3210)
                     /locus_tag="WIX18_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HEZ5238214.1"
                     /translation="MDKDLYAVLGVSPQAGADEIKRAYRKLAMKYHPDRNPGNPKAEE
                     KFKEIQRAYDTLSDLSKRMQYDASFRRHEERGRQEEAFRREQARREQFYREQMRREQA
                     FRQAFERQASRSCHTYEPSGGGSGRNYVLAAYILFGLGAIMLFMPIVGVIFAYMPIVG
                     VILAYMKRNSLDSIVYAAHTEYLIKTFWRTFWLYILGALTALLGIGVLIIIATNVWYF
                     YRIIAGFIRFNGGRAVAPEKWI"
     gene            complement(3233..3712)
                     /gene="ybaK"
                     /locus_tag="WIX18_001100"
     CDS             complement(3233..3712)
                     /gene="ybaK"
                     /locus_tag="WIX18_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HEZ5238215.1"
                     /translation="MSKHTYPITPAVRVLRENGIEFEPFTYAYEEHGGTAQFARLFGK
                     DEHLVIKTIVLQDENGKGLIVLMHGDKQISTRNLARHLGAKHIEPATPVQANKWTGYL
                     VGGTTPFGIRTKLDIYVEQSVMDLETIYINGGKRGFIIGIRPGDLNILNPKTIQAAV"
     gene            3787..4149
                     /locus_tag="WIX18_001101"
     CDS             3787..4149
                     /locus_tag="WIX18_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEZ5238216.1"
                     /translation="MDIRYFGTTPRYSEAVGANGLIFLSGMVPENGETAAEQTADVLA
                     QIDRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVWDAWVAAGRTPARACVEARLARP
                     EWRVEIKITAVKKDAATA"
     gene            4184..5047
                     /locus_tag="WIX18_001102"
     CDS             4184..5047
                     /locus_tag="WIX18_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein YgfZ"
                     /protein_id="HEZ5238217.1"
                     /translation="MKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYN
                     TPKGRVIANMIVVNRGGDLLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAEL
                     EASAEPLAAQEPNLAFAAQQDSDGICSIALPHGGILRIAPKNTLPPYDAAAENAWRLH
                     EIRSGYPWICAATKETAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAV
                     LSGNSAVEAGTLLTADGEEAGIVLDSVQDSENFTALAVIKFSAAQKELAAPNGGIFKA
                     VHLFFKTENAE"
     gene            5141..6100
                     /gene="ttcA"
                     /locus_tag="WIX18_001103"
     CDS             5141..6100
                     /gene="ttcA"
                     /locus_tag="WIX18_001103"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HEZ5238218.1"
                     /translation="MSKKTKQELENNKLSKRLRHAVGDAINDFNMIEPDDKIMVCLSG
                     GKDSYALLDILRQLQASAPIDFQLVAVNLDQKQPGFPEEVLPTYLESIGVPYKIVEED
                     TYSTVKRVLDEGKTTCSLCSRLRRGILYRTAKELGCTKIALGHHRDDILATLFLNMFY
                     GGKLKAMPPKLVSDNGEHIVIRPLAYVKEKDLIKYAELKQFPIIPCNLCGSQPNLQRQ
                     VIGDMLRDWDKRFPGRIESMFSALQNVVPSHLADTELFDFVGLERGQTLKHGGDLAFD
                     SEKMPERFSDGSEEDESEIKIEPQKAERKVINILANKPKTCGA"
     gene            complement(6194..9133)
                     /locus_tag="WIX18_001104"
     CDS             complement(6194..9133)
                     /locus_tag="WIX18_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III restriction-modification system
                     endonuclease"
                     /protein_id="HEZ5238219.1"
                     /translation="MSGFNYEKNQPHQMRAVSAVLGVFDGATPKYRAADENPELLFAA
                     KQYADNILKVQSQNGIDGRFPDRSDDQNILDISMETGTGKTYTYTQTMFELHRWLGVF
                     KFIVVVPTLSIKAGTRQFLQSKALAEHFEQDFGGDYEGVRLKTYVVESAKKNKGKKSN
                     APITIEQFAKAENKKEIHVLLINAGMVNSSSMNDTGDKALKDLFDNPVDALAAVRPFV
                     IVDEPHKFPTRESAKTWGNIKRLKPQYILRYGATFNDEYYNLLYRLTAVDAFNDGLVK
                     GVRVFQEEMQGGMDAAVKLVSSGGKEAKFELNEKDKKQTFKLAKGEDLAKIHPAVSDL
                     KIDKMNKTVVVLSNGLELKTGAVINPYSYSQTVQDAMMQRAVAEHFKLERALLAERAP
                     QPKIKPLTLFFIDDIAGYRSGNELSGSLKDKFESWIHAEAARRLKTESDPFYRDYLQK
                     TLDDVSACHGGYFSKDNTDSDDRIEQEINEILHDKEKLLSLDNPRRFIFSKWTLREGW
                     DNPNVFQICKLRSSGSTTSKLQEVGRGLRLPVNELMARVRDVPYKLNYFVDSSEKDFV
                     KQLVGEINDNSFQEEISKKFTEELKQKILQKYPDIKPLGLLNKLFSDGIIDDNENFTE
                     DGYDKLKAAYPEAFPKGLDKGKVSNAKDEGKDTIIMREGKYEELKALWELIHHKAVLQ
                     YKIKDEAEFVDLFTAYLRENAAKFPQAGIRTAVNEAYINNGLMLSRRIDSFEDEDFIR
                     FNTMTYRELLEKLAQTAKIRMQTLHQAFYRVRNELNIGDFLNMQTIAQIKNGFNRFLL
                     HHSFHKFELDYQLVGSKIHPTKFTDKDGKPRAVKKADLGRFEDTEHRPAAGYLFDEIF
                     YDSDIEHENVANNQIEGVTVFTKIPRNSIKIPVAGGGTYSPDFAYIVKTQSGEILNFV
                     IEAKGTDGAEDLRKSEERKIKHAEKLFAEISKEIKVVFKTQFDGERIAELIGQNMPAG
                     GHSENGH"
     gene            complement(9146..10837)
                     /locus_tag="WIX18_001105"
     CDS             complement(9146..10837)
                     /locus_tag="WIX18_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEZ5238220.1"
                     /translation="MNWLGKSYARLLRNLPPETLISEDKTHNAKPENAGSQNLLIRGD
                     NLEVLKHLKNAYTNSVKMIYIDPPYNTGSDGFVYQDDRKFTPAELACLANIDEDEAAR
                     ILDFTDKGSNSHSAWLTFMYPRLYIARELLKDDGVIFISIDDNEAAQLKLLCDEVFGE
                     GNFIKDLIVNTSEGGGNAKYVVNGHETVLVYAKDITHFDNLKRPKDIRGKKIVINDEL
                     YWIQEDAVREQFGKYGNLHYEDIIEIKGIEFKNKIDKDIENNEYILIPKSYGKTIIGK
                     LRKVSDDFSKFHSILNIGNISKNLTKDGIRELEELFETGKGYSPFETPKPLDLLKRLV
                     LSATFKGNQTDLILDFFAGSGTTAHAVMQLNAEGQNGNRRYICVQLPEKTAEKSEARK
                     AGYPTIFDITKARIEKAAAKIRVEHPDYTGDSGFKIFQTADNFRQHPDKDFSPEQPDL
                     PLNDELSEEQLQTLLTTWTLYDGAALTTPVEPVRLGAYTAYLCEKRLYLMNAGFTSAD
                     LLAFIRKLDDDADFNPNRVIVFGSNMASAMQHELDQAVRGYANKKEIELNVIIRV"
BASE COUNT         2656 a         2946 c         2600 g         2831 t
ORIGIN      
        1 cccgaaaaca acgtttcccg ttttcagacg gcatacgata tggacaattt catccggccg
       61 gtatagtgtt catcctgcgg cggcatcttt ccgatggcgc attttttcaa tattaattat
      121 ccgacttaca aaggtaaaaa catgactgtc cgtatcgaac acgatttatt gggcgaccgc
      181 gagattcccg ccgaagtgta ttggggcatc cacaccctgc gcgccattga aaactttaaa
      241 atctccacac aaaaaatttc tgacgtgccg cagtttgtcc gcagtatggt gatggtgaaa
      301 aaggcgacgg cacaggcaaa cggtgagttg ggcgcggtca agcccgaaat cgccgccgcc
      361 attgaaaaag cctgcgacga agttctgctg aacaaccgct gcctcgacca attcccgtcc
      421 gacgtgtatc agggcggtgc gggtacttcg gtcaatatga acaccaacga agtcatcgcc
      481 aacctcgcat tggaagtctt gggatacgaa aaaggccgct acgacatcgt caatccgatg
      541 gatcacgtca atgccagcca atcgaccaac gatgcctatc ccacgggctt ccgccttgcc
      601 gtgtattaca gcatcggcga attgctcgac aaactgactg tcctgaaaaa cgcctttgcc
      661 gccaaagccg aagaatttaa agacgttttg aaaatgggcc gcacccagct tcaagatgcc
      721 gtgccgatga ctgccggcca agaattccaa tctttccaag tgttgttgga agaagaaatc
      781 ctcaacctcg accgcacccg ccaactgctg ttggaagtca atttgggcgc aacggcaatc
      841 ggcacgggcg tgaacacgcc caaaggctac gccgaactgg tggtcaaaaa actctccgaa
      901 gtcagcggct tgccttgcaa actgaccgaa aacctgattg aggcgacctc cgactgcggc
      961 gcatatgtga tggtacacgg cgcattgaag cgcacggcgg tcaaactctc caaaatctgc
     1021 aacgacttgc gcctgctctc ttccggcccg cgtgccggct tgaaagaaat caacctgccc
     1081 gaattgcagg ccggttcttc cataatgccc gccaaagtca atcccgtgat tcccgaagtg
     1141 gtcaaccaag tctgcttcaa agtcatcggc aacgacacga cgattacctt cgccgccgaa
     1201 gccgggcaac tgcaattaaa cgtgatggag ccggtcatcg cccaatgtat gtttgaaacc
     1261 atttccctct tgggcaatgc cgcagtcaac ctgtccgaca aatgcgtcaa aggcattacg
     1321 gtcaaccgcg aaatctgcga acgttacgtt ttcaactcca tcggtttggt gacttatctg
     1381 aatccgtata tcggacacca caacggcgat ttggtcggca aaatctgcgc ccaaaccggc
     1441 aaaggcgtgc gcgaggttgt cttggaacgc gggctgttga gcgaagaaga actcaaccgc
     1501 atcctctctc ccgagaacct gatgaacccc catctgtaac gttgcagaca aatgccgtct
     1561 gaagcaggga tgctgcttca gacggcattt tgttatatca atcagccgga ttatatgccg
     1621 aacagtacct tgacttcccc ccaataaaac aggcaggcga tagaacacag tgccaacacg
     1681 attcccgccg tattgattgt gttgattttt tccttaaaga acaatgcgcc cgaaagcgta
     1741 cccaaaacaa tcacgccgat attcataccg gcaaaaacca aggtcggatt atccttcatc
     1801 atttggtgcg cggtgatgta ggttacgata ttcataaaat tcaaaccgcc caagaatatg
     1861 ccgccgacca cactctcaac acgccatctg accgatttgg caaacaggca ggcaaacatc
     1921 agcacacccg ccagcacaaa tgcaaccagc aggttgcccg caaatgccgt tccgcttttg
     1981 gcaagctgtt tgaacaggat atcgataatg ccgtaacctg cccacacgcc cagcagcaat
     2041 gccgcctgcc gccacgcgct tcctgatttt ttgccaccgc tgtgtttcca aagcaggcag
     2101 aacagtgcgg caaatgcgag gcacagcccg attagtttgc cttcgctgag tttttcgcca
     2161 aacagcgtca aggcggcaac aatcggcaaa aacagcgaca aacgctgcgc cgcgtcggat
     2221 ttgacgatac cggcggcttc cacagatttg cccattatca cgaatacgga cggcagcagc
     2281 acgcccaaag cggcaaacag cggccacgtc ggcaaaaatg cgccgatatt gccgatatcc
     2341 ggcttcaata ccagcagggt cagtatgacc gcgaccacat aattgacggc gaccgcctgc
     2401 gcgatgtcga tttttttctt ccttgccatt ttcagcaaaa tggaaaccga cacgctgaac
     2461 acgatgctga ttaacaggta agccatacta tatccatttc tcgggtgcaa ccgccctgcc
     2521 gccgttgaag cggataaagc cggcgatgat gcggtagaaa taccagacgt tcgttgcaat
     2581 aataatcagc acgccgatac ccaaaagggc agtcagcgca cccaaaatat aaagccaaaa
     2641 tgtgcgccaa aaggttttaa tcaggtattc ggtatgtgcg gcatagacaa tgctgtccaa
     2701 actgttccgt ttcatatagg cgagaatcac gccgactatg ggcatatagg cgaaaatcac
     2761 gccgactatg ggcatgaaca gcatgattgc acccaaaccg aacaggatgt aggcggcgag
     2821 gacatagttg cgcccgcttc cgccgccgga cggttcgtaa gtatggcacg aacgtgatgc
     2881 ctgccgttca aacgcctgtc tgaacgcctg ttcgcggcgc atctgttcgc ggtaaaactg
     2941 ctccctgcgc gcctgttcgc ggcggaatgc ctcttcctgc cgcccgcgtt cctcatgccg
     3001 tctgaaggac gcgtcgtatt gcatccgttt cgacaggtcg gaaagcgtat cgtaagcccg
     3061 ttggatttct ttgaactttt cttccgcctt cggattgccc ggattgcggt cgggatgata
     3121 tttcatcgcc agcttgcggt aggcgcgttt gatttcgtcc gctcccgcct gcggcgacac
     3181 gcccaatacg gcatacaaat ctttgtccat attgttcctt tatactttcc cgtcaaaccg
     3241 ccgcctgtat tgttttcggg ttcaaaatat ttaaatctcc gggacggatg ccgataatga
     3301 acccgcgttt tccgccgttg atatagatgg tttccaaatc catcaccgac tgttcgacgt
     3361 aaatatccaa ctttgtccgg atgccgaacg gcgttgtgcc gccgaccaga tagcccgtcc
     3421 acttgtttgc ctgtacgggc gtggcgggtt cgatgtgttt cgcacccaaa tgccgcgcca
     3481 gattgcgggt tgaaatctgc ttgtcgccgt gcatcaagac aatcagcccc ttaccgtttt
     3541 catcttgcaa aacaatggtt ttaatgacca agtgttcgtc tttgccgaat agtcgggcaa
     3601 actgcgccgt gccgccgtgt tcctcatagg cataggtaaa aggttcaaat tcgatgccgt
     3661 tttcacgcaa aacgcgcacg gcaggtgtta tcggataagt gtgtttactc atttttcgtc
     3721 atgcaaaaca tggaaatcgg tcaagcgcaa tgttaccata tatccccttt atcgaaggaa
     3781 accgatatgg atatccgata tttcggcaca acgccccgct attccgaagc cgtcggcgca
     3841 aacggcttga ttttcctctc cggcatggtt cccgaaaacg gtgaaacggc tgccgaacag
     3901 actgccgacg tgcttgccca aatcgaccgc tggctggcgg aatgcggctc ggacaaagcg
     3961 cacgttttgg atgcggtcat ctatctgcgc gatatgggcg actatgcgga aatgaacggc
     4021 gtgtgggacg cttgggttgc cgccggcaga acgcccgccc gcgcctgcgt ggaagcgcgg
     4081 ctcgcccgtc cggagtggcg cgtcgaaatc aaaataaccg ccgtgaagaa agatgcggca
     4141 accgcataaa cagatttcct ttatatttca gagtacgcaa atgatgaaaa ccttactgcc
     4201 ctttttcggc gtggtacgcg tcagcggcga agaccgccaa accttcctgc acggacagct
     4261 ttccaacgac atcaataatc ttcagaccgg gcaggcgtgt tatgcgactt acaacacgcc
     4321 caaaggccgt gtcatcgcca atatgattgt cgtcaaccga ggcggcgatt tgctgctgat
     4381 tatggcgcaa gacttgcttg aagcaacggt caaacgtttg cggatgtttg tgttgcgtgc
     4441 caaagccgtt tttgaaatcc ttgaagatta cgccgtcggc gcggaattgg aagcatccgc
     4501 cgaaccgctt gccgcgcaag aacccaacct tgcctttgcc gcacaacaag attcagacgg
     4561 catctgctct atcgctctgc ctcatggcgg catccttcgc atcgccccca aaaacacctt
     4621 gccgccttat gatgccgccg ccgaaaacgc gtggcggctg cacgaaatcc gtagcggtta
     4681 tccgtggata tgcgcggcta ccaaagaaac tgccgttgcc caaatgctca accagcacat
     4741 catcggcggc gtacacttca aaaaaggctg ctatcccggt caggaaatca ttgcccgtgc
     4801 ccagtatcgg gggcaggtca aacgcggctt ggcggtattg tcgggaaatt cggccgtcga
     4861 agcaggaacc ctgctgacgg cggacggcga agaggccggc atcgtactcg acagcgttca
     4921 agattcggaa aactttaccg cccttgccgt gattaaattc tccgccgcac aaaaagaact
     4981 cgccgcccca aacggcggta tcttcaaagc ggttcatctc ttctttaaaa ccgaaaatgc
     5041 agaataatcc ctctgatgcc gtctgaagcc cttcagacgg cattgccgcc ccgtcaatcg
     5101 gttacaatgc cgcctttcta attttcaaac ccaaaccgcc atgtccaaaa aaaccaaaca
     5161 agaactcgaa aacaacaaac tcagcaaacg cctgcgccac gccgtcggcg acgcgattaa
     5221 cgatttcaat atgatcgagc cggacgacaa aatcatggtc tgcctctccg gcggcaaaga
     5281 cagctatgcc ctgttagaca tcctgcgcca gctccaagcc agcgcgccga ttgatttcca
     5341 actggttgcc gtcaatctcg accaaaagca gccgggcttc cccgaagaag tattgccgac
     5401 ctatctcgaa agcataggcg tgccgtacaa aatcgttgaa gaagacacct actccaccgt
     5461 caaacgcgta ttggacgaag gcaaaacgac ttgttcgctg tgcagccgcc tgcgccgcgg
     5521 catcctctac cgcactgcaa aagaattggg ctgcaccaaa atcgccttgg gacaccaccg
     5581 cgacgacatc ctcgccacct tgtttttaaa tatgttttac ggcggcaaac tcaaagccat
     5641 gccgcccaag ctggtgagcg acaacggcga acacatcgtc atccgtccgc tggcgtatgt
     5701 aaaagaaaaa gacttaatca aatacgccga attaaaacaa ttccccatca tcccgtgcaa
     5761 cctctgcggc tcgcaaccca acctgcaacg ccaagtcatc ggcgatatgc tgcgcgattg
     5821 ggacaaacgc ttccccggcc gcatcgaatc gatgttctcc gccctgcaaa acgtcgtccc
     5881 ttcccacctt gccgataccg aactcttcga ctttgtcgga ttggaacgcg gtcaaaccct
     5941 gaaacacggc ggcgatttgg cgtttgacag cgaaaaaatg cccgaacgtt tttcagacgg
     6001 cagcgaagaa gacgaaagcg aaatcaaaat cgagccgcaa aaagccgaac gcaaagtcat
     6061 caacattctg gcgaacaagc cgaaaacctg cggcgcgtaa acctccaccg tcaaaaatgc
     6121 cgtctgaagc ccgtttggcg tttcagacgg cattttaaaa tcccgaagca gacggcttcc
     6181 aaacatttgt ttctcagtgt ccgttttcag aatgcccgcc tgcgggcata ttttgcccga
     6241 tcagttcggc tatcctctcg ccgtcaaact gcgttttgaa caccaccttg atttctttgg
     6301 aaatctcggc aaacagcttt tcggcatgtt tgattttccg ctcttcgctt tttcgcaaat
     6361 cttccgcccc gtcagtccct ttggcttcaa tcacaaagtt cagaatctcg ccgctttggg
     6421 ttttcacgat ataggcaaaa tcgggcgaat acgtgccgcc gccggcaacg gggattttga
     6481 tggagtttct cggtatttta gtgaatacgg ttacgccttc aatttggttg ttggcgacat
     6541 tttcatgttc tatatccgaa tcgtagaaaa tctcgtcgaa gagatagccg gcggcaggcc
     6601 ggtgctccgt atcttcaaat cttcccaaat ctgctttttt caccgcgcgc ggtttgccgt
     6661 ctttatcggt aaatttggtc ggatggattt tgctgccgac aagctggtaa tccagttcga
     6721 atttatggaa ggaatgatga agcaaaaacc ggttgaagcc gtttttgatt tgggcgatgg
     6781 tctgcatatt caaaaaatcg ccaatgttca gttcgttgcg gacgcggtaa aacgcctgat
     6841 gcaaagtctg catgcggatt tttgccgttt gtgccagttt ttccagaagc tcacggtaag
     6901 tcattgtgtt gaaacggata aaatcttcat cttcaaagct gtctatgcgg cgggaaagca
     6961 taagcccgtt gttgatataa gcttcgttta ccgccgtgcg tatgcctgcc tgcgggaatt
     7021 tggcggcgtt ttcacgcaaa taggcagtaa ataaatcgac aaattcggct tcatctttga
     7081 ttttgtactg caaaacggct ttatggtgaa tcagctccca caaggctttg agttcttcat
     7141 atttgccttc gcgcatgatg atggtgtctt tgccttcgtc tttggcgttg ctgactttgc
     7201 ctttgtccaa acctttgggg aaggcttcgg gataggcggc ttttaatttg tcatagccgt
     7261 cttcggtaaa gttttcattg tcgtcaatga tgccgtctga aaacagtttg tttaacaatc
     7321 ccagaggttt gatatcgggg tatttttgca atattttttg tttcagctct tcggtaaact
     7381 tttttgagat ttcttcctga aaagaattat cgttgatttc gccgacaagc tgcttcacaa
     7441 agtctttttc gctgctatcg acaaaataat tcagtttgta cggcacatcg cgcacccgcg
     7501 ccatcagctc gtttaccggc aggcgcaggc cgcgtccgac ttcttgcagc ttggaagtcg
     7561 tgctgccgct ggaacgcagt ttgcaaatct ggaaaacgtt gggattgtcc cagccttcgc
     7621 gcagcgtcca tttggaaaaa ataaagcggc gcgggttgtc caaagacaac agtttttcct
     7681 tatcgtgcag gatttcattg atttcctgct cgattctatc gtcgctgtct gtattgtctt
     7741 tggaaaaata accgccgtgg caggcggata catcgtccaa cgtcttttgc aggtaatcgc
     7801 ggtaaaacgg gtcgctttcc gttttcaggc ggcgtgccgc ttccgcgtga atccagcttt
     7861 caaatttatc tttcaggctg cctgaaagct cgttgccgct gcggtagccc gcaatatcat
     7921 caataaaaaa cagcgtcagc ggcttgattt tgggctgtgg cgcgcgttct gccaaaagtg
     7981 cgcgttccag cttgaaatgt tcggcaaccg ccctctgcat catcgcatcc tgcaccgttt
     8041 gcgaatagga ataagggttg atgacggcgc ccgttttcaa ctccaagccg ttgcttaaca
     8101 ccaccacggt tttattcatt ttgtcgattt tcaaatctga aacagcagga tggattttcg
     8161 ccaaatcttc gccttttgcc agtttgaacg tctgcttttt gtccttttcg tttaattcaa
     8221 atttcgcttc tttgccgccc gacgacacca gttttaccgc cgcatccatg ccgccctgca
     8281 tttcttcctg aaacacgcgc acgcctttga ccagcccgtc gttaaacgcg tctactgccg
     8341 tcaaacggta aagcaagttg taatattcat cgttaaatgt cgcaccgtag cgcaaaatat
     8401 attgcggttt taagcgtttg atattgcccc atgttttcgc gctctcccgg gtcgggaatt
     8461 tatgcggttc gtccacaatc acaaacgggc gcacggcggc caatgcatca acgggattgt
     8521 caaacaaatc tttcaatgcc ttgtcgcccg tatcgttcat ggacgacgaa ttaaccatgc
     8581 ccgcgttaat cagcagcaca tggatttcct ttttgttttc cgctttggca aattgctcaa
     8641 tcgttatggg cgcattggac tttttgccct tattcttttt cgcgctttcc accacatagg
     8701 ttttcaggcg cacgccttca taatcgccgc cgaaatcctg ttcaaaatgc tctgccaaag
     8761 ccttgctttg caaaaactgc cgcgttcccg ccttaatgga caaagtcggc acgaccacga
     8821 taaatttgaa cacgcccagc caacggtgca gctcgaacat ggtttgtgtg taggtatagg
     8881 ttttgcccgt gcccgtttcc atggaaatat caaggatatt ttggtcgtcc gaacggtcgg
     8941 ggaatcggcc gtctatgccg ttttggcttt gcactttcag gatattgtct gcgtattgtt
     9001 ttgcagcaaa caaaagttcg ggattttcgt ctgccgcccg atatttgggc gttgccccgt
     9061 caaacacgcc caaaaccgcc gaaaccgccc gcatttggtg cggctggttt ttctcgtaat
     9121 taaaaccact cataaacttt ctccgtcaaa ccctgataat cacgtttaac tcaatttctt
     9181 ttttattggc ataaccgcga accgcctggt caagttcgtg ctgcatggcg cttgccatat
     9241 tgctgccgaa tacaatcacg cggttgggat tgaaatccgc atcgtcgtcc agcttgcgga
     9301 taaacgccaa caaatcggcg gaagtaaaac cggcattcat cagatacagc cgtttttcgc
     9361 acagatacgc cgtgtaagcc cctaaccgca caggctcaac cggcgtggtc agtgccgccc
     9421 cgtcatacag cgtccaggtg gtcagaagcg tttgcagctg ttcttcgctt aattcatcgt
     9481 taagcggcaa atccggttgt tcgggcgaaa aatccttgtc cggatgctgc ctgaaattgt
     9541 ctgccgtttg aaagattttg aagcccgaat cgcccgtgta atcgggatgt tcgacgcgga
     9601 ttttggcggc ggctttttct atgcgggctt tggtgatgtc gaagatggtc gggtagcctg
     9661 ctttacgggc ttcggatttt tcagcggttt tttcgggaag ctgtacacag atatagcggc
     9721 ggttaccgtt ttgtccttcg gcgttaagct gcatcacggc gtgggcggtt gtgccgctgc
     9781 ctgcgaagaa gtctaggatt aggtcagttt gatttccctt gaaagttgca gaaagaacta
     9841 atcttttcaa taaatctaat ggttttggtg tttcaaaagg agaataacct tttccagttt
     9901 caaacaactc ttctaattca cgaataccat ctttagtaag atttttactt atatttccaa
     9961 tatttaagat gctatgaaat ttggaaaaat catcggatac ttttctaagt tttccaataa
    10021 ttgttttccc ataagacttc ggaattaaga tatattcatt attttcaata tctttatcaa
    10081 ttttgttttt aaactcaatt ccttttattt caataatatc ttcgtaatgc aagttcccat
    10141 atttgccaaa ctgttcgcga acggcatctt cctgtatcca atataattca tcattgatta
    10201 caattttttt gccgcgtata tcttttggtc tttttagatt gtcaaaatga gtaatatctt
    10261 tcgcataaac taaaacagtt tcatgcccat ttacaacata ttttgcatta ccaccacctt
    10321 ctgatgtatt aacaattaaa tctttaataa aattcccttc cccaaacact tcatcacaca
    10381 acaacttcaa ctgcgccgct tcgttatcgt caatcgagat aaaaatcacg ccgtcgtcct
    10441 ttaacagttc gcgggcgata tacaggcgcg gatacataaa ggtcaaccat gcactgtgcg
    10501 agtttgagcc tttgtcggtg aaatctaaaa tccgcgcggc ttcgtcttcg tcaatattgg
    10561 ctaagcaggc aagttcggct ggtgtgaatt tgcggtcgtc ctgatagaca aagccgtctg
    10621 atccggtgtt gtagggcggg tcgatgtaaa tcatcttcac gctgtttgtg taggcgtttt
    10681 ttaagtgttt caacacttct agattgtcgc cacgaatcag taggttttgg ctgcctgcat
    10741 tttcgggttt ggcgttgtgc gtcttgtctt cacttatcag ggtttcgggc ggcaggttgc
    10801 gaagcaggcg agcatatgat ttgcccagcc agttcatttc gtaaaattcg cgtccgatgt
    10861 cggtctgtgg cgcaatttcg gcttgtaatc tgtcgataag gaaatttccg tctgcgtcaa
    10921 aacaggcggg aaacagtttt ttgagctgtt cgagttgggt agagttggcg gtaatgccgt
    10981 ctgaagtgta gattgcctcg gtgttcaccc cggctgtgtc gattagatca ggg
//
LOCUS       DAWITQ010000055        11019 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.055, whole genome shotgun sequence.
ACCESSION   DAWITQ010000055 DAWITQ010000000
VERSION     DAWITQ010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11019)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11019)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11019
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.055"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(56..169)
                     /locus_tag="WIX18_001106"
     CDS             complement(56..169)
                     /locus_tag="WIX18_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEZ5238221.1"
                     /translation="MSQKAAADQLNLPDCSILLQWLRLYHLNGINGLKPKP"
     gene            1241..1678
                     /locus_tag="WIX18_001107"
     CDS             1241..1678
                     /locus_tag="WIX18_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VapD"
                     /protein_id="HEZ5238222.1"
                     /translation="MSRYLITFDMDTNCLKDNYHGNNYTNAYSDIKTILARHGFENIQ
                     GSVYLGREGISEAHGTIAIQELTARFDWFYSCISNIKFYRLESDLNAQFIADGVYQAK
                     QAFLQRVEQLRISLTEAGLSDEQINQVLEKQKFELESPNLKLN"
     gene            complement(3213..3575)
                     /locus_tag="WIX18_001108"
     CDS             complement(3213..3575)
                     /locus_tag="WIX18_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ5238223.1"
                     /translation="MKAARRQLYYTFANRIAEQSRIICIKKLNLLNLQCIQIEVNKLH
                     QKIVAPSPLLHTLKEGVAKNGVHIEEIKANATSQSCYSCGRLNKRIGVAATRTNMVCE
                     GFGRHYDTDENASSNIRK"
     gene            3996..5360
                     /locus_tag="WIX18_001109"
     CDS             3996..5360
                     /locus_tag="WIX18_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEZ5238224.1"
                     /translation="MQHLTERMTQIAKLLNSSANNPDIDIPDFLTEIKDYSEFSVTDE
                     NGTYLHWDKFRQIHTEDTRMKWRAVKESRKKIQKPIDFPFEHQFWFCIPDSLQARLHL
                     IDKSCGSSIGTSSLGGFGRSEQNRFLLKSLIMEEAITSAQLEGAATTRKVAKDMLKSQ
                     RKPKTKDEIMIVNNYHLMKKAVELKNTPLSVEMILDLHRIATSNAIENKADPGQFRRD
                     DEIFIADNDGNSLYQPPPHGQVHTLMEAVCTFANNTYDGVENPFIHPVVQAIILHFLI
                     GYIHPFGDGNGRIARALFYWFMLKNSYWLFEYISISRLLKNAPAQYAKSYLYAETDDS
                     DLTYFIYYQCDIIKRAVADLEHYISDKQKHQQEFKAAIAQYTEKIGKLNQRQIGILQK
                     AVEESGKIFTAQEIANQYGISLNTARSDLSKLGEYRFLVPFKSGNALEYVAPQDLLER
                     LEKK"
     gene            5762..6226
                     /locus_tag="WIX18_001110"
     CDS             5762..6226
                     /locus_tag="WIX18_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238225.1"
                     /translation="MLHIPPTEPDRYVSSIVALNVHSSNGTGDWHSAAALNDDAYPQD
                     FYIYGKDQTRSTLHLLGNVGVIDGTNRFNEMGYYPENIPVWLADHPRACVDYLYTAVL
                     QTGSIGRVILDDWFPSDEDKQSVYDLLNQIEPHLNTQEWGNLQLWKRKNPIM"
     gene            6353..7642
                     /locus_tag="WIX18_001111"
     CDS             6353..7642
                     /locus_tag="WIX18_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HipA family
                     toxin"
                     /protein_id="HEZ5238226.1"
                     /translation="MMNSILTVSENRMRKPRITHLDVWANDERIGTLEKGAMYRFTYD
                     NPGSPLLGLHYQDRGKVYISNNMPHIFAQYFPEGFLDAHITSKYAFHDAPFEDNEMLR
                     LAILGRETLGRIHVRCNDPLFNEWIDGLEMKNPRILTERDLLGINARQVFQQYMAEIF
                     HHGRFVSVSGIQQKMSLDAISRNTKQTASYIAKGFDASEYPCLAANEFLCMQTIKQAG
                     IPVAQTSLSEDSSVLLVRRFDVSEQEYFLGMEDFTSLRQYSAEDKYKGSYAAIAQIIR
                     QISGRPDEDLIHFFNQLAASCILKNGDAHLKNFSVLYHDEYDVRLAPTYDVLDTSIYR
                     VGTQGIFDAYDDTLALNLTNHGKKTYPSKNTLLDFAEKYCDLGREDASFMIDTIVQAK
                     EQVLVKYSDVLRENEWLAQKWHFIPDENEEGLPFTFR"
     gene            complement(7967..9754)
                     /locus_tag="WIX18_001112"
     CDS             complement(7967..9754)
                     /locus_tag="WIX18_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HEZ5238227.1"
                     /translation="MKLPLSYLPNIRFLSWCCLLAGIIAPATLLASPNPAEIRMQQDI
                     QQRQREEQLRQTMQPESDVRLHQKNTGETVNQLMGDDSSQPCFAINEVVLEGEHHARF
                     QFALKRALRETGFQAGKCLHAGNINQIMSLAQNALIGRGYTTTRILAAPQDLNSGKLQ
                     LTLIPSYLRSIRIDRSNDDQTHAGRIAAFQNKFPTRSNDLLNLRDLEQGLENLKRLPT
                     AEADLQIVPVEGEPNQSDVVVQWRQRLLPYRVSVGMDNSGSEATGKYQGNITFSADNP
                     LGLSDMFYVNYGRSIGGTPDEESFDGHRKEGGSNNYAVHYSAPFGKWTWAFNHNGYRY
                     HQAVSGLSEVYDYNGKSYNTDFGFNRLLYRDAKRKTYLGVKLWTRETKSYIDDAELTV
                     QRRKTAGWLAELSHKEYIGRSTADFKLKYKRGTGMKDALRAPEEAFGEGTSRMKIWTA
                     SADVNTPFQIGKQLFAYDTSVHAQWNKTPLTSQDKLAIGGHHTVRGFDGEMSLSAERG
                     WYWRNDLSWQFKPGHQLYLGADVGHVSGQSAKWLLGQTLAGTAIGIRGQIKLGGNLHY
                     NIFTGRALKKPEFFQSRKWASGFQVGYTF"
     gene            complement(9809..10267)
                     /locus_tag="WIX18_001113"
     CDS             complement(9809..10267)
                     /locus_tag="WIX18_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-activating lysine-acyltransferase"
                     /protein_id="HEZ5238228.1"
                     /translation="MPIISTLNILSPKLYPSEPYNESEALGAITWLWYQSPTHRQVPI
                     VEMMTYILPVLKNGQFALFCKGTQPIGYISWAYFDEVAQAHYLESDRHLRDNSDWNCG
                     DNIWLIQWFAPFGHSHQMRSAVRQLFPSTTVRALYHKGSDKGLRILTFKT"
     gene            complement(10433..10780)
                     /locus_tag="WIX18_001114"
     CDS             complement(10433..10780)
                     /locus_tag="WIX18_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238229.1"
                     /translation="MEKNMKQILFKYFMLITCVFGLSSCGYLLSFGQLMFDGSCADWN
                     CSKPTPRWRKAVDDCENRNLEIIKQRFGYKDYAEVIFSEVGQQIQIPYQCRQSNGGYD
                     IRKDKQYGHLFVQ"
     gene            complement(10749..>11019)
                     /locus_tag="WIX18_001115"
     CDS             complement(10749..>11019)
                     /locus_tag="WIX18_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hemagglutinin"
                     /protein_id="HEZ5238230.1"
                     /translation="NNTTQGACKGLCYSHSSYFAEVPEQYQRDENGNIKMENGKPVET
                     ENWEDYTKKWGIPKTGADGKYINHAIPKLVNPNNPNGEKYETNPF"
BASE COUNT         3201 a         2335 c         2289 g         3194 t
ORIGIN      
        1 cggctttttc gtttccggcg gatgctgttt tttcacgggc tttcttcctt tgggtttagg
       61 gtttgggctt taaaccgtta ataccattca aatggtagag gcgcaaccat tgcagcaaga
      121 tggagcagtc gggcaaattc agttggtctg cggcagcttt ttgggacatt ccctaccccg
      181 tcaccaggcg gattgcctca agtttgtatt cgaccgaata ttttgtcgta tgctttctac
      241 gtttgatgcc actctctccg tgtaatctgt attttgtcac ccatctgcgt accaatgaat
      301 cggaaataga aagatggtct gctgttccct gccaaatagt attgaacgac ggcaagtcgg
      361 aattcatctg aatattttgc cataaaaaac tgcaccccct aaagtcggta aggtgtccaa
      421 cttttggggt gcagttcaga agcggtcttt ttttgcctgc cggttttgaa tcatcctccg
      481 tgtatattcc cttgacgaaa aaaatgatga tattacggat accaaaacta aggtcgtatc
      541 cgccccctac tctccctaag caaagagatg aaacagcgta tcggctccct gccggttgaa
      601 ttttccgaaa aaacgcgacg taaccagcat caacatatat aagaacagca caaatagcat
      661 caatacatca ggcaacgaaa atgcagaata atgcacttaa tggtgtttgg atatctgttg
      721 ttttgtgctg ttagtaattc ttctttctgt gtttacagtt tagcagttgt acagttttac
      781 agtaatgttt aaacaatgac tgatttattt taaatgcaga tattgtagag gataaaaatg
      841 gccaaagtcc tttcagtaac atttttgatt ttttagcgag ccttctcatt tccccggcga
      901 gatcggcaat ggcagcggta ctttggccgc cgatatgctt aagttcagta accttacgcc
      961 accaaaaccc ttgctagcta agggttaaac agctcacttg aaatctactt aagtctaatc
     1021 taaactatcc aatatggata gatttttaaa catagggcaa gcagcaaaat tattgtagct
     1081 gaaagcacaa tcactcgctg gtggtctcaa acacgtgccg actacctcgc cgaaaacact
     1141 atcagccgcg ataaaccgtg ggaaaagctc gttatcagcc gccgcacttg gtactatcgc
     1201 gggaaaccga tgctgtctga aacgcaacag gagaaaaata atgagccgtt acctgattac
     1261 ctttgatatg gataccaact gcctgaaaga caattaccac ggaaataact ataccaatgc
     1321 ctactccgat attaaaacca tcttggctag acatggattt gagaacattc agggcagtgt
     1381 ttatctaggc cgtgaaggca tcagtgaagc acacggaaca atagccattc aggaactgac
     1441 cgctcggttt gattggtttt actcctgtat ttcaaacatt aagttttacc gccttgaaag
     1501 tgatttgaac gcacaattta tcgctgatgg tgtgtatcaa gccaaacagg ctttccttca
     1561 acgtgttgaa caacttcgta tatccctaac agaagctgga ttgtctgatg agcaaatcaa
     1621 tcaggttctg gaaaaacaga aatttgaatt ggaaagtcct aacctgaaat taaattaacc
     1681 tcctttactc accaacatcc gccgcagctc tgtcagtttt tggcgcgctg cggcgatttc
     1741 tgtgcgtttt agagcttcgg gtagggtgtg aaacaactca ctcgaaattt acttaagtct
     1801 aatctaaact atccaagcag taattagtac aaaaaaggca aacttatttt aggagcttaa
     1861 aattgcagcc gcgataaacc gtgggagagt ctcggcattt cccgcgccac ttggtacaaa
     1921 cgtggcaaac cgatgccgtc tgaaaccgta caacaggaga caaaataatg cttgctcaaa
     1981 tcgaactcac accctgccag ctaatggttt acgtaactta aggttactgg atttacgcac
     2041 taaggttact gaacttaagc atatcggcgg ccaaagtacc gctgccattg ccgatctcgc
     2101 cggggaaatg agaaggctcg ctaaaaaatc aaaaatgtta ctgaaaggac tttggccatt
     2161 tttatcctct acaatatctg catttaaaat aaatcagtca ttgtttaaac attactgtaa
     2221 aactgtacaa ctgctaaact gtaaacacag aaagaagaat tactaacagc acaaaacaac
     2281 agatatccaa acaccattaa gtgcattatt ctgcattttc gttgcctgat gtattgatgc
     2341 tatttgtgct gttcttatat atgttgatgc tggttacgtc gcgttttttc ggaaaattca
     2401 accggcaggg agccgatacg ctgtttcatc tctttgctta gggagagtag gggggcggat
     2461 acgaccttag ttttggtatc cgtaatatca tcattttttt cgtcaaggga gtatatcgac
     2521 tctagaagac aggtattaga tactgccttt tcttacaaga gtgatggtag gatggttctc
     2581 ttcaagtcaa tcaaacagga aagtatttct tttctgtctg aagatttgaa aaaggactgg
     2641 atgtttcaca aggttaaaac tggggaaaaa gatggatatg gttcagatga aatgctgagc
     2701 gtaccccgtg tctatttgga aatgatgtcg cggaaaacgg gagtccccta ctccagtatt
     2761 ctttaaagtc taagtagaag acttcttcgt cggtcttttt ttgttgtttg gtttgcatgg
     2821 agtaaaactg tacaactgtt gaagcataaa accagcaaga aggtaaaaaa gaaagaagca
     2881 gttctttgga ttttagatgt taccgcaatt agtttccttt cctaaaattt gtttaaatta
     2941 tttgcaatat taatataaac gagatattaa tgatgagaaa tcaaaaaggc atactaaata
     3001 caatttgtac aaaataattg cagtatttaa aaatgttgat tcgtatatga aaagttaaaa
     3061 atgccaaaat gtacagttgc taaactgtaa aactgctaaa gcaacaaaac ataaaaagga
     3121 atgcagggat gcaatcacta catcttttta ttccgtaagc atttatgact ttacggtcaa
     3181 ctgctactct atgtgcctag cttttcagct ccctattttc gaatattgga cgaggcattt
     3241 tcatcagtgt cgtaatgccg gccgaaaccc tcacaaacca tattggttct tgtggcagca
     3301 acacctatcc gtttgttcaa gcgaccacaa gagtaacatg attggctggt ggcattggct
     3361 ttaatctctt cgatatgaac tccattttta gctacacctt ctttcagcgt atgcaacagt
     3421 ggggatgggg caactatctt ctggtggagt ttgttgactt caatctgtat gcactgtagg
     3481 ttgagcagat tcagtttttt gatacagatt atccggcttt gttcggcaat tctgttggcg
     3541 aacgtatagt agagctgtcg tcttgccgct ttcaatttgc ggtaggtatt ttaccattcc
     3601 atacgtagcc gctcggtacg tttgagccaa atggtatctt cgccatttgt accaattggt
     3661 ttttacatta ggctgtgttt tagtaattta ttaatttcaa ttatttgcaa gggaaaagac
     3721 aattattttc cggttaggaa taaacctatc ctgttgaata ccttaaagcc aaatacgcct
     3781 atcaacacca tattaaaaca cagccttttt taatatagta gacacaatct ttccctattt
     3841 atgaaggtga tcgcttcttt ctgattcgta ttttaatgct tcctattttt ataaaaattg
     3901 actagaatag ctcaattatt aaaaattgcg cgattttggt atttatcatg aaaatttcca
     3961 gacctctgga atttaccctg ttgcaacagg aatatatgca gcatctgact gaaagaatga
     4021 ctcaaattgc caagctgctg aattcttccg caaacaatcc tgatatagac attcccgatt
     4081 ttcttactga aatcaaagat tattcagaat tttccgtgac agatgaaaat ggaacctacc
     4141 tgcattggga caaattccgc cagattcaca cggaagatac gcggatgaaa tggcgcgccg
     4201 ttaaggaaag ccgcaaaaaa atccaaaaac caattgattt cccgtttgaa catcagtttt
     4261 ggttctgcat tcccgactct ttgcaggcac ggcttcattt gattgacaaa agctgcggca
     4321 gttctatcgg cacgtctagc ttgggtggct tcggcagaag cgagcaaaac agattcttgc
     4381 tcaagtctct gattatggaa gaagcgatta catccgccca actggaaggt gcggctacca
     4441 cgcgtaaagt ggccaaggat atgctcaaat cgcagcgtaa acccaaaaca aaagacgaaa
     4501 tcatgatagt gaacaactat cacttgatga aaaaagcggt agaattgaaa aatacgccgt
     4561 taagtgttga aatgattttg gatttgcacc gcattgctac cagcaacgct attgaaaaca
     4621 aggccgaccc cgggcaattc aggcgggacg acgaaatctt tatcgccgat aacgacggca
     4681 acagcctgta ccaaccaccg ccacacgggc aggttcatac gctgatggaa gcggtatgca
     4741 cgtttgccaa caacacttat gacggcgtgg aaaatccgtt tatccatccg gttgtccaag
     4801 ctatcatcct gcatttcctg attggctaca tccatccgtt cggagatggc aacgggcgga
     4861 tagcgcgggc tttgttctat tggtttatgc tcaaaaacag ctactggctg tttgaataca
     4921 tatcaatcag ccgtcttctg aaaaacgctc cggcccaata cgccaaatcc tatttgtatg
     4981 cggaaactga cgattcagat ttaacctatt tcatctatta ccaatgcgat attatcaagc
     5041 gggcggttgc cgatttggag cactacattt ccgacaaaca aaaacaccaa caggaattca
     5101 aagcagcgat tgcccaatat actgaaaaga taggaaagtt gaaccaacgg caaattggta
     5161 tcctgcaaaa agcagtggaa gaaagcggaa aaatctttac tgcacaagaa attgccaacc
     5221 aatacggcat ctccctgaat actgcccgta gcgatttgag caaactggga gaatatagat
     5281 tcctagtgcc gttcaaatca ggaaatgctt tagagtatgt tgctcctcag gatttattgg
     5341 aaaggttaga aaaaaaatag tttgctagac taaaatgcag ctttaaccga gtcaaaatca
     5401 atacagtccg caccttcaaa aagaagctgc ggactgcttg ctttttgctc tacaaatgat
     5461 ctttgtagct gatttaacca agattgtagc aattttgctt tccgagcaag cagggttaga
     5521 aaattcgata cttttaatta ttggctgtgt tttaatatga tgttgatagg cgtgtttggc
     5581 tttaaggtat tcaacaggat aggtttattc ctaaccggaa aataattgtc ttttcccttg
     5641 caagtaattg aaatcaacag tttactaaaa cacagcctta cattattggg gtaactatcc
     5701 tgtaaaatat gtcctaaaac gtggaaacca cttttgctct gctaaatttt aaggaatctt
     5761 tatgttacat atacccccaa cggaacctga tcgatatgtt agcagtattg tagccttaaa
     5821 cgtgcatagt tctaacggta caggcgattg gcacagtgca gcagccctta atgatgatgc
     5881 ttacccccaa gatttctata tttatggcaa agatcaaaca cgtagcacgt tacatttgct
     5941 tggtaacgtt ggtgtgattg atggaacaaa ccgcttcaat gagatgggct attatcctga
     6001 aaacatccca gtttggctcg cagatcaccc ccgtgcttgc gtggattatc tttacacagc
     6061 agtgttacaa actggctcaa tcggtcgggt gattttagat gattggtttc caagcgatga
     6121 agacaagcaa tcagtttatg acttacttaa ccaaatcgaa ccgcacttga atactcaaga
     6181 atgggggaat ttacagctat ggaaacgcaa aaacccaata atgtaatgct aaccgaacga
     6241 gataaaaggc acgagaagcg gtattgctga atttcatccg caatacgcca tgtacaatta
     6301 aatcagcaga tgtgtctaaa cgtcccgctg ttcccgtttg aaagaatttc tcatgatgaa
     6361 ttctatcctc accgtatccg aaaatcgtat gcgtaaaccc agaatcaccc atttggatgt
     6421 ttgggcaaac gatgaaagaa tcggtacttt ggaaaagggg gcaatgtacc gtttcacata
     6481 tgacaacccc ggttctccat tgttgggttt gcactatcag gataggggta aagtatatat
     6541 cagcaacaac atgccgcata tctttgcaca gtattttccg gaaggctttt tggatgcaca
     6601 catcacaagc aaatatgctt ttcatgatgc gccttttgaa gacaatgaga tgctgcgctt
     6661 ggcaattctg ggcagagaga ctttgggtcg gatacatgtg cgctgtaatg acccgctttt
     6721 taatgaatgg attgacgggt tggagatgaa aaatccaaga atattgactg aacgggattt
     6781 gctgggcata aatgcccgac aggtttttca gcaatatatg gcagaaatct tccatcacgg
     6841 tcgtttcgtc agtgtatccg ggatacagca gaagatgtcc ttagatgcca tcagcagaaa
     6901 taccaagcaa actgcctcat atattgccaa aggttttgat gcatccgaat atccttgctt
     6961 ggctgccaat gaatttttat gcatgcagac catcaaacaa gcaggtattc cggttgcaca
     7021 aaccagcctg tcggaagatt catcagtctt attggtacgt cggtttgatg tcagtgaaca
     7081 ggagtatttc ttaggcatgg aagactttac cagtctgcgt cagtattcag cagaagataa
     7141 atataaaggc agttatgcgg ctattgcaca gattatccga cagatatccg gcaggcccga
     7201 tgaagattta atccattttt ttaaccagct tgccgccagt tgcatattga aaaacgggga
     7261 tgcacacctt aaaaattttt cagtactcta tcatgacgaa tacgatgtac gtcttgcacc
     7321 tacctatgat gtattggata catcaatata cagggttgga acacaaggaa tttttgatgc
     7381 ttatgacgat acgctggcat taaacctgac taaccacggt aagaaaacat atccttccaa
     7441 gaatacattg ttggattttg ctgagaaata ttgcgatttg ggaagagaag atgcatcctt
     7501 tatgatagat acaatcgttc aagctaaaga acaggttctt gttaaatact cggatgtatt
     7561 gcgtgagaat gaatggttgg cgcagaagtg gcattttatc ccggatgaaa atgaagaagg
     7621 tctaccgttt acattccggt agctgccgct gtcagagatg gccggtcgac ttttaccctg
     7681 aaaatcactt catcttatgg tgtttgaaac cgagaaatta gaagaatcgt attcggtagg
     7741 agatatactg ggaagattgg aaaactggta aatcactcta ttgattgagt tggcggccta
     7801 tatgtttaat gtaggcaaac gagaaggaat catgtatttc atgattcctt cttaaattcc
     7861 tgtgtcaatc taatatcaaa acacagccat ctcttaccat aatcatgata ggtgttttat
     7921 tatgaaaagc tatatctata gttaccgttg atttgactat gccgttttaa aacgtatagc
     7981 ctacctgaaa accgcttgcc catttccttg attggaaaaa ttcgggcttt ttcaatgcgc
     8041 ggccggtaaa tatattgtaa tgcaggttgc cgccaagctt tatctgcccg cgtatcccaa
     8101 ttgctgtgcc ggctagagtt tggcccaata accatttggc ggattgtcct gaaacatgtc
     8161 ctacatcagc cccaagataa agctgatggc ctggtttaaa ttgccagctc aaatcgttgc
     8221 gccaatacca tccccgctcg gcagacaaac tcatttcacc gtcgaagcca cgcacggtgt
     8281 ggtgtccacc gatagccagt ttgtcttgcg atgttagcgg ggttttgttc cattgtgcat
     8341 gaacggatgt gtcataggca aatagctgtt taccgatttg aaaaggagta tttacatcag
     8401 ccgatgccgt ccaaattttc atacgtgacg tgccttctcc aaaggcttct tcaggcgcgc
     8461 gcagagcatc tttcatgccg gtgccgcgtt tatatttcaa cttaaaatct gccgtactgc
     8521 ggccgatata ttctttgtgg gaaagttctg ccaaccaacc cgcagtttta cgccgttgta
     8581 cagtcagttc ggcatcatca atgtaacttt ttgtttccct cgtccacagt tttacaccaa
     8641 gataggtttt gcgtttggca tcacgataca acaggcggtt gaagccgaaa tcagtattgt
     8701 aactttttcc attatagtca tagacttccg ataatccgga aaccgcctga tggtaacggt
     8761 agccattgtg attgaatgcc catgtccatt taccgaaagg ggctgaataa tgtacggcgt
     8821 aattgtttga tccgccttct ttgcgatggc cgtcaaaact ttcctcatcg ggcgtaccgc
     8881 caattgaacg tccataattt acatagaaca tatcactcag tcccaaagga ttgtcggcag
     8941 agaaagtgat atttccttgg tattttcctg tcgcctcact acccgaatta tccatcccca
     9001 cactcacacg gtagggcagc agacgttgcc gccattgcac cacgacatca ctttggtttg
     9061 gttctccctc tacgggaacg atttggagat cggcttccgc agtcgggaga cgtttgagat
     9121 tttccagtcc ttgttccaaa tcacgcagat tcaacagatc gttcgagcgg gtgggaaatt
     9181 tgttctggaa tgctgcaata cgtcctgcat gggtttgatc atcgttagac cgatcgattc
     9241 gtatggagcg cagatagctc ggtatcaggg ttaattgaag cttgccacta ttcaaatcct
     9301 gtggcgcagc caagatacgg gtcgtggtat atcccctgcc gatcaaagca ttttgtgcta
     9361 aggacatgat ttgattaatg ttgcccgcat gcagacactt gccagcctga aaacccgttt
     9421 cgcgcaaggc acgttttagg gcaaactgaa accgagcatg gtgttcgcct tccaacacca
     9481 cttcgttaat ggcaaaacac ggttggctgc tgtcatcgcc catcaactga ttaaccgttt
     9541 ctcccgtgtt tttttgatgc aaacgcacat cgctttcagg ctgcatggtt tggcgcaact
     9601 gctcttcgcg ttggcgttgc tgaatatctt gctgcatacg gatttcggca gggttggggg
     9661 aggccaacaa agtagcagga gcaatgatac ctgccaataa gcagcaccaa gacaaaaagc
     9721 gaatattagg caaataggat aaaggaagtt tcatggcatg gtcgcaaaat caataaaatc
     9781 atcaatgggc attcaataca cgattgcatc aagttttaaa agttaaaatt ctcaaaccct
     9841 tatcgctccc tttatgatac aaggcgcgta ctgtcgtact aggaaataac tggcgcacag
     9901 ctgagcgcat ttgatgactg tgtccaaatg gcgcaaacca ttgaatcagc caaatattgt
     9961 cgccacagtt ccaatcgctg ttgtcacgca aatggcggtc agattctaaa taatgcgcct
    10021 gcgccacttc atcaaaataa gcccatgaga tataaccgat tggttgggta cccttgcaaa
    10081 acaaagcgaa ctgcccgttt tttaacacag gcaatatata cgtcatcatc tccacaatag
    10141 gtacttggcg atgcgtaggc gactgatacc atagccaagt gatggcaccg agtgcttcgc
    10201 tttcgttata tggctcactg ggatagagct tgggtgagag gatgtttagg gttgagatga
    10261 tgggcatatt ttaagttagg gttggtgttg gttaaaacaa aaaatggttt cagcctgaaa
    10321 tgaaacattt cacgttaaaa catagcttta gcatacgaga ctgaattgta gggggcaata
    10381 agcaacgacc ctaccattca acaattctcg ttaattgcac aggttacgct ggttattgca
    10441 caaacaaatg cccatactgt ttatctttac gaatatcata accaccatta ctttgcctac
    10501 attgataagg tatttgaatt tgttgtccaa cttcactaaa aatcacctct gcgtaatctt
    10561 tatacccaaa tctctgttta ataatctcca agtttctatt ctcacagtca tcaactgcct
    10621 ttctccatct tggcgtaggt ttagaacaat tccaatctgc acaactgcca tcaaacatta
    10681 actgcccaaa tgataataaa taaccacaac tgcttaatcc aaaaacacaa gtaattagca
    10741 taaaatattt aaaaaggatt tgtttcatat ttttctccat tcggattatt gggattgact
    10801 aattttggaa tagcatgatt tatatattta ccatcagcac ctgttttagg gattccccat
    10861 ttttttgtgt aatcttccca gttttctgtt tcaacaggtt tcccattttc cattttaata
    10921 ttcccatttt catctctttg atactgctca ggcacttccg caaaataact gctatgcgaa
    10981 tagcacaacc ccttacatgc accttgtgtg gtgttattg
//
LOCUS       DAWITQ010000056        10895 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.056, whole genome shotgun sequence.
ACCESSION   DAWITQ010000056 DAWITQ010000000
VERSION     DAWITQ010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10895)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10895)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10895
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.056"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(140..1285)
                     /gene="dapE"
                     /locus_tag="WIX18_001116"
     CDS             complement(140..1285)
                     /gene="dapE"
                     /locus_tag="WIX18_001116"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HEZ5238231.1"
                     /translation="MTETQSLELAKELISRPSVTPDDRDCQKLLAERLHKIGFAAEEL
                     HFGDTKNIWLRRGTKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADM
                     KTSIACFVTACERFVAEHPDHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYC
                     IVGEPTAVDKLGDMIKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQ
                     EVWDEGNKYFPPTSFQISNINGGTGATNVIPGELSVKFNFRFSTESTEAGLKQRVHAI
                     LDKHGVQYDLQWSCSGQPFLTHAGKLTDVARAAIAEICGVETELSTTGGTSDGRFIKA
                     IAKELIELGPSNATIHQINENVRLNDIPKLSAVYEGILARLLAGNAV"
     gene            complement(1398..2018)
                     /locus_tag="WIX18_001117"
     CDS             complement(1398..2018)
                     /locus_tag="WIX18_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate 1-dehydrogenase family
                     protein"
                     /protein_id="HEZ5238232.1"
                     /translation="MLTSKSCDLFNIPFFQFSQLKKYQPESIPQIKADYKENWQVWQQ
                     LIQQVAAELGAPFAPPHIERWCNGWQVRAHFFAYFKYEQYKNSAAILSILLNRRRLSV
                     SLDWHCYKADVSPIALPEYNRWLDDFDTDKYAAFDMWHGAESEYDDYRTVAQQSESDR
                     KLQNDEDFFCIGKHIERDDLGKQDVAKWIAETVEDLLPLYEACHGK"
     gene            complement(2043..2552)
                     /locus_tag="WIX18_001118"
     CDS             complement(2043..2552)
                     /locus_tag="WIX18_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEZ5238233.1"
                     /translation="MNPFETKSVTFAEPIEMLYACHGKVRRFCGQVAMLSDYIAENGC
                     NQIVLQTIRQITRYFNVAAPLHHEDEEEDFFPLLLQYAPQAREGVDELLRQHIGLHDN
                     WAAVSAEFAKLEADNAYVPDAEAFKRFVAGYDVHLAIEEPLFDMGNTFIPKEKLTEIG
                     EIMAARRRK"
     gene            complement(2647..3198)
                     /gene="azu"
                     /locus_tag="WIX18_001119"
     CDS             complement(2647..3198)
                     /gene="azu"
                     /locus_tag="WIX18_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="azurin"
                     /protein_id="HEZ5238234.1"
                     /translation="MKAYLALISAAVIGLAACSQEPAAPAAEATPAAEAPASEAPAAE
                     AAPADAAEAPAAGNCAATVESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKASMGH
                     NLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEEASLTLDPAKLADG
                     EYKFACTFPGHGALMNGKVTLVD"
     gene            complement(3479..3901)
                     /locus_tag="WIX18_001120"
     CDS             complement(3479..3901)
                     /locus_tag="WIX18_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF721 domain-containing protein"
                     /protein_id="HEZ5238235.1"
                     /translation="MNLEQLGRRDALLSGLLKQAGQWRRLDAAVKKLLPANLHPHFQT
                     ACIEDGRLVLLAANNMAASRLKMIAPSVLPQLAGLDVSIRSVSVRLVPKPEKPPKTNT
                     LHLSKAALESFGSAAAKLEKRHPELAEALANLVRRHGA"
     gene            4033..6783
                     /gene="secA"
                     /locus_tag="WIX18_001121"
     CDS             4033..6783
                     /gene="secA"
                     /locus_tag="WIX18_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEZ5238236.1"
                     /translation="MLTNIAKKIFGSRNDRLLKQYRKSVARINALEEQMQALSDADLQ
                     AKTAEFKQRLADGQTLDGILPEAFAVCREASRRTLGMRHFDVQLIGGMVLHDGKIAEM
                     RTGEGKTLVATLAVYLNALAGKGVHVVTVNDYLASRDAGIMEPLYNFLGLTVGVIISD
                     MQPFDRQNAYAADITYGTNNEFGFDYLRDNMVTDQYDKVQRELNFAVVDEVDSILIDE
                     ARTPLIISGQADDNIQLYQIMNTVPPHLVRQETEEGEGDYWVDEKAHQVILSEAGHEH
                     AEQILTQMGLLAENDSLYSAANIALMHHLMAALRAHSLFHKDQHYVIQDGEIVIVDEF
                     TGRLMSGRRWSEGLHQAVEAKEGVEIKRENQTLASITFQNYFRLYTKLSGMTGTADTE
                     AFEFQSIYNLETVIIPTNRPVQRKDFNDQIFRSAEEKFEAVVKDIEECHKRGQPVLVG
                     TTSIENSELVSHLLQKAGLPHNVLNAKEHEREALIVAQAGKVGAITVATNMAGRGTDI
                     VLGGNLKHQTDAIRADETLSDEEKQAQIAALENGWQAEHDKVMEAGGLHIIGTERHES
                     RRIDNQLRGRSGRQGDPGSSRFYLSFEDPLLRLFALDRAAAILNRLAPERGVAIEHNL
                     LTRQIEGAQRKVEGRNFDMRKQVLEYDDVANEQRKVIYSQRNEILTSKDISDLMQEIR
                     SDVVSDLVDTYMPPDSMEEQWDIPTLENRLAAEFRLHEDIQSWLKADNAIDGQDIKER
                     LIERIENEYAAKTELVGKQAMADFERNVMLQVIDNQWREHLAAMDYLRQGIHLRSYAQ
                     KNPKQEYKREAFTMFQDLWNGIKFHIASLLTSVQIEQNPVAVVEEQPIGNIQSIHSES
                     PDMEELLGQSQTDLVTEAFNPDGTDFSPEALEARGQIVHRNDPCPCGSGLKYKQCHGK
                     LA"
     gene            6927..8699
                     /locus_tag="WIX18_001122"
     CDS             6927..8699
                     /locus_tag="WIX18_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEZ5238237.1"
                     /translation="MIPSDFIDELLAKTDIVDIIDEQVPLKKGGANYMACCPFHKEKT
                     PSFSVSPTKQFYHCFSCGAHGSAIGFVMEHQGLSFPEAVQFLADRVGMIVPKVRGQND
                     NPEVRAERKKKQQTLEETTAEAADFYAQQLKFNPTAKAYLDKRGLSAEVIAHYGLGYA
                     PDGWQPLAQVFQPYPNTALVDTGMVIDNEGRYYDRFRHRIMFPIRNPRGQVIGFGGRV
                     LDDSKPKYLNSPDTPLFDKGKNLYGLYEGRAAVKEVGRILVVEGYMDVVALAQFGVGY
                     GVAALGTATTAEHVKILMRQADSIYFCFDGDSAGRKAAWRALENALPQLKDDKSLHFL
                     FLPEEHDPDSYIRAYGKAQFEDALLNQSKPLSEYFWEHLSDGIHLNTQEGKAELVKTS
                     SPLLAQITAPALAYLLKQRLSELVGIDPDNLAQLLGQEAPKRHVKQKNYKLPPISVKQ
                     PVMPTLVQRQIRSLLINPDWAAYIDLPDYLALDGDFACLANLAETIKNHPSVPATAQV
                     LEHMRGSPYEETITRIFHSTHQSEEMNSSSEEDCENFQIGMKKLLNELKYSQIETLKQ
                     KSLQSGLNESEKKLLLSLLTAKQN"
     gene            8885..10813
                     /gene="rpoD"
                     /locus_tag="WIX18_001123"
     CDS             8885..10813
                     /gene="rpoD"
                     /locus_tag="WIX18_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HEZ5238238.1"
                     /translation="MSRNQNHEEYQDDARPLTIEEQRARLRQLIIMGKERGYITYSEI
                     NDALPDDMSDADQIDNIVSMISGLGIQVTEHAPDAEDILLSDNAAVTDDDAVEEAEAA
                     LSSADSEFGRTTDPVRMYMREMGQVDLLTREDEIIIAKKIENALKNMVQAISACPGSI
                     AEILELIEKIRKDEIRVDEVVEAIIDPNEVLLNELGLGHLETTAPEKPSNDNSDENED
                     DEESEEDADEISAANLAELKQKVIGHFAQIEKDYKKMIGRLEKHHSRHKDYLAYRDAI
                     ANKLLEVRFATRQIDSLSSSLRGKVENIRKLEREIRDICLDRVHMERDYFIQNFLPEI
                     TNLEWIEEEIAKGRVWSDALDRFRHAILEKQTELADMEKETRISIEELKEINKNMVSS
                     EKETAAAKQEMIQANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYK
                     FSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHLQETGEEPDSAKLA
                     ELMQMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDANNVAPADAAMYTSLHE
                     VTKEILESLTPREAKVLRMRFGIDMNTDHTLEEVGRQFDVTRERIRQIEAKALRKLRH
                     PTRSDRLRSFLDSEDSKL"
BASE COUNT         2849 a         3037 c         2691 g         2318 t
ORIGIN      
        1 ccctaaccct ctcccacggg agagggaatg gattgccgtt gaaataaatc gctctacata
       61 aaaaatcaat gtgttatctc aaacccacgt taggtctaag caaatggtcg gacatccgta
      121 tccggcaagc aagctgcttt cagacggcat ttccagccaa caaccgcgcc aatatcccct
      181 catacaccgc agacagcttc ggaatgtcgt ttagccgcac gttttcgttg atttggtgga
      241 tggtcgcatt ggacgggcct aattcgatga gttcttttgc aatggctttg atgaagcgtc
      301 cgtccgaagt gccgccggtg gtggacaatt cggtctctac gccgcagatt tcggcaatgg
      361 cggcgcgtgc cacgtcggtc agtttgcccg cgtgggtcag gaagggctgc cccgaacacg
      421 accactgcaa atcgtattgc acaccgtgtt tgtccaaaat ggcgtggacg cgttgtttca
      481 gccctgcttc ggtggactcg gtggagaagc ggaaattgaa tttgacgctc agctcgcccg
      541 gaatgacatt ggtcgcgcct gtaccgccgt tgatattgga aatttgaaag ctggtcggcg
      601 ggaagtattt gttgccttcg tcccagactt cctgcgtcag ctctaacaag gccggggcaa
      661 aagtatgcac gggattgatt gccaaatgcg gataggcaat atggccttgc ttgcctttga
      721 cggtcaggtt gcccgacagc gagccgcgcc ggccgttttt aatcatatcg cccaatttgt
      781 ccacggctgt cggttcgccg acgatgcagt agtcgataag ctcgtcgcgc gctttcaata
      841 catcgacgac tttggtcgtg ccgtccaacg cgtcgccctc ttcgtcggaa gtaatcagaa
      901 gcgcaatgct gccttggtgg tcgggatgtt cggcaacgaa gcgttcacag gcggtaacga
      961 agcaggcgat gctggttttc atgtctgccg cgccgcgccc gtataatctt ccgtcgcgct
     1021 cggccggttc gaacgggggc gaatcccatt tttcgacagg acctgtcggt acaacgtcgg
     1081 tatgccctgc aaaacagacg acgggagctt tcgtgccgcg tcgcaaccag atgtttttgg
     1141 tgtcgccgaa atggagttct tcagccgcaa aaccgatttt gtgcaggcgt tcggcaagga
     1201 gtttttggca atccctgtcg tcaggggtaa cggatggtcg ggaaatcagc tctttggcaa
     1261 gctctaggga ttgagtttcg gtcatatttg ttcacttttg aaattagacc gtctgaaacg
     1321 ttctgaatgt gattttcaga cggcatttag gttaggttgg catacggggt gggtatttta
     1381 cccatcagtc ttctgaatca tttgccgtgg caggcttcgt aaagcggcag caaatcttcc
     1441 accgtttccg ctatccattt cgcgacatcc tgcttgccca aatcgtcgcg ctcgatgtgt
     1501 ttgccgatgc agaaaaagtc ttcgtcgttt tgcaactttc ggtcggattc gctttgttgt
     1561 gcgacggtgc ggtagtcgtc atattcgctt tccgcgccgt gccacatatc gaatgcggcg
     1621 tatttgtcgg tatcgaaatc atccaaccag cggttgtatt cgggcagcgc aatcggcgac
     1681 acgtcggctt tgtagcagtg ccaatccaag ctgacgctca ggcggcggcg gttcaataaa
     1741 atcgataaaa tcgcggcgga atttttatat tgttcgtatt tgaagtaggc aaagaaatgg
     1801 gcgcgcacct gccagccgtt acaccagcgt tcgatatgcg gcggcgcgaa cggcgcaccc
     1861 aattcggcgg caacctgctg gatcagctgc tgccatacct gccagttttc tttatagtct
     1921 gccttgattt gcggaatgct ttcaggctgg tattttttaa gctgggaaaa ttggaaaaac
     1981 gggatattga acaaatcgca acttttcgag gtaagcatag tgtattcctt gagacgatta
     2041 ccttatttgc gccgacgcgc cgccatgatt tcaccgattt cggtcagttt ttctttaggg
     2101 ataaaggtgt tgcccatatc aaacagcggc tcttcaatcg ccaaatgaac atcatatccc
     2161 gccacaaaac gtttgaacgc ttccgcatcg ggaacataag cattgtctgc ttcgagcttg
     2221 gcaaattcgg cggaaacagc cgcccagttg tcgtgcagcc cgatatgttg gcgtaaaagc
     2281 tcgtccacac cttcacgtgc ttgcggcgcg tattgcagca gcagcgggaa aaagtcttct
     2341 tcttcgtcct catgatgcag cggcgcggca acgttgaaat accgggtgat ttggcggatg
     2401 gtttgcaaaa caatttgatt gcagccgttt tcggcgatgt agtccgacag catggcgact
     2461 tgtccgcaaa aacggcgcac tttgccgtgg caggcataca gcatttcaat cggttcggca
     2521 aaggtaacgc ttttggtttc aaacggattc atgttttcgt tctcaacggg cacttttcaa
     2581 gcagtcattt tataataaaa cagcctgcac aaagcaggct gtccgtcttt tgagacttta
     2641 agcggattaa tcgaccaaag tcactttgcc gttcatcaaa gcaccgtgac ctgggaaggt
     2701 acaagcgaat ttatattcgc cgtcggccaa tttagcagga tccagagtca gggaagcttc
     2761 ttcgccgccg ccgatcagtt tggtatgggc aacaacgcgt gcatcatcag gtttgacata
     2821 gtcggtatcg gcagcaccta cgccgtcttt aaatacgccg tccatgtctt cagctttggc
     2881 aatcacgaga ttgtgaccca tgctggcttt gggttgcgta ccggtatgtt tcagagtgat
     2941 ggtaaactct ttacatgctt tgctgacttg gatgtctttg gtgttgaact gcatattgtc
     3001 gttggattcg acagttgccg cacagttgcc ggcagcaggg gcttcggcag catctgcagg
     3061 agcagcttcg gcggcaggcg cttcggaagc gggtgcttca gcagcaggag ttgcctcggc
     3121 agcaggcgcg gcaggttctt gagagcaggc agccaaaccg ataacggcgg cagaaatcag
     3181 agccagatac gctttcataa caaatctcca atcgataaaa taatattcgg ttttacggaa
     3241 atcaaagtgc aaccgccatt aacaaaacct tgaaaaagat tccgccgcgt tgcacaaaca
     3301 gatgtttcgg agcggcattt tgctacaaat ttcatttgaa atcaaagcct gtctgcaagt
     3361 ttacaatcgt ttactttaaa aggggcaatt ttaccccgaa cctatttctt tagtattaga
     3421 cccattatcc tttacttctt aatattaacg gatgtttaca caaattcccg tatacatttt
     3481 atgcgccatg ccttctaacc aagtttgcca atgcctccgc caattcggga tgccgttttt
     3541 ccaactttgc cgccgccgaa ccgaaactct ccagcgcagc cttactcaaa tgcagggtat
     3601 tggttttcgg cggtttttcc ggtttcggga ccagcctgac cgaaacagag cgtatcgaaa
     3661 catcaagccc tgccaactgc ggcaataccg acggtgcaat cattttcaaa cgcgatgccg
     3721 ccatattgtt tgccgccaaa aggacaagcc tgccgtcttc gatacatgcc gtctgaaaat
     3781 gcgggtgcag gttggcaggc agcagttttt tcacggcggc atccaaccgc cgccactgtc
     3841 ccgcctgttt caaaagtccg gaaagcagcg cgtcccgcct gcccaactgt tccaaattca
     3901 taaaacatac acccaaaaag attgaaatac cgcaaacgcg cctttatttc agacggcatt
     3961 agcactttgc acaaacgctt gtgttaaaat cgcgttttcg ccccactatt atatcaggcg
     4021 caggaattat tcatgctgac aaacattgcc aagaaaatct tcggcagccg caacgaccgc
     4081 ttgctgaaac aataccgtaa atccgttgcc agaatcaacg cgctcgaaga acagatgcaa
     4141 gccctaagcg atgctgatct gcaagccaaa actgccgaat tcaaacaacg cctcgccgac
     4201 ggtcagactt tggacggcat tttgcccgaa gccttcgccg tctgccgcga agcgtcccgc
     4261 cgcaccctcg gtatgcgcca cttcgacgtg cagcttatcg gcggtatggt gctgcacgac
     4321 ggcaaaatcg ccgaaatgcg taccggcgaa ggcaaaaccc tggtcgccac cctcgccgtc
     4381 tatctcaacg cgctggccgg caaaggcgta cacgtcgtta ccgtcaacga ctacctcgcc
     4441 tcacgcgatg cgggcattat ggagccgctc tacaatttcc tcggccttac cgtgggcgtg
     4501 attatttcag atatgcagcc gttcgaccgt caaaacgcct atgccgccga tatcacctac
     4561 ggcaccaata atgaattcgg cttcgactac ctgcgcgaca atatggttac cgaccaatac
     4621 gacaaagtgc agcgcgaatt gaattttgcc gttgtcgatg aagtggattc catcttgatt
     4681 gacgaagcgc gcactccgct gattatctcc ggtcaggcgg atgacaacat ccagttgtac
     4741 caaatcatga acaccgttcc gccccacctc gtccgtcaag agacagaaga aggcgaaggc
     4801 gactattggg tcgacgaaaa ggcacatcag gtcatcctga gcgaagcagg tcacgaacac
     4861 gccgagcaaa tcctgaccca aatgggattg ctggcagaaa acgactccct ctattccgcc
     4921 gccaatatcg ccctgatgca ccaccttatg gcggcattgc gcgcgcattc cctcttccac
     4981 aaagaccaac attacgtcat ccaagacggc gaaatcgtca tcgtggacga attcaccggc
     5041 cggctgatgt ccggccgccg ctggtcggag ggtctgcatc aagccgtcga agccaaagaa
     5101 ggcgtggaaa tcaaacgcga aaaccaaacc cttgcctcca tcaccttcca aaactatttc
     5161 cgcctgtaca ccaagctctc cggcatgacc ggcacagccg ataccgaagc tttcgagttc
     5221 caaagcatct acaacctcga aaccgtcatc atcccgacca accgccctgt acagcgcaaa
     5281 gacttcaacg accagatttt ccgttccgcc gaagaaaaat tcgaagccgt cgtcaaagac
     5341 atcgaagaat gccacaaacg cgggcagccc gtcctcgtcg gcaccaccag catcgaaaac
     5401 tccgaactgg tctcccacct tctgcaaaaa gccggactgc cgcacaacgt cctcaacgcc
     5461 aaagaacacg aacgcgaagc cctgattgtc gcccaagccg gcaaagtcgg cgcgattacc
     5521 gttgccacca atatggcggg acgcggtacg gacatcgttt taggcggcaa cctgaagcac
     5581 caaaccgatg ccatccgtgc cgacgaaacc ttgagcgacg aagagaaaca ggcacaaatc
     5641 gccgcactcg aaaacggctg gcaggcagaa cacgataaag taatggaagc aggcggcctg
     5701 cacatcatcg gtacggaacg ccacgaaagc cgccgtatcg acaaccaatt gcgcggacgt
     5761 tccggccgtc agggcgaccc cggatccagc cgtttctacc tttcgtttga agacccgctg
     5821 ctgcgcttat tcgcactcga ccgcgccgcc gccatcctca accgtctcgc ccccgaacgc
     5881 ggcgtcgcca tcgaacacaa cctgctgacg cgccaaatcg aaggggcgca acgcaaagtc
     5941 gaaggcagaa acttcgatat gcgcaaacag gttttggaat acgacgacgt tgccaacgaa
     6001 cagcgcaaag tcatttacag ccagcgcaac gaaattctga ccagcaaaga catcagcgac
     6061 ctgatgcagg aaatccgttc tgatgtcgtc agcgacctcg tggataccta tatgccgccc
     6121 gacagcatgg aagaacaatg ggacatcccg actttggaga accgtctggc tgccgaattc
     6181 agactgcacg aagacatcca atcctggctg aaggcggaca atgcgattga cggtcaagac
     6241 atcaaagaac gcctgatcga acgcatcgaa aacgaatatg ccgccaaaac cgaactggtc
     6301 ggcaagcagg caatggccga tttcgagcgc aacgtgatgt tgcaggtcat cgacaaccaa
     6361 tggcgcgaac acctcgccgc tatggactac ctgcgacaag gcatacacct gcgcagctat
     6421 gcccaaaaaa atccgaagca ggaatataaa cgtgaagcct ttaccatgtt ccaagacctg
     6481 tggaacggca tcaaattcca tattgcctcc ctgcttacct cggttcaaat cgaacaaaac
     6541 cctgtcgcgg tggttgaaga gcaacccatc ggcaacatcc agtccatcca ttccgaatcg
     6601 cccgatatgg aagaactttt gggtcagtcg caaaccgatt tggttaccga ggcctttaat
     6661 cccgatggaa cggatttcag ccccgaagcc ttggaagcgc ggggacaaat cgtccaccgc
     6721 aacgacccct gcccctgcgg cagcggtttg aaatacaaac aatgccacgg caaactggct
     6781 tgagcgtttg aacgcaaatg ccgtctgaac atccggtttc cggcttcaga cggcattttg
     6841 cctgaaccgc cacatccgac cgccattccg aaaaatcccg atttcgtacc gtccaaacta
     6901 aaaacaggca tccgccccgc cgaactatga ttccatccga cttcattgac gaacttctgg
     6961 ccaaaaccga tattgtcgac atcatcgacg aacaggttcc gctgaaaaaa ggcggggcga
     7021 actatatggc gtgttgcccg ttccacaagg aaaaaacgcc gtcgttttcg gtcagtccga
     7081 ccaagcagtt ttaccactgt ttcagttgcg gggcgcacgg ttcggcgatt ggttttgtga
     7141 tggaacatca ggggctgtcg tttccggagg cagtgcagtt ccttgccgac cgcgtgggta
     7201 tgattgtgcc taaagtgcgc gggcagaacg ataatcccga agtccgtgcc gaacgtaaga
     7261 aaaagcagca gacgctggaa gaaacgacag cggaggcggc tgatttttat gcgcaacagt
     7321 tgaaattcaa tccgacggcg aaggcttatt tggacaagcg cggcttgagc gcggaagtca
     7381 tcgcgcatta tggtttgggc tacgcgcccg acggctggca gcctttggcg caagtattcc
     7441 aaccgtaccc gaataccgcg ttggtggata cgggtatggt gattgacaat gaggggcggt
     7501 attacgaccg attccgtcat cggattatgt tccccatccg caatccgcgc gggcaggtca
     7561 tcggtttcgg cggcagggtg ctggacgact ccaaacccaa atatctaaac tctcccgata
     7621 cgcctttgtt tgataagggg aaaaaccttt acggcttgta tgaagggcgt gctgctgtca
     7681 aggaagtggg gcggattctg gtggtcgaag gctatatgga cgtggtcgcg ctggcacagt
     7741 tcggcgtggg ctacggcgtg gcggccttgg gcacggcaac aacagcggaa cacgtcaaaa
     7801 tcctgatgcg tcaggcggac agtatttatt tctgtttcga cggcgacagc gcggggcgca
     7861 aagcggcttg gcgcgcgctg gaaaacgcgc tgccgcagtt gaaggacgac aaatcgctgc
     7921 attttttgtt cctgccggaa gaacacgacc ccgacagtta catccgtgcc tacggcaaag
     7981 cgcaatttga agacgcgctt ctgaatcaaa gcaagccttt gtcggagtat ttctgggaac
     8041 acctttcaga cggcattcat ctcaatacgc aggaaggcaa ggcggaattg gtgaaaacca
     8101 gttcgccgct tttggcgcag attaccgcgc cggcattggc ttatttgtta aaacaacggc
     8161 ttagcgaact ggtcggcatc gaccccgaca acctcgcgca actgctggga caggaagcgc
     8221 cgaagcggca cgtcaaacaa aaaaactaca aactgccccc gatttccgtc aaacagcccg
     8281 ttatgccgac attggtgcaa cggcaaatcc gcagcctctt gataaatccg gattgggctg
     8341 catatataga cctgcccgat tatctggcgt tggacggcga tttcgcctgc cttgccaacc
     8401 tcgccgaaac cattaaaaac catccttccg tgccggcaac cgcacaggtt ttggaacata
     8461 tgcgcggctc gccttacgaa gaaacgataa cccgaatctt ccattcaacg caccaatcgg
     8521 aagaaatgaa cagcagcagt gaagaagatt gcgagaattt ccaaatcggc atgaaaaaac
     8581 tgctcaatga gttaaaatac agccaaatcg aaacattaaa acaaaaaagc ctgcaatccg
     8641 gcttaaatga aagcgagaaa aaacttttgc tgtcgctgct gaccgcaaaa caaaattgac
     8701 cggcggattc cgccatccgt aaaccgttat gccgtctgaa aagcacttac cccggctgca
     8761 acaacgacac ctgcagaaca cccatcccaa aaagccttca gacggcatca gagtacccgc
     8821 tctgccacgc cttcaggtgc gttcaaacgc aaaccgtcgg caccttacca acagaaagca
     8881 gacaatgtcc agaaaccaaa atcacgaaga ataccaagac gatgcccgcc ccctgacgat
     8941 tgaggaacaa cgcgctcgcc tgcgccaact catcattatg ggcaaagaac gcggctacat
     9001 cacctactcc gaaatcaacg acgcactgcc cgacgatatg tccgatgccg atcaaatcga
     9061 caacatcgtc agtatgattt ccggtttggg tatccaagtt accgaacacg cccccgatgc
     9121 ggaagacata ttgttaagcg acaatgccgc cgttaccgac gatgatgccg tcgaagaagc
     9181 cgaggccgcc ctttccagcg cagattccga gttcggcagg acgaccgacc ccgtccgtat
     9241 gtatatgcgc gaaatgggac aggtcgacct gctgacccgc gaagacgaaa tcatcatcgc
     9301 caaaaaaatc gaaaacgccc tgaaaaatat ggttcaggcc atctccgcct gcccgggttc
     9361 cattgcggaa atcttagaac tcatcgaaaa aatccgcaaa gacgaaatcc gcgtcgacga
     9421 agtcgtagaa gccattatcg acccgaatga agtattgctc aacgaattgg gcttggggca
     9481 cttggaaacc acagcacccg agaaaccttc caacgacaat tcggacgaaa acgaagacga
     9541 cgaagaatcg gaagaagatg cggatgaaat ctcggcagcc aatctcgccg aattgaaaca
     9601 aaaagtcatc ggccactttg cccaaatcga aaaagactac aaaaaaatga ttggccgttt
     9661 ggaaaaacac cacagccggc acaaagacta tctcgcctac cgcgacgcga ttgccaacaa
     9721 acttttggaa gtccgcttcg ccacccggca aatcgacagc ctcagcagca gcctgcgcgg
     9781 aaaagtagaa aacatccgca aactcgaacg cgaaatccgc gacatctgcc tcgaccgcgt
     9841 ccatatggag cgcgactact tcatccaaaa cttcctgccc gaaatcacca atctggaatg
     9901 gattgaagaa gaaatcgcca aaggcagggt ttggagcgac gcgctcgacc gcttccgcca
     9961 cgccatcctc gaaaaacaaa ccgagttggc ggatatggaa aaagaaaccc gcatttccat
    10021 cgaagagttg aaagaaatca acaaaaatat ggtgtcaagc gaaaaagaaa ccgcagctgc
    10081 caaacaggaa atgattcagg caaacttgcg cctcgtcatt tccattgcca aaaaatacac
    10141 caaccgtggc ttgcagttcc ttgatttgat tcaggaaggc aacatcggcc tgatgaaagc
    10201 ggtcgacaag ttcgaatacc gacgcggcta taagttctcc acctacgcaa cctggtggat
    10261 ccgtcaggca atcacccgct cgattgccga tcaggcgcgt accatccgca ttccggtaca
    10321 tatgattgaa accatcaaca agatgaaccg catctcgcgc caacaccttc aagaaaccgg
    10381 cgaagaaccc gattccgcca aacttgccga actgatgcag atgcccgaag acaaaatccg
    10441 caaaatcatg aaaatcgcca aagagccgat ttcgatggaa acccccatcg gcgacgacga
    10501 cgattcgcac ttgggcgact tcatcgaaga tgccaacaat gttgcgccgg ccgatgcggc
    10561 aatgtacacc agcctgcacg aagtaaccaa agaaatcctc gaaagcctga caccgcgtga
    10621 ggcaaaagtc ctgcgtatgc gtttcggcat cgatatgaac accgaccaca cgctggaaga
    10681 agtcggcaga cagtttgacg taacgcgcga acgcatccga caaatcgagg caaaagcact
    10741 ccgcaaatta cgccatccga caagaagcga ccgtttgaga agtttcttgg acagcgaaga
    10801 cagcaagctg taaaccaaaa aaccgcaggt ttcaaatacc tgcggttttt tcttacacaa
    10861 taaacaacgc ttccacatat cccacactcc tatcc
//
LOCUS       DAWITQ010000057        10697 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.057, whole genome shotgun sequence.
ACCESSION   DAWITQ010000057 DAWITQ010000000
VERSION     DAWITQ010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10697)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10697)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10697
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.057"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..601)
                     /locus_tag="WIX18_001124"
     CDS             complement(<1..601)
                     /locus_tag="WIX18_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEZ5238239.1"
                     /translation="MGGGIADGYQCRLKDVVWKTLGEIAEYSKNRICSDKLNEHNYVG
                     VDNLLQNREGKKLSGYVPSEGKMTEYIANDILIGNIRPYLKKIWQADCTGGTNGDVLV
                     IRVTDEKVNPKYLYQVLADDKFFAFNMKHAKGAKMPRGSKAAIMQYKIPIPPLPEQEK
                     IVAILDKFDTLTHSVSEGLPYEIALRRKQYEYYREQLLAF"
     gene            complement(590..1164)
                     /locus_tag="WIX18_001125"
                     /pseudo
     CDS             complement(590..1164)
                     /locus_tag="WIX18_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213928.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
     gene            complement(1286..1378)
                     /locus_tag="WIX18_001126"
     CDS             complement(1286..1378)
                     /locus_tag="WIX18_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-damage-inducible D domain protein"
                     /protein_id="HEZ5238240.1"
                     /translation="MTTENNAFENAKHIDETGNEYWSVCTLQTK"
     gene            complement(1495..3039)
                     /locus_tag="WIX18_001127"
     CDS             complement(1495..3039)
                     /locus_tag="WIX18_001127"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HEZ5238241.1"
                     /translation="MMTEMQQRAQLHRQIWKIADEVRGAVDGWDFKQYVLGTLFYRFI
                     SENFTDYMQAGDSSIDYAAMPDSIITPEIKDDAVKVKGYFIYPSQLFCNIAAEAHQNE
                     ELNTKLKEIFTAIESSASGYPSEQDIKGLFDDFDTTSSRLGSTVADKNKRLAAVLKGV
                     AELDFGSFEDHHIDLFGDAYEYLISNYAANAGKSGGEFFTPQSVSKLIARLAVHGQEK
                     VNKIYDPACGSGSLLLQAKKQFDEHIIEEGFFGQEINHTTYNLARMNMFLHNVNYNKF
                     HIELGDTLTNPKLKDSKPFDAIVSNPPYSINWIGSDDPTLINDDRFAPAGVLAPKSKA
                     DFAFILHALNYLSGRGRAAIVSFPGIFYRGGAEQKIRQYLVEGNYVETVIALAPNLFY
                     GTGIAVNILVLSKHKDNTDIQFIDAGSFFKKETNNNVLTEEHIADIVKLFADKADVPH
                     IAQNAAQQTVKDNGYNLAVSSYVEPEDTREIIDIKQLNAEIGETVAKIERLRREIDEV
                     IAEIEA"
     gene            complement(3112..4116)
                     /gene="rfaD"
                     /locus_tag="WIX18_001128"
     CDS             complement(3112..4116)
                     /gene="rfaD"
                     /locus_tag="WIX18_001128"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HEZ5238242.1"
                     /translation="MTIIVTGAAGFIGSNIVKALNQRGITDIVAVDNLSKGEKFKNLA
                     ECEIAHYLDKHEFIRQVREHILPYQNIEAVFHQGACSDTMNHDGLYMMENNYQYTLDL
                     LNWCQDERIPFLYASSAAVYGKGEIFREERELEKPLNVYGYSKFLFDQVLRRRMKEGL
                     TAQVVGFRYFNVYGQHEQHKGRMASVTFHHFHQYREHGYVNLFGSNDGYGNGEQTRDF
                     VSVEDVAKVNLYFFDHPELSGIYNLGTGRSQQFNELAAATVNACRAAEGKPEMSLKEL
                     VEEELIRYIPFPDALKGKYQSFTQADITKLREAGYTEEFFDVKSGVERYVKWMLENLA
                     "
     gene            complement(4157..5275)
                     /locus_tag="WIX18_001129"
     CDS             complement(4157..5275)
                     /locus_tag="WIX18_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEZ5238243.1"
                     /translation="MPDFQRITIENIEYFIVDSIQNLRAEDSFIHRNNKLSVFGGNGE
                     ARKYVGSYIDDSGRKLSTFFEYENWGITETKNGRRVEYPLIQKNCFFNKKNLQRYLVD
                     AKVEYHKQEQKYHHDISRFYDDYVLSINNLPTENIFFSIHDVSDHLENSKGYRRGYIR
                     SEDDIWSIWRKIVLPKISYLSILKLLPVKDIEDSEPLFYFRIFLDYQFRSIVHPQLLS
                     REKLEIPASEFNQFVEQEIIKQKSRKGQQKYRKDVINHMPQCPFTLITDEVLLRASHI
                     KPYMVCITEKNEKEALDYLNGLALTPTYDWLFDQGYITFLDDGRLICGTRLSRYTWEK
                     LNINPNAKNKMRIYPEGREKYLEYHRKFVFQDNIDDFL"
     gene            complement(5277..6512)
                     /gene="dcm"
                     /locus_tag="WIX18_001130"
     CDS             complement(5277..6512)
                     /gene="dcm"
                     /locus_tag="WIX18_001130"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEZ5238244.1"
                     /translation="MTISTMAQTHDTRLQKTLLFPSQQGWKSKTFLKPDSHIRLATVF
                     SGIGAVEQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHNDITQFDARKFRN
                     QVDILVGGSPCQAFSMVGKRAGLEDTRGTLFYEFSRVVDEVQPKIFIYENVKGLLNHD
                     NGKTWKVVKSVFYSLGYDLYFQIMNSKDYGIPQHRERIFVVGFHTPPINGFQFPEKIE
                     LEHTMQDFLEDYTDSKYFLREKGVKFVTSSKNRQKRYTQINGEIALCQKANQQFNWHG
                     DFIFQAARESEFDDFIFDVNNVEEKYYLSEKIKNYVLAGGTKNFKTSTETDLPVARPL
                     LQTMHKMHRAGVDNYVTHNRGRIRKLTPRECLRLMGFRDDFKILVSDTQMYRQAGNSI
                     VVDVLIAILKQMDITLYGE"
     gene            complement(6549..7520)
                     /gene="hldA"
                     /locus_tag="WIX18_001131"
     CDS             complement(6549..7520)
                     /gene="hldA"
                     /locus_tag="WIX18_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose synthase"
                     /protein_id="HEZ5238245.1"
                     /translation="MSAKFQQETLKSRFAQAKVLVVGDVMLDRYWFGDVSRISPEAPV
                     PVAKIGRIDQRAGGAANVARNIASLGGRAGLLSVTGNDEAADALDALMVQDGVASYLM
                     RDKQIATTVKLRVVARNQQLIRLDFEEHPNCEVLEQIKQKYREILPEYDAIIFSDYGK
                     GGLSHISDMIDWAKHAGKTVLIDPKGDDYEKYVGATLITPNRAELKEVVGSWKNESEL
                     TEKAQNLRRHLDLTAVLLTRSEEGMTLFSEGEPIYQPTRAQEVYDVSGAGDTVIAGMG
                     LGLAAGCTMPEAMYLANTAAGVVVAKLGTAVCSFAELIKALSGQSTM"
     gene            complement(7575..8315)
                     /gene="pyrF"
                     /locus_tag="WIX18_001132"
     CDS             complement(7575..8315)
                     /gene="pyrF"
                     /locus_tag="WIX18_001132"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003756133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEZ5238246.1"
                     /translation="MNPLISDFQTPQQRTPVIVALDFSNEKDTLGFVRNLDPTLCQIK
                     IGKELFTATGRNLAESLINQGFKLFLDLKYHDIPHTVAQACKVAADMGVWMVDMHASG
                     GRRMMEAAAEAVAGYGTKPLLIGVTVLTSMEQSDLAEIGLNTAPEEQVIRLAKLAQSS
                     GLDGVVCSAQEAAPLRRELGQDFVLVTPGIRLDVAGNNDDQRRIMTPAEALAAASTYL
                     VMGRPVTQAADPVAVLREVNRVANLEAN"
     gene            complement(8841..9488)
                     /gene="adk"
                     /locus_tag="WIX18_001133"
     CDS             complement(8841..9488)
                     /gene="adk"
                     /locus_tag="WIX18_001133"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HEZ5238247.1"
                     /translation="MKALFLGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTP
                     LGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPRTLAQAEAMVEAGVD
                     LDAVVEIDVPDSVIVDRMSGRRVHLASGRTYHVTYNPPKVEGKDDVTGEDLIQRDDDK
                     EETVKKRLAVYHEQTEVLVDFYSKLEGEHAPKYIKVDGTQPVEAVKAEVLGALGK"
     gene            9703..10542
                     /gene="htpX"
                     /locus_tag="WIX18_001134"
     CDS             9703..10542
                     /gene="htpX"
                     /locus_tag="WIX18_001134"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HEZ5238248.1"
                     /translation="MKRIFLFLATNIAVLVVINIVLAVLGINSRGGTGSLLAYSAVVG
                     FTGSIISLLMSKFIAKQSVGAEVIDTPRTEEEAWLLNTVEAQARQWNLKTPEVAIYHS
                     PEPNAFATGASRNSSLIAVSTGLLDHMTRDEVEAVLAHEMAHVGNGDMVTLTLIQGVV
                     NTFVVFLSRIIANLIARNNDGSQSQGTYFLVSMVFQILFGFLASLIVMWFSRQREYRA
                     DAGAAKLVGAPKMISALQRLKGNPVDLPEEMNAMGIAGDTRDSLLSTHPSLDNRIARL
                     KSL"
BASE COUNT         2586 a         2496 c         2488 g         3127 t
ORIGIN      
        1 gaaaggcaag cagctgttcg cggtaatatt cgtattgttt gcggcgcagg gcgatttcgt
       61 acggcaggcc ttcgctgacg gagtgggtca gggtgtcgaa tttgtctagg atggcgacga
      121 ttttttcctg ttcggggagt ggtgggatgg ggattttata ttgcataatc gctgctttgc
      181 tgccacgcgg catttttgca cctttggcgt gcttcatatt aaaggcaaaa aatttatcat
      241 cggccaatac ctgatacaga tattttggat taaccttttc atctgttacc cggataacca
      301 aaacatcacc gtttgttccg cccgtgcagt ctgcctgcca gatttttttc aaatacggac
      361 gaatatttcc aatcaagatg tcattggcaa tatattctgt catttttccc tcacttggaa
      421 cataaccgga taacttttta ccttctctat tttgtaagag attatccacg cccacgtaat
      481 tatgttcgtt cagtttatcc gaacaaatac ggttttttga atattcggca atctccccca
      541 acgtcttcca aaccacatct ttcagacggc attgatagcc atcagctatc ccccccccga
      601 tttgattgtc aaaatctaaa agaaagtcgc ggtaataccg gtattggcgt ttgcgcaggg
      661 ctaattccgc ttccagctcg gtgaatttgt caagtatttt tacaattttt tgttgggttt
      721 ctaggggcgg gatgggaata agtaagtttt gcaattcact tttagcaagt gctggtatac
      781 ctgctccgta ttgacattgc atgaatgtaa tttgcttcat ttttaaaaat aatatgcaaa
      841 ccgttgcaat agtttgtctt cgttcgcttt aatagtatat gcgtgagctc ctgcaaaaaa
      901 agggatatcc atccaattaa caaaccccgc acttgctcct ccttggctaa taacaatcgt
      961 gccagcttcg ttattgtatt catgccaata acctgatgga ttaataccgc cattgattac
     1021 gggatactta tctttttctc taagtagtga tttattaagc tgctttccct ttcctatact
     1081 tgccacttcc cccaacggct tccactccac cggtgccgtc tgaatcatct caatcaattt
     1141 tttcgcttta ctttgtatat ccatggttgt tttccgtttc tttcccgctg cggcgggatg
     1201 tggggcggtt atccgccgta gggtgggctc cagcccaaca atccgcctgc tgttttgccg
     1261 ttgtttcggg gggctgaagc ccaccctact ttgtctgcaa ggtgcacacc gaccaatatt
     1321 cattgcctgt ttcgtcgatg tgtttggcgt tttcaaaagc gttgttttct gttgtcatgt
     1381 atttttcccc gaaaatttct tgatttgaac ttgtaaagat tacttacagg ttaccgcccg
     1441 tattttcaga cggcctcttt cccattcagt tgttgcaaaa tatgcaacaa ctgcctaggc
     1501 ctcaatctct gcaatcactt cgtcaatttc gcgccgcagc cgttcgattt tggcgacggt
     1561 ttcgccgatt tcggcgttaa gctgtttgat gtcgataatt tcgcgtgtgt cttcgggttc
     1621 aacatagctg ctgacggcga ggttgtagcc gttgtctttg acggtttgct gggcagcgtt
     1681 ttgggcgata tgcggcacat cggctttgtc ggcgaagagt ttgacgatgt cggcaatgtg
     1741 ttcttcggtt aagacgttgt tgttggtttc ttttttaaag aagctgcctg cgtcgataaa
     1801 ttggatgtcg gtattgtctt tgtgtttgga caaaaccagg atattgacgg cgataccggt
     1861 gccgtaaaag agattgggcg caagggcaat cacggtttcc acgtagttgc cctccaccag
     1921 atattggcgg attttctgct ctgcgccgcc gcgatagaaa ataccgggga aagagacgat
     1981 ggcggcgcgg cctctgccgg aaaggtagtt cagtgcgtgc aggatgaagg caaaatcggc
     2041 tttggatttc ggtgcgagta cgcctgcggg ggcaaagcgg tcgtcgttga ttaaggtggg
     2101 gtcgtcgctg cctatccagt tgatggaata aggcggattg gaaacgatgg catcaaaggg
     2161 tttgctgtct ttgagcttgg gattagtcag tgtgtcgccc aattcgatgt ggaatttgtt
     2221 gtaattgacg ttgtgcagaa acatattcat gcgggcgagg ttgtaggtgg tgtggttgat
     2281 ttcctgcccg aagaagcctt cttcgatgat gtgctcgtca aactgttttt tcgcctgcaa
     2341 gagcaggctg cccgagccgc aagctgggtc gtagattttg tttactttct cctgcccgtg
     2401 caccgccagc cgcgcaatca gcttggatac gctttgcggg gtgaaaaatt cgccgccgga
     2461 tttgcctgcg ttggcggcgt agttggaaat caggtattcg taggcatcgc cgaaaaggtc
     2521 gatgtggtgg tcttcaaaac tgccgaaatc aagttccgcc acgcctttga ggacggcggc
     2581 aaggcgtttg ttcttgtcgg caactgtgct gccgagccgg ctgctggtgg tatcgaagtc
     2641 gtcaaacagg cctttaatgt cttgttcgga cggatagccg gaggcggagc tttcaatcgc
     2701 ggtaaagatt tctttcagct tggtgttgag ctcttcgttt tgatgggctt cggcggcaat
     2761 attgcaaaaa agctggctgg ggtagatgaa atagccttta actttgacgg catcgtcttt
     2821 gatttcgggc gtgatgatgc tgtccggcat agcggcgtaa tcaatactgc tgtcgcctgc
     2881 ctgcatatag tcggtgaagt tttcgctgat aaagcggtag aaaagtgtgc cgagaacgta
     2941 ttgtttaaag tcccagccat ccaccgcgcc gcgtacttcg tcggcaattt tccaaatttg
     3001 gcggtgcagt tgggcgcgtt gttgcatttc ggtcatcatc gaaatccata taaaagttaa
     3061 acaaatcaaa atcgcctgat attttcagac gattttttac gggcattcaa attaagccaa
     3121 attttccagc atccatttga cgtagcgctc gacgcctgat ttgacatcga aaaattcttc
     3181 cgtataacct gcctcacgca atttggtgat gtcggcttgg gtgaagctct ggtatttgcc
     3241 tttgagtgcg tcggggaagg ggatgtagcg gataagttct tcttccacca gctctttcaa
     3301 gctcatttca ggcttgcctt cggcggcgcg gcaggcgttg acggtggcgg cggcgagttc
     3361 gttaaactgt tggctgcggc cggtaccgag gttgtagatg ccggaaagtt cgggatggtc
     3421 gaagaagtag aggttgactt tggcaacgtc ttcgacgctg acaaagtcgc gggtttgttc
     3481 gccgttgccg taaccgtcat tgctgccgaa caggttgacg taaccgtgtt cgcggtattg
     3541 gtggaaatgg tggaaggtga cggatgccat gcggcctttg tgttgttcgt gttgtccgta
     3601 aacgttgaag tagcggaagc cgacgacttg ggcggtgaga ccttctttca tgcggcggcg
     3661 caatacttgg tcgaacagga atttggagta gccgtacaca ttaagcggtt tttcgagttc
     3721 gcgctcttcg cggaagattt cgcctttgcc gtaaaccgcc gcactggagg cataaaggaa
     3781 gggaatgcgt tcgtcctgac accagttcaa caaatccagc gtgtactggt agttgttttc
     3841 catcatatac aaaccgtcgt ggttcatcgt atcggaacac gcgccttgat ggaaaacggc
     3901 ttcgatgttt tgataaggta aaatgtgttc cctcacttgg cggatgaatt cgtgtttgtc
     3961 gagataatgg gcgatttcgc actcggcaag gtttttgaat ttttcgcctt tgctcaaatt
     4021 atcgacggcg acgatgtcgg taataccgcg ttgattaagt gctttgacga tgttgctgcc
     4081 gataaagccg gccgcgcctg ttacgatgat ggtcatattc ggtttccttt gttttgagta
     4141 aaattaataa acttagttac aagaaatcat cgatattgtc ctgaaacaca aatttgcgat
     4201 gatattccaa atatttttct cttccttcgg gatatattct catcttattt tttgcatttg
     4261 gattgatatt aagtttttcc catgtgtaac ggcttagtcg agtaccgcaa atcaaacgac
     4321 catcatccaa gaaagtaata taaccttgat cgaacaacca atcataagtc ggcgttaaag
     4381 ctaacccatt taaataatct aatgcctctt tctcattttt ctcagtaata caaaccatat
     4441 aaggtttaat atgactagcc cttaacaaaa cctcatctgt aattaatgta aatggacatt
     4501 gcggcatatg atttataaca tccttgcgat atttctgctg cccttttcta cttttctgtt
     4561 taatgatttc ttgctctacg aattgattaa attctgaagc cggtatttct aatttttctc
     4621 ttgataagag ttgcgggtgc acgatagagc gaaattgata atccaaaaat attcggaaat
     4681 aaaataatgg ttctgaatct tctatatctt tgacaggcaa tagtttaaga attgataaat
     4741 aactaatttt gggcaataca atcttacgcc aaattgacca tatatcatcc tccgaacgga
     4801 tataacccct acggtaacct ttagaatttt ccaaatggtc tgatacatca tggattgaaa
     4861 agaaaatatt ttctgtaggc agattattaa tacttaaaac gtaatcatca taaaaccttg
     4921 aaatatcatg atgatatttc tgttcttgtt tgtgatattc aacttttgca tcaaccaaat
     4981 aacgctgtaa atttttctta ttaaaaaaac aatttttctg aatgagagga tattctaccc
     5041 tccttccatt ttttgtctca gtaatccccc aattttcata ctcaaaaaat gtacttagtt
     5101 ttcgaccact atcatcaata taactaccta catatttgcg tgcttcccca ttaccaccaa
     5161 aaacagataa cttgttattc ctgtgaataa aactatcttc cgcacgtaaa ttttgaatac
     5221 tatcgacaat aaaatactct atgttttcaa tagtaattct ttgaaaatcc ggcattttac
     5281 tctccataaa gcgtaatatc catttgtttt aatatagcga ttaatacatc aacaacaata
     5341 ctgtttcccg cttggcgata catttgagta tcactaacta aaattttaaa atcatctcta
     5401 aaacccatta gccgcaaaca ttccctaggt gttaatttac gaatacgtcc acgattatga
     5461 gtaacataat tatcaacccc ggcacgatgc attttatgca tagtttgcaa taatgggcga
     5521 gctacaggca aatcagtttc cgtactggtt ttaaaatttt ttgttcctcc tgccaaaaca
     5581 taatttttga ttttttcaga aagataatat ttttcctcaa cgttatttac atcaaaaata
     5641 aagtcatcaa attcagattc gcgggctgcc tgaaaaataa aatcaccatg ccaattaaat
     5701 tgttgatttg ctttttggca taaggcaatt tctccattaa tctgtgtata acgtttttgt
     5761 ctatttttag aactggtaac aaatttcaca cccttttcac gtaaaaaata tttgctatca
     5821 gtatagtcct ccaaaaaatc ttgcatagta tgttctaatt caatcttttc aggaaactga
     5881 aaaccattta taggaggggt atgaaagcca acaacaaaaa tacgctcacg atgttgagga
     5941 atcccataat ccttactatt cattatttgg aaatataagt cataaccaag tgaataaaaa
     6001 acacttttta caactttcca agtttttcca ttatcatgat tgagcaagcc ctttacattt
     6061 tcataaataa atatctttgg ttggacttca tccacaacgc gagaaaattc atagaataat
     6121 gttcctcgtg tatcttctaa tcctgcacgt ttgccaacca tggaaaatgc ttggcaagga
     6181 ctgcctccaa ctaaaatatc aacttgattt ctaaactttc tcgcatcaaa ttgagtaatg
     6241 tcgttatgcc aaaaatcttc atttaattta tagtttccaa gataactttt tttaacgtat
     6301 ggatcaatat ctcctgcaaa aacaatggta tggtttaaat ttaatcggtg gaatgcctgt
     6361 tcaaccgcac caatcccgct gaatacggtt gctaatctaa tatgtgaatc aggtttaaga
     6421 aaagttttag atttccaacc ttgttgactg ggaaagagca aagttttttg taatcgagta
     6481 tcgtgtgtct gtgccattgt cgaaatagtc atacttatat cgttctgttt atcttatcaa
     6541 tatgaaaact acattgttga ttgccctgac aatgccttga tcaattcggc aaacgagcaa
     6601 accgccgtac cgagtttcgc cacgacaacc ccggccgcag tattggcaag gtacatggct
     6661 tcgggcatgg tgcagcctgc cgccaaaccc aagcccattc cggcaatgac ggtgtcgccc
     6721 gcaccggata cgtcgtaaac ttcttgggcg cgggtgggct ggtaaatcgg ttcgccttcg
     6781 ctgaacaagg tcatgccttc ttcgcttcgg gtcagtaaaa cggcggtcag gtcgaggtgg
     6841 cggcgcaggt tttgcgcttt ttcggtcagc tcgctttcgt ttttccaact gccgaccact
     6901 tctttcaatt cggcgcggtt aggcgtaatc agagttgcac cgacatattt ttcgtaatcg
     6961 tcgcctttgg ggtcgattaa gacggttttg ccggcgtgtt tcgcccaatc gatcatatcg
     7021 gagatatgcg acaggccgcc tttgccgtag tctgaaaaaa tgattgcgtc gtattcgggc
     7081 aagatttcgc ggtatttctg cttgatttgt tccaacactt cgcagttggg atgttcttca
     7141 aaatcaagac ggataagctg ctggttgcgg gcgacgacgc gcagtttgac ggtggtggcg
     7201 atttgtttgt cgcgcatcag ataggaggcg acgccgtcct gcaccatcag cgcatcgagc
     7261 gcgtcggcgg cttcgtcgtt gccggttacg gacaacagcc ctgccctgcc gcccaacgaa
     7321 gcgatgttgc gcgcgacatt tgccgctccg cccgcgcgtt ggtcgattcg tccgattttc
     7381 gccaccggca cgggggcttc gggcgaaata cgggacacat cgccgaacca atagcggtcg
     7441 agcatcacgt cgccgacaac caggactttg gcttgcgcga aacgggattt gagggtttct
     7501 tgttggaact tggcggacat attgcctccg ttgtattttt tcagacggcc tcagcctgta
     7561 aggccgtctg aaaatcagtt tgcttcaagg tttgccacgc ggttcacttc gcgcaatacg
     7621 gctaccggat cggcagcttg ggttacagga cgacccatta ccaaataagt cgaagcggca
     7681 gccaaggctt cggccggtgt catgatgcgg cgctggtcat cattattgcc ggcaacgtcc
     7741 aagcggatgc cgggcgtgac caagacaaaa tcttgtccca actcgcggcg cagcggtgcg
     7801 gcttcttggg cggaacagac cacgccgtcc aagcccgaac tttgcgccag tttcgccaag
     7861 cggatgactt gttcttcagg ggcggtgttc aaaccgattt ccgccaaatc gctttgttcc
     7921 atgctggtca acacggttac gccgattaag agcggcttcg tgccgtatcc ggcaacggct
     7981 tctgctgcgg cttccatcat acggcggccg cccgatgcgt gcatatcgac catccaaacg
     8041 cccatatcgg cagcgacttt gcaggcttgc gcgacggtgt ggggaatatc gtggtatttc
     8101 aaatcgagga aaagtttgaa accttgattg attaagcttt ctgccaaatt gcgtcccgtc
     8161 gcggtaaaca gctctttgcc gattttgatt tgacacaatg tcgggtcaag gttgcggacg
     8221 aatccgagcg tgtctttttc gttggaaaaa tcaagggcga cgataacggg ggtgcgttgt
     8281 tgcggagttt ggaagtcgga gattaaagga ttcatggtgt tttcgtttcg ggttttcaga
     8341 cgacctttat cgtctttttc gcagtatagt ggattaactt taaaccggta cggcgttgtc
     8401 tcgccttagt tcaaagagaa cgcttctcta aggtgctgaa gcacaaagtg aatcggttcc
     8461 gtactgtttg tactgcctgc ggcttcgtcg ccttgtcctg atttttgtta atccactata
     8521 agaacgtaaa ttcaaaccgt aggtcgggca ttgatgtccg acctacgcgg actcaagcct
     8581 ccgacaaact gtttcggata aatttgaacc ggtacatcag ccgtcattcc cgcgtaggcg
     8641 ggaatccatt gataaaactc agttcatcag atttaaacag cgattgccca aattcagaaa
     8701 tggattcccg cctgcgcggg aatgacgcca aatgattatt tttcggttgc aacacgctgt
     8761 ttatcaaaaa caggtcgtct gaaaacctga ttttctgttt tcagagtgcg aagcctgccc
     8821 gtgggtacga ccttttcgat ttatttgccc aatgcgccca atacttcggc tttcacggct
     8881 tctaccggct gagtgccgtc aactttgatg tatttaggcg cgtgttcgcc ttccagtttg
     8941 ctgtaaaaat cgaccaaaac ttcggtttgc tcgtggtaaa cggcaaggcg ttttttcacg
     9001 gtttcttctt tgtcgtcgtc gcgctgaatc aaatcttcgc cggttacgtc gtctttgcct
     9061 tcaactttgg gcgggttgta ggtaacgtgg taagtacggc cggaagccaa atgcacgcgg
     9121 cggccgctca tgcggtcgac aatcacgctg tcaggcacat cgatttcaac gactgcatcc
     9181 aaatccacgc ctgcttcaac catcgcttcg gcttgtgcca atgtgcgcgg gaaaccgtca
     9241 aacaggaaac cgtttttgca gtcgtcttgc gcgatgcgtt ctttgaccat gccgataatg
     9301 atgtcgtcgc gcaccaagcc gccttcatca atgatttttt tcgcttccaa acccaagggc
     9361 gtgcctgcct taatcgcggc gcggagcatg tcgccggtag agatttgcgg aatgccgaac
     9421 gcggcggtga tgaattgcgc ctgagtgcct ttgcccgcgc ccggcgcgcc taaaaataat
     9481 gctttcatga agtgatcctt tgaaatgtgt ttattggaat caaacagatg gtttacgatt
     9541 ctacacggct tggcacaata gttcaaaaac caactgcaca aactgccatt tgcaagcaaa
     9601 tgttttgcat acctttgccg agtctgatat tcacaagccg gcaacttttt gggacaatcc
     9661 ccaaaatttc aaaacatcac accctaccaa aaaggaacat ccgtgaaacg aatttttctg
     9721 tttttggcta ccaatatcgc tgttttggtc gtaatcaaca ttgttttggc ggttttgggc
     9781 atcaacagcc ggggcggcac gggcagcctg ttggcgtatt ccgccgtcgt cggcttcact
     9841 ggttcgatta tttcgctgct gatgtccaaa ttcatcgcca aacaatcggt cggcgcggaa
     9901 gttatcgaca cgccgcgcac cgaagaagaa gcctggcttt tgaacactgt cgaagcccaa
     9961 gcgcggcaat ggaacctgaa aacgcccgaa gtcgccatct accactcccc cgaacccaat
    10021 gcctttgcca cgggcgcatc gagaaacagc tccctgatcg ccgtcagcac cggtttgctc
    10081 gaccatatga cgcgcgacga agtggaagcc gtattggcgc acgaaatggc acacgtcggc
    10141 aacggcgata tggttacgct gacgctgatt caaggcgtgg tcaatacctt cgtcgtgttc
    10201 ctgtcgcgca ttattgccaa cctgattgcc cgaaacaacg acggcagcca gtcgcaggga
    10261 acttatttcc tggtcagcat ggtattccaa atcctattcg gcttccttgc cagcttaatt
    10321 gtcatgtggt tcagccgaca acgcgaatac cgcgccgacg cgggcgcggc aaaactggtc
    10381 ggcgcaccga aaatgatttc cgccctgcaa aggcttaaag gcaacccggt cgatttgccc
    10441 gaagaaatga acgcaatggg catcgccgga gatacgcgcg actccctgct cagcacccac
    10501 ccttcgctgg acaaccgaat cgcccgcctc aaatcgctct gagccgattt gaaacaacaa
    10561 aaaaaccgta cgcgcaagca gtacggtttt ttgtatatgc tgtctgaaaa catcaggttt
    10621 ccataccaac accaaccgta tccatttccg caccggatac gccgcattga tataccctga
    10681 taaaccgtgt ccggaca
//
LOCUS       DAWITQ010000058        10673 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.058, whole genome shotgun sequence.
ACCESSION   DAWITQ010000058 DAWITQ010000000
VERSION     DAWITQ010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10673)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10673)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10673
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.058"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(38..733)
                     /locus_tag="WIX18_001135"
     CDS             complement(38..733)
                     /locus_tag="WIX18_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEZ5238249.1"
                     /translation="MKLKTLALTSLTLLALAACSKQAETSVPADSVQSSSSAPAAPAP
                     LTEGVNYTVLSTPIPQQQAGKVEVLEFFGYFCPHCAHLEPVLSEHIKTFKDDTYMRRE
                     HVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
                     DGKKVLAAFEASESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQ
                     LVDKVREEQKKPQ"
     gene            complement(904..1563)
                     /locus_tag="WIX18_001136"
     CDS             complement(904..1563)
                     /locus_tag="WIX18_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEZ5238250.1"
                     /translation="MKTAILIDGAFFIKRVRSLGLSQNPHDAKRIADLAFRYSMLHLK
                     DKINGTDQMDDLYRIFFYDCVPFEKKMHNPVSHRAIDFSKTPEAIFRCNLHTELKKKR
                     KLALRLGKLSDNTAWILKPQVMKNLLKNPSTQITENDVVLDVKQKGVDMRIGLDISSI
                     TLKKQADKIILFSGDSDFVPAAKLARREGIDFILDPMWNHVPPDLMEHIDGLKTKCPK
                     P"
     gene            complement(1761..3872)
                     /locus_tag="WIX18_001137"
                     /pseudo
     CDS             complement(1761..3872)
                     /locus_tag="WIX18_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226965.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            complement(4058..4663)
                     /locus_tag="WIX18_001138"
     CDS             complement(4058..4663)
                     /locus_tag="WIX18_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEZ5238251.1"
                     /translation="MTRQSLQQAAESRRSIYSLNKNLPVGKDEIVQIVEHAVLHTPSS
                     FNSQSARVVVLFGEEHDKVWQFVEDALCAVVPADSFEPTAQKLNLFKAGAATILFYED
                     QNVVKGLQEQFPAYAANFPVWADQANAMVQYAVWTTLAAVGVGANLQHYNPLPDAAIA
                     KAWNIPENWLLRAQMVIGGIEGAAGEKTFEPVAERLKVFGA"
     gene            complement(4712..5110)
                     /locus_tag="WIX18_001139"
     CDS             complement(4712..5110)
                     /locus_tag="WIX18_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEZ5238252.1"
                     /translation="MSDCCNRIQPVLLSVLRIVTAYLFLLHGTSKIFAFPIEMGSGSP
                     GGLLLLAGILEIVGGILLVLGLFARPAAFVLSGQMAVAYFMAHASGNALFPIANGGES
                     AVLFCFVFLYIAAAGGGAWSLDRLFFKRKA"
     gene            5218..6129
                     /locus_tag="WIX18_001140"
     CDS             5218..6129
                     /locus_tag="WIX18_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEZ5238253.1"
                     /translation="MDTLFSLKVFRQVVQSGGFTRAADALGISTAMASKHVSHLENTV
                     QAKLLHRNSRNLSLTGAGEEYYRQCSYALDTLDDAAQKAAGGTEKPQGLLRVTMPLWF
                     AGSQICNWLAEYRERYPEVALELILDNRHVDLIAEGVDLALRVSQTLSPSLIARPLAE
                     IEFALLASPDFLRRNGVPETPEEVAGLPAVLPTYTNQQKLDLTRKSDGKKYRLELTPV
                     IRTDNTLMMREMIKAGACIGYQPLWAAEHDLRCGTLVRLLPGYAVPTDRLNAVYADRA
                     FLSAKVRSFIDFLNEKIASRKGCRNAV"
     gene            6119..7420
                     /locus_tag="WIX18_001141"
     CDS             6119..7420
                     /locus_tag="WIX18_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HEZ5238254.1"
                     /translation="MPSETARPLYADTCAAHTLVWFRQNLRIRDNAALCTAVAEGLPV
                     IGIWIDDAETDNPRRAAFYRQSAAELAQGLAGRGIPLYTAASPAELVRLAVRLNIRAV
                     IADESHTFADKLADNALWHELDKHGIALTFVNDRAVFGKTDLIPDGGTAHTDFDRYRE
                     VWLDRFSKQPPAGPNLFAAYRQPFPENLSAPPPAALSDGIFLPQNSGETAAWRQWRRF
                     LEQADSYSVLKDFPSRKHTSLMGAYLSAGCISPRLLARESLERRLNAWADNIIRRDFF
                     LQLALQHTDDGPSDGNPEHTLRLTLWQQGQTGIPIIDAAMRCLHKTGSLHPALRRLSA
                     DFFCHVLNLPRREGEIWFARQLTDFDAAINQGNWWLAASRHTCPDIAAASYRTDPDGT
                     FIKRHIPELAHLSADTVHTPWRFACSVDTHGYPAYPVAGIP"
     gene            complement(7488..7712)
                     /locus_tag="WIX18_001142"
     CDS             complement(7488..7712)
                     /locus_tag="WIX18_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238255.1"
                     /translation="MVFWLQRLKYPLLLWIADMLLYRLLGGAEIECGRCPVPPMTDWQ
                     HFLPAMGTVAAWVAVIWAYLMIESEKNGRY"
     gene            7815..9965
                     /gene="dinG"
                     /locus_tag="WIX18_001143"
     CDS             7815..9965
                     /gene="dinG"
                     /locus_tag="WIX18_001143"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HEZ5238256.1"
                     /translation="MLTDLEKNAIRDHYQNIGKNLPGFRPRASQREMIAAVANAFSRT
                     LAREEGGEPPKREGESIAVIEGPTGVGKSLAYLLAGGIMAQTRGKRLIVSSATVALQE
                     QLVDRDLPFLVEKSGLELTFALAKGRGRYLCPYKLYQLTQSNAQQNLLGFEAPAVLWD
                     SKPKPEELKLLRDIADEFSARRFNGDRDTWPEKIDDAIWLKVTNDRHGCLKTACPNRP
                     ECPFYLARDVLETVDVVVANHDLLLADISMGGGVILPAPENSFYCIDEAHHLPKKALS
                     RFAAEHSWNIAVWTLEKLPQLTGKIAALTDKAELANLADEAASSLLDSLHEWQFHLAE
                     EPSLSLGPSENDRRTNSEPTWLWEDGKIPEGLETTVSNTAIAARSLLKHVVGLNDALS
                     AARREKEQDGALLDRLTGEFGIFIARIEQISAVWDLLSTVPIEGEEPLAKWITRRADD
                     KNDYIFNASPISSASHLANSLWRRAAGAVLTSATLQSLGNFNLMLRQTGLQWLPETTT
                     LALKSPFDFEKQGELYIPPIYASPKDPEAHTAAVIEWLPKLISPTEAIGTLVLFSSRK
                     QMQDVALRLPGDYLPLLLVQGELPKAVLLQKHHRAIEEGKASIIFGLDSFAEGLDLPG
                     TACVQVIIAKLPFAMPDNPIEKTQNRWIEQRGGNPFIEITVPEAGIKLIQAVGRLIRT
                     EQDYGRVTILDNRIKTQRYGQQLLAGLPPFKRIG"
     gene            10001..10612
                     /locus_tag="WIX18_001144"
     CDS             10001..10612
                     /locus_tag="WIX18_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HEZ5238257.1"
                     /translation="MNFTRLLNQVLSTVQKKGNTFSDSPLNSFGGGALVAGVASMLLN
                     GKNRKTITKIGSTAALGYLAYRGYQMWQQNKGQATVTQSDFQPAGETEETYSRTVLRT
                     MIAAASDGMIDEAERRTIEQESGTDPETAAWLAAEYRLPASIGDIATAVGNDEALAAE
                     AYLAARLVCADLSRKETVFLARLSQALKLDDNLVESLERQLGF"
BASE COUNT         2517 a         3051 c         2709 g         2396 t
ORIGIN      
        1 ctattttcaa acggccttta ctcattcaat cctcaactta ttgcggcttt ttctgctctt
       61 cgcgtacttt atccaccaac tggtcaatcg tggtcatacc ggactgccag tctttaaatt
      121 caacttggta tttgccgccg acgatcacag tcggtgtgcc gctgatttgg aatttattgg
      181 tcaactcttc catttgagcc gcacgcgctt ggctttcaga agcctcaaat gcagccaata
      241 cttttttgcc gtcaaacgct gtttgctcgg acagccattt tttcagggta tcggtatcgg
      301 ccagattgat tttttgatta accatcgcat cgaaaatatg gctgttggct ttatctgatt
      361 caccggccat ttccactgcg gccgccaaac gtgccaaagg tttcatttca tcaccccaca
      421 cgacatgctc ccggcgcata taggtatcgt ctttaaacgt tttgatgtgc tcgctcaaga
      481 ccggctcaag atgggcgcaa tgcgggcaga agtagccgaa aaattccaag acttcgactt
      541 tgccggcctg ctgttgcggg ataggcgtgg acaatacagt gtagttcacg ccttcggtca
      601 atggggctgg ggctgccgga gcagatgagc tgctttggac gctgtctgcc ggaacgctgg
      661 tttcagcctg tttgctacaa gcggccaatg ccaacagggt caatgaagtc aaagctaagg
      721 ttttcagttt cataggtatc tcttgtgtgt cagattaatg tgcggatttt atgacatttt
      781 attgaaggcg tgttcgattt gagtgaaaaa atgtgtttag ttttatttca gcctttataa
      841 aggccgtctg aaatatggct tagataatta gccttatttt cagacggcct ttgttctagt
      901 aatttacggt ttcggacatt ttgtcttcaa tccgtcgatg tgttccatta agtcaggtgg
      961 gacatgattc cacataggat caagaataaa atcgatacct tcccgtctgg ctaatttggc
     1021 tgctgggaca aaatcggaat caccagaaaa caagatgatt ttatcggctt gtttttttaa
     1081 ggtaatagat gaaatatcca agcctatacg catatctaca cctttttgtt taacatcgag
     1141 cacgacatcg ttttccgtaa tttgagttga cgggtttttc agaagatttt tcatgacttg
     1201 gggttttaat atccatgctg tattgtccga cagcttgcct aaacgtaacg ctaatttacg
     1261 cttcttcttc aattcggtat gcagattgca acgaaatatg gcttccggag tctttgaaaa
     1321 atctatggca cgatgagata cgggattgtg cattttcttt tcaaacggca cgcagtcgta
     1381 aaagaaaatt ctatataaat catccatttg atctgtgccg ttgattttat ctttcagatg
     1441 cagcatcgaa tatcggaaag ccaaatcagc aattcttttt gcatcgtgtg gattttgaga
     1501 caggcctaat gaccgtaccc gcttaataaa aaatgcaccg tcaatcaaaa tggcggtttt
     1561 catattgctt cccctatatt tgtcaaagat ataaaaaagc ccttgggatc ggcatacccg
     1621 ctatgattta atgggtaatg cgtactgcca agggcactat ttctttttgg attatactga
     1681 tgtagataaa gcctgtcaaa aagttcgtat gctgaattta cggattatca ggattttcag
     1741 acggcctttg cctgatttca tcagaaacgg taatttaccc gggcagtata gccgcgcgga
     1801 ttacccggca tagagtccga acgccaatat ttttgattga acagattggc tgcggcaaag
     1861 gtaacgttaa catttttatg gttccagcca agcatggcat caactcgggc aaagcctgga
     1921 agcgtagtca cttctttatt tcttgagtcg taaccgtagc gtttgcctgt accggttacg
     1981 ccgatttcgc cgtagaggtt ttcggtcggg gtataacgga aaaacaggtt gccggtaacg
     2041 ttgctggtgt tattcaaatg gatgcccact cggtcgggat tttctttgtc ttcaacgact
     2101 ttcgcctgca tcacgcccaa cgaaccgcgc agatagagtt ttttagggat gatttgcccg
     2161 atggcggaca attccacgcc gcgcgaacgg tgtttgccgc taaccgcata aatataaggg
     2221 ttgttttttg gatcggggcg gtagcggata ttgaagcgtt cgatttggta ggcagacaac
     2281 gtagtgctga ggcggtcgtc cagccaactg cttttcacgc cggtttcgta ttggcgggtg
     2341 tactcggggt cggcgttgaa cacggcggaa gacaacgtat cgatgctcaa atagccgccg
     2401 cgtccgccat aaggcgcgaa gcctttgtta tacgaggcgt aaagtgtgtg gacgggattg
     2461 atgttccaca ctgcgccgat gttggggctg aacgagtgtc cgctgtattg gcggctgctg
     2521 ccggtgagtt tgttttcgga attaaaggtg tatttgtcgt aacgaccgcc gaggacgaat
     2581 ttcaaatcgg gcgtggcgga gaagatgttt tgcacaaaga tgccgtagga gtcggctttg
     2641 tggcggtttt gggtgaggat aggctgcaat ctgcccgaag ccggccagct tgctcggtcg
     2701 tatggatcga tggaagcagt aaaggcgcgg ctgtaaccta aggtcgggtt gcggtgttcg
     2761 cggctgtaat ccatgcctac ggtcaagtgg ttttcaaaac ggccgatggt gtagtcgccg
     2821 tttagcgtga aattggacga cagggttttg ttgtcagtct gctgccaggc gtagttacgt
     2881 ttgattaagt tgccattttc gctgcctgca tagaaatgat caaaatcctg cgccgccgtg
     2941 cggtgggcga gctgccattg ggcacgccat ttgtcgttga aggcgtattc aaggtcggag
     3001 cgccaaactt gcagcttgtc tttgacaaaa tcgttccggt gggcgaaccc catgcggtaa
     3061 ggcagtccga agcggtcgta cacggacttg gtcggactgc ggtcgggcgt gcgctccaca
     3121 ttgtcgtagg tgtattgccc cgtccacttc aagccgttgt cgagtttgac ggtaatgctg
     3181 ggcgaaacca tgacattttt gctgtctatg ccgctgcgga acgaattggc gcgcccgact
     3241 tcgccggtga gacggatggc gacgtttttg ttcaacactt cgttaatgtc catattcagg
     3301 ctgcggtttg cccacgaacc gtaaaccgca ccgatgttgc ggctttgttt gaagttggcg
     3361 tatttgctga ccatgttgat gacgccgccg ccgttggtgc ggccgtaaag cacggaagac
     3421 gggcctttca ggatttccac gcgctcgatg ttggcagtac tgcggcgcac ttgtccgctt
     3481 tcgcgcacgc cgtcgcggta aatatcggat gcgtcggctt gaaaaccgcg caggaaaatg
     3541 ctttcgccgc gcatatcgta ggcagcgtcg atgccggcat tgccttcgag gatggaactc
     3601 aaatcgttcg taccgtaatt tttgtttttc tagatattga gcgtatcgat ggtttgcggc
     3661 gtttctttga tgagctgtcc gttgcgggta acggcggctt cgtcgtagtt gatgtagcct
     3721 ttgagtacgc tggtgtcgga ctgtccgacc acggaaacgg tgggcagagt ggcggtgtaa
     3781 tgttcaccat tgtcctgcgt atcggcggca gcaacaggga aggaagcaat aatcagcgtg
     3841 ggtaataaag ctaaatgaaa tgatattttc atttttatac tcaatttaac aaaacaaccg
     3901 aattatattg cctcacggag gaaatgagaa taatttcttt taactatatt gaacatgata
     3961 tttgtaaaca aaggtctcag aatgcggaaa actcgccgcc tgatactgaa aaatgccgtc
     4021 tgaacagggt tcagacggca tttttttgac cgcgaaatta tgcgccgaac actttcaaac
     4081 gttctgcaac gggttcaaag gtcttttcac ctgccgcccc ttcaataccg ccgataacca
     4141 tttgtgcgcg caacaaccag ttttcgggga tattccacgc tttggcaatc gccgcatcgg
     4201 gcaagggatt gtaatgttgc aggtttgcac ctacgccgac cgcggcaagt gtcgtccaaa
     4261 cggcatactg caccatcgcg ttcgcctggt ccgcccaaac gggaaagttg gcggcataag
     4321 cagggaactg ctcctgcaaa cctttgacga cattttgatc ttcataaaac aaaatagttg
     4381 ccgcacccgc cttaaacagg ttcaattttt gcgcggtcgg ttcaaaactg tcggcaggca
     4441 cgacggcaca cagcgcgtct tcgacaaatt gccacacctt atcatgctct tcgccaaaca
     4501 gcacgaccac acgggcagat tgggaattga acgaagaagg tgtgtgcaaa acggcgtgtt
     4561 cgacgatttg gacgatttca tctttgccga cgggcagatt tttatttaac gaataaatgg
     4621 aacggcggct ttcggcagcc tgttgcagag attgacgggt catttctttt cctcaaaaac
     4681 attcaacaaa atacacttta ggcagtccga ttcaggcttt acgcttgaaa aacagcctgt
     4741 ccagcgacca tgctccgccg cccgccgccg cgatatagag gaatacgaag cagaacagca
     4801 ctgcggactc gccgccgttg gcaatcggga acaaagcatt tccggaagcg tgcgccataa
     4861 aataggcaac cgccatctgg ccggacaaaa caaacgcggc agggcgcgca aacaggccca
     4921 acaccagcaa aatgccgccg acaatttcta aaataccggc aagcagcaac agcccgccgg
     4981 gcgaaccgct gcccatttca atggggaagg cgaagatttt cgacgtaccg tgcaacaaaa
     5041 acaggtaggc ggttacgata cgcaaaacag aaagcaaaac cggttggata cggttgcagc
     5101 aatcggacat aaaagctcct ttgatatttg tcttcatttc aggcggtaga gtatagatgt
     5161 ttcccctttt caaatatata ctgcttttat tgatacaact tttccacaca agaaaatatg
     5221 gacaccctgt tcagcctcaa ggttttccgc caagtcgtcc aaagcggcgg cttcacccgc
     5281 gccgccgacg cgctcggcat ctccaccgca atggcaagca aacacgtcag ccacttggaa
     5341 aacaccgtcc aagccaaact cctgcaccgc aacagccgca acctcagcct gaccggagcc
     5401 ggggaagaat actaccggca atgcagttac gcgctcgaca cgctcgacga tgccgcgcaa
     5461 aaagccgccg gggggacgga aaaaccgcag gggctgctgc gcgtaacgat gccgctgtgg
     5521 tttgccggca gccagatatg caactggctg gcggaatacc gcgaacgtta tcccgaagtg
     5581 gcattagaac tgattttgga caaccgccac gtcgatttga ttgccgaagg cgtggatttg
     5641 gcgttgcgcg tttcccaaac cctgtccccg tcactgattg cgcgcccact ggcggaaatc
     5701 gaatttgccc tgcttgcctc gcccgacttc ctgaggcgca acggcgtgcc ggaaacgccg
     5761 gaagaagtgg cggggctgcc cgccgtcctg ccgacctaca ccaaccagca gaaactcgac
     5821 ctcacccgca aatcggacgg caaaaaatac cggcttgaac tgacccccgt catccgtacc
     5881 gacaacacgc tgatgatgcg cgaaatgatt aaggcgggcg cgtgcatcgg ttatcagccg
     5941 ctttgggcgg cggaacacga tttgcgctgc ggcacgctgg tgaggctgct gcccggatac
     6001 gccgtcccga ccgaccggct gaatgccgtt tatgcagaca gggcattctt aagcgcgaaa
     6061 gtccgcagct tcatcgattt tctgaacgaa aaaatcgcca gcaggaaagg ctgccgaaat
     6121 gccgtctgaa accgcccgcc ccctttatgc ggacacgtgc gccgcacaca cgctcgtctg
     6181 gttccgccaa aacctccgca tccgcgacaa cgccgcctta tgcaccgccg ttgccgaagg
     6241 tttgcccgtt atcggtattt ggattgacga tgccgaaaca gacaaccctc gccgcgccgc
     6301 gttctaccgc caatccgccg ccgaactcgc ccaagggctt gcagggcgcg gcatcccgct
     6361 ctacacggcg gcatcgcctg ccgagctcgt ccggctcgcc gtccgcctca atatccgcgc
     6421 cgtcatcgcc gacgaatccc atacttttgc cgacaaactc gccgacaacg ccctttggca
     6481 tgaattggac aaacacggca tcgcgttaac cttcgtcaat gaccgcgccg ttttcggcaa
     6541 aaccgacctg atacccgacg gcggcacggc acacaccgat ttcgaccgct accgcgaagt
     6601 atggctcgac cgcttttcca agcagccccc cgccggtccg aacctattcg cggcataccg
     6661 ccaacccttc cccgaaaacc tttccgcccc gccgcctgcc gccctttcag acggcatctt
     6721 cctgccgcaa aacagcggcg aaacggcggc ttggcggcag tggcggcggt ttctcgaaca
     6781 ggcggattcc tactccgttt taaaggattt cccctcgcgc aaacacactt cgctgatggg
     6841 cgcgtatttg agtgccggct gcatctcgcc gcgcctgctc gcgcgggaaa gcctcgaacg
     6901 ccgtctgaac gcgtgggcgg acaacatcat ccgccgcgat tttttccttc aacttgcctt
     6961 gcagcacacg gatgacggcc cttcagacgg caatccggaa cacaccctgc gcctgacgct
     7021 ttggcagcag ggccagaccg gcattccgat tatcgatgcc gcgatgcgct gtttgcacaa
     7081 aaccggcagc ctccaccccg ccctgagacg cttgagcgcg gattttttct gccacgtttt
     7141 aaacctcccc cgccgcgaag gcgagatatg gtttgcccgg cagctgaccg atttcgatgc
     7201 ggcaatcaac caaggcaact ggtggcttgc cgcctcacgg cacacctgcc ccgacattgc
     7261 cgccgcctca taccgtaccg acccggacgg tacttttatc aaacggcaca ttcccgaact
     7321 cgcccacctg tccgccgaca ccgtccacac gccttggcgg tttgcctgtt cggtcgatac
     7381 ccacggctat cccgcctatc ctgtcgccgg tattccctaa gcggtacggc aacctaaaac
     7441 aaatgccgtc tgaacttccg tttcagacgg cattgcgtcc gaatgactca atatcttccg
     7501 tttttttcac tttcaatcat caggtatgcc caaatcaccg ccacccaagc cgccaccgtt
     7561 cccatcgccg gcaaaaaatg ctgccaatcc gtcatcggcg gcacagggca acggccgcat
     7621 tcgatttccg cgccgcccaa caaccggtac agcaacatat ccgcaatcca aagcaacaac
     7681 gggtatttca aacgctgcaa ccaaaaaacc aaccacgtcc gcacgattca cctcaccccc
     7741 cattccgaca acgatattgt accgcttccg tgcaatgtta aaataagccc acttctaccg
     7801 ccgtacaaaa cgccatgctc accgatttag aaaaaaacgc catccgcgac cattaccaaa
     7861 acatcggcaa aaacctgccc ggtttccgtc cgcgcgcttc gcagcgggaa atgattgcgg
     7921 cggttgccaa cgctttttcg cggacgttgg cgcgcgaaga aggcggcgag ccgcccaagc
     7981 gcgagggcga gagcatcgcc gtaatcgaag ggccgaccgg cgtgggcaaa tcgcttgcct
     8041 acctgctggc gggcggcatc atggcgcaga cgcgcggcaa gcggctgatt gtgagcagcg
     8101 caacggttgc cttgcaggag cagttggtag accgcgacct gccgtttctg gtcgaaaaaa
     8161 gcggtttgga actgaccttc gcacttgcca aagggcgcgg ccgctatctc tgcccctaca
     8221 aactctatca actgacgcaa agcaatgccc agcaaaacct gctcggcttt gaagcccccg
     8281 ccgtcttgtg ggacagcaaa cccaagcccg aagaattgaa gctgctgcgc gacatcgccg
     8341 acgaattttc cgcccgacgg ttcaacggcg accgcgacac ttggccggaa aaaatcgatg
     8401 acgcgatttg gctcaaagtg accaacgacc gccacggctg cctgaaaacc gcctgtccca
     8461 accgtccgga atgtccgttt tacctagcac gcgatgtctt ggaaaccgtc gatgtcgtcg
     8521 ttgccaacca cgatcttctg cttgccgaca tcagtatggg cggcggcgtg attctgcctg
     8581 cgcccgaaaa cagtttctat tgcatagacg aagcgcacca cctgcccaaa aaagccctca
     8641 gccgttttgc cgccgaacat tcatggaata ttgccgtttg gacgctggaa aaactgccgc
     8701 agctgaccgg caaaattgcc gcgcttaccg ataaagccga acttgccaac cttgccgacg
     8761 aagccgcctc atccttactc gacagcctgc acgaatggca gttccatttg gcggaagagc
     8821 cgtctttgag cttggggccg tctgaaaacg acaggcggac caacagcgaa ccgacttggc
     8881 tgtgggaaga cggtaaaatc cccgaaggcc tcgaaaccac cgtttccaat acggccattg
     8941 ctgcgcgcag cctgctcaaa cacgttgtcg ggctgaacga tgcgctttcc gccgcgcgcc
     9001 gcgaaaaaga acaggacggc gcgctcctcg accgcctgac cggcgagttc ggcatcttca
     9061 tcgcccgtat cgaacaaatc agcgcggttt gggatttgct ctctaccgtt cccattgagg
     9121 gcgaagagcc gttggcgaaa tggataaccc gccgcgccga cgacaaaaac gactacattt
     9181 tcaacgccag ccccatcagc agcgcgtccc acctcgccaa cagcctgtgg cggcgtgcgg
     9241 caggcgcggt gttgacctcc gccaccctgc aatccttggg caactttaac ctgatgctgc
     9301 gccaaaccgg gctgcaatgg ctgcctgaaa ccaccaccct cgccctcaaa agcccctttg
     9361 actttgaaaa acagggcgaa ctctacatcc cccccatata cgccagcccc aaagaccccg
     9421 aagcacacac cgccgccgtc atcgagtggc tgcccaagct tatttcgccc accgaagcca
     9481 tcggcacact cgtcctgttt tcctcgcgca aacaaatgca ggatgtcgcc ctgcgcctgc
     9541 ccggagacta cctgccgctc ctgctcgtac aaggcgaatt gcccaaagcc gtcctcctgc
     9601 aaaaacacca ccgggccata gaagaaggca aagccagcat catcttcgga ctcgacagct
     9661 ttgccgaagg actcgacctg cccggcaccg cctgcgtgca agtcattatc gccaaactcc
     9721 ccttcgccat gcccgacaac cccatcgaaa aaacccaaaa ccgctggata gaacagcgcg
     9781 gcggcaaccc cttcatcgaa atcaccgtcc ccgaagccgg catcaaactc atccaggctg
     9841 tcggccgcct catccgcacc gaacaagact acggccgcgt aaccatcctc gacaaccgca
     9901 tcaaaacaca gcggtacggc caacaattat tagccggcct gccaccgttt aaaaggatag
     9961 ggtaaaccta ccgcccttcc cgcaacagaa aggaaaagtc atgaacttca cccgactgct
    10021 caaccaagtc ttaagcacgg ttcaaaaaaa aggcaacaca ttctccgaca gcccgctcaa
    10081 ttcattcggc ggaggcgcgc tggttgccgg tgtcgcctcc atgctactga acggtaaaaa
    10141 ccgcaaaacc atcaccaaaa tcggttcgac cgccgctttg ggctacctcg cctaccgggg
    10201 ctatcagatg tggcagcaaa acaaagggca ggcaaccgta acacaaagcg atttccaacc
    10261 tgccggagaa actgaagaaa catacagccg caccgtattg cgcaccatga tagccgccgc
    10321 ttcagacggc atgatagacg aagccgaacg ccggactatc gaacaggaaa gcggcacaga
    10381 ccccgaaact gccgcatggc tcgccgccga ataccgcctg cccgcaagca tcggggacat
    10441 cgccaccgcc gtcggcaacg atgaggcgtt ggcggcggag gcctatctgg cggcaaggtt
    10501 ggtctgtgcc gatttgtcgc ggaaagaaac cgtcttcctc gcccgcctgt cgcaggcttt
    10561 gaaactggat gacaatctgg tggagagttt ggaaaggcaa ttggggtttt gatgacacag
    10621 ctggggaggg aaaatcatca aaaaacggtt attccgaccc cggcctcaaa acg
//
LOCUS       DAWITQ010000059        10662 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.059, whole genome shotgun sequence.
ACCESSION   DAWITQ010000059 DAWITQ010000000
VERSION     DAWITQ010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10662)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10662)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10662
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.059"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(19..228)
                     /locus_tag="WIX18_001145"
     CDS             complement(19..228)
                     /locus_tag="WIX18_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238258.1"
                     /translation="MDTTLKHKAEALLGEPLLDEPVRPESWECCGSDCGEACIQTIYW
                     ADKARYDAQRRKLKEAGWSEDENAV"
     gene            complement(206..571)
                     /locus_tag="WIX18_001146"
     CDS             complement(206..571)
                     /locus_tag="WIX18_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEZ5238259.1"
                     /translation="MAAYGVSDGIFTEQAVRIHRWFCGNFGYGGGRCYNNGLFLQGNI
                     MEATVYLEDNEYIALCDLLKLAGLAESGGQAKAFIAEGLVSRNGETETRKTAKIRGGE
                     VIEFDGARLEIADGYDPEA"
     gene            971..4405
                     /gene="dnaE"
                     /locus_tag="WIX18_001147"
     CDS             971..4405
                     /gene="dnaE"
                     /locus_tag="WIX18_001147"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEZ5238260.1"
                     /translation="MTEPTYIPLRLHTEFSITDGMVRIKKLIAKAQEYGLPALGISDL
                     MNEFGLVKFYKACRSAGIKPIGAADVWIGNPNAPDKPFRAMLIIRNDAGYLRLSELLT
                     EAYVGKDRNVHHAELNPEWLDNGDNSGLICLSGAHYGEVGVNLLNGNEDAARAAALKY
                     AAWFPDAFYLELQRLPERPEWEACVSGSVKLAEELGLPVVATHPTQFMSRDDFNAHEA
                     RVCIAGGWVLTDKKRPRDFTPSQFFIPPETMAERFADLPEALENTVEIAKRCNLHITL
                     GKNFLPLFPTPDGLSLDDYLVKLSNEGLQERMVQLYPDEAERAAKMPEYQERLDFELN
                     IIIQMKFPGYFLIVQDFINWAKTHGCPVGPGRGSGAGSLVAYSLKITDLDPLKYALLF
                     ERFLNPERVSMPDFDVDFCQANRGRVIEYVREKYGAEAVSQIVTFGTMSSKAVIRDVG
                     RVLELPFMLCDKLSKLIPLEANKPLSLEKAMETEPQIQELIEAEEADELITLAKKLED
                     LTRGLGMHAGGVLIAPGKISDYSPVYQADESASPVSMYDKGDVEDVGLVKFDFLGLRN
                     LTIIEMAQNNIKSTTGDIVDVGKIPLDDQVAYQIFRDANTTAVFQFESTGMKKMLKTA
                     HTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQYIHPLLEGILAPTYGIMVYQEQ
                     VMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIFAEGAAKQGISREKSDEIFNY
                     MEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATMSSELDNTDQLKHFYDDCR
                     ANGIEFLPPDINESDYRFTPYPDMKIRYALGAIKGTGEAAVESITAARQSGGKFTGLL
                     DFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMDNADQKAANANQGGL
                     FDMMEDAIEPVRLIDAPMWSESEKLAEEKTVIGFYLSGHPFGPYAQEVRQIAPQKLSK
                     LKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDLSGQVEIMVGGQTLENCADCLKADQ
                     VLIIESKVSRDDYGGGDGLRILANQVMTLQTARERYARSLSLALAPHHDIGKLVQLLA
                     AHQLPDTPRIPLQLSYANEKASGRLQVPPKWTVTPSSALFGELETLLGSRSVRVNW"
     gene            4553..4702
                     /locus_tag="WIX18_001148"
     CDS             4553..4702
                     /locus_tag="WIX18_001148"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238261.1"
                     /translation="MHDTDSTKGKNGIFQSIGIKTALSLQKYQIDKPGKEIRPCRLKK
                     RPPVR"
     gene            complement(4839..5771)
                     /locus_tag="WIX18_001149"
     CDS             complement(4839..5771)
                     /locus_tag="WIX18_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEZ5238262.1"
                     /translation="MLSQLEYGIAKENRPNRQADRFAGSVLPLAASLTHKPNIMKPIP
                     TDTFQPAILPQAFETEIKSTCTGRIYRIQTATLGEMPSEGYPVLFVLDGEAFFPALFN
                     IMQSLMPNPVTRSNAPCLIVGIGYTTGSVRDLAQRAADYTPPLGDNATADERQQFGQA
                     DRFSAFIDSELTAFLESRYTLNRNETAVFGHSFGALFGLYSLLSHRRFRRHWLVSPSI
                     WWHNRRILDFMPSENRLNGIDVCLNIGALERGSGCKRREERDMAGLSERMAAELDRHG
                     AAVFFREYPNADHGNVSFYSLTDCVEYLRKAWQR"
     gene            complement(5841..7997)
                     /locus_tag="WIX18_001150"
     CDS             complement(5841..7997)
                     /locus_tag="WIX18_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HEZ5238263.1"
                     /translation="MSVFRINMTAATVLAALSSSVFAAQTADLETVHIKGQRSYNAIA
                     TEKNGDYSSFAATVGTKIPASLREIPQSVSIITNQQVKDRNVDTFDQLARKTPGLRVL
                     SNDDGRSSVYARGYEYSEYNIDGLPAQMQSINGTLPNLFAFDRVEVMRGPSGLFDSSG
                     EMGGIVNLVCKRPAKAFQGHAAAGFGTHKQYKAEADVSGSLNSDGSVRGRVMAQTVGA
                     SPRPAEKNNRHETFYAAADWDINPDTVLGAGYLYQQRHLAPYNGLPADANNKLPSLPQ
                     HVFVGADWNKFKMHSHDVFADLKHYFGNGGYGKVGMRYSDRDADSNYAFAGSKLGMKT
                     PAGRPGCNTADDKACAVGLGTEIKQKALAFDASYSRPFRLGNTANEFVIGADYNRFRS
                     TNEQGRTTLYARGGLALNEFRSIPQVDLIANARKGVRGYSHTVATENLDEFGIYGKST
                     FHPADGLSLIGGGRLGHYKIESGEGKTLHKASKTKFTGYAGAVYDLNDNNSLYLSLSQ
                     LYTPQTNLDADGKLLKPRQGNQFEVGYKGSYMDDRLNARVSFYRMKDKNAAAPLNPNN
                     KKTRYAALGKRVMEGVETEISGAVTPKWQIHAGYSYLHSQIKTASNSRDDGIFLLMPK
                     HSANLWTTYQVTPELTIGGGVNAMSGITSSAGMHAGGYATFDAMAAYRFTPKLKLQIN
                     ADNIFNRHYYARVGGANTFNIPGSERSLTANLRYSF"
     gene            8157..8816
                     /locus_tag="WIX18_001151"
     CDS             8157..8816
                     /locus_tag="WIX18_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEZ5238264.1"
                     /translation="MTTPKLIIFDWDGTLADTTQPIIDTMRRSFAECGFPPPEAERVR
                     SLIGYSLPEIIRDLLEMPSETAIADITRTYSAHYLNPNNRNMTLFPDALPCLDKLKAQ
                     GYWLAVATGKGRAGLDNAISQTATGGYWLATACAGEYPSKPSPEMVFGICGELGFDPK
                     EALVVGDTAHDLHMAANAGAAAVGVATGAHSREQLLSAPHLAVLDGLSELPGFLAQHY
                     A"
     gene            complement(8903..9871)
                     /gene="ispH"
                     /locus_tag="WIX18_001152"
                     /gene_synonym="lytB"
     CDS             complement(8903..9871)
                     /gene="ispH"
                     /locus_tag="WIX18_001152"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEZ5238265.1"
                     /translation="MNEKTIILANPRGFCAGVDRAISIVERALEEFGAPIYVRHEVVH
                     NKFVVDNLREKGAVFIEDLAEVPPGATLVYSAHGVSKAVRQEAAERGFRVFDATCPLV
                     TKVHKEVARLDAQDCEIIMIGHKGHVEVEGTMGQLAPGKMLLVETVGDVAKLEVRNPD
                     KLAYVSQTTLSVDETKDIIAALNARFPNIRNPHKEDICYATTNRQTAVKELAEQCDIV
                     IVVGSPNSSNSNRLREVAAGIGTDAYMVDNAGYLQRAWFEGKNKVGVTAGASAPEVLV
                     QEVLATIRGWGHETVREGEGAEESIVFVLPKELRREGETKPDLCKR"
     gene            complement(9901..10395)
                     /locus_tag="WIX18_001153"
     CDS             complement(9901..10395)
                     /locus_tag="WIX18_001153"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein signal peptidase"
                     /protein_id="HEZ5238266.1"
                     /translation="MSSSVSSKTRYWVLALAAIVLDQWSKWAVLSSFQYRERVNVIPS
                     FFDLTLVYNPGAAFSFLADQGGWQKYFFLVLAVAVSAYLVRAILRDEFAALGKTGAAM
                     IIGGALGNVIDRLIHGHVVDFLLFYWQNWFYPAFNIADSFICVGAVLAVLDNIVHRKD
                     GKKT"
BASE COUNT         2409 a         3023 c         2854 g         2376 t
ORIGIN      
        1 tatcaagccg aaccgttttc agacggcatt ttcgtcttcc gaccaacctg cttctttcaa
       61 tttccgccgt tgcgcgtcgt agcgggcctt atctgcccaa taaatcgtct gaatgcacgc
      121 ctcgccgcag tcgctgccgc agcattccca cgactcgggg cggacgggtt cgtctaaaag
      181 cggctcgccc aaaagggctt cggctttatg cttcagggtc gtatccatct gcgatttcca
      241 agcgtgcgcc gtcaaactcg atgacttcgc cgccgcgtat tttggcggtt ttacgggttt
      301 cggtttcgcc gttgcgcgac accagccctt cggcgataaa cgctttcgcc tgtccgccgc
      361 tttcggcaag tccggccaat ttcaagaggt cgcacaaggc gatgtattcg ttgtcttcga
      421 gatagacagt ggcttccata atgttccctt gcagaaagag cccgttattg tagcacctgc
      481 cgccgccgta cccaaaatta ccgcaaaacc agcgatgtat ccgcaccgcc tgttccgtaa
      541 aaatgccgtc tgaaaccccg tatgccgcca gccggtcaaa gaaatcctgt ccggcggcag
      601 gctgcaaatc ctgttccccg acgaatccgc attgacgatg acgcacctcc tcaaacgcga
      661 actgcccgat acaccggcaa tcggcatcaa aacgaaatca aaaacctgtt tgaacgtaaa
      721 attaatttaa ctgcttgcca tccgtccgaa taaggtatat agttccttat aactagtttg
      781 atagtccttt atatctatca atactccttg ggaagcctcc accacacggt aggaggcatt
      841 tttttgccgt cgtaaaagct caaaaacatt tgcaggtcat gccgtctgaa tctgaaacag
      901 cattacctac accgccatct aaagacaacc ctgctacaat acgcctttta ttgtccacgc
      961 cgattttgcc atgaccgaac cgacctacat cccgctgcgc ctgcataccg aattttcgat
     1021 taccgacggt atggtgcgga ttaaaaaact gattgccaaa gcgcaggaat acggtttgcc
     1081 tgctttgggc atcagcgatt tgatgaacga attcggtttg gtgaaatttt ataaagcctg
     1141 ccgcagcgcg gggattaagc ctatcggcgc ggcggacgta tggataggca atccgaatgc
     1201 gcccgacaag ccgtttcgcg ccatgctgat tatccgcaac gatgcgggtt atctgcgctt
     1261 gagcgagctt ttgacggagg cttatgtcgg caaagaccgc aatgtccatc acgcggaact
     1321 caatcccgaa tggctggaca acggcgacaa cagcggcttg atttgtttga gcggcgcgca
     1381 ttacggcgaa gtgggcgtga atctgttgaa cggcaatgaa gatgcggcgc gtgcggcggc
     1441 gttgaaatat gcggcgtggt ttcccgatgc gttttatctg gagctgcaac gcctgcccga
     1501 acgccccgaa tgggaggctt gcgtttcggg cagcgtgaag ctggcggagg aactgggttt
     1561 gccggtggta gcgacgcatc cgacgcagtt tatgagccgc gacgatttca acgcgcacga
     1621 ggcgcgggtg tgcatcgcgg gcggctgggt attgacggac aaaaaacgtc cgcgcgattt
     1681 cacgccgagc cagtttttca ttccgccgga aaccatggcc gaacgtttcg ccgatttgcc
     1741 cgaggccttg gaaaacacgg tggaaatcgc caaacgctgc aacctgcaca tcacattggg
     1801 caaaaacttc ctgccgctct tccctactcc ggacggcctg tcactggatg attatttggt
     1861 gaaactgtcc aacgagggtt tgcaggaacg catggttcag ctttatcccg acgaggcgga
     1921 gcgtgcggca aaaatgccgg aatatcagga acgtttggat tttgagctga acatcatcat
     1981 ccagatgaaa ttccccggct atttccttat cgtacaagac tttatcaact gggcgaaaac
     2041 gcacggctgt ccggtcgggc cgggccgtgg ttcgggcgcg ggttcgctgg tggcgtattc
     2101 gctgaagatt accgacctcg acccgctcaa atacgcgctg ctgttcgaac gtttcttaaa
     2161 ccctgaacgc gtttccatgc ccgactttga cgtggacttc tgtcaggcaa atcgcggccg
     2221 cgtgattgaa tatgtgcgcg aaaaatatgg cgcggaagca gtcagccaaa ttgttacctt
     2281 cggcacaatg tcgtccaaag cggtgattcg cgacgtgggg cgtgtgctgg aactgccgtt
     2341 tatgctgtgc gacaaactgt ccaagctgat tccgttggaa gccaacaaac ccctgagttt
     2401 ggaaaaagcc atggagaccg agccgcagat tcaggaattg attgaagcgg aagaagcgga
     2461 cgaactgatt acgttggcga aaaagctgga agatttaacg cgcggtctgg gtatgcacgc
     2521 gggcggcgtg ttgattgcgc cgggcaagat ttccgattac agccccgtgt atcaggcgga
     2581 cgaatccgcc tcgcccgtat ccatgtacga taaaggcgac gtggaagatg tgggtttggt
     2641 gaaattcgac tttttgggcc tgcgcaacct gaccattatc gaaatggcgc agaacaacat
     2701 caaaagcacc accggcgata tcgtcgatgt cggcaagatt ccgcttgacg accaggttgc
     2761 ctaccaaatc ttccgcgatg cgaacactac cgccgtattc cagttcgagt cgaccggcat
     2821 gaagaaaatg ctgaaaacgg cgcatacgac caagtttgaa gaactcatcg ccttcgtgtc
     2881 gctctaccga cccggcccga tggacaacat ccccgacttc gtcgcgcgta tgaaggggca
     2941 agaattccaa tacatccatc cgctactcga aggcatcctc gcgccgacct acgggattat
     3001 ggtgtatcag gaacaagtga tgcaggcggc gcagattatc ggcggctact cgctcggcgg
     3061 tgcggacctg ctgcgccgcg ccatgggtaa gaaaaagccc gaagaaatgg tgaaacaccg
     3121 cgaaatcttc gccgaaggtg cggcaaaaca aggcatttca cgcgaaaaat ccgacgaaat
     3181 cttcaactac atggaaaaat tcgccggcta cggtttcaac aaatcccacg ccgccgccta
     3241 cgccctgatt tcctatcaga ccgcatggct caaagcccac taccccgccg aatttatggc
     3301 ggcgaccatg tcgtccgaat tggacaacac cgaccagctc aagcatttct acgacgactg
     3361 ccgtgccaac ggcatcgagt tcctgccgcc cgacatcaac gaatccgact accgcttcac
     3421 gccgtatccg gacatgaaaa tccgctacgc gctcggcgcg attaaaggca cgggcgaagc
     3481 cgccgtcgaa tccatcaccg ccgcgcggca aagcggcggc aagtttaccg gcctcttgga
     3541 cttctgtgag cgcgtcggca aagaacacat gaaccgccgc accctcgaag ctctgatacg
     3601 cggcggcgca ttcgacagca tcgaacccaa ccgcgccatg ctcttggcga acatcgacct
     3661 cgctatggac aacgccgacc aaaaagccgc caacgccaat cagggcgggc ttttcgacat
     3721 gatggaagac gccatcgaac cggtgcggct catcgacgcg ccgatgtgga gcgaatcgga
     3781 aaaactcgcc gaagaaaaaa ccgtcatcgg cttttacctg tccggccacc cgttcggccc
     3841 gtatgcccaa gaagtccgcc aaatcgcccc gcagaaactg tcgaaactca aaccgcaaga
     3901 cagcgtgcgc ctcgccggat tcgttaccgc cgtacgcacc atgatgggca agcgcggcaa
     3961 aatcgccttc gtcagccttg aagatttgag cggacaggtt gaaatcatgg tcggcggtca
     4021 gacgttggaa aactgcgccg actgcctcaa agccgaccaa gtgctgatta tcgaatccaa
     4081 agtcagccgc gacgactacg gcggcggcga cggactgcgt attctggcaa accaagtcat
     4141 gaccctgcaa acggcacgcg aacgctacgc ccgaagcctc agcctcgccc tcgccccgca
     4201 tcacgacatc ggcaaactgg tacaactgct cgccgcccac caactgcccg acacgccgcg
     4261 catcccgctg caactgtcgt atgccaacga aaaagcgtcg ggcaggcttc aagtgccgcc
     4321 gaaatggacg gttacgccga gttccgcatt gttcggcgaa ctggaaacat tgctcggcag
     4381 ccggtcggtg cgcgtcaact ggtaacccaa aatataaatg ccgtctgaag cccaaaaacc
     4441 ggtttcattc gtactttatt cgaatgattg aataaaagta actgccaaga aaaacgtatt
     4501 ttttggttat ttcgccagtc taaatagagc aaccgggacg attgatatcc gtgtgcatga
     4561 cacagacagc accaaaggga aaaacggcat tttccaaagt atcggtatca aaaccgccct
     4621 ttcactccaa aaataccaaa tcgacaaacc gggcaaagaa atcagaccgt gccgcctgaa
     4681 aaaacgccca cccgtccgtt aaattaacct atccctgttt cagacggcct gaagcaggga
     4741 tttttatatc aaaataaaat gagaaaggga gcaataaccc ttaggtagct cttgttattt
     4801 tccgatgcaa aacaaagcag tcatatattt aattccccct acctctgcca agccttcctc
     4861 aaatattcga cgcaatcggt cagcgagtag aacgagacat tgccgtggtc ggcattcgga
     4921 tattcccgga aaaagacggc ggccccgtgc ctgtccaact ctgccgccat gcgttcggac
     4981 agtcctgcca tatcgcgttc ttccctgcgt ttgcaaccgc taccccgttc gagcgcgccg
     5041 atgttgaggc agacatcgat gccgtttagc cggttttcag acggcataaa atcgagtatc
     5101 cgcctgttgt gccaccaaat cgatggggat acgagccaat gccgtctgaa acggcggtgg
     5161 gaaagcaggg aatacagtcc gaacagtgcg ccgaacgagt gtccgaatac ggcggtttca
     5221 ttgcggttga gggtgtagcg gctttctaaa aaggcggtca gctcgctgtc gataaaggcg
     5281 gagaagcggt ctgcctgtcc gaactgctgc cgttcgtctg ctgtggcgtt gtctccaagc
     5341 ggcggcgtgt agtcggcggc acgttgtgcc aaatcgcgca cactgcctgt cgtgtagccg
     5401 ataccgacaa tcaggcaggg ggcgttgctt cgggtaacgg ggttgggcat cagcgactgc
     5461 atgatgttga aaagtgcggg gaaaaaggct tcgccgtcca aaacgaagag gacgggatag
     5521 ccttcagacg gcatttcgcc gagtgtcgcc gtctgaatcc gatagattcg ccccgtgcag
     5581 gtggatttga tttcggtttc aaaggcttgg ggcagtatgg caggttggaa tgtgtcggtc
     5641 ggtatgggtt tcatgatgtt cggcttgtgg gtcagactgg cggcaagcgg taaaaccgaa
     5701 ccggcaaagc ggtctgcctg ccggttcggt ctgttttcct tcgcaatgcc atactccagt
     5761 tgtgagagca tagggtatgc agcgcagctt gttgtggttt gatgatgctg cggctgccgt
     5821 ttcagacggc atattggtct ttaaaaactg taacgcaggt ttgccgtcag gctgcgctcc
     5881 gaaccgggaa tgttaaaggt gttcgcgccg ccgacgcggg cgtagtaatg gcggttgaag
     5941 atgttgtcgg cgttgatttg cagcttcagc ttgggcgtga agcggtatgc cgccatcgca
     6001 tcgaacgtgg cataaccgcc tgcatgcatc cctgcagatg aagtaatgcc gctcatcgcg
     6061 ttcactccgc cgccgatggt cagctcgggc gtaacttggt aagtcgtcca caggtttgcg
     6121 ctgtgtttgg gcatcaatag gaagatgccg tcgtcgcgtg aattggaggc ggttttgatt
     6181 tggctgtgca gatagctgta acctgcatgg atttgccatt tcggtgtaac cgcgccgctg
     6241 atttcggtct caacgccttc catcacgcgt ttgcccaatg cggcgtaacg ggtttttttg
     6301 ttgttcgggt tcaacggtgc ggcggcgttt ttgtctttca tgcggtagaa cgaaactcgg
     6361 gcattgaggc ggtcgtccat gtagctgcct ttgtaaccga cttcaaactg gttgccttgg
     6421 cgcggtttga gcagcttgcc gtcggcatcg aggttggttt gcggtgtgta gagctgggac
     6481 aggctcaggt agaggctgtt gttgtcgttc aagtcgtaaa ccgcgcctgc gtagccggtg
     6541 aacttggttt tgctggcttt gtgcagggtt ttgccttcgc ccgactcgat tttatagtgt
     6601 cccaaacgtc cgccgccgat aagcgacagc ccgtcggcag gatggaaggt ggatttgccg
     6661 taaatgccga attcgtcgag gttttcggta gcgacggtat ggctgtaacc gcgcacgcct
     6721 ttgcgcgcgt tggcaatcaa atcaacctgc ggtatgctgc ggaactcgtt taaagccagg
     6781 ccgccgcgtg catataaagt agtacggcct tgttcgttgg tgctgcggaa gcggttgtaa
     6841 tcggcgccga tgacaaattc gttggccgta ttgcccaagc ggaaaggcct gctgtagctg
     6901 gcgtcaaacg cgagggcttt ttgtttgatt tctgtaccca aacccaccgc gcaggctttg
     6961 tcgtcagccg tattgcagcc cgggcggcct gccggggttt tcatgcccag cttgctgccg
     7021 gcaaaggcat agttggagtc ggcatcgcgg tcggaatagc gcataccgac tttgccgtag
     7081 ccgccgttgc cgaagtaatg tttcaaatcg gcgaacacgt cgtggctgtg cattttaaat
     7141 ttgttccaat ccgcgccgac aaatacgtgt tgcggcaggg acggtaattt gttattggca
     7201 tcggctggca agccgttgta cggcgcgagg tggcgttgct ggtaaagata gcccgcgccc
     7261 aaaaccgtat cggggttgat gtcccaatcc gccgccgcgt agaaggtttc gtgccggttg
     7321 tttttctcgg cgggacgcgg agacgcgccg acggtctgcg ccatcacgcg gccgcgcacg
     7381 ctgccgtctg aattgaggct gcccgatacg tccgcctcgg ctttatattg tttgtgcgta
     7441 ccgaaccctg ccgcagcatg accttggaac gctttggccg ggcgtttgca caccagattt
     7501 acgatgccgc ccatctcgcc gctgctgtcg aacaagccgc tcggcccgcg catcacttcc
     7561 acacggtcga aggcaaacag attgggcagc gtgccgttga tactctgcat ctgcgcgggc
     7621 aggccgtcga tgttgtattc gctgtattcg taaccgcgcg cgtaaaccga agagcgtccg
     7681 tcgtcgttgc tcaacacgcg caggccgggc gttttgcgtg ccaactggtc aaacgtatca
     7741 acattgcggt ctttgacctg ttgattggtg atgatgctga cagattgcgg aatttcgcgc
     7801 aaagaagcgg ggatttttgt gccgacggtg gcggcaaacg agctgtaatc gccgtttttc
     7861 tcggtggcaa tcgcgttgta cgaacgctga cccttaatat ggacggtttc caaatccgcc
     7921 gtttgtgcgg caaaaaccga agacgaaagt gctgccaaaa ccgtggcggc ggtcatattg
     7981 atgcggaaaa ctgacataaa ctgtcccatt cacataaatg ataatggttc tattttaata
     8041 aagcacaacg cggcttgttc ggaaaaacat atcgcgcagc cgacaaattt tgtcgaaaat
     8101 gcgacacgtc tgcgttttcc gcataaaatc tgacttttca ccgtaaacaa cctgccatga
     8161 ccacgcccaa actcatcatc ttcgactggg acggcacgct tgccgatacg acccaaccca
     8221 tcatcgacac catgcgccgc agcttcgccg aatgcggttt tccgccgccc gaagcggaac
     8281 gcgtccgcag cctgattggc tacagcctgc ccgaaatcat ccgcgacctg ctcgaaatgc
     8341 cgtctgaaac cgccattgcc gacatcacac gcacttattc cgcacattac ctcaatccca
     8401 acaaccgcaa tatgacgctc tttcccgatg ccctgccctg tctggacaag ctcaaagcac
     8461 aaggatactg gcttgccgtc gccacgggca aagggcgggc gggtttggac aacgccatca
     8521 gccaaaccgc caccggcggc tattggctcg ccaccgcctg cgcgggggaa tatccctcca
     8581 aaccctcgcc cgaaatggta ttcggaatct gcggcgaact ggggttcgac ccgaaagagg
     8641 cattggtcgt cggcgatacg gcgcatgacc tgcatatggc ggcaaacgca ggcgcggcgg
     8701 cagtcggcgt tgccaccggc gcacattcgc gcgaacagct ccttagcgca ccgcatctcg
     8761 ccgtattgga cggtttgtcc gaactgcccg gttttcttgc acagcattac gcctgattgg
     8821 tttccgcatc cggcactcga aacaaatgcc gtctgaaggt tgttcagacg gcatttgttt
     8881 tgcccaaaca ttcaacgctt gctcaacgtt tgcacaaatc gggtttggtt tcgccctcgc
     8941 ggcgcaactc tttgggcagg acgaacacga tgctttcttc cgcgccctcc ccttcgcgta
     9001 cggtttcatg cccccacccg cgtatggttg ccaatacttc ctgcaccaac acttcgggcg
     9061 cggacgcgcc tgccgttacg ccgactttgt tcttgccctc aaaccacgcg cgttgcaggt
     9121 agcctgcatt gtccaccata tacgcatcgg ttccgatgcc tgccgccact tcgcgcaggc
     9181 ggttgctgtt ggacgaattg ggcgaaccga ccacaatcac gatgtcgcac tgttctgcca
     9241 actctttgac ggcggtttgc cggttggtcg tcgcatagca gatatcttcc ttgtgcggat
     9301 tgcggatatt ggggaaacgc gcgttcagcg cggcgatgat gtctttggtt tcatcgaccg
     9361 agagcgtggt ttggctgaca taggcgagtt tgtcggggtt tctgacttcg agttttgcca
     9421 catctccgac cgtttcgacc aaaagcattt tgcccggcgc aagctgcccc atcgttcctt
     9481 caacctcgac gtgcccctta tgcccgatca tgatgatttc acagtcttgg gcatccagtc
     9541 gggcgacttc cttatgcact ttcgtcacca gcgggcaagt cgcatcaaac acgcggaaac
     9601 cgcgctccgc cgcttcttgc cgcaccgcct tcgatacgcc gtgtgccgaa taaaccagtg
     9661 tcgcgcccgg cggcacttcc gccaagtctt caataaacac cgcacctttt tcacgcaggt
     9721 tgtccacgac gaatttgttg tgaacgactt cgtggcgcac ataaatcggc gcgccgaatt
     9781 cttccaaagc acgttcgaca atactgattg cccgatccac gccggcgcag aagccgcgcg
     9841 gattggcaag gatgatggtt ttctcgttca taagttttgc attccgtgtt cagacggcat
     9901 tcacgttttt ttgccatctt tgcgatggac gatattgtca agcactgcca ataccgcgcc
     9961 gacgcagata aaactgtcgg caatattaaa ggcgggataa aaccaatttt gccaataaaa
    10021 caataagaaa tcgacgacat gaccgtgtat caggcgatcg atgacattgc ctaacgcacc
    10081 gccgataatc atcgccgcac ccgttttgcc gagggctgca aactcatcgc gcaagatggc
    10141 gcgtaccaaa tacgcgctca ccgccaccgc cagcaccaaa aaaaagtatt tttgccagcc
    10201 gccctgatcg gcaaggaagc tgaacgccgc acccgggttg tacaccagcg tcagatcgaa
    10261 aaaggaagga atgacattga cgcgttcccg atactgaaac gacgacagca ccgcccactt
    10321 cgaccactgg tccagcacga tggcggcaag tgccaatacc caatagcgcg ttttacttga
    10381 aacagatgaa gacatatttt tcaacagccg gtaaaagagt accattttac ccgaaaaccc
    10441 cctttcctgt acccgaaacg gcaaatgccg taatcttaaa acccgtcatt cccgacaaca
    10501 ccgtaatctc gaaacccgtc attcccgcgt aggcgggaat ccagacctgt ccgcacagaa
    10561 acttatcgga taaaaacagt tgctcaaacc cctcgttcta gattcccact ttcgtgggaa
    10621 tgacggttca gttgcgttcc aacaacaccg caatctcgaa at
//
LOCUS       DAWITQ010000060        10421 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.060, whole genome shotgun sequence.
ACCESSION   DAWITQ010000060 DAWITQ010000000
VERSION     DAWITQ010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10421)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10421)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10421
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.060"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            123..305
                     /locus_tag="WIX18_001154"
     CDS             123..305
                     /locus_tag="WIX18_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238267.1"
                     /translation="MFWYVIGFCSFVVALLSLWVNVGAFGMQEDDTPQSDYEKRLGLG
                     AKLKNKNTPDTEEKQQ"
     gene            complement(367..1368)
                     /locus_tag="WIX18_001155"
     CDS             complement(367..1368)
                     /locus_tag="WIX18_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HEZ5238268.1"
                     /translation="MIDGQTTEPKQKTRIILAPMQGLVDDVMRDLLTRIGGYDECVSE
                     FVRITHTVHSRSIWLKYVPEIANGNKTFSGTPCTVQLLGSDADNMAANALEAVRFGAN
                     KIDLNFGCPAPTVNKHKGGAILLKEPELIFHIVKTLRGRLPAHIPLTAKMRLGYEDKS
                     RALECACAIAEGGACGLTVHARTKAEGYEPPAHWEWIRKIRDSVNIPVTANGDVFSLQ
                     DYIGIKTISGCNSVMLGRGAVIRPDLARQIKQYENGGPVKDTDFAEVSKWIRQFFELC
                     LTKEANNKYPIARLKQWLGMMKKTFDPAQTLFDRVRTVKDADEVRRILNAFEHEINV"
     gene            complement(1444..5277)
                     /locus_tag="WIX18_001156"
     CDS             complement(1444..5277)
                     /locus_tag="WIX18_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/FMN-binding oxidoreductase"
                     /protein_id="HEZ5238269.1"
                     /translation="MTTTTAPQRIREIPYNYTSYTDREIVIRLLGDEAWQILQDLRGQ
                     RKTGRSARMLFEVLGDIWVVVRNPYLVDDLLEHPKRRAALVREMRHRLNEIRKRRDDN
                     RQVDVLVAAAEKAVERFDSSFDETSQKRHQILERLSKITKPHNIMFDGLARVTHVTDA
                     TDWRVEYPFVVVNPDTEAEVAPLVRALIELDLVIIPRGGGTGYTGGAIPLDAMSAVIN
                     TEKLDKHRGVEFVELAGLDGRHPIIRCGAGVVTRRVEETAHQAGLVFAVDPTSADASC
                     VGGNVAMNAGGKKAVLWGTALDNLAYWQMVNPQGEWLRIERVRHNFGKIHDEETAIFD
                     VHTLDSDGLNVVKTERLEIPGHKFRKVGLGKDVTDKFLSGLPGVQKEGTDGIITSVAF
                     VLHKMPKYTRTVCMEFFGTVATATPSIVEIRDFLLAHESVRLAGLEHLDWRYVRAVGY
                     ATKAAGKGRPKMVLLADVVSDDEAAVEAAAEHICELARARDGEGFIAISPEARKTFWL
                     DRSRTAAIAKHTNAFKINEDVVIPLERLGEYSDGIERINIELSIQNKLKLCAALEQYL
                     SGKLPIDKMGTDLPTAELLGERGKHALAHVSAVKARWDWLLANLDTPLADYKARYGAA
                     VHAAPEAKDNESCFTAFRDFRLRVSVKADVMKPLSEIFSGKTDTKIIEGLGKIHAKTV
                     RGRVFVALHMHAGDGNVHTNIPVNSDDAEMLQTAYRSVERIMKIARSLNGVISGEHGI
                     GITKLEFLSDEEMQPFWDYKNQVDPKHTFNRHKLMKGSDLRNAYTPSFELLGAESLIM
                     EKSDLGTIADSVKDCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQT
                     RRGVSVKHFEELADIGDHCTVCHRCVKPCPVNIDFGDVTVAVRNYLADSGHKRFAPAA
                     SMGMAFLNATGPKTIKTLRAAMIQTGFPAQNFAYKIGKLLPVGTKKQKAEPKATVGKA
                     PIKEQIIHFINRPLPKNVPAKTPRSLLGIEDDKSIPIIRNPASPEDAEAVFYFPGCGS
                     ERLFSQIGLAVQAMLWHVGVQTVLPPGYMCCGYPQDAGGNKAKAEEMSTNNRVAFHRM
                     ANTLNYLDIKTVVVSCGTCYDQLEKYRFEEIFPGCRIIDIHEYLLEKGVKLDGVQGQQ
                     YLYHDPCHTPIKTMNATQMASSLMGQKVVLSDRCCGESGMFAVKRPDIATQVKFRKQE
                     EIEKNLKELPQGEPVKMLTSCPACLQGLSRYTDDNNMPADYIVIEMAKHILGENWLDE
                     FVKKANNGGVEKVLL"
     gene            5538..5634
                     /gene="ffs"
                     /locus_tag="WIX18_001157"
     ncRNA           5538..5634
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="WIX18_001157"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            5801..7492
                     /gene="dld"
                     /locus_tag="WIX18_001158"
     CDS             5801..7492
                     /gene="dld"
                     /locus_tag="WIX18_001158"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HEZ5238270.1"
                     /translation="MSASQLLSRLTQTVGEKYIITDPAKTEQYRQGYRFGEGKALAVV
                     RPGSILEMWKILQACVEADVIVITQAANTGLTGGSTPDGNDYDRDIVIVNTMRMNIIQ
                     TINNNEQVVCLPGSTLNQLELLLKPLGREPHSVIGSSCIGASVLGGVCNNSGGALVQR
                     GPAYTEMALFAQINEEGRLELVNHLGIDLGDTPEEILTNLQGHHYQNKDIKQDAGKGH
                     DHAYCEHVRQVDEPTAARFNADPARHYEASGCAGKLMVFAVRLDTFPQEKQTAVFYIG
                     TNDINELTDIRRAALGEFESLPVSGEYIHRHAFDIADVYGKDTFYVIKKFGTHQLPKL
                     FDLKARVDRFGKKASFLPKHFSDKAMQFVSKYLPDHLPKSMRDYRDKYEHHLILKMGG
                     KGVDEARAFLKEYFAHHSGAFFECNAEETQAAMLHRFAVASAAIRYRAVHDDEVEDLV
                     ALDIALRRDDRDWFEKLPSEIDNKIIHKLYYGHFMCHVFHQDYIIKKGNDCMALEHEM
                     LHLLDQRGAQYPAEHNVGHLYEAKPALKQFYRKLDPTNSFNPGVGKTSKKKNWAE"
     gene            7624..7731
                     /locus_tag="WIX18_001159"
                     /pseudo
     CDS             7624..7731
                     /locus_tag="WIX18_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            7787..8158
                     /locus_tag="WIX18_001160"
     CDS             7787..8158
                     /locus_tag="WIX18_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2628 domain-containing protein"
                     /protein_id="HEZ5238271.1"
                     /translation="MKPYKIYTHPALPPQAVKQGWSWPGLLFGTLWACFKRMWGLGLG
                     LTGAIFVLAVFAQLVYGDTPATDSAFNVLGLAVSVWFGAKGNSLYARHLLSRGYTELP
                     ETVEAANPQAALAQYFGRGGR"
     gene            8313..8861
                     /locus_tag="WIX18_001161"
     CDS             8313..8861
                     /locus_tag="WIX18_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEZ5238272.1"
                     /translation="MARLTVHTLETAPEAAKARVEAVLQNNGFIPNLIGVLANAPEAL
                     AFYQEVGKLNAANSLTAGEVEVIQIIAARTNQCGFCVAGHTKLATLKKLLSEQSVKAA
                     RALAAGEFDDAKLGALAAFTQAVMAKKGAVSDDELKAFFDAGYNQQQAVEVVMGVALA
                     TLCNYVNNLGQTEINPELQAYA"
     gene            8995..10086
                     /locus_tag="WIX18_001162"
     CDS             8995..10086
                     /locus_tag="WIX18_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HEZ5238273.1"
                     /translation="MNAQTLIANVAELVKTKLKPIVDDIDRKGYYPEAFMRELGAIGG
                     FGAVGTEAEGGNGLGLATQIAVLREIGKECGATSFSAWCQAACAWYLHQTPNQAVKDK
                     YLADILQGKVLAGTGMSNTVKHLAGIEKHNLQAERVEGGYTVNGALPWVSNIGEEHIW
                     ANTAQIGGGYVMFITGGQWEGVSLQNCPEFCALEGTRTFSLNFKDVFIPDEDIIAAPE
                     QFADYIQSIKAGFILLQIGIGAGVIDGSLGIIRLANVVNAEVNRYLDDGYDSLKTRLD
                     GAWAETERLAGLAWSGTPDNLTTLKLREAAAVLTLAAAQSAALHSGAKGYLMRSPAQR
                     RVREAMFVAIVTPAIKHLRKEIAAIEAAK"
BASE COUNT         2419 a         2862 c         2810 g         2330 t
ORIGIN      
        1 atttgtactg tcttcggctc gccgccttgt ccttatttaa atttaattca ctatatttgc
       61 ccgtgcgttt gtgataaatt cggcactgta tttgatatga ttttaacaaa tcgggagggg
      121 caatgttttg gtatgtaatc ggcttttgct cctttgtcgt cgcgctgctg tcgctgtggg
      181 tcaatgtcgg cgcattcggt atgcaggaag acgatacccc gcaatcggat tatgaaaaac
      241 gtttgggctt gggtgcgaag ctgaaaaaca aaaatacgcc ggatacggaa gaaaagcagc
      301 aataaagata tgaaatgccg tctgaaagat tttcagacgg catttgcttt gaagcatggg
      361 agacagtcaa acatttatct catgctcaaa tgcgttcagg attcggcgga cttcatccgc
      421 atccttaacc gttcggacgc ggtcaaacag cgtttgcgcc gggtcgaacg tttttttcat
      481 catgcccaac cattgcttaa gacgggcgat cgggtattta ttgtttgcct cttttgtcag
      541 gcacagctcg aaaaactgcc gtatccattt ggaaacttcg gcaaaatccg tgtctttgac
      601 cggcccgccg ttctcgtatt gcttgatttg ccgcgccaaa tcggggcgga tgaccgcgcc
      661 gcgaccgagc atcacgctgt tgcagccgct gattgttttg atgccgatat agtcttgcag
      721 gctgaaaacg tcgccgttgg cggtaacggg aatattgacg ctgtctcgga ttttccttat
      781 ccattcccaa tgcgccggcg gttcgtaacc ctcggctttg gtacgcgcgt gtacggtcag
      841 tccgcatgcg cccccttcgg caatcgcaca ggcgcattcc aaagcccggc ttttgtcttc
      901 gtaaccgagc cgcatttttg cggtgagcgg aatatgtgcg ggcaaacgtc cgcgcagcgt
      961 tttgacgatg tggaatatca gttccggctc ttttaaaagg attgcgccgc ctttgtgttt
     1021 gttgacggtg ggcgcggggc agccgaagtt caaatcgatt ttgttcgcac cgaagcggac
     1081 ggcttccagc gcattcgccg ccatattgtc cgcatcgctg cccaaaagtt ggacggtgca
     1141 gggcgtgccg gaaaacgttt tgtttccgtt ggcgatttcg gggacatatt ttaaccatat
     1201 ggatcgggaa tgcacggtat gggtaatgcg tacaaattcg ctgacgcatt cgtcgtagcc
     1261 gccaatacgc gtcagcaggt cgcgcatcac gtcatcgacc agaccctgca taggggcaag
     1321 gatgattcgg gttttttgtt tgggttcggt tgtttgtccg tcaatcatga tttgggtagg
     1381 tattgggttt aaacaatgcc gtctgaagac ttcggcgttc agacggcatt tccgtgtccg
     1441 ttgttacagc aatacttttt ccacgccgcc gttgttggct tttttcacaa actcgtctag
     1501 ccagttttcg ccgaggatgt gtttcgccat ttcgatgacg atgtagtcgg caggcatatt
     1561 gttgtcgtcg gtgtagcggc tcaagccttg caggcaggct gggcaggaag taagcatttt
     1621 gacgggttca ccctgcggca gctctttgag gtttttctcg atttcctctt gtttgcggaa
     1681 tttgacttgg gtggcgatat cgggtcgttt gacggcgaac ataccggact cgccgcagca
     1741 gcggtcgctt aagacgactt tctgccccat caggctgctg gccatttggg tggcgttcat
     1801 ggttttgatg ggggtgtggc aggggtcgtg gtagaggtat tgctgacctt gcacgccgtc
     1861 gagtttcacg cctttttcga gcaggtattc gtggatgtcg atgatgcggc agccggggaa
     1921 gatttcttca aagcggtatt tttcgagctg gtcgtaacaa gtgccgcaac tgacaacgac
     1981 ggtcttaatg tcgaggtagt tgagggtgtt tgccatacgg tggaaagcca cgcggttgtt
     2041 ggtgctcatt tcttcggctt tagccttgtt gccgcccgcg tcttgcggat agccgcaaca
     2101 catatagccg ggcggcagga cggtttgcac gccgacgtgc cagagcatgg cttggacggc
     2161 gagtccgatt tggctgaaca ggcgttccga accacagccg ggaaagtaaa acacggcttc
     2221 ggcatcttcc ggagaagccg gattgcggat gatggggatg cttttgtcgt cttcgatgcc
     2281 caataaggag cgcggtgttt tggcaggcac gtttttgggc agcggacggt tgatgaagtg
     2341 gataatttgt tctttaatcg gggctttgcc gacggttgcc ttgggttcgg ctttttgctt
     2401 tttcgtgccg acgggcagca gtttgccgat tttgtaggcg aaattctgcg cggggaagcc
     2461 ggtttgtatc atcgcggcac gtagggtttt aatggttttc gggccggtcg cgtttaggaa
     2521 tgccataccc attgaagctg ccggcgcaaa gcgtttgtgg ccggaatcgg caaggtagtt
     2581 gcggacggct acggttacgt cgccgaagtc gatattgacg gggcagggtt tgacgcagcg
     2641 gtggcacacg gtgcagtggt cgccgatgtc tgccagttct tcaaaatgtt tgacggaaac
     2701 gccgcgacgg gtttgttctt cgtataaaaa ggcttcggtc aagagcccca cgccgaggat
     2761 tttgttgcgc gggctgtaca gcaggttggc acgcggaacg tgggtggagc agacgggttt
     2821 gcatttgccg cagcgcaggc agtctttgac ggaatcggca atcgtgccga ggtctgattt
     2881 ttccataatc agcgattccg cgcccaaaag ctcgaaagac ggcgtatagg cgttgcgcag
     2941 gtccgagcct ttcatcagtt tgtggcggtt gaaggtgtgt ttgggatcga cttggttttt
     3001 gtagtcccaa aacggctgca tttcttcgtc gcttaaaaat tcgagcttgg taatgccgat
     3061 gccgtgttcg ccggaaatca cgccgttaag cgaacgggcg attttcataa tgcgttccac
     3121 agaacggtat gccgtctgaa gcatttcggc atcgtctgaa ttgacgggga tattggtgtg
     3181 gacattgccg tcgccggcgt gcatatgcag ggcgacaaag actctgccgc gcacggtttt
     3241 ggcgtggatt ttgcccaagc cttcgatgat tttggtgtcg gttttgccgc tgaagatttc
     3301 agaaagcggc ttcattacgt ctgctttgac agacacgcgc aggcggaaat cgcggaatgc
     3361 ggtaaagcag ctttcattgt ctttggcttc gggcgcggcg tggacggctg cgccgtagcg
     3421 ggccttgtag tcggcaagcg gcgtgtcgag attggcgagc aaccagtccc aacgcgcttt
     3481 gacggcggaa acgtgggcca gggcgtgttt gccgcgttcg cccaacagtt cggcggtcgg
     3541 caggtcggtt cccattttgt cgatggggag tttgccggac agatattgct ccaaggcggc
     3601 acagagtttg agtttgtttt gaatggaaag ctcaatgttg atgcgttcga tgccgtctga
     3661 atactcgccg agcctttcga gtgggatgac cacgtcttcg ttgattttaa aggcgttggt
     3721 gtgtttggcg atggcggcgg tgcggctgcg gtcgagccag aaggttttgc gggcttcggg
     3781 agatatggcg ataaagcctt cgccgtcgcg ggcgcgggca agttcgcaga tgtgttcggc
     3841 ggctgcctct acggcggctt cgtcgtctga aaccacgtcc gccagcaaaa ccattttcgg
     3901 ccgtcccttg cccgccgctt tggtggcgta gccgacggcg cggacataac gccagtccaa
     3961 atgttccaaa cctgccagcc gtacgctttc atgggcaagc aaaaagtcgc ggatttcgac
     4021 aatagatggc gtggcggtgg caaccgtgcc gaaaaactcc atacacacgg tgcgcgtgta
     4081 tttcggcatt ttatgcaaca cgaaggcaac gctggtgatg atgccgtccg tgccttcttt
     4141 ctgcacgccg ggcaggccgc tcaagaattt gtcggtaacg tctttgccca aaccgacttt
     4201 gcggaatttg tgaccgggaa tttccaagcg ttcggttttg acgacattga ggccgtctga
     4261 atccagtgtg tgaacgtcaa atattgcggt ttcttcgtcg tggattttgc cgaaattgtg
     4321 gcgcacgcgt tcgatacgca gccattcgcc ttgagggttg accatttgcc agtaggcgag
     4381 gttgtccaac gccgtccccc acagcacggc ttttttaccg cccgcgttca tcgctacatt
     4441 accgcccacg caggacgcgt cggcagaagt cggatcgacg gcgaacacca aacctgcctg
     4501 atgcgcggtt tcttccactc gccgcgtaac cacgcccgcg ccgcaccgga taatcggatg
     4561 tctgccatcc aagcccgcca gttcgacaaa ttccacgccg cgatgtttgt ccagcttttc
     4621 cgtattgatg accgcgctca ttgcgtccaa aggaatcgcg ccgccggtat aacccgtacc
     4681 gccgccgcgc gggataataa ccaagtccaa ctcaattaag gcgcgcacca aaggcgcgac
     4741 ttccgcctcc gtgtcgggat tgacgacgac aaacggatat tcgacgcgcc agtcggttgc
     4801 atcggtaaca tgcgttaccc gcgccagccc gtcgaacata atattgtgcg gcttggtaat
     4861 tttgcttaag cgttccaaaa tttgatggcg tttttggctg gtttcatcaa aactgctatc
     4921 aaaacgctcg actgcctttt ccgctgccgc aaccaataca tccacttgcc gattatcgtc
     4981 gcggcgtttg cggatttcgt tcaaacggtg gcgcatttcc cgcaccagcg cggcgcggcg
     5041 tttcgggtgc tccaacaagt catcgaccag atatggattg cgcacaacta cccaaatatc
     5101 gcccaacact tcaaacagca tccgtgccga acgtccggtt ttacgctgtc cgcgcaagtc
     5161 ttgcagaatc tgccacgctt cgtcgcccag caggcggatg acgatttcgc ggtcggtata
     5221 agaagtatag ttatagggaa tttctcgaat acgctgaggg gcagtagtcg tggtcatggt
     5281 gtgtccgtgc ttggcagttt ttatttgaat gccgtctgaa aattcggttt caggcgagtt
     5341 tgaaaaggcg ataatgtagt tcaatttttg atatttttca atgccgaaac aggaaatacc
     5401 cttatagaaa caaaataacg ctttgagaaa ttgttgacaa tattatcaaa tataaatttt
     5461 aggtggtgtt tccggcgtat gaccgtatca aaacggttga gtttttcaga aaacccgtta
     5521 taatgccgtt tctctgaggc gggtctcccc gcatggcaaa tcggaacacc gggtcagggg
     5581 cggaagccag cagcccactc cggtgcgcca gtgccggggg tttggcccgc cgccctattt
     5641 gaaacgccgg agctttgatg ttccggcgtt cccgtatcgc accgttgccg tctgaaagcc
     5701 gttcagacgg cattttcttt actttgccat aacgtataac tacaatgtga aaacaattcc
     5761 aatgtgcaat gcacctgccg acaattttaa ggaaactgcc atgagcgcat cacaattact
     5821 gtcaagactg acccaaaccg taggcgaaaa atacatcatt accgaccccg cgaaaaccga
     5881 acaataccgc caaggttacc gcttcggcga gggtaaggcg ttggcggtgg ttcgccccgg
     5941 aagcattctg gaaatgtgga aaattctgca ggcgtgcgtc gaagcagacg tgattgtgat
     6001 tacgcaggcg gcgaataccg gactgaccgg cggttcgacc cccgacggca acgattacga
     6061 ccgcgacatc gtgattgtga acaccatgcg gatgaacatc atccaaacca tcaacaacaa
     6121 cgaacaagtc gtctgcctgc ccggctcgac cctgaaccag cttgaattgc tgctgaaacc
     6181 cttgggacgc gaaccgcatt cggttatcgg ctcttcctgc atcggtgcgt ccgtcttggg
     6241 cggcgtgtgc aacaactccg gcggcgcatt ggtacagcgc ggcccggcct acaccgaaat
     6301 ggcactgttc gcccaaatca acgaagaagg caggttggaa ctggtcaacc acttgggcat
     6361 agacttgggc gacacgcccg aagaaatcct gaccaacctg caaggtcatc attatcaaaa
     6421 caaagacatc aaacaagacg cgggcaaagg acacgaccac gcctattgcg aacacgtccg
     6481 ccaagtggac gaaccgaccg ccgcgcgttt caatgccgac cccgcccgcc attacgaagc
     6541 ctcgggctgc gcgggcaaac tgatggtttt tgccgtccgt ttggacacct tcccgcaaga
     6601 aaaacaaacc gccgtgttct acatcggcac gaacgacatc aacgagctga ccgacatccg
     6661 ccgcgccgcc ttgggcgaat ttgaaagcct gcctgtttcc ggcgaataca tccaccgcca
     6721 cgctttcgac attgccgacg tgtacggcaa agacacgttt tacgtcatca aaaaattcgg
     6781 tacgcaccaa ctgccgaaat tatttgactt gaaggcgcgc gtggacaggt tcggcaaaaa
     6841 agccagcttc ctgcccaaac atttttccga caaggccatg cagttcgtca gcaaatacct
     6901 gcccgaccac ctgcccaaat ccatgcgcga ttaccgcgac aaatacgaac accacctgat
     6961 tctgaaaatg ggcgggaaag gcgtggatga ggcgcgcgcg ttcttaaaag aatattttgc
     7021 acaccacagc ggcgcgtttt tcgagtgcaa cgccgaagaa acccaagccg cgatgctgca
     7081 ccgtttcgcc gtcgcctccg ccgccatccg ctaccgcgcc gtgcatgatg acgaagtgga
     7141 agacttggtc gcgctcgaca tcgccctgcg tcgcgacgac cgcgattggt ttgaaaaact
     7201 gccgtcggaa atcgacaata aaatcatcca taaactctac tatggacatt tcatgtgcca
     7261 cgttttccat caggattaca tcatcaaaaa aggcaacgac tgcatggcgt tggaacacga
     7321 aatgctgcat cttttagacc aacgcggcgc gcaatatccc gccgaacaca acgtcggtca
     7381 tttgtatgaa gccaaacccg cgctcaaaca gttttaccgc aaacttgacc cgaccaacag
     7441 cttcaacccg ggcgtaggca aaaccagcaa aaagaaaaac tgggcggaat aagcgcgtcc
     7501 gctttgaagg caggcaatgc cgtctgaagg caaaacgccg ttcagacggc attgtcgggt
     7561 ttgaagttcc ccgtcgggta atcgctttca aaccgtatgc cgacacacgg gcgcgcccct
     7621 cccaaatata gtggattaaa tttaaatcag gacaaggcaa cgaagccgca gacagtacag
     7681 atagtacggc aaggcgaggt aacgccgtac tggtttaaat ttaatccact ataaagtctg
     7741 atcctacctt cccaaagggc agggtttcaa ccgaaaagga aacacgatga aaccatacaa
     7801 aatctacacc catcccgccc tgccgcccca agccgtcaaa caaggctggt catggccggg
     7861 gctcttgttc ggcacgctgt gggcgtgttt caaaagaatg tggggtttgg ggctggggct
     7921 gacgggcgcg atattcgtgc tggctgtgtt tgcccaactg gtttacggcg acacgcccgc
     7981 cacagactcg gcgtttaacg tattgggctt ggcggtttcc gtctggttcg gcgcaaaggg
     8041 caacagcctt tatgcacgcc accttttatc gcgcggctat accgaattgc ccgaaacggt
     8101 tgaggcagcc aacccccaag ccgcattggc gcaatatttc gggcgcgggg gccgataagc
     8161 gcgttttctt ttccatcatg ccgtctgaaa aatgttcaga cggcatttct tataaccttt
     8221 cgtttgcagc acataaccaa tcagtctttc ctattccgtt ccgaaatgcg taccatgcgc
     8281 ccgtacccaa tatttgcgaa caaggaaaga aaatggcacg tttaaccgta cacaccctcg
     8341 aaaccgcccc cgaagccgcc aaagcgcgcg tcgaggcggt acttcaaaac aacggcttta
     8401 tccccaacct tatcggcgta ttggcaaacg cccccgaagc cttggcgttt taccaagaag
     8461 tcggcaagct caacgccgcc aacagcctga ccgccggcga agtcgaagtc atccagatca
     8521 tcgccgcccg taccaaccaa tgcggttttt gcgtggcagg gcacaccaaa ctcgcaaccc
     8581 tgaaaaaact cctgtccgaa caatccgtca aagccgcgcg cgctttggca gcaggcgaat
     8641 ttgacgatgc caaactcggc gcgctcgccg ccttcaccca agccgtaatg gcgaaaaaag
     8701 gcgcggtatc cgatgacgaa ctcaaagcat ttttcgatgc gggctacaac cagcagcagg
     8761 cagtcgaagt cgtgatgggc gtagccttgg caaccctgtg caactacgtc aacaacctcg
     8821 gacaaaccga aatcaacccc gaattgcagg cttacgcctg atacggcaaa ccgcccgaat
     8881 atcgggcggt ttttcaaaaa cacccctcaa acaaaaacaa gccgcccaag cggcagggaa
     8941 gcagccgcgc atcaggcgcg cccccgattc ccccgcaaac cttaaggaac aaagatgaac
     9001 gcccaaaccc tgattgccaa cgttgccgaa ctcgtcaaaa ccaagctcaa acccatagtg
     9061 gacgacatcg accgcaaagg atactacccc gaagcattta tgcgcgaact cggcgcaatc
     9121 ggcggattcg gcgcagtcgg cacagaagcc gaaggcggca acggcttggg tttggcaacg
     9181 caaatcgccg tattgcgcga aatcggcaaa gaatgcggcg caacctcctt cagcgcgtgg
     9241 tgtcaggcgg cttgcgcgtg gtatctgcat caaacgccca accaagccgt caaagacaaa
     9301 tacctcgccg acatcctgca aggcaaagta ttggcaggca ccggaatgtc caataccgtc
     9361 aaacaccttg ccggcattga aaaacacaac cttcaagccg agcgcgtgga gggcggttat
     9421 acagtcaacg gcgcgctgcc gtgggtatcc aacatcggcg aagagcatat ttgggcaaat
     9481 accgcccaaa tcggcggcgg ctacgtcatg tttatcaccg gcggacaatg ggaaggcgta
     9541 agcctgcaaa actgccccga attttgcgcc ctcgaaggca cgcgcacctt cagcctgaac
     9601 ttcaaagacg tatttatccc cgacgaagac atcatcgccg cgcccgaaca gtttgccgac
     9661 tacatccaaa gcatcaaagc aggctttatc ctcctgcaaa tcggcatcgg cgcgggcgtg
     9721 atagacggca gcctcggcat catccgcctc gccaacgtcg tcaacgccga agtcaaccgc
     9781 tatctcgacg acggctacga cagcctcaaa acaaggctgg acggcgcgtg ggcagaaacc
     9841 gaacggctcg ccggattggc ttggagcggc acgcccgaca accttaccac cctcaagctg
     9901 cgcgaagccg ccgccgtact gacacttgcc gccgcccaat ccgccgccct gcattccggc
     9961 gcaaaaggct acctgatgcg gagtcccgcc caaaggcgcg tccgcgaagc aatgtttgtc
    10021 gccatcgtaa ctcccgcgat caaacacctc cgcaaagaaa tagcggcaat cgaagccgca
    10081 aaataaacag gcggaaaaaa ccgaaacccc catcgcgtca ttcccgcgaa agcgggaatc
    10141 cagcccccaa cgtaacagga atccatcgga aaaaacagaa accctcaaac cgtcattccc
    10201 gcaaaagcgg gaatccagcc ccccctaacg caacaggaat tcatcgaaaa aaccgaaacc
    10261 tccaaaccgt cattcccacg gaagtgggaa tccagtaacc gaaaaaccac aggaatctat
    10321 cgaaaaaaaa cccaaccccc aaaaaaaccg ggcggatacc tcaccatcct cccaaaccct
    10381 gatttatagc ggatgaacaa aaatcagggc aagacggcga a
//
LOCUS       DAWITQ010000061        10366 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.061, whole genome shotgun sequence.
ACCESSION   DAWITQ010000061 DAWITQ010000000
VERSION     DAWITQ010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10366)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10366)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10366
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.061"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(11..1102)
                     /gene="mltB"
                     /locus_tag="WIX18_001163"
     CDS             complement(11..1102)
                     /gene="mltB"
                     /locus_tag="WIX18_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HEZ5238274.1"
                     /translation="MKKRKILPLAICLAALSACTAMEARPPRVNEAQAPRADEMKKES
                     RPAFDTAAVPVSDSGFAANANVRRFVDDEVGKGDFSRAEWQDFFDKAAYKADIVKIMH
                     RPSTSRPWYVFRTGNSGKAKFRGARRFYAENRAVVDDVAQKYGVPAELIVAIIGIETN
                     YGKNTGSFRVADALATLGFDYPRRAGFFQKELVELLKLAKEEGGDVFAFKGSYAGAMG
                     MPQFMPSSYRKWAVDYDGDGHRDIWGNVGDVAASVANYMKQHGWRTGGKMLVSATLAP
                     GADVQAIIGEKTALTRTVADLKAYGIIPGEELADDEKAVLFKLETAPGVFEYYLGLNN
                     FYTVWQYNHSRMYVTAVRDIANSLGGPGL"
     gene            complement(1251..2678)
                     /locus_tag="WIX18_001164"
     CDS             complement(1251..2678)
                     /locus_tag="WIX18_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HEZ5238275.1"
                     /translation="MIHTEPSAQPSTMDTAAFLKHIESAFRRIFSDGIDLMRYLPEDK
                     WLALKQAGLLLPFLDKKHGGRKGSQFEIQEVLRIAGHYGVPVTLRTGIEGALVLQPLQ
                     EFGDEAQIAQGLDMVFKGEGGGLGVTEPETSGAAIAREMQSYYEYTDGQTIYVNAAKY
                     WQGNSQSDFLLVAAKERKNGKLAKVIDLLLVPKTYIRCETLASEGLRAVRYAVNRIDA
                     EMPATAVMKLSQSDAAGLRAFQNIFIRSRLQLIGMTHGIMEYILENLERYVRNDIRFV
                     DYERREIRRRHQVSEILYRYVCHSVSPVAPVAHQLMEANIVKTLATEYTYAAAQMLQK
                     LLGAKGFERGHTAGNIAIDIRPFTIFEGPNDMLYAEIYDQFVRATAEEKEAGMKLDKN
                     QTLLDRLQTDARFAAVARDYTLPEDIRSFLQEHTLTDACALQKVFIGKIIARLFVFVQ
                     AEHEDTAAFLLNDIRKDILDCRYCG"
     gene            2863..6546
                     /gene="mfd"
                     /locus_tag="WIX18_001165"
     CDS             2863..6546
                     /gene="mfd"
                     /locus_tag="WIX18_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEZ5238276.1"
                     /translation="MTYPIPKPREKSRWLNLSQGSLPLALARYLPHRRLKVVLTQDAE
                     QALRLQTAWRFFRPHDTAVFLPDWETLPYERFSPHQDLVSERLSALWQIKSGAADVLF
                     VPVATAMQKLPPVPFLAGRTFWLKTGQTLDIGRLKSDLVDAGYNHVSHVVAAGEFAVR
                     GGIVDLFPMGSEMPYRIDLFDDEIDSIKTFDTETQRTISPVSEIRLLPAHEFPTDNEA
                     QKIFRSRFREEVDGNPNDAAVYKAVSNGHFGAGVEYYLPLFFENELETLFDYIGEDAL
                     FVSLGDVHAEANRFWSDVKSRYAMAQGDETYPPLLPQYLYLSADVFAGRLKNYGQVLP
                     DVSGKEYTLPDLAVNRQADEPLQALKDFQTAFDGRILLCAESLGRRETMLGFLQQNGL
                     KAKPVSDWQGFLSAHEPLMITVAPLAYGFKLGGLQSPSQQQAAPASEGEGDAITDQTE
                     FSASATNPLPSPLPQEREQSTAAISDSLKTKSSLYPIENSLHGQIQQQPAPSPVGEGW
                     GEGKAVAAQSAIAVITESDLYQYVARSRIHNRRKKHAAVSDDLLRDLAEINIGDPVVH
                     EEHGIGRYMGLITMNLGGETNEMMLLEYAGEAQLYVPVSQLHLISRYSGQAHENIALH
                     KLGSGAWNKAKRKAAEKARDTAAELLNLYARRAAQSGHKFEINELDYQAFADGFGYEE
                     TEDQAAAIAAVIKDLTQAKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAVLAPTT
                     LLVEQHAQNFADRFADFPVKVASLSRFNNSKATKAALEGMADGTVDIVIGTHKLVQDD
                     IKFKNLGLVIIDEEHRFGVRQKEQLKRLRANVDILTMTATPIPRTLSMALEGLRDFSL
                     ITTAPSRRLAVKTFVKPFSEGSVREAVLRELKRGGQVFFLHNEVDTIENMRERLETLL
                     PEARIGVAHGQLRERELEQVMRDFLQQRFNVLLCSTIIETGIDIPNANTIIINRADKF
                     GLAQLHQLRGRVGRSHHQAYAYLLTPEYITKDAEKRLDAIAAADELGAGFTLAMQDLE
                     IRGAGEILGEGQSGEMMQVGFTLYTEMLKQAVRDLKKGRQPDLDAPLGITTEIKLHSP
                     ALLPESYCPDIHERLVLYKRLAVCETVQQINAIHEELVDRFGLPEQPVKTLIESHHLR
                     LMAKELGINAIDAAGEAVTVTFGKNNNIDPTEIILLIQNDKKYRLAGADKLRFTAEME
                     NIEVRINTVKNVLKTLQNRCLPK"
     gene            6695..7078
                     /locus_tag="WIX18_001166"
     CDS             6695..7078
                     /locus_tag="WIX18_001166"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HEZ5238277.1"
                     /translation="MFRTMLGGKIHRATVTEADLNYVGSITVDQDLLDAAGIYPNEKV
                     AIVNNNNGERFETYTIAGKRGSGVICLNGAAARLVQKGDIVIIMSYVQLSEPEIAAHE
                     PKVVLVDGNNKIRDIISYEPPHTVL"
     gene            7100..7942
                     /gene="kdsA"
                     /locus_tag="WIX18_001167"
     CDS             7100..7942
                     /gene="kdsA"
                     /locus_tag="WIX18_001167"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEZ5238278.1"
                     /translation="MDIKINDFTLGNNSPFVLFGGINVLESLDSTLQTCAHYVEVTRK
                     LGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAEFGIPVITDVHEPHQCQPV
                     AEVCDVIQLPAFLARQTDLVAAMAETGNVINIKKPQFLSPSQMKNIVEKFHEAGNGKL
                     ILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQA
                     LDLALAGMATRLAGLFLESHPDPKLAKCDGPSALPLHLLEDFLIRIKALDDLIKSQPI
                     LTIE"
     gene            7957..8397
                     /locus_tag="WIX18_001168"
     CDS             7957..8397
                     /locus_tag="WIX18_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HEZ5238279.1"
                     /translation="MMQTFRKISLYAATLWLGMQIMAGYIVAPVLFKMLPKMQAGEIA
                     GVLFDILSWSGLAVWGAVLAAAFAALTRRQTALLLFLLSALAANRFLITPVIEALKYG
                     HENWLLSALGGSFGMWHGISSIVFMAAALLSIYLSWRLYGKNAV"
     gene            8442..9728
                     /gene="eno"
                     /locus_tag="WIX18_001169"
     CDS             8442..9728
                     /gene="eno"
                     /locus_tag="WIX18_001169"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEZ5238280.1"
                     /translation="MSAIVDIFAREILDSRGNPTVECDVLLESGVMGRAAVPSGASTG
                     QKEALELRDGDKSRYLGKGVLKAVDHVNNQIAQALIGIDASEQSYIDQIMIELDGTEN
                     KGNLGANATLAVSMAVARAAAEDAGLPLYRYLGGAGPMSLPVPMMNVINGGEHANNSL
                     NIQEFMIMPVGAKSFREALRCGAEIFHALKKLCDSKGFPTTVGDEGGFAPNLNSHKEA
                     LQLMVEATEAAGYKAGEDVLFALDCASSEFYKDGKYHLEAEGRSYTNAEFAEYLEGLV
                     NEFPIISIEDGMDENDWEGWKLLTEKLGGKVQLVGDDLFVTNPKILAEGIEKGVANAL
                     LVKVNQIGTLSETLKAVDLAKRNRYASVMSHRSGETEDSTIADLAVATNCMQIKTGSL
                     SRSDRMAKYNQLLRIEEELAEAADYPSKAAFYQLGK"
     gene            9742..10020
                     /gene="ftsB"
                     /locus_tag="WIX18_001170"
     CDS             9742..10020
                     /gene="ftsB"
                     /locus_tag="WIX18_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HEZ5238281.1"
                     /translation="MKWVTVVLSFALVCCQYSLWFGKGSIGRNSSLREQIAVQEEKNQ
                     TLALRNHSLAAEVYDLENGQEAISEIARVELGYIQDGETFYRLIRHNR"
     gene            complement(10061..10351)
                     /locus_tag="WIX18_001171"
     CDS             complement(10061..10351)
                     /locus_tag="WIX18_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S ferredoxin-like protein"
                     /protein_id="HEZ5238282.1"
                     /translation="MARIGTNKGFFELLEGETLLEGLERTGHMVEYQCRSGYCGSCRV
                     KILEGSVTYREPPLAFLGRDEILPCCCCVEGDVRLDCGLSGEDEGLSDSLLK"
BASE COUNT         2476 a         3020 c         2657 g         2213 t
ORIGIN      
        1 ttaaaaaaca ttacaatccc gggccgccaa gcgaattggc aatgtccctg accgccgtta
       61 catacatccg gctgtggttg tactgccata ccgtataaaa attgttcaag cccaaataat
      121 attcaaacac gcccggtgcg gtttccagtt tgaacaaaac cgccttttca tcatcggcaa
      181 gctcttcgcc ggggatgatg ccgtacgcct tcaaatccgc caccgtccgc gtcagggcgg
      241 ttttttcgcc aatgattgcc tgaacatccg cacccggcgc caatgttgca gacaccagca
      301 ttttaccgcc cgtgcgccaa ccgtgctgct tcatataatt ggcaaccgat gccgcgacat
      361 cgccgacgtt gccccatatg tcccgatgtc cgtccccgtc ataatccacc gcccatttcc
      421 ggtagctcga aggcataaat tgcggcatac ccattgcacc cgcatagctg cccttaaagg
      481 cgaaaacatc gccgccctct tcttttgcca gctttaaaag ctcgaccaat tctttttgga
      541 aaaacccggc gcggcggggg taatcgaaac ctaaagtcgc caatgcgtcc gccacgcgga
      601 aactgcccgt atttttgccg taattcgttt caatcccgat aatcgccacg ataagctcgg
      661 cgggcacgcc gtatttttgc gccacatcat cgacaactgc gcggttttcc gcataaaacc
      721 ggcgcgcgcc gcgaaatttc gccttgcccg aatttcccgt gcggaacaca taccacggac
      781 gcgatgtgga gggtcggtgc ataatcttga cgatgtccgc cttgtaagcc gctttgtcaa
      841 aaaaatcctg ccattccgcc cgggaaaaat cccctttccc gacttcatcg tccacaaaac
      901 ggcggacatt tgcattggcg gcaaacccgc tgtcggatac cggtacggct gccgtgtcaa
      961 acgcggggcg gctttctttt ttcatttcat ccgcgcgggg ggcttgggct tcatttaccc
     1021 ggggcgggcg tgcctccatc gccgtacagg cagacaaagc cgccaaacaa attgccagcg
     1081 gcagtatttt tctctttttc ataaatatgt tccgaacaaa tagggtaagt gggaaagcgg
     1141 cgcaaggggc gcggtgcgaa atgcggcatc cgccgcaatc ggcggctttg tggaataccg
     1201 cgcgttgcct tttgcaccgc ctgaaatccg tatgccgccg tatttgcccg ctatccgcaa
     1261 tatcggcagt ccaatatatc tttgcggatg tcgttcagca ggaaggctgc ggtgtcttcg
     1321 tgttccgcct gtacgaagac aaagagtcgg gcgatgattt tgccgatgaa gactttttgc
     1381 agggcgcagg cgtcggtcag ggtgtgttcc tgcaggaagc tgcggatgtc ttcgggcaaa
     1441 gtgtagtcgc gggcgacggc ggcaaagcgg gcatcggttt gcaggcggtc gagcagggtt
     1501 tggtttttgt ccaacttcat gcctgcttct ttttcttcgg cggtggcgcg gacgaactgg
     1561 tcgtaaattt cggcataaag catatcgttc gggccttcaa aaatcgtgaa ggggcggatg
     1621 tcgatagcga tattgccggc ggtgtgtccg cgttcaaaac ccttcgcgcc caaaagtttt
     1681 tgcaacattt gcgcggcggc gtaagtgtat tccgtggcga gggttttgac gatgttcgcc
     1741 tccatcagct gatgggcgac gggggcaaca ggtgaaacgg aatggcagac gtagcggtaa
     1801 agaatctcgg aaacctgatg gcggcgccgg atttcgcggc gttcgtaatc gacgaatctg
     1861 atgtcgttgc ggacgtatcg ttccaggttt tcaaggatgt attccataat gccgtgcgtc
     1921 atgccgatca gttgcaggcg gctgcggata aagatgtttt ggaacgcgcg caaaccggca
     1981 gcgtcgctct gggagagttt catcacggcg gttgcaggca tttcggcatc gatgcggttg
     2041 acggcgtaac ggacggcgcg caagccttcg gatgcgaggg tttcgcagcg gatgtatgtt
     2101 ttggggacga gcagcaggtc gatgactttg gcgagtttgc cgtttttgcg ctctttggcg
     2161 gcaacgagga ggaagtcgct ttgcgagttg ccctgccagt atttcgcggc gttgacgtaa
     2221 atggtttgtc cgtcggtata ttcgtagtaa gactgcattt ctcgggcaat cgccgcgccg
     2281 gaggtttcgg gttcggtaac gcccaaacca ccgccctcgc ctttgaaaac catgtccaaa
     2341 ccctgtgcga tttgcgcttc atcgccgaac tcttgcagtg gctgcaacac cagcgcgcct
     2401 tcgatgccgg tacgcagcgt aacgggcacg ccgtaatgcc ccgcaatccg caagacttcc
     2461 tgaatttcaa actggctgcc cttgcgcccg ccgtgttttt tgtcgaggaa gggcaacagc
     2521 aaacccgcct gcttcaaggc aagccatttg tcttcgggca ggtatcgcat caggtcgata
     2581 ccgtctgaaa aaatgcggcg gaatgcggat tcgatgtgct ttaaaaaagc agccgtgtcc
     2641 atagttgacg gctgcgcact cggttcggtg tgtatcatcg gcttcctctg tcggttccca
     2701 ttaatcggcg gccggtcaaa ccgcctgcca cggtttagag ttaattttct aaactttacc
     2761 acaaagtgcg ccgggcaaca atccgccgac ctttcagacg gcatcgcgcc ccctcccgtg
     2821 ctaaaatgac cgtttgcatc actgtccgcc gattgccgca ctatgaccta ccccatcccc
     2881 aaaccccgtg aaaaatcccg ttggctcaat ctgtctcaag gctcgctacc cttggctttg
     2941 gcgcgttatc tgccgcatag gcggctcaaa gtcgtgctga cccaagatgc ggaacaggcg
     3001 ctacgccttc agacggcgtg gcggtttttc cgtccgcacg atacggcggt gttcctgccg
     3061 gactgggaaa cgctgcctta cgagcgtttt tcgccgcatc aggatttggt gtcggagcgt
     3121 ttgtcggcgt tgtggcagat taaaagcggc gcggcggacg tgttgttcgt gccggttgcc
     3181 acggcgatgc agaagctgcc gcccgtgccg tttctggcgg ggcgcacgtt ttggctgaaa
     3241 acgggacaga ctttggatat aggccgtctg aaaagcgatt tggtggatgc aggttataac
     3301 catgtttccc acgttgtcgc ggcaggcgag tttgccgtgc gcggcggcat tgtggatttg
     3361 ttcccgatgg gcagcgaaat gccgtaccgc atcgatttgt tcgacgatga aatcgacagc
     3421 atcaaaacct ttgacaccga gacgcagcgc accatctccc ccgtttccga aatccgtctg
     3481 ctgccggcgc acgagttccc caccgacaac gaggcgcaaa aaatcttccg cagccgtttt
     3541 cgcgaggaag tcgatggcaa tccgaacgat gccgctgtgt acaaagccgt cagcaacggt
     3601 catttcggcg cgggcgtgga atactacctg ccgctgtttt ttgaaaacga gttggaaacg
     3661 ctgtttgact atatcggcga agatgcgctg tttgtctctt taggcgatgt tcatgccgag
     3721 gcaaaccgtt tttggagcga tgtcaaatcg cgttacgcga tggcgcaggg cgacgaaacc
     3781 tatccgcctt tgcttccaca gtatttgtat ctctctgccg atgtgttcgc aggccgtctg
     3841 aaaaactacg gacaggtgct gcccgatgtt tccggcaagg aatacaccct gcccgacctt
     3901 gccgtcaacc gccaagcaga tgagccgttg caggcattga aggattttca gacggcgttt
     3961 gacggacgga ttttgctgtg cgccgaaagt ttgggacggc gcgaaactat gctcggtttc
     4021 ttgcagcaaa acggtttgaa agccaaaccc gtgtccgact ggcagggctt tttatcggca
     4081 cacgagccgc tgatgattac tgttgcgccg ttggcatacg ggttcaaact gggcgggctg
     4141 caatctccga gccaacagca agctgctccc gcctccgaag gagaaggcga tgcgattacc
     4201 gaccaaaccg aattttccgc atccgcaaca aaccctctcc ctagccctct cccacaggag
     4261 agggaacaaa gtaccgccgc catttcagac agtctgaaaa ccaaaagcag cctgtacccc
     4321 atcgaaaata gtctgcacgg gcaaatccaa cagcaacctg ccccctcccc cgtgggggag
     4381 ggttggggag agggcaaagc agttgccgct caaagtgcca tcgccgtcat caccgaatcc
     4441 gatctctacc aatacgtcgc ccgttcgcgc atccacaacc gccgcaagaa acacgccgcc
     4501 gtttcagacg acctgttgcg cgaccttgcc gaaatcaaca tcggcgaccc cgtcgtgcac
     4561 gaggaacacg gcatcggccg atatatgggc ttgataacaa tgaacttggg cggcgaaacc
     4621 aacgaaatga tgttgctcga atatgcgggc gaagcgcagc tttatgtgcc tgtttcgcaa
     4681 ctgcatttaa tcagccgcta ctccggtcag gcgcatgaaa acattgccct gcacaagctc
     4741 ggcagtggcg cgtggaacaa ggcgaagcgc aaagccgccg aaaaggcgcg cgataccgcc
     4801 gccgagttgc ttaaccttta cgcccgacgt gccgcccaat cgggacacaa gtttgaaatc
     4861 aacgagttgg attatcaggc gtttgccgac ggcttcggct acgaagaaac cgaagaccag
     4921 gccgccgcca tcgccgccgt gattaaagat ttgacgcagg cgaagccgat ggaccgcctc
     4981 gtgtgcggcg atgtcggttt cggcaaaacc gaagtcgccc tgcgcgccgc atttgtggcg
     5041 gtgatgggtg gcaaacaggt cgccgtactc gccccgacca cgcttctggt cgagcagcac
     5101 gcgcaaaact ttgccgaccg tttcgccgat ttccctgtga aagtcgccag cctttcgcgt
     5161 ttcaacaaca gcaaagccac taaagccgcg ctggaaggca tggcggacgg cacggtcgac
     5221 atcgttatcg gcacgcacaa actggtgcag gacgacatca aattcaaaaa cttaggttta
     5281 gtgattatcg acgaagaaca ccgcttcggt gtccgccaaa aagagcagct caaacgcctg
     5341 cgcgccaatg tggacatcct caccatgacc gccacgccga ttccgcgtac tttaagtatg
     5401 gcgttggaag gactgcgcga cttctcgctg attaccaccg cgcccagccg ccgcctcgcc
     5461 gtcaaaacct ttgtcaaacc ctttagcgaa ggcagcgtgc gcgaagccgt gttgcgcgaa
     5521 ctcaaacgcg gaggacaggt atttttcctg cacaatgaag tagatacgat tgaaaatatg
     5581 cgcgagcggc tggaaaccct gctgcccgaa gcccgcatcg gcgtggcgca cggacaactg
     5641 cgcgagcgcg agctggaaca agtcatgcgc gactttttgc agcaacgatt taacgtgttg
     5701 ctctgctcca ccatcatcga aaccggcatc gacatcccca acgccaacac catcatcatc
     5761 aaccgcgccg acaaattcgg gctggcgcaa ctgcaccagc ttcgcgggcg cgtcggccgc
     5821 agccaccatc aagcctacgc ctacctgctc acgcccgaat acatcaccaa agacgcagaa
     5881 aaacgcctcg acgccatcgc ggcggcagac gaactcggcg caggtttcac cctcgccatg
     5941 caggatttgg aaatccgcgg cgcaggcgaa atcctcggcg aagggcagtc cggtgaaatg
     6001 atgcaggtcg gcttcacgct ctacaccgaa atgctcaaac aggccgtgcg cgacctcaaa
     6061 aaaggccgcc aacccgacct cgatgcaccg ttgggcatta ccaccgaaat caaactgcac
     6121 agccccgccc tgctgcccga aagctactgc cccgacatcc acgaacggct cgtcctctac
     6181 aaacgcctcg ccgtctgcga aaccgtacag caaatcaatg ccatacacga agaactcgtc
     6241 gaccgcttcg gactgcccga gcaacccgtc aaaaccctta tcgaaagcca ccacttacgg
     6301 cttatggcaa aagaattggg tatcaatgcc attgatgcgg ccggcgaagc ggtaacggta
     6361 acctttggca aaaacaacaa tattgatcca accgaaatca tcctgctgat tcagaacgac
     6421 aaaaaatacc gccttgccgg cgccgataag ctgcggttta ccgcagagat ggaaaatatc
     6481 gaggtcagaa tcaacaccgt aaaaaacgtt ttaaaaacct tgcaaaacag atgcctgccc
     6541 aaataaagcc gacaccgcaa tgctgtctga aacaccgttt tccttgtccg aaagccgcca
     6601 ttatgaattt gaaggaaact ccactataat acggcattca gattttcaga cggcatcgcg
     6661 cccgtcaaac cgcacacaaa ccaaaaggaa atacatgttc cgtactatgc ttggcggaaa
     6721 aatccaccgc gccaccgtta ccgaagccga tttaaactat gtcggcagca ttaccgtcga
     6781 tcaagacctg ttagacgcgg caggcatcta ccccaacgaa aaagtcgcca tcgtcaacaa
     6841 caacaacggc gaacgttttg aaacctatac cattgcaggg aaacgcggca gcggcgtgat
     6901 ttgtctgaac ggtgctgcgg caaggctggt gcagaaaggc gatatcgtca tcatcatgtc
     6961 ttacgtccaa ctctccgaac ccgaaatcgc cgcgcatgaa cccaaagtcg tcttggtaga
     7021 cggaaacaac aaaatccgcg acatcatctc ctatgagccg ccgcacaccg tgctgtaatt
     7081 ccgcaaacgg acatcgatta tggatattaa aatcaacgac ttcaccctcg gcaacaactc
     7141 gcccttcgtc ctattcggcg gcatcaacgt tttggaaagc ttggattcca ccctccaaac
     7201 ctgtgcgcat tacgtcgaag ttacccgaaa actcggtatt ccctatatct ttaaagcctc
     7261 tttcgacaag gcaaaccgtt cctccatcca ttcttatcgc ggcgtaggct tggaagaagg
     7321 cttaaagatt tttgaaaaag tcaaagcaga gttcggcatc cccgtcatta ccgacgtaca
     7381 cgaaccccat cagtgccaac ccgtcgccga agtgtgcgat gtcatccagc ttcccgcctt
     7441 tcttgcgcgg cagaccgatt tggtggccgc aatggcggaa acgggcaatg tcatcaacat
     7501 caaaaaacct cagttcctca gcccctctca aatgaaaaac attgtggaaa aattccacga
     7561 agccggcaac gggaaactga ttttatgcga acgcggcagc agcttcggct acgacaacct
     7621 cgttgtcgat atgctcggtt tcggcgtgat gaaacagact tgcggcaacc tgccggttat
     7681 tttcgacgtt acccattccc tgcaaacccg cgatgctggt tctgccgcat ccggcggtcg
     7741 tcgcgcacaa gctttggatt tggcacttgc aggcatggca acccgccttg ccggcctgtt
     7801 cctcgaatcg caccccgatc cgaaactggc aaaatgcgac ggccccagcg cgctgccgct
     7861 gcacctttta gaagattttt taatccgcat caaagcattg gacgatttaa tcaaatcaca
     7921 accgatttta acaatcgagt aacacggttt cgccttatga tgcagacttt ccgaaaaatc
     7981 agcctgtatg ccgcaacctt atggctcggt atgcagatta tggcgggtta tatcgtcgcg
     8041 ccggtgctgt tcaaaatgct gcccaaaatg caggcgggcg aaattgccgg cgtattgttc
     8101 gacatcctct cttggagcgg gcttgccgtt tggggcgcgg tactggctgc cgcctttgcc
     8161 gccctaaccc ggcggcaaac cgccctgctg ctttttttat tgtccgccct tgccgccaac
     8221 cgattcttga ttacacccgt tatcgaggcg ctgaaatacg ggcatgagaa ttggctgttg
     8281 tcggctttgg gcggatcttt cggaatgtgg cacggcattt ccagtattgt ttttatggcg
     8341 gccgccctac tttcgattta cttaagttgg cggctctacg gcaaaaatgc cgtctgaagc
     8401 ctaccgtttt acctcacgtc actttaattt ggagaatatt tatgagcgca atcgttgata
     8461 tttttgcccg cgaaattttg gactcacgcg gcaacccaac cgtagaatgc gacgtactgt
     8521 tggaatccgg cgtcatggga cgcgcagccg taccaagcgg cgcatcaacc ggtcagaaag
     8581 aagctttaga acttcgcgac ggcgacaaat cccgttactt gggcaaaggc gtattgaaag
     8641 ccgttgacca cgtcaacaac caaatcgcgc aagccctcat cggtatcgat gccagcgaac
     8701 aatcttatat cgaccaaatc atgatcgaat tggacggtac tgaaaacaaa ggtaacttgg
     8761 gtgccaacgc gactttggcc gtttctatgg ccgtagcacg cgcagccgct gaagatgcag
     8821 ggctgccgct ttaccgctac ttgggcggcg caggtccgat gtccctgccc gtaccgatga
     8881 tgaacgtcat caacggcggc gaacacgcca acaacagcct gaacatccaa gagtttatga
     8941 ttatgcccgt cggcgcaaaa tctttccgcg aagcgttgcg ctgcggtgcg gaaattttcc
     9001 acgccttgaa aaaactgtgc gacagcaaag gcttcccgac cacagtcggc gacgaaggcg
     9061 gtttcgcccc caacctgaac agccacaaag aagccctgca actgatggtt gaagccaccg
     9121 aagccgccgg ctacaaagcg ggcgaagacg tattattcgc attggactgc gcgtccagcg
     9181 agttctacaa agacggcaaa taccacttgg aagccgaagg ccgctcctac accaacgcgg
     9241 aatttgccga atatctggaa ggcctggtca acgagttccc catcatctcc atcgaagacg
     9301 ggatggatga aaacgactgg gaaggctgga aactgctgac cgaaaaactg ggcggcaaag
     9361 tccaactcgt tggcgacgac ctcttcgtta ccaacccgaa aatccttgcc gaaggcattg
     9421 aaaaaggcgt ggcaaacgca ctattggtca aagtcaacca aatcggtact ttgagtgaaa
     9481 ccctgaaagc cgtcgactta gccaaacgca accgctacgc cagcgtaatg agccaccgct
     9541 ccggcgaaac cgaagacagc accattgccg acttggcagt cgccaccaac tgtatgcaga
     9601 tcaaaaccgg ttctttgagc cgttccgacc gcatggcgaa atacaaccaa ctgctgcgta
     9661 tcgaggaaga attggcggaa gccgccgact accccagcaa agccgcattc taccaactgg
     9721 gcaaataaaa aaggttaagg tatgaagtgg gtaactgtcg ttttatcctt cgcacttgtc
     9781 tgttgccaat acagcctctg gttcggcaaa ggcagcatcg gacgcaacag cagtctgaga
     9841 gaacagattg ccgttcaaga agaaaaaaac cagacactcg ccctacgcaa tcattccctt
     9901 gccgccgaag tctatgattt ggaaaacggt caagaagcca tttcggaaat cgcccgggta
     9961 gaactgggtt atatccaaga cggtgaaacc ttttaccgac tcatcaggca taaccggtaa
    10021 taccgtcaaa aagccgtccg aaccaatgtt cggacggctt ttatttcaac aaactgtcag
    10081 acagcccctc atcctccccc gacaaaccgc aatccagcct gacatccccc tcgacgcaac
    10141 agcagcacgg cagtatctcg tcccgcccca aaaaagccaa aggcggctcc cgataagtaa
    10201 cgcttccctc caaaatcttc actcggcacg atccgcaata tccgcttcgg cactgatatt
    10261 ccaccatatg ccccgtccgt tccaagcctt ccaacagggt ctcgccctcc aagagctcaa
    10321 aaaaaccctt attcgtacca atgcgcgcca tttccgacca atcaaa
//
LOCUS       DAWITQ010000062        10257 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.062, whole genome shotgun sequence.
ACCESSION   DAWITQ010000062 DAWITQ010000000
VERSION     DAWITQ010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10257)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10257)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10257
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.062"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..141
                     /locus_tag="WIX18_001172"
     CDS             <1..141
                     /locus_tag="WIX18_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transporter"
                     /protein_id="HEZ5238283.1"
                     /translation="VGIGSGALLGHWVTQYVGISRIGIAGMLAAAAGLWLCLNLNRHI
                     RT"
     gene            270..1706
                     /locus_tag="WIX18_001173"
     CDS             270..1706
                     /locus_tag="WIX18_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HEZ5238284.1"
                     /translation="MPLLSVEFALFFLAFLPIYWGLAKYPSVQNLLLLAAGMGWLYHI
                     GPVFAAIVVLYSSCVYLLGELLRSDRENTRRFWLGCGIAVSLTVLGFFKYFDFFRPLI
                     AQYAGQGGAIDILMPLGLSYYTFQSLAYLVYCFRAPHAARFEWHELLLHLSFFPTVTS
                     GPIIRAAAFKSADGEQAGALAQIRTRQPRSPVRPALAVSLILLGIAKKWWLAGMLAEN
                     WVSPVFENPAQFDGWGVLGGVYGYTFQLFLDFSGYSDLVIGMAMLLGFRLPKNFSAPL
                     RALNIRAFWDKWHISLSTWIRDYIYIPLGGSKKGFLRTQLNLMAAMVLSGIWHGYGWN
                     FLIWGALHGTALVLLNTGDRYFGRNALCRLKYLAPLSWFVTFHFVCLSFVVFNTASPD
                     DAGAVFNALFANANGWNAPQQANMLLLASFASVMLLYPYLQRAFDGAVKGLEKIPMWL
                     WFIPVSAVLLLIIVLAPSGIPGFIYANF"
     gene            1717..2700
                     /locus_tag="WIX18_001174"
     CDS             1717..2700
                     /locus_tag="WIX18_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF459 domain-containing protein"
                     /protein_id="HEZ5238285.1"
                     /translation="MKNFLSLFASILMSALIAVWFSQNPINAYWQQTYHRNSPLEPLA
                     AYGWWRSGAALQENAYTFSDGIKAFLSGETPSTAQGGGSADMPSEAAASEAVPQTGKT
                     EWKQDTEAAAVRSGDKVFFAGDSLMQGVAPFVQKSLKQQYGIESVNLSKQSTGLSYPS
                     FFDWPKTIEETLKKHPEISVLAVFLGPNDPWDFPVGKRYLKFASDEWAQEYLKRVDRI
                     LEAAHTHRVQVVWLGIPYMKKAKLDGQMRYLDKLLSEHLEGKIILIPTAHTLSGGEDR
                     YTDSVNVNGKPVRYRSKDGIHFTAEGQKLLAAKIMEKIVFEPSTQPSSTQP"
     gene            2697..3890
                     /locus_tag="WIX18_001175"
     CDS             2697..3890
                     /locus_tag="WIX18_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEZ5238286.1"
                     /translation="MNPKHLIAFSALFAATQAEALPVASVSLDTVTVSPSAPYTDTNG
                     LLTDYGNAAASPWMKKIRSVAQGSGETFRILQIGDSHTAGDFFTDSLRKRLQKTWGDG
                     GIGWVYPANVKGQRMAAVRHNGNWQSLTSRNNSGDFPLGGILAHTGSGGSMTLTASDG
                     KTGKQRISLFAKPLLAEQTLTVNGNTVSANGGGWQVLDTRAALPLTIQTEMPWDIGFI
                     NIENPAGGITVSAMGINGAQLTHWSKWRADRMNDLAQTGADLVILSYGTNEAFGDNID
                     IADTEQKWLDTVRQIRDSLPAAGILIIGAPESLKNTLGVCGTRPVRLTEVQQMQRRVA
                     RQGQTMFWSWQNAMGGICSMKNWLNQGWAAKDGVHFSAKGYRRAAEMLADSLEELVRA
                     AAIRQ"
     gene            complement(3950..4126)
                     /locus_tag="WIX18_001176"
     CDS             complement(3950..4126)
                     /locus_tag="WIX18_001176"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238287.1"
                     /translation="MPSENGRRQFIIFAFRRHIKRRLCAVCRRFACVLPMPEANAGCI
                     WQTVRGVAMPSEAI"
     gene            4177..5730
                     /locus_tag="WIX18_001177"
     CDS             4177..5730
                     /locus_tag="WIX18_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase"
                     /protein_id="HEZ5238288.1"
                     /translation="MNRTYANFYEMLTTACRKNGNGTAVFDGKEKTAYRALKQEAEAV
                     AAYLQNIGVKFGDTVALAVSNSTEFITAYFAISAIGAVAVPMNTFLKNSEYAYILNDC
                     KARFLFASAGLSKELAGLKAQTPVEKIIWTDKSRPAGEMAEGDAFFEDVRRFPEKPDL
                     GRQPRINDLAHIIYTSGTTGHPKGALISYANLFANLNGIERIFKISKRDRFIVFLPMF
                     HSFTLTAMVLLPIYMACSIILVKSVFPFSNVLKQALLKRATVFLGIPAIYTAMSKAKI
                     PWYFRWFNRIRLFISGGAPLAEQTILDFKAKFPRAKLLEGYGLSEASPVVAVNTPERQ
                     KARSVGIPLPGLEAKAVDEELVEVPRGEVGELIVRGGSVMRGYLNMPAATDETIVNGW
                     LKTGDFVTIDEDGFIFIVDRKKDLIISKGQNVYPREIEEEIYKLDAVEAAAVIGVKDR
                     YADEEIVAFVQLKEGMDLGENEIRRHLRTVLANFKIPKQIHFKDGLPRNATGKVLKRV
                     LKEQFDGNK"
     gene            complement(5820..7847)
                     /locus_tag="WIX18_001178"
     CDS             complement(5820..7847)
                     /locus_tag="WIX18_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HEZ5238289.1"
                     /translation="MSLSEFIERRTSFNPMVILTTLFFVCVLAVLVLTVPDQVQMWLD
                     RAKEVIFTEFGWFYVLTFSIFLGFLLILSVSSLGNIRLGRDEDVPEFGFLSWLAMLFA
                     AGMGVGLMFFGVAEPLMHYFSDITAGTPEHRQQQALLHTVFHWGVHAWSVYGTIALAL
                     AYFGFRYKLPLALRSCFYPLLKEKISGRFGDAIDIMALLATFFGIITTLGFGASQLGA
                     GLQEMGWIAENSFSVQVLIIAAVMSLAVVSAISGVGKGVKVLSELNLSLAFLLLFFVL
                     AAGPTVYLLSAFGDNIGNYLENLVRLSFKTYAYEREHKPWFESWTVLYWAWWCSWAPF
                     VGLFIARISKGRTIREFVFGVLLIPGLFGVLWFTVFGNTAIWLNDGVAGGMLEKMTSS
                     PETLLFKFFNYLPLPELTSIVSLLVISLFFVTSADSGIYVLNNITSRDKGLSAPRWQA
                     VMWGVLMSAVAVLLMRSGGLGNLQSMTLIVSLPFALLMLIMCFSLWKGLSADKKYFET
                     RVNPTSVFWTGGKWKERLVQIMSQTQEQDILKFLKHTASPAMHELQRELSEEYGLSVR
                     VDKMFHQDEPAIEFVIRKETMRDFMYGIKSVGQDVSDQLINDGKLPHIRHQTTYKPYA
                     YFFDGRVGYDVQYMNKDELIADILKNYERYLMLLDDVGQELMAHEQVELAE"
     gene            8136..10142
                     /locus_tag="WIX18_001179"
     CDS             8136..10142
                     /locus_tag="WIX18_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific recombinase"
                     /protein_id="HEZ5238290.1"
                     /translation="MADMKKITPQNLRPLLSESLGHTDFVNVLNALIKFLRRGGKKCA
                     GERFDLIIDTFKQDRELLSRFSRCFYIWLAQIHIYPALIKLGIFSRHSFAREMGIRIY
                     ERFSPSYKDFANLGEVFLYLFHSENDDKWLQTLNIRQWLVLYELIRSHAEPSKLQTAG
                     IRLADARLRAIEMLSVWTASEAIEPDLIRIAPRLLEADSSFVALQRETAKLVEHYRNG
                     TAPYDTAHLEVMFDQCFSQIDYLRRKGTGAGSGSSVKVAHLLERLRQTVGRLKLLTDI
                     QTGVGNSNRLTIALMNSLIYAAVEQYSTRHLRRSSIRMLARSITENKSHHGEHYITRN
                     RKEYFKMFYSAAGGGIIIALMALLKIRIGSLGLSPFLTSLSAGFNYGIGFMIIHMLHC
                     TVATKQPAMTAASFAEQVDLNEGGKAVDNKLAKLLIDVCRSQSVAVFGNVSIAILLAC
                     AISFGYAHLYRLPILDAHTAAYQFKSIDIIAYPTLWYAAIAGLWLFCSGIIAGFFDNR
                     ADYLNLRQRLPFNPLLRKIMRPGPRRVLAAYIHKHYGSLVGNFIFGMLLGMTGYFGHL
                     LGLPLDIRHVAFSSANLGYAAVSGNVGLGTFVLGIFSVLTIGLVNLCVSFSLALFVAL
                     RSRGTKIGSIRNLIKSFWNQIKSNPCILFLPPAKEQGHPPSDKP"
BASE COUNT         2446 a         3208 c         2483 g         2120 t
ORIGIN      
        1 gtcggtatcg gcagcggcgc actgttggga cattgggtaa cgcaatatgt cggtatttcc
       61 cgtatcggca tcgccggtat gcttgcggcg gcggccgggc tgtggctgtg cctgaacttg
      121 aaccgccata tccgaacctg acccgctatg ccgtctaaag cctctcccgc ccttcagacg
      181 gcattttgat tgaagaaata tccgcccctg cttaaaataa cgggctttgc cgtgttttaa
      241 cgcctatttt cttattccaa ggatggttta tgccgctgct gtctgtcgag ttcgcactgt
      301 tctttctcgc cttcctgccg atttactggg gcttggcgaa atacccgtcc gtccaaaacc
      361 tgctgctttt ggctgccggt atgggctggc tctaccatat cggccccgta tttgcggcaa
      421 tcgtcgtcct ttattcctcc tgcgtgtacc ttttgggcga actgctccgt tccgatcgcg
      481 aaaatacgcg ccgcttttgg ctggggtgcg gcattgccgt ctcgctgacc gtcttgggct
      541 ttttcaaata tttcgacttt ttccgcccgc tgattgcaca atatgccgga caaggcggcg
      601 caatcgacat cctgatgccg ctggggcttt cgtattacac cttccagtcg ctcgcctatc
      661 tagtttactg cttccgcgcc ccgcacgccg cgcgtttcga gtggcacgag ctgctgctgc
      721 acctgagttt tttccccacc gttacctccg gcccgattat ccgcgccgcc gcattcaaaa
      781 gcgcagacgg cgagcaggcg ggcgcattgg cgcaaatccg tacccgccaa ccgcgctcac
      841 ccgtccgccc cgcactcgcc gtttccctga ttctgctggg tattgccaaa aaatggtggc
      901 tggcggggat gctggcggaa aactgggtgt cgcccgtatt tgaaaatccc gcccaattcg
      961 acggctgggg cgtattgggc ggcgtgtacg gctatacctt ccaactcttt ttagactttt
     1021 ccggatattc cgatttggtt atcggcatgg cgatgctgct gggtttccgg ctgcccaaaa
     1081 acttctccgc accgcttcgt gctttaaaca tccgcgcatt ttgggacaaa tggcacatca
     1141 gcctttccac ctggatacgc gactacatct acatcccctt gggcggcagc aaaaaaggct
     1201 ttttacggac acagctcaac ctgatggcgg caatggtact ctcaggcatc tggcacggct
     1261 acggctggaa cttcctcatt tggggcgcgc tgcacggcac ggcactggtg ctgctcaaca
     1321 cgggcgatcg ctatttcgga cgcaacgcgc tatgccgtct gaaatacctt gcgccgctct
     1381 cgtggtttgt taccttccat ttcgtctgcc ttagctttgt tgtcttcaat accgcaagcc
     1441 ccgacgatgc aggcgcagtt ttcaatgccc tctttgccaa tgccaacggc tggaatgcgc
     1501 cgcaacaggc aaacatgctg ctgcttgcct cgtttgcatc cgtgatgctg ctctaccctt
     1561 acctgcaacg cgctttcgac ggcgcggtca aaggtttgga aaaaatcccg atgtggctgt
     1621 ggtttatccc cgtttccgcc gtcctgctgc tgattatcgt attggccccc tcggggattc
     1681 ccggctttat ttatgccaat ttttaagggt ttggacatga aaaactttct ttcccttttc
     1741 gcctccatac tgatgtctgc cctgattgcc gtgtggttca gccaaaaccc catcaacgcc
     1801 tactggcagc agacctacca ccgcaacagt ccgctcgaac cgcttgccgc ctacggatgg
     1861 tggcggagcg gtgcggcgtt gcaagaaaac gcctacacct tttcagacgg catcaaagcc
     1921 ttcctgtccg gcgaaacgcc gtcgacggct caaggcggcg gttcggcaga tatgccgtct
     1981 gaagccgccg catcagaagc cgtccctcaa accggtaaaa cagaatggaa acaagacacc
     2041 gaagccgccg ccgtccgcag cggcgacaaa gtcttttttg ccggcgactc gctgatgcag
     2101 ggcgttgcac ccttcgtgca aaaaagcctg aaacagcaat acggcatcga atccgtcaac
     2161 ctcagcaaac aaagcacggg gctgtcctac ccctcattct tcgactggcc gaaaacgatt
     2221 gaagaaaccc tgaaaaaaca tcccgaaatc agcgtgctcg ccgtcttcct cggcccgaac
     2281 gacccgtggg atttccccgt cggcaaacga tacctcaaat tcgcttccga cgaatgggcg
     2341 caagaatacc tgaaacgcgt cgaccgcatc cttgaagccg cacacacgca ccgcgtccaa
     2401 gtcgtctggc tcggcatccc ctatatgaaa aaagccaagc tcgacgggca gatgcgctac
     2461 ctcgacaaac tgctttcgga acacctggaa ggcaaaatca tcctgattcc caccgcgcac
     2521 accctgagcg gcggggaaga ccgctacacc gactccgtca acgtcaacgg caaacccgtc
     2581 cgctaccgca gcaaggacgg catacacttt accgccgaag gacaaaaact gctggcggca
     2641 aaaataatgg aaaaaatcgt ttttgaacca agtacgcaac catcaagtac acagccatga
     2701 accccaaaca cctcatcgca ttttccgccc tgttcgccgc cacgcaggca gaagccctgc
     2761 ccgtcgcctc cgtcagcctc gacaccgtta ccgtttcccc gtccgccccc tacaccgata
     2821 caaacgggct cttgaccgac tacggcaacg ccgccgcctc gccttggatg aaaaaaatcc
     2881 gatccgtcgc acaaggcagc ggcgagacct tccgcatcct gcaaatcggc gactcgcata
     2941 ccgccggcga cttctttacc gacagcctgc gcaaacgcct gcaaaaaact tggggcgacg
     3001 gcggcatagg ctgggtttac cccgccaacg tcaaagggca gcgcatggcg gcagtccggc
     3061 acaacggcaa ctggcaaagc ctcaccagca ggaacaatag cggagacttc ccgctcggcg
     3121 gcatcctcgc ccacaccggc agcggcggca gcatgaccct gaccgcatcg gacggcaaga
     3181 ccggcaaaca gcgcatttcc ctgtttgcca aacccctgct cgccgaacaa accctgaccg
     3241 tcaacggcaa caccgtctcc gccaacggcg gcggctggca ggtactggat acccgcgcgg
     3301 cactgccctt gaccatacag accgaaatgc cgtgggacat cggcttcatc aacatcgaaa
     3361 atcccgccgg cggcattacc gtttccgcca tgggcatcaa cggcgcacaa ttgacccatt
     3421 ggtcgaaatg gcgtgccgac cgtatgaacg accttgccca aaccggcgcc gatttggtta
     3481 tcctttccta cggcaccaac gaagccttcg gcgacaacat cgacattgcc gacaccgaac
     3541 aaaaatggct ggataccgtc cgccaaatcc gcgacagcct gcctgccgcc ggcatcctca
     3601 tcatcggcgc acccgaatcc ctgaaaaaca cgctcggcgt atgcggcaca cgccccgtcc
     3661 gcctgaccga agtccaacag atgcagcggc gcgtcgcccg acaggggcag acgatgttct
     3721 ggtcttggca aaacgccatg ggcggcatat gcagcatgaa aaactggctc aaccaaggat
     3781 gggccgccaa agacggcgta cacttctccg ccaaaggcta ccggcgcgcg gcggaaatgc
     3841 tcgccgacag cctcgaagaa ctcgtccgcg ccgccgcaat caggcaataa tcggacaggg
     3901 ggcggacggt atttccgcaa cagggggatg ccgtctgaaa cgcatacctt catattgctt
     3961 cagacggcat agccaccccg cgcacggttt gccagatgca accggcattc gcctcaggca
     4021 tcggaaggac gcaggcgaac ctccggcata cggcgcaaag gcggcgtttg atatgccgtc
     4081 tgaaggcaaa gatgataaac tgccgccttc cgttttcaga cggcatattg ttttcaaatg
     4141 agggcgttcg ccgtccgcaa ccataaagga agtttcatga accggactta tgccaatttc
     4201 tacgaaatgc tgaccaccgc ctgccgcaaa aacggcaacg gcacggcagt gttcgacggc
     4261 aaggaaaaaa ccgcctaccg cgcgctcaag caggaggccg aagccgtcgc ggcgtatctg
     4321 caaaatatcg gcgtgaagtt cggcgacacg gtcgcgctgg cggtttccaa ttccacagaa
     4381 tttattaccg cctatttcgc catctccgcc atcggcgcgg tcgccgtacc gatgaacaca
     4441 tttttgaaaa acagcgaata cgcgtatatc ctgaacgact gcaaggcgcg cttcctgttc
     4501 gcctcggcgg gcctgtcaaa agagttggcg ggcttgaagg cgcaaacgcc cgtcgaaaaa
     4561 atcatttgga cggacaaaag ccgtccggcc ggcgaaatgg cggaaggcga tgcctttttt
     4621 gaagacgtgc gccgcttccc cgaaaaaccc gacttgggcc gccaaccccg gataaatgat
     4681 ttggcacaca tcatctacac ctccggcacg acggggcatc ccaaaggcgc gctaatcagt
     4741 tacgccaacc tgttcgccaa cctgaacggc atcgaacgca tctttaaaat ctccaagcgc
     4801 gaccgcttta tcgttttcct gccgatgttc cacagcttca cgctgacggc tatggtgctg
     4861 ctgccgattt atatggcgtg ttcgattatt ttggtcaaat ccgttttccc gttttccaac
     4921 gttttgaaac aggccctgct caaacgcgcg accgtgtttt tgggcatacc cgcgatttac
     4981 accgcaatga gcaaggcgaa aatcccttgg tatttcagat ggttcaaccg cattcgcctg
     5041 tttatcagcg gcggtgcgcc tttggcggaa caaaccatcc tcgatttcaa agccaagttc
     5101 ccccgcgcca aattgctgga aggctacgga ctgagcgaag cctctcccgt cgtcgccgtc
     5161 aatacgcccg agaggcaaaa agcccgcagc gtcggcatcc ccctgcccgg tttggaagcc
     5221 aaagccgtcg atgaagaatt ggtcgaagtg ccgcgcggcg aagtgggcga actgatcgtc
     5281 aggggcggtt cggtgatgcg gggctacctc aatatgcctg ccgccaccga tgaaaccatc
     5341 gtcaacggct ggttgaaaac gggcgatttc gttaccatag acgaagacgg ctttatcttt
     5401 atcgtcgacc gcaaaaaaga tttgattatt tccaaaggtc aaaacgtcta tccgcgcgaa
     5461 atcgaagaag aaatctacaa actcgatgcc gtcgaagccg ccgccgtcat cggcgtgaaa
     5521 gaccgttatg ccgacgagga aatcgtcgcc ttcgtccaat tgaaggaagg tatggatttg
     5581 ggcgagaacg aaatccgccg ccacctgcgt accgtgctgg caaatttcaa aatccccaaa
     5641 caaatccact ttaaagacgg gctgccgcgc aacgctacgg gcaaggtatt gaaacgggtg
     5701 ttgaaggagc agtttgacgg aaacaaatga acgccgtgcc gtccgaagcc ccgtccggca
     5761 aaaaaaatgc ggtgaatctg cttcaccgca ttttttggca aacgccggag cgaggatatt
     5821 tactctgcca attccacctg ctcgtgcgcc atcagttcct gaccgacatc atccaacaac
     5881 atcaaataac gttcgtagtt tttcaaaatg tcggcaatca gctcgtcctt gttcatatac
     5941 tgcacatcgt acccgacgcg cccgtcgaaa aaataagcgt agggtttgta agttgtctga
     6001 tgccggatat gcggcagctt gccgtcgtta atcaactggt cggatacatc ctgcccgaca
     6061 gacttaatcc cgtacataaa atcgcgcatc gtctctttcc gaatgacgaa ctcgattgcg
     6121 ggctcgtcct gatgaaacat cttatcgacc cggacgctca agccgtattc ttccgaaagc
     6181 tcccgttgca actcgtgcat agcgggcgat gcggtatgtt tgaggaattt taaaatatcc
     6241 tgctcctgcg tctggctcat tatctgcacc agccgttctt tccacttgcc gcccgtccaa
     6301 aatacactgg tagggttaac ccgggtctca aaatatttct tatccgcact caatcctttc
     6361 cacaggctga aacacattat cagcatcagc agggcaaacg gcagggaaac aatcagggtc
     6421 atagactgca ggttgcctag cccgcccgag cgcatcagca aaacggcaac ggcagacatc
     6481 agcacgcccc acataaccgc ctgccaccgt ggtgcgctca agcccttgtc ccgagaggta
     6541 atattgttca ggacataaat cccggaatcg gcagaagtta caaaaaacag ggaaatgacc
     6601 agcaggctga cgatgctcgt caattcgggc agggggaggt aattaaagaa tttaaaaagc
     6661 agcgtttccg gagaggaggt catcttttcg agcattcccc ccgcaacccc gtcattcagc
     6721 caaatcgccg tattgccgaa gacggtaaac cacaaaacgc cgaacaggcc ggggatgagc
     6781 aaaaccccga agacaaactc gcggatggtg cgcccctttg aaatacgcgc gataaacaaa
     6841 cccacaaacg gcgcccaaga acaccaccac gcccaataaa gcaccgtcca agattcaaac
     6901 cacggcttgt gttcccgttc gtacgcataa gttttaaaac tgaggcgcac cagattttcg
     6961 aggtagttcc ctatgttgtc gccgaatgcc gacaacaggt aaacagtggg gcccgccgcc
     7021 aaaacaaaaa acagcagcaa aaacgcaagg ctcaggttca actcgctcaa caccttcacg
     7081 cccttcccca cgccggatat tgccgaaacg acggcgaggg acatgacggc ggcgataatc
     7141 aaaacctgca cgctgaagct gttttcggca atccagccca tttcctgcaa tccggcgccc
     7201 agttgcgaag ccccgaaccc caatgtggtg atgatgccga aaaaagtagc aagcaacgcc
     7261 ataatatcaa tggcatcgcc gaaccttccg gaaatttttt ctttcaacag ggggtaaaaa
     7321 caagaacgca gggcaagcgg cagcttgtag cggaaaccga aataagccaa agccaatgca
     7381 atcgtaccgt acaccgacca agcgtgaacg ccccaatgga acaccgtgtg cagcaatgcc
     7441 tgctgctgcc tgtgttccgg cgtgccggcc gtaatgtccg aaaaataatg catcaacggc
     7501 tctgccacgc cgaaaaacat cagacccacg cccatcccgg ccgcaaacag catcgccagc
     7561 cacgacagga agccgaattc cggcacatct tcatcccgtc cgagcctgat gtttcccaaa
     7621 ctgctgaccg agagtatcag caggaaaccc agaaaaatgg aaaacgttaa aacataaaac
     7681 cagccgaact cggtaaaaat gacttctttt gcccgatcga gccacatctg cacctgatcc
     7741 ggcacggtta aaaccaatac cgccaaaaca cacacaaaaa acaaagtcgt caaaataacc
     7801 atcggattaa atgacgttcg gcgttctata aattcagaca gggacaaacc ttctcactcc
     7861 tttgttaaaa acagacaaac ccggtcatcg ggcaaagcgg tcaaaacctg ccggtaaaat
     7921 accggcttcc ggatgacgaa atgcacaaac cggccgaaat tgttataatc gaaaaaatta
     7981 aaaatcaata cggattattc tatcagattg atttatcgat atttattata tcattaatat
     8041 agtttgattt caaaccggcg gaaaatgcgc cgcccaccgc aggcgcgccc tccccgctat
     8101 cggggcgttt aacgccggat tgccgatgcg gtacaatggc tgatatgaag aaaattaccc
     8161 ctcaaaacct gcgccccctg ctttcggaaa gcttgggaca taccgatttt gtcaacgtcc
     8221 tcaacgcact gattaaattt ttgcgccgtg gcggcaaaaa atgtgcgggg gaacgtttcg
     8281 acctgattat cgacacattc aaacaagaca gggaattact gtcccgcttc agccggtgtt
     8341 tttacatctg gctcgcgcaa atacacattt atccggcact catcaaactc ggcatcttct
     8401 cgcgccacag ctttgcccgg gaaatgggca tacgcatcta cgaacgcttc agcccgtcat
     8461 ataaagattt tgccaacttg ggcgaagtct tcctttatct tttccattcc gaaaacgacg
     8521 acaaatggct gcaaacgctc aatatccgcc aatggctggt tttatacgaa ctcatccgga
     8581 gccacgccga gccgtccaaa ttgcagacgg cgggcatccg ccttgccgat gcgcgtttgc
     8641 gcgccatcga aatgctgtct gtctggacgg catccgaagc catcgaaccc gacctcatcc
     8701 gcatcgcccc gcgcctgctg gaggccgatt cttccttcgt cgccctccaa cgcgaaaccg
     8761 ccaaactggt cgaacactac cgcaacggca ccgcgcctta cgacaccgcc cacctcgaag
     8821 tgatgttcga ccaatgtttc agccagattg actatttgcg ccgcaaaggg acgggcgcag
     8881 gctccggttc gtcggtcaaa gtcgcccacc tgctcgaacg gctccggcaa accgtaggcc
     8941 gtctgaagct gcttaccgac atccaaaccg gtgttggcaa cagcaaccgc ctgaccatcg
     9001 cgctgatgaa ctccctcatc tacgcggcag tcgaacaata cagcacccgc cacctgcgcc
     9061 gcagcagcat ccgtatgctc gcccgcagca ttaccgaaaa caaaagccac cacggcgaac
     9121 actacatcac ccgcaaccgc aaagaatatt tcaaaatgtt ctactcggcg gcaggcggcg
     9181 gcatcatcat cgccctgatg gcgctgctca aaatccgcat cggctcactc ggcctcagcc
     9241 ccttcctcac ttccttgtcg gctgggttca actacggcat cggctttatg atcatccata
     9301 tgctgcactg caccgtcgcc accaagcagc ccgcgatgac tgccgccagc tttgccgaac
     9361 aggtcgatct caacgaaggc ggcaaagcgg tggacaacaa actcgccaag ctcctcatcg
     9421 acgtatgccg ctcccaaagt gtcgccgtct tcggcaacgt ttccatcgcc atccttttgg
     9481 cgtgcgccat atcgttcggc tatgcccatc tgtaccggct gcccatactc gatgcccaca
     9541 ccgccgccta ccagttcaaa tccatagaca tcatcgctta cccgacgctg tggtatgccg
     9601 ccattgcagg tctgtggctg ttctgctccg gcatcatcgc aggttttttc gacaaccgcg
     9661 ccgactacct caacctgcgc caacgcctgc ccttcaaccc cttgctgcgt aaaatcatgc
     9721 gccccgggcc ccgccgcgtc ctcgccgcct acatccacaa acactacggc tcgttggtag
     9781 gcaacttcat cttcgggatg ctcttgggta tgaccggcta tttcggacac ctcctcgggc
     9841 tgccgctgga catccgccac gtcgcctttt cctccgccaa cctcggctat gccgccgtca
     9901 gcggcaacgt cggtttgggc acgttcgtac tcggcatttt cagcgtcctc accatcggcc
     9961 tggtcaacct ctgcgtcagt ttcagcctcg ccctcttcgt cgccctgcgc tcgcgcggca
    10021 cgaaaatcgg cagcatccgc aatctgatta agagtttttg gaatcagatt aaaagcaatc
    10081 cctgcatact tttcctcccg cccgccaaag aacagggaca tcctccttcg gacaagcctt
    10141 gaccggcaat gccgtctgaa gcgggcttct ccccgaatac cgccctgatg cggaaaatcc
    10201 ccataaaagg atgcaaaaat gccgtctgaa ccgaaacgtg gttcagacgg catttta
//
LOCUS       DAWITQ010000063        10191 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.063, whole genome shotgun sequence.
ACCESSION   DAWITQ010000063 DAWITQ010000000
VERSION     DAWITQ010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10191)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10191)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10191
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.063"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            83..322
                     /locus_tag="WIX18_001180"
     CDS             83..322
                     /locus_tag="WIX18_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238291.1"
                     /translation="MNVWDIWGRMVEIYHKYKKPCLVLAVDFVMGMVFIEPNEEPCIG
                     RCYAPMSESPDFANAVAMAVAMICIVWIAVLSMTD"
     gene            536..1837
                     /gene="bioA"
                     /locus_tag="WIX18_001181"
     CDS             536..1837
                     /gene="bioA"
                     /locus_tag="WIX18_001181"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HEZ5238292.1"
                     /translation="MPSEHQHTSSLLDFDRTHLLHPYTSMTDPLPVYPVKRAEGVFIE
                     LADGTRLVDGMSSWWCAIHGYNHPVLNQAVETQIKQMSHVMFGGLTHEPAVELGKLLV
                     GILPQGLDRIFYADSGSVSVEVALKMAVQYRQVRGLTAKQNIATVRRGYHGDTWNAMS
                     VCDPETGMHHIFGSALPQRYFVDNPTSRFDDEWDEADLQPVRALFEVHHADIAAFILE
                     PVVQGAGGMYFYHPQYLRGLRDLCDEFDIVLIFDEIATGFGRTGKMFACEHAEVVPDI
                     MCIGKGLSGGYMTLAAAITSQKVTETISRGEAGVFMHGPTFMANPLACAVACASVKLL
                     LSQDWQANIRRIESILKGRLKAAWDIRGVKDVRVLGAIGVIELDKGVDMARFQADCVA
                     QGIWVRPFGRLVYLMPPYIISDGVLTKLADKTVQILKEHSK"
     gene            1834..2481
                     /gene="bioD"
                     /locus_tag="WIX18_001182"
     CDS             1834..2481
                     /gene="bioD"
                     /locus_tag="WIX18_001182"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HEZ5238293.1"
                     /translation="MKGVYFVSGIDTDIGKTVATGMLAKQLLQQGKSVITQKPVQTGC
                     QDIAEDIAVHRKIMGIPMQEADKQGLTMPEIFSYPASPHLAARLDGRALDLDKIRTAT
                     QQLAAQYEIVLVEGAGGLMVPLTENLLTIDYIRQQGYPVILVTSGRLGSINHTLLSFA
                     ALKQYGIRLHSLIFNHIHDSSDECVAQDSLSYLKCRLKADFSEAEWMELAKTDAV"
     gene            2496..2972
                     /locus_tag="WIX18_001183"
     CDS             2496..2972
                     /locus_tag="WIX18_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HEZ5238294.1"
                     /translation="MEHLFGKWLPDLPTPISDGISLPMVRLLHTRSLTAALRALPHTF
                     SVELLKLGELETECGGRLVREVLLKLDGIPVVAARSECRIGSAFWQNILDCGTRPLGE
                     RLFQADLEGARSAFEFAVFGEGCGRYFAARRSRFSHHGEEMLLTEYFLPELKRFIG"
     gene            3002..3892
                     /gene="ubiA"
                     /locus_tag="WIX18_001184"
     CDS             3002..3892
                     /gene="ubiA"
                     /locus_tag="WIX18_001184"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HEZ5238295.1"
                     /translation="MNPKSPLFLRLSDRLDVYIRLMRADKPIGTLLLLWPTYWALWLA
                     SDGIPDLAVLAAFTIGTFLMRSAGCVINDFADRDFDGAVERTKNRPFAQGRVKKKEAL
                     LLTAFLCLLAALCLIPLNHLTWLMSLPALFLALTYPFTKRFFPIPQLYLGLAFSFGIP
                     MAFAAVAGNVPPQAWILFAANVLWTLAYDTVYAMADKEDDLKIGIKTSAVTFGRYDIA
                     AVMLCHGGFTLLMAVLGAVIGAAWAYWTAIPIVLLLQYRQYAAIKSRVRQICFETFLA
                     NNRIGWVWFTAIFAHTFFAK"
     gene            4077..4526
                     /gene="ptsN"
                     /locus_tag="WIX18_001185"
     CDS             4077..4526
                     /gene="ptsN"
                     /locus_tag="WIX18_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HEZ5238296.1"
                     /translation="MSLIGEILPLSHIVLDMEVGSKKRLFEEAGLLLERESSLSHADV
                     FECLFAREKLGSTGLGQGVAIPHGRHAGVKQATGAFIRTREPVGFDAPDGKPVSLVFI
                     LLVPENATGEHLEVLSKLAGKFSQKSIRESLMTVSSAEEARAILTEE"
     gene            4530..5492
                     /locus_tag="WIX18_001186"
     CDS             4530..5492
                     /locus_tag="WIX18_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr kinase/phosphorylase"
                     /protein_id="HEZ5238297.1"
                     /translation="MPSISVRRLFDDNQYKLQLAWAAGNSGADNRIGVEADKPVLALV
                     GHLNFIHPNQIQVVGLAESEYLNRLESGETGYQFGDLFDISMSLVIVANGLPVSPGLR
                     DYCHKNDIPLLTSKLESPYLMDVLRIYLQRTLAASSVKHGVFLDVFEIGVLITGHSGL
                     GKSELALELISRGHSLIADDAVELFRIGPETLEGRCSPMLRDFLEVRGLGILNIRHIF
                     GETSIRPKKILQLIINLVEADDEYMKQLDRLSIRTETESILNVNVRSVTLPVAVGRNL
                     AVLVEAAVRNYILQLRGKDSTREFLERHQTQLKENEQNHENRPD"
     gene            5473..6327
                     /gene="rapZ"
                     /locus_tag="WIX18_001187"
     CDS             5473..6327
                     /gene="rapZ"
                     /locus_tag="WIX18_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HEZ5238298.1"
                     /translation="MKIVLISGLSGSGKSVALRQMEDSGYFCVDNLPLEMLPALVSYH
                     IERADETELAVSVDVRSGIDIGQAREQIAYLRGLGHRVEVLFVEAEESVLVRRFSETR
                     RGHPLSNQDMTLLESLKKEREWLFPLKEIAYCIDTSKMNAQQLRHAVRQWLKVERTGL
                     LVILESFGFKYGVPNNADFMFDMRSLPNPYYDPELRPYTGMDKPVWDYLDGQPLVQEM
                     VDDIERFVTHWLPRLEDESRSYVTVAIGCTGGQHRSVYIVEKLARRLKGRYELLIRHR
                     QAQNLPSR"
     gene            6409..7350
                     /gene="ylqF"
                     /locus_tag="WIX18_001188"
     CDS             6409..7350
                     /gene="ylqF"
                     /locus_tag="WIX18_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="HEZ5238299.1"
                     /translation="MAIQWFPGHMNKAKKAIAERAKSVDMVIEMLDARMPASSENPLL
                     AQLSKGKPKLKILNKQDLADPERTKVWLDHYNSRPDTRAIALDSSETGAHGKITQACR
                     AMIPHRQGIDKPLRVLICGIPNVGKSTLINGMIGKKSAKTGNEPGITKAEQRLFLADD
                     FWLYDTPGMLWPKIIVEESGYNLAAGGSVGRNALDEEEVALELLDYLRRHYLPMLQER
                     YQADKDPSSHWDENVWLEWIAKKRGAVLSGGRINYQKAAENILTDFREGKIGRITLET
                     PNQWETWLKKARQKEAELKAIREARKAERKGQKPADE"
     gene            complement(7441..7561)
                     /locus_tag="WIX18_001189"
                     /pseudo
     CDS             complement(7441..7561)
                     /locus_tag="WIX18_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            7625..8227
                     /locus_tag="WIX18_001190"
     CDS             7625..8227
                     /locus_tag="WIX18_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HEZ5238300.1"
                     /translation="MTEKLPPDALIEAALLTQAEPLNEKTMRELCVPPLSQDKLIDVL
                     AQLKTRWQDRALQLVHTQEGWRFQIVQTAFERLGSLQEQRAPRYSRAVMETLAIIAYQ
                     QPVTRGDIEGIRGVAVSQNVMQTLQDRGWIEVIGHRDTLGKPALWATTATFLSDLRLD
                     GLEELPPLTELGELVLPDLMEMPPTDEEEPEAVPSDTLPN"
     gene            8411..10084
                     /gene="recN"
                     /locus_tag="WIX18_001191"
     CDS             8411..10084
                     /gene="recN"
                     /locus_tag="WIX18_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HEZ5238301.1"
                     /translation="MLLTLSLRDFVIVENLNLDFQSGFTVLTGETGAGKSITLDAIGL
                     LLGDKADYSQVRSGAKEAQLSALFDISHLPVLKAELYEQGLLNDGEEELSIRRIIDAK
                     GKSRSFINNQAATLAQLKSVGSQLIDIHGQNAHHSLNQEAAQRELLDAFAGSREQAET
                     VRQLYQNWANAKKALQEAQEHADAVIIERERLEWQFNELNQLDIKQGEWEALSQSHDS
                     LAHSAELLQAAEEVGSKIDGDNGIQRHIYQCQKLLANLQNIEPRFAESLNMLASIEAE
                     LGEISANMRDVAGRSDINPNELAAQEQRMGELMGMARKYRIEPEELPAKLAEIEERLQ
                     SLQAAADLDALEHNVAHNFAEYQEAAHILSAMRHQAAERLSGETTEHMQHLAMKGARF
                     DIVLLPSSPTAHGLEQVQFQVAANKGNPPRPLNKVASGGELARISLALQVVASQYTQV
                     PTLIFDEVDTGIGGGVAEMVGKALRSLGRKHQVLAVTHLPQVASCGENHWRVRKHSEG
                     EQTVSEISILDKIQRVEEVARMLGGEVITDTTRQHAAELLQLASKNSLF"
BASE COUNT         2478 a         2536 c         2781 g         2396 t
ORIGIN      
        1 gccttgtcct gatttttgtt aatccactat aaaatagggc tgtaaccttc aatcggaatt
       61 tgttgcctgc gggatatgcg gtatgaatgt ttgggatata tggggcagga tggtggaaat
      121 ctatcataag tataagaagc cgtgcctggt tttggcggtg gattttgtga tgggtatggt
      181 attcatagag ccgaatgagg agccgtgcat cggcagatgc tatgcgccta tgtcggagtc
      241 ccctgatttt gccaacgctg ttgcgatggc tgttgctatg atctgtatcg tatggattgc
      301 cgttttgtct atgactgatt gaagcgttgg gcggaggctg cgtgaaacgg tattgggcgt
      361 tgggccgtct gattccaatc gggcttgagg aatgcgaaac ggtgtgcgct tatgttgcgg
      421 aacgatttgt ttcgcggttt tgcgcccgaa acggatggag aggtgtggga aacggtctgt
      481 cggagtagaa tacgcgtttg cgtttgaatg cagcaataag aaaagagaga aacttatgcc
      541 gtctgaacat caacacacat catcattact tgatttcgac cgtacccatc tgctccatcc
      601 ctatacttcc atgaccgatc cgcttcccgt ttatcctgtc aaacgtgcag aaggggtgtt
      661 tatcgaattg gcggacggca cgcggctggt tgacgggatg tcgtcctggt ggtgtgcgat
      721 acacggttac aatcatcctg ttttgaatca ggcggttgag acgcagatta aacaaatgtc
      781 gcatgtgatg ttcggcggtt tgacgcatga gcctgcggtg gagctgggta aattgttggt
      841 tgggattttg ccgcaggggt tggaccgtat tttttatgcg gattcaggtt cggtttcggt
      901 ggaagttgcg ttgaaaatgg cggtgcaata ccggcaggtg cgggggttga cggcgaagca
      961 gaatattgcg acggtgcggc gcgggtatca cggcgatact tggaacgcga tgtccgtctg
     1021 cgatccggaa acggggatgc accatatttt cggcagcgcg ttgccgcagc gttattttgt
     1081 cgataacccg acaagccgtt tcgacgatga atgggacgag gcggatttgc agcctgtccg
     1141 cgccttgttt gaagtgcatc atgcggatat tgccgccttt attttagagc cggtcgtgca
     1201 gggcgcgggc ggcatgtatt tttatcatcc gcagtatctt cgcggattgc gcgatttgtg
     1261 cgacgagttt gatatcgttt tgatttttga tgaaatcgcc accggattcg ggcgcacggg
     1321 caagatgttt gcctgcgaac acgcggaggt cgtgccggat attatgtgca tcggcaaggg
     1381 tttgagcggc ggctatatga cgctggcggc agcaatcact tcgcaaaaag ttaccgaaac
     1441 gatttcgcgc ggcgaagcgg gcgtgtttat gcacggcccg acgtttatgg caaacccgct
     1501 ggcgtgtgcc gttgcctgcg cttcggtcaa actgcttttg tctcaagact ggcaggcaaa
     1561 tatccgccgc attgaaagca tcttaaaagg ccgtctgaaa gccgcgtggg acattcgcgg
     1621 cgtgaaagac gtacgcgttt tgggtgccat cggcgtgatc gagctggata aaggcgtgga
     1681 tatggcgcgt tttcaagcag attgcgtggc gcagggcatt tgggtgcgcc cgttcggcag
     1741 gctggtatat ctgatgccgc cgtatattat ttcagacggc gttttgacca aacttgccga
     1801 caaaaccgtg caaatcttga aggaacacag caaatgaaag gcgtttactt cgtcagcggc
     1861 atagacacgg acatcggcaa aactgtcgcc accggtatgt tggcaaaaca attgttgcag
     1921 cagggcaaaa gcgtgatcac gcaaaagccc gtgcaaaccg gttgccaaga catcgccgaa
     1981 gacatcgccg ttcaccgcaa aatcatgggc atcccgatgc aggaagcgga caaacaaggg
     2041 ctgaccatgc ctgaaatctt cagttatcca gcttcgcctc atctcgctgc ccgtcttgac
     2101 ggcagggctt tggacttgga caaaatccgc accgccacgc agcaactggc ggcgcaatac
     2161 gaaatcgtct tggtcgaagg cgcgggcgga ttgatggttc cgctgacgga aaacctgtta
     2221 accattgatt atatccgtca gcaaggctat cccgtcatcc tcgttaccag cggacggctt
     2281 ggcagtatca accacacttt actcagtttc gccgcgctca aacaatacgg catccgcctg
     2341 cacagcctga ttttcaacca tattcacgac agttccgacg aatgtgtcgc ccaagacagc
     2401 ctgagctact tgaaatgccg tctgaaagcc gatttttccg aagcggaatg gatggagttg
     2461 gcaaaaacag acgcggtata aagattggga aaaatatgga acacctattt gggaaatggc
     2521 tgcccgactt gcccaccccc atttcagacg gcatcagcct gccgatggtg cggctgctgc
     2581 acacccggtc gctgaccgcc gcattgcgcg ccttgccgca tacattttcg gtggaactgc
     2641 tgaaactggg cgaattggag acggaatgcg gagggaggct ggtgcgcgaa gttttgttga
     2701 agctggacgg tatccctgtt gtcgcggcaa ggagcgagtg ccggataggt tcggcgtttt
     2761 ggcaaaacat tttggactgc ggcacgcgtc ctttgggcga acgtctgttt caagccgatt
     2821 tggaaggggc gcgttcggcg tttgagtttg ccgttttcgg cgaaggatgc ggacggtact
     2881 ttgccgctcg gcgttcgcgg ttttcccatc acggcgagga aatgctgctg accgagtatt
     2941 ttctgcccga actgaaacgc tttatcggat aaaataccgt tttttcaagc tgcgcggcaa
     3001 tatgaatcct aaatcccctt tatttttacg cctgtccgat cgtttggacg tttatatcag
     3061 actgatgcgg gcggacaagc ccattgggac gctgcttttg ctgtggccga cctactgggc
     3121 gttgtggctg gcttcagacg gtattcccga tttggcggta ttggcggcgt ttacaatcgg
     3181 cacgttttta atgcgcagtg ccggctgcgt catcaacgat tttgccgacc gcgattttga
     3241 cggggctgtc gagcgcacta aaaaccgtcc gttcgcacag ggcagggtca agaaaaaaga
     3301 agcgctgctg ctgacggcat ttttgtgcct gcttgccgca ttgtgcctga ttccgctgaa
     3361 tcatctgaca tggctgatga gcctgcccgc gctgtttctt gcgctgactt acccgtttac
     3421 caaacgcttt tttccgattc cccaactcta tctcgggctt gccttttcct tcggtatccc
     3481 gatggcgttt gccgccgttg ccggaaacgt gccgcctcaa gcgtggatac tctttgccgc
     3541 caatgtgtta tggactctgg cgtatgacac ggtttatgca atggcggaca aagaagacga
     3601 tttgaaaatc ggcatcaaaa cctccgccgt cacgttcggg cgttacgaca tcgccgctgt
     3661 tatgctgtgt catggcggct ttaccctgct gatggcagta ttgggggcgg ttatcggtgc
     3721 ggcatgggca tattggacgg caatccccat cgtcctgctg ctgcaatacc gccaatatgc
     3781 cgccatcaaa agccgcgtcc ggcaaatctg ttttgaaacg tttttggcaa acaacagaat
     3841 tggttgggtg tggtttaccg ccatttttgc ccatacgttt ttcgcgaaat aaggcagggc
     3901 aatgccgtct gaagagccgt aaactgcttt ggacggcatt tctatctgtg ccgaaaagcg
     3961 ttaaaatatg tttttaaaac gctgtgttat gtcagcccgt accgtatgcg ggattgagat
     4021 ttgccccggc agtcggtaca atctttctgt tttgcgatgt ctgaaaagag aagcttatga
     4081 gccttatcgg cgaaattttg cctttgtccc atattgtttt ggatatggag gtgggcagta
     4141 aaaaaaggct gtttgaggaa gcaggcctgc ttttggaacg cgaatcctca ttgtcccatg
     4201 ctgatgtttt cgaatgtctt tttgcccgtg aaaaactcgg ttcgaccggt ttggggcagg
     4261 gcgttgccat cccgcacggc cgtcatgccg gcgtgaagca ggcgacgggc gcgttcatcc
     4321 gcacgcgcga acccgtcgga tttgacgcac cggacggcaa accggtttcc ctggttttta
     4381 tcttgctggt tcctgagaat gcaacgggcg agcatttgga ggtattgtcc aaactggccg
     4441 gcaagttttc ccaaaaaagc atccgcgaat cgctgatgac ggtttcttct gcggaagaag
     4501 cccgcgccat cctgaccgaa gaataaaata tgcccagtat ctctgtccgc cgactgtttg
     4561 acgacaacca atacaagttg caacttgcct gggccgccgg caattcgggt gcggacaacc
     4621 gtatcggcgt agaggcggac aagcccgtcc tcgctttggt cggacacctg aatttcatcc
     4681 accccaacca aatccaagtg gtcggtttgg cggagtcgga atatctgaac cgtctcgaat
     4741 cgggggaaac gggttatcag ttcggcgacc tgttcgacat ttctatgtct ttggttattg
     4801 tggcaaacgg cttgccggtt tccccgggac tgcgcgacta ctgccataaa aacgatattc
     4861 cactgctgac ttccaaactc gaaagcccct atctgatgga cgtgttgcgg atttacctgc
     4921 aacgcaccct ggcggcatcg tccgtcaaac acggcgtatt tctcgatgtg tttgaaatcg
     4981 gcgtgctgat taccggacat tcgggtttgg gtaagagcga attggcgttg gagctgattt
     5041 cgcgcggcca cagcctgatt gccgacgatg cggtcgagct gttccgcatc ggcccggaaa
     5101 cgctggaagg gcggtgttcg cctatgctgc gcgatttttt ggaagtgcgc ggcttgggga
     5161 tactcaatat ccgccatatt ttcggcgaaa cttccatccg ccccaaaaaa atcctgcaac
     5221 tcattatcaa tttggtcgag gcagacgacg agtatatgaa gcagctcgac cggttgagta
     5281 tccgcaccga aaccgaatcc atcctcaacg tcaacgtccg ttcggtaacg ctgcctgtcg
     5341 cggtcggacg caaccttgcc gtattggttg aagcggcggt acgcaattac attttgcagt
     5401 tgcgcggtaa ggacagtacg cgcgaatttt tggaacgcca tcagacgcaa cttaaagaaa
     5461 acgaacagaa tcatgaaaat cgtcctgatt agcgggttgt ccggttcggg caaatccgtc
     5521 gcactgcgcc aaatggaaga ttcgggttat ttctgcgtgg acaatttgcc tttggaaatg
     5581 ttgcccgcgc tggtgtcgta tcatatcgag cgtgcggacg aaaccgaatt ggcggtcagc
     5641 gtcgatgtgc gttccggcat tgacatcgga caggcgcggg aacagattgc ctatctgcgc
     5701 ggactggggc acagggttga agttttgttt gtcgaggcgg aagaaagcgt gttggtccgc
     5761 cggttttccg agaccaggcg aggacatcct ctgagcaatc aggatatgac cctgttggaa
     5821 agcttaaaga aagaacggga atggctgttt ccgcttaagg aaatcgccta ctgtatcgac
     5881 acttccaaga tgaatgccca acagctccgc catgcagtcc ggcagtggct gaaggtcgaa
     5941 cgtaccgggc tgctggtaat tttggagtcc ttcgggttca aatacggtgt gccgaacaac
     6001 gcggatttta tgttcgatat gcgcagtctg cccaacccgt attacgatcc cgagttgagg
     6061 ccttacaccg gtatggacaa gcccgtttgg gattatttgg acggacagcc gcttgtgcag
     6121 gaaatggttg acgacatcga aaggtttgtt acgcattggt taccgcgttt ggaggatgaa
     6181 agcaggagct acgttaccgt cgccatcggt tgcacgggag gacagcaccg ttcggtctat
     6241 attgtcgaaa aactcgcccg aaggttgaaa gggcgttatg aattgctgat acggcacaga
     6301 caggcgcaaa acctgccgag ccgttaatcc cattaaacaa ttatgccgtc tgaaaccccg
     6361 cttttctgtt tcagacggca tttcaaatat tgagaagaaa ggaaagatat ggcaatccaa
     6421 tggtttcccg gtcatatgaa caaggcgaaa aaagccatcg ccgagcgtgc aaaaagcgtt
     6481 gatatggtga ttgaaatgct ggacgcgcgt atgcccgcct ccagcgaaaa ccccctgctt
     6541 gcccagcttt ccaaaggcaa acccaaactt aaaatcctaa acaaacaaga tcttgccgac
     6601 cccgaacgca caaaggtctg gcttgaccac tacaacagcc gccccgacac gcgcgccatt
     6661 gccctcgatt cctccgaaac cggcgcacac ggcaaaatca cccaagcctg ccgcgcgatg
     6721 attccccacc ggcaaggcat agacaaaccc ttgcgcgtct tgatttgcgg cattcccaac
     6781 gtcggcaaat ccaccctcat caacggcatg ataggcaaaa aatccgccaa aaccggcaac
     6841 gaacccggca tcaccaaagc cgaacaacgc cttttccttg ccgacgactt ctggctgtac
     6901 gacacccccg gaatgctgtg gccgaaaatc attgtcgaag aaagcggcta caacctcgcc
     6961 gccggcggtt cagtcggacg caacgcattg gacgaagaag aagtcgccct cgaactttta
     7021 gactacctcc gccgccacta cctccctatg ttgcaagaac gctaccaagc cgacaaagac
     7081 cccagcagcc actgggacga aaacgtttgg ctcgaatgga tagccaaaaa acgcggcgca
     7141 gtcctcagcg gcggacggat caactaccaa aaagccgccg aaaacatcct taccgacttc
     7201 cgtgaaggca aaatcggcag aatcaccctc gaaacgccga accaatggga aacttggctc
     7261 aaaaaagccc gtcagaaaga agccgaactc aaagccatac gcgaagccag aaaagcagag
     7321 cgtaaagggc agaagcctgc ggacgagtag ggcggtatag tggaatgcca aaagaggttt
     7381 cactatcttc aaacaggtcg tctgaaacct cagaataaat ttttcagacg acctgtttgt
     7441 aaaatttaaa accaacatat atagtggatt aactttaaac cagtacggcg ttgccttgcc
     7501 gtactatctg tactgtctgc ggcttcgtcg ccttgtcctg atttaaagtt aatccactat
     7561 aaaactgaaa gaacccttat ccaaggctgt ctgaaaaata tttaaactat taaatccgga
     7621 tgttatgact gaaaaactcc ctcctgatgc gctgattgaa gccgcgcttt tgactcaagc
     7681 cgaaccttta aacgaaaaga ccatgcgcga attgtgtgtg ccgccgttgt cgcaagacaa
     7741 actgattgat gtgttggcgc agttgaaaac gcgttggcag gatagggcgt tgcaactggt
     7801 gcatacgcaa gagggctggc gttttcagat tgttcagacg gcattcgagc ggctgggcag
     7861 cctgcaagaa cagcgtgcgc cgcgctactc ccgcgccgtg atggaaacac tggcgattat
     7921 cgcctaccag cagcccgtaa cgcgcggcga catcgagggc atacgcggcg tggcggtgtc
     7981 gcagaacgtg atgcagacct tgcaggatcg ggggtggatt gaagtcatcg gacatcggga
     8041 cacattggga aaacccgcat tgtgggcaac aacggcaacg tttctcagcg atttgcgctt
     8101 ggacggtctg gaagaacttc cgccgctgac cgaactgggc gaactggttt tacccgattt
     8161 aatggaaatg ccgcctacgg atgaagaaga gccggaagcc gtaccgtccg ataccctgcc
     8221 caactgaaat tccaaatgcc gtctgaaacg cacattgctt cagacggcat tgcaacaaat
     8281 aagcagataa aaacaagtac taagcaaaat taaggaaaac ttatttttaa tttaaaaaaa
     8341 tcttagttat aattcgtata tctaaagttg atattgcttt tgtcggtaga attgctaagg
     8401 aatcctcaca atgcttctaa cactttcttt gcgtgatttt gtcattgttg aaaatctgaa
     8461 tctggatttt caaagcggct ttaccgtatt gaccggagaa accggcgcgg gcaagtccat
     8521 tactttggat gcgattggtc tgctgttggg cgacaaagcc gattacagcc aagtccgcag
     8581 cggtgcaaaa gaagcgcagt tgtcggcatt gttcgatatt tcccatttgc ctgttttaaa
     8641 agcagaattg tatgaacagg ggcttttaaa cgacggagaa gaagaactca gtatccgccg
     8701 cattatcgat gccaaaggca aaagccgcag ctttatcaac aatcaggccg ctaccttggc
     8761 gcaactcaaa tccgtcggta gccagcttat cgacatccac gggcaaaacg cccatcattc
     8821 gcttaatcag gaagccgccc agcgcgaatt gttggacgca tttgcgggta gcagggagca
     8881 ggcggaaacc gtcaggcagc tttatcaaaa ttgggccaat gcgaaaaaag ccctccaaga
     8941 ggcgcaggaa cacgccgatg ccgtcattat cgagcgggag cgtctggaat ggcagtttaa
     9001 cgaactgaat cagttggaca ttaaacaagg cgaatgggaa gccctcagcc aaagccacga
     9061 cagccttgcc cattctgccg agctgttgca ggctgccgaa gaagtcggaa gcaagattga
     9121 cggcgacaac ggcatccaac gccatatcta tcaatgtcaa aaactattgg ccaatctgca
     9181 aaacatcgag ccgcgctttg ccgagagcct gaatatgttg gcaagcatcg aagccgaatt
     9241 gggcgaaatc agtgccaata tgcgcgatgt ggcaggtcgc agcgacatca atcccaatga
     9301 attggcggca caggaacagc gcatgggcga actgatgggg atggcgcgga aataccggat
     9361 cgagcctgaa gagttgcctg ccaagttggc agaaatcgaa gaacgcctgc aaagcctgca
     9421 agctgccgcc gatttggacg cgctcgagca taatgttgcc cacaattttg ccgaatatca
     9481 ggaagctgcc cacatccttt ctgccatgcg ccatcaggcg gcagagcgtt tgagcggcga
     9541 aacgaccgag catatgcaac accttgccat gaaaggtgca cgtttcgaca tcgtcctgtt
     9601 gccctcgtcg ccgacggcac atggtttgga gcaggttcaa tttcaagttg ccgccaacaa
     9661 aggcaatccg ccccgtccgc tgaataaagt tgcctccggc ggcgaattgg cgcgtatcag
     9721 ccttgcctta caggttgttg ccagccaata tacccaagtt cccaccctga tttttgatga
     9781 ggtcgatacc ggtattggag ggggagtggc tgaaatggtc ggcaaggcat tacgttcgtt
     9841 gggcagaaaa catcaggtgc ttgccgttac ccatcttccg caagtcgcat cctgcggcga
     9901 aaaccactgg cgggtgcgca agcacagcga gggagagcaa accgtcagcg aaatcagtat
     9961 attggataaa atccaacggg tcgaagaggt tgcccgtatg ttgggcggag aagtcattac
    10021 cgatacgacg cggcaacatg cggcagaatt gctgcaactt gcgtcgaaaa atagtttatt
    10081 ttaaaatcaa tcagttaaaa aataactaaa aataaaagtc taaaacaata gacagaactc
    10141 agataaatcc gtattatcac gctttcttaa tcacttgaac aagtgattgt g
//
LOCUS       DAWITQ010000064        10026 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.064, whole genome shotgun sequence.
ACCESSION   DAWITQ010000064 DAWITQ010000000
VERSION     DAWITQ010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10026)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10026)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10026
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.064"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(105..1322)
                     /locus_tag="WIX18_001192"
     CDS             complement(105..1322)
                     /locus_tag="WIX18_001192"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEZ5238302.1"
                     /translation="MALIVHKYGGTSVGSPERIKNVAKRVAKARAEGHDIVVVVSAMS
                     GETNRLVALAHEMQEHPDPRELDVVLSTGEQVTIGLLAMALKDIGVDAKSYTGWQVAL
                     KTDTAHTKARIESIDDEKMRADLTAGKVVIVAGFQGISSEGDISTLGRGGSDTSAVAL
                     AAALKADECQIYTDVDGVYTTDPRVVPEARRMDTVTFEEMIELASLGSKVLQIRSVEF
                     AGKYKVRLRVLSSLQDGGNGTLITFEEDDNMERAAVTGIAFDKNQARINVRGVPDKPG
                     VAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGDYKQTLEILSERQDSIGAAS
                     IDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMISTSEIKVSVLIDEKYME
                     LATRVLHKAFNLG"
     gene            complement(1524..2252)
                     /gene="rph"
                     /locus_tag="WIX18_001193"
     CDS             complement(1524..2252)
                     /gene="rph"
                     /locus_tag="WIX18_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HEZ5238303.1"
                     /translation="MPDYIRISRAADSLRDIKITPHFLPHTDGSCLIECGNTKVICTA
                     SIDENVPPFLRGKNQGWVTAEYGMLPASTASRMRREASAGKQSGRTQEIQRLIGRSLR
                     AVVDMEKLGERQILIDCDVIQADGGTRTASITGAFVALQIAVGKLVSDGILSENPIRE
                     AVAAVSVGVVNGVPLLDLDYPEDSGCDSDVNIVMTASGKIIEIQGTAEDAPFSLDELG
                     KLVALAQKGIGELLQHQQNALSAA"
     gene            complement(2334..2798)
                     /locus_tag="WIX18_001194"
     CDS             complement(2334..2798)
                     /locus_tag="WIX18_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEZ5238304.1"
                     /translation="MYKHLVVAVDGSETSINALKHAAELAGVNGARLTLVHVANPAEY
                     MALAPEFLQHESYEAAAVAQGNEVLDAAERTARELGVENTVKHLLVANKGAREMAQDL
                     VDYADENGADLLVLGTHGRTGLMHLLMGSFAETVMRQSHLPLLIIRSKAEEA"
     gene            3015..3791
                     /locus_tag="WIX18_001195"
     CDS             3015..3791
                     /locus_tag="WIX18_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine dehydratase"
                     /protein_id="HEZ5238305.1"
                     /translation="MSDNALTSSRRFGGIARLYGDSALAHFSQAHVCVVGVGGVGSWA
                     VEALARTGIGRLTLIDLDNVAESNVNRQLHALTGDFGKAKVTALRERVAQINPECQVF
                     EIEDFVTEDNLPEYFGKGFDFVIDAIDQVRVKAAMAAYFVERKQPFVLSGGAGGQKNP
                     ALIQTADLSRVTHDPLLANLRYTLRKRYGFSRDTKANMRVPCVYSTENIVPPQSREAC
                     SADAAPQGLSCAGYGASMLVTASFGLYCAQAAVEHIADKK"
     gene            4036..4890
                     /locus_tag="WIX18_001196"
     CDS             4036..4890
                     /locus_tag="WIX18_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HEZ5238306.1"
                     /translation="MPPIPAPSAPSEHTVAWVFGQPVTDLPQDLFIPPDALKVVLGSF
                     QGPLDLLLYLIRKQNIDVLDIPMVKITEQYLHYIAQIEAYQFDLAAEYLLMAAMLIEI
                     KSRLLLPRTETVEDEEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAYLPLE
                     IAVEAKLPEVYITDLTQAWLGILSRAKHTRSHEVIKETISVRAQMTAILRRLNGHGIC
                     RFHDLFNPEQGAAYVVVNFIALLELAKEGLVGIVQEVGFGEIRISLNHEGAHSDGISG
                     TRGGRDVF"
     gene            4931..6139
                     /gene="pncB"
                     /locus_tag="WIX18_001197"
     CDS             4931..6139
                     /gene="pncB"
                     /locus_tag="WIX18_001197"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HEZ5238307.1"
                     /translation="MTGIIHSLLDTDLYKFTMLQVVLHQFPQTHSLYEFRCRNASTVY
                     PLADIREDLEAELDALCQLRFTHDELDYLRSLRFIKSDFVDYLELFQLQRRFVEIGTD
                     DKDRLNIRIEGPMIQAMFFEIFILAIVNELYFRRLETPAVIEEGERRLQAKAARLKEI
                     AAAQNPDEPPFLISDFGTRRRYKLAWQEHVIRTLLEAAPSIVRGTSNVFLAKKLGITP
                     IGTMAHEFLQAFQALDVRLRNFQKAALESWVHEYRGDLGVALTDVVGMDAFLRDFDLY
                     FAKLFDGLRHDSGDPYVWGDKAYAHYQKLKIDSRTKMLTFSDGLDIERSWALHQYFKD
                     RFKTGFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLSDSPGKTMTNNSTFLAYLRQ
                     VFDVPEPETP"
     gene            6231..7949
                     /gene="argS"
                     /locus_tag="WIX18_001198"
     CDS             6231..7949
                     /gene="argS"
                     /locus_tag="WIX18_001198"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEZ5238308.1"
                     /translation="MNLHQTVEHEAAAAFAAAGIAGSPVVLQPTKNAEHGDFQINGVM
                     GAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINLRLRPEFLAQNIQTALNDA
                     RFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVLAFMGNTVVRQNHVG
                     DWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDPAFADTAREYVVKLQG
                     GDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKYNDDLQPVVDDLVQKGL
                     AVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACLRYRVGTLHADRLLY
                     VVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKPFKTRSGDTVKLVDL
                     LTEAVERAAALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKNRTSNYVFDWDAMLS
                     FEGNTAPYLQYAYTRVQSVFRKAGEWDATAPTVLSEPLEKQLAAELLKFEDVLQSVAD
                     TAYPHYLAAYLYQIATLFSRFYEACPILKAESASRNSRLQLAKLTGDTLKQGLDLLGI
                     DVLDVM"
     gene            8507..9925
                     /locus_tag="WIX18_001199"
     CDS             8507..9925
                     /locus_tag="WIX18_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HEZ5238309.1"
                     /translation="MNIHTLLSKQWTLPPFLPKRLLLSLLILLAPNAMFWVLALLTAT
                     ARPIVNLDYLPAALLIALPWRFVKIAGVLAFWLAVLFDGLMMVIQLFPFMDLIGAINL
                     VPFILTAPAPYQIMTGLLLLYMLAMPFVLQKAAAKTDFRHIAACAAVVAAAGYFTGHL
                     SYYDRGRMANIFGANNFYYAKSQAMLYTVSQNADFITAGLVDPVFLPLGNQQRAATHL
                     NEPKSQKILFIVAESWGLPANPELQNATFAKLLAQKDRFSVWESGSFPFIGATVEGEM
                     RELCAYGGLRGFALRRAPDEKFARCLPNRLKQEGYATFAMHGAGSSLYDRFSWYPRAG
                     FQEIKTAENLIGKKTCAIFGGVCDSELFGEVSAFFKKHDKGLFYWMTLTSHADYPESD
                     IFNHRLKCTEYGLPAETDLCRNFSLHTQFFDQLADLIQRPEMKGTEVIIVGDHPPPVG
                     NLNETFRYLKQGHVAWLHFKIK"
BASE COUNT         2296 a         2966 c         2545 g         2219 t
ORIGIN      
        1 tttttgttcc aaagtcaaaa tatgccgtcc gaacattcgg gcggcagaca aaacggcact
       61 gcccgataaa ggcagtgccg ttgtccgttt caaaccgtga aacatcagcc caaattaaag
      121 gctttatgca ataccctggt tgccagttcc atgtattttt catcaatcaa tacggaaact
      181 ttgatttcgg aggtggaaat catttggatg ttgataccct cttcggcgag cgtgcggaag
      241 attttggcgg ctacaccgac gtgcgaacgc atacccaaac cgactgcgga gactttgcat
      301 acggtgtcgt cgccatcaat agaagccgcg ccgatactgt cttggcgttc cgacaggatt
      361 tccaaagtct gcttgtaatc gccgcgcggt acggtaaagg aaaaatcggt tgtgccttcg
      421 ctgccgacat tttggataat catatcgact tcaatgttgg catcggcaac cgcgcccaaa
      481 atctgatagg caacgccggg tttgtcgggt acgccgcgca cgttgatgcg ggcttggttt
      541 ttatcgaatg cgataccggt tacggcagct ctttccatgt tgtcgtcctc ttcaaaggta
      601 attaaggtgc cattgccgcc gtcttgcagg ctgctcagta cgcgcaggcg cactttgtac
      661 tttccggcga attctactga acggatttgc aagactttcg agccgaggct tgccaattcg
      721 atcatttctt caaatgtaac cgtatccatg cggcgcgctt cgggtacgac gcgcggatcg
      781 gtggtgtaca cgccgtccac gtcggtatag atttggcatt cgtccgcttt gagggctgcg
      841 gcaagcgcaa cggcggaagt gtcggaaccg ccgcgtccga gcgtggaaat atcgccttca
      901 ctgctgatgc cttggaagcc ggcaacgatg acgactttgc cggcggtaag gtcggcacgc
      961 attttttcgt catcaatgct ttcgatgcgg gctttggtgt gggcggtatc ggttttgagg
     1021 gcgacctgcc agcctgtgta gcttttggca tccacgccga tgtctttcaa tgccatcgcc
     1081 aaaaggccga tggttacttg ttcgccggtg gacaaaacca cgtccaattc gcgcggatcg
     1141 ggatgctcct gcatttcgtg cgccaacgcg accaggcggt tggtttcacc gctcatggcg
     1201 gatacgacga cgacgatgtc gtgtccttcg gcgcgggctt tggcgacacg tttggccacg
     1261 tttttaatgc gttcgggcga gcctacggat gtgccgccgt atttgtgtac gattaacgcc
     1321 atgtttcgtg ctttcttgtg tgggattggt cgggcagcat ggtttgctgg aaaagcggct
     1381 attattacta ttttttacat gaagttcaag aacggactgc gctttcccgc ctgccgtttg
     1441 acagcggtca gcgaaaaacc tgttctttca gattgttgac aaaatgccgt ctgaacggtt
     1501 ttcagacggc atccggacga caatcaggcg gcggacaacg cattttgctg gtgttgcagc
     1561 agttcgccta tgcctttttg cgccagtgca accagtttgc ccaattcgtc caaactgaac
     1621 ggcgcgtctt ccgccgtacc ttggatttcg atgatttttc ccgatgcggt catgacgata
     1681 ttcacatcac tgtcgcaacc ggagtcttcg ggataatcca aatccaaaag cggcacgccg
     1741 ttcactacgc ctactgacac agcggcaacg gcttcgcgga tggggttttc actcaaaatg
     1801 ccgtctgaaa ccagtttgcc gacggcgatt tgcagcgcga caaacgcacc ggtaatcgaa
     1861 gccgtacgcg taccgccgtc tgcctgaatc acgtcgcagt caatcaagat ttggcgttcg
     1921 ccgagttttt ccatatccac gaccgcgcgc agcgaacgcc cgataaggcg ttggatttct
     1981 tgtgtgcgcc cggactgttt gcccgccgaa gcttcgcggc gcatccggga agcagttgag
     2041 gcaggcagca tcccgtattc cgccgttacc cagccttggt ttttaccgcg cagaaacggc
     2101 gggacgtttt catctatgga agcggtacaa atcactttgg tattgccgca ttcaataagg
     2161 cacgaaccgt ccgtatgcgg caggaaatga ggggtgattt tgatatcgcg caggctgtcg
     2221 gcggcgcgcg agatgcggat gtaatcaggc atactgccct cccgttaaaa acagataaat
     2281 taaaaagcct taaatatgaa aaatcacatt taaggccttc aaactgaaaa tttctacgcc
     2341 tcttcggctt tgctgcggat aatcaaaagc ggcaggtggc tttggcgcat taccgtttcg
     2401 gcaaaactac ccattaaaag gtgcatcagt ccggtacgtc cgtgcgtacc caacaccagc
     2461 aggtcggcac cgttttcatc ggcataatca accaaatcct gcgccatttc acgcgcaccc
     2521 ttattggcaa ccagcaggtg tttgacggta ttttccacac ccagttcccg ggcggtgcgc
     2581 tcggcggcat ccaaaacttc gttgccttgc gcgacggcgg cggcttcgta gctttcgtgt
     2641 tgcaaaaatt cgggggcgag cgccatatat tcggcaggat tggcaacgtg taccaaagtc
     2701 agacgcgcac cgttgacccc ggcaagctcg gcggcatgtt tcagggcatt gatggacgtt
     2761 tcactgccgt caacggcaac aaccaaatgt ttgtacatat cgtattctcc ttttgcaccg
     2821 cctcgcggtg ccctcttgtc ggatgggcgc agggacagtt tgcgctgttt cattatagac
     2881 ccgccgtcgg gctttataca acagccgaac agcccgaccg ctttccagta taatatgccg
     2941 cttccgtgca gtcaggcatt ttttgccggc tttcgttcac tttttgattt gacgcaatct
     3001 tgcaggattc gaccatgtcc gacaacgctt tgacctcttc gcgacgcttc ggcggcatcg
     3061 ccagactcta cggagactct gccttggcgc acttttcaca ggcacacgtc tgcgtagtcg
     3121 gcgtgggcgg tgtcggctcg tgggcggtcg aggctttggc gcggacgggc atcggacgtt
     3181 tgactttgat tgatttggac aacgttgccg aatcgaatgt caaccgccag ctgcacgccc
     3241 tgaccggaga cttcggcaaa gcaaaagtta ccgccttgcg cgaacgcgtc gcccaaatca
     3301 acccagaatg ccaagtgttt gaaattgaag atttcgttac cgaagacaat ttgccggaat
     3361 acttcggaaa aggttttgat ttcgtcatcg acgcgatcga ccaagtgcgc gtcaaagcag
     3421 caatggcggc ttattttgtg gaacgcaaac aaccgtttgt cctcagcggc ggcgcgggcg
     3481 gacaaaaaaa tccggcgtta atccaaaccg ccgatttgag ccgcgtaacc cacgacccgc
     3541 tgcttgccaa cctgcgctac accttgcgga aacgctacgg attcagccgc gatacgaaag
     3601 caaatatgcg cgtgccttgc gtgtattcga ccgaaaatat cgtgccgccg cagtctaggg
     3661 aggcttgttc ggcagatgcc gctccgcaag gcttgtcgtg cgccggctac ggtgcaagca
     3721 tgctcgttac cgcttcgttc gggctatatt gcgcacaggc ggcggtggaa cacatcgcag
     3781 acaaaaaata agcaatgccg tctgaaacag gattcagacg gcatttgaac aaacgcggca
     3841 atcaagctgt cggttcagaa aaaccaacat cggcacgcct aaaaccgtat tcacaacctg
     3901 ctccttttca aaacatttgc atttaaaagc cgttataatg ccgtctgaac atttgcccga
     3961 ccacattata cgtgaatgtc ggcagattgt tttcttttgt aaacttatat taaaatccac
     4021 ttaccgattc acgccatgcc gcccatccct gccccatccg caccatccga gcacactgtc
     4081 gcatgggtat tcggccaacc cgttaccgat ttgccgcagg atttgtttat cccacccgac
     4141 gcgctgaaag tcgtattggg cagttttcaa ggccctttgg atctactgct gtatctgatc
     4201 cgcaagcaga acatcgatgt tctcgatatt ccgatggtga agattaccga gcagtatctg
     4261 cactacatcg cccaaataga agcctatcag tttgatttgg cggcggaata cctgcttatg
     4321 gcggccatgc tgattgaaat caaatcgcgc ctgctgctgc cgcgtaccga aaccgtcgaa
     4381 gacgaagaag ccgacccgcg tgccgagttg gtgcgccgcc tgctggctta cgaacagatg
     4441 aagctggcgg cgcagggttt ggacgcgctg ccccgagccg gacgggattt cgcgtgggct
     4501 tacctgccgc tggaaattgc cgtcgaagcc aagctgcccg aagtctatat taccgacttg
     4561 acgcaagcgt ggctgggtat tttgtctcgg gcaaaacaca cgcgcagcca cgaagtaatc
     4621 aaagaaacca tctccgtgcg cgcgcaaatg acggcaatcc tgcgccgttt gaacggacac
     4681 gggatatgca ggtttcacga cctgttcaat cccgaacagg gcgcggctta cgtggtcgtc
     4741 aacttcatcg cactgttgga gcttgccaaa gaaggtttgg tcggaatcgt acaggaagtc
     4801 ggtttcggag aaatccgaat cagcctcaat catgaggggg cacattcaga cggcatttcc
     4861 ggcacacggg gcgggcgcga tgtgttctaa tacgccccaa gccgccacca aaaatcggga
     4921 gacacgccat atgaccggca tcatacattc gctgcttgac accgacctct acaaattcac
     4981 tatgctgcaa gtggttctgc accagtttcc gcagacgcac agcctttacg aattccgctg
     5041 ccgcaacgcc tcgaccgtct atccgcttgc cgacatcagg gaagacttgg aagccgaact
     5101 cgacgcgctc tgccaactac gcttcaccca cgacgaactc gactacctcc gtagcctgcg
     5161 tttcattaaa agcgactttg tcgattatct cgaactcttc cagctccaac gccgctttgt
     5221 cgaaatcggc acagacgata aagaccgtct gaacatccgc atcgaaggtc cgatgataca
     5281 ggcgatgttt tttgaaatct tcatcctcgc cattgtcaac gaactttact tccgccgcct
     5341 ggaaacccct gcagtcatag aagaaggcga acgccggctt caagccaaag ccgcgcgcct
     5401 caaagaaatc gccgccgcac aaaaccccga cgaaccgccc ttcctgattt ccgacttcgg
     5461 cacgcgccgc cgctacaagc tcgcgtggca ggaacacgtc atccgcaccc tgctcgaagc
     5521 cgccccaagc atcgtgcgcg gcaccagcaa tgtctttctc gccaaaaaac tcggcatcac
     5581 ccccatcggc accatggcgc acgagttcct ccaagccttc caggccctcg acgtacgcct
     5641 gcggaatttc caaaaggccg cgctcgaaag ctgggtgcac gaataccggg gcgatttggg
     5701 cgttgccctg accgacgtgg tcggtatgga tgccttcctg cgcgatttcg acctctattt
     5761 cgccaaactt ttcgacgggc tgcgccacga cagcggcgac ccttacgttt ggggcgacaa
     5821 agcctacgcc cactatcaaa agctcaaaat cgacagccgc accaaaatgc tgaccttctc
     5881 cgacgggctg gacatcgaac gctcttgggc attacaccaa tatttcaaag accgcttcaa
     5941 aaccggcttc ggcatcggca ccaacctgac caacgatatg gggcatacgc ctttgaatat
     6001 cgtcttgaaa ctggtcgaat gcaacgggca gtccgtcgcc aagctgtccg actctccggg
     6061 caaaaccatg accaacaaca gcaccttcct cgcctacctg cgccaagtgt tcgacgtacc
     6121 cgaacccgaa acgccgtaaa ccggcagaaa aagcgcacaa ttcctgtttc tgccgcataa
     6181 aatcttttaa aataccgcct gatttgaatt taaccgaaag accgaacttc atgaacctac
     6241 atcaaaccgt cgaacacgaa gccgccgccg cctttgccgc cgcaggcatc gccggcagcc
     6301 ccgttgtttt gcagccgacc aaaaatgccg aacacggcga tttccaaatc aacggcgtga
     6361 tgggtgcggc gaaaaaagcc aaacaaaacc cgcgcgaact ggcgcaaaag gtcgccgacg
     6421 cattggcagg caacgccgtc atcgaaagcg cggaagtcgc cggtcccggt tttatcaacc
     6481 tgcgcctgcg ccccgaattt ctcgcgcaaa acattcagac ggccttgaac gacgcgcgtt
     6541 tcggcatagc gaaaaccgac aaaccgcaaa ccgtcgtcat cgactattcc tcgcccaatc
     6601 tggcgaagga aatgcatgtc ggtcacctgc gttccagcat catcggcgac agcatttcgc
     6661 gcgtgttggc atttatgggc aacaccgtcg tccgtcaaaa ccacgtcggc gactggggta
     6721 cgcagttcgg catgttggtc gcttatttgg tcgagcagca aaaagacaat gccgcgtttg
     6781 agctggcgga tttggagcag ttttaccgcg ccgccaaagt gcgctttgac gaagatcctg
     6841 ccttcgccga caccgcgcgc gaatacgttg tgaagctgca aggcggcgat gaaaccgttt
     6901 tggcattgtg gaaacagttt gtcgatattt cgctctcgca cgcccaagcc gtttacgaca
     6961 cgctgggctt gaagctgcgc cccgaagacg tggcgggcga atcgaagtac aacgacgatt
     7021 tgcagccagt ggtcgatgat ttggttcaaa aaggtctggc ggtcgaagac gacggcgcga
     7081 aagtcgtatt cttggacgag ttcaaaaaca aagaaggcga acccgccgcg tttatcgtgc
     7141 aaaaacaagg cggcggcttc ctttatgctt ccaccgactt ggcgtgtttg cgctaccgtg
     7201 tcggcacgct tcatgccgac cgcctgctgt acgtcgtcga ccaccgccaa gccctgcact
     7261 ttgagcaact ctttaccact tcccgcaaag caggctatct gccggaaaac gtcggcgcgg
     7321 catttgtcgg cttcggcacg atgatgggca aagacggcaa accgttcaaa acacgcagcg
     7381 gcgacactgt aaaactggtc gatctgctga ccgaagccgt cgaacgcgcc gccgctttgg
     7441 tgaaagagaa aaatcccgaa ttgggcgcgg acgaagccgc caaaatcggc aaaaccgtcg
     7501 gcatcggcgc ggtcaaatac gccgacttga gcaaaaaccg caccagcaat tatgtgttcg
     7561 actgggacgc tatgctttcg tttgaaggca acaccgcccc ctacctgcaa tatgcctaca
     7621 cccgcgtgca aagcgtgttc cgcaaagccg gtgaatggga cgcaaccgca ccgactgttt
     7681 tgagcgaacc gctggaaaaa cagcttgccg ccgagctgct gaaattcgaa gacgtgctgc
     7741 aaagcgtggc ggacacggcg tatccgcact acctcgccgc ctacctctat caaattgcga
     7801 ccctgttcag ccgcttctac gaagcctgtc cgatactcaa agccgaaagc gcaagccgca
     7861 acagccgcct gcaactggcg aagctgaccg gcgacacgct gaaacaaggc ttggatttgc
     7921 tgggcatcga tgtgttggac gtaatgtaaa accgcaccgc ccgattgcgg acaacagcct
     7981 cgccatcctt atccgaatct gaaaaaagcg gcgcgataca ccgtatccgc cgcccctccc
     8041 aaaatgcgaa acaaacaaac gccaagcaag caagcaagca agcaagcaag caagcaagca
     8101 agcaagcaag caagcaaaaa attataaccc ccttcctgcc gacgcacgca ctttccgcgc
     8161 ggcgcattcc ccttttcccg cccctcaaat ccgccttttc ttcaggcagg gtttcagccc
     8221 gcctcttttc cctgttttcc tttccccgac acgcgtgcgc gccccctgcc gcactgtgct
     8281 gcactttcgc gcccggacgg catcgttccg ccatccggtt ctctgtttta aatacccctg
     8341 tttcagaaag aaatgcagat gtttcaacac acaggacgac acataaagca ccgccctatg
     8401 tgttgccctg atttggaagg ggttacgcct cccaaataaa gtctgatcct gccgccccga
     8461 aggacagatg tccgagtggc gaagtttcaa ccgaaaagga aatacgatga atattcacac
     8521 cctgctctcc aaacaatgga cgctgccgcc attcctgccg aaacggctgc tgctgtccct
     8581 gctgatactg ctggccccca atgcaatgtt ttgggttttg gcactgctga ccgccaccgc
     8641 ccgcccgatt gtcaatttgg actatcttcc cgccgcgctg ctgatcgccc tgccttggcg
     8701 tttcgtcaaa attgccggcg tattggcgtt ttggctggcg gttttgtttg acgggctgat
     8761 gatggtgatc cagctcttcc cttttatgga cctcatcggc gccatcaacc tcgtcccctt
     8821 catcctgacc gcccccgccc cttatcagat aatgaccggg ctgttgctgc tgtatatgct
     8881 ggcgatgccg tttgtgttgc agaaagccgc cgccaaaacc gacttccgac acattgccgc
     8941 ctgtgccgcc gttgtggcgg cagccggcta tttcactggc catttgagtt actacgaccg
     9001 ggggcggatg gccaatatct tcggcgcaaa caacttctac tacgccaaaa gtcaggcgat
     9061 gctctacacc gtcagccaga atgccgactt tattaccgcc ggcctggtcg atcccgtctt
     9121 cctccccttg ggcaatcaac agcgtgccgc cacgcatctg aacgagccga aatctcaaaa
     9181 aatcctcttt atcgtcgccg aatcttgggg gctgccggcc aatcccgaac ttcaaaacgc
     9241 cacttttgcc aaactgctgg cgcaaaaaga ccgtttttcg gtttgggaaa gcggcagttt
     9301 tccctttatc ggcgcgacgg tcgaaggcga aatgcgcgaa ctgtgtgcct acggcggttt
     9361 gcgcgggttc gcactgcgcc gcgcgcccga cgaaaaattt gcccgctgcc tccccaaccg
     9421 tttgaaacaa gaaggttacg ccacctttgc gatgcacggc gcgggcagtt cgctttacga
     9481 ccgcttcagc tggtatccga gggcgggctt tcaagaaatc aaaaccgccg aaaacctgat
     9541 cggtaaaaaa acctgcgcca ttttcggcgg cgtgtgcgac agcgagctgt tcggcgaagt
     9601 gtcggcattt ttcaaaaaac acgacaaggg actgttttac tggatgacgc tgaccagcca
     9661 cgccgactat cccgaatccg acattttcaa ccacaggctc aaatgcaccg aatacggcct
     9721 gcccgccgaa accgacctct gccgcaattt cagcctgcac acccaattct tcgaccaact
     9781 ggcggatttg atccaacgcc ccgaaatgaa aggcacggaa gtcatcatcg tcggcgacca
     9841 tccgccgccc gtcggcaacc tcaatgaaac cttccgctac ctcaaacagg ggcacgtcgc
     9901 ctggctgcac ttcaaaatca aataacaaca atgccgtctg aacgcaccaa cagccttcag
     9961 acggcatttt gcagacagac cgacccttca agcccacttt tttcatcatc tccgataaat
    10021 tgcttt
//
LOCUS       DAWITQ010000065         9795 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.065, whole genome shotgun sequence.
ACCESSION   DAWITQ010000065 DAWITQ010000000
VERSION     DAWITQ010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9795)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9795)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9795
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.065"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(9..1304)
                     /locus_tag="WIX18_001200"
     CDS             complement(9..1304)
                     /locus_tag="WIX18_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEZ5238310.1"
                     /translation="MIRPDFQEYLPSYYFSSVNPHTVYPKLQCRLKTDTCIIGGGLSG
                     LCTALPLAEQGHETVVLEAARIGFGASGRSGGQVISDYACGMGEIEKQVGLEQAQWFW
                     QQSLQAVELVDERVRKHAIDCDWQRGYATVAVRPQHWEELQQWHEHAQRHYGASHYQL
                     WDKAELKQQLDSDMYQGAQFDPLSGHLHPLNYTLGIARAAAEAGAQIFEQSPMTCIEP
                     HQNGWLVYTPEGSVECKNVVYAVNTYAGLNPIFKPLERKAIAVSTFIIATEPLGARAK
                     GLIRNNMAVCDNRHILDYYRLSADGRLLFGGKDNEFIDNPARMTELVRQDMLKVFPQL
                     ADVKIEYSWGGECDITANLVPHFGRLAPNVFYTQGYSGHGMAITGIAGLAVAEAILGD
                     ECRLKPFEQLRQPNIILQPFLRKLGSFLGSKYYQWKDSR"
     gene            complement(1430..2317)
                     /locus_tag="WIX18_001201"
     CDS             complement(1430..2317)
                     /locus_tag="WIX18_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEZ5238311.1"
                     /translation="MQKSKLSWFLKLMLALSLAFLYIPLVVLVIYSFNESKLVTVWGG
                     FSTKWYGALLENDTILEAAWLSLRIAVVSSLAAVVLGTLAGYAMARIKRFRGSTLFAG
                     MISAPMVMPDVITGLSMLLLIIQVQIFLQGSEWLQHLYFDRGFFTIFLGHTTLCMAYI
                     TVVIRSRLVELDQSLEEAAMDLGARPLKIFFVITLPLIAPAIASGFLLGITLSLDDLV
                     ITSFLSGPGSSTLPQVIFSKIKLGLDPQMNVLATILIGIIGTLVIIVNYWMMRQATRR
                     DREAAEAYRQEKLAAEKAH"
     gene            complement(2317..3282)
                     /locus_tag="WIX18_001202"
     CDS             complement(2317..3282)
                     /locus_tag="WIX18_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEZ5238312.1"
                     /translation="MNLNKLKNKLFRRPGQRVVIAVPYIWLLVLFLIPFAIVLKISFA
                     EQEIAIPPFTPLTSIDEDLGRLNITISYQNYADIFQNFWHTLNPFGDSENSNIYLMTY
                     WSSIKTALMTTVICLLVGYPTAYAISRANPSVRNGLLLAIMLPFWTSFLLRVYAWMGL
                     LGHNGIVNNLLIKMGIISEPLDLFYNAFSLNLVMVYAYLPFMILPLYTQLVKLDNRLL
                     EAASDLGAGPVKSFLTITLPLSKTGIIAGSMLVFVPAVGEFVIPELVGGSENLMIGKV
                     LWQAFFDQNNWPLASAVAVVMVALLVVPIALFQHYENRELEEGAK"
     gene            complement(3298..4422)
                     /gene="potA"
                     /locus_tag="WIX18_001203"
     CDS             complement(3298..4422)
                     /gene="potA"
                     /locus_tag="WIX18_001203"
                     /EC_number="7.6.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter ATP-binding protein"
                     /protein_id="HEZ5238313.1"
                     /translation="MTATTASSAKPYLKIQGLVKKFGDNYAVDNIDLDIYQHEIFALL
                     GSSGSGKSTLLRMLAGMESPNQGKIILDGQDITKLAPYDRPINMMFQSYALFPHMTVE
                     QNIAFGLKQDKMPKGEIAARVEEMLRLVQMTKFAKRKPHQLSGGQQQRIALARSLAKR
                     PKILLLDEPLGALDKKLRQQTQLELVNTLEQVGVTCIMVTHDQEEAMTMATRIAIMSD
                     GQLQQVGTPSDVYDYPNSRFTAEFIGETNIFDGVVIEDHADYAVIECEGLENHVRIDH
                     GLGGPSEQDLWVSIRPEDIDLYKEKPEYLGDYNWAKGTVKEIAYLGSFAIYHIKLANG
                     RVVKSQVPAPYWYVRNITPPTWDETVYISWPENQPTPLFR"
     gene            complement(4617..4724)
                     /locus_tag="WIX18_001204"
                     /pseudo
     CDS             complement(4617..4724)
                     /locus_tag="WIX18_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(4803..5072)
                     /gene="rpsO"
                     /locus_tag="WIX18_001205"
     CDS             complement(4803..5072)
                     /gene="rpsO"
                     /locus_tag="WIX18_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEZ5238314.1"
                     /translation="MALTVEQKAQIVKDFQRKEGDTGSSEVQVALLTFRINDLTPHFK
                     ANPKDHHSRRGLLKMVSQRRRLLAYLRRTQPDTYRALITRLGLRK"
     gene            complement(5295..6230)
                     /gene="secF"
                     /locus_tag="WIX18_001206"
     CDS             complement(5295..6230)
                     /gene="secF"
                     /locus_tag="WIX18_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HEZ5238315.1"
                     /translation="MELFKIKRDIPFMSYGKLTTFISLVTFIAAVFFLVTRGLNFSVE
                     FTGGTVMEVQYQQGADVNKMRERLDTLKIGDVQVQALGTNKHIMIRLPNKEGVTSAQL
                     SNQVMDLLKKDSPDVTLRQVEFIGPQVGEELVSNGLMALGFVVIGIIIYLSMRFEWRF
                     AVSAIIANMHDIVIILGCFAFFQWEFSLTVLAGILAVLGYSVNESVVVFDRIRENFRK
                     PAMRGHAVPEVIDNAITATMSRTIITHGSTEAMVVSMLVFGGAALHGFSMALTIGIVF
                     GIYSSVLVASPLLLMFGLSRDNIGKEPKKKEEIVV"
     gene            complement(6234..8087)
                     /gene="secD"
                     /locus_tag="WIX18_001207"
     CDS             complement(6234..8087)
                     /gene="secD"
                     /locus_tag="WIX18_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HEZ5238316.1"
                     /translation="MNRYPLWKYLLIVFTIAVAAVYSLPNLFGETPAVQVSTNRQAII
                     INEQTQFKVDAALKNAGIQTDGMFVVDNSLKVRFKDTETQLKARDVIENTLGEGYITA
                     LNLLADSPEWMAKIKANPMFLGLDLRGGVHFTMQVDMKAAMQKTFERYSGDIRRELRR
                     EKIRSGTVRQAGNSLTVPLQDAGDVQKALPQLRKLFPEATLNSDGSNIVLTLSEEAVN
                     KVRSDAVKQNITTLHNRVNELGVAEPVIQQSGADRIVVQLPGVQDTAKAKDIIGRTAT
                     LELRMVEDDPAKLREALEGNVPSGYELLSSGGDRPETLLISKQVELTGDNINDAQPSF
                     DQMGAPAVSLSLDSAGGSIFGELTAANVGKRMAMVLIDQGKSEVVTAPVIRTAITGGR
                     VEISGSMTAAEANDTSLLLRAGSLAAPMQIVEERTIGPSLGKENIEKGFHSTLWGFAI
                     VAAFMVVYYRLMGFFSTIALSANILFLIGILSAMQATLTLPGMAALALTLGMAIDSNV
                     LINERIREELRAGVPPQQAINLGFQHAWATIVDSNLTSLIAGIALLVFGSGPVRGFAV
                     VHCLGILTSMYSSVVVFRALVNLWYGRRRKLQNISIGSVWKPKAEIAGGKE"
     gene            complement(8299..8565)
                     /gene="yajC"
                     /locus_tag="WIX18_001208"
     CDS             complement(8299..8565)
                     /gene="yajC"
                     /locus_tag="WIX18_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEZ5238317.1"
                     /translation="MNQAVAQFAPLVLIMVVFYFLIMRPQQKKFKAHQAMLAALKVGD
                     KVVLAAGFKGKVTRVGEQFFTVDIGQGTKIEVEVERNAISAKVD"
     gene            8693..>9795
                     /locus_tag="WIX18_001209"
     CDS             8693..>9795
                     /locus_tag="WIX18_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HEZ5238318.1"
                     /translation="MSLTRLILKFYALLRLFLGKNARTAWISHPACTGHEPGANHPDS
                     PDRILCIEQALRRAGIWQHLQTIEAEEISDTRLALVHSSKYLNRLESCLPQKGKIFRL
                     DNDTAISTGSLSAAHFAAGSAVQAVDMVMNRKAWHAFCAARPPGHHAGSGKAGGFCLL
                     NNVAAGVMHAIAEYRLKRIAVIDFDVHYGDGTAEIFKDDPRILFFNLFETDLFPFPEN
                     NDMPDGGNMVHLPLPPGTGSRTFREAVRRQWLPRLAAFKPELVLLSAGFDAHRLDESG
                     RLNLHEADFAWLTHKIIQTASGCPGKIVSVLEGGYTLEPLAQSAAEHIRVLAGLGKSD
                     AATAYQKTLDPTKKRFAKPKTGQVRQPTQSDRY"
BASE COUNT         2515 a         2599 c         2422 g         2259 t
ORIGIN      
        1 tgcgacgctt aacggctgtc tttccactga taatatttcg agccgaggaa agaaccgagc
       61 tttctcaaaa acggttggag gatgatattc ggctggcgca actgctcaaa cggcttcaga
      121 cggcattcgt cccctaaaat tgcttcggca accgccagac ctgcaatgcc tgttatcgcc
      181 atcccgtgtc cggaataacc ttgcgtataa aaaacattcg gggccaaacg tccgaaatgc
      241 gggacaaggt tggcggtaat atcgcactcc ccgccccacg aatattcgat tttgacatcg
      301 gcaagctgcg gaaaaacttt aagcatatct tggcggacaa gctcggtcat acgcgcagga
      361 ttgtcgataa actcgttatc cttaccgccg aaaagcagtc tgccgtccgc gctgaggcgg
      421 taataatcca aaatatggcg gttgtcgcat acagccatat tgttgcggat aagccctttt
      481 gcgcgcgccc ccaagggttc ggtggcaata ataaaggtgc taacggcaat cgccttacgc
      541 tccaaaggct tgaatatcgg attcaaaccg gcataggtat tgacagcata gaccacattt
      601 ttgcactcga cgctgccttc gggcgtgtaa accagccaac cgttttgatg cggttcgatg
      661 cacgtcatcg gggattgctc gaaaatctgc gcaccggctt cggcagcggc acgagcgatg
      721 cccaaagtgt aattgagcgg atgcaggtgt ccggataagg ggtcgaattg tgccccttgg
      781 tacatatcgc tgtcaagctg ctgtttcaac tcggctttat cccaaagttg ataatgactc
      841 gcaccgtaat gccgttgggc gtgttcatgc cactgctgca actcttccca atgctgcgga
      901 cggacggcaa ccgtggcata accgcgctgc caatcgcaat caatggcatg tttgcggacg
      961 cgttcgtcca ccagttcgac cgcctgcaaa gactgttgcc aaaaccattg cgcctgctcc
     1021 aagccgacct gtttttcaat ttcccccata ccgcaggcgt aatcgctgat aacctgcccg
     1081 ccactccgtc ccgacgcgcc gaaaccgata cgcgcggctt ccaacacaac cgtttcatgt
     1141 ccctgctccg ccaagggcaa tgcagtgcac aaaccactca atccgccgcc gatgatacag
     1201 gtatcggttt tcagacggca ttgaagtttc ggataaacag tatgaggatt aaccgaacta
     1261 aaataataag aaggcagata ttcttgaaaa tcaggacgaa tcattatgtt tactttatca
     1321 ggtgtatttt cagacggcat gatatggttt gccgtaccat gccgtctgaa cgggaaatta
     1381 ctttaagaaa acaggctgac ctgataatgc ggtcagcctg ccctgtcggt caatgcgctt
     1441 tctcagcagc cagtttttcc tggcggtagg cttctgccgc ttctcggtca cgcctggtcg
     1501 cctgcctcat catccaataa ttgacgatga tgaccaatgt tccgatgatg ccgatcagga
     1561 tggttgccaa aacgttcatc tgcggatcaa gacccagctt gattttggag aaaatcacct
     1621 gcggcaatgt ggatgaaccg gggccggaga ggaatgaggt aattaccaaa tcatccaaag
     1681 acagggtaat gccgagcaga aagcctgaag cgatggcagg ggcaatcaaa ggcaaagtga
     1741 tgacaaaaaa gattttcagc ggacgcgcgc ccaaatccat tgcggcttct tcgagcgatt
     1801 ggtcaagctc aaccagacgc gaacggataa caacggtaat gtacgccata cacagcgtcg
     1861 tatgtccgag gaagatggtg aaaaagccac gatcgaagta gagatgttgt aaccattcgc
     1921 tgccctgcaa aaatatctgt acctgaataa tcagcagcag catagacaga ccggtaatca
     1981 cgtcgggcat caccataggt gcggaaatca taccggcgaa caaggtactg ccgcgaaaac
     2041 gtttaatccg cgccatcgca tagcctgcca gcgtgcccaa aacgacggca gcaagcgaag
     2101 acacaacggc aatccgcagc gacagccaag cggcttccaa gatggtgtcg ttttccagca
     2161 atgcgccgta ccacttggtc gaaaagccgc cccaaacggt taccagcttg gattcgttaa
     2221 acgaatagat gaccaaaaca accagcggga tatacagaaa cgccagcgac agtgccaaca
     2281 tcagtttcaa gaaccaagat aatttggatt tctgcattat ttggctcctt cttccaattc
     2341 gcggttttca taatgctgaa acagggcaat cggcacgacc agcagcgcga ccatcacgac
     2401 ggcgacggcg gaagccagcg gccagttgtt ttgatcgaag aacgcctgcc acaagacttt
     2461 accaatcatc aggttttccg aaccgccgac cagctcggga atgacgaact cgccgacagc
     2521 agggacgaaa accagcatgg agcctgcaat aatgccggtt ttcgacaaag gcagggtaat
     2581 cgtcaagaac gatttgaccg gccccgcgcc caaatcggaa gccgcttcaa gcaggcggtt
     2641 gtcgagtttc accagttgcg tgtatagcgg cagaatcata aacggcagat aggcgtaaac
     2701 catcaccaaa ttgagcgaaa aggcattgta gaacaaatcc aaaggctcgc tgataatacc
     2761 cattttaatc aacaggttgt ttacaatacc gttatgcccg agcagaccca tccacgcata
     2821 gacgcgcaac aggaacgatg tccaaaaggg cagcataatg gcaagcagca aaccattgcg
     2881 gacagaagga ttggcacgag aaatcgcata ggcggtcgga taaccgacca acaggcaaat
     2941 cactgtcgtc atcaatgcgg ttttgattga agaccagtag gtcatcagat agatattgct
     3001 gttttcactg tcgccgaacg ggttaagggt atgccaaaaa ttttggaaaa tatcggcata
     3061 gttttgataa ctgatggtga tattcagacg acctaaatct tcgtcgatgc tggtcagcgg
     3121 cgtaaacggc ggaatggcga tttcttgttc ggcaaagctg attttcagca cgatggcgaa
     3181 cggaatcaga aacagcacca aaagccaaat atacggtacg gcaatcacca cacgctgccc
     3241 cgggcggcgg aacagtttgt ttttcagttt attaaggttc attgcattcc ccttaaatca
     3301 acggaacagt ggcgtaggct ggttttccgg ccagctgata tacacggttt cgtcccaagt
     3361 tggcggtgta atgttgcgta cataccagta aggtgcagga acttggcttt tgacgacgcg
     3421 cccgttggcg agtttgatat ggtatatggc aaagctgccc aaataggcga tttcttttac
     3481 cgtgcctttc gcccagttgt agtcgcccaa atattcgggt ttttctttat ataaatcaat
     3541 atcctctggt cgaatactaa cccaaaggtc ctgctcgctc ggaccaccca aaccgtgatc
     3601 gatgcggacg tggttttcca aaccttcgca ttcgataacg gcatagtcgg catgatcttc
     3661 aatcaccaca ccgtcaaaga tgttggtttc gccgataaac tcggcagtga agcggctgtt
     3721 gggatagtcg tacacgtcgc tgggtgtgcc gacttgctgc aactgaccgt cagacataat
     3781 ggcgatgcgg gtcgccatcg tcatcgcctc ttcttggtcg tgcgtaacca taatacaggt
     3841 tacgccgact tgttccagcg tattgaccaa ctcaagctgg gtttgttggc gcagtttttt
     3901 gtccaatgca ccgaggggct catccagcag tagaattttc ggacgttttg ccagactgcg
     3961 tgccaaagca atgcgctgct gctgaccgcc ggacaattgg tgcggtttgc gtttagcaaa
     4021 tttggtcatc tgaaccaggc ggagcatttc ttcgacgcgc gcggcgattt cgcctttagg
     4081 cattttgtcc tgtttcagac cgaaggcaat gttttgttct acggtcatat gcggaaaaag
     4141 cgcgtaactt tggaacatca tattgatggg gcgatcatag ggtgcaagtt tggtaatatc
     4201 ctgaccatca aggataattt ttccctgatt gggactttcc atacccgcca gcatacgcag
     4261 cagtgtagat tttccgctgc cggaactgcc caaaagggcg aagatttcgt gttgataaat
     4321 gtccaagtcg atgttatcga cagcgtaatt gtcaccaaac tttttcacca aaccttggat
     4381 tttgagataa ggtttggctg aagacgcagt ggttgcggtc ataatggcaa tactccaata
     4441 aaaagacgag taccggcaaa acggattttc gaatgggtga taaaaagctg tttgattgct
     4501 ggcgggagtt aaacgtttga tgccgtctga aactcttgta aagcgcacgg gcagcatgaa
     4561 atggaacaag attccaaaga actttatatt atattagttt atgcggtttt cgggcaatat
     4621 agtggattaa atttaaacca gtacagcgtt gccttgcctt gccgtactat ttgtactgtc
     4681 tgcggcttcg tcgccttgtc ctgatttaaa tttaatccac tataaatatg gatttgagct
     4741 tgtcggaaag caacagaaaa gaaaacaccg cccatttttc tgggcggtgt cggaaagcgt
     4801 aattatttac gcagacccaa gcgggtaatc aacgcgcgat acgtatcggg ctgggtacgg
     4861 cgcaagtagg ccagcaggcg gcggcgttgg ctgaccattt tcaacaggcc gcgacggctg
     4921 tggtggtctt tggggttggc tttgaagtgg ggggtcaggt cgttgatgcg gaaagtcaac
     4981 agagcgactt gtacttcgga agagccggtg tcgccttctt tgcgttggaa atctttaacg
     5041 atttgtgctt tttgttctac ggtcagtgcc ataatgaaaa ctccaaaaat ataagaatcc
     5101 ccatagggat tcagacaagt ttgccaagcc tgaagacaac ggcaaactcc ctatgcccaa
     5161 gataggacaa cgtggcatta tgacacaatt cccgcatttc tgcacaatat tttaagaccg
     5221 tggaagtaac cgttaaaaat gccgtctgaa gcattgtctg cttgagacgg caatgttcag
     5281 acggcatatg cgcttcaaac cacgatttct tctttcttct tcggttcttt accgatattg
     5341 tcgcggctca aaccgaacat tagcagaagc gggctggcaa ccaatacgga agaataaatg
     5401 ccgaacacga tgccaatggt caacgccata gaaaagccgt gcaaggccgc accgccgaac
     5461 accagcatag aaacaaccat cgcctcggtc gaaccgtggg taatgatggt gcggctcatc
     5521 gttgcggtaa tcgcgttgtc gatgacttcc ggcacggcat gtccgcgcat cgccggcttg
     5581 cggaagtttt cacggatacg gtcgaagacg acgacggatt cgttcacaga atagcccaat
     5641 acggcaagga tacccgccaa gacggtcagc gaaaattccc attggaagaa ggcaaagcag
     5701 ccgagaataa tcacgatgtc gtgcatattg gcgataatgg cagatacggc aaaacgccat
     5761 tcaaaacgca tcgacaggta aataatgatg ccgataacga caaaacctaa agccatcaat
     5821 ccattactta ccaattcctc accgacttgc gggccgataa attcgacttg gcgcaaggta
     5881 acgtcgggac tgtctttttt cagcaaatcc ataacctgat tggacaactg tgcggaagta
     5941 acaccttctt tgttcggcag gcggatcatg atgtgtttgt tcgtacccaa tgcctgaacc
     6001 tgtacatcac ctattttcag cgtatcgagg cgttcgcgca tcttattgac atccgcaccc
     6061 tgctgatatt ggacttccat taccgtaccg ccggtaaatt cgacagagaa attcagacct
     6121 ctggtaacca aaaagaatac ggcggcaata aaggtaacca acgaaataaa ggtcgtcagt
     6181 ttgccgtagc tcataaacgg aatatcgcgt ttgattttaa agagttccat agcttactcc
     6241 ttgcctcctg ctatttcggc tttcggcttc cacaccgaac caatggaaat attctgcaat
     6301 ttgcgtctgc gtccgtacca cagattgacc aacgcacgga atacgacgac ggacgaatac
     6361 atcgaagtca gaatacccaa acagtgtacg accgcaaaac cgcgtaccgg gccggaaccg
     6421 aataccaaaa gcgcgatacc ggcaatcagc gaagtcaggt tggaatcgac aatggtcgcc
     6481 catgcgtgtt ggaaaccgag attgattgcc tgctgcggcg gcacgccggc acgcaattct
     6541 tcgcggatac gttcgttaat caagacgttg gagtcgattg ccatacccaa agtcaacgcc
     6601 agcgcggcca tacccggtaa cgtcaacgtt gcctgcatgg cagacaaaat accgattagg
     6661 aacagtatgt tggcactcaa tgcaatggta gaaaagaaac ccatcagacg atagtaaacc
     6721 accatgaatg cagcaacgat ggcaaaaccc cataaagtcg aatggaagcc tttttcgatg
     6781 ttctccttac ccaaagacgg accgatggta cgttcttcga caatctgcat cggcgcggca
     6841 agagaaccgg cacgcaacag caaagacgta tcattggctt cggctgccgt catgcttccg
     6901 gaaatttcca cgcgtccgcc ggtaatggca gtacggataa ccggcgcggt tacaacctcg
     6961 gattttcctt ggtcgatcaa aaccatcgcc atgcgtttgc cgacatttgc ggcagtcagt
     7021 tcgccaaaaa tgctgccacc cgcgctgtcc aagctcagac tgacggcagg tgcgcccatt
     7081 tggtcgaaac tcggttgcgc atcgttgatg ttgtcgcccg tcagctcgac ctgtttgctg
     7141 attagcagag tttcgggacg atctccgccg cttgaaagca gctcataacc gctcggcacg
     7201 ttgccttcca atgcctcgcg caacttggca ggatcgtcct ccaccatacg caattccaaa
     7261 gtcgcggtac ggccgatgat gtcttttgcc ttggcagtat cctgaacgcc cggaagctgc
     7321 acgacgatac ggtcggcacc ggactgctgg atgacgggtt cggccacgcc caactcgttc
     7381 acacggttgt gcagggtagt gatgttctgt ttgaccgcat cggaacgcac tttattgacc
     7441 gcctcttccg aaagcgtcaa gacgatattg ctgccgtctg aattcagcgt tgcttcagga
     7501 aacagcttgc gcaactgcgg cagagccttt tgcacatcac ctgcatcctg caaagggacg
     7561 gtcaggctgt ttccagcctg acgcaccgtg ccgctgcgga ttttttcgcg gcgcagttcg
     7621 cggcggatgt cgcccgaata acgttcaaac gttttctgca tcgccgcttt catatcgacc
     7681 tgcatggtga aatgcacgcc gccgcgcaag tccaaaccca aaaacatcgg attggctttg
     7741 attttcgcca tccattcggg gctgtccgcc aacaggttga gcgcggtaat atacccttcg
     7801 cccaaagtgt tttcgatgac gtcgcgcgct ttaagctgcg tttctgtgtc tttgaaacgc
     7861 actttcagtg aattgtccac aacaaacatc ccgtcggtct gaatacctgc gtttttcagc
     7921 gcggcatcca ctttgaattg agtctgttcg ttgatgatga tggcttgtcg gttggtcgat
     7981 acctgcacgg cgggtgtttc gccgaatagg ttgggcagcg aatacactgc ggcaaccgca
     8041 atcgtgaaca caatcagcag atatttccat aaaggataac ggttcatcat tgttccttaa
     8101 tggttggaac cccacccttt cggtggtgtc ggaatcgggc tatttcagaa gaggcaaaaa
     8161 cccttcccag ccaggcaaga ccggaaagcg gcatcctgaa tatgccgccc tgcgtgtcgg
     8221 aacatggtca agccttcggt tggaattcaa aacaaagtgc cgcattcggg cttttccgat
     8281 gcggcttgtc ggcacaaatc aatcgacttt tgcagaaatc gcattgcgtt ccacttcgac
     8341 ctcgattttt gtaccctgtc cgatatccac ggtaaaaaac tgttcgccga ctctggttac
     8401 cttacccttg aaacctgccg ccaagaccac tttgtcgccg actttcaagg cggcaagcat
     8461 tgcctgatgc gctttgaatt tcttttgctg cggacgcatg atcaggaagt agaacaccac
     8521 cataatcaac actaaaggag caaattgtgc aacagcttga ttcataattt atccgttctt
     8581 tctaatatgg ttgaaaatcg agaggggtat ataataacat aagaccgtaa acaatatatc
     8641 gggtttgccg tccgtaccga ccgtataccg cagcctgccc gtccacaaac ccatgtcctt
     8701 gacccgccta atcttgaaat tctatgcact attgcgcctc tttttgggca aaaacgcccg
     8761 caccgcatgg atttcgcatc ccgcctgcac cgggcacgaa cccggcgcaa accatcccga
     8821 ttcgcccgac cgcatcctct gcatcgagca ggcattgcgc cgcgccggta tttggcagca
     8881 cctccaaacc atagaggcgg aagaaatcag cgatacgcgc ctcgcacttg tccactcgag
     8941 caaatatctg aaccgtttgg aatcttgcct gccccaaaaa ggcaagattt tccgcctgga
     9001 taacgacact gcaatcagca caggctcgct gtctgccgca cactttgccg ccggttcggc
     9061 agttcaggca gtcgacatgg tcatgaaccg taaagcatgg catgcctttt gcgccgcccg
     9121 cccgcccgga caccatgcgg gcagcggcaa agccggcgga ttctgcctgc tgaacaacgt
     9181 tgccgccggc gtcatgcatg ccattgccga ataccgcctg aaacgcattg ccgtcatcga
     9241 tttcgatgtc cactacggcg acggtacggc agaaatattc aaagacgatc cgcgcatcct
     9301 gtttttcaac ctgtttgaaa ccgacctttt ccccttcccc gaaaacaacg atatgcccga
     9361 cggcggcaat atggtgcacc tgcccttgcc gccgggaacg ggcagccgca cattccgcga
     9421 agccgtccgc agacagtggc tgccccggct tgccgcattc aaacccgaac tggtgctgct
     9481 gtcggcagga ttcgacgcac accgtctaga cgaatcgggc aggctcaacc tgcacgaggc
     9541 ggattttgcc tggctgacac acaaaatcat tcagacggca tcgggctgcc ccggcaaaat
     9601 cgtatccgta ctcgaaggcg gctacaccct tgaacctctg gcacaatctg ctgccgagca
     9661 tatccgcgtg ctggcagggc tgggcaaatc cgatgccgca accgcctatc agaaaacact
     9721 ggacccaaca aaaaaacggt ttgccaaacc gaaaaccgga caggtgcgcc aacctaccca
     9781 atccgaccgt tacga
//
LOCUS       DAWITQ010000066         9760 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.066, whole genome shotgun sequence.
ACCESSION   DAWITQ010000066 DAWITQ010000000
VERSION     DAWITQ010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9760)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9760)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9760
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.066"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(163..1209)
                     /gene="adhP"
                     /locus_tag="WIX18_001210"
     CDS             complement(163..1209)
                     /gene="adhP"
                     /locus_tag="WIX18_001210"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
                     /protein_id="HEZ5238319.1"
                     /translation="MKMQAVVVNKNVAGDVEIVEREVRPLEYGEALVEVEYCGVCHTD
                     LHVAAGDYGEKPGRVLGHEGIGLVKEVADGVKNLKVGDRVSIAWLFQSCGSCEYCNTG
                     RETLCRSVLNAGYTADGGMATHCIVSADYAVKVPEGLDPAQASSITCAGVTTYKAIKV
                     SSVRPGQWIAIYGAGGLGNLGVQYAKKVFGAHVVAIDINDDKLAFAKETGADLVVNAA
                     KEDAAKVIQEKTGGAHAAVVTAVSAAAFNSAVNCVRAGGRVVAIGLPPESMDLSIPRL
                     VLDGIEVVGSLVGTRKDLEEAFQFGAEGLVVPKVQLRALDEAPAIFQEMREGKITGRM
                     VIDMKKECGCGHHH"
     gene            complement(1492..1881)
                     /locus_tag="WIX18_001211"
     CDS             complement(1492..1881)
                     /locus_tag="WIX18_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HEZ5238320.1"
                     /translation="MKNVQKGFTLLELMIAVAILGILTLITYPSYKTYIRRVRLTEVR
                     TTLLHNAQTMERYYRQKGTFQTYDQTKLKQNEYFKITLSEVSPDHFTLQADPNPMTNE
                     GETCVVTLNDGGTIAASGTNQSCPGFD"
     gene            2107..3285
                     /locus_tag="WIX18_001212"
     CDS             2107..3285
                     /locus_tag="WIX18_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacA family efflux pump subunit"
                     /protein_id="HEZ5238321.1"
                     /translation="MAKMMKWAAVAAVAAAAVWGGWSYLKPEPQAAYITEAVRRGDIS
                     RTVSATGEISPSNLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTEK
                     SKLETYQAKLVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAEL
                     KALIRQSKISINTAESELGYTRITATMDGTVVAILVEEGQTVNAAQSTPTIVQLANLD
                     MMLNKMQIAEGDITKVKAGQDISFTILSEPDTPIKAKLDSVDPGLTTMSSGGYNSSTD
                     TASNAVYYYARSFVPNSDGKLATGMTTQNTVEIDGVKNVLIIPSLTVKNRGGKAFVRV
                     LGADGKAAEREIRTGMRDSMNTEVKSGLKEGDKVVISEITAAEQQESGERALGGPPRR
                     "
     gene            3351..5285
                     /locus_tag="WIX18_001213"
     CDS             3351..5285
                     /locus_tag="WIX18_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacB family efflux pump subunit"
                     /protein_id="HEZ5238322.1"
                     /translation="MSLIECKNINRYFGSGENRVHILKDISLSIEKGDFVAIIGQSGS
                     GKSTLMNILGCLDTAGSGSYRIDGIETAKMQPDELAALRRERFGFIFQRYNLLSSLTA
                     RDNVALPAVYMGAGGKERSARAEKLLQDLGLASKEGNKPGELSGGQQQRVSIARALMN
                     GGEIIFADEPTGALDTASGKNVMEIIHKLHEAGHTVIMVTHDPGIAANANRVIEIRDG
                     EIISDTSKNPEIPASNVGRIQEKASWSFYYDQFVEAFRMSVQAVLAHKMRSLLTMLGI
                     IIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTLTIDDAK
                     IIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFDENDV
                     KEDAQVVVIDQNVKDKLFADSDPLGKTILFRKRPLTVIGVMKKDENAFGNSDVLMLWS
                     PYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTEDFFMNNSDSIRQ
                     IVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERTKEIGIRMAIGARRGNILQ
                     QFLIEAVLICVIGGLVGVGLSAAVSLVFNHFVTDFPMDISAMSVIGAVACSTGIGIAF
                     GFMPANKAAKLNPIDALAQD"
     gene            complement(5603..6385)
                     /locus_tag="WIX18_001214"
     CDS             complement(5603..6385)
                     /locus_tag="WIX18_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbC family protein"
                     /protein_id="HEZ5238323.1"
                     /translation="MKTKLIKILTPFTVLPLLACGQTPVSNANAEPAVKAESAGKSVA
                     ASLKARLEKTYSAQDLKVLSVSETPVKGIYEVVVSGRQIIYTDAEGGYMFVGELINID
                     TRKNLTEERAADLNKIDFASLPLDKAIKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEK
                     MTDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVGGSICDNPVA
                     ETTSLGEQFGFNGTPTLVFPNGRSQSGYSPMPQLEEIIRKNQ"
     gene            6524..8713
                     /locus_tag="WIX18_001215"
     CDS             6524..8713
                     /locus_tag="WIX18_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HEZ5238324.1"
                     /translation="MIYHRIAVNVPLSDGLLTYSHSEPLPQGMRVLVPFRNKTVVGMV
                     WETDIAPDMDTARILSIQTTFLDEPPLPESWRDLLSFTSRYYHYPTGQAVFAALPQGL
                     KETRAVEMPQPPLFYALNEAGRAQTPPPARFNKKAALWDALLSGEMTMAALKQVNAQA
                     VKLIENWAEQGWIETTEAAKPVLRSCNGQASHSEFVLNADQQKASDAIQTALGRFQPF
                     LLYGITGSGKTEVYFDAMAKVLAQGRQVLFLLPEINLTPQLLKRVENRFADVPTAVLH
                     SQMAAGRRTQDYLRAMLGQAKLVIGTRLAVFTPMDDVGLIVVDEEHDGSFKQDNELRY
                     HARDLAVWRAKQSGCPVVLGSATPSLESWHKVQSGAYRLLQLTERAHTAAQLPQVDIL
                     NVGRLKLDNGFSPQALQLLKQNFEAGGMSLVYLNRRGFAPALFCGDCGHTFGCPNCSA
                     KMVLHQRVRQLRCHHCDHREPIPFKCPDCGNQDLTAVGHGTQRVEETLRAFLPKAAVV
                     RVDRDSTAHKNDWADLYRRIADNEIDILVGTQMLAKGHDFARLNLVIVLNADGSLYSA
                     DFRAPERLFAELMQVSGRAGRADKPGKVLIQTQLPEHPVFAAVKAQDYAVFAENELNE
                     RQMFAMPPFGFQTAVRADAPRVADALEFLNAAKETLAPLLPASVSQFGAAPMLMVRLA
                     ERERAQIFLESPSRQDLHRAVSLWVQVLQQNRDGKIRWSVDVDPQEA"
     gene            complement(8760..9563)
                     /locus_tag="WIX18_001216"
     CDS             complement(8760..9563)
                     /locus_tag="WIX18_001216"
                     /inference="COORDINATES: protein motif:HMM:NF017727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HEZ5238325.1"
                     /translation="MAALLLAASAILPFSPQTASFFVAAYWLVLLLFCARLIWLDRNT
                     DNFALLMLLAAFTVFQTAYAATGDLNLLRAQVHLNMAAVMFVSVRVSVLLGAEALKKC
                     RLKDPVFIPNVVYKNIAITFLLLHAAAELWLPAQTAGFTALAVGFILLAKLRELHHHE
                     LLRKHYVRTYYLLQLFAAAGYLWTGAAKLQNLPASAPLHLITLGGMMGGVMMVWLTAG
                     LWHSGFTKLDYPKLCRIAVPILFAAAVFVLYLLTFVPIFRANAFTDDPE"
     gene            complement(9586..>9760)
                     /locus_tag="WIX18_001217"
     CDS             complement(9586..>9760)
                     /locus_tag="WIX18_001217"
                     /inference="COORDINATES: protein motif:HMM:NF017727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HEZ5238326.1"
                     /translation="RPFFVGATVLAILGALVFFISPGAVVLHRQIFLELMLPAAYGGF
                     LTAALLDWTGFFE"
BASE COUNT         2263 a         2523 c         2846 g         2128 t
ORIGIN      
        1 ccgccttgtc ctgatttttg ttaatccact ataatgacgt gttgcgataa gggttttcag
       61 acggtatttc aaacagaaca gattaaaatc aaatccaaat ccataaaaaa tgccgtctga
      121 acagcgttca gacggcattt cgatgtgtat cgccacgtca aatcagtggt ggtggccgca
      181 gccgcattct tttttcatat cgattaccat acgaccggtg attttgcctt cgcgcatttc
      241 ttggaaaatg gcgggtgctt catccaaagc acgcagttgg actttcggca caaccaaacc
      301 ttccgcgccg aattggaagg cttcttccaa atctttgcgc gtgccgacca aagagccgac
      361 cacttcgatg ccgtccaaaa ccaaacgcgg gatggacaaa tccatcgatt ccggcggcag
      421 tccgatggca accacacgtc cgcccgcgcg gacgcaattc acggcagagt tgaatgcggc
      481 agcagatacg gcggttacga ccgcagcgtg tgcgccgcct gttttttcct gaatcacttt
      541 ggcagcgtcc tctttggcgg cgttgacaac caaatccgcg ccggtttctt tggcaaacgc
      601 cagtttgtcg tcgttgatgt cgatggcgac aacgtgcgcg ccgaatactt ttttcgcgta
      661 ttggaccccc aagttgccca aaccgcccgc gccgtagatg gcaatccact gtcccggacg
      721 aacactggaa actttaatgg ctttataagt ggtcacgccg gcacaagtaa tgctcgaagc
      781 ttgcgcagga tccaaacctt cagggacttt gaccgcgtaa tcggcactca cgatacagtg
      841 ggtcgccatg ccgccgtcgg cagtatagcc agcgttcaat acagagcggc acaaggtttc
      901 gcggccggta ttgcagtatt cgcaagaacc gcagctttgg aacagccagg cgatgctgac
      961 gcggtcgccg actttcagat ttttcacacc gtcggcaact tctttaacca aaccgatgcc
     1021 ctcgtgtccc agcacgcggc ccggtttttc gccgtagtcg cctgccgcaa cgtgcaggtc
     1081 ggtgtggcac acgccgcaat attcgacttc gaccaacgcc tcgccgtatt ccaacgggcg
     1141 aacctcgcgt tcgactattt ccacatcgcc cgctacattt ttattcacaa caactgcctg
     1201 cattttcatg attgcgctcc ttagttacgg caaaaaaacc tgtaaacgga atgttgtccg
     1261 atataagggt aagcatacgc ttccgcatct cacaggtcaa gtggtatgtt gttgaaaaat
     1321 atagattata tgttatatta taacagcttg gaaaggcgcg gcatcggggc ggttgccgga
     1381 tgaggggcgg caggtttcaa gtttgaaaaa ccggacggca aactcgtaaa gataccgtct
     1441 gaagctgtgt ccggacggca tctttacggg tttgcgggct tcggcggagg attagtcgaa
     1501 gccggggcag gattggtttg taccggaagc ggcaatggta ccgccgtcgt tgagcgtaac
     1561 gacgcaggtt tcgccttcgt tggtcatcgg attggggtcg gcctgaaggg tgaagtggtc
     1621 ggggctgact tcgcttaagg taatcttgaa atattcgttt tgtttcagtt tggtttggtc
     1681 gtaggtttga aacgtccctt tttggcggta gtaacgttcc atggtctgcg cgttgtgcag
     1741 cagggtcgtc ctgacttccg tcaggcggac gcgccggatg taggttttat aggaagggta
     1801 ggtgatgagc gtcaggatgc cgaggatggc gacggcaatc atcagctcga gcagcgtaaa
     1861 gcctttttga acgtttttca tagcaatgtg tttccatttg tttgtcggtc ggcgacatta
     1921 taacgccgta tcggaaatgg cggaatatgt aaacggattg aaattttcgg gaaagcagat
     1981 tgtataagcc atttaaaaca aatggttatt tttattgtcg gcagtttgcc gccttggatg
     2041 gggcagggac ttgcggtaga atccgcttcc gatttatggg attgacgcat acagagaatt
     2101 gaaaacatgg caaaaatgat gaaatgggcg gctgttgcgg cggtcgcggc ggcagcggtt
     2161 tggggcggat ggtcttatct gaagcccgag ccgcaggctg cttatattac ggaagcggtc
     2221 aggcgcggcg acatcagccg gacggtttct gcaacagggg agatttcgcc gtccaacctg
     2281 gtatcggtcg gcgcgcaggc atcggggcag attaagaaac tttatgtcaa actcgggcaa
     2341 caggttaaaa agggcgattt gattgcggaa atcaattcga cctcgcagac caatacgctc
     2401 aatacggaaa aatccaagtt ggaaacgtat caggcgaagc tggtgtcggc acagattgca
     2461 ttgggcagcg cggagaagaa atataagcgt caggcggcgt tatggaagga aaacgcgact
     2521 tccaaagagg atttggaaag cgcgcaggat gcgtttgccg ccgccaaagc caatgttgcc
     2581 gagctgaagg ctctaatcag acagagcaaa atttccatca ataccgccga gtcggaattg
     2641 ggctacacgc gcattaccgc aacgatggac ggcacggtgg tagcgattct cgtggaagag
     2701 gggcagactg tgaacgcggc gcagtctacg ccgacgattg tccaattggc gaatctggat
     2761 atgatgttga acaaaatgca gattgccgag ggcgatatta ccaaggtgaa ggcggggcag
     2821 gatatttcgt ttacgatttt gtccgaaccg gatacgccga ttaaggcgaa gctcgacagc
     2881 gtcgaccccg ggctgaccac gatgtcgtcg ggcggctaca acagcagtac ggatacggct
     2941 tccaatgcgg tctactatta tgcccgttcg tttgtgccga attcggacgg caaactcgcc
     3001 acggggatga cgacgcagaa tacggttgaa atcgacggcg tgaaaaatgt gctgattatt
     3061 ccgtcgctga ccgtgaaaaa tcgcggcggc aaggcgtttg tgcgcgtgtt gggtgcggat
     3121 ggcaaggcgg cggaacgcga aatccggacc ggtatgagag acagtatgaa taccgaagta
     3181 aaaagcgggt tgaaagaggg ggataaagtg gtcatctccg aaataaccgc cgccgagcag
     3241 caggaaagcg gcgaacgcgc cctaggcggc ccgccgcgcc gataaacgaa tatgccgtct
     3301 gaacacggaa acggtttcag acggcatttg ttattgattt acggaatatt atgagcttga
     3361 tcgaatgtaa aaacatcaac cgctatttcg gcagcggcga gaaccgcgtc catattttga
     3421 aagacatcag cctgtcgata gagaagggcg attttgtcgc catcatcggg cagtccggtt
     3481 cgggcaagtc cacgctgatg aacatactcg gctgtttgga taccgccggt tccggttcgt
     3541 accgaatcga cggcatcgaa actgccaaaa tgcagcctga cgagctggcg gcattgcgcc
     3601 gcgaacgctt cggtttcatc ttccaacgct acaacctctt aagctcgctg accgcaaggg
     3661 acaacgtcgc gctgccagcc gtgtatatgg gcgcgggcgg caaagagcgt tccgcgcgtg
     3721 cggagaagtt gttgcaggat ttgggtttgg caagcaaaga gggcaacaag cccggcgaac
     3781 tctcgggcgg acagcagcag cgcgtctcca tcgcccgcgc cctgatgaac ggcggagaaa
     3841 tcatcttcgc cgacgagccg accggcgcgc tcgataccgc cagcggcaaa aacgtgatgg
     3901 aaatcatcca taagctgcac gaagccgggc ataccgtcat tatggtcacg cacgaccccg
     3961 gcatcgccgc caatgccaac cgcgtcatcg aaatccggga cggcgaaatc atttccgaca
     4021 cctcgaaaaa tccagaaatc cccgcaagca atgtcgggag gattcaggaa aaagcctcgt
     4081 ggtcgtttta ttacgaccag tttgtcgaag ccttcagaat gtcggtgcaa gcagtattgg
     4141 cgcacaaaat gcgttcgctt ctgacgatgc tcggcatcat catcggtatc gcttcggttg
     4201 tctccgtcgt cgcattgggc aatggttcgc agaaaaaaat ccttgaagac atcagttcga
     4261 tagggacgaa caccatcagc atcttcccgg ggcgcggctt cggcgacagg cgcagcggca
     4321 ggattaaaac cctgaccata gacgacgcaa aaatcatcgc caaacaaagc tacgttgctt
     4381 ccgccacgcc catgacttcg agcggcggca cgctgaccta ccgcaatacc gacctgaccg
     4441 cttctttgta cggcgtgggc gaacaatatt tcgacgtgcg cggactgaag ctggaaacgg
     4501 ggcggctgtt tgacgaaaac gatgtgaaag aagacgcgca ggtcgtcgtc atcgaccaaa
     4561 atgtcaaaga caaactcttt gcggactcgg atccgttggg taaaaccatt ttgttcagga
     4621 aacgcccctt gaccgtcatc ggcgtgatga aaaaagacga aaacgctttc ggcaattccg
     4681 acgtgctgat gctttggtcg ccctatacga cggtgatgca ccaaatcaca ggcgagagcc
     4741 acaccaactc catcaccgtc aaaatcaaag acaatgccaa tacccaggtt gccgaaaaag
     4801 ggctgaccga tctgctcaaa gcgcggcacg gcacggaaga tttcttcatg aacaacagcg
     4861 acagcatcag gcagatagtc gaaagcacca ccggtacgat gaagctgctg atttcctcca
     4921 tcgccctgat ttcattggta gtcggcggca tcggcgtgat gaacatcatg ctggtgtccg
     4981 ttaccgagcg caccaaagaa atcggcatac ggatggcaat cggcgcgcgg cgcggcaata
     5041 ttttgcagca gtttttgatt gaggcggtgt taatctgcgt catcggcggt ttggtcggcg
     5101 tgggtttgtc cgccgccgtc agcctcgtgt tcaatcattt tgtaaccgac ttcccgatgg
     5161 acatttccgc catgtccgtc atcggcgcgg tcgcctgttc gaccggaatc ggcatcgcgt
     5221 tcggctttat gcctgccaac aaggcggcca aactcaatcc gatagacgca ttggcgcagg
     5281 attgaggttg gacaaagatg ccgcctgaag ctgcagaacc ggtcattttg gagcagaaac
     5341 ttattggaca aaaacggttt cttagattct acgttccaaa ttcccacttg cgtgggaatg
     5401 acggcggtgt gtttcgtatt gttcaattta ttattttcaa tcattcaatg ggttaggatg
     5461 tgtttgttgg cttgctgtac tggtttaaat ttaatccact ataaatttaa tccactataa
     5521 ctttcagtgc ggattggttt tcaggcggca tttcccgcaa aaaaggcttg gaattttcca
     5581 agccttttgt tttgcggatg gattattgat ttttgcggat gatttcctcc agttggggca
     5641 tcgggctgta gccgctttgg ctgcgcccgt tggggaagac gagggtcggc gtgccgttga
     5701 agccgaattg ttcgcccaag gaagtggttt ccgcgacggg attgtcgcag atgctgccgc
     5761 cgaccgggaa tttgccttta cgcatccaat ccgtccacgc tttggcgcgg tcgggctgac
     5821 accataagat ttgcgccttg cgcgcggcat cggggtgcag gccggcaatg ggcatcataa
     5881 agctgtaaac cgtcacgtcg gtcatttttt caaactcgtg ttccaagcgt ttgcagaacg
     5941 gacaatcggg gtcggagaag acggcgactt tcagcttgcc gttgccgcgc acttctttga
     6001 tggctttgtc caaaggcagg gaggcgaagt cgattttgtt caaatcggcg gcgcgttctt
     6061 cggtcaggtt tttgcgcgtg tcgatgttga tgagttcgcc gacgaacata tagccgcctt
     6121 cggcatcggt gtagataatc tgcctgccgc tgacgacgac ttcgtaaatg cctttgaccg
     6181 gtgtttcgct gacgctcaac actttcaaat cttgggcgga ataggttttt tccaaacgcg
     6241 ctttcaaaga ggcggcaacg gatttgccgg cggactcggc tttgacggcg ggttcggcgt
     6301 tggcattgga aacgggcgtt tgcccgcaag ccagcagcgg gaggacggta aagggggtca
     6361 agattttgat taacttggtt ttcatataaa gatgattgcg cgtgttggaa aagcggaatt
     6421 gtatcaaatc tctgttgcgc ctgcattgcg cctaggctca atttatcgtc tgaaaatagc
     6481 ttatgcctgt taaaatacgc aaaaaaatga tttgcctgcc tgtatgatct accaccgcat
     6541 cgccgtaaac gtgccgcttt cagacggcct tttgacttat tcccattccg agccgctgcc
     6601 gcagggaatg cgggtgcttg tgccttttcg caataaaacc gtggtcggga tggtgtggga
     6661 aacggatatt gcgccggata tggatacggc gcggattttg agtattcaga cgaccttttt
     6721 agacgagccg ccgttgcctg aaagctggcg tgatttgctc tcgtttacgt cgcgttatta
     6781 ccactatccg acggggcagg cggtgtttgc cgcgctgccg cagggtttga aggaaacgcg
     6841 cgcggtggaa atgccgcagc cgccgttgtt ttacgcgctg aacgaagcgg gcagggcgca
     6901 aacgccgccg ccggcgcggt tcaacaaaaa agcggctttg tgggacgcgc tgctgtcggg
     6961 cgaaatgacg atggcagcgt tgaagcaggt aaacgcgcag gcggtgaaat taatcgaaaa
     7021 ttgggcggaa cagggttgga ttgaaacgac ggaagcggcg aagcccgttt taaggtcgtg
     7081 taatgggcag gcttcgcact ctgaatttgt attaaatgct gaccagcaga aggcttccga
     7141 tgccattcag acggcattgg gacgcttcca gccgtttctg ctgtacggca tcaccggcag
     7201 cggcaagacc gaggtgtatt ttgatgcgat ggcgaaagtg ttggctcagg ggcggcaggt
     7261 gttgtttctg ttgcccgaaa tcaacctcac gccgcagctt ttgaagcggg tagaaaaccg
     7321 ttttgccgac gtgccgaccg ccgtgttgca cagccagatg gcggcaggca ggcgcacgca
     7381 agattatttg cgcgcgatgt tggggcaggc gaaattagtc atcggcacgc ggctggcggt
     7441 gttcacgccg atggatgatg tcgggctgat tgtggtcgat gaggaacacg acggctcgtt
     7501 caaacaagac aacgaattac gctaccacgc ccgcgatttg gcggtgtggc gggcgaagca
     7561 gagcggctgc cccgtcgtgc tgggtagcgc cacgcccagc ttggagagct ggcacaaggt
     7621 gcaaagcggc gcgtaccgcc tgctgcaact gaccgagcgc gcccataccg ctgcgcaact
     7681 gccgcaagtg gacatcctca acgtaggccg tctgaaacta gacaatggct tctcgccgca
     7741 agccttgcag cttttgaaac agaattttga agcgggcggt atgtcgctgg tgtacctcaa
     7801 ccgtcgcggc ttcgcgcccg cgctgttttg cggcgactgc ggccatacct tcggctgccc
     7861 gaactgctcc gccaaaatgg tgctgcacca acgcgtccgc caactgcgct gccaccactg
     7921 cgaccaccgc gaacccatac cgttcaaatg ccccgactgc ggaaatcaag acctgaccgc
     7981 cgtcggacac ggcacgcagc gcgtcgaaga aaccctgcgc gccttcctgc ccaaggcagc
     8041 cgtcgtccgc gtggacaggg acagcaccgc gcacaaaaac gactgggcgg atttgtaccg
     8101 ccgcatcgcc gacaacgaaa tcgacattct ggtcggcacg cagatgctcg ccaaaggcca
     8161 tgactttgcg cggctcaacc tcgttatcgt attgaacgcc gacggcagcc tttacagcgc
     8221 ggatttccgc gcgccggaaa gactgttcgc cgagctgatg caggtgtccg gcagggcggg
     8281 gcgcgccgac aaacccggca aggtgttgat acagacccaa ctgcccgaac atcccgtctt
     8341 cgccgccgtc aaagcgcagg attatgccgt gtttgccgaa aacgaattga acgaacggca
     8401 aatgttcgcc atgccgccct tcggttttca gaccgccgtc cgcgcggacg cgccgcgtgt
     8461 tgccgatgcg ctggaatttc tcaatgccgc caaagaaacc ctcgccccgc tgttgcccgc
     8521 aagcgtttcc cagtttggcg ccgcccccat gctgatggtg cgcctcgccg aacgcgaacg
     8581 cgcgcaaatc ttcctcgaat ccccgtcccg acaggatttg caccgtgccg tgagtttgtg
     8641 ggtgcaggtg ttgcagcaaa accgcgacgg caaaattaga tggtcggtgg atgtcgatcc
     8701 gcaggaggct tgattatcgg caatacgatg ccgtctgaaa accgtttcag acggcatttt
     8761 tattccggat cgtctgtaaa cgcgttcgcc cgaaagatcg gtacgaatgt cagcaggtaa
     8821 agcacgaaca cggcggcggc gaaaaggatg gggacggcga tgcggcagag tttcgggtag
     8881 tcgagcttgg taaagccgct gtgccacagt ccggcagtca gccacaccat catcacgccg
     8941 cccatcatgc cgccgagggt aatcaggtgc aggggcgcgg aggcaggcag gttttgcaat
     9001 ttcgccgcgc ctgtccacaa atagcctgcg gcggcaaaaa gttggagcag gtaataagtg
     9061 cggacgtagt gtttgcgtaa gagttcgtga tggtgcagtt cgcgcagctt ggcgagcaag
     9121 atgaagccga cggcgagcgc ggtaaaaccg gcggtttgcg cgggcagcca aagttcggcg
     9181 gcggcgtgca gcagcaggaa ggtgatggcg atgtttttat agacaacgtt ggggatgaat
     9241 acagggtctt tcagacggca ttttttgagg gcttccgcgc ccagaaggac actgacgcgg
     9301 acggatacga acatgaccgc cgccatattc aaatgcactt gcgcgcgcaa caggttcaaa
     9361 tcgccggttg cagcgtatgc cgtctgaaaa acagtgaacg cggcaagcag cattaagagg
     9421 gcgaagttgt cggtgtttcg gtctagccaa atcagccggg cgcagaacag cagcaacacc
     9481 agccaatagg cggcgacgaa aaacgaggca gtttgcggcg aaaagggcag tatagcggat
     9541 gcggcgagca ataatgccgc catcaaagtc gcgacaggtt tcaggttact cgaaaaaacc
     9601 cgtccagtcc aacaaagccg cagtcaggaa accaccatat gctgcaggca gcatgagttc
     9661 taagaagatt tggcggtgca ggacgacggc accggggctg atgaaaaaca ccaacgcgcc
     9721 gagtatggca agcactgtcg cgccgacgaa aaacgggcgc
//
LOCUS       DAWITQ010000067         9686 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.067, whole genome shotgun sequence.
ACCESSION   DAWITQ010000067 DAWITQ010000000
VERSION     DAWITQ010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9686)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9686)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9686
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.067"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(37..762)
                     /locus_tag="WIX18_001218"
     CDS             complement(37..762)
                     /locus_tag="WIX18_001218"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HEZ5238327.1"
                     /translation="MRIPLLAPDNYAFPDPAYALARCDGLVGVSRDLDAGRLLEAYRN
                     GVFPWFLRDGWFFWYAVGPRAVIVPERLHVPRSLEKTLRNCSYRVTVNGCFAEVVAHC
                     AAAVRPNQDGTWIAPEFQTAYLKLHEMGYAHSFECHYPDENGKTRLAGGFYGVQIGRV
                     FYGESMFALQPDASKIAFACAVPFLASLGVELIDCQQDTGHMRRFGSELLPFADFAER
                     LRMLNAVPLKEEIGRREVACKGL"
     gene            complement(832..1335)
                     /gene="fur"
                     /locus_tag="WIX18_001219"
     CDS             complement(832..1335)
                     /gene="fur"
                     /locus_tag="WIX18_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HEZ5238328.1"
                     /translation="MIVGKQAEIAYYSVYYFTGILNIMEKFSNIAQLKDSGLKVTGPR
                     LKILDLFETHAEEHLSAEDVYRILLEEGVEIGVATIYRVLTQFEQAGILQRHHFETGK
                     AVYELDKGDHHDHIVCVKCGEVTEFHNPEIEALQDKIAEENGYRIVDHALYMYGVCSD
                     CQAKGKR"
     gene            1493..1870
                     /locus_tag="WIX18_001220"
     CDS             1493..1870
                     /locus_tag="WIX18_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HEZ5238329.1"
                     /translation="MNKTLILVLSALFSLTACSVERVSLFPSYKLKIIQGNELEPRAV
                     AALRPGMTKDQVLLLLGSPMLRDAFHTDRWDYTFNTSRNGIIKERSNLTVYFENGVLV
                     RTEGDVLQNAAEALKDRQNTDKP"
     gene            1880..2689
                     /gene="dapB"
                     /locus_tag="WIX18_001221"
     CDS             1880..2689
                     /gene="dapB"
                     /locus_tag="WIX18_001221"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HEZ5238330.1"
                     /translation="MTPLKIAIAGVNGRMGRVLVEAVNNHPDTVLSGALEHSGSEALG
                     LDAGYAVGLKTGIAISDDVDAVLAQSDVLIDFTRPEPTLKHLQKCVEKQVNIIIGTTG
                     FDDAGKAAIHTAAEQTGIVFAANFSVGVNLTFHILDTVARVLNEGYDIEIIEGHHRHK
                     VDAPSGTALRMGEVIAGALGRDLKQCAVYGREGHTGPRDPSTIGFATVRAGDIVGDHT
                     ALFATDGERVEITHKASSRMTFAAGAVRAAVWVNGKTGLYDMQDVLGLNNR"
     gene            complement(2803..3213)
                     /locus_tag="WIX18_001222"
     CDS             complement(2803..3213)
                     /locus_tag="WIX18_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238331.1"
                     /translation="MTTYTIPKKDYQFLYIYEGTLLNYTLKNDEFHIIVQNVDYPDFP
                     QEIPTPNYTDWVKIKFKQFSYLKFVYGYATKSQDINIDNTLELGELKQDDEILDYGGA
                     LELIGGRYDFPTAFRIDIVCREIELEFLDQEGFN"
     gene            complement(3215..3460)
                     /locus_tag="WIX18_001223"
     CDS             complement(3215..3460)
                     /locus_tag="WIX18_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238332.1"
                     /translation="MDYFPEAARITKKGGEIVINGTSNNKYLRGIPNEAELARVGLRL
                     KYNGLLKEEFKQLKFHKSSRTNLDSKNLKLIVFEKVK"
     gene            complement(3468..4640)
                     /gene="lpxB"
                     /locus_tag="WIX18_001224"
     CDS             complement(3468..4640)
                     /gene="lpxB"
                     /locus_tag="WIX18_001224"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HEZ5238333.1"
                     /translation="MWGQTNMVDKKSPLIAVSVGEASGDLLGAHLIRAIRKRCPQARF
                     TGIGGELMKAEGFESLYDQERLAVRGFVEVVRRLPEILRIRRGLVRDLLSLKPDVFVG
                     IDAPDFNLGVAEKLKRAGIPTVHYVSPSVWAWRRERVGKIVHQVNRVLCLFPMEPQLY
                     LDAGGRAEFVGHPMAQLMPLEDDRETARQTLGVDAGIPVFALLPGSRVSEIDYMAPVF
                     FQTALLLLKRYPAARFLLPAATEATKRRLAEILQRSEFAGLPLTVTDRQSETVCRAAD
                     AVLVTSGTATLEVALCKRPMVISYKISPLTYAYVKRKIKVPHVGLPNILLGKEAVPEL
                     LQHDAVPEKLAAALADWYEHPDKVAALQQDFRALHLLLKKDTADLAARAVLEEAGC"
     gene            complement(4688..5680)
                     /locus_tag="WIX18_001225"
     CDS             complement(4688..5680)
                     /locus_tag="WIX18_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEZ5238334.1"
                     /translation="MKTHEISKDSVSLIGVAEHEAGQRLDNYLIKILKGVPKSHIHRI
                     IRAGEVRLNKKRCKPDSRIAEGDTVRIPPVRVAEKEMPSERRAAVPARAFDVVYEDDA
                     LLVIDKPSGVAVHGGSGVSFGVIEQLRRARPEAKYLELVHRLDKDTSGLLMVAKKRSA
                     LVKLHEAIRNDHPKKIYLALGVGKLPDDNFHVKLPLFKYTGAQGEKMVRVSADGQSAH
                     TVFRVLSRFSDGILHGVGLSHLTLVRATLKTGRTHQIRVHLQSQGCPIAGDERYGDYQ
                     ANRRLQKLGLKRMFLHASELHLNHPLTGEPLVLKAELPPDLAQFAVMLENGTKM"
     gene            6174..8933
                     /locus_tag="WIX18_001226"
     CDS             6174..8933
                     /locus_tag="WIX18_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HEZ5238335.1"
                     /translation="MKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKG
                     IITRIEPSLEACFVDYGTDRHGFLPFKEVSRSYFQDYEGGRARIQDVLKEGMEVIVQV
                     EKDERGNKGAALTTFISLAGRYLVLMPNNPRGGGVSRRIEGEERQELKAAMAELDIPN
                     GMSIIARTAGIGRSAEELEWDLNYLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRD
                     YFRPDIGEILVDNQEVYDQVAEFMSYVMPGNIGRLKLYEDHTPLFSRFQIEHQIESAF
                     SRSVSLPSGGAIVIDHTEALVSIDVNSARATRGADIEDTAFKTNMEAAEEVARQMRLR
                     DLGGLVVIDFIDMENPKHQRDVENVLRDALKKDRARVQMGKLSRFGLLELSRQRLKPA
                     LGESSHVACPRCAGTGVIRGIESTALHVLRIIQEEAMKDNTGEVRAQVPVDVATFLLN
                     EKRAELFAMEERLDVNVVLIPNIHLENPHYEINRIRTDDVEEDGEPSYKRVAEPEEDE
                     SAKPFGGEKAKAARPEPAVKGVRHTSPAPTAAPEKKTSWWDSFKAWLKRIFGGSETQA
                     APAAETSEKRSTANRSGSRANNRRQNPRRSKREGSKVEVREVAGKTAGQEARADKAET
                     RNNGNRRRNERGDRAAERANEAEIQSRNVQPAATVADAAPSETEMQTGKRRRNGSRSE
                     RSQTAPETAAVAETAVQTAENTPSEPHTAEDKGSKPKSERNRRERDSRDAKERRERNN
                     QRDRRQNGKKRNIPSAAKIEQYLNIHDTADKVRSAAAHVFGETDANAPITVSIADPVA
                     ERDLPTASPAVSNGDAPVYDAAEKIRRATAAILPEGATPKAEAQEMPSETATFTAAAE
                     QARETAQTGGLVLIETDPAALKAWAAQPEVQTGRGLRRSEQPKPSEVATVPAEEMIQV
                     ETRQG"
BASE COUNT         2440 a         3077 c         2277 g         1892 t
ORIGIN      
        1 caccatattt gaacctgacc gaagcataag ccgccatcaa agccccttgc acgccacttc
       61 gcgccgcccg atttcctctt tcaacggcac ggcgttcaac atccgcagac gttcggcaaa
      121 atccgcaaac ggcagcagct ccgaaccgaa acggcgcata tgccccgtat cctgctggca
      181 gtctatcagt tccacaccca aagacgcgag aaacggcacg gcgcaggcaa acgcgatttt
      241 cgacgcatcc ggttgtaatg cgaacatcga ttcgccgtaa aacaccctgc cgatctgaac
      301 gccgtaaaac ccgcccgcca acctcgtttt accgttttca tcgggataat ggcactcaaa
      361 cgaatgcgcg tatcccattt cgtgcagctt caaatatgcc gtctgaaact cgggcgcaat
      421 ccaagttccg tcctgattcg ggcgcaccgc tgccgcacaa tgcgcgacca cttccgcaaa
      481 acagccgttg accgtaaccc gatagctgca gttgcgtagc gttttctcca gcgagcgcgg
      541 aacgtgcaga cgttcgggaa caatcaccgc acgcggcccg accgcatacc aaaaaaacca
      601 accgtctcgc aaaaaccaag gaaacacgcc gttccgatac gcctcgagca gccgccccgc
      661 gtccaaatcc ctgctcacgc cgaccagccc gtcgcaccgt gccaaagcat aggcaggatc
      721 gggaaaggca taattgtcag gggcaagcag cggaatacgc atggcagttc tccaaaaaca
      781 cagacggcat ccaaaatcat gaatgccgtc tgaacaacaa accgtccgga tttaacgttt
      841 gcccttggcc tgacagtcgc tgcacacgcc gtacatataa agcgcgtgat cgacgatgcg
      901 gtagccgttt tcctcggcga ttttgtcttg cagggcttcg atttcgggat tgtggaattc
      961 cgttacctcg ccgcacttca cacagacgat atggtcgtgg tggtcgccct tgtccaactc
     1021 ataaaccgcc ttgcccgttt caaaatggtg gcgttgcaaa atgcccgcct gctcaaattg
     1081 cgtcagcacg cgataaatcg tcgccacacc gatttccaca ccctcttcca acaaaatacg
     1141 gtacacatcc tcggcactca aatgctcttc cgcatgagtc tcgaacaaat ccaaaatctt
     1201 caaacgcggg ccggtaactt tcagtccact gtctttcagt tgcgcaatgt tgctgaattt
     1261 ttccataata ttcaatatcc ctgtaaaata atagacgcta taatacgcaa tttcagcctg
     1321 cttgcccact atcacaccat agcagtttgc aatagcaaaa ccgcaacggc ggacgggcag
     1381 tcggacacag acagggtgaa ataccgctta agcgtatgat tatcgttcgc ttttataaaa
     1441 tattcaagca gtgctacact agacatcccg atttgcacag aaaggttctc ccgtgaacaa
     1501 aaccctcata ctcgtccttt ccgccctgtt cagcctgacc gcgtgcagcg tcgaacgcgt
     1561 ttcactgttc ccctcgtaca aactcaaaat catacagggc aacgaactcg aaccccgcgc
     1621 cgttgccgcc ctgcgccccg gcatgaccaa agaccaagtc ctgctcctgc tcggcagccc
     1681 catgctgcgc gacgcattcc ataccgaccg ctgggactat accttcaaca cctcccgcaa
     1741 cggcatcatc aaagaacgca gcaatctgac cgtctatttt gaaaacggcg tactcgtccg
     1801 caccgaaggc gacgtcctgc aaaacgctgc cgaagccctc aaagaccgcc aaaacacaga
     1861 caaaccataa ggaacacaca tgacaccgct caaaatcgct atcgccggcg tcaacggccg
     1921 catggggcgc gtattggttg aagccgtcaa caaccatccc gacaccgtcc tttccggcgc
     1981 gctcgaacac tcgggctcag aagccctcgg gctggacgca ggctacgccg tcggactcaa
     2041 aaccggcatc gccatttcag acgacgttga cgccgttctc gcacaaagcg acgtactcat
     2101 cgacttcacc cgccccgagc ccaccctcaa acacctgcaa aaatgcgttg aaaaacaagt
     2161 caacatcatc atcggcacaa caggcttcga cgatgcgggc aaagccgcta tccacactgc
     2221 cgccgaacaa acaggcatcg ttttcgccgc caacttcagc gtcggcgtca acctcacctt
     2281 ccacatcctc gacaccgtcg cacgcgtatt aaacgaaggc tacgacatcg aaatcattga
     2341 aggccaccac cgccacaaag tcgatgcccc cagcggcacc gcgttacgca tgggcgaagt
     2401 catcgccggc gcgctcggca gagacctcaa acaatgcgcc gtttacggcc gcgaaggcca
     2461 caccggtccg cgcgatccgt cgaccatcgg ctttgccacc gtccgcgcag gcgacatcgt
     2521 cggcgaccac accgccctct tcgccaccga cggcgagcgc gtggaaatca cccacaaggc
     2581 cagcagccgc atgacctttg ccgccggtgc cgtccgcgcc gcagtttggg taaacggcaa
     2641 aacgggtttg tacgatatgc aggacgtact cgggctgaac aaccgttaac ccccatacaa
     2701 aatgccgtct gaaaagatat tgttcagacg gcattttgcc aacaggctcc gtatcggcat
     2761 atcaataaag ttgcttgcgc ggcatgacaa gctacggctc gtttaattga aaccctcctg
     2821 atctaaaaat tctaactcta tttcccggca aactatatct atcctaaaag cagtcggaaa
     2881 atcataccta ccgcctatca attccagcgc acctccataa tccaagattt catcatcctg
     2941 ctttaattcg ccaagttcca atgtattatc gatatttata tcttggctct ttgtagcgta
     3001 tccatagaca aatttcagat agctgaactg cttgaattta atttttaccc agtctgtata
     3061 atttggtgta ggaatctctt gaggaaagtc cggataatcc acattctgga cgatgatatg
     3121 gaattcatcg tttttcaaag tatagtttaa tagagtgccc tcatatatat acagaaattg
     3181 ataatctttt tttggaatgg tataagttgt catattattt taccttttca aaaacaatga
     3241 gtttaagatt ttttgagtcc aagttggttc tactactctt atgaaatttc agttgtttaa
     3301 actcttcctt taacagacca ttatatttta accttaatcc cactcgagcc agttctgctt
     3361 catttggaat tcctcttaaa tacttattgt ttgatgtgcc attaatcaca atttctcccc
     3421 ctttttttgt aatacgtgct gcttcgggaa aataatccat taaccgctca acatcccgcc
     3481 tcttccaaaa ccgcgcgcgc ggccaaatcc gccgtatctt ttttcaacag caggtgcaac
     3541 gccctgaaat cctgttgcag cgcggcaacc ttatcggggt gttcgtacca gtccgccaac
     3601 gccgccgcca gtttttccgg tacggcatca tgttgaagca gctccggcac agcctcctta
     3661 cccaacagga tattcggcag gccaacatgc ggcactttga ttttgcgttt cacataagca
     3721 taagtcagcg gcgaaatctt gtagctgatg accatcggac gcttgcacag cgccacttcc
     3781 aaagtcgccg taccgctcgt taccagcacc gcatccgccg ccctgcacac cgtttcagac
     3841 tgtctgtcgg ttaccgtcag cggtaatccg gcaaactccg aacgctgcaa aatttccgcc
     3901 aaacgccgct tcgtcgcctc cgttgcggca ggcagcagga agcgtgcggc gggatagcgt
     3961 ttcaacaaca ataatgccgt ctgaaaaaac accggcgcca tatagtcgat ttcgctgacg
     4021 cggctgccgg gcagcagggc gaatacgggg atgccggcat ccacgcccaa agtttgccgc
     4081 gccgtttcac ggtcgtcttc caagggcata agctgcgcca tcggatgacc gacaaactcc
     4141 gcacgtccgc ccgcatcgag ataaagctgc ggctccatcg ggaacaggca cagcacgcgg
     4201 ttgacctgat gcacgatttt gcccacgcgt tcccgccgcc acgcccacac cgacgggctg
     4261 acataatgca cggtcggaat gcccgcccgt ttcagctttt ccgccacacc caaattgaaa
     4321 tcgggcgcat cgataccgac aaagacatca ggtttcaacg acagcaaatc ccgtaccagc
     4381 cccctgcgta tccgtaaaat ttccggcagc cgcctgacca cttcgacaaa gccgcgcacc
     4441 gccagccgct cctgatcata aaggctctcg aaaccttccg ccttcatcag ttccccgccg
     4501 atgccggtaa accgcgcctg cgggcaacgc ttgcggatgg cgcgtatcag gtgcgccccc
     4561 aacaggtcgc ccgacgcttc gccgacactg acggcaatca aagggctttt tttatcaacc
     4621 atattcgtct gtccccacat actttcacgt cccgatgccg tctgaaggct tcagacggca
     4681 tcggggttca cattttcgtc ccgttttcca acatcaccgc aaactgcgcc aagtccggcg
     4741 gcagctccgc cttcaacacc agcggctcac ccgtgagcgg atggttcaag tgcagctcgg
     4801 acgcgtgcaa aaacatccgc ttcaaaccca acttctgcaa acgacggttc gcctgataat
     4861 cgccgtagcg ttcgtcgccc gcaatcggac agccttgaga ttgcaggtgg acgcggattt
     4921 ggtgcgtgcg ccccgttttc aacgtcgccc gcaccaaagt caggtgcgac agcccgacac
     4981 cgtgcaaaat gccgtctgaa aaacggctta acacacggaa caccgtatgc gccgactgcc
     5041 cgtccgcact gacgcgcacc atcttttcgc cttgtgcgcc ggtatatttg aacaggggca
     5101 gtttgacatg gaaattgtcg tccggcagtt tgcccacccc cagcgcaagg tagatttttt
     5161 tggggtggtc gttacggatg gcttcgtgaa gtttgacgag cgcgctgcgt ttcttcgcca
     5221 ccatcaacaa gccgctcgta tccttgtcca aacgatgaac caactccaaa tacttcgcct
     5281 ccggacgggc gcggcgcaac tgttcgataa cgccgaaact cacgccgctg ccgccgtgga
     5341 cggcaacgcc ggacggtttg tcgatcacca aaagcgcatc gtcttcgtaa acaacgtcaa
     5401 acgcacgcgc cggtacggcg gcacgccttt cagacggcat ttccttctcc gccacgcgca
     5461 caggcggaat ccgcaccgta tccccctccg caatacggct gtcgggtttg cagcgttttt
     5521 tgttcagccg cacctcgccg gcgcggataa tgcggtggat atggctcttg ggaaccccct
     5581 tgaggatttt tatcagatag ttatcaaggc gttgacccgc ctcatgttcg gcaaccccta
     5641 tcaagctgac cgaatctttg cttatttcgt gcgttttcat ctataatccg aacatccgtt
     5701 tcagcaaaaa gcgcgcccgc cgcgcctcct gaaacggttt actttaaaac ggaattttat
     5761 attaaaaacg cactccgcaa agcattttcc ctgcgcctgt tcccagccgg caggcgcaga
     5821 acgtaatcaa gtttgaattg attttgccgt ttcggcgcgg aagtaagacg gcagccgggc
     5881 cccaagtccc aaacgcaaac cgcccgaaaa cacaggcatc acgataacaa gaagaagccg
     5941 gcacccattt ttccgaccat accgctcgga acgcggcaga cagaccgccg catcgatctt
     6001 tattgccttc tttatccgac ccttccgcac acggttcctc ggaacgtgca tccctgcgga
     6061 ttttcaactc aaaaactgat taccggtttt atccgaagac atcggaaaac ccagccttac
     6121 ggaatgccga accggaccgg cgcgcccgaa tgccgcccgt ccacgaggtg atcatgaaaa
     6181 gaatgttatt caacgcaacg caggccgaag agctgcgcgt tgccattgtc gatggccaaa
     6241 accttttgga cttggacatc gaaacgctgg gcaaagaaca gcgtaaaggc aatatctaca
     6301 aaggcatcat tacccgcatc gagccgtcgc tggaagcgtg tttcgtggat tacggaaccg
     6361 accgccacgg cttcttgccg tttaaagaag tctcccgctc atacttccaa gactacgaag
     6421 gcggacgcgc gcgcatccaa gacgtgctca aagaaggcat ggaagtcatc gtccaagtcg
     6481 aaaaagacga gcgcggcaac aaaggcgccg cgctgaccac cttcatcagc ctcgccggac
     6541 gctatctggt attgatgccg aacaacccgc gcggcggcgg cgtatcccgc cgtatcgaag
     6601 gtgaagagcg tcaagagttg aaagccgcca tggcggaact cgacattccg aacggcatga
     6661 gcatcatcgc ccgtaccgcc ggcatcggcc gcagcgcgga agagttggaa tgggacttga
     6721 actacctcaa acaactctgg caggcgattg aagaagcagg aaaagcgcat cacgacccct
     6781 acctgctctt tatggaaagc tcgctgctga tccgagccat ccgcgactat ttccgccccg
     6841 acatcggcga gattttggtg gacaatcaag aagtttacga ccaagttgcc gagttcatga
     6901 gctacgtcat gccgggcaat ataggccgtc tgaaactcta cgaagaccac acgccgctgt
     6961 tttcccgctt ccaaatcgaa caccaaatcg aaagcgcgtt ttcgcgcagc gtcagcctgc
     7021 cctccggcgg cgcgatcgtc atcgaccata ccgaagccct cgtctccatc gacgtgaact
     7081 ccgcacgcgc cactcgcggc gcagacattg aagacaccgc gttcaaaacc aatatggaag
     7141 ccgccgaaga agtcgcccga caaatgcgcc tgcgcgactt gggcggcttg gtcgtcatcg
     7201 acttcatcga catggaaaac cccaaacacc agcgcgatgt ggaaaacgtc ctgcgcgacg
     7261 cgctcaaaaa agaccgcgcc cgcgtgcaga tgggcaaact ctcccgtttc ggacttttag
     7321 aattgagccg ccaacgtttg aaaccggctt tgggcgaaag cagccacgtc gcctgtccgc
     7381 gctgcgccgg caccggcgtg attcggggca tcgaatccac cgccctgcac gttttacgca
     7441 tcattcaaga agaagcgatg aaggacaaca ccggagaagt gcgcgcacaa gtgcccgtcg
     7501 atgtcgccac cttcctgctg aacgaaaaac gcgccgagct gtttgcgatg gaagagcgtt
     7561 tggatgtcaa cgtcgtcctg attccgaaca tccacctcga aaatccgcac tacgaaatca
     7621 accgcatccg caccgacgac gtagaagaag acggcgaacc gagctacaaa cgcgtcgccg
     7681 agccggaaga agacgaatcc gccaaaccgt tcggcggcga aaaagccaaa gccgcccgtc
     7741 ccgaacccgc cgtcaaaggc gtgcgccaca ccagccccgc cccgactgcc gcccccgaga
     7801 aaaaaacctc ttggtgggac agcttcaaag catggctcaa acgcattttc ggcggcagcg
     7861 aaacccaagc cgcgcccgct gccgaaacct ccgaaaaacg cagcacggca aaccgcagcg
     7921 gcagccgcgc caacaaccgc cgccaaaacc cgcgccgcag caaacgcgaa ggcagcaaag
     7981 tagaagtccg cgaagtggca ggcaaaactg ccggacagga agcgcgtgcc gacaaagccg
     8041 aaacgcgcaa caacggcaac cgccgccgca atgaacgcgg cgaccgtgcc gccgaacgcg
     8101 ccaacgaagc ggaaatccaa agccgcaacg tacagcctgc cgcaaccgtt gcagatgccg
     8161 caccgtccga aaccgaaatg caaaccggca aacgccgccg caacggcagc cgcagcgaac
     8221 gcagccaaac cgcgccggaa accgccgccg ttgccgaaac agccgttcag acagcggaaa
     8281 acacgccgtc cgaaccgcat accgcagaag acaaaggcag caagcccaaa tccgaacgca
     8341 accgccgcga acgcgacagc cgcgacgcca aagaacgccg cgagcgcaac aatcagcgcg
     8401 accgccgtca aaacggcaaa aaacgcaata tcccgtctgc cgccaaaatc gagcagtacc
     8461 tgaatattca cgacaccgcc gacaaagtcc gttccgccgc cgcgcacgtt ttcggcgaaa
     8521 ccgacgcaaa cgcgccgatt accgtcagca ttgccgatcc ggttgcagaa agggatcttc
     8581 cgacagcatc tcccgccgtt tcaaacggcg acgcaccggt ttatgatgcg gcggaaaaaa
     8641 tccgccgtgc caccgccgcc atcctgcccg aaggcgcgac accgaaagcc gaagcacagg
     8701 aaatgccgtc tgaaaccgca acctttacgg ctgcggcgga acaggcacgg gaaaccgcac
     8761 aaaccggcgg actcgtcctg atcgaaaccg accctgccgc attgaaggca tgggcggcac
     8821 aacccgaagt ccaaaccgga cgcggtttgc gccgttccga acagcccaag ccgtctgaag
     8881 tcgcaaccgt ccctgccgaa gaaatgatcc aagtcgaaac ccggcaaggc tgaaccgacg
     8941 gcggcaaaaa gaggttctgt tccgcagaac ctctttttta tatagattcg gatacctgca
     9001 atgccgtctg aagcctcacc attcccatga ttaccgcaac ctttcgtcat tcccgtgaaa
     9061 acgggaatct agaacctcaa actttcaaat aacctttgaa tattgccgct gccttaaggt
     9121 ctggattccc acctgcgcgg aatgacggtt tagaagttgc ccgaaacctc aaaaaaaact
     9181 gaaaccgaac aagccggatt cccgcaacat tccgtcattc ccgtgaaaac gggaatatag
     9241 aaccccaaac tttcagataa tctttgaata ttgccgtcgc ccaaaggcct ggattcccgc
     9301 ctgcgtggga atgacggcgg agggtggacg atgccgtctg aaacttcgcc attcccatga
     9361 ttaccgcaac ctttcgtcat tcccgccacc tttcgtcatt cccgtgaaaa cgggaatata
     9421 gaacctcaaa ctttcagata atctttgaat attgccgccg cccaaaggtc tggattcccg
     9481 cctgcgcggg aatgacggcg gagggtgaac gatgccgtct gaaacttcac cattcccatg
     9541 attaccgcaa cctttcgtca ttcccgtgaa aacgggaatc tagaacctct aaactttcag
     9601 ataatctttg aatattgccg tcgcccaaag gcctggattc ccgcctgcgc gggaatgacg
     9661 gtttagaagt tgcccgaaac ctcaaa
//
LOCUS       DAWITQ010000068         9525 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.068, whole genome shotgun sequence.
ACCESSION   DAWITQ010000068 DAWITQ010000000
VERSION     DAWITQ010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9525)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9525)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9525
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.068"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(1067..1735)
                     /locus_tag="WIX18_001227"
     CDS             complement(1067..1735)
                     /locus_tag="WIX18_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ5238336.1"
                     /translation="MKNLAIFDLDNTLINTDSDHAWPQYLIKKGLVDAAETEAQNEKF
                     YRDYQNGCLDIDAFLKFHLAPLARYSKEELAEFHREFMAEYIIPHISPMQRMLVQSHQ
                     MAGDETLVISSTNEFIITPVCRLFGITNIIGTQLESGSDGRYTGNYIGTPSLKEGKIT
                     RLNQWLAERGETLESYGKTYFYSDSKNDLPLLRLVDEPVAVNPDAELEKEAKEKGWPV
                     LNFK"
     gene            complement(1732..2400)
                     /gene="hda"
                     /locus_tag="WIX18_001228"
     CDS             complement(1732..2400)
                     /gene="hda"
                     /locus_tag="WIX18_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA regulatory inactivator Hda"
                     /protein_id="HEZ5238337.1"
                     /translation="MNQLIFDFAAHDYPSFDKFLGTENAELVYVLRHKHGQFIYVWGE
                     EGAGKSHLLQAWVAQALEAGKNAAYIDAASMPLTDAAFEAEYLAVDQVEKLGNEEQAL
                     LFSIFNRFRNSGKGFLLLGSEYTPQQLVIREDLRTRMAYCLVYEVKPLTDQEKIDALA
                     SMAAARQVTVDSEIFEYLLKHWRRDMDSLMMMLDTLDNYAVTMGKRITLPLLRQLLKQ
                     QETQ"
     gene            complement(2505..3056)
                     /locus_tag="WIX18_001229"
     CDS             complement(2505..3056)
                     /locus_tag="WIX18_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEZ5238338.1"
                     /translation="MSGININLKNGDSLLIRGPSGCGKTSLLRALAGLWPFGSSGKVS
                     RPPHQDILSLPQRPYTAQGSLRDAVCYPDIDKQHPELAEAMNTCRLGYLVDKLDKTDD
                     WQHKLSPGELQRVAFVRALLSKPKIVLLDEATAALDEPTEALLYRALKQKLPDSIIIS
                     IGHRSTLNAFHNMHLDVGNAACG"
     gene            complement(3305..3760)
                     /locus_tag="WIX18_001230"
     CDS             complement(3305..3760)
                     /locus_tag="WIX18_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ5238339.1"
                     /translation="MESPTLWAIVDLSEFVFVPRYNVAAAAGYGAPVFGEEPLFCLAF
                     RKYWIDNYVTKQPEKLSVITVKGDSMEGVLNHGDSILINHAETDPRDGLYVLRIGNDL
                     FVKRVQRIPGKLLVTSENPRYAPFEIDLSNAQDDIAIIGRVEWYGRSID"
     gene            4244..4447
                     /locus_tag="WIX18_001231"
     CDS             4244..4447
                     /locus_tag="WIX18_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEZ5238340.1"
                     /translation="MKKKQESMTDWHRADIVARLKKAGWSVRALSIEANLAPNTLGKA
                     LDAPYLKGERIIAAAIGVPAEEI"
     gene            4569..6557
                     /locus_tag="WIX18_001232"
     CDS             4569..6557
                     /locus_tag="WIX18_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ5238341.1"
                     /translation="MKISASDIAKLGIPSLPTDRQGIEYHAKKNNWQHCFEQKGRGRP
                     KKLYEIASLPAEIRAAIMKRQSDELAEKMPKMLPQVRPGTAMSAQALAEAAKLLNEKQ
                     RSVADARCAVVAAVLGIKYEYDCSAKAAVAQFLGLLAEGKLDAVTLGNLEKANDRSRS
                     AKVGERTLDGWISAYLKAENAIERLVALAPKTTKAVKPIESYGWLPMFMRFHNIPSAP
                     KLAHSYRRFVQWAEAENMPVNDVPNLSMVRRVWDKLPLIMQERGRKTGAAYKSLLPYV
                     KRDWGALKPNDVWIGDGHSFKAKVAHPVHGRPFKPEVTVIIDGCTRFVVGFSVSLAES
                     CVAVSDALRIGVKHFGLPIIYYSDNGGGQTGKTIDHEITGITSRLGIRHETGIAGNPQ
                     GRGIIERWWKDNLIEMARQYETFAGAGMDSSTKNLMYRKMESAFNALEKGKDLTEEQQ
                     KYLKKLPSWSRFIADVVKCIDDYNNRPHGELPRHPDGGHYSPKAYREIRLEQDGIAPD
                     MLSAEELATMFMPQEVRKVQRGWLDLFSNSYFSTELAEYHKDEVRVSYDLSDASAVNV
                     FDMDGKFITKAQANGNTREAFPTARIDQLAEKRRKGKIKRAENAIKLANAEVNPALEQ
                     AAAWDELGHLGGNVIEAEYAVLPKTGTDDGIFLFEADM"
     gene            complement(6624..6881)
                     /locus_tag="WIX18_001233"
     CDS             complement(6624..6881)
                     /locus_tag="WIX18_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEZ5238342.1"
                     /translation="MKEFPDLEKRLIMLEVAVQDLEERSLTDSFVLAWLLQRITRQEP
                     TSIEQVRSFLQAQAKTFEPDSVQREHLESLLEIVESAQGLA"
     gene            6927..8099
                     /locus_tag="WIX18_001234"
     CDS             6927..8099
                     /locus_tag="WIX18_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEZ5238343.1"
                     /translation="MKQINQALQQKLVEFKEKSGMNQTQLARGIDTSPASISMYLNGT
                     YAEKGGNYETIETKIEAFLEMQKSKARREELVLGFVATKTTRRIAEVMRNAHEGGETV
                     VIYGQAGLGKTQAVKNYCEKNPAAILIEANPSFTALVLMRKLATAAKVSAMGSLNDLF
                     ESVSDRLRDSGRLIVVDEAENLPLRALEIIRRLHDETGCGLVLSGMPRLVANLRGKHG
                     ELVQLYSRVSVALNLGESLPDDELFEIAKAALPDAVKHLLPDSVQALITVIGFNETLE
                     LVRLMGGTTYPLRQGYTKNSQSRVAYLEEIIGSEAAGRLVEAMAPCNLFIPRCETALY
                     ELRNRKIRSQFDRQTAGGTPAYEAVNDLALAHRLSDRHVWRILKQADKEAEQENLF"
     gene            8101..8622
                     /locus_tag="WIX18_001235"
     CDS             8101..8622
                     /locus_tag="WIX18_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238344.1"
                     /translation="MECHADVWHFILEKNMKKFYFVLLALGLAACGQEQSQKADAEQY
                     FFANKYQFADEKQAFYFERAARFRVLQQGLGGDFERFLKGEIPNQENLAKYRENITQA
                     VAYYADTNGDDDPYRVCKQAAQDAEILMKSMVTSGGGGTTDLDKESYQNYRKSMQECR
                     KTITEAEANLPKK"
     gene            8765..9310
                     /locus_tag="WIX18_001236"
     CDS             8765..9310
                     /locus_tag="WIX18_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEZ5238345.1"
                     /translation="MSKIICLTAGHSNTDPGAVNGSDREADLAQDMRNIVASILRNDY
                     GLTVRTDGEGKGNMPLRDAVKLIRGSDVAIEFHTNAAANKTATGIEALSTPKNKRWCQ
                     VLGKAVAKKTGWKLRGEDGFKPDNAGQHSRLAYAQAGGIVFEPFFISNDTDLALFKTT
                     KWGICRAIADAIAMELGATKV"
     gene            9307..9510
                     /locus_tag="WIX18_001237"
     CDS             9307..9510
                     /locus_tag="WIX18_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238346.1"
                     /translation="MKKSLIALCVAHCAKLKNDFGVPPLPEIKITPSPVRVGSLKQHP
                     SLRLGKSGVAAAKRAARKRKNRH"
BASE COUNT         2487 a         1988 c         2645 g         2405 t
ORIGIN      
        1 gtcgccttgt cctgattttt gttaatccac tatacgtcct agattcccac tttcgtggga
       61 atgacgggat gtgggttttt gtgcggattt gaaccggtaa gggtggtgtg ggattggtgg
      121 tttgcttagg atcttttgga ttgtattttg tatatacatt tacttgttga taaaagataa
      181 aataaaatta gaaactaaaa gtgagaaaaa attaataata atagggatgt ataaatgtaa
      241 aggctccgtt tcatagctaa ggttatctga atatatggaa aaaaagtaaa agtccataaa
      301 actaaaatat atagataatg ctaataataa tagaattatc actttcctag agtaaggata
      361 atattttttt atcgtaaaaa aatataaaat aggataaata attgccatat agatagattt
      421 tgtaacaaaa ttaaaaataa ataataaaaa taatgtaata aagtatattt tttggctatg
      481 aaataaaatt gtacataatt gaacgagcag atcaaaaaat gaactacata taacaataaa
      541 taataacgta tttaccataa taaatttaat aggtctcatt atcatattta ataaccactt
      601 catagtatag tggattaaat ttaaaccagt acagcgttgc ctcgccttgc cgtactatct
      661 gtactgtctg cggctttgtc gccttgtcct gatttttgtt aatccactat aaatgcagag
      721 tgggtggaaa cactcacttt atggtttgct acgctctgct caattagcaa cccgataacc
      781 caatatggat aatagggtaa ttaatccaat ctaatttgtc agtatccgtt aatttattgc
      841 aaaataaagt attgaattat gtcgggtgca aatgacgaaa tataagtttc cgtgcggacg
      901 gatcaagatt cccactttcg tgggaatgac ggtggaaaga ttgttgtttt tcccgatgaa
      961 ttcctgtgtt ttttgttttt ccggataaat tcctgtggct ttgagttttt tggatttcag
     1021 cctcaatgcc gtctgaacgc cgaatcgggc ttcagacggc attgcgtcat ttgaaattca
     1081 aaaccggcca gcctttttct ttggcttctt tttccagctc ggcatcgggg ttgacggcga
     1141 cgggttcgtc gacgaggcgc agcagcggca ggtcgttttt ggagtcgctg taaaaatagg
     1201 ttttgccgta gctttcgagc gtttcgccgc gttcggcgag ccattggttc aggcgggtga
     1261 ttttaccttc tttgaggctg ggcgtgccga tgtaattgcc ggtgtagcgg ccgtcggaac
     1321 cggattcgag ttgtgtgccg atgatgttgg taatgccgaa aaggcggcag acgggggtga
     1381 tgatgaactc gttggtcgat gagatgacga gggtttcgtc gcctgccatt tggtggctct
     1441 gcaccagcat acgctgcata ggcgagatgt gggggatgat gtattccgcc ataaattcgc
     1501 ggtgaaactc tgccagctct tctttgctgt aacgagcgag cggggcaagg tggaatttga
     1561 ggaatgcgtc gatgtcgagg caaccgtttt ggtagtcgcg gtagaatttt tcgttttgcg
     1621 cttcggtttc ggcagcgtca accaagcctt ttttgatgag gtattgcggc caggcgtggt
     1681 cggaatcggt gttgatgagg gtgttgtcga ggtcgaagat ggcgaggttt ttcattgggt
     1741 ttcctgttgt ttcaaaagct ggcgcaaaag cggcagggtg atgcgtttgc ccattgtgac
     1801 ggcgtagttg tccagcgtgt cgagcatcat catcaggctg tccatatcgc gccgccagtg
     1861 tttgagcagg tattcgaaaa tttcggaatc gacggttact tggcgtgccg ccgccatact
     1921 ggcgagcgcg tcgatttttt cttggtcggt taagggtttg acttcgtaaa cgaggcagta
     1981 cgccatacgc gtccgcaaat cttcgcggat gacaagctgc tggggcgtgt attccgaacc
     2041 gagcagcaaa aagcctttgc cgctgttgcg gaagcggttg aagatggaaa aaagcagggc
     2101 ttgttcttcg ttgcccagtt tttcgacttg atcgacggcg aggtattccg cctcgaacgc
     2161 ggcatcggtc agcggcatgg aggcggcatc gatataggcg gcgtttttgc cggcttcgag
     2221 cgcctgtgcg acccacgcct gcaaaagatg gcttttgccc gcgccttctt cgccccaaac
     2281 atagataaac tgtccgtgtt tgtgtcggag gacatagacc agttccgcgt tttccgtgcc
     2341 gaggaatttg tcgaaactcg gatagtcgtg tgcggcaaag tcgaaaataa gctggttcac
     2401 ggttcggcat tccgaggggt ggtaaacggg tttattgtac gttgttttcg cgcgcctttc
     2461 caatttgaac gatgccgtct gaaaacggct tcagacggca tcgttcagcc gcaggcagcg
     2521 ttgccgacat cgaggtgcat attgtggaac gcgttgagcg tgctgcggtg gccgatgctg
     2581 atgatgatgc tgtcgggcag tttttgtttc agtgcgcggt agagcagggc ctcggtcggt
     2641 tcgtccaaag cggcggtggc ttcgtcgagc aggacgattt tgggcttgga aagcagggcg
     2701 cggacgaagg cgacgcgttg cagttcgccc ggggagagtt tgtgttgcca gtcgtcggtt
     2761 ttatctaatt tatcaaccag ataacccaag cggcaggtgt tcatggcttc ggctaactcg
     2821 ggatgctgct tgtcaatgtc ggggtaacaa accgcgtcgc gcaggctgcc ctgtgccgtg
     2881 tacgggcgtt gcggcaggga gaggatgtct tgatgcggcg gacggctgac tttgccgctg
     2941 ctgccgaacg gccaaagccc cgccagcgcg cgcaacagcg aggttttgcc gcaaccgctc
     3001 gggccgcgta tcagcaggga atcgccgttt ttgaggttta tgttgatgcc gctcaacagg
     3061 atttcgccgt tgtggcagaa cagagcgacg ttttcctgtg ggggactgtt agtttttgca
     3121 caaggaacaa atagagtaaa aaaacgctga aatcttcgga agacgtggat ttcggcgttt
     3181 ttttgtatcc ggaaaagtta cgccagcttt ttcacaaaac cgcgccggaa tgcgcggttt
     3241 tctgtttaaa gctgacgaga ttagggaatt tttaaaactg ttttaagagg tttttaaaat
     3301 ggatttaatc aatactccgg ccataccact caacacggcc tatgatggcg atgtcgtctt
     3361 gggcattgct caaatctatt tcaaacggtg cgtaacgtgg attttcagac gttacaagca
     3421 gtttgcccgg tatacgttgc acacgtttga caaagaggtc attgcctata cgcaagacat
     3481 ataggccgtc acgcgggtca gtttcggcgt ggttgatgag aatggaatcc ccatgattga
     3541 gcacgccctc cattgaatcg cctttaacgg taattacaga cagtttttcc ggctgtttgg
     3601 tcacatagtt gtcaatccaa tatttccgga aagccaagca gaataaaggt tcttcgccga
     3661 agactggtgc gccataccct gctgctgcgg ctacgttgta gcgcggcacg aatacaaact
     3721 cggacaggtc gacgattgcc catagtgtcg gtgattccat cagaatttct acttacagag
     3781 aatgctccgg cgttttccgg cctggcttta tcgagatacg gcaagccttt tccggtcagc
     3841 agccagttta aatcacaacc ggtaacttct tgaattttta ctaggtaatc ggctgttggg
     3901 atagctccct ctttccaaac tctattaaat ccagaagccg acatttctat tttgttatag
     3961 atgtcagatg gcttagcccc atgaggccaa agaaatttga gcctatctaa aaaagtatcc
     4021 atagtaatcc taatttaact catttaagca aaacattaag caaaaaaaga aactcttttg
     4081 cttaaataag attactcaaa taatcaatat tttgtaaaaa taattacgtt tttgagaaaa
     4141 tattttagca aaagagtttc atgaagctgt tttgctaaat gtaattcact catttgctaa
     4201 atgacggcgg ttaataaacc tacttaatta aggaattgcg agaatgaaaa aaaagcaaga
     4261 aagcatgact gattggcatc gtgctgacat tgtggctcgt cttaaaaagg caggctggtc
     4321 tgtgagagcg ttatctatcg aggctaattt agcaccaaat acattaggga aagctttaga
     4381 tgctccttat ctgaaaggcg aaagaatcat tgcagcagcg attggagtac ccgcagaaga
     4441 aatctagcca tctcgttttg agaaacgaaa ccataagcca accttcccaa gatctataaa
     4501 tagataactg ttttgctaaa tagttccaaa agagtaccgc atttaagcaa aaatagaaag
     4561 cggaaaaaat gaaaatatct gcatctgata ttgcgaaatt aggaattccg agcctaccaa
     4621 ctgatagaca agggattgaa taccatgcca agaaaaataa ttggcaacac tgttttgagc
     4681 aaaaaggaag aggccgtcct aaaaaactgt atgaaatcgc ttccctccct gccgaaatcc
     4741 gagcagccat catgaaacgg cagtcggacg agctggcgga gaagatgccg aaaatgctgc
     4801 cccaagtcag accggggacg gcgatgtcgg ctcaggcact ggctgaagcg gccaagctgt
     4861 tgaacgagaa acaacggtcg gtggcggatg cgcgatgtgc ggtggtggcg gcggtattgg
     4921 ggattaaata cgaatacgat tgctctgcca aggctgcggt ggctcagttt ttgggcttgc
     4981 tggcagaagg taaattggac gcggtcacgc ttgggaactt ggaaaaggcc aatgaccgca
     5041 gccggtcggc gaaggttggc gaacgtactt tagacggctg gatttctgct tatttgaaag
     5101 cggaaaacgc gatagagcgg ttggttgctt tggctccgaa gacgacgaag gcggtcaagc
     5161 cgattgagag ctacggttgg ttgccgatgt ttatgcggtt tcacaacatc ccttcggctc
     5221 cgaaactggc gcacagctac cgccggtttg tgcagtgggc ggaagcggaa aatatgccgg
     5281 tcaatgatgt gcctaatttg agtatggtgc ggcgcgtttg ggacaagctc ccgctaatta
     5341 tgcaggagcg cggcaggaaa acgggggcgg cttataaatc gctgctgcct tatgtgaaac
     5401 gtgattgggg ggctttgaag ccgaacgatg tttggatcgg cgacggccac agctttaagg
     5461 cgaaggtggc acaccctgta cacggcaggc cgtttaagcc ggaagtgacg gtgattattg
     5521 atggttgtac gcggtttgtg gtcgggtttt cggtttcgtt ggctgaaagt tgtgtggcgg
     5581 tatcggatgc tctgcgtatc ggggtcaagc attttggttt gccgattatc tattactcgg
     5641 ataacggcgg cggccaaacc ggcaagacga tagaccatga aatcacgggt attacgtccc
     5701 gactgggtat ccgccatgaa acgggtatcg cgggcaaccc gcaaggtcga ggcatcatcg
     5761 agcgatggtg gaaagacaat ctgattgaga tggcgcgcca gtatgagacg tttgcgggcg
     5821 caggaatgga cagtagcacg aagaatctga tgtaccgcaa gatggaaagt gcgtttaacg
     5881 ctttggaaaa aggcaaggat ttaacggagg aacagcaaaa atatttgaaa aaactgccga
     5941 gctggtcgcg ttttatcgcg gatgtggtca agtgtatcga tgattacaac aaccgtccgc
     6001 acggcgagct gccccgacat ccggacggcg ggcattattc gccgaaggct tatcgggaaa
     6061 taaggctgga acaggacggt atcgcgccgg atatgttgtc ggcggaagag ctggcgacga
     6121 tgtttatgcc gcaggaagtg cgaaaggtac agcgcggttg gctggatttg ttcagcaact
     6181 cttatttctc aaccgagctg gcggagtatc acaaagacga ggtacgggtc agctacgatt
     6241 tgagcgatgc gtcggcggtc aatgtgtttg atatggacgg caagtttatt actaaggcgc
     6301 aggccaacgg caatacccgc gaggctttcc cgacagcgcg tatcgaccaa ctggcggaaa
     6361 aacgccgaaa aggcaaaatc aagcgggcgg aaaatgcaat caagctcgcg aatgcggaag
     6421 tcaatccggc actggaacag gcggcagctt gggacgagct gggacatttg ggcggaaacg
     6481 tcatcgaggc ggagtatgcg gtattgccga aaacgggcac ggacgacggg attttcttgt
     6541 ttgaggcgga tatgtaaagg aaaacatgat ggaaaaacag aaaaatgcgg cgttttcggc
     6601 cgagcttgtt gaaaaattga aactcaagcg agcccttggg cggattcaac gatttcaagc
     6661 aaagattcaa ggtgttcccg ctgaacggaa tcaggctcaa acgtttttgc ctgcgcttga
     6721 aggaaactgc gaacctgctc aatcgaagtc ggctcttgac gggtaatccg ctggagcagc
     6781 caggcaagta cgaaggaatc ggtaagcgac ctttcttcca agtcttgaac ggcgacttcc
     6841 agcatgatca ggcgtttttc caaatcggga aactctttca tttcagacgg cctttaaagg
     6901 ttgtttaaaa ctcaaggata ttaaaaatga aacaaattaa tcaagcatta caacaaaaac
     6961 tggttgaatt taaagaaaaa tcgggtatga accaaaccca actggcacgc ggtatcgata
     7021 cttcgccggc atccatcagt atgtatctga acggcactta tgcggaaaaa ggcggcaatt
     7081 atgaaaccat cgagacgaaa atcgaggcgt ttttggagat gcagaaaagt aaggcgcgac
     7141 gcgaagaact ggtgttgggt tttgtagcga ctaagacgac ccgccgaatc gcggaagtga
     7201 tgcgcaatgc gcacgaaggc ggcgaaacag tggtgatcta cggtcaggcg ggattgggaa
     7261 agactcaggc ggtcaaaaac tactgcgaga aaaacccagc ggccatcttg attgaggcta
     7321 atccgagctt tacggctttg gtcttgatgc gcaagttggc gacggcggcg aaggtatcgg
     7381 cgatgggcag cctgaatgat ttgtttgagt ctgtatctga ccgcctgcgc gattcgggcc
     7441 gtctgattgt ggtcgatgaa gcggaaaacc tgcccttgcg cgcccttgag attatccgcc
     7501 gactgcatga tgaaacgggc tgcggcttgg tgttgagcgg tatgccccga ctggtggcca
     7561 acctgcgcgg taagcatggc gagctggtgc aactttatag ccgcgtgtct gttgcgctga
     7621 atttgggcga atctttgccg gatgacgagc tctttgagat tgcgaaagcg gctttgcctg
     7681 atgcggtcaa gcatctgctc cctgatagtg tacaagcgtt gattacggtc atcgggttta
     7741 atgaaacgct ggagctggtg cgcctgatgg gcggtacgac ttatcctttg cggcagggtt
     7801 atacgaaaaa cagtcaatcc cgtgttgcat acttggaaga gattatcggc agtgaggcgg
     7861 ccggtcggct ggtggaggca atggctccgt gcaatctgtt tataccccgt tgcgagacgg
     7921 ccttgtatga gttgcgaaac cgtaaaatcc gcagtcagtt tgaccggcag acggcaggcg
     7981 gtacccctgc ttatgaggcc gttaacgatt tggccttggc acaccgccta agcgaccgcc
     8041 atgtgtggcg aattttaaag caggcggata aggaagcgga gcaggagaat ttgttttaga
     8101 atggaatgcc atgcagatgt atggcatttt attttggaga aaaatatgaa aaagttttat
     8161 tttgtgctgc tggcgttggg tttggcagcg tgtgggcaag aacaatcgca gaaagctgat
     8221 gcggagcagt atttttttgc caataaatat caatttgcag atgagaaaca ggctttttat
     8281 tttgaacgcg ccgcccgttt ccgtgtattg caacaaggcc ttggcgggga ttttgagagg
     8341 tttttaaaag gagaaatacc taatcaagaa aatcttgcaa agtatcgtga aaatattact
     8401 caagcagtcg cttattatgc ggacacgaat ggagatgatg acccataccg cgtctgcaaa
     8461 caggctgcgc aagatgcaga aatcctgatg aagagtatgg taacaagcgg tggaggcggt
     8521 acaactgatt tagataagga aagttatcaa aattaccgaa aatcaatgca agaatgccgt
     8581 aaaacaataa cggaagctga agccaatttg ccgaaaaaat aaaataaacg attctaaggc
     8641 cgtctgaaca acaggcggct tttttgttgc ctactgacac tgtttcgccc gctgcaaaag
     8701 ccatgccgtt tgaaaatgta agcctctgaa agtgcatttt aatctgattt tgagggaggc
     8761 tttaatgagc aaaattattt gtctgactgc cggacacagt aacaccgacc cgggcgcagt
     8821 caacggcagc gaccgtgagg cggacttggc gcaggatatg cgcaacattg tggcttcaat
     8881 cctgcgtaac gattacggcc tgaccgtacg caccgacggc gaaggcaaag gcaatatgcc
     8941 cttgcgcgat gcggtcaagc tgattcgcgg ctcggatgtg gcgattgagt tccacaccaa
     9001 tgcggcggcg aacaaaacgg cgacaggcat cgaagccttg tccacgccga aaaataaacg
     9061 ctggtgtcag gtgctgggca aagccgttgc caagaaaacc ggctggaaac tgcgcggcga
     9121 agacggcttt aagccggata acgcagggca acattcgcgc ctggcttatg cgcaggcagg
     9181 cggcattgtg tttgagccgt tttttatcag taacgacact gatttggcct tgtttaagac
     9241 gaccaaatgg ggcatctgcc gcgcgattgc ggacgcgatc gcgatggaat tgggagcgac
     9301 gaaggtatga aaaagtcttt gattgcttta tgtgttgccc attgtgcaaa gttgaaaaac
     9361 gattttggcg taccaccgtt acctgaaatc aaaatcacgc caagccctgt tcgggtaggc
     9421 tctttgaaac aacatccgag cctgcgcttg ggtaaatcag gcgtggcagc cgcgaaacgt
     9481 gcggcgcgca aacgcaagaa tcgtcattaa tcatgggaca ggttg
//
LOCUS       DAWITQ010000069         9464 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.069, whole genome shotgun sequence.
ACCESSION   DAWITQ010000069 DAWITQ010000000
VERSION     DAWITQ010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9464)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9464)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9464
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.069"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            278..1096
                     /gene="opc"
                     /locus_tag="WIX18_001238"
                     /gene_synonym="opcA"
     CDS             278..1096
                     /gene="opc"
                     /locus_tag="WIX18_001238"
                     /gene_synonym="opcA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin Opc"
                     /protein_id="HEZ5238347.1"
                     /translation="MKKTVFTYAMIALTGTAAAAQELQTANEFTVHTDLSSISSTRAF
                     LKEKHKAAKHIGVRADIPFDANQGIRLEAGFGRSKKNIINLETDENKLGKTKNVKLPT
                     GVPENRIDLYTGYTYTQTLSDSLNFRVGAGLGFESSKDSIKTTKHTLHSSRQSWLAKV
                     HADLLSQLGNGWYINPWSEVKFDLNSRYKLNTGVTNLKKDINQKTNGWGFGLGANIGK
                     KLGESASIEAGPFYKQRTYKESGEFSVTTTSGDVSLTIPKTSIREYGLRVGIKF"
     gene            1260..1904
                     /locus_tag="WIX18_001239"
     CDS             1260..1904
                     /locus_tag="WIX18_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEZ5238348.1"
                     /translation="MLASAIDFILHIDQHLLALSAQYGVWIYAILFLIVFCETGLIVT
                     PLLPGDSLLFAAGGIAALGGMDIHLMVALLSLAAILGDALNFTVGKYFGGRLFANPDS
                     KIFRREYLDKTRRFYEKHGGKTIIIARFVPIVRTFAPFVAGMGKMHYAKFIRYNIIGG
                     FLWVILFSYAGYFFANFPIVKNNLGLVMGGIIIISILPGAVEIARAKLAVKSKR"
     gene            1923..3833
                     /locus_tag="WIX18_001240"
     CDS             1923..3833
                     /locus_tag="WIX18_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEZ5238349.1"
                     /translation="MNILSVENASFAVGHVALLDKTSFQLDSGEKIGLIGRNGAGKSS
                     FLKILAGLQKLDDGQIIVQNNLKIVYVPQESFFDKDATVFDTVAEGLGKIRDLLRRYH
                     RVGHELENGSGEALLKELNELQLEIEAKDGWKLDAAVKQTLGELGLPENEKIGNLSGG
                     QKKRVALAQAWVQKPDVLLLDEPTNHLDIDAIIWLENLLKAFEGSLVVITHDRRFLDN
                     IATRIVELDRGILRSYPGSFSKYSEKKAQELAVEAEHNRLFDKFHAQEEAWIRKGIEA
                     RRTRNEGRVRRLEELRRQRAERRNVQGQVNFKLDSGEKSGKIIAELEHTSFAYGGKVI
                     MDKFSAILQRGDKIGLIGPNGIGKTTFLKLILGELQPTYGRIRIGSKQEVAYFDQFRS
                     ALNENETVFYTLGQGNDYVEVGGKKKHVMSYLEDFLFPPARAQSPVSSLSGGERNRLL
                     LAKLFTRPANILVLDEPTNDLDIDTQELLEDLLRDYQGTVFLVSHDRMFLDNVITQSL
                     VFEGNGRLKEYIGGYQDYIDAKSREAKIQTESAPKTADAEPVKEKPKANRTVKLSYKE
                     QRELDALPDEIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERW
                     ELLETKQNGNAV"
     gene            3854..4219
                     /locus_tag="WIX18_001241"
     CDS             3854..4219
                     /locus_tag="WIX18_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238350.1"
                     /translation="MFKRPEEIIVLILAVLWIAGTYFLAALFGADAYTVLKITALTLL
                     WSAASFLLWQKNLSRHIWPLLLGCLTACWWPYLNQSVAPGSLPWYASWTFKTILALIP
                     VTAGYLFKWKQYRQRKTKP"
     gene            4330..5805
                     /locus_tag="WIX18_001242"
     CDS             4330..5805
                     /locus_tag="WIX18_001242"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HEZ5238351.1"
                     /translation="MISKQEYQAQAAQGYNRIPLVQELLADLDTPLSLYLKLANRPYT
                     YLLESVVGGERFGRYSFIGLPCSHYLKASGKHVDVYQNGEIVEQHDGNPLPFIEAFHN
                     RFKTPEIPSLPRFTGGLVGYFGYETIYNFEHFAHRLKNTTKADPLGTPDILLMLSQEL
                     AVIDNLSGKIHLVVYADPSQPDGYERARERLEDIRTQLRQSCAIPLSLGSKHTEAVSE
                     FGEEPFKACVNKIKDYIFAGDCMQVVPSQRMSMEFTDSPLALYRALRTLNPSPYLFYY
                     DFGDFHIVGSSPEILVRRERNDVIVRPIAGTRLRGKTPAEDLANEQDLLSDAKEIAEH
                     VMLIDLGRNDVGRISKTGEVKVTDKMVIEKYSHVMHIVSNVEGRLKDGMTNMDILAAT
                     FPAGTLSGAPKVRAMEIIEEVEPSKRGIYGGAVGVWGFNNDMDLAIAIRTAVVKNNTL
                     YVQSGAGVVADSDPASEWQETQNKARAVIHAAQMVQEGLDK"
     gene            5802..6348
                     /locus_tag="WIX18_001243"
                     /pseudo
     CDS             5802..6348
                     /locus_tag="WIX18_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242626.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1643 domain-containing protein"
     gene            6345..7481
                     /locus_tag="WIX18_001244"
     CDS             6345..7481
                     /locus_tag="WIX18_001244"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HEZ5238352.1"
                     /translation="MKNISLSPPATLGILGGGQLGRMFTVAAKTMGYKVTVLDPDPNA
                     PAAEFADRHLCAPFNDQTALDELAKCAAVTTEFENVNADAMRFLAKHTNVSPSGDCVA
                     IAQNRIQEKAWIRKAGLQTAPYQAVCKAEDITEASAQFLPGILKTATLGYDGKGQIRV
                     KTVDELKAAFAEHGGVDCVLEKMVDLRGEISVIVCRLNNDNVQTFDPAENIHENGILA
                     YSIVPARLSADIQQQARQMAQRLADELNYVGVLAVEMFVVGDTHELVVNEIAPRPHNS
                     GHHTVDACAADQFQQQVRLMCNLPPADTKLLSSCCMANILGDVWQEDGGEPDWFPLQS
                     RPDAHLHLYGKKTAHKGRKMGHFTVLTTDSDTAFQEAKKLHQSL"
     gene            7528..8010
                     /locus_tag="WIX18_001245"
     CDS             7528..8010
                     /locus_tag="WIX18_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ5238353.1"
                     /translation="MNLLTLLRPATVQDCKDIFKVHLHSVQYTCILSYNEHALKVWEG
                     LLNTESYLPTISDPDKALWVAEYKGNIQGFFQIDCQEAQLDALYVHPLFHNLGLGTAL
                     LHQAETIAHKSGLSFLKLYASLNSVPFYLLNRYESLGSAVLQLDPSIKIKCELMRKHL
                     "
     gene            8116..9171
                     /locus_tag="WIX18_001246"
     CDS             8116..9171
                     /locus_tag="WIX18_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ5238354.1"
                     /translation="MKTYAPALYTAALLTACSPAADSNHPSGQNAPANTESDGKNITL
                     LNASYDVARDFYKEYNPLFIKTYQSEHPGTSVSIQQSHGGSSKQALSVANGLQADVVT
                     MNQSSDIDLLEKKGLVEKGWQQALPDHAAPYTSTMVFLVRKNNPKQIRDWNDLAKDGV
                     NIVIANPKTSGNGRYAFLGAYGYGLKATNGNEQEAQKLVASILKNTPVFENGGRAATT
                     TFTQRNIGDVLITFENEANYVSKKLTQGQFEIVYPSYTISAESPVAVVNSVVAKKGTQ
                     KTARAYLEYLWSEPAQELAASLYLRPRNPEVLARHKADFPDLDTFSPEEKFGGWDNIM
                     KTYFADGGIFDRLTAQK"
     gene            9168..9365
                     /locus_tag="WIX18_001247"
     CDS             9168..9365
                     /locus_tag="WIX18_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238355.1"
                     /translation="MTAMPSEPPFRRHSTHQNRKTAPKIIITRHNGKPDTKPNTAAKM
                     PSEAVGATILIWGITFLNHPF"
BASE COUNT         2636 a         2685 c         2084 g         2059 t
ORIGIN      
        1 ccgtgttggg ttctagattc ccgcctgagc gggaatgacg gcggcgggtt tctgtttttc
       61 cgataaatac acacaaacta aaatttcgtc attcccataa aaaacagaaa accaagtgag
      121 aataacaatt cgttgtaaac aaataactat ttgttaattt ttattaatat atgtaaaatc
      181 ccccccccga aagcttaaga atataattgt aagcgtaacg attatttacg ttatgttacc
      241 atatccgact acaattcaaa ttttagaggt tttaactatg aaaaaaacag tttttacata
      301 tgccatgatc gccctgaccg gtactgccgc cgctgcacaa gagcttcaaa ccgctaatga
      361 gtttaccgtc cacaccgacc tctcttccat ttcttcaact cgtgctttcc tgaaagaaaa
      421 acacaaagct gccaaacaca tcggcgtgcg tgctgatatt ccttttgatg ccaaccaagg
      481 catccgcttg gaagccggtt tcgggcgcag caaaaaaaat attattaatt tggaaacaga
      541 tgagaacaag ctgggtaaga ctaaaaatgt aaaactgccc accggcgttc ctgaaaaccg
      601 tatcgatctt tacacaggct acacctacac ccaaacgtta agtgattctt taaatttccg
      661 tgtgggtgcc ggcttgggtt ttgaatcttc aaaagacagc attaaaacca ccaagcatac
      721 gcttcacagc agccgtcagt cgtggttagc caaagttcac gcggatttgc tttcccaact
      781 gggtaacggc tggtatatca acccttggtc tgaagtgaaa tttgacctca attcccgcta
      841 taaattaaac accggcgtta ccaatctcaa aaaagacatc aatcaaaaaa ccaacggctg
      901 gggctttgga ttgggtgcaa atattggtaa aaaactgggc gaatccgcca gcatcgaggc
      961 ggggccgttc tacaaacaac gcacttacaa agaatccggc gagtttagtg taacaaccac
     1021 gagtggcgac gtatcgctca ccatcccgaa aaccagtatt cgtgaatacg gcttgcgcgt
     1081 cggcataaaa ttctgatgat ttgaaatcat cattgtcgct ttaaatgcca aaccgcaaac
     1141 tattttggtt tgcggttttt acgtgaaatg aatttgaata gccgatgccg tctgaaactt
     1201 ttcagacggc atttttccaa tcggttaaaa tacgcggttt gtttttttag gaacgcaccg
     1261 tgcttgcctc cgccatcgac ttcatcctcc atatcgacca acacctgctc gcgctgtcgg
     1321 cgcaatacgg tgtgtggatt tatgcgattc tgtttttgat tgttttttgc gaaaccggcc
     1381 tgattgttac gcccttactg cccggcgatt cgctgctgtt tgccgccggc gggattgccg
     1441 cgctgggcgg tatggatatt catttgatgg ttgcattatt aagccttgcc gccatactcg
     1501 gcgacgcgct caattttact gtcggtaagt atttcggcgg caggctgttc gccaatcccg
     1561 attctaaaat cttccgacgc gaatatctcg ataaaacccg ccgtttttac gaaaaacacg
     1621 gcggcaaaac gattatcatc gcgcgcttcg tgcccatcgt ccgcaccttc gccccctttg
     1681 tcgccggcat gggcaaaatg cattatgcaa aatttatccg ctataacatc atcggcggct
     1741 tcttgtgggt tatcctgttt tcttatgcag gctatttctt tgccaacttc cccatcgtaa
     1801 aaaacaatct gggcttggtg atgggcggca tcattattat ttccatcctg ccgggtgcag
     1861 ttgaaattgc ccgcgccaaa cttgcggtaa aatccaaacg gtaactgttg agaatttgta
     1921 tcatgaatat attatccgta gaaaacgctt cctttgccgt cggccatgtc gccctgctcg
     1981 acaaaacgtc cttccaactc gacagcggcg aaaaaatcgg cttaatcgga cgcaacggtg
     2041 cgggtaagtc ttcgttttta aaaatcctcg ccggtttgca aaagctcgac gacgggcaga
     2101 ttattgttca aaacaacctc aaaatcgttt atgtaccgca ggaatccttt tttgataagg
     2161 acgcaaccgt atttgatacc gttgccgaag gtttgggtaa aattcgcgat ttattgcgcc
     2221 gttaccaccg cgtcggtcat gagttggaaa acggttcggg tgaggctttg ttgaaagaac
     2281 tcaacgaatt acaacttgaa atcgaagcga aggacggctg gaagctggat gcggcagtca
     2341 agcagacttt gggcgaactc ggtttgccgg aaaacgaaaa aatcggcaac ctttccggcg
     2401 gtcagaaaaa gcgtgtcgcc ttggcgcagg cttgggtgca gaagcccgac gtattgctgc
     2461 tggacgaacc gaccaaccat ttggatattg acgcgattat ctggttggaa aacctgctca
     2521 aggcgtttga aggcagcttg gtcgtgatta cccacgaccg ccgttttttg gataatatcg
     2581 ctacgcggat tgttgaactt gaccgcggca ttctacgttc ctatcccggc tcgttctcta
     2641 aatacagtga gaaaaaagcg caagagttgg cagtcgaggc ggaacataac cgcttgtttg
     2701 acaaatttca tgctcaggaa gaagcgtgga tacgcaaagg catcgaagcg cgacgtaccc
     2761 gtaacgaagg acgcgtgcgc cgtttggaag agctgcgccg ccaacgtgca gaacgccgca
     2821 acgtgcaggg acaggtcaac tttaagctcg atagcggtga gaaaagcggc aaaatcatcg
     2881 ccgaattgga acacacttcg tttgcctatg gcggcaaagt cattatggac aaattctccg
     2941 ccatcttgca gcgtggcgac aaaatcggct taatcggccc aaacggtatc ggcaaaacca
     3001 ccttcctcaa gctgattttg ggcgaattgc agccgaccta cggcagaatc cgtatcggca
     3061 gcaagcagga agtcgcctat ttcgaccagt tccgcagcgc gttgaatgaa aacgaaaccg
     3121 tgttttacac gctcggacag ggcaatgatt acgttgaagt cggcggtaag aaaaagcatg
     3181 tgatgagcta tttagaagat ttcctgttcc cccctgcccg cgcgcaaagt cctgtttctt
     3241 cactctccgg cggcgaacgc aaccgccttt tgctggcaaa actctttacc cgtcccgcca
     3301 atattttggt cttggacgaa ccgaccaatg acttggacat cgacacccaa gagctgctcg
     3361 aagacctgtt gcgcgattat caaggcacgg tattccttgt ctcgcacgac cgtatgttcc
     3421 tcgataacgt gattacccaa agccttgttt ttgaaggaaa tggaaggtta aaagaatata
     3481 tcggcggcta tcaggactac atcgacgcaa aatcacgcga agcgaagatt cagacggaat
     3541 ccgcacccaa aacagccgat gccgaaccgg tgaaagaaaa acccaaagcc aaccgcacgg
     3601 tcaaactgtc ctacaaagaa cagcgagaac tcgatgccct gcccgacgaa atcgccgcct
     3661 tggaagccga acaggcagaa atcaacgcgc agctttccga tcccgaaatc ttcaaagatt
     3721 acgaaaaagc cggcgcactg caaagccgcg ccgaagaaat cgaaatgctg cttttggaaa
     3781 agctggaacg ctgggagctg ctggaaacca aacagaacgg caatgccgtc tgaaatcaaa
     3841 caggaagaaa aaaatgttca aacgacctga agaaatcatc gtcctgatac ttgccgtcct
     3901 ctggattgcc ggtacgtatt ttctcgccgc cctgtttgga gcggacgctt ataccgtgtt
     3961 aaaaatcact gcccttaccc tgctttggtc tgccgcatca ttcctccttt ggcaaaaaaa
     4021 cctcagccgg catatctggc cgctgctgct cggctgcctg actgcctgtt ggtggccgta
     4081 tctgaatcaa tcggtcgcac ccggttcttt accttggtat gcatcatgga cgttcaaaac
     4141 catcttagcc ctgattcccg taaccgcagg ttatctgttt aaatggaaac aataccggca
     4201 gcgcaaaaca aagccgtaag cccgtctttt tcagacggca tctccggtca gactgtcaac
     4261 aattccgata aaatgctata ctcgcgcccg ttgccgcgcc gtccgaaacc gccctttggg
     4321 aaagcagaaa tgatcagcaa acaagaatac caagcccaag ccgcccaagg ctacaaccgc
     4381 atcccgctcg tgcaagaact ccttgccgat ttggatacgc cgctttccct ctatctcaaa
     4441 ctcgccaacc gcccctatac ctacctgctc gaatccgttg tcggtggcga acgtttcggc
     4501 cgctattctt ttatcggcct gccttgcagc cactatctca aagccagcgg caaacacgtc
     4561 gatgtttatc aaaacggcga aattgtcgag caacacgacg gcaaccccct gccctttatc
     4621 gaagccttcc acaaccgctt caaaacaccc gaaatcccaa gcctgccgcg ctttaccggc
     4681 ggactggtcg gctacttcgg ttacgaaacc atctacaatt ttgaacactt cgcccaccgc
     4741 ctgaaaaaca ccaccaaagc cgacccgctc ggcacgcccg acatcttgct gatgctgtcg
     4801 caagaattgg cggtgatcga caatttgagc ggcaaaatcc atctcgtcgt ttacgccgat
     4861 ccgtcgcagc ccgacggcta cgaacgcgcc cgcgaacgcc tcgaagacat ccgcacccag
     4921 ttgcgccaaa gctgcgccat cccgctctcg ctcggcagca aacacaccga agccgtcagc
     4981 gaattcggcg aagagccgtt caaagcctgc gttaacaaaa tcaaagacta catcttcgca
     5041 ggcgactgca tgcaggttgt ccccagccag cgcatgagca tggaattcac cgacagcccg
     5101 ctcgccctct accgcgccct gcgtacgctc aacccttcgc cttatctctt ttactacgat
     5161 ttcggcgatt tccacatcgt cggctcctcg cccgaaatcc tcgtccgacg cgaacgcaac
     5221 gacgttatcg tccgccccat cgccggcacg cgcctgcgcg gcaaaacccc cgccgaagac
     5281 cttgccaacg aacaagattt gttaagcgat gccaaagaaa tcgccgaaca cgtcatgttg
     5341 attgacttag gacgcaacga cgtcggccgc atcagtaaaa ccggcgaagt caaagttacc
     5401 gacaaaatgg tgattgaaaa atactcccat gtaatgcaca tcgtttccaa cgtcgaaggc
     5461 cgtctgaaag acggcatgac caacatggac atcctcgccg ctaccttccc tgccggcaca
     5521 ctctccggcg cacccaaagt ccgcgccatg gaaatcatcg aagaagtcga accgagcaaa
     5581 cgcggcatct acggcggtgc cgtcggcgta tggggtttca acaacgacat ggatttggca
     5641 atcgccatcc gcaccgccgt agtaaaaaac aacacgctat acgtccaaag cggcgcgggc
     5701 gtggttgccg actccgatcc ggcctccgaa tggcaggaaa cacaaaacaa agcccgagcc
     5761 gtcatacacg ccgcgcaaat ggtacaggaa gggttggata aatgacttat gaaaaacttt
     5821 atgagcttcg ccaaacactc agaccgacta ccaaagacgg tctctataca gataatgaaa
     5881 aaaatcgaga aatcctaacg gttagatgga gcggcaacac agaaaatcct aaaaatttct
     5941 cagctgtcgc tataggaatt aatccaagta aagcaaatga tgaaagaagc gacaaaaccc
     6001 ttacccaact tgcacgtttc ttggatatgt acggttttac caacttcaaa atgttaaata
     6061 ttttttccag ttactctaca cagcaaacag gaattaggac aaacacccaa accgattttt
     6121 ccaaatttaa aggatgtttg gaagatgctg atatgattat tcttgcatgg ggtacagacc
     6181 gcggtgctta taaggatgaa aaaaaacaga atactggaat ttctaaaagc agaaaaattt
     6241 atggaaaaag tattctgtat ttctgaaact ggtaattcca gcgatacaag acatccgtca
     6301 agaattagtt atagctatca acttgtacaa tttgaagagt cagcatgaaa aacatatctc
     6361 tttctccgcc cgccacgctc ggaatcctcg gcggcggaca attaggcaga atgtttaccg
     6421 ttgccgccaa aaccatgggc tacaaagtaa ccgtactcga ccccgatccg aacgctccgg
     6481 cggcggaatt tgccgaccgc catttgtgcg cgccgtttaa cgaccagacc gcgttggacg
     6541 agttggcaaa atgcgcggcg gttacgaccg aatttgaaaa cgtcaatgcc gacgcgatgc
     6601 gttttctggc aaaacatacc aacgtttccc ccagcggcga ctgcgttgcc atcgcgcaaa
     6661 accgcattca ggaaaaggca tggatacgca aagcaggtct gcaaaccgcg ccgtatcaag
     6721 cagtttgcaa agccgaagac atcactgaag caagcgcgca attcctgccc ggtattctga
     6781 aaacggccac tttgggctac gacggcaaag gtcaaatccg cgtcaaaacg gtggacgaac
     6841 tcaaagccgc gtttgccgaa cacggcggcg tggattgcgt tttggaaaaa atggtggatt
     6901 tgcgcggcga aatttccgtt atcgtatgcc gtctgaacaa tgacaacgtg caaactttcg
     6961 atcctgccga aaacattcac gaaaacggta tcctcgccta ctccatcgtc ccagcccgac
     7021 tgagtgccga cattcagcaa caggcgcgac aaatggcgca gcgtttggcc gatgaattga
     7081 actacgtcgg cgtattggcg gtagaaatgt ttgttgtcgg cgacacgcat gaattggtcg
     7141 tcaacgaaat cgcgccgcgt ccgcacaatt ccggccacca taccgtcgac gcctgcgcgg
     7201 cagaccaatt ccagcaacag gtccgcctga tgtgcaacct gccacctgct gacaccaaat
     7261 tgctgagttc ttgctgtatg gcgaatattt tgggcgacgt ttggcaggaa gacggcggcg
     7321 aaccggattg gtttcccctg caaagccggc cggacgcgca cctgcacctt tacggcaaaa
     7381 aaaccgcgca caaagggcgg aaaatgggac actttaccgt tttaaccacc gattcggaca
     7441 ccgcatttca agaagcaaaa aaactgcatc agtccctata atccgaccaa cggcacagat
     7501 gccgtctgaa gccgccgaca tactgccatg aacctgctga cactgttacg ccccgccacc
     7561 gtgcaagact gcaaagacat cttcaaagtc cacctgcact ccgtccaata cacctgcatc
     7621 ctcagctaca acgaacacgc cctaaaagta tgggaaggct tgttaaacac agaaagctac
     7681 ctgccgacca tttccgatcc cgacaaagca ctttgggttg ccgaatacaa aggcaacata
     7741 cagggatttt tccaaatcga ctgccaagaa gcacaactcg atgcacttta cgtccacccc
     7801 ctgttccaca acctcggact gggcactgcc ctgcttcatc aggcggaaac catcgcccac
     7861 aaatctggtt tgagctttct gaaactctac gcatcgctca actccgtccc gttttacctt
     7921 ctcaaccgct acgaatcgct cggttcggca gtattgcagc ttgaccccag catcaaaatc
     7981 aaatgcgaac tgatgcggaa acacctctga tccgtcctta taaccaaaac tgataatctt
     8041 caaatcaaac attatttcca caagcgcaga cagccgtata aagttgcccc atctaccaac
     8101 cgacaggaca agcatatgaa aacctacgca ccggcactct ataccgcagc cctgctcacc
     8161 gcctgcagcc ccgcagccga ttcaaaccat ccgtccggac aaaatgcccc ggccaatacc
     8221 gaatccgacg gaaaaaacat taccctgctc aacgcctcat acgatgtggc acgggatttt
     8281 tacaaagaat acaacccctt atttatcaaa acataccaat ccgaacaccc cggcacatcc
     8341 gtcagcatcc aacagtccca cggcggctcc agcaaacagg cattatccgt agccaacggc
     8401 cttcaagccg atgtcgtaac catgaaccaa tcctccgaca tcgacctgct cgaaaaaaaa
     8461 ggactggtag aaaaaggctg gcaacaagcc ctccccgacc acgccgcgcc ctacaccagc
     8521 actatggttt tccttgtccg aaaaaacaac cccaaacaga tccgcgattg gaacgacctt
     8581 gccaaagacg gcgttaacat cgtcatcgcc aatcccaaaa cctcgggcaa cggacgctac
     8641 gccttcctcg gcgcatacgg ttacggtctg aaagccacca acggcaacga acaggaagcc
     8701 caaaaactcg tcgcatccat cctcaaaaac acccccgttt ttgaaaacgg cggacgcgcc
     8761 gccaccacca ccttcacaca acgcaacatc ggcgacgtac tcattacttt tgaaaacgaa
     8821 gccaactacg tcagcaaaaa actgacccaa ggacagtttg aaatcgtcta tccgagctac
     8881 accatttccg ccgaaagccc cgtcgccgtc gtcaacagcg tcgtcgcgaa aaaaggcacg
     8941 caaaaaaccg cccgcgccta tctcgaatac ctttggagcg aaccggcgca agaactcgcc
     9001 gcctcactct acctgcgccc ccgcaacccc gaagtattgg caagacacaa agccgacttc
     9061 ccagacttag acaccttctc tcccgaagaa aaattcggcg gatgggacaa catcatgaaa
     9121 acctacttcg ctgacggcgg catattcgac cgcctgaccg cacaaaaatg accgctatgc
     9181 cgtctgaacc gcctttcaga cggcattcca cacatcaaaa cagaaaaacc gcgcccaaaa
     9241 tcatcatcac aagacacaac ggcaaaccgg atacaaaacc caacaccgcc gccaaaatgc
     9301 cgtctgaagc cgtcggcgca accatcctta tctggggcat aactttcctt aaccatccct
     9361 tttgacagcc aaataaacag tgcttttgcc tgtcagaaac aaaaccaata ttttgcagtt
     9421 cgtatcggaa catttatagt ggattaacaa aaaccagtac agcg
//
LOCUS       DAWITQ010000070         9436 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.070, whole genome shotgun sequence.
ACCESSION   DAWITQ010000070 DAWITQ010000000
VERSION     DAWITQ010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9436)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9436)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9436
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.070"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(144..1586)
                     /gene="aldA"
                     /locus_tag="WIX18_001248"
     CDS             complement(144..1586)
                     /gene="aldA"
                     /locus_tag="WIX18_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HEZ5238356.1"
                     /translation="MKQLAMYINGRFENDFNGEWRDVLNPSTEEAIAREPKGGRADVD
                     RAVAAARAAQPAWERLPAVERGAYLRKIAQGIRERADELTDTIVAEGGKTKDLARVEV
                     MFTADYLDYQAEWARRYEGEIIQSDRPRENILLFKRPLGVIAGILPWNFPFFLIARKM
                     GPALVTGNTIVVKPSSVTPINCHIFAEIVDAVGLPAGVFNVVNGPGAEIGNALSAHPQ
                     VDMVSLTGSVEAGRQVMEAASANITKVSLELGGKAPAIVLKDADLDLAVKSILASRVG
                     NTGQICNCAERVYVHSSLKDAFIEKMTAAMKGVRYGNPAEAEAGALEMGPLIEERAVK
                     AVAEKVERAVKQGAKLVCGGKRAEGRGYFFEPTLLTDTDNSMDIMKEETFGPVLPVSA
                     FDTLDQVIALANDCEFGLTSSVYTTNLNEAFYVTRRLQFGETYINRENFEAMQGFHAG
                     WKKSGIGGADGKHGLEEYLQTQVVYLETDI"
     gene            complement(1621..1821)
                     /locus_tag="WIX18_001249"
     CDS             complement(1621..1821)
                     /locus_tag="WIX18_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238357.1"
                     /translation="MDTVGSLAIGYATGGNAGAFTGANADWNNRQLHSSEYKLAEQYA
                     DIVASRLNISKETCTVIYLGIN"
     gene            complement(1830..2219)
                     /locus_tag="WIX18_001250"
     CDS             complement(1830..2219)
                     /locus_tag="WIX18_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238358.1"
                     /translation="MLYKCKIKKLDNTIEEAVLIEINGYELHCFISYCPFKIFENQFY
                     EVELSYEIFNDYILDKSTSNIGFRKIDDSFKYEITAELKNNHLTLQNIQFEEDEYLIN
                     YSYLDNCLVTLTVDRISVSFIREIQAA"
     gene            complement(2427..3344)
                     /locus_tag="WIX18_001251"
     CDS             complement(2427..3344)
                     /locus_tag="WIX18_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ5238359.1"
                     /translation="MEKAEHLNSSRFVNLVKSGGGSYVEGSYRFDTLSNGISIHGGTV
                     TARCDFCSSRLAEPYVSFVLLLEGSLDFGINRRRFQIDADGGKIVLIAVGEEVLFSRY
                     LYRGGKTVKMTIKGMEQWLLRPEYARFAPLLYREPVRIWNLSPNLRGSAASCLKAVPK
                     GHLGETLRREADVLRLLSDLWDTVSDGIGPAAGQTAEADAMPSEDFNRTLNAAFADGA
                     HQVNRLTDALNISERTLQRRMRDHFGITASEWLHHKQMQHALYLLQNGGKSIGETAYL
                     CGYRHVSSFTQAFRQYFGSTPAETKKENR"
     gene            3516..4316
                     /locus_tag="WIX18_001252"
     CDS             3516..4316
                     /locus_tag="WIX18_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ5238360.1"
                     /translation="MSPSPFIEMKDVAFAYGDRPILKNINFSIPQGNFAAVMGGSGSG
                     KTTLMRLITGQIRPQSGQVLIEGRDLAGFSADELYEHRRRMGVLFQHGALFTDLSVFD
                     NIAFPMRELTRLPEAVIRDLVLLKLNAVGLRGVENLMPSELSGGMSRRVALARTIALD
                     PEIMLYDEPFTGLDPISLGVIAHLISRVNKALRSTSIMVTHDIEKSLEIVDQVIFLAH
                     GEIMFSGSPQEMRELDSPWVRQFVGGLADGPVAYRYPAQTSLQQDLLG"
     gene            4365..5141
                     /gene="mlaE"
                     /locus_tag="WIX18_001253"
     CDS             4365..5141
                     /gene="mlaE"
                     /locus_tag="WIX18_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HEZ5238361.1"
                     /translation="MNFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVR
                     QVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLA
                     AILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIF
                     NVAGIFGAYLVGVTWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQ
                     GFHCVPTSEGILRASTRTVVSSALTILAVDFILTAWMFTD"
     gene            5192..5686
                     /gene="mlaD"
                     /locus_tag="WIX18_001254"
     CDS             5192..5686
                     /gene="mlaD"
                     /locus_tag="WIX18_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HEZ5238362.1"
                     /translation="MKKNILEFWVGLFVLIGAAAVAFLAFRVAGGAAFGGSDKTYAVY
                     ADFGDIGGLKVNAPVKSAGVLVGRVGAIGLDPKSYQARVRLDLDGKYQFSSDVSAQIL
                     TSGLLGEQYIGLQQGGDTENLAAGDTISVTSSAMVLENLIGKFMTSFAEKNADGGNAE
                     KAAE"
     gene            5723..6313
                     /locus_tag="WIX18_001255"
     CDS             5723..6313
                     /locus_tag="WIX18_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HEZ5238363.1"
                     /translation="MKKSSLISALGIGILSIGMAFAAPADAVNQIRQNATQVLSILKS
                     GDANTARQKAEAYAIPYFDFQRMTALAVGNPWRTASDAQKQALAKEFQTLLIRTYSGT
                     MLKLKNANVNVKDNPIVNKGGKEIIVRAEVGVPGQKPVNMDFTTYQSGGKYRTYNVAI
                     EGASLVTVYRNQFGEIIKAKGVDGLIAELKAKNGSK"
     gene            6370..6648
                     /locus_tag="WIX18_001256"
     CDS             6370..6648
                     /locus_tag="WIX18_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance protein MlaB"
                     /protein_id="HEZ5238364.1"
                     /translation="MHTELNNGTLHISGDVTVKTLTAAAFTRFRQQCRLKDTRAVDLS
                     GVGRADSACVSLLLEVLRGCKGSVRLTGIPESVRALSELYEIKDWLKS"
     gene            6645..7472
                     /locus_tag="WIX18_001257"
     CDS             6645..7472
                     /locus_tag="WIX18_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HEZ5238365.1"
                     /translation="MKKTAYAFLLLIGFASAPAFAETRPADPYEGYNRAVFKFNDQAD
                     RYIFAPAARGYRKVAPKPVRAGVSNFFNNLCDVVSFGSNILRLDIKRASEDLVRVGIN
                     TTFGLGGLIDIAGAGGIPDNKNTLGDTFASWGWKNSNYFVLPVLGPSTVRDALGTGIT
                     SVYSPKNIVFRTPVGRWGTTAVSAVSTREGLLDLTDSLDEAAIDKYSYTRDLYMKVRA
                     RQTGATPAEGTEDNIDIDELVESAETGAAETAVQEDSVSETQAEAAGEAETQPGTQP"
     gene            7597..7959
                     /locus_tag="WIX18_001258"
     CDS             7597..7959
                     /locus_tag="WIX18_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ"
                     /protein_id="HEZ5238366.1"
                     /translation="MYEVNRSVFVLIPLEPFWNWLQTLPGNHLDGLTLEDIQADANSY
                     LVRPCETADEVWDEIEARFEDIFAAELADWCEDEREWPALDADIFNEWFDIQLSTVIT
                     DLEHEPLAREAFQPINLN"
     gene            7956..8342
                     /locus_tag="WIX18_001259"
     CDS             7956..8342
                     /locus_tag="WIX18_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEZ5238367.1"
                     /translation="MMKLTVRNYHLDGYGHVNNARYLEFFEEARWAFFEERGLLHELA
                     GLILIVARIDIRYSRPAVEGDVLQFSCRLKTPGTRRIVLTQTITLPNGKTAAEADITL
                     MPVHAATQRTVSLPATLARALEALSE"
     gene            8339..8827
                     /locus_tag="WIX18_001260"
     CDS             8339..8827
                     /locus_tag="WIX18_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEZ5238368.1"
                     /translation="MKKILTAAVVALIGILLAIVLIPDSKTAPAFSLPDLHGKTVSNA
                     DLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVK
                     DYGLPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAL
                     AQ"
     gene            complement(8908..9075)
                     /locus_tag="WIX18_001261"
     CDS             complement(8908..9075)
                     /locus_tag="WIX18_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HEZ5238369.1"
                     /translation="MEDDVWPGRRVIVMAGVTVGRGSVVGAGAVVTKDIPPYSLAAGN
                     PAVVKKNLPEG"
     gene            complement(9042..9416)
                     /locus_tag="WIX18_001262"
     CDS             complement(9042..9416)
                     /locus_tag="WIX18_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-o"
                     /protein_id="HEZ5238370.1"
                     /translation="MGSKFFFLLLRFAGSVLPPSHMRGIVGRRVRGFLARRVSPHIGR
                     GVNIERGAYVFPDTVLGDGSGIGANCEICRGPVVGKNVMMEPECLFYSNNHKFDRSKN
                     ALRATRKSVRLRWRTMSGRGAG"
BASE COUNT         2171 a         2641 c         2378 g         2246 t
ORIGIN      
        1 cggcttcgtt taaatttaat ccgctataca aagacaaaaa catcgacctc ggtcatgact
       61 gattgccggt gaaactgtaa aaatgccgtc tgaacctgaa aacgggttca gacggcattt
      121 tctatcgggg ttttaaagcg gcattaaatg tcggtttcca gataaacgac ttgggtttgc
      181 agatattctt ccaaaccgtg tttgccgtcc gcgccgccga tgccggattt tttccagccc
      241 gcgtggaagc cttgcatggc ttcaaagttt tcgcggttga tgtaggtttc gccgaattgc
      301 aggcggcggg taacgtagaa ggcttcgttt aaattagtcg tataaacaga actggtcaga
      361 ccaaactcgc aatcgttagc cagtgcgatg acttggtcaa gcgtgtcgaa agcggaaacg
      421 ggcagcacgg ggccgaaggt ttcttctttc ataatgtcca tactgttgtc ggtgtcggtc
      481 agcagggtcg gctcgaagaa ataaccgcgt ccttcggcgc gtttgccgcc gcagaccagt
      541 ttcgcacctt gtttgactgc ccgttccact ttttcggcaa cggctttgac ggcgcgctct
      601 tcaatcagcg gacccatttc cagcgcgcct gcttcggctt cggcagggtt gccgtagcgc
      661 acgcctttca tggcggcagt cattttttca atgaatgcgt ctttcagact gctgtggaca
      721 taaacgcgct cggcgcagtt gcagatttga ccggtgttgc cgacacgcga agccaagatg
      781 gatttcaccg ccaaatccaa atccgcgtct ttcaaaacga tggcgggggc tttgccgccg
      841 agttccaacg aaactttggt gatgttggcg gaagcggctt ccatcacttg gcggcccgct
      901 tcgacggagc cggtcaggct gaccatatcg acttgcggat gggcggacaa ggcattgccg
      961 atttccgcac ccggaccgtt caccacgttg aacacgcctg cgggcaatcc gaccgcatcg
     1021 acgatttcgg cgaagatgtg gcagttgatc ggggttacgc tgctgggttt gacaacgatg
     1081 gtgttgcccg ttactaaggc gggacccatt ttgcgggcaa tcaggaagaa agggaagttc
     1141 cacggcaaaa tgccggcaat tacgcccagc ggacgtttga acaataaaat gttttcgcgc
     1201 gggcggtcgc tttggatgat ttcgccttcg taacggcgcg cccattcggc ttggtaatcg
     1261 agatagtcgg cggtgaacat cacttccacg cgcgccaagt ctttggtttt gccgccttcg
     1321 gcaacgatgg tgtcggtcag ctcgtcggcg cgttcgcgta tgccttgggc gattttgcgc
     1381 aaatacgcgc cgcgttcgac cgcaggcaga cgctcccaag ccggttgcgc cgcacgcgcc
     1441 gccgctacgg cgcggtcaac gtccgccctg ccgcctttgg gttcgcgggc gatggcctct
     1501 tcggtggacg ggttcaatac gtcgcgccat tcgccgttga aatcgttttc aaagcgtccg
     1561 ttgatgtaca tggccaattg tttcatttcg ggttctccag ttttgtagtc agatgtagtt
     1621 ttagtttatt cccaaataaa ttaccgtaca agtttctttt gaaatgttta gacgagaagc
     1681 tactatgtct gcatattgtt ctgctaattt atattcactc gaatgcaact gccgattatt
     1741 ccaatctgca ttcgcaccag taaaagcccc agcattgccg cctgtggcat aaccaatcgc
     1801 taaactgcca acggtatcca caacaggttt caggctgcct gaatttctct aataaatgaa
     1861 acacttattc tatcaaccgt taatgtaacc aaacaattat caagataaga gtagtttatt
     1921 aaatactcat cttcttcaaa ttgtatattt tgtagggtta gatgattatt ttttaattct
     1981 gccgttattt catacttgaa actatcatct atttttctaa atccaatatt tgaagttgat
     2041 ttatccagta tgtaatcatt aaagatttca taggataatt ccacttcata aaattgattt
     2101 tcaaatattt tgaatgggca gtacgatata aaacaatgta gttcataacc atttatttca
     2161 atcaatactg cctcttcaat ggtgttatct aactttttga ttttacattt atataacatt
     2221 tatcttgcct ttggataaat tgttttgttt tttggattgt tattcaaagt tctccaaaag
     2281 tcttttcctg attttgtatg tatcgtggta atactaccat tttcattggt tccaacaaaa
     2341 ataaatttag attgaccttt ggaatcagta cccaaaaact gaacatatcc agacatgcgg
     2401 atttcgggtt ttaaatcaaa tgcggcttat cggttttctt ttttggtttc cgcaggcgtg
     2461 ctgccgaaat attgcctgaa tgcctgagta aagctggaaa cgtggcggta gccgcacaaa
     2521 tacgcggttt cgcctatgct tttgcccccg ttttgcaaca ggtagagcgc gtgctgcatt
     2581 tgtttgtggt gcagccactc gcttgcggta ataccgaaat ggtcgcgcat acggcgttgc
     2641 agcgtccttt cactgatgtt cagcgcgtct gtcagccggt tgacttggtg tgcgccgtcg
     2701 gcaaacgcgg catttagggt gcggttgaag tcttcagacg gcatagcgtc tgcttccgcc
     2761 gtttgccccg ccgccggccc gatgccgtct gaaaccgtgt cccacaagtc cgacagcagc
     2821 cgcaaaacgt ccgcctcgcg gcgcaatgtt tcgcccaaat gcccctttgg gacagctttc
     2881 aggcaggatg ccgccgagcc gcgcaggttt ggggacaaat tccatattct gaccggttcg
     2941 cggtaaagca ggggtgcgaa acgcgcatac tccggacgca gcagccattg ttccatacct
     3001 ttaatggtca ttttgaccgt tttgccgcct cggtaaagat agcggctgaa caggacctct
     3061 tccccgacag caattaggac gatcttgccg ccatccgcat cgatttggaa gcggcggcgg
     3121 ttgatgccga agtccaaact gccttccagc aagagcacga acgacacata aggttcggcg
     3181 aggcggctgc tgcaaaaatc gcaccgtgcc gttaccgtgc cgccgtggat ggaaatgccg
     3241 ttggacaaag tatcgaaacg gtagctgccc tccacatagc tgccgccgcc gcttttgacc
     3301 agattgacga accggctgct gttcaaatgt tctgcttttt ccatagtttt ctgataaagg
     3361 ttatcatttg aaagataaca tttttcgcca cagcaaacaa tccgccgcca caacggcatt
     3421 ttcacaacat ttaccgtccg tatgccgtct gaaaattgcc cgtcttcccg ataagcctta
     3481 aaatacacgc cgtcaaacct accgtccgtc cgtacatgag cccatccccc tttatcgaaa
     3541 tgaaagacgt cgccttcgcg tatggcgacc gcccgattct gaagaacatc aatttcagca
     3601 ttccgcaagg caattttgct gccgtaatgg gcggttcggg cagcggcaaa accacgctga
     3661 tgcgactgat tacaggacag attcgtccgc agtccgggca ggttttgatt gaaggacggg
     3721 atttggcggg cttttcggct gacgagttgt atgaacaccg ccgccgtatg ggcgtattgt
     3781 tccaacacgg cgcgctgttt accgatttgt ctgtatttga caatattgct tttccgatgc
     3841 gcgaactgac gcgcctgccg gaagcggtga ttcgagattt ggttttgttg aaactgaacg
     3901 cggtcgggct gcgcggcgtg gaaaacctga tgccgtccga gttgtccggc gggatgtcgc
     3961 gccgcgtcgc gcttgcccgc acaatcgcgc tcgatcccga aattatgttg tacgacgagc
     4021 cgtttaccgg tctcgatccg atttccttgg gcgtgattgc ccacttgatc agccgcgtca
     4081 acaaggcttt gcgttcgacc agtattatgg tcacgcacga cattgaaaaa tctttggaaa
     4141 tcgtcgatca ggtgattttc ttggcgcacg gcgaaattat gttctccggc tcgccgcagg
     4201 aaatgcgcga actggattcg ccttgggtgc gccagtttgt cggcgggctg gcagacggcc
     4261 ccgtggcata ccgttatccg gcgcaaacgt cgttgcagca ggatttgctc gggtaaattg
     4321 agccggtgcc gtctgaaacc gttgaacttt acatatagaa atttatgaat tttatccgtt
     4381 ccgtcggggc gaaaaccctc ggccttattc aatccctcgg cagtattacg ctgtttctgc
     4441 tgaacattct ggcgaagtcc ggtacggctt tcgtccgtcc gcgcctgagc gtgcgccaag
     4501 tgtattttgc cggcgtgctg tcggtgctga ttgttgccgt ttcggggctg ttcgtcggca
     4561 tggtcttggg tttgcagggc tatacgcagt tgtcgaaatt caaatccgcc gatattttgg
     4621 gctatatggt tgcggcttcg ctgttgcgcg aactgggtcc ggtgttggcg gcgattctgt
     4681 ttgccagcag cgcgggcggt gcgatgacca gcgaaatcgg tttgatgaaa acgaccgaac
     4741 agctcgaagc gatgaacgtg atggcggtaa accccgtcgc ccgagtggtt gcgccgcgct
     4801 tttgggcggg cgtgttttcc atgccgcttt tggcttcgat tttcaacgtg gcgggtattt
     4861 tcggcgcgta tttggtcggt gtaacctggc tgggcttgga cagcggtatt ttctggtcgc
     4921 aaatgcagaa caatatcacg atacattacg atgtaatcaa cggtctgatt aaatccgccg
     4981 cgttcggcgt ggcggtaacg ctgattgccg tgcatcaggg cttccattgc gtcccgactt
     5041 cggaaggcat tttgcgcgcc agcacgcgca cggtggtttc gtccgccctg acgattttgg
     5101 cggtcgattt tatattgacc gcgtggatgt ttacagattg acaggccgtc tgaagacgaa
     5161 acgcggaaca tcggatattc aaggaacttt aatgaaaaag aacatattgg aattttgggt
     5221 cggactgttc gtcctgattg gcgcggcggc ggttgccttt ctcgctttcc gcgtggccgg
     5281 cggtgcggcg ttcggcggtt cggacaaaac ctacgccgtt tatgccgatt tcggcgacat
     5341 cggcggtttg aaggtcaatg cccccgtcaa atccgcaggc gtattggtcg ggcgcgtcgg
     5401 cgctatcgga cttgacccga aatcctatca ggcgagggtg cgcctcgatt tggacggcaa
     5461 gtatcagttc agcagcgacg tttccgcgca aatcctgact tcgggacttt tgggcgagca
     5521 gtacatcggg ctgcagcagg gcggcgacac ggaaaacctt gctgccggcg acaccatctc
     5581 cgtaaccagt tctgcaatgg ttctggaaaa ccttatcggc aaattcatga cgagttttgc
     5641 cgagaaaaat gccgacggcg gcaatgcgga aaaagccgcc gaataaacgt atgccatcat
     5701 attcaaacta ggacacttaa tcatgaaaaa atcctccctc atcagcgcat tgggcatcgg
     5761 tattttgagc atcggcatgg catttgccgc tcctgccgac gcggtaaacc aaatccgtca
     5821 aaacgccact caagtattga gcatcttaaa aagcggtgat gccaacaccg cccgccaaaa
     5881 agccgaagcc tatgcgattc cctatttcga tttccaacgt atgaccgcat tggcggtcgg
     5941 caacccttgg cgcaccgcgt ccgacgcgca aaaacaagcg ttggccaaag aatttcaaac
     6001 cctgctgatc cgcacctatt ccggcacgat gctgaaatta aaaaacgcca acgtcaacgt
     6061 caaagacaat cccatcgtca ataaaggcgg caaagaaatc atcgtccgcg ccgaagtcgg
     6121 cgtacccggg caaaaacccg tcaacatgga cttcaccacc taccaaagcg gtggtaaata
     6181 ccgtacctac aacgtcgcca tcgaaggcgc gagcctggtt accgtgtacc gcaaccaatt
     6241 cggcgaaatc atcaaagcga aaggcgtgga cggactgatt gccgagttga aggctaaaaa
     6301 cggcagcaag taatccataa gccatgccgc cagactgaag atggcatgga ttttttccta
     6361 ccgaacacta tgcatacaga actcaacaac ggaacactgc acatcagcgg cgacgtaacc
     6421 gtcaaaaccc tgaccgccgc cgcctttacc cgcttcagac agcaatgtcg tctgaaagac
     6481 acccgcgcgg ttgatttgag cggcgtcgga cgcgccgatt ccgcctgcgt gtcgctgctg
     6541 ctcgaagtgc tgcgcggttg caaaggcagc gtcaggctga ccggcattcc cgaatccgtg
     6601 cgcgcgctgt ccgaactgta cgaaatcaaa gactggctga aatcatgaaa aaaaccgcct
     6661 atgccttcct cctgctgatc gggttcgctt ccgcccctgc atttgccgaa acccgccccg
     6721 ccgaccctta tgaaggctac aaccgcgccg ttttcaaatt caacgaccaa gccgaccgct
     6781 acattttcgc ccctgccgcg cgcggctacc gcaaagttgc gccgaaaccc gtccgcgccg
     6841 gcgtgtccaa tttttttaac aacctgtgcg acgtggtcag cttcggcagc aatatcttgc
     6901 gcttggacat caaacgcgca agcgaagacc ttgtccgcgt cggcatcaac accactttcg
     6961 gtttgggcgg gcttatcgac atcgccggcg cgggcggcat tcccgacaat aaaaacacct
     7021 tgggcgacac gtttgcttcg tggggatgga aaaacagcaa ttatttcgtg ttgcccgtct
     7081 tagggccgtc caccgtccgc gacgcgctcg gcacgggtat tacctccgtt tattcgccca
     7141 agaatatcgt cttccgcacc cctgtcggac gctggggcac gactgccgta tccgccgtca
     7201 gtacgcgcga aggtctgctc gatttgaccg acagtctgga cgaagccgcc atcgacaaat
     7261 acagctacac gcgcgacctc tatatgaaag tccgtgcgcg gcagaccggt gcaacacctg
     7321 ccgaaggtac ggaagataac atcgacatcg acgaattggt cgaaagtgcc gaaaccggcg
     7381 cggcggaaac tgccgttcaa gaagattccg tatccgaaac acaggcagaa gcagcagggg
     7441 aagccgaaac gcaacctgga acacaacctt aaagccatgc cgtctgaaaa tccgtgttcg
     7501 gacggcattc ccttctgtcg gaacggacag tccgaaacca cagattgggc tataatctct
     7561 tttttgcgca taccgcgcga cagtaaagga aaaaccatgt acgaagtcaa ccgcagcgta
     7621 ttcgtcctca tccctttaga acctttttgg aactggctgc aaaccctgcc gggcaaccac
     7681 ctcgacggac tgactcttga agacatccaa gccgacgcca attcctacct tgtccgcccg
     7741 tgcgaaaccg ccgacgaagt atgggacgaa atcgaagccc gttttgaaga cattttcgcc
     7801 gccgaacttg ccgactggtg cgaagacgaa cgcgagtggc ctgcgctcga tgccgacatt
     7861 ttcaacgaat ggttcgacat ccagctttct accgtcatca ccgacctcga acacgaaccg
     7921 cttgcccgcg aagccttcca acccatcaac ctgaactgat gaagctgacc gtccgcaact
     7981 accatctcga cggctacggc catgtcaaca atgcgcgcta cctcgaattt ttcgaagaag
     8041 cgcgctgggc gttttttgaa gaacgcggac tgctgcacga gttggcaggc ctcatactga
     8101 ttgtcgcccg catcgacatc cgatacagcc gccccgccgt cgaaggcgac gtattgcagt
     8161 tttcatgccg cctgaaaacc cccggcacgc gccgtattgt gctgacccag acgattacac
     8221 tgccaaacgg caaaaccgcc gcagaagccg acatcaccct gatgcccgtc cacgccgcca
     8281 cacaacgcac cgtcagcctg cccgccaccc ttgcccgcgc attggaagcc ttgtccgaat
     8341 gaaaaaaata ctcaccgccg ccgtcgtcgc actgatcggc atcctccttg ccatcgtcct
     8401 catccccgac agcaaaaccg cgcccgcctt ctccctgccc gacctgcacg gaaaaaccgt
     8461 ttccaacgcc gacctgcaag gcaaagtaac cctgattaat ttttggtttc cctcctgtcc
     8521 gggttgtgtg agcgaaatgc ccaaaatcat taaaacggca aatgactata aaaacaaaaa
     8581 cttccaagtc cttgccgtcg cccagcccat cgatccgata gaaagcgtcc gccaatatgt
     8641 caaagactac ggtttgccgt ttaccgtcat gtatgatgcg gacaaagctg tcggacaggc
     8701 gttcggcaca caggtttatc cgacttccgt ccttatcggc aaaaaaggcg aaatcctcaa
     8761 aacttatgtc ggcgaacccg atttcggcaa actctaccaa gaaatcgata ccgcgctggc
     8821 gcaatagcga tgccgtctga agcgcaaaaa acagaaacga tgttcctgtt ttttcagatc
     8881 atccgccccg acacgttcag acggcattca accttccggc agattctttt tcaccactgc
     8941 cggattgcct gccgccaaag agtagggcgg aatgtctttt gtaaccaccg cgcctgcgcc
     9001 cacgaccgaa ccgcgtccga cggttacgcc cgccattaca atcaccctgc gccccggcca
     9061 gacatcgtcc tccaacgtaa tcggacggat ttccgtgtag ccctcaaagc gttttttgaa
     9121 cggtcaaact tgtggttatt tgaataaaac agacattccg gctccatcat cacatttttg
     9181 ccgaccaccg gcccacggca gatttcacag tttgccccga tgcccgagcc gtcgcccaaa
     9241 accgtatccg gaaacacata cgccccgcgt tcgatattga ccccgcgtcc aatatgcgga
     9301 gaaacccgcc gcgccaaaaa accgcgtacc cgtctgccga cgatgccgcg catatgcgac
     9361 ggcggcaaca ccgaaccggc aaaacgcagc agcaggaaaa agaattttga tcccatcaaa
     9421 cctccctcaa aagaac
//
LOCUS       DAWITQ010000071         9206 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.071, whole genome shotgun sequence.
ACCESSION   DAWITQ010000071 DAWITQ010000000
VERSION     DAWITQ010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9206)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9206)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9206
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.071"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            90..299
                     /locus_tag="WIX18_001263"
     CDS             90..299
                     /locus_tag="WIX18_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HEZ5238371.1"
                     /translation="MPYVNIKVTGGKEAPTAAQKAELIGGVTELLARVLGKNPETTVV
                     VIDEVDTDNWGIGGKSVSERRKEGR"
     gene            388..1602
                     /locus_tag="WIX18_001264"
     CDS             388..1602
                     /locus_tag="WIX18_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEZ5238372.1"
                     /translation="MDKFPKSAKLDHVCYDIRGPVHKKALQLEEEGNKILKLNIGNPA
                     PFGFEAPDEILVDVIRNLPTSQGYCDSKGLYSARKAIVHYYQTKGLRDITVNDVYIGN
                     GVSELITMSMQALLNDGDEILIPAPDYPLWTAAATLAGGTVRHYLCDEENGWFPNLAD
                     MEAKITPKTKAIVVINPNNPTGAVYSREILLEIAELARKHGLIIFADEIYDKILYDGA
                     VHHHIAALAPDLLTVTFNGLSKAYRVAGFRQGWMVLNGPKHHAKGYIEGLDMLSSMRL
                     CANTPMQHAIQTALGGYQSINEFILPGGRLLEQRNRAWELVNQIPGVSCVKPMGAMYM
                     FPKIDTEMYRIHDDMKFVYDLLVREKVLLVQGTGFNWIKPDHFRIVTLPYVHQIEEAM
                     GRLARFLQTYRQ"
     gene            complement(1689..4268)
                     /gene="clpB"
                     /locus_tag="WIX18_001265"
     CDS             complement(1689..4268)
                     /gene="clpB"
                     /locus_tag="WIX18_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HEZ5238373.1"
                     /translation="MRYDKLTAKFQQALAEAQSLALAADGSYLEAGFVLKALLDDQNS
                     GAAALLAHAGVNVPQVKQRLQQHLNSLPKVSGQGGDIMPSRELQAVLNLMDKAATKRG
                     DAYIASELFLLALVQQNDATGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDA
                     LKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIF
                     IDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ
                     KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAID
                     LIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEING
                     LQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEH
                     LEKQRAAAERADTDSTKPANKLLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKM
                     EEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAG
                     FLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDE
                     VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV
                     KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTV
                     SDAALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIRVEADGDRL
                     KFA"
     gene            4529..5539
                     /gene="trpS"
                     /locus_tag="WIX18_001266"
     CDS             4529..5539
                     /gene="trpS"
                     /locus_tag="WIX18_001266"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEZ5238374.1"
                     /translation="MSKKRVLTGVTTTGIPHLGNYVGAIRPAVRAAQNPDTESFLFLA
                     DYHGIIKCHEPEMIHQSTQAVAATWLACGLDPERTTFYRQSDIPEVMELNWILTCITA
                     KGLMNRAHAYKAAVQANAENNQEDPDFGVEMGLFSYPILMTADILMFNANEVPVGRDQ
                     IQHVEMARDIAGRFNHRFKEIFTLPEVKIDENVELLVGLDGRKMSKSYGNTIPLWEND
                     KKTQKSVNKIITNMKEPGEPKQPDESPLFEIYKAFSTPSETVEFTKMLADGLAWGEAK
                     KLLAAKINAELAEPRERYNELTADPSQIEEILQAGAQKARKEARELLDKVRDAVGIRP
                     LK"
     gene            5545..5886
                     /locus_tag="WIX18_001267"
     CDS             5545..5886
                     /locus_tag="WIX18_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238375.1"
                     /translation="MPSEPLKGLPEQNVVRLTGKHPNDLEAVVGKCMETDGKGAPSGW
                     AANGVCHTLFAKLVGNIAEDGGKLTDYLISHSALQPYQAGKSGYAAVQNGRYVLEIDS
                     EGAFYFRRRHY"
     gene            6208..6531
                     /locus_tag="WIX18_001268"
     CDS             6208..6531
                     /locus_tag="WIX18_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238376.1"
                     /translation="MKKLLIAAMMAAALAACSQEAKQEVKEAVQAVESDVKDTAASAA
                     ESAASAVEEAKDQVKDAAADAKASAEEAVTEAKEAVTEAAKDTLNKAADATQEAADKM
                     KDAAK"
     gene            complement(6740..8248)
                     /gene="ppx"
                     /locus_tag="WIX18_001269"
     CDS             complement(6740..8248)
                     /gene="ppx"
                     /locus_tag="WIX18_001269"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HEZ5238377.1"
                     /translation="MTTHPANVLASVDLGSNSFRLQICENNNGQLKVIDSFKQMVRFA
                     AGLDEQKNLSAASQEQALDCLAKFGERLRGFRPEQVRAVATNTFRVAKNIADFLPKAE
                     AALGFPIEIIAGREEARLIYTGVIHTLPPGGGKMLVIDIGGGSTEFVIGSTLNPDITE
                     SLPLGCVTYSLRFFQNKITAKDFQSAISAARNEIQRISKNMRREGWDFAVGTSGSAKS
                     IRDVLAAEMPQEADITYKGMRALAERIIEAGSVKKAKFENLKPERIEVFAGGLAVMMA
                     AFEEMKLDRMTVTEAALRDGVFYDLIGRGLNEDMRGQTVAEFQHRYHVSLNQAKRTAE
                     TAQTFMDSLCHAKNVTVQELALWQQYLGRAAALHEIGLDIAHTGYHKHSAYILENADM
                     PGFSRKEQTILAQLVIGHRGDMKKMSGIIGTNEMLWYAVLSLRLAALFCRSRQDLSFP
                     KNMQLRTDTESCGFILRIDREWLERHPLIADALEYESVQWQKINMPFKVEAV"
     gene            complement(8364..9096)
                     /locus_tag="WIX18_001270"
                     /pseudo
     CDS             complement(8364..9096)
                     /locus_tag="WIX18_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629272.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
BASE COUNT         2117 a         2393 c         2431 g         2265 t
ORIGIN      
        1 cgatttgaat ttttcagaaa atgaagcgga cgtttgggcg gaggcaactt gtttgataag
       61 atagcaatat tttaaaacgg agaaagatca tgccttatgt caatattaaa gtaaccggcg
      121 gcaaggaagc accgactgcc gcgcaaaaag cggaactgat cggcggcgta accgaattgc
      181 tggcacgcgt gctgggcaaa aatcccgaaa caacggttgt cgtgattgac gaagtggata
      241 ccgataactg gggaataggc ggcaaaagcg tcagcgaacg gcgcaaagag ggcaggtaaa
      301 aagcctgaaa atctcggttt gatgctttaa attccgcgtg aaaaagagta cattcccacc
      361 cattgcccaa aatttacgga acacatcatg gataaatttc ccaagtctgc aaagctcgat
      421 cacgtctgtt acgacatacg cgggccggtt cacaaaaaag cccttcagtt ggaagaggag
      481 ggcaataaaa tccttaaact caatatcggc aaccctgcgc cgttcggctt tgaagcccct
      541 gatgaaatct tggtcgatgt catccgcaac ctgccgactt cgcaaggcta ttgcgattct
      601 aaagggctgt attccgcccg caaagccatt gttcactact atcagaccaa aggtttgcgc
      661 gatattacgg taaacgatgt ctatatcggc aacggcgtgt ccgagctgat tacgatgtct
      721 atgcaggcat tgctcaacga cggcgacgaa atcctgattc ccgcgcccga ctaccctttg
      781 tggacggcgg cggcaacgct tgcgggcggt acggtacgcc attatctgtg cgacgaagaa
      841 aacggctggt tccccaacct tgccgatatg gaagccaaaa tcacgcccaa aaccaaagcc
      901 atcgtcgtca tcaatcccaa taatccgaca ggcgcggtgt acagcaggga aatcctgttg
      961 gaaatcgccg aactggcgcg caagcacggt ttgattattt tcgccgacga gatttacgat
     1021 aaaatccttt atgacggcgc ggttcaccac cacatcgccg cgcttgcccc cgaccttttg
     1081 acggtaacgt tcaacggttt gtccaaagcc taccgcgtcg ccggcttccg ccaaggctgg
     1141 atggtgctca acgggccgaa acatcatgca aaaggttaca tcgagggttt ggatatgctc
     1201 tcgtctatgc gcctgtgtgc caatacgccg atgcagcacg cgattcagac ggcattgggc
     1261 ggctatcaga gcatcaacga attcattttg cccggcggac ggcttttgga acagcgtaac
     1321 agggcgtggg aattggtcaa tcagataccc ggcgtatcct gcgtcaaacc gatgggcgcg
     1381 atgtatatgt tcccaaaaat cgataccgaa atgtaccgta tccacgatga catgaaattc
     1441 gtttacgatt tgctggtgcg cgaaaaagtc ttgctggtac agggaacggg gtttaattgg
     1501 attaaacctg accatttccg cattgtcacg ctgccttacg tccatcagat tgaagaggcg
     1561 atgggcaggt tggcaagatt cctgcaaacc taccgccaat aaggggacgg tttgtctgcc
     1621 gaggataaaa aatgccgtct gaaacggaga ttcccgtttc agacggcatt ttcaacagca
     1681 ggaacgaatc aggcaaattt cagtctgtcg ccgtcggctt ctaccctgat ttcgctttcg
     1741 ggcgcatagt ttccggcaag cagggctttt gccagcgggt tttcgatttc cgactggatg
     1801 gcgcgtttga gcggacgtgc gccgtaaatc gggtcgaaac cggctttggc gatgatgtcc
     1861 agagcggcat cggaaacagt caggcggagg ttttgttttt ccaaacgttt ttccaagcct
     1921 ttgagctgga ttttcgcaat gttgcggata ttatcctgat ccagtccgtg gaacacgacc
     1981 acttcgtcga tgcggttgat catttcagga cggaaatgct ctttcacatc ctccatcaca
     2041 acttctttca cggcttcgta gtcctgcgtg cccatttgtt ggatgtgctg gctgccaatg
     2101 ttggaagtca tcacaatcac ggtgttttta aaatctaccg tcctgccttg tccgtcggtc
     2161 aaacgaccgt catccaaaac ttgcagcagg atattgaaca cgtcgggatg ggctttttcc
     2221 acttcgtcca aaagaatcac gctgtacggt ttgcggcgga cttgctcagt caggtagccg
     2281 ccttcttcgt agccgacata gcccggaggc gcgccgatta agcgggcaac ggcgtgtttt
     2341 tccatatatt cggacatatc gatacgaatc agatgatctt cactgtcaaa caggaagcct
     2401 gccaatgcct tacacaattc ggtcttaccc acgccggtcg ggcctaagaa caggaagctg
     2461 ccgtaaggtt tgttcggatc ggcaagaccg gaacggctgc ggcggatagc gtcggacacg
     2521 gcacgcacgg cttcatcttg accgaccacg cggcggtgca atacttcttc catcttcagc
     2581 agtttgtcgc gttcgccttc catcattttg gacacgggaa taccggtcat acgggaaaca
     2641 acttctgcga tttcctccgc gccgacatta ttacgcaaga gtttgtttgc cggttttgtg
     2701 ctgtccgtat ctgcccgttc ggcggctgca cgctgttttt ccaaatgctc caaatcttca
     2761 tacatcaatt ttgaagccag tgccaaatcg ccttgccgtt ttgcctgttc gattttaatt
     2821 ttgacttcgt caatttgttt cttaatatta gcagcaccgt ctgaaattgc tttttcggct
     2881 ttccagattt cgtctaaatc ggcgtattct ttttgcagac cgttgatttc ctcgtctatc
     2941 agttccaaac gttttttgct ggcatcgtct ttttcttttt caacgtgtgc cttttccatc
     3001 cgaagctgaa tcagacggcg gtcgattttg tccattgctt ccggcttggt ttctttttcc
     3061 atcttgacac ggctggcggc ttcatcaatc aaatcaatcg ctttgtcggg caggaagcgg
     3121 tcggtgatgt agcggtcgct caactccgct gcggcaacga tagcagggtc ggtaatatcg
     3181 ataccgtggt ggatttcata acgctcctgc aaaccgcgca agatggcgat ggtgtcttcc
     3241 acgctgggct cgccgaccaa tactttttgg aagcggcgtt cgagtgccgc gtctttttcg
     3301 atgtattggc ggtattcgtc caaggtggtc gcgccgatac agtgcagttc gccccgcgcc
     3361 aaggccggtt tcagcatatt gcccgcgtcc atcgcgccgt cggttttgcc cgcgccgacc
     3421 aaagtatgga tttcatcaat gaaaatcaga gtgttgccgt cgtctttcgc caaatcgttc
     3481 aacacgcctt tcaagcgttc ttcaaattcg ccacggtatt tcgcgccggc aatcaatgcc
     3541 gccaagtcca gaaccaaaag gcgtttgttg cgcagggatt cgggtacttc gccgttgacg
     3601 atgcgttgcg ccaagccttc gacaatggca gttttaccca cgcccggttc gccaatcagc
     3661 acggggttgt ttttggtgcg gcgttgcaat acctgaattg cacggcggat ttcgtcgtca
     3721 cgaccgataa cggggtcgag cttaccgtcg cgggcgcgtt gggtcaaatc gagcgtatat
     3781 tttttcagcg catcgcgttg gtcttcggca ttggcatcgt tcacgttttg tcctcctcgt
     3841 accgcatcga ttgcggcatt aatgttttgt tcggtcgcgc cggcttcttt caaaattttg
     3901 ccggttgcat cgttctgctg caccaaggcg agcaggaaaa gttcgctggc gatataggca
     3961 tcgccgcgtt tggttgctgc tttgtccatc aggttcaaca ccgcctgcaa ttcgcggctg
     4021 ggcataatgt cgccgccctg tccggatact ttcggcaggc tgtttaaatg ctgctgcaaa
     4081 cgctgtttca cctgcggcac gttcacgccc gcatgagcca agagcgcggc ggctccgctg
     4141 ttttggtcgt caagcagggc ttttaacaca aagcccgctt ccagatagct gccgtccgca
     4201 gccaacgcca aactctgagc ttctgcaagg gcttgttgga atttggcggt taatttgtcg
     4261 tatcgcattt ttgtttcctt ttcaaaatgt ccgctgtcga agcctatatg tgcataattg
     4321 tggataactc aagttctgtt ttctgttttt ctatatttaa ttcgatatat cattgaattt
     4381 aaagtatata aaaatgtata ataatgtgta taactatatc ttcttaatat ggaaaagtct
     4441 gttgtcggct ggatgtaggt ggcaaatcgg gtataatcgg cgcatctttt tccctttcag
     4501 acggcattga tgccgcaagg acatttttat gagcaaaaaa cgagttctga ccggcgtaac
     4561 caccaccggc atcccgcatc tgggcaacta cgtcggcgcc atccgccccg ccgtccgcgc
     4621 ggcgcaaaac cctgataccg aatccttcct cttcctcgcc gattaccacg gtatcatcaa
     4681 atgccacgag ccggagatga ttcaccaatc cacccaagcc gttgccgcca cttggcttgc
     4741 ctgcggactc gaccccgagc gcaccacctt ctaccgccaa agcgacattc ccgaagtgat
     4801 ggaattaaac tggattctga cctgcatcac cgccaagggt ttgatgaacc gcgcccacgc
     4861 ctacaaagcc gctgtgcagg caaatgcaga aaacaatcag gaagatcccg atttcggcgt
     4921 ggaaatgggt ttgttcagtt atccgattct gatgactgcc gacatcctca tgttcaacgc
     4981 caacgaagtg cccgtcgggc gcgaccaaat ccaacacgtc gaaatggcgc gcgacatcgc
     5041 cggccgcttc aaccaccgct ttaaagaaat ctttaccctg cccgaagtga aaatcgacga
     5101 aaacgtcgaa ctcttggtcg gtttggacgg acgcaaaatg tccaaatcct acggcaacac
     5161 cattccgctt tgggaaaacg acaaaaaaac ccaaaaatcg gtcaacaaaa tcatcaccaa
     5221 tatgaaagag ccgggcgagc cgaaacagcc cgacgaaagc ccattgtttg aaatctacaa
     5281 agccttctcc acgccgtctg aaacggtgga atttacgaaa atgcttgccg acggcttggc
     5341 ttggggcgag gcaaaaaaac ttttggcggc gaaaatcaac gccgaactcg ccgaaccgcg
     5401 cgaacgctac aacgagctga ccgccgaccc ttcgcaaatc gaagagattt tacaggcagg
     5461 cgcgcaaaaa gcgcgtaaag aagcacgcga attgttggac aaagtacgcg atgcggtcgg
     5521 catccgcccg ttgaaataaa cccgatgccg tccgaacctc ttaaaggctt gccggaacaa
     5581 aacgtcgtcc ggctgaccgg caagcatccc aacgacttgg aagccgtcgt cggcaaatgt
     5641 atggaaaccg acggaaaggg cgcgccttcg ggctgggcgg caaacggcgt gtgccatacc
     5701 ttgtttgcca aactggtggg caatatcgcc gaagacggcg gcaaactgac ggattacctg
     5761 atttcgcatt ccgccctgca accctatcag gcaggcaaaa gcggctatgc cgccgtgcag
     5821 aacggacgct atgtgctgga aatcgacagc gaaggggcgt tttatttccg ccgccgccat
     5881 tattgaggta ttcggacatc ccggaatata tttgggtttt tcaaaccctg cgggaaaaaa
     5941 gtccgcaccg tcgggaaact caaaaggagg gggatatgtg ttacaatttt ccgaactgtt
     6001 ttcataaaat agttttcgga cgtgtttcaa tatggcattg atgccgcctt attgttcgag
     6061 aaaaaaaacc tttatattta aatataatgg gttttaacta aacgggaaac cgttttctct
     6121 ccggccgatg ggcaaaatca gccgattgat ggaacacggt ccgattttta agcaaaacct
     6181 taatcaacaa ctcaagaagg ataagacatg aaaaaattat tgattgccgc aatgatggcg
     6241 gctgccttgg cagcttgttc gcaagaagcc aaacaggagg ttaaggaagc ggttcaagcc
     6301 gttgagtccg atgttaaaga cactgcggct tctgccgccg agtctgccgc ttctgccgtc
     6361 gaagaagcga aagaccaagt caaagatgct gcggctgatg caaaggcaag tgccgaggaa
     6421 gctgtaactg aagccaaaga agctgtaact gaagcagcta aagatacttt gaacaaagct
     6481 gccgacgcga ctcaggaagc ggcagacaaa atgaaagatg ccgccaaata atttgttgcc
     6541 ttggcaaaaa tgatgggatg ccgcctgccg gcaacccaaa cgaaaccgcc tgaagatttt
     6601 caggcggttt ttgggttatg tgccccttgt tttttacgcc tgcatgaccg ttccgagcag
     6661 atgtgccgcg catatcggga tgttgcggac aggcaaatgc cgtctggaca gggtttggac
     6721 ggcatttgtt ccgtaaggtt cagacggcct cgactttaaa cggcatattg attttttgcc
     6781 attggacgct ttcatattcc aatgcgtcgg caatcagggg gtggcgttcc agccattccc
     6841 tgtcaatacg caggatgaag ccgcagcttt ccgtatccgt gcgcaactgc atgtttttcg
     6901 ggaaagacag gtcttggcgc gaacggcaga acagtgcggc aaggcgcagc gacaaaacgg
     6961 cataccacaa catttcgttg gtgccgatga tgccgctcat ttttttcata tcgccgcgat
     7021 gaccgatgac cagttgggca agtatggtct gttctttgcg tgagaaaccc ggcatatcgg
     7081 cgttttcgag gatgtaggcg gaatgcttgt gatagccggt gtgggcgatg tccaaaccga
     7141 tttcgtgcag cgcggcggcg cgtccgagat actgttgcca caaggcaagc tcttgaaccg
     7201 taacattttt agcgtggcag aggctgtcca taaaggtttg cgcggtctcg gcggtgcgtt
     7261 tcgcctgatt gaggctgacg tggtagcggt gttggaactc ggcaaccgtt tgtccgcgca
     7321 tatcttcgtt taaaccgcgc ccgatcaaat cgtaaaacac gccgtcgcgc agggcggctt
     7381 cggttacggt catcctgtcg agtttcattt cttcaaacgc cgccatcatc acggcaagtc
     7441 cgccggcaaa aacttcgatg cgttccggtt tcaggttttc aaatttggcc tttttgaccg
     7501 aaccggcttc gatgatgcgt tcggcgaggg cgcgcatgcc tttgtaggta atgtccgcct
     7561 cttggggcat ttcggcggca agcacgtcgc ggatggattt tgccgaaccc gatgtgccga
     7621 cggcgaaatc ccaaccttcg cgcctcatat ttttgctgat gcgctggatt tcgttgcggg
     7681 cggcggaaat ggcagattgg aagtctttgg cggtgatttt gttttggaag aagcgcaggc
     7741 tgtaggttac gcagcccaag ggcaggcttt cagtaatgtc gggattcagc gtcgagccga
     7801 tgacaaattc tgtcgaaccg ccgccgatgt cgataaccag cattttgccg ccgcccgggg
     7861 ggagggtgtg gatcacgccg gtataaatca gccgcgcctc ttcgcgcccg gcgatgattt
     7921 cgatggggaa acccagtgcc gcttcggcct tgggaaggaa atctgcgatg tttttggcga
     7981 cgcggaatgt attggttgcc acggcgcgca cctgttcagg gcggaagccg cgcaggcgtt
     8041 cgccgaattt tgccaggcag tccaaagcct gttcttggga agcggcactc aggtttttct
     8101 gttcgtccag accggcggcg aagcgcacca tctgtttgaa cgaatcgata acttttaatt
     8161 gtccgttgtt gttttcgcaa atctggaggc ggaaactgtt ggaacccaaa tcgacggagg
     8221 cgaggacgtt tgcgggatgg gtggtcatgg tggataccgg tgggggaaaa acgcaatgtt
     8281 actctgacgg cgcaggcgtt gacaataaat gatgcggcgg tttttgattc tgcccacgga
     8341 tgttgccgac ggcatttttg cgcttatttg aaatcctttt ccacgctcat gaaaatctgc
     8401 gtgtttttgc gtgtgtaaaa acttttcata ttgctgtcga ttttcagata gcggaaattg
     8461 agttgcggcg taaagccctt ccaagagatt ttgtcgtgcc acaacgacag gtttgcctga
     8521 tattcgtggt ctttgcgcgg gaagcggtac acaatggtcc cgggtgcgtc aaacatcctg
     8581 cgggtatagc gcaggtttgc ccgcagaccc aagcccgccg tcgaacgttt tgactgcgcc
     8641 gacacgcaaa cccttgcgga cggaagcctg ttccgcctct ttcgtcatgt tgtgcgacca
     8701 gtccgcaccg ccgtaaagca gccagtcttt cggcgcggaa tacatcagcg tcgcgcccgc
     8761 cagcggcata tggctgtcgt atcgggcggc ggtgcggtct tcctgataac gcttccacat
     8821 attgcccacg ttcagcgtca gccgccagcg ttcgctcaag cgtcgggaga aatcggcatt
     8881 gaagccgccg acgaaattgt atcggctgcc gcctaagagg ttttgcccga taaacggcac
     8941 gatgccgaac gagcgcgtta ccgaacgatt tttatagccg agcgacaggc gcaggcactg
     9001 ttcgctgaaa tctttgttat cccaataatg cacgccgccg ccgctgatgc cgccgtagag
     9061 gaaatgatgc ccgcccgcat tgatttcgcg cgacacgcct aagccctagc gcaaaccgtg
     9121 tgccttttgc ggcaggctgt cggcggtttt cgtccagctt ctgcccgcaa attcaatcgt
     9181 ttttttggac gaagcgttgt ttatag
//
LOCUS       DAWITQ010000072         9204 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.072, whole genome shotgun sequence.
ACCESSION   DAWITQ010000072 DAWITQ010000000
VERSION     DAWITQ010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9204)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9204)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9204
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.072"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(105..299)
                     /locus_tag="WIX18_001271"
     CDS             complement(105..299)
                     /locus_tag="WIX18_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HEZ5238378.1"
                     /translation="MKHKLASWWKTIKLTANLMAGVPDYENYVAQQRKHNPNAPVMTK
                     LQFQDYCRKRRCGANGGRCC"
     gene            complement(289..2370)
                     /locus_tag="WIX18_001272"
     CDS             complement(289..2370)
                     /locus_tag="WIX18_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HEZ5238379.1"
                     /translation="MKSLKTFLIWGIVVLVGLASFTTLALSRGEQVSAVWMVTAAISV
                     YCIAYRFYSLYIANRVMRLDPNRLTPAERHNDGLDYVPTHKGVLFGHHFAAIAGAGPL
                     VGPVLAAQMGYLPGTLWIIFGVVFAGAVQDMMVLFVSMRRDGKSLGDIVKQELGTVPG
                     VIASIGILMIMVIIMAVLALIVVKALVHSPWGTFTIAATMPIALFMGIYTRYIRPGKI
                     GEISIVGFILLMLAVIYGEDVAKSSIGHWFDLDGIQLTWAIMIYGFVASVLPVWLLLT
                     PRDYLSTFLKIGTIAALALGIVIVNPALQMPAVTHFIDGSGPVFSGALFPFLFITIAC
                     GAVSGFHALISSGTTPKMLENETHVRMIGYGGMLMESFVAIMALAAAASLDPGVYFAM
                     NSPAALIGTDANTAAEVITTKLQFPVDAATLLHTAKEVGENTILSRAGGAPTLAVGMA
                     HIMSRLIPGEAMMAFWYHFALLFEALFILTAVDAGTRVARFMIQDLGSIFYKPFGNTD
                     SIPANLIATFFAVALWGYFLYTGVTDPLGGINSLWPLFGIANQMLAGVALIMCAVVLI
                     KMKRDRYVWVVLVPAVGVLFVTCYAGLQKLFHSDPRISFLAHAGKYSDALAKNEILAP
                     AKDIGEMAQIIFNDKINAGLTILFLSVVVIVAAYGLRTALKARKVGWPTAKEIPAVYR
                     DGKQPEAQSEA"
     gene            2847..3227
                     /locus_tag="WIX18_001273"
     CDS             2847..3227
                     /locus_tag="WIX18_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MliC family protein"
                     /protein_id="HEZ5238380.1"
                     /translation="MNIRFFALTVPVLSLAACAVPEAYDDGGRGHMPPVQNQAGTDDF
                     RAFSCENGLSVRVRHLDSGKVALRLDGRRAVLSSDVAASGERYTAEHGLFGNATEWHQ
                     KGGEAFFGFTDAYGNSVETSCRAR"
     gene            complement(3360..3854)
                     /locus_tag="WIX18_001274"
     CDS             complement(3360..3854)
                     /locus_tag="WIX18_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CdiI family contact-dependent growth inhibition
                     immunity protein"
                     /protein_id="HEZ5238381.1"
                     /translation="MIFKQNQNYWTVFYTNEEALIVQTCSGLGLTAIDHLYPPHILPL
                     DTDNETLGTTVLQALANSRTFVYDSPEDQDFFDTEKIRQRYEDWVAKLCGNLGYKTRR
                     ALFKNMMSVDIWLHNGCLKISPSRHVKLEAWDAIDADDVILSLDNSPEEIGAGLKLAL
                     SRCR"
     gene            4178..5611
                     /locus_tag="WIX18_001275"
     CDS             4178..5611
                     /locus_tag="WIX18_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEZ5238382.1"
                     /translation="MNEYYQLIKHPDISLSPISDGIGVGNPATGETLAYVRNTGSDKL
                     KNLIQKAAAAQKLWAAKTALERADILWRWYFLIKENKEKLARIMTMEQGKSLTESRGE
                     IDYAASFVRWFAEEARRIDGDVLTSVKASQKLVVLKQPVGVTAAITPWNFPSAMIARK
                     AAPALAVGCAMIVKPASLTPLSAYALVVLAYEAGVPQDLLPVVSGSASEIGREFATNP
                     IIRKISFTGSTEVGAKIFADSAADIKKLSLELGGNAPFIVFDDADLDKAVEGALASKF
                     RNSGQTCVCTNRVYAQSGIYDAFCRKLSEKAAALKLGNGLEDGVNQGPLIEEKAVEKV
                     EQHIADALLKGAVCLTGGKRSALGGTFFEPTVLSGVTAQMAVAREETFGPLCPVFRFE
                     TEAEVIEAANNTEYGLAAYLFTADTARQWRVGEALEYGMVGINTGLISNEAAPFGGVK
                     RSGLGREGSKYGADEYLELKYLCMDVG"
     gene            5720..6508
                     /locus_tag="WIX18_001276"
     CDS             5720..6508
                     /locus_tag="WIX18_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimb protein"
                     /protein_id="HEZ5238383.1"
                     /translation="MMENGKTVPRWRFALKSAGWHLLISLSVAGLAALLVFKVWYPYP
                     YAELTGGLSLYQLVVAVDIVCGPLLTLILASPKKKTKARMVDFSMVGIIQLAALVYGL
                     HSVSLARPVIEAFEKDRINVVTAAEVAVEDLHKAPEGLQSLSWFGIRRIALKEPEDAD
                     EKNKTLDLSLKGIEPSMRPDRWLPYSDKEAEKIRKHLKPLKVLADARKTTVADILKQA
                     GLAEGEELYYLPFTSSRQKEWIVITDKEGNTKGYAPIDGFIITP"
     gene            6876..8432
                     /locus_tag="WIX18_001277"
     CDS             6876..8432
                     /locus_tag="WIX18_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEZ5238384.1"
                     /translation="MDFSWLAEPHTWIGFATLLVLEVVLGIDNLVFVAILANKVQPAR
                     RDRARIIGLGLAVVIRIIMLAFMAHIITLTEPLFQIGGLAVSGKDMIMLAGGIFLLYK
                     ATTELHERLEGHNRFTVADNQKKHAPFWGVVAQILILDAVFSIDSVITAVAMVDHIVV
                     AMGAVVVAMAVMISASKLLTEFVDRHPTVVMLCLGFLLMIGFSLIAEAFHFHIPKGYL
                     YAAIGFSILIELFNQISQRNSRKNDYIGSSWRKRTAENVLGMMGIRESVLADTGGESG
                     DDAHFEENEKSMIRSVLTLAERPIMGVMIPRRDIERLDISQSREEQCAQLQNTPYSRL
                     LVVGKAGVDEPLGYINKKDLLSQLLETGGLDIQTALRQPLVLPDGTTALGALELFRQS
                     SADYALVVDEFGAVLGMVTMKDLLETIAGEFPEEFEREEEPAVQGNPDESLTVEGALE
                     YVELASQLNLPQQEEDADFHTVAGLIMEELQTIPDVGDFADFHGWRFEVVEKEGQRIE
                     RVKITKLPEE"
     gene            8449..9195
                     /gene="surE"
                     /locus_tag="WIX18_001278"
     CDS             8449..9195
                     /gene="surE"
                     /locus_tag="WIX18_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HEZ5238385.1"
                     /translation="MNVLISNDDGYLSEGIAVLARVTAEFANVRVVAPERDRSGVSNS
                     LTLERPLQLKQAQNGFYYVNGTPTDCIHIGQSVFSDFQADFVFSGINRGANMGDDTLY
                     SGTVAAATEAYLMGIPAVAFSLNDASGRYWATAEKALWTLLAHFFKTPPQFPILWNIN
                     IPAVAPEDVRGIKIARLGRRHHGQNVIPARNPRGEQIYWIGPVGRVSDKEEGTDFGEC
                     GAGFITVTPLQIDLTAYPDMAETAVFWHAD"
BASE COUNT         2153 a         2309 c         2614 g         2128 t
ORIGIN      
        1 gtactgtctg cggcttcgcc gccttgtcct gatttttgtt aatccactat attataaaaa
       61 ttccgtctga agtggcgttc agacggaatt tgtttcaagc aggcttaaca gcagcgtccg
      121 ccgtttgcgc cgcaacggcg cttgcggcag tagtcttgaa attgcagctt ggtcatcacg
      181 ggggcgttgg gattatgttt gcgctgctgt gcaacgtagt tttcataatc aggcacgcct
      241 gccatcaagt ttgccgtcag cttgatggtt ttccaccaag acgcgagctt atgcttcact
      301 ttgtgcctcc ggctgcttgc cgtcgcggta caccgccggg atttctttgg cggtcggcca
      361 gccgactttg cgtgctttga gggcggtacg caaaccgtac gcggcgacaa tcacgacaac
      421 cgacaagaag aggatggtca gaccggcatt aatcttgtcg ttgaagatga tttgcgccat
      481 ttcgccgatg tctttggcag gcgcaaggat ttcgttttta gccaatgcgt cgctgtattt
      541 gccggcgtgg gcaaggaagc tgatgcgcgg gtcgctgtgg aacagttttt gcaggccggc
      601 gtagcaggtt acgaacagta cgccgacggc gggaacgagt accacccaga cataacggtc
      661 gcgtttcatc ttaatcagca ccacggcgca cataatcaag gctacgcctg ccagcatttg
      721 gttggcgatg ccgaacaaag gccagagcga gttgatgccg cccaacgggt cggtcacgcc
      781 cgtgtagagg aagtagcccc acaatgccac ggcgaagaag gtcgcaatca ggttggcggg
      841 gatggagtcg gtgttgccga aaggtttgta gaagatgctg cccaagtctt gaatcataaa
      901 acgtgcgacg cgcgtaccgg catcgacggc ggtcaggatg aacaaggctt caaacaatag
      961 ggcgaagtga taccagaacg ccatcatcgc ctcgcccgga atcaggcggc tcataatgtg
     1021 cgccataccg actgcgaggg tgggcgcacc gcctgcacgg gaaaggatgg tgttttcgcc
     1081 cacttcctta gcggtgtgca acagggttgc cgcatcgaca gggaattgca gcttggtggt
     1141 aatcacttcg gcggcggtat tggcatccgt accgatcagg gcggcagggc tgttcatggc
     1201 gaagtacacg ccgggatcaa gcgatgcggc ggcggcaagc gccataatgg ctacgaaact
     1261 ttccatcaac ataccgccgt aaccaatcat acggacgtgg gtttcgtttt ccagcatttt
     1321 cggcgtggtg ccggaggaaa tcagcgcgtg gaagcccgaa accgcaccgc aggcgatggt
     1381 gatgaagagg aacgggaaca atgcgcctga gaataccgga cccgaaccgt cgataaagtg
     1441 ggttacggca ggcatttgca aagcgggatt gacgatgacg atgcccaaag ccaaggccgc
     1501 aatcgtaccg attttcagga aggtggagag atagtcgcgc ggagtgagca gcaaccatac
     1561 gggcaatacg gaggcgacaa agccgtaaat cataatcgcc caagtgagct ggatgccgtc
     1621 aaggtcgaac caatgtccga tggaactttt cgccacatct tcgccgtaaa ttaccgccag
     1681 catcagcaaa ataaagccga cgatggaaat ctcgccgatt ttgcccggac ggatatagcg
     1741 cgtgtaaata cccataaaca gggcaatcgg catagtggcg gcgatggtga acgtacccca
     1801 agggctgtga accagtgctt ttacgacaat caacgccaac accgccataa tgatgaccat
     1861 aatcatcaaa ataccgatgg aggcaatcac gccggggaca gtgccgagtt cctgtttcac
     1921 aatatcgccc aaagacttac catcgcggcg catagagacg aacaagacca tcatatcctg
     1981 taccgcgccg gcaaatacca cgccgaagat aatccacaaa gtaccgggca ggtaacccat
     2041 ttgcgccgcc aaaaccgggc cgaccaaggg gcccgcgccc gcaatcgcgg caaagtggtg
     2101 tccgaacaat acgcccttgt gcgtcggaac gtagtccaag ccgtcgttgt ggcgttctgc
     2161 cggagtcagg cggttaggat cgagccgcat cacgcggttg gcgatgtaga ggctgtaaaa
     2221 acggtaggcg atgcagtaaa cggatatggc ggcggtgacc atccataccg cgctgacctg
     2281 ttcgcctcgg ctgagggcca gagtggtaaa ggatgctaag ccgaccagta ccactatgcc
     2341 ccaaatgagg aaggttttga gtgatttcat cgaataaatc cttatctcac actgtcggaa
     2401 tatgcctgaa cggcgggaaa cggccgaacc atctgccggc acgggcacaa accggagtct
     2461 gaatgattga cgaagtatga aacagtgcgc ttgtcgggat ttgtgcctta tgcccgcatc
     2521 aaacagtgca gggatgcggg cgcacaaaac gttaaacgcc gaatatgatt ttaacgcaaa
     2581 ttagcacact gatagcggtt tttacttgga atttggaaaa aatttacatt cctccgtgcg
     2641 gacagggagg ttcagacggc atcgtcaggc aaaaggcggc gccggaagac gggtaaagaa
     2701 ggggcgcgca atccggatta ttgattcatc gcgggtaaat tctggttatc gggcttgtgt
     2761 gtttgcgcgt ccgtttatag tatggcgttg ccgcagcttg gaatcagggc ggttgtttca
     2821 tatcttattt ttattgggga gcttttatga atatcaggtt tttcgcgctg accgtaccgg
     2881 ttttgtcttt ggcggcctgt gccgtgccgg aggcgtatga tgacggcgga cgagggcata
     2941 tgccgcctgt tcaaaaccaa gccggcacgg acgattttcg ggcgttttcc tgcgagaacg
     3001 gtttgtctgt gcgggtccgc catttggaca gcggcaaagt cgcgttgcgg ctagacggca
     3061 ggcgtgccgt cctctcttcc gacgttgccg catccggaga acgctatacc gccgaacacg
     3121 gtttgttcgg aaacgcaacc gagtggcacc agaaaggcgg cgaagccttt ttcggcttta
     3181 ccgatgccta cggcaattcg gtcgaaactt cctgccgcgc ccgttaaacg gggcagcctg
     3241 tttgaaccgc cgtccggatt tttcgggcgg ttttttgtac cggttttgtt ttggccgtcg
     3301 gctggttccg gcggttttcg ggcgtggcgg attatttttc gttttgttcc gggtttattc
     3361 tatcggcagc ggctcaatgc caactttaaa cctgctccga tttcttcagg gctgttatcc
     3421 aatgataaaa tgacatcgtc tgcatcaatg gcatcccacg cttccagctt gacatggcgg
     3481 ctcgggctga ttttcaggca gccgttgtgc agccaaatat ccacgctcat catgttttta
     3541 aatagggcgc gtctggtttt atagcccaag ttcccgcata gcttggcaac ccaatcctca
     3601 tagcgttgcc gaattttttc ggtatcaaaa aaatcttggt cttctggact gtcataaacg
     3661 aaagtcctgc tgtttgccaa tgcttgcaag accgttgtgc ctaaagtttc attgtcggta
     3721 tccaatggca ggatatgagg gggatatagg tggtctattg ccgttaatcc caaacctgaa
     3781 catgtttgaa caatcagagc ttcttcattc gtataaaaaa ctgtccaata attttgattc
     3841 tgtttaaaaa tcattatttt atctccgtaa ttttgactat aatgtttgga tttttgccat
     3901 actctaccac acgttgcaac tgcaatcttt gttccttata tattattaaa gggctgcatt
     3961 acttttcttt ctaaattacc attgtataaa aagtattttt cttaaacgac agggattgcg
     4021 cccgcgccat attcagacac cgcccggatg ttgcgctgcc cgatcggatg cttcagacgg
     4081 catcggaagg gtttgcagtt ttggaatatg aagatgataa tgtccgcgag attgacggca
     4141 tttgaaagcg gttattccgc ataccggagg atacgaaatg aacgaatatt accaattaat
     4201 caagcatccc gatatttccc tttccccgat ttcagacggc atcggggtcg gcaatccggc
     4261 gacgggcgag actttggcgt atgtccgcaa tacgggttcg gacaaactga aaaacctgat
     4321 tcaaaaagca gctgcggcac aaaaattatg ggcggcaaaa accgctttgg aacgcgccga
     4381 catattgtgg cgttggtatt ttttgattaa agaaaacaaa gaaaaactgg cgcggatcat
     4441 gacgatggag cagggtaaaa gcctgactga gtcgcgtggt gaaatcgatt atgcggcttc
     4501 gtttgtgcgc tggtttgccg aagaagcgcg gcggattgac ggcgatgtgc tgacgagtgt
     4561 gaaagcgtcg caaaaactgg ttgtgttgaa acagcctgtc ggcgttaccg ctgcgattac
     4621 gccgtggaac ttcccatctg caatgattgc gcgcaaggct gcgcctgctt tggcggtggg
     4681 ctgcgcgatg atcgtcaaac ccgcatcgct cacgccttta agcgcgtatg cgttggtcgt
     4741 gctggcttat gaagcgggcg tgccgcagga tttgctgccc gtcgtcagcg gcagtgcatc
     4801 ggaaatcggc cgtgaatttg ccacgaaccc gattatccgc aaaatcagct tcaccggctc
     4861 taccgaagtc ggtgcgaaaa tttttgccga cagcgcggcg gacattaaaa aactcagttt
     4921 ggagctgggc ggcaacgcgc cgtttatcgt gtttgacgat gccgatttgg acaaagccgt
     4981 cgaaggtgcg ctcgccagca agttccgcaa cagcggtcag acctgcgtct gcaccaaccg
     5041 cgtttacgcc caatcgggca tttacgacgc attttgccgc aaattgagtg aaaaagcagc
     5101 cgcgctcaaa ttgggcaacg gcttggagga tggcgtaaac caagggccgc tgattgagga
     5161 aaaagcggtg gagaaagttg agcagcacat cgccgacgcg ctcttaaaag gcgcggtctg
     5221 tctgaccggc ggcaaacgca gcgcgttggg cggaacgttt tttgagccga ccgtcttaag
     5281 cggcgtaacg gcgcaaatgg cggtagctcg cgaggaaacc ttcgggcctt tgtgtccggt
     5341 attccgtttt gaaaccgaag ccgaggtcat cgaggctgcg aacaatacgg aatacggttt
     5401 ggcagcttac cttttcaccg ccgacaccgc ccgccaatgg cgcgtcggcg aagccttgga
     5461 atacggcatg gttggcatca atacgggctt aatcagtaat gaagcggcac cgtttggcgg
     5521 cgtgaaacgc agcggtttgg gacgtgaagg cagcaaatac ggtgcggacg aatatctgga
     5581 attgaaatat ctgtgtatgg atgtcgggtg acggatgccg tctgaacggc agggtttcag
     5641 acggcgccgc attttaagca gtctctatct gttgtacaat gcgccctgtt tttacggtta
     5701 tttttgattt gaacaagata tgatggaaaa cggaaaaaca gtcccgagat ggcgttttgc
     5761 cttgaaaagt gcgggctggc atctcttaat cagcctgtcg gttgcagggc tggcggcatt
     5821 gctggttttt aaggtttggt atccttatcc ttatgccgag ctgacgggag ggctgtcgct
     5881 ttatcagctg gtggtggctg tcgatattgt atgtggtccg ctgctgactt taattttggc
     5941 aagcccgaag aaaaagacaa aggcacgcat ggtcgatttt tccatggtcg gcatcatcca
     6001 gctggcggct ttggtgtacg gtctgcacag cgtttctttg gcgcgccctg tgatagaggc
     6061 gtttgaaaaa gacaggatta atgttgtgac cgccgccgaa gtggcggttg aagatttgca
     6121 caaagcgccg gaagggctgc aaagcctgtc gtggttcggc atccgccgca ttgcattgaa
     6181 agaacctgag gatgcggatg agaagaacaa gacgctggat ttgtccctga aaggtatcga
     6241 gccgagtatg cgtcccgacc ggtggctgcc gtattccgac aaggaagcag aaaaaatccg
     6301 caaacatctg aaaccgctga aagtcttggc ggatgcgaga aaaacgacgg ttgcggacat
     6361 tctgaaacag gcaggtctcg ccgaagggga ggagctgtat tacctgccgt ttaccagcag
     6421 caggcagaaa gagtggatag tcattaccga taaagagggc aacaccaaag gctacgcgcc
     6481 gatagacggc ttcatcatca ccccttaagc gttgggactc cgtccgcact cgaacatccg
     6541 ttcttcgcgg cggtagaatc agactgtatt tgagaggggc gcaacccctc aatcagggca
     6601 acacataggg gaaggcttta tgtgccgtcc gtgtgttgaa acatttcaaa ataagctcat
     6661 gccgtccgaa catcctttca gacggtatgg cattttgcca ttgccccgat aagctgttaa
     6721 actatttaaa ttatttcgac cgaaggtaca cgcacatgaa agaccccgag cagagcagca
     6781 agcccgcccg ccgttttttg tgcgtaccgt ctgttcaggc agcttgagcg cttcaggctg
     6841 ccttttcgcg tttgaacttg aggaatacga aaatcatgga tttcagttgg ttggcagaac
     6901 cgcatacctg gataggtttt gccacgcttt tggtgttgga agtcgtattg gggatagaca
     6961 accttgtctt tgtggcgatt ttggcaaaca aggtccagcc cgcacggcgc gaccgcgcac
     7021 ggattatcgg gctggggctg gcagtcgtca tccgcatcat tatgcttgct tttatggcgc
     7081 acatcatcac gctgaccgag ccgctgttcc aaatcggcgg cctcgccgtt tccggcaagg
     7141 acatgattat gctcgcgggc ggtattttcc tgctttacaa agccaccacc gaactgcatg
     7201 aacgcctcga agggcacaac cgttttactg ttgccgacaa ccaaaaaaaa cacgcgccgt
     7261 tttggggcgt ggtcgcgcaa atcctgatac tggatgccgt gttttccatc gattcggtca
     7321 ttactgcggt ggcgatggtc gatcatatcg tcgtggcgat gggtgcggtc gtcgtcgcaa
     7381 tggctgtaat gatttctgcc agcaaactct tgaccgaatt tgtcgacaga caccctaccg
     7441 tcgtgatgct ctgccttggt tttttgttga tgatcggttt cagcctgatt gccgaagcct
     7501 tccatttcca cattcccaaa ggctacctct acgccgccat cggcttctcg attttaatcg
     7561 aactgtttaa ccagatttcc cagcgcaaca gccgcaaaaa cgactacatc ggcagctcgt
     7621 ggcgcaaacg gactgctgaa aacgttttgg gtatgatggg catacgcgaa agcgtgcttg
     7681 ccgacacggg cggcgaatcc ggggacgacg cgcattttga agaaaacgaa aaatcgatga
     7741 tacgcagcgt gctgacgctt gccgaacgcc cgattatggg ggtgatgatc ccacgccgcg
     7801 acatcgaacg gctggacatt tcccaaagcc gcgaagaaca gtgtgcccaa ctgcaaaaca
     7861 cgccttacag ccgcctgctc gttgtcggaa aggcgggcgt ggacgaacct ttgggctaca
     7921 tcaacaaaaa agacctgctg tcccaactgc tggaaacagg cggtctcgac attcagacgg
     7981 cattgcgcca gccgctcgtc ctacccgacg gcacgaccgc cttgggcgcg ctcgaactct
     8041 tccgccaaag cagcgcggat tatgctttgg tggtggacga gttcggcgcg gtattgggca
     8101 tggtaaccat gaaagacctg ctcgaaacca tcgcaggcga gttccccgaa gaatttgagc
     8161 gcgaagaaga accagccgtt caggggaatc ccgatgaaag cctgacggtg gaaggcgcgt
     8221 tggaatatgt ggagctggca tcccaactca atctgccgca gcaggaggaa gatgccgatt
     8281 tccatacggt tgccgggctg attatggaag aattgcaaac catccccgat gtcggcgatt
     8341 ttgccgattt ccacggctgg cggtttgaag tggtcgaaaa agaagggcag cgcatcgagc
     8401 gggtcaaaat caccaaattg cccgaagaat aagcattcag gatagaaaat gaacgttttg
     8461 atttccaacg acgacggcta cctctccgaa ggtattgccg ttttggcgcg cgttacggcg
     8521 gaatttgcca acgtcagggt ggttgcgccc gaacgcgaca ggagcggggt cagcaattcg
     8581 ctgacgctgg aacgcccttt gcagttgaaa caggcgcaaa acgggttcta ctatgtcaac
     8641 ggcacgccga ccgactgcat ccacatcggg cagtctgtat tttcggattt tcaggccgat
     8701 tttgtctttt cgggcatcaa ccggggcgcg aatatggggg acgacacgct ttattcgggg
     8761 acggttgcgg cggcaaccga agcctacctt atgggcatac ccgctgtggc gttttcctta
     8821 aacgacgctt ccggacgcta ttgggcaacc gcagaaaagg cactgtggac attgttggcg
     8881 cattttttca aaaccccccc gcagttccct attttgtgga acatcaatat ccccgccgtc
     8941 gcgccggaag atgtgcgggg cattaaaatc gcccgtttgg gcaggaggca tcacggtcag
     9001 aacgtcatcc ccgcgcgcaa tccgcgcggc gaacagattt attggatagg cccggtaggc
     9061 agggtttccg acaaagaaga gggaacggat ttcggtgaat gcggcgcagg tttcattacc
     9121 gtaacgccgc tgcaaatcga cctgaccgcc tatccggaca tggcggaaac agcggtgttc
     9181 tggcatgcgg actgaccgtt tcat
//
LOCUS       DAWITQ010000073         8936 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.073, whole genome shotgun sequence.
ACCESSION   DAWITQ010000073 DAWITQ010000000
VERSION     DAWITQ010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8936)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8936)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8936
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.073"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(319..1272)
                     /locus_tag="WIX18_001279"
     CDS             complement(319..1272)
                     /locus_tag="WIX18_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238386.1"
                     /translation="MHQYYDAVILSVGNGLLKRFFKQNAQLNIASRPLIITLFPGVVF
                     GDQASILSRMGADIVLYNNKHDFRIAEEYKKQYKLSCQNILYGYPIFRHASKGRHGEK
                     IYFIDQVKIPFKKEERIYTLKKLIALAEKYPEKEFTILLRVADKDITVHQDKHSYIEL
                     AKQFQLPSNLTIERKSTAQAFQEMGYCLSYSSTMLFEAECKGIPVGVVADLGFSKSYA
                     NQHFLGSGVLVYFDQIDFTSPKIADPDWLDCYATKKVITTDEFNKLLKQVVPLQHDYQ
                     EYLSAVNSIESTKTIFLRKFKKLIRDPKKFFYDSKWLRKVI"
     gene            1655..2674
                     /gene="galE"
                     /locus_tag="WIX18_001280"
     CDS             1655..2674
                     /gene="galE"
                     /locus_tag="WIX18_001280"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEZ5238387.1"
                     /translation="MKKILVTGGTGFIGSHTVVSLLKSGHQVVILDNLCNSSINILPR
                     LKTITGQEIPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYDNNV
                     SGSLVLAEEMARAGVFKIVFSSSATVYGDPGKVPYTEDMPLGDTTSPYGTSKSMVERI
                     LTDIQKADPRWSVILLRYFNPIGAHESGLIGEQPNGIPNNLLPYICQVAAGKLPQLSV
                     FGDDYPTPDGTGMRDYIHVMDLAEGHVAAMKAKGGVAGVHLFNLGSGRAYSVLEIIRA
                     FEAASGLTIPFEIKPRRAGDLACFYADPSYTKAQIGWQTQRDLSQMMEDSWRWVSNHP
                     NGYDD"
     gene            2790..3857
                     /gene="rfbB"
                     /locus_tag="WIX18_001281"
     CDS             2790..3857
                     /gene="rfbB"
                     /locus_tag="WIX18_001281"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HEZ5238388.1"
                     /translation="MRKILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESL
                     TDIADNPRYAFEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNI
                     VGTFNLLEAARAYRQQMPSEQHEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPY
                     SASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYG
                     DGMQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPE
                     KPAGVARYEDLITFVQDRPGHDVRYAIDTAKISRELGWKPQETFESGLHKTVQWYLDN
                     KTWWQNVLNGSYRLERLGTGK"
     gene            3920..4786
                     /gene="rfbA"
                     /locus_tag="WIX18_001282"
     CDS             3920..4786
                     /gene="rfbA"
                     /locus_tag="WIX18_001282"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HEZ5238389.1"
                     /translation="MKGIILAGGSGTRLYPITRGVSKQLLPVYDKPMIYYPLSVLMLA
                     GIRDILVITAPEDNASFKRLLGDGSDFGISISYAVQPTPDGLAQAFIIGEEFIGNDNV
                     CLVLGDNIFYGQSFTQTLKQAAAQMHGATVFAYQVKNPERFGVVEFNENFRAVSIEEK
                     PQRPKSDWAVTGLYFYDNRAVEFAKQLKPSARGELEISDLNQMYLEDGSLSVQILGRG
                     FAWLDTGTHESLHEAASFVQTVQNIQNLHIACLEEIAWRNGWLSDEKLEELARPMAKN
                     QYGQYLLRLLKK"
     gene            4840..5397
                     /gene="rfbC"
                     /locus_tag="WIX18_001283"
     CDS             4840..5397
                     /gene="rfbC"
                     /locus_tag="WIX18_001283"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HEZ5238390.1"
                     /translation="MNIIDTAIPDVKLLEPQVFGDARGFFMETFRDGWFKENIADCSF
                     VQENHSKSGKGVLRGLHYQTENTQGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLS
                     AQNQCQLWIPEGFAHGFYVLSDTTELTYKCTDYYKPEAEQVLIWNDPAIGIGWPLQTA
                     PLLSPKDLAGKTWAQAEKLRLTLSR"
     gene            complement(5441..7459)
                     /locus_tag="WIX18_001284"
     CDS             complement(5441..7459)
                     /locus_tag="WIX18_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HEZ5238391.1"
                     /translation="MNKSLSGSVEEYRELTLRGMILGALITVIFTASNVYLGLKVGLT
                     FASSIPAAVISMAVLKFFKGSNILENNMVQTQASAAGTLSTIIFVLPGLLMAGYWSGF
                     PFWQTTLLCIAGGILGVIFTIPLRYAMVVKSDLPYPEGVAAAEILKVGGHEEGDNRQG
                     GSGIKELAAGGALAGLMSFCAGGLRVIADSASYWFKSGTAIFQLPMGFSLALLGAGYL
                     VGLTGGIAILLGISIAWGIAVPYFSSHIPQPSDIEMAAFAMKLWKEKVRFIGAGTIGI
                     AAVWTLLMLLKPMVEGMKMSFKSFGGGAPATERAEQDLSPKAMIFWVLSMMFILGVSF
                     YHFIGDSHITGGMAWLLVVVCTLLASVIGFLVAAACGYMAGLVGSSSSPISGVGIVSI
                     VVISLVLLLVGESGGLMADEANRKFLLALTLFCGSAVICVASISNDNLQDLKTGYLLK
                     ATPWRQQVALIIGCIVGALVISPVLELLYEAYGFTGAMPREGMDAAQALAAPQATLMT
                     TIASGIFAHNLEWVYIFTGIAIGAVLIAADLVLKKSSGGKLALPVLAVGMGIYLPPSV
                     NMPIVAGAVLAAVLKHIIGKKAENREGRLKNAERIGTLFSAGLIVGESLIGVIMAFII
                     AFSVTNGGSDAPLALNLQNWDAAASWLGLAFFVTGMFFFAQRVLKAGR"
     gene            complement(7655..8776)
                     /gene="dnaJ"
                     /locus_tag="WIX18_001285"
     CDS             complement(7655..8776)
                     /gene="dnaJ"
                     /locus_tag="WIX18_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEZ5238392.1"
                     /translation="MSNQDFYATLGVARTATDEEIKKAYRKLAMKYHPDRNPDNKEAE
                     EKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQ
                     MFGGGSGRAQPDYQGEDVQVGIEITLEEAAKGVKKRINIPTYESCDVCNGSGAKPGTS
                     PETCPTCKGSGTVHIQQAIFRMQQTCPTCHGAGKHIKEPCVKCRGAGRNKAVKAVEVN
                     IPAGIDDGQRIRLSGEGGPGMHGAPAGDLYVTVRIRAHKIFQRDGLNLHCELPISFAT
                     AALGGELEVPTLDGKVKLTVPKETQTGRRMRVKGKGVKSLRSSATGDLYCHIIVETPV
                     NLTDRQKELLEEFERISTGLENQTPRKKSFLDKLRDLFD"
BASE COUNT         2418 a         2331 c         1966 g         2221 t
ORIGIN      
        1 ggctgcattt ctcaatgtaa aacgcgatat tttcacccat tattagggat aagtagccag
       61 tggtttacac tggctacttt catagttatg aagtactggg tctgagtgaa ttcaattatt
      121 tccgtataaa acacagtaga cattttacta atcggcaaaa ttatattaga agaattgaga
      181 actactgaag tcaggtaaga taccattttg cacaaattta acggcatccc taaaaagcat
      241 tttgggtggt atttaaagga gtacaaaatg gttttaacta cagtatgctt agaaatctat
      301 agccttacgc gctttatatt aaatcacctt tctcaaccat ttagaatcat aaaaaaactt
      361 tttaggatcc ctaattaact ttttaaattt tcttaaaaaa atagttttag ttgattctat
      421 actattcacc gcagataaat attcttggta atcatgttgc aatggcacaa cctgctttaa
      481 tagcttatta aactcatcag ttgtaatcac ctttttagta gcatagcaat caagccaatc
      541 cggatctgct atttttgggg aagtgaaatc tatttgatca aaataaacta aaaccccact
      601 acctaaaaaa tgctgatttg cataggattt agaaaagcct aagtctgcaa caacaccaac
      661 agggataccc ttacattcag cttcaaaaag catagtagat gaataagata aacaataccc
      721 catttcttgg aaggcttgcg cggtactttt tcgctctatt gtcaaattac tcggcaactg
      781 aaactgcttt gccagctcta tatacgaatg tttatcctga tgcacagtaa tatctttatc
      841 tgcaaccctt agcaaaatag taaattcttt ctcagggtat ttttcagcca aggcaatcaa
      901 tttttttaat gtataaattc tttcttcttt tttaaatggg attttaactt ggtcaataaa
      961 gtaaattttc tctccatgac gaccttttga tgcgtggcga aaaattggat aaccataaag
     1021 tatattttga caacttaatt tatattgttt cttatattcc tctgcaattc taaaatcatg
     1081 cttattatta tataaaacaa tatcagcccc catacgagat agaatacttg cctgatcacc
     1141 gaatactaca cctggaaaca aggtaataat caatggcctt gaagcaatat ttaattgcgc
     1201 attctgctta aagaaccttt ttaacaaccc atttccaacc gataaaatta ctgcgtcata
     1261 atattgatgc atattcttaa taaagtaatc atcaatatga aaaaaaaaat tgcttggtct
     1321 ttatctatcc ctgattctaa taactgtcga tttgaaagaa tgttttctcg acttttgtgg
     1381 atataaatat caatttgagc atcttttatc tcttttgcaa cagcatagcc cgagttaagg
     1441 aacgagtcat aactggcaat tagtaatact tttttcacta ttttccctta attctacacc
     1501 atatgaataa aattatagta ttttacctta gatatcaaat atacttaacc aaaaaaatct
     1561 gaagaaatct actgctactt cagggataat tatttcatta agattttaca accattatta
     1621 tcaatctatc aaagtatttt tagtatttta ttctatgaaa aaaattctcg ttaccggcgg
     1681 caccggtttt atcggctcgc ataccgttgt ttctttgctg aaaagcggcc atcaagtcgt
     1741 gattttggat aacctatgca attccagcat caatatcctg ccacgcttga aaacgattac
     1801 cggccaagag attccgtttt atcaaggcga tatccgcgat cgtgagattt tgcgccgtat
     1861 ttttgcggaa aaccgcattg attcggtgat tcattttgcc ggcttgaaag cggtgggtga
     1921 aagtgtggcc gagccgatga aatattatga taataatgtt tccggcagct tggtgttggc
     1981 ggaagaaatg gcacgtgccg gcgtatttaa gattgtgttc agctcatcgg ctacggttta
     2041 tggcgatccg ggcaaagtgc cttataccga ggatatgcca ctgggcgata ccaccagccc
     2101 ttacggcaca tcgaaatcaa tggttgagcg cattctcact gatattcaaa aagccgatcc
     2161 gcgctggagc gtgattttgt tgcgttattt caatccgatt ggcgcgcacg aaagtggttt
     2221 gattggcgag cagccaaacg gcatcccgaa taatttgttg ccttatatct gccaagtggc
     2281 ggcaggcaaa ctgccgcagt tgtcggtttt cggcgatgac taccctaccc cagacggtac
     2341 gggtatgcgc gactatatcc atgtaatgga tttggcggaa ggccatgtcg cggcaatgaa
     2401 ggcaaaaggc ggcgttgccg gcgtacattt gttcaacttg ggttcggggc gcgcctattc
     2461 cgttttggaa atcatccgcg catttgaagc ggcttcgggt ttaaccattc catttgaaat
     2521 caaaccacgc cgtgcgggcg atttggcgtg tttctatgct gacccttctt atacgaaggc
     2581 acaaatcggt tggcaaactc agcgtgattt aagccaaatg atggaagatt catggcgctg
     2641 ggtaagtaat catccgaatg gctacgacga ttaagttgac ctgatacagg ccgtctgaaa
     2701 gagatgtttt cagacggcct ctttatctga aaaacacaca ttctgtctgc tataatctgt
     2761 ttatattttt tggctatcct ctgaaattta tgagaaaaat ccttgttacc ggcggcgcgg
     2821 gctttatcgg ttctgccgtt gtccgtcata ttatccgaaa cacccaagat tccgtcgtca
     2881 acctcgacaa actgacctac gcgggcaatc tcgaatcgct gaccgacatt gccgataatc
     2941 cccgctatgc tttcgagcaa gtggacattt gcgaccgcgc cgaactcgac cgcgtattcg
     3001 cacaacaccg gcccgatgcc gtgatgcact tggcggcgga aagccatgtc gaccgctcta
     3061 tcggttcggc aggcgagttt atccaaacca atatcgtcgg cacattcaat ctgcttgaag
     3121 cagcccgcgc ctaccggcaa caaatgccgt ctgaacagca cgaagccttc cgtttccacc
     3181 atatttccac cgatgaagtc tatggcgatt taggcggcac ggacgatttg tttaccgaaa
     3241 ccgcgcccta cgcgccgtcc agcccctact ctgcctctaa agcgtccagc gaccacctcg
     3301 tccgcgcgtg gttgcgtact tacggcttgc cgaccattgt aaccaactgc tccaacaact
     3361 acggtcctta ccattttccg gaaaaactca ttcctttgat gattctgaac gcgcttgacg
     3421 gcaaaccgct gcctgtgtac ggcgacggta tgcaaatccg cgactggctg tttgtcgaag
     3481 accacgcgcg cgcactgtat caggttgtta ccgaaggtgt tgtcggcgaa acctacaata
     3541 tcggcggcca caatgaaaaa gccaatattg aagtcgtcaa aaccatctgc gccctgctgg
     3601 aagaactcgc tcccgaaaaa ccggccggtg tggcgcgtta tgaagatttg attactttcg
     3661 tacaagaccg ccccggccat gacgtacgct acgccattga tacagccaaa atcagtaggg
     3721 aactaggctg gaaaccgcag gaaaccttcg agtccggcct ccacaaaacc gtgcaatggt
     3781 atctggacaa caaaacctgg tggcaaaacg tattgaacgg cagctatcgt ttggaacgct
     3841 taggtacagg caaatagttt tcagacggca tcccgacgca atgccgtctg aaaacccatc
     3901 gcaaaggaag aaagaaaaga tgaaaggcat catactggca ggcggcagcg gcacgcgcct
     3961 ctaccccatc acgcgcggcg tatccaaaca gctcctgccc gtgtacgaca aaccgatgat
     4021 ttattacccc ttgtcggttt tgatgctggc aggaatccgc gatattttgg tgattaccgc
     4081 gcctgaagac aacgcctctt ttaaacgcct gcttggcgac ggcagcgatt tcggcatttc
     4141 catcagttat gccgtgcaac ccactccgga cggcttggca caggcattta tcatcggcga
     4201 agaatttatc ggcaacgaca atgtttgctt ggttttgggc gacaatattt tttacggtca
     4261 gtcgtttacg caaacattga aacaggcggc agcgcaaatg cacggcgcaa ccgtgtttgc
     4321 ttatcaggtc aaaaaccccg aacgtttcgg cgtggttgaa tttaacgaaa acttccgcgc
     4381 cgtttccatc gaagaaaaac cgcaacggcc caaatccgat tgggcggtaa ccggcttgta
     4441 tttctacgac aaccgcgccg tcgagttcgc caaacagctc aaaccgtccg cacgcggcga
     4501 attggaaatt tccgacctca accaaatgta tttggaagac ggttcattgt ccgtccaaat
     4561 attaggacgc ggtttcgcat ggttggacac cggcacgcac gaaagcctgc acgaagccgc
     4621 ttcattcgtc caaaccgtgc aaaatatcca aaacctgcac atcgcctgcc tggaagaaat
     4681 cgcttggcgc aacggttggc tttccgatga aaaactggaa gaattggcgc gcccgatggc
     4741 gaaaaaccaa tacggccaat atttgctgcg cctgttgaaa aaataatgtt tgaggccgtc
     4801 tgaaactttt cagacggcct ttagatgaaa gataaaaaga tgaacatcat tgataccgcc
     4861 attcctgacg taaaactgct tgagccccaa gtcttcggcg acgcgcgcgg cttttttatg
     4921 gaaaccttcc gcgacgggtg gttcaaagaa aatattgccg actgttcctt tgttcaggaa
     4981 aaccactcca aatccggcaa aggcgtattg cgcggcctgc actaccaaac cgaaaacaca
     5041 caaggcaaac tcgtacgcgt agttgtcggc gaagtgttcg acgtggccgt cgatatgcgc
     5101 gaaggttcgc cgactttcgg caaatgggcg ggcgcaaccc tgtccgcgca aaaccaatgc
     5161 cagctttgga tacccgaagg cttcgcgcac gggttttacg ttttgagcga cacgaccgaa
     5221 cttacctaca aatgcacgga ctattacaag cctgaagccg aacaggtttt aatatggaac
     5281 gacccggcaa tcggcatagg ctggccgctt caaaccgcgc cgctgctgtc gcccaaagac
     5341 cttgccggca aaacgtgggc gcaagccgaa aagctccgcc ttacactttc ccgataaaaa
     5401 atgccgtctg aacgtttcag acggcatttt ctccgacagg ctacctaccc gccttcagta
     5461 cgcgctgtgc aaagaaaaac atcccggtaa cgaagaacgc caaacccaac caagaagcgg
     5521 cggcatccca gttttgcaga ttcaacgcga gcggcgcatc cgagccgccg ttggtcacgg
     5581 agaaggcaat aataaacgcc ataatcacac cgatcaggct ttcaccgaca atcaggccgg
     5641 cggagaacaa ggttccgatg cgctcggcgt ttttcagacg gccttcacgg ttttccgctt
     5701 ttttaccgat gatgtgtttc aacaccgccg ccaacaccgc gcctgccacg atgggcatat
     5761 tgacggacgg cggcagataa atacccatac cgaccgcaag gacgggcagg gcaagtttgc
     5821 cgcctgatga ttttttcaac accaaatcgg cggcaatcaa caccgcgcca atcgcgatgc
     5881 cggtaaagat atagacccat tcgaggttgt gggcgaaaat gcccgacgcg atggtcgtca
     5941 tcaaagtcgc ttgaggggct gccaaagcct gcgccgcgtc cataccttcg cgcggcattg
     6001 cgccggtaaa gccgtaggct tcgtaaagca gttccaacac gggtgaaata accagcgcac
     6061 cgacgataca gccgataatc agggcgactt gctgccgcca aggcgtggct ttgagcaggt
     6121 agccggtttt caggtcttgc aggttgtcat tggagatcga agccacgcag attactgccg
     6181 agccgcaaaa taaagtcagt gccagcaaaa atttgcggtt tgcctcatcc gccatcaaac
     6241 cgccggattc gcccaccagc agcaaaacca gcgaaatcac gacgatggaa acgatgccca
     6301 cgccggaaat cgggctggaa gacgagccga ccaaacccgc catataaccg caggcggcgg
     6361 cgaccaaaaa gccgatgacg gaagccaaaa gcgtgcaaac gaccaccaaa agccaagcca
     6421 tgccgcccgt aatgtgcgaa tcgccgataa agtggtaaaa cgacacgcct agaataaaca
     6481 tcatagacaa tacccagaaa atcatggctt taggcgacaa atcctgttca gcgcgttctg
     6541 tagcgggcgc accgccgcca aaactcttga acgacatctt catgccttcc accattggct
     6601 tgagcagcat caaaagcgtc caaaccgccg cgatacctat ggttcccgcg ccgatgaagc
     6661 gtactttttc cttccacagc ttcatcgcaa acgccgccat ttctatatcg gaaggctgcg
     6721 ggatgtgcga tgaaaaatac ggcacggcaa tgccccaagc aatcgaaatg cccaacagaa
     6781 tggcgatacc gcccgtcagt ccgaccaaat agcccgcgcc caacaatgcc agtgaaaagc
     6841 ccatcggcag ttggaaaatt gccgtaccgc ttttaaacca ataactcgcg ctatcggcaa
     6901 tcacacgcag acctccggcg caaaagctca tcaatcccgc caacgcaccg ccggccgcca
     6961 gctctttgat gccgctgccg ccctgacggt tatccccttc ttcatgaccg cccactttca
     7021 aaatttcagc agccgccaca ccttccggat aaggcaaatc gcttttcacc accatcgcgt
     7081 aacgcagcgg aatggtgaaa atcaccccca aaatcccgcc ggcaatacat aaaagcgtcg
     7141 tctgccagaa cgggaaaccg ctccagtagc ccgccatcag caaaccgggc aggacgaaga
     7201 tgatggttga aagcgtaccc gcagccgagg cttgggtctg caccatgttg ttttccaaaa
     7261 tattgctgcc tttgaaaaac tttaaaaccg ccatcgaaat caccgccgcc ggaatcgacg
     7321 aggcaaaggt cagcccgact ttcaaaccga ggtaaacgtt ggacgcagta aaaattacag
     7381 tgatcaatgc accgagtatc atgcctcgga gcgtcagttc gcggtattct tctaccgaac
     7441 cggataaaga tttattcatt attcttcctt tgacaacaga ttcccgcata ttgttggcaa
     7501 tatgtcataa tgtcaagttt taaaaagaac agttaaaaac agttatccaa tcctatctcg
     7561 tactcccttg aaaataaaaa ctattttcaa gcaaacaaaa acagtcgtat cagggagatt
     7621 ccccgatacg gccgcctgtt tacaagcctc aaaatcaatc aaacaaatcg cgcagcttgt
     7681 ctaaaaacga tttcttacgc ggtgtttgat tttccaaccc ggtagaaatc cgttcaaatt
     7741 cttctaaaag ctctttttga cggtcggtca aattaacagg tgtttcgacg ataatatggc
     7801 agtacaaatc gccggtcgcg ctgctgcgta aagatttgac tcccttaccc ttcacgcgca
     7861 tcctcctgcc ggtttgggtt tctttgggga cggtgagctt gactttgccg tccaaggtcg
     7921 gcacttccaa ctctccgccc agagccgccg tggcaaaact gatcggcagt tcgcaatgca
     7981 aattcaagcc gtcgcgttgg aaaatcttat gcgcccggat gcggacggtt acatacaaat
     8041 cgcctgcggg cgcgccgtgc atacccggcc cgccttcgcc gctcaaacgg atacgctgcc
     8101 cgtcatcgat accggcggga atattgactt ccaccgcctt gacggcctta ttccgccccg
     8161 cgccacggca tttgacgcaa ggttctttaa tgtgtttgcc ggcaccgtgg caggtcggac
     8221 aagtctgctg catacggaaa atcgcctgct ggatatgcac cgttcccgaa cctttgcaag
     8281 tcgggcaggt ttccggggat gtccccggtt tcgcaccgct gccgttgcag acatcgcacg
     8341 attcataagt cggaatgttg atgcgtttct tcacgccttt tgctgcttct tcaagcgtga
     8401 tttcgatacc gacttgaacg tcctcgccct gataatcagg ctgggcgcgc cccgaaccgc
     8461 ctccaaacat ttggctgaaa atatccccaa agtcaaaacc ttgagcaccg ccgaatcctc
     8521 caaaccctcc gaagcccccc tgtccgccgc cttcaaacgc cgcatggcca tactggtcgt
     8581 acatagcgcg cttttcttta tcggacaaag tttcatacgc cttttgtact tctttaaact
     8641 tctcttccgc ctctttattg tcaggattgc ggtcgggatg gtatttcatc gccaatttac
     8701 ggtaggcttt tttaatttct tcatcggtag ctgttcttgc cacacctagg gtggcataaa
     8761 aatcttgatt gctcatcttt tcatctgatt caaaataaaa tcgtcgataa aataagggca
     8821 acaggacaaa acacaaggtt tcccgaacaa aaaccgcctt tcagacggca tttcttctgt
     8881 tgttccttta acaatgcgcc gggtatcggc ggctttaccc gtccggaaat tgaaaa
//
LOCUS       DAWITQ010000074         8929 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.074, whole genome shotgun sequence.
ACCESSION   DAWITQ010000074 DAWITQ010000000
VERSION     DAWITQ010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8929)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8929)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8929
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.074"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            165..944
                     /gene="pgeF"
                     /locus_tag="WIX18_001286"
     CDS             165..944
                     /gene="pgeF"
                     /locus_tag="WIX18_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HEZ5238393.1"
                     /translation="MKTITETLNLAPKGKNFLTADWPAPANVKTLITTRNGGVSQGAY
                     QSLNLGTHVGDNPEAVRRNREIVQQQVGLPVAYLNQIHSTVVVNAAESLGGTPNADAS
                     VDDTGKAVCAVMTADCLPVLFCDRAGTAVAAAHAGWRGLAGGVLQNTIAAMKVPPVEM
                     MAYLGPAISADAFEVGQDVFDAFCTPMPEAAAAFEGIGGGKFLADLYALARLILKREG
                     VGGVYGGTHCTVLERDTFFSYRRDGATGRMASLIWLDGNAV"
     gene            996..1475
                     /locus_tag="WIX18_001287"
     CDS             996..1475
                     /locus_tag="WIX18_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238394.1"
                     /translation="MNKLFLTAAVLMLGACGFHLKGADGISPPLTYRSWHIEGGQALQ
                     FPLETALYQASGRVDDAAGAQMTLRIDSVSQNKETYTVTRAAVINEYLLILTVEAQVL
                     KRGEPVGKPMTVSVRRVLAYADNEILGKQEEEAALWAEMRQDAAEQIVRRLTFLKAE"
     gene            1477..2475
                     /locus_tag="WIX18_001288"
     CDS             1477..2475
                     /locus_tag="WIX18_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HEZ5238395.1"
                     /translation="MAAHIGRIDTDAPLKPLYVIHGEEELLRIEALDALRAAAKKQGY
                     LNREVYTADNAFDWNELLQTAGSAGLFADLKLLELHIPNGKPGKTGGEALQDFAARLP
                     EDTVTLVLLPKLEKTQLQSKWFAALAAKGEVWEAKPVGAAALPQWIRGRLDKIGLGIG
                     ADALALFAERVEGNLLAARQEINKLGLLYPKGHTVNIDEAQTAVANVARFDAFQLAGA
                     WMKGDVPRVCRLLDGLREEGEEPVLLLWAVAEDVRTLIRLAAALKQGQSIQSVRNSLR
                     LWGEKQTLAPLAVKRISVVRLLDALKTCAQIDRIIKGAEDGDAWTVFKRLVVSLAE"
     gene            2596..3015
                     /locus_tag="WIX18_001289"
     CDS             2596..3015
                     /locus_tag="WIX18_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238396.1"
                     /translation="MDNKTKLRLGGLILLTTAVLSLIIVLIVDSWPLAILLAAVIVAA
                     AAGGFVWTSRRQQRQFIERLKKFDIDPEKGRINEANLRRMYHSGGQHQKDAITLICLS
                     QKCSVDEAHAMFKKRPTRQEINQMAAKQSRGQKRPHR"
     gene            3090..3605
                     /locus_tag="WIX18_001290"
     CDS             3090..3605
                     /locus_tag="WIX18_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEZ5238397.1"
                     /translation="MMILKTAPLKRRFAAMLYEMLLVGAATCLAALFAGIAAIFLNPV
                     SIAVSALVTSILIMGSWWLYFRANWHGQGQTLAMRTWKIGLCDLNGIQPSLHLLRLRF
                     IWACIFIVFIPMLAYAGLRHFLGIPPKGAAGAALIWLILPWGFALLNPDRQFLYDFLA
                     GTRLVAVKGKP"
     gene            complement(3689..4573)
                     /locus_tag="WIX18_001291"
     CDS             complement(3689..4573)
                     /locus_tag="WIX18_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HEZ5238398.1"
                     /translation="MSSGNIHIHSMTGFANAAAECGSKRINLDLRAVNHRFLDIQIRM
                     PDDLRYLESGIREKISSHIARGKVECKIQIQDAENGNQSLELNRDLVGQLAEINKDLR
                     KHYDLAKLGVADILRFPGVLASQRENADALAKVIADLTDSALKDFTAARRREGKKLGE
                     HLLQRLESMEEIIDALSELFPTLLETHKEKIRARLAEAVGSIDNDRLQQEFALFIQKS
                     DIDEEFSRLRTHIAEVRRIVTEHKGSSGKRLDFLMQELNREANTLGSKSIATECTQAS
                     VELKVLIEQMREQVQNIE"
     gene            complement(5057..5920)
                     /gene="rpoH"
                     /locus_tag="WIX18_001292"
     CDS             complement(5057..5920)
                     /gene="rpoH"
                     /locus_tag="WIX18_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HEZ5238399.1"
                     /translation="MNNAFALPAIQSGNGSLEQYIHTVNSIPMLSQEEETRLAERRIK
                     GDLNAAKQLILSHLRVVVSIARGYDGYGLNQADLIQEGNIGLMKAVKRYKPGRGARLF
                     SFAVHWIKAEIHEFILRNWRLVRVATTKPQRKLFFNLRSMRKNLNALSPKEAQDIADD
                     LGVKLSEVLEMEQRMTGHDIAIMADNSDDEDSFAPIDWLADHDSEPSRQLSKQAHYAL
                     QTEGLQNALAQLDDRSRRIVESRWLQDDGGLTLHQLAAEYGVSAERIRQIEAKAMQKL
                     RGFLTEEAEAV"
     gene            complement(6184..7722)
                     /gene="lnt"
                     /locus_tag="WIX18_001293"
     CDS             complement(6184..7722)
                     /gene="lnt"
                     /locus_tag="WIX18_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HEZ5238400.1"
                     /translation="MVSKLDKYWQHPALYWPLLILFAAATPFTFAPYYHFWLMPLIFG
                     AFVRLIELRPRFAVSSAYLFGLTAYTTQFYWIHTALHDVSGLPDLYAVPLTFLLPAYL
                     ALYPALCFWLWKKFTLPRGIKIGLVLPILWTLTEFARERFLTGFGWGAIGYSQITPDS
                     PLAGFAPLGGIHMVTLATAFLGVWLVLASDNTARSGKRLLPIILIAALLAAGYTARQT
                     DFTRPDGSRSTVALLQGNIDQTLKWREDQVIPTIQKYYEQVGKTTADIVILPETAIPV
                     MRQNLPENILAKFAEQAQNNGSALAVGISQYTSDGNGYENAVINLTGYQENNQDGIPY
                     YAKNHLVPFGEYKPLPFLTTPLYKMMNMPLSDFRKGGGKQSALLMKNQKIAFNICYED
                     GFGDELIAAAKDATLLANASNMAWYGKSNAMYQHLQQSQARAMELGRYMVRATNTGAT
                     AIISPKGNIIAQAQPDTETVLEGHIKGYVGETPYMKTGSSWWLMGILTLAALILFIFR
                     NKEH"
     gene            complement(7791..8159)
                     /locus_tag="WIX18_001294"
     CDS             complement(7791..8159)
                     /locus_tag="WIX18_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 family protein"
                     /protein_id="HEZ5238401.1"
                     /translation="MAAIGIGMTVLVYGIVAVIVKLDDLGMLLMRRPQTFSRSLGQML
                     TAFMPCFMRGLSVVGTLAMFLIGGVLVAHNLGLLHDFLHAQHWDAGWAEYFANLVVGL
                     LSGSIACAPALPLMNRFGRH"
     gene            complement(8059..8517)
                     /locus_tag="WIX18_001295"
                     /pseudo
     CDS             complement(8059..8517)
                     /locus_tag="WIX18_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237797.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 family protein"
     gene            8711..>8929
                     /locus_tag="WIX18_001296"
     CDS             8711..>8929
                     /locus_tag="WIX18_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium:proton antiporter"
                     /protein_id="HEZ5238402.1"
                     /translation="MDWMGSLFLPGGALLFLSVVSTTLSACLGMPLLLVSPAGVLDGA
                     AEALAIAAFLMLVARPPAVFGGLWKFNYS"
BASE COUNT         1976 a         2229 c         2613 g         2111 t
ORIGIN      
        1 taagggcatc attcccgcac cggcaagaat ccgaacccga acgtttgaaa acaatcccga
       61 atctccgaat tcccgcctgt gcgggaatga cgaaaaaaca aacatccatt tgccccgaag
      121 gcagttaatc aaccctttcc gccacacacc tattccaata tccaatgaaa accatcacag
      181 aaaccctaaa tctcgccccg aaaggcaaaa acttcctgac cgccgattgg cccgcgcccg
      241 ccaatgtgaa aaccctgatt accacgcgca acggcggcgt gagccaaggt gcgtatcaga
      301 gtttgaacct cggtacgcac gtcggcgaca atcccgaagc cgtgcgccgc aaccgcgaaa
      361 tcgtgcaaca gcaggtcgga ttgcccgttg cctacctcaa tcaaatccac agcaccgtcg
      421 tcgtcaacgc tgcagaatcg ttaggcggta cacccaatgc ggacgcttcc gtggacgaca
      481 cgggtaaagc cgtctgtgct gtgatgaccg cagactgtct gcctgttttg ttttgcgaca
      541 gggcaggtac ggcggttgcc gccgcacacg cgggctggcg cggtttggcg ggcggcgtat
      601 tgcaaaacac cattgctgcg atgaaggttc cgcctgtcga aatgatggcg tatctcggcc
      661 ctgccatcag tgcggatgcg tttgaagtcg gacaggacgt gtttgatgcg ttctgcacgc
      721 ccatgcccga agccgccgcc gcatttgaag gcataggcgg cggcaaattc cttgccgacc
      781 tttacgcgct cgcccgcctg attctgaagc gtgaaggcgt gggcggcgta tatggcggca
      841 cgcattgtac ggttttggaa cgggacactt tcttttccta ccgccgcgac ggagcgacag
      901 ggcgtatggc gagcctgatt tggctggacg gcaatgccgt ctgaacacgc cgctgatata
      961 atctaccgac tttgtgcttt tgagaaaggc aagccatgaa caaactgttt cttactgccg
     1021 cagtgctgat gctgggcgcg tgcggtttcc acctgaaagg tgcagacggc atttctccgc
     1081 cgctgaccta ccggagctgg cacatcgaag gcggacaggc attgcagttt cctttggaaa
     1141 ccgcgctgta tcaggcttcg ggcagggtgg acgatgctgc cggcgcgcag atgaccctgc
     1201 gtatagacag cgtttcccaa aacaaggaaa cctacaccgt tacccgtgcg gcagtcatca
     1261 acgaatatct tttgatattg acggttgaag cgcaggtatt gaaacgcggc gagccggtcg
     1321 gcaaaccgat gaccgtgtcc gtccgccgcg tccttgctta tgccgacaac gagatcttgg
     1381 gcaaacagga agaggaagcg gcattgtggg cggaaatgcg gcaggatgcc gccgaacaga
     1441 ttgtccgccg cctgaccttt ctgaaggcgg aatgacgtgg cggcacatat cggacgcatt
     1501 gatacggacg cgcctttgaa acccctgtac gtcatccacg gcgaggaaga actgttgcgt
     1561 atcgaggcat tggacgcatt gagggcggcg gcgaagaaac aaggttacct taatcgggaa
     1621 gtttatacgg cagacaatgc tttcgattgg aacgagctgc tgcaaaccgc aggcagtgcg
     1681 ggtctgtttg ccgatttgaa gctgttggaa ctgcatatcc ctaacggcaa gcccggcaaa
     1741 accggcggcg aggcgttgca ggattttgcc gcccgcctgc cggaagatac ggtaacgctg
     1801 gttttactgc ccaaactgga gaaaacccag ctccagtcca aatggtttgc cgcattggcg
     1861 gcaaaggggg aagtgtggga agccaaaccg gtcggcgcgg cggctttgcc ccaatggata
     1921 cgcggacggc tggacaaaat cggtttgggt atcggggcag acgcattggc actgtttgct
     1981 gagcgcgtgg aaggcaatct gttggcggca cgtcaggaaa tcaacaagct cgggctgctg
     2041 tatccgaaag ggcataccgt caatatcgat gaggcgcaaa ccgccgttgc caacgtcgcc
     2101 cgcttcgacg cgttccaact ggcaggcgcg tggatgaagg gcgatgtccc gcgcgtatgc
     2161 aggctcttgg acggattgcg ggaagaaggc gaagaaccgg tactgcttct gtgggcggtt
     2221 gccgaagacg tgcggacgct gatccggctt gccgccgccc tgaagcaggg gcagagcatc
     2281 caatccgtcc gcaacagtct cagactttgg ggtgaaaagc agacgctcgc gccgcttgcg
     2341 gtcaagcgga tttccgtcgt ccgcctgctt gacgcgctca aaacctgcgc ccaaatcgac
     2401 cgaatcatca aaggtgcgga agacggcgac gcatggacgg tattcaaacg gcttgtcgtg
     2461 tcgctggcgg aataaagcgg taatccctaa aatccgaaaa tactgtaaaa taccgttaat
     2521 cctgaaaagt attcaccaat ccgtccgaaa acatttcaga cggcacgacc acctcaataa
     2581 aggaacatca accctatgga caataagacc aaactgcgct tgggcggcct gattttactg
     2641 accaccgccg ttttaagcct cattatcgta ttgattgtcg attcctggcc gcttgccatc
     2701 ctgcttgccg ccgtcatcgt cgccgccgct gcgggcggct ttgtttggac atcccgccga
     2761 cagcaacgcc agtttatcga acgcctgaaa aaattcgaca tcgatcccga aaaaggcaga
     2821 atcaacgagg caaacctgcg ccgtatgtac cacagcggcg gacaacacca gaaagatgcg
     2881 attaccctga tctgcctgtc gcaaaaatgt tcggtggacg aggcgcacgc tatgttcaaa
     2941 aaacgcccga cacgtcagga aatcaatcaa atggcggcaa aacagtcgcg cggtcagaaa
     3001 cgtccgcacc gttaaccaca tgagacatat ctgcatgaat gccgtctgaa gcctgttggc
     3061 gtttcagacg gcatattccg attgaaaaga tgatgatact gaaaaccgcc ccgctcaaac
     3121 gccgctttgc cgccatgctg tacgaaatgc tgctggtcgg tgcggcaacc tgtttggcag
     3181 cattgtttgc cggtattgcc gccatttttc tgaatcccgt ttctattgcg gtttctgcat
     3241 tggtaacgag tatcctgata atgggatcat ggtggcttta tttccgtgcc aactggcacg
     3301 ggcagggaca gaccttggcg atgaggacgt ggaaaatcgg tttgtgcgac cttaacggca
     3361 tacagccgtc tctacactta ctccgcctgc gctttatttg ggcgtgcata ttcatcgtct
     3421 tcattcctat gcttgcttat gccggattgc gccacttcct cggcattccg cccaagggcg
     3481 cggccggcgc ggcattgatt tggctgattt taccgtgggg gttcgccctg ctgaatcccg
     3541 atcggcagtt tctgtatgat tttcttgcag gaacaagatt ggtggcggtc aaaggaaagc
     3601 cttaagcctt tataccgcaa aggtttcaaa ctgaaaaaat gccgtctgaa agggctttca
     3661 gacggcattt gcttatcggg gaaaccgatt attcgatatt ctgcacctgt tcgcgcatct
     3721 gttcgatcag gactttcagc tcgaccgagg cttgggtgca ttcggtagcg atggatttgc
     3781 tgcccaaagt gttggcttcg cggtttaatt cctgcatcag gaagtccagc cgtttgccgc
     3841 tgctgccttt gtgttcggta acgatacggc gcacttcggc aatgtgggtg cgtaggcggc
     3901 tgaactcttc gtcgatgtcg gatttttgga taaagagggc aaattcctgt tgcaggcggt
     3961 cgttgtcgat gctgccgacc gcttcggcaa ggcgggcgcg gattttttct ttatgtgttt
     4021 ccaacagggt aggaaagagt tcgcttaatg catctatgat ttcttccatg ctttcgaggc
     4081 gttgtaacag gtgctcgccc aattttttcc cttcgcgccg gcgtgcggcg gtaaagtcct
     4141 tcagtgccga atcggtcaaa tcggcaataa cctttgccaa tgcgtccgca ttttcccttt
     4201 gacttgccaa tacgcccgga aagcgcaaaa tatcggcaac gcccagtttt gccaaatcat
     4261 aatgcttgcg gaggtctttg ttgatttcgg caagctgtcc gaccagatcg cgattcagtt
     4321 ccaaagactg attgccgttt tccgcatctt gaatttggat tttgcattcg actttgccgc
     4381 gtgcgatatg ggatgaaatt ttctcgcgga taccgctttc caaatagcgc aaatcgtcgg
     4441 gcatcctgat ttgaatatct agaaaacggt ggttgaccgc acgcaggtcg agattgatgc
     4501 gtttgctgcc gcactctgcc gctgcgttgg caaatccggt catgctgtgg atgtggatat
     4561 ttccgctgct catgtcgttc tccgaagccc gttaaaatgg aatcaatata tcacatctgt
     4621 atggcggcaa gcgttttcgg gtgtgaaaaa ttgaagattt tgcagcggca gattggaatc
     4681 acgcgctttt gttgctgcaa ggaagggaaa tgtatagtgg attaaccaag accagtacgg
     4741 cgttgcctcg ccttagctca aagagaacga ttctctaagg tgctgaagca ccaagtgaat
     4801 cggttccgta cgatttgtac tgtctgcggc ttcgccgcct tgtcctgatt tttgttaatc
     4861 cactatatca attccgccaa tctgtcggaa aagcagctga tgcggcagtg tctggtgcat
     4921 gtctgctttt tgatttcggc aattgcaacg gcgtggacgg ataaaatcgt gtacagcacg
     4981 acgcacaaac cgcattgatg tttaccaaat aaaatacccg acaaaacaat ttgtcgggta
     5041 ttttattgcg tatatttcaa accgcttcgg cttcttcggt caggaaacca cgcagtttct
     5101 gcatggcttt tgcttcaatc tggcggatgc gctcggcaga gacgccgtat tctgcagcaa
     5161 gctggtgcag cgtcagcccg ccgtcgtctt gaagccagcg gctttccaca atacggcggc
     5221 tcctgtcatc cagttgcgcc aaagcgtttt gtaaaccttc tgtttgcagg gcgtaatgcg
     5281 cctgtttcga tagttgccgg ctcggttcgg aatcgtggtc ggcaagccag tcgatggggg
     5341 cgaaactgtc ctcgtcgtcg ctgttgtctg ccatgatggc gatgtcgtgt cccgtcatgc
     5401 gctgttccat ttccagaact tcggaaagtt tgacacccaa atcgtcggcg atgtcttgtg
     5461 cctctttggg agacagggcg ttgaggtttt tacgcatact gcgtaaattg aaaaacagct
     5521 tgcgttgcgg tttggtggtg gcaacgcgaa ccaaacgcca gtttctcaaa ataaactcgt
     5581 ggatttcggc tttaatccag tgtacggcaa atgaaaacag acgcgcgcct ctaccgggct
     5641 tgtagcgttt gaccgccttc atcagtccga tattgccttc ctgaatcagg tctgcctgat
     5701 tcagcccgta gccgtcatag ccgcgcgcga tggaaacgac gacgcgcagg tgggacagga
     5761 tgagttgttt ggcggcgttg aggtcgccct ttatccggcg ttcggcgagg cgggtttctt
     5821 cttcctggga cagcatcggg atgctgttga cggtgtggat gtattgttcg aggctgccgt
     5881 tgccgctttg gatggcgggt aatgcgaaag cgttattcat ttggggcatt tcctttcggc
     5941 tgaaactgcg tatcggcggt ttgctgtgtt gggatgcagt atatcactgc ttggcttgta
     6001 ttttgtatgt ttggcaggag atatgcgcta aggtttgaaa gacaggaaaa ttttgtaagg
     6061 caggtttgat tgattttgta aacctgatga ctcaattcga tttcagaatt atattacata
     6121 cgtagttgta tgtaaacggc cggtttgaaa aaagacagcc cgtccggacg ggctgtgcag
     6181 gtatcagtgt tctttgtttc ggaagatgaa aagaatcagt gcggctaggg tcaatatgcc
     6241 catcaaccac catgaactgc cggttttcat atagggcgtt tcgccgacat agcctttgat
     6301 gtgtccttcc aatacggttt ccgtatcggg ttgggcttgg gcgatgatgt tgcctttggg
     6361 ggagatgatg gcggttgcgc cggtgttggt ggcacggacc atatagcgtc cgagttccat
     6421 agcccgtgcc tgcgattgtt ggaggtgctg gtacatggcg ttggattttc cgtaccacgc
     6481 catattgctg gcattggcaa gcagggtggc atctttggcg gcggcaatca gttcgtcgcc
     6541 gaatccgtct tcgtaacaga tgttgaaggc gattttttgg tttttcatca gcagggcgga
     6601 ttgcttaccg ccgcctttgc ggaagtcgga aaggggcata ttcatcattt tgtaaagcgg
     6661 cgtggtcagg aagggcagcg gtttgtattc gccgaagggg acgaggtggt ttttggcgta
     6721 gtaggggatg ccgtcctgat tgttttcctg ataaccggtc aggttgatga cggcgttttc
     6781 gtaaccgttg ccgtccgaag tgtattggct gatgccgacg gcgagcgcgc tgccgttgtt
     6841 ttgcgcctgt tcggcaaatt ttgccagtat gttttccggc aggttttggc gcataacggg
     6901 gatggcggtt tcgggcagga tgacgatgtc ggcagtggtt ttgccgacct gttcgtaata
     6961 tttctgtatg gtcgggatga cttggtcttc acgccatttg agggtttggt cgatgttgcc
     7021 ttgaagcagg gcgacggtgc tgcggctgcc gtcggggcgg gtgaagtcgg tttgtcgggc
     7081 ggtgtagcct gcggcaagca gggcggcaat caggataatc ggaagcaggc gtttgcccga
     7141 acgtgcggtg ttatcactcg ccaaaaccag ccagacaccg agaaaggcgg ttgccagtgt
     7201 aaccatgtgg atgccgccca atggggcaaa gccggcgagc gggctgtccg gggtgatttg
     7261 ggagtagccg attgcgcccc agccgaatcc ggtcaggaaa cgctcgcggg caaactcggt
     7321 cagcgtccac aggatgggca gtaccaaacc gatttttatg ccccgaggca gggtaaattt
     7381 tttccacagc cagaaacaca gtgccggata aagggcaagg taggcgggga gtaggaaggt
     7441 cagcggtacg gcatagaggt cgggcaggcc ggaaacgtcg tgcagggcgg tgtgtatcca
     7501 gtagaactgt gtcgtgtatg cggtcaggcc gaacaggtag gcggaagaga cagcaaaacg
     7561 cggacgcagt tcgatgaggc ggacgaaggc accgaaaatc aagggcatca gccaaaagtg
     7621 gtagtagggt gcgaaggtaa agggggtggc ggcggcaaaa aggatgagca aaggccagta
     7681 gagggcgggg tgctgccagt atttgtccag tttggaaacc atattcatct gtctgttcgg
     7741 aagataccgt ctgaacatct ttcaaacggc atcggtattt gaaaaagaaa tcaatgcctg
     7801 ccgaaacgat tcatcagcgg caaggcgggg gcgcaggcaa tcgaaccgga aagcagcccg
     7861 acaacgaggt tggcgaagta ctccgcccag ccagcgtccc agtgttgcgc gtgcaggaaa
     7921 tcgtgcagaa ggccgaggtt gtgggcgacc agtacgccgc cgataagaaa catggcaagc
     7981 gtgccgacca cgctcaaacc gcgcataaag caaggcataa aggcagtcag catttgcccc
     8041 aaactgcgcg aaaaggtttg tgggcggcgc atcagcagca tgcctaagtc gtcgagtttg
     8101 acgatgacgg caacgattcc gtacaccaaa acagtcatgc cgatgccgat tgccgccatt
     8161 acgagcatgc gcgtcatgtc ggtgcagaaa cttgtgcagc agcttttcta cgccttcaaa
     8221 gcacagataa atgccgcctg ccgtcaaaag cggcgtaatg agttgcggca ggaaggcgga
     8281 aagcagcagg gccgcaggca ccaaaaccgg cttgttggaa aaagaacctt tcgccatcga
     8341 ccaaacaatc ggcaactcgc gttctgccga tacgcccgta acccggttgg cattgggtgc
     8401 caaatcgtcg ccgaccatgc cggcggtttt ctttgcggcg gctttggtca tcagggcaac
     8461 atcgtccaaa acggcggtga tgtcgtccgg cagggtaaat agtgaggcaa atgccattaa
     8521 agaatcctga aatgcggcgc aaagtccgac attatatagg agaacgcgga tttgggcggt
     8581 ttcaggcggc atgaaacagg aaaatgccgt ctgaaggcgg tggcggacgt gaagtaaagt
     8641 ttcgtgaaaa aaatgccgtg ttacagtctt tcgattttaa tttaatgaat tttaagggag
     8701 aatcgttagc gtggattgga tgggcagtct gttcctgccg ggtggcgcac tgttgttcct
     8761 gagcgtggtt tcgaccactt tgtccgcatg tttgggaatg cctttgctgc tggtttctcc
     8821 cgccggcgtg ttggacgggg cggcggaagc cttggcgatt gcggcgttcc tgatgctggt
     8881 cgcgcgtccg ccggcagtgt tcggcggttt gtggaaattc aattacagc
//
LOCUS       DAWITQ010000075         8871 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.075, whole genome shotgun sequence.
ACCESSION   DAWITQ010000075 DAWITQ010000000
VERSION     DAWITQ010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8871)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8871)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8871
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.075"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(91..465)
                     /locus_tag="WIX18_001297"
     CDS             complement(91..465)
                     /locus_tag="WIX18_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238403.1"
                     /translation="MIIQNEFNLYPSNMLPERFCYPEKYVRISNDTSLIPYIQPHNFH
                     WWFENYGTEGAEVAYIFRNSILPDLNLIPFASNGEWEAYFDGNDVTGNSRVIVINLDN
                     IENHEFFNSFEDWLELAIKDTW"
     gene            complement(638..994)
                     /locus_tag="WIX18_001298"
     CDS             complement(638..994)
                     /locus_tag="WIX18_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mimic protein"
                     /protein_id="HEZ5238404.1"
                     /translation="MNEHNLLIFCLKDNVSISEYTEMIDWAYKNIQSETVVEITENQI
                     IEYQNRGLWRLVSEITDNWLFGPSEGDWLIDKESILAVKEKLQNSDFSTEPLVKNIIH
                     VLEYAIKNEKTVIFHF"
     gene            complement(1137..1481)
                     /locus_tag="WIX18_001299"
     CDS             complement(1137..1481)
                     /locus_tag="WIX18_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238405.1"
                     /translation="MNLENYENILIKLLFYHNNLVNEYSYFIENKNLFKIVSRTKTSK
                     GFFFTIEKPLNFLSKKTYFEFNFKYLHSGKERFGSFMCWINTNLMEFEGVFFNDLLPD
                     NMIINNFFEIND"
     gene            complement(1640..2041)
                     /locus_tag="WIX18_001300"
     CDS             complement(1640..2041)
                     /locus_tag="WIX18_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238406.1"
                     /translation="MKLKSLDFPTGYFYFDNAAINSDKVEVIAVGYRNTDKTIKIFIE
                     DVIHFRVVDESYFIDTFMDLISEDADRALLHENGGQSFFELLDECYAEWILKESYFPL
                     NREFFKYYIFMFEQTFIEIIGSSATYSIIEG"
     gene            complement(2045..2785)
                     /locus_tag="WIX18_001301"
                     /pseudo
     CDS             complement(2045..2785)
                     /locus_tag="WIX18_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713004.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(2855..3172)
                     /locus_tag="WIX18_001302"
     CDS             complement(2855..3172)
                     /locus_tag="WIX18_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238407.1"
                     /translation="MKKNIFHNVSLYEIIFSDNGNTLTLSFTDTIEGNYFGYIKCSNI
                     LNFKLDTNNFVDYEDKEDSLFPLFIPEIELYKYQFYSEIIIDVGIIIKISAETINFEP
                     LGK"
     gene            complement(3169..3771)
                     /locus_tag="WIX18_001303"
                     /pseudo
     CDS             complement(3169..3771)
                     /locus_tag="WIX18_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253822.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(4197..4541)
                     /locus_tag="WIX18_001304"
     CDS             complement(4197..4541)
                     /locus_tag="WIX18_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238408.1"
                     /translation="MIIEHNGNIHKIARMTGNKNNFLEIILSDIHENIKIKPLTIKVK
                     GENVINILPEEVSFYVKQGVDLIYEKYKRKFFISEISFCQSDSRPSSIYAFLTFHLLE
                     DIIKNESPSNYT"
     gene            complement(4579..4923)
                     /locus_tag="WIX18_001305"
     CDS             complement(4579..4923)
                     /locus_tag="WIX18_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238409.1"
                     /translation="MFLDDVNVFLDDLNVFLDDLNTNPITDEWYMSNFADKHIKILES
                     YEAFDILKQFVDYMIEEYDEKSEYEIMEILRQLKYQADTNEKFYTNTQKQKIVELYKQ
                     EISQDILNEIFR"
     gene            complement(4926..5114)
                     /locus_tag="WIX18_001306"
     CDS             complement(4926..5114)
                     /locus_tag="WIX18_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mafB"
                     /protein_id="HEZ5238410.1"
                     /translation="MEEVKANPQGKTPARIPPMSDTKNGWLAKDGWVKRVQNVNKIEI
                     HYIENSRTGEKTDFKFKD"
     gene            complement(5184..5528)
                     /locus_tag="WIX18_001307"
                     /pseudo
     CDS             complement(5184..5528)
                     /locus_tag="WIX18_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503511.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(5612..5914)
                     /locus_tag="WIX18_001308"
     CDS             complement(5612..5914)
                     /locus_tag="WIX18_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238411.1"
                     /translation="MLNEIFEIYSRQGESLIGIGIREAALPVPIAIDILNLFINERIL
                     VLGGDIYIKKDNYFYQTYDNWYYEGSNLFNSIDKAMHYLSQIKLENAYVSFVLKFI"
     gene            complement(5937..6206)
                     /locus_tag="WIX18_001309"
     CDS             complement(5937..6206)
                     /locus_tag="WIX18_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238412.1"
                     /translation="MMTESHGYLSNNLPVKIINDIIYATQLVEDLVLGKIKIVDFLKS
                     YNNFYCWLGFDELPQSEKIKFLSYLNILSIHKEIQDETVNRVYTD"
     gene            complement(6227..6433)
                     /locus_tag="WIX18_001310"
     CDS             complement(6227..6433)
                     /locus_tag="WIX18_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238413.1"
                     /translation="MMENSKKTWEIDGEIWLHCPVCGTEVMDYDICDVCQWQNTGETN
                     IDGGPNEMTLAEAKEAYAKGLPIR"
     gene            complement(6399..7148)
                     /gene="mafB"
                     /locus_tag="WIX18_001311"
                     /pseudo
     CDS             complement(6399..7148)
                     /gene="mafB"
                     /locus_tag="WIX18_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257312.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
     gene            complement(7254..7625)
                     /locus_tag="WIX18_001312"
     CDS             complement(7254..7625)
                     /locus_tag="WIX18_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HEZ5238414.1"
                     /translation="MIKQNSFVPYPEAMLPKGFKYPQSYLKLAQSTHAINYDEQYSFP
                     WWFENAESNISEVIDIYFEITGIPNLLPFARNQEWAACFDISDKSGNPKIIVVNLDNT
                     KYYETFENFDTWLKEAENDGW"
     gene            complement(7622..7873)
                     /locus_tag="WIX18_001313"
     CDS             complement(7622..7873)
                     /locus_tag="WIX18_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238415.1"
                     /translation="MDNTRIMAAREAGVKVEANVHNFNDRLSSKERIRFKHDGIEPQT
                     WGEAIQLRIRKQETQKGVPEGWSKRFPNGSIYDVKVLRK"
     gene            complement(8005..8211)
                     /locus_tag="WIX18_001314"
     CDS             complement(8005..8211)
                     /locus_tag="WIX18_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238416.1"
                     /translation="MNILSINNQNSTISLTQDEVFVLRAILNEIYAGVCVDSREFENV
                     SGVRKHEVDNLQQQFAGIYKKMTT"
     gene            complement(8221..>8871)
                     /gene="mafB"
                     /locus_tag="WIX18_001315"
     CDS             complement(8221..>8871)
                     /gene="mafB"
                     /locus_tag="WIX18_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
                     /protein_id="HEZ5238417.1"
                     /translation="QGIHNLGNLSPEAQLAAATALQDSAFAVKDSINSARQWADAHPN
                     ITATAQTALSVAEAATTVWGGKKVELNPTKWDWVKNTGYKKPAVRLMQTVDGEMAGGN
                     RPPKSITSNSKADASTQPSLQAQLIGEQISSGHAYNKHVIRQQEFTDLNINSPADFAR
                     HIENIVSHPTNMKELPRGRTAYWDDKTGTIVIRDKNSDDGGTAFRPTSGKKYYDDL"
BASE COUNT         2516 a         1720 c         1419 g         3216 t
ORIGIN      
        1 ataaaagttc ttgttccatt ttaaaacaat tagtaaaatc gagtttatcc tagttgtcca
       61 gggcagcctc atctctttat agatagctgc ttaccaagta tccttaattg ctaattcaag
      121 ccaatcttca aaactattaa aaaattcatg gttttctata ttatctaaat taatgacaat
      181 aaccctagaa tttcctgtta catcattacc atcaaaataa gcttcccatt ctccattact
      241 agcgaatggg ataagattta aatcaggcag gatagaattt ctaaatatat aagctacttc
      301 tgccccttct gttccataat tctcaaacca ccagtgaaaa ttatgtggct gaatataagg
      361 tattaaagat gtatcgttag agatacgaac atacttttca ggataacaaa acctttcagg
      421 aagcatatta ctaggatata aattaaattc attttgaata atcatttcgt taccttagga
      481 tcataaatac taccattagg aaactgggta gaccaatttg gtggtgctag ttcattttca
      541 atttgttttt taattctaaa ttgaatagct tctccccatg tttgcggcat ctaatgctgc
      601 ttgctctgca tcaatattac taaaaattgg attagtctca aaaatgaaaa attactgttt
      661 tttcattttt tatagcatat tcaagtacat gaataatatt tttcactaag ggctctgtag
      721 aaaaatctga attttgtaat ttttctttta cagccaaaat actttcctta tctattagcc
      781 aatccccctc acttggtcca aataaccaat tatcggtaat ttcagaaaca agtctccata
      841 atccacgatt ttgatattca ataatttgat tttccgtaat ttctacaact gtttcagatt
      901 gaatgttttt ataagcccaa tcaatcattt cagtatattc actaattgaa acattgtctt
      961 ttaaacagaa aattaacagg ttgtgttcat tcatttgtct aagttcctga tatgagtttg
     1021 ttgttgtaaa taatcttttg cttgcttacc ttgtaaatta aaggattaac cgcaccttgg
     1081 atgatgccgc gaatatcatc catacggtta ccccaccaat ttttattggt gtatcgttaa
     1141 tcatttattt caaaaaagtt atttattatc atattatcag ggagcaggtc gttaaaaaaa
     1201 accccctcaa attccattaa attagtattt atccagcaca taaacgaacc aaagcgttct
     1261 ttccctgagt gtaaatattt aaaattaaac tcaaaataag tttttttgct tagaaaattt
     1321 aatggttttt ctatagtgaa aaaaaagccc ttactcgttt tcgttcgaga tactatttta
     1381 aataaatttt tattttcaat aaaataagaa tattcattta ctaagttgtt atgataaaaa
     1441 agtaatttta ttaaaatgtt ttcataattt tctaggttca tttctagctc aatttaaaat
     1501 gatttcattg ttgccgtacc aatgcgaaat ttaccatcaa caaaatttcc cttcactgat
     1561 acaggtacac catcaacttg ggtagtttta ttttcaggct gcctgaaaga aagataggca
     1621 acttattact catcttacgc tagccctcaa taattgaata cgttgcacta gaaccaatta
     1681 tttctatgaa tgtttgctca aacataaaaa tatagtattt aaagaattct ctattcaaag
     1741 gaaaataact ttctttcagt atccattccg cataacactc atcaagaagt tcaaaaaaag
     1801 attgaccacc attttcatga agcaaagctc tatctgcatc ttccgaaatt aaatccataa
     1861 aagtatctat aaaatacgat tcatcaacaa ccctaaaatg aataacatct tcaataaaaa
     1921 tttttatggt tttatccgta tttctataac caactgctat aacttctact ttatcagagt
     1981 ttattgctgc attatcaaaa tagaaatagc cagttgggaa atctaagctt tttaatttca
     2041 taatttatcg tgtatttcca tatctgattt ttatttttcg gttattacta attgttattt
     2101 caagtgttgg ttctccacca ctactatcat tacgagcatt aaccgcacgc ccatcaggta
     2161 aattgcccgt tatcgttcca ttaggacgtg tttgtacatt tcgaacattc agactattaa
     2221 aatcatttag tgcgtcattg taatccccca ctttatcata ctgaacagcg ggaccttttg
     2281 ttttactcct ttgagtagta ttgctcaaaa tgtctttgat ttgtaaatca ctgcgcgcct
     2341 taccggcttc tatgcgagct gccacactac tcgggctata ggggtcgcta tcaatcgcag
     2401 gattaccacc gctggttttt tgtccgctag cctgtttccc aacctgctgt actgtatcgc
     2461 caatttcatc taccgtacct aacgccttag tctgcatatg gcgaacagca ggttttttat
     2521 agccggtatt tttaacccaa tcccatttgg tcgggttaag ttctactttt ttacctctcc
     2581 aaaccgtacc tgcggcctct gctacggcaa gggcagtttg ggctgttgct gttatattcg
     2641 gatgggcatc agcccattgt ctggcggaat tgatgccgtc ttttaccgca aaagcactgt
     2701 cctgtaatat gctcgcggca gcaagttgtg cttccgggct taattttcct gaattattaa
     2761 taccttgtag agtctgctgc gcagagatgt agcaactgta tttttacccc gtcgggtaaa
     2821 aatacagttg ctacggctgc tgggaaagca gttactattt tcccagtggc tcaaaattaa
     2881 ttgtttcagc agatattttt ataataatcc ctacatcaat aataatttca ctataaaatt
     2941 ggtatttata tagctctatt tcgggtataa acaagggaaa caagctatct tccttatcct
     3001 cataatctac gaaattattt gtatctaatt taaaattcaa aatattactg catttgatat
     3061 atccgaaata attaccttca attgtatctg taaaagataa tgtaagggta tttccattat
     3121 cggaaaagat tatttcataa aggcttacat tgtgaaaaat attttttttc atttgacaaa
     3181 atatccagaa tgatgatgat tatttggcaa tggattgcct tcataatctt gtcgttgcgg
     3241 atattttccc tgtacaccat cggttcgcgg cactctttgg gttcttataa cctctccatt
     3301 tggacgaata tctattttca cgccatcagg acctttccat gtttcatatt gagccgcatc
     3361 tgaaccagta cgtctaaaac cttgttcttg caatgcttga cgtaattcat ctcgcgtagt
     3421 tggtctgata gatttaacaa ctggcttgtt tcctcctgcc atctcaccgt ccaacgtctg
     3481 catagggcgg gcagcaggtg ttttatagcc gttattttta acccaatcct atttggtcgg
     3541 gttaagttct acttttttac ctctccaaac cgtacctgcg gcctctgcta cggcaagggc
     3601 agtttgggct gttgcagtta tattcggatg ggcatcagcc cattgtctgg cggaattgat
     3661 accgtctttt accgcaaaag tactgtccta taatgcgctt gcggcagcaa gttgtgcttt
     3721 cggacttaaa tttcctaaat cattaatacc ttgtaaagtt tgctgcgcag agatgtaggt
     3781 cggatatttg tatccgacaa aaatatttga cgcatctatc gtttccgaaa tgccgctgtt
     3841 ggaaaatgtc ggattcgaga atccgaccta cggctatttc gtttaagtca taaatagcca
     3901 ttcatgttcc ttctgaattt gcttttgcta tccttagaac caatcatata aacattatca
     3961 tcattaatta atgttctaag tttatgaagc ggtcaaatct gtcaaactac cagagatgaa
     4021 gcatatcctc ctggaagtaa ttctgttcgt gctgtttcca tatcttcttt gccatcatca
     4081 gttacttctc tgtctaaata aaatcttacg ataagttttt gtctaatttc atcaaattct
     4141 gccgtaatta atcttatatt gatatgaata cacggttcat acctgctatt agccagtcag
     4201 gtgtagttgg atggggattc atttttaata atatcttcaa gcaagtgaaa tgtaagaaaa
     4261 gcgtagatac ttgaaggccg gctatctgat tggcaaaaag aaatttcgga gataaagaat
     4321 ttccgtttat atttttcata aattaaatca acaccttgtt ttacataaaa actaacttcc
     4381 tcaggaagga tatttataac attctctcct tttactttta tagttaatgg tttgattttt
     4441 atgttttcat gaatatctga taggattatt tctaaaaaat tatttttatt tccagtcatt
     4501 ctggctattt tatgtatatt tccattgtgt tcgattatca ttttattttt tccaaggatt
     4561 tccttctata ttgatagttt atctaaagat ttcatttaaa atatcctgac taatttcttg
     4621 tttatataat tctacaattt tctgtttctg tgtatttgta taaaattttt cgttggtatc
     4681 tgcttgatat tttaattgtc tcaatatttc catgatttca tattctgatt tttcatcata
     4741 ttcttcaatc atgtaatcaa caaattgttt tagaatatca aaggcttcgt aactttccaa
     4801 aattttaata tgtttatcgg caaaattgga catataccat tcgtcagtga ttggattagt
     4861 atttaaatca tctaaaaaaa catttaaatc atctaaaaaa acatttacat catctaaaaa
     4921 catgactaat ccttaaactt aaaatctgtt ttctcaccgg ttcttgagtt ttcaatgtaa
     4981 tgtatttcaa ttttgtttac gttttgaaca cgcttaaccc aaccgtcttt tgctaaccaa
     5041 ccatttttag tatcggacat aggaggtatt ctcgcaggag ttttgccctg tgggtttgcc
     5101 ttaacttctt ccattgctaa ttgttccttt aaattattag gtattgtacg accggttgat
     5161 ttttcaacag attgtgtccc tatttttaat gatttgtttc ccccagccat ttccccgtct
     5221 acagtctgca tagggcgggc agcaggtttt ttatagccgg tatttttaac ccaatcccat
     5281 ttagtcgggt taagttctac ttttttaccg cgccaaaccg tacctgcggc ctctgctacg
     5341 gaaagggcag tttgggctgt tgcagttata ttcggatggg catcagccca ttgtctggcg
     5401 gaattaatgc cgttttttac cgcaaaagca ctgtcctgta ataggctcgc ggcagcaagt
     5461 tgtgcttccg gacttaaatt tcctaaatca ttaatacctt gtagagtctg ctgagcggct
     5521 gtatctgagc cggtcagtgt aggttggatt aaaacccagc attttcaaca tcttgatgtt
     5581 ttactataaa tctattcttg tgcttccttt gttagataaa tttcaacaca aaagatacgt
     5641 atgcattctc taattttatt tgagataaat aatgcattgc tttgtcgata ctgttaaata
     5701 aattacttcc ctcgtaatac caattatcat atgtttgata aaaataatta tctttcttga
     5761 tataaatatc tccccccaat acaagtattc tctcattgat aaataaattt aatatatcta
     5821 ttgcaatagg gacgggtaat gcggcttctc taattccaat tcctatcaaa gattcccctt
     5881 gtctcgaata aatttcaaaa atttcattta acatgttaat ctctatctac tatttttcaa
     5941 tcggtataaa ccctattcac agtttcatct tgtatttctt tatgaatact taatatatta
     6001 agatagctta ggaattttat tttctcagat tgaggcaact catcaaaacc aagccaacaa
     6061 taaaaattgt tatatgattt taaaaaatca acaattttta tttttcctaa aaccaaatct
     6121 tcgactaact gggttgcata aataatatca tttatgattt taacaggtaa attatttgat
     6181 aggtaaccat gggattccgt catcattgat ttctctaggt gcttatttat ctgattggta
     6241 agccttttgc gtaagcttct ttcgcctccg caagtgtcat ttcattaggg ccaccatcta
     6301 tattagtttc tcctgtattt tgccactgac aaacgtcaca gatatcatag tccataactt
     6361 cagttccgca aacaggacaa tgtagccata tttctccgtc aatttcccat gtcttttttg
     6421 aattctccat cataatactt ctttcctaag tttggtttaa acattgtttt gattttgaat
     6481 gtttttggat tggccaaaac atagatattg ttattgatat catagcgcac tcgtctatgt
     6541 tccgtctgat aacctaatat cttgtccgat gtctgttttg ataacaaatc agacgccatt
     6601 ttttggtagt cttcaatggt tatatcgcca aattcttttc catgagcttt gaaatgtcca
     6661 tttaaagatt tctcagtagg aaacttggac tttgtccatc tgatgcggtc ttgaattgtt
     6721 cctgtcggag aaatagatgt atcaggttta acatatgagg caggtaagcc gatattgtta
     6781 tcagagtgtg tagggtgttg ctgcgtactt ggttttggtg gcttattccc acctgccatc
     6841 tccccatcta aagtctgcat agggcgggca gcaggtgttt tatagccggt atttttaacc
     6901 caatcccatt tggtcgggtt aaggtttact tttttaccgc cccaaaccgt agttgcggct
     6961 tctgctacgg aaagggcagt ttgggctgtt gcagttatat tcggatgggc atcagcccat
     7021 tgtctggcgg aattaatgcc gtcttttacc gcaaaagcac tgtcctgtaa taggctcgcg
     7081 gcagcaagtt gtgcttccgg acttaaattt cctaattcat taatatcttg taaagtttgc
     7141 tgcgcagaga tgtaggtcgg atatttgtat ccgacaaaaa tatttgacgc gtctatcgtt
     7201 tccgaaatgc cgctgttgaa aaacgtcgga ttcgagaatc cgacctacgg ctgctaccaa
     7261 ccatcatttt cagcttcttt tagccaagta tcaaaatttt caaaagtctc gtaatatttt
     7321 gtattatcta aattaactac tataatttta ggattacctg atttatctga aatatcaaaa
     7381 caggcagccc actcttggtt tctagcaaaa ggtaataggt ttggaatgcc agttatttca
     7441 aaataaatgt caattacttc tgatatattg ctttctgcat tttcaaacca ccaaggaaaa
     7501 gaatattgtt catcgtagtt aatggcatga gtggattgag ctaattttaa ataactttgc
     7561 ggatatttaa atcctttagg aagcattgct tcaggatacg gaacaaaact attttgtttt
     7621 atcatttcct aagtaccttt acatcataaa tacttccgtt aggaaatctt ttgctccacc
     7681 cttctggaac tcctttttgt gtttcttgct ttctaattcg tagctggata gcttctcccc
     7741 aagtttgagg ctcaatacca tcatgcttaa acctgattct ctcttttgat gataatcggt
     7801 cattaaaatt atgaacattc gcttccactt ttacccctgc ttcacgtgct gccataatac
     7861 gcgtgttatc catactagta ggtgctccat caggcatatt aacaacatca accctgtcgc
     7921 caacccatga tttttttctt tcatttcggc tacaatagaa tcatagttgt aatttgcact
     7981 aggctctgac aaaaatttgg gttgttaagt tgtcattttt ttataaattc cagcaaactg
     8041 ttgttgtaaa ttatctactt catgttttct aacaccagat acattttcaa attctcttga
     8101 atctacacat acgcccgcat atatctcatt caagatagct cgtaaaacaa aaacttcatc
     8161 ttgagttagt gaaatagttg agttttgatt atttatggat agtatattca tggctttttc
     8221 ctataaatca tcataatatt ttttacctga tgttggtcta aatgctgtac ctccatcgtc
     8281 agaattttta tctcggataa ctattgtccc tgttttatca tcccaatacg cagttctacc
     8341 gcgaggtaac tctttcatat ttgttggatg gctaacaata ttttcaatat gccgagcaaa
     8401 atctgctggt gaattgatat ttaaatccgt aaattcttgt tgtcttatga catgcttgtt
     8461 ataagcatgc ccactactaa tttgttctcc aattagttgc gcttgtaaag acggttgtgt
     8521 ggaagcatct gctttgctgt tggacgttat agatttaggc ggtctattcc ccccagccat
     8581 ctccccatct acagtctgca taaggcgaac agcaggtttt ttatagccgg tatttttaac
     8641 ccaatcccat ttggtcgggt taagttctac ttttttaccg ccccaaaccg tagttgcggc
     8701 ctctgctacg gaaagggcag tttgggcagt agctgtaatg ttcggatggg catcagccca
     8761 ttgtctggca gagttgatac tgtcttttac cgcaaaagca ctgtcttgta atgcggttgc
     8821 ggccgcaagt tgtgcttccg gacttaaatt tcctaaattg tgaataccct g
//
LOCUS       DAWITQ010000076         8791 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.076, whole genome shotgun sequence.
ACCESSION   DAWITQ010000076 DAWITQ010000000
VERSION     DAWITQ010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8791)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8791)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8791
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.076"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(174..866)
                     /locus_tag="WIX18_001316"
     CDS             complement(174..866)
                     /locus_tag="WIX18_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEZ5238418.1"
                     /translation="MKRFTYTLSDGLCIEIELKRSAKKNLILRPVNMQTVSINVPPFF
                     QDHALANWLAANETILRNTLAKTPVHPVSHPNLPEWIWYRGIKTKLDTHSQSHIRITS
                     SEILLPRKETAAQIDHLRRLLNERAREYLLPRLEKHAAETGLTPTATDLSNAKTFWGV
                     CRPHTGIRLNWRLIGTPEYVADYVCIHELCHLRHPDHSPRFWHLVNTLTPHTDNAKSW
                     LKAHGRELFVLG"
     gene            complement(974..2166)
                     /locus_tag="WIX18_001317"
                     /pseudo
     CDS             complement(974..2166)
                     /locus_tag="WIX18_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215592.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
     gene            complement(2295..3032)
                     /gene="pxpA"
                     /locus_tag="WIX18_001318"
     CDS             complement(2295..3032)
                     /gene="pxpA"
                     /locus_tag="WIX18_001318"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HEZ5238419.1"
                     /translation="MKQVDLNADLAEGCGSDEALLQLITSANIACAQHAGSIADIRAA
                     LAYAQQNGVRIGAHPGYPDRENFGRTEMNLSEADLRACLNYQLGALQALCRDQGLEMA
                     YVKPHGAMYNQAAKNRALADTVARIVADFDPKLKLMALSGSLLLEAGKAAGLGVISEV
                     FADRRYMPDGTLVPRSRPDAQVDSDEEAIAQVLQMVRDGQVKAVDGSLVAVQADSICL
                     HGDGPHAVVFAEKIRQELLAAGIKVSA"
     gene            complement(3019..3948)
                     /locus_tag="WIX18_001319"
     CDS             complement(3019..3948)
                     /locus_tag="WIX18_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HEZ5238420.1"
                     /translation="MIHVSAVQAPAHIQDTGRYGHRRYGIGHAGAMDTVALAAGNILL
                     GNDEGTAAIEIALGGIMLVFERDTPFCLTGAVYQAELDGEPVYSYWRYTARKGQTLKM
                     VRAVQGMYGYVCVAGGFDVPEVMGSRSTDLKAGFGGHQGRMLQKGDYLPIGKGAQELS
                     KVGIAPIPFTDTVHLVPSSEYAAFSEKGRLNLERETWTLQSDSNRMGYRFDGQPLTLS
                     QPLEMLSHAVQAGTVQVPPGGKPIILLADAQTTGGYPKIATVAAADLGRLAQVRFGSK
                     VKFKIIGLKEATALRRKNQAYLNQIRRITHEAG"
     gene            complement(3945..4592)
                     /gene="pxpB"
                     /locus_tag="WIX18_001320"
     CDS             complement(3945..4592)
                     /gene="pxpB"
                     /locus_tag="WIX18_001320"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HEZ5238421.1"
                     /translation="MRIEITPISESALVCRLNAPSELGKQQKLWAFAAALGQHDRIEE
                     VVVGMNNLTVFTRFDTDLATLADELQYVWEHTAVTDHQGKLVEIPVCYGGEYGPDLAE
                     VAAFHQTVISEIVRRHTAQTYTVFMMGFQPGFPYLGGLPEALHTPRRAVPRTSVPAGS
                     VGIGGSQTGVYPFASPGGWQIIGRTELPLFRADLNPPTLLAAGDQVRFVAERIEP"
     gene            4776..6983
                     /gene="uvrD"
                     /locus_tag="WIX18_001321"
     CDS             4776..6983
                     /gene="uvrD"
                     /locus_tag="WIX18_001321"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HEZ5238422.1"
                     /translation="MFPDQSAPNLLQGLNPEQLSAVTWPPQSALVLAGAGSGKTRVLT
                     TRIAWLLQTGQASVHSIMAVTFTNKAAKEMQTRLGAMIPVDVRAMWLGTFHGLCHRFL
                     RLHHRDAGLPSSFQILDGGDQLSLIKRLLKSLNIAEEIIAPRSLQGFINAQKESGLRA
                     SVLSAPDPHTSRMIECYAEYDKICQREGVVDFAELMLRSYEMLQSNEILRQHYQNRFN
                     HILVDEFQDTNKLQYAWLKLMAGGNAAVFAVGDDDQSIYRFRGANVGNMTALMEEFHI
                     NAPVKLEQNYRSVGNILAAANAVIENNDERLGKNLRTDAEAGDKIRYYSAFTDLEEAR
                     FIVDETKALEREGWDLDEIAVLYRSNAQSRVIEQSLFRSGIPYKIYGGLRFYERQEIK
                     HALAYLRLAVNPDDDNALLRVINFPPRGIGARTIENLQTASNEQGITLWQAACNAGAK
                     ATKVAAFVRLIEALRNQVGQMPLPEIIVGILKDSGLTEHYKTQKGDNQDRLDNLDELV
                     NAAIEFKPEDSNFEILPENISDDPAFPILAFLSNATLESGENQAGVGEKAVQLMTVHA
                     AKGLEFNAVFLTGMEEGRFPSEMSLAERGGLEEERRLMYVAITRARKRLYITMAQQRM
                     LHGQTQFGIVSRFVEEIPPEVLHYLSVKKTAYDSYGSPRQTAASKDKIIDDYKQPQTY
                     AGFRIGQNVRHAKFGTGVIIDAADKGESARLTINFGKQGVKELDTKFAKLEAM"
     gene            7340..7879
                     /locus_tag="WIX18_001322"
     CDS             7340..7879
                     /locus_tag="WIX18_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HEZ5238423.1"
                     /translation="MSQVFKDFDLSSVWESDSWADENYKEAPFTPEILAAVESELGYK
                     LPQSFIELMAVQNGGIFVKNCFPTTQRNSWAKDHVQICEVSGIGFEKEGSLCGETGQK
                     LWMEEWEYPPIGVYFANDPSGGHAMFALDYRECGKDGEPKVVFVEQESDFEIVELAPD
                     FETFIRSLRHEDEFIDEEI"
     gene            complement(8069..8284)
                     /locus_tag="WIX18_001323"
     CDS             complement(8069..8284)
                     /locus_tag="WIX18_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238424.1"
                     /translation="MNIINYTGDDIIISLTREELQLLRSLVIEIYAGVCIDAEEFEIV
                     SGIRNSKLVQELEQQLIEAYDLMDTKG"
     gene            complement(8292..8495)
                     /locus_tag="WIX18_001324"
     CDS             complement(8292..8495)
                     /locus_tag="WIX18_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238425.1"
                     /translation="MLKRNLGFDTFKLITIFFLGIRRLQSKHIRAIWDDKSGAIVIRD
                     PNSKDGGTAFRPTLGKTYFDKQK"
     gene            complement(8408..8767)
                     /locus_tag="WIX18_001325"
     CDS             complement(8408..8767)
                     /locus_tag="WIX18_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HEZ5238426.1"
                     /translation="MIKLDLKSINLYDIDFEKFTPEIPDNFHRWIDLDIGIEGEQGSS
                     IFSLCICSPKWISHHCNKEGFFWSNALILEQFDHKIIKSEIDKILEYCSKETWDLTLS
                     NLLRFFSWEFEDYNPNT"
BASE COUNT         2188 a         2432 c         2186 g         1985 t
ORIGIN      
        1 ctctttcagt tacagcagct tgatcccttt cccttatcca acgggggaag gctaggatag
       61 ggtggcttgc aaatatacag aacaagggac aagagccacc ctctctccaa ccctctccct
      121 ccgtacggga gggggtggat tctcgcgggc gaagcccacg ctacggttag cctttacccc
      181 agcacaaaca attcccgccc gtgcgccttc agccaacttt tagcattgtc ggtatgcggc
      241 gtcagcgtgt tcaccaaatg ccaaaagcgc ggactgtggt cggggtggcg gaggtggcag
      301 agttcgtgga tgcagacata gtcggcgacg tattcgggcg tgccgatcag ccgccagttg
      361 aggcggatgc cggtgtgcgg gcggcatacg ccccaaaagg ttttggcgtt gctcaggtct
      421 gtggcggtgg gcgtcagtcc tgtttcggct gcgtgttttt caaggcgggg cagcaggtat
      481 tcgcgggcgc gttcgttcaa caggcggcgc aggtggtcga tttgtgcggc ggtttctttt
      541 cggggaagca ggatttcaga cgacgtgata cggatatggc tttggctgtg ggtatccagc
      601 ttggtcttta ttccccgata ccaaatccac tcgggtaagt ttgggtggga aacaggatgc
      661 acgggcgttt tggcaagcgt gttccgcaaa atcgtttcgt ttgccgccag ccagtttgct
      721 aacgcgtggt cttgaaaaaa gggtgggacg ttgatgctga ccgtctgcat attgacgggg
      781 cgcagaatca gatttttctt ggcactgcgt ttgagttcga tttcgatgca caaaccgtcg
      841 gaaagagtat aggtgaagcg tttcatagtt gtgaatgggt ttcagaccgg atacatcgtc
      901 tgaaacagga attttccata tcaggcggca aacttcggat aatatacaaa atcaaacatc
      961 tgcgctacaa ggttcagccg aacaagccgc cgatatattt gctgatggtg atggcgctga
     1021 gtactgccat caaaccgacc acaatcacgc cggaaacggt gagccacagc gggtgtttgt
     1081 agtcgccgac aattttggtt ttgtaggcgg caatcagaat cagaccgagg gaaatcggta
     1141 aaatcaggcc gtttaatgcg cctacgaaca ccagcacctg cgccggtttg ccgatggtgg
     1201 aaaatacggc ggtggacacg gcgataaagg caataatcca tttgttttta ttgcgttcga
     1261 tagacgggct gagaccggag aagaacgaca ccgaagtata agccgcacca atcaccaagt
     1321 aatcgaagcc gcccaaatca ccacgccgaa aatcagcagg ccgatgtatc ccgccgcata
     1381 ttcaaacggt gtggaagcag ggttgtcggg attgagctgt acgccttggc tgaccacgcc
     1441 caaaaccgcc aaaaacaata caatccgcat aatcgaggca atcaggatcg cccgcaccga
     1501 gctttggctc acttccggca acgccgattt gcctttgatg cctgcgtcca gcagacggtg
     1561 cgcaccggcg aaggtgatgt agccgccgac cgtgccgccc accagtgtaa caatcgccat
     1621 tgcatcgagt ttttccggca taaaggtatg cacggcggca tctgccagcg gcggattcgc
     1681 ctgccatgcc acataaaccg tcagcgcaat cattacgaaa cccatcactt gggcgaattt
     1741 gtccatcact ttgcctgctt ctttaaacag aaacacaccg atggcaatca cgccgctgat
     1801 cacggcaccg gtttccggcg acagtccggt cagcaggttc agacccaagc ctgcgccgcc
     1861 gacgttgcca atattgaacg ccaaaccgcc catcacaatc agcacagcca agaaatagcc
     1921 tgcgccgggc aagacctgat tggcaatatc ctgcgcctgt ttttcggaaa cggcgacaat
     1981 ccgccaaata ttgagctgcg ccccgatgtc gagcagaatc gagagcagaa tcacaaagcc
     2041 gaaacttgcc gccagtgctt gggtgaaggt ggcggtttgg gtcagaaagc ccgggccgat
     2101 ggcggaagtc gccatcagga atgcagcgcc gattaaggca tttctgcggt ttttttgatt
     2161 agacataatc gcttatcctc tataaaattg gttgttgctg tgtttgggcg aaacctgcgg
     2221 ttttagctac gcagaaactc gctttgctcg ttttggcgaa acctgcggtt ttcagacggc
     2281 ctatgaactg tttttcaagc agaaactttg atgcctgccg ccagtagttc ctgccggatt
     2341 ttttcggcaa acaccacggc gtgcggcccg tctccgtgca gacagatgct gtcggcttgc
     2401 acggcaacca ggctgccgtc cactgctttg acctgcccgt cccgcaccat ctgcaatact
     2461 tgggcgatgg cttcttcgtc gctgtccacc tgcgcatcgg ggcggctgcg gggaaccagc
     2521 gtaccgtcgg gcatatagcg gcggtcggcg aatacttcgg aaatcacacc caagcctgcg
     2581 gcttttccgg cttccaagag caggctgccg gaaagtgcca tcaatttcaa tttcgggtcg
     2641 aaatccgcca caattcgggc aacggtatcc gccagcgcac ggtttttcgc cgcttggttg
     2701 tacattgcgc cgtgcggttt gacataagcc atttccaaac cctgatcacg gcacaaggcc
     2761 tgcaatgcgc ccaactggta attcagacac gcccgcaaat cggcttcgga cagattcatt
     2821 tcggtacggc cgaagttttc ccgatcggga tagccggggt gtgctccgat gcgcacgccg
     2881 ttttgttggg catacgccaa tgccgcccga atatcggcaa tgctgccggc gtgttgggcg
     2941 caggcgatgt tggccgaagt aatcagctgc aacaaggctt cgtcgctgcc gcagccttcg
     3001 gcgagatcgg cgtttaaatc aacctgcttc atgggtgatt ctccgtattt ggttcagata
     3061 ggcttggttt ttgcgccgca gggcggtggc ttctttcaag ccgattattt tgaatttgac
     3121 tttgctgccg aagcgcacct gtgccagcct gcccaaatcg gcggcggcaa cggtagcgat
     3181 tttcggataa ccgccggtgg tttgcgcatc ggccagcagg ataatcggtt tgccgccggg
     3241 cggcacctgc acggttcctg cctgaacagc gtgggacagc atttccaaag gttgcgacag
     3301 ggtcagcggc tgtccgtcga agcggtagcc catgcggttg ctatcgcttt gcagcgtcca
     3361 cgtttcccgt tccagattca gacgcccttt ttcactgaaa gcggcatatt ccgacgaagg
     3421 aacaaggtgg acggtatcgg taaacggtat cggggcaatg ccgactttgg acaattcctg
     3481 cgcacctttg ccgatgggga gataatcgcc tttttgcagc attctgccct gatggccgcc
     3541 gaaaccggct ttcaggtcgg tacttctcga acccatcact tccggcacat caaatccgcc
     3601 cgccacgcac acatagccgt acatgccctg cacggcacgc accattttca aggtctgccc
     3661 tttgcgggcg gtataacgcc aatacgaata gaccggttcg ccgtccaatt ccgcctgata
     3721 cacggcaccg gtgagacaaa acggcgtatc ccgttcaaac accagcatta tcccgcccaa
     3781 agcgatttcg attgcggccg tgccttcgtc gttgcccaat aaaatattgc ccgccgccaa
     3841 agcaaccgtg tccatcgcac cggcatgacc gatgccgtaa cgccggtgtc cgtagcgtcc
     3901 ggtatcctga atatgcgccg gtgcctgcac tgccgaaaca tgaatcatgg ctcaatcctt
     3961 tctgcaacaa agcggacttg gtcacccgcc gccagcaggg tcggcggatt caaatcggct
     4021 cggaacaagg gtaattcggt tctgccgata atctgccagc cgccgggcga agcgaacgga
     4081 tacacaccgg tctgactgcc gccgataccg accgaaccgg caggaacgga cgttctcggc
     4141 acggcacggc ggggcgtgtg caatgcttcg ggcaagccgc ccagataagg gaaaccgggc
     4201 tggaagccca tcataaatac ggtataagtt tgcgccgtat ggcggcggac gatttcggaa
     4261 ataaccgtct gatggaaagc agcgacttcc gccaaatccg ggccgtattc gccgccgtag
     4321 cagacgggaa tttccaccag tttgccctga tggtctgtaa cggcggtgtg ttcccacaca
     4381 tattgcaatt catcggcaag cgtcgccaaa tcggtatcga aacgggtaaa cacggtcaga
     4441 ttgttcatgc cgaccaccac ttcctcaatc ctgtcgtgct gcccgagcgc agcggcaaac
     4501 gcccacaact tttgctgttt gcccagttcg gaaggtgcat tcagtcggca gaccaaagcg
     4561 gattcgctga ttggtgtgat ctctattctc atttgttgtt cattttggtt atgttttaat
     4621 gaatctatat gcaggggcgg cggtttgtca atatcttctg tgctgcatca tcaaaccgtc
     4681 gattggaaaa gtgctgccct gccgctgcac tttttcagac gaccttaaac cgtttctatt
     4741 aaaatagcgc attccacttt tcagacggca tctctatgtt tcccgaccaa tccgccccca
     4801 acctgctgca aggcttgaat cccgaacaac tttccgccgt aacctggccg ccgcaatccg
     4861 cccttgtgct ggcaggcgcg ggcagcggca aaacgcgcgt gctgaccacg cgtatcgcat
     4921 ggcttttgca aaccggtcag gcaagcgtgc acagcattat ggcggtaacg tttaccaaca
     4981 aagccgccaa agaaatgcag acccgtttgg gcgcgatgat tcccgtcgac gtccgcgcta
     5041 tgtggctcgg cacgttccac ggcctctgcc accgctttct acggctgcac caccgcgatg
     5101 ccggtttgcc gtcttccttt caaatcctcg acggcggcga ccagctttcc ctcatcaaac
     5161 gcctgctcaa aagcctcaac atcgccgaag aaatcatcgc gccgcgttcg ctgcaaggct
     5221 ttatcaacgc gcaaaaagaa tccggtttgc gcgcttccgt cttgagtgcg cccgatccgc
     5281 acacaagccg catgattgaa tgctacgccg aatacgacaa aatctgccaa cgcgaaggcg
     5341 tggtcgattt tgccgaactc atgctccgca gctacgaaat gctgcaaagc aacgaaatcc
     5401 tgcgccagca ttaccaaaac cgcttcaacc acattctcgt cgacgagttc caagacacca
     5461 acaaactgca atacgcctgg ctcaaactca tggcgggcgg caacgcggca gtgtttgccg
     5521 tcggcgacga cgaccaaagc atctaccgct tccgtggcgc aaacgtcggc aatatgaccg
     5581 cgctgatgga agagttccat atcaacgcgc ccgtcaaact cgaacaaaac taccgctctg
     5641 tcggcaacat ccttgccgcc gccaatgccg ttatcgaaaa caacgacgaa cgactcggca
     5701 aaaacctgcg caccgacgcc gaagcaggcg acaaaattcg ctactactcc gcctttaccg
     5761 acctcgaaga agcccggttc atcgtggacg aaaccaaagc cctcgaacgc gaaggctggg
     5821 atttggacga aatcgccgtc ctctatcgca gcaacgccca atcccgcgtt atcgaacaaa
     5881 gcctgttccg cagcggcatc ccttacaaaa tctacggcgg cctgcgcttt tatgaacgcc
     5941 aagaaatcaa acacgcgctc gcctaccttc gcctcgccgt taatcccgac gacgacaacg
     6001 ccctcttgcg cgtcatcaac ttcccgccgc gcggcatcgg cgcacgcacc atcgaaaacc
     6061 ttcagacggc ctcaaacgaa caaggcatca ccctttggca ggcagcctgc aacgccggcg
     6121 caaaagccac caaagtcgcc gccttcgtcc gcctcatcga agccctgcgc aaccaagtcg
     6181 gacaaatgcc cctgcccgaa atcatcgtcg gcatcctcaa agacagcggc ctgaccgaac
     6241 actacaaaac ccaaaaaggt gacaaccaag accgcctcga caacctcgac gaactcgtca
     6301 acgccgccat cgagttcaaa cccgaagaca gcaactttga aatcctgcct gaaaacattt
     6361 cagacgatcc cgccttcccc atcctcgctt tcttgagcaa cgccaccctc gaatccggcg
     6421 aaaaccaagc aggcgtgggc gaaaaagccg tccaactcat gaccgtccac gccgccaaag
     6481 gcttggaatt caacgccgtc ttcctcaccg gtatggaaga aggccgtttc cccagcgaaa
     6541 tgagccttgc cgaacgcggc ggcctcgaag aagaacgccg cctcatgtac gtcgccatca
     6601 cccgcgcccg caaacgcctc tacatcacca tggcgcaaca acgcatgctg cacggacaaa
     6661 cccaattcgg catcgtctcc cgcttcgtcg aagagatccc acccgaagta ttgcactacc
     6721 tgtccgtcaa aaagaccgcc tacgacagct acggcagccc gcgccaaacc gccgcatcca
     6781 aagacaaaat catcgacgac tacaaacagc cccaaaccta cgcaggtttc cgtatcggac
     6841 aaaacgtccg ccacgccaaa ttcggcaccg gcgtgattat cgatgccgca gataaaggcg
     6901 aatccgcccg actgaccatc aacttcggca aacagggcgt gaaagagttg gataccaagt
     6961 ttgcgaaatt ggaagcgatg taaatttgaa atgcaggctg gatactcgta tccgacaaaa
     7021 atatttgacg cgtctatcgt ttccgaaaaa ccgctgttgg aaaatgtcgg attcgagaat
     7081 ccgacctatg gcaaaaaact gtagcaagga caaggcaaaa ggccgtctga atccggtaac
     7141 aacaaatttt gccgaaacct ccgccgtcat tcccgcgcag gcgggaatcc agacctttcg
     7201 gcacgggaac ttatcggata aaaggtttct ttagattcca cgttctagat tcccgcctgc
     7261 gcgggaatga cggacggtaa aagccgggta tagataccta acccttgttt atagctgaaa
     7321 atcaataagg aagaacatta tgtcccaagt ttttaaagat tttgatttgt cctccgtatg
     7381 ggaatccgac agttgggcag atgaaaacta caaagaagcc ccgtttaccc ctgaaatttt
     7441 ggctgccgta gaaagtgaac tgggctataa attgccgcaa agttttattg aattgatggc
     7501 ggtacaaaac ggcggaatat ttgtcaaaaa ctgttttccg accacacaga gaaattcgtg
     7561 ggcgaaagat catgtgcaaa tttgcgaggt atcgggcatc ggctttgaaa aagaagggag
     7621 tttgtgcggc gaaacagggc aaaaactttg gatggaagaa tgggaatatc cgcccatcgg
     7681 cgtgtatttt gccaacgacc cgtcaggcgg tcatgccatg tttgccttgg actatcggga
     7741 gtgtggaaaa gacggcgagc cgaaagtggt gtttgtcgag caagaatcgg attttgaaat
     7801 cgtcgaactt gcccccgatt ttgaaacctt tatccgcagc ttgcggcatg aagatgagtt
     7861 tattgacgag gaaatataaa acggcggttg aaaaaccgga atcatcaagg gaaaacgggc
     7921 gaaataacgg ataatcgctt gaatccgtaa ggaaaacggt ttggtggaac gcgccatcca
     7981 agacctttgc aaagaaaaac tgtctccgac agcattgaca ttattaacag aacttatcaa
     8041 gtttggagct atctcaaata taattcggtt atccttttgt atccattaaa tcatatgctt
     8101 caattaattg ttgttctagc tcttgtacca attttgaatt gcgaattcct gacacaatct
     8161 caaattcttc tgcatctatg caaacacctg cataaatttc aataacaagg gaacgcaata
     8221 attgaagctc ttctcttgtt aaagaaataa taatgtcatc acctgtgtaa ttgattatat
     8281 tcataataat tttatttttg tttgtcaaag taagttttgc ctaaggttgg tctaaatgca
     8341 gttccaccat cttttgaatt tgggtctctg attacaattg ctccagactt atcatcccaa
     8401 attgctctta tgtgtttgga ttgtaatctt cgaattccca agaaaaaaat cgtaataagt
     8461 ttgaaagtgt caaatcccaa gtttcttttg agcaatattc taatatttta tcaatttcac
     8521 ttttaataat cttatgatca aactgttcta atattaatgc attagaccaa aaaaaacctt
     8581 ctttattaca atgatgggaa atccatttag gagaacaaat gcaaagtgaa aaaatagatg
     8641 agccttgttc tccttcgatt ccgatatcca aatctatcca tctatggaaa ttatctggaa
     8701 tttcgggggt aaatttttca aaatcaatat catataaatt tatgcttttt aaatccaatt
     8761 taatcattag ggctgtccta gataaatagg g
//
LOCUS       DAWITQ010000077         8692 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.077, whole genome shotgun sequence.
ACCESSION   DAWITQ010000077 DAWITQ010000000
VERSION     DAWITQ010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8692)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8692)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8692
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.077"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            191..1726
                     /locus_tag="WIX18_001326"
     CDS             191..1726
                     /locus_tag="WIX18_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEZ5238427.1"
                     /translation="MSDSKTKERATFGTRRAFMIAAIGSAVGLGNIWRFPYIAFENGG
                     GAFILPYLVALLTAGIPLLLLDYAIGHRYRGSAPLAFRRLGRWFEPVGWWNVMTNIVI
                     CIYYAVIIGWAASYTYYSVNAAWGADPQGFFFKDFLQMAGPEALGLDFVGKVAGPLAG
                     VWVFTAAIMALGVQKGVARASSFFMPLLLVMFLIMVGISLTLPGAAKGLDALFTPDWS
                     KLADSKVWVAAYGQIFFSLSICFGIMVTYSSYLKKKTDLGGTGLVVGFANSSFELLAG
                     IGVFAALGFMAQAGGKAVNEVASGGIGLAFIAFPTIINQAPMGWLIGILFFGSLVFAG
                     VTSMISILEVIVAAIQDKLNIGRVNATLLVCIPMGIVSTLLFGTATGLPVLDVMDKFV
                     NTYGIVAAGFVYVAAIIISGRLPELRKHLNALSSIRIGGLWTVCVVVTVVMLGYMLFK
                     DTSGLMEKNYEGYPDGFLSIFGWGMSAALVVFGLLLSLLPWKHGQDFNVKDEHEHEQG
                     EEK"
     gene            1723..1815
                     /locus_tag="WIX18_001327"
     CDS             1723..1815
                     /locus_tag="WIX18_001327"
                     /inference="COORDINATES: protein motif:HMM:NF033493.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine/alanine import family NSS transporter
                     small subunit"
                     /protein_id="HEZ5238428.1"
                     /translation="MSTSAIVMMIVSIVIIWGGLLLSLLRLPNE"
     gene            complement(1851..3095)
                     /gene="lysA"
                     /locus_tag="WIX18_001328"
     CDS             complement(1851..3095)
                     /gene="lysA"
                     /locus_tag="WIX18_001328"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HEZ5238429.1"
                     /translation="MTLFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAELS
                     PLVCYAVKANGNLSIIKHFASLGSGFDIVSGGELARVLAAGGDATKTIFSGVGKNEAE
                     IEFALNAGVKCFNMESIPEIDRIQKVAARLGKTASVSLRVNPDVDAKTHPYISTGLKA
                     NKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLTDLSPLVEACERILILVDALAA
                     EGIVLEHLDLGGGVGIVYQDENVPDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGS
                     LLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAVETKDIEPLTANIVGPIC
                     ETGDFLGKDRTIACEEGDLLLIRSAGAYGASMASNYNARNRAAEVLVDGNEYRLIRRR
                     ETLEQQMANELACLQAEHQNAV"
     gene            complement(3106..3276)
                     /locus_tag="WIX18_001329"
     CDS             complement(3106..3276)
                     /locus_tag="WIX18_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HEZ5238430.1"
                     /translation="MKYGVFFAAATALLLSACGYKGDLYLPKEGDTARFGAIQTGLQL
                     QNKPQSAPQTRK"
     gene            3347..3670
                     /gene="cyaY"
                     /locus_tag="WIX18_001330"
     CDS             3347..3670
                     /gene="cyaY"
                     /locus_tag="WIX18_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HEZ5238431.1"
                     /translation="MMTESEFIRASEALFEHIEDQIDENGWDFDCRFAGNVLTIEAEN
                     GTQIIVNRHTPNQELWIAAKSGGYHFAEQNGKWLATRDGRDFYDVLNEALSAASGEAV
                     EIEEL"
     gene            3697..4713
                     /locus_tag="WIX18_001331"
     CDS             3697..4713
                     /locus_tag="WIX18_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HEZ5238432.1"
                     /translation="MNTRPFYFGLIFIAIIAILANYLGNTDFSHHYHISALIIAILLG
                     MAIGNTIYPQFSTQVEKGVLFAKGALLRTGIVLYGFRLTFGDIADVGLNAVVTDAIML
                     ISTFFFTALLGIRYLKMDKQLVYLTGAGCSICGAAAVMAAESVTKAESHKVSVAIAIV
                     VIFGTLAIFTYPLFYTWSQDLINAHQFGIYVGSSVHEVAQVYAIGENINPIVANTAVI
                     SKMIRVMMLAPFLLMLSWLLTRSDGVSENTSHKITIPWFAVLFIGVAIFNSFDLLPKE
                     LVKLFVEIDSFLLISSMAALGLTTQASAIKKAGLKPFVLGILTYLWLVVGGFLVNYGI
                     SKLI"
     gene            4739..5158
                     /locus_tag="WIX18_001332"
     CDS             4739..5158
                     /locus_tag="WIX18_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2251 domain-containing protein"
                     /protein_id="HEZ5238433.1"
                     /translation="MAQLPLYRTAEIENFTVGTPEVLESFSKHIPYGVVFEDDGDTGY
                     FYAASQDGILDALHIYNVEDVSDKHIPNHVLILWDDACTIAALCINDYIHAVYDFVEQ
                     AGYCRNGFPEAQGEWPKVTDRVLDDELQDKILSRKPT"
     gene            5180..5686
                     /gene="luxS"
                     /locus_tag="WIX18_001333"
     CDS             5180..5686
                     /gene="luxS"
                     /locus_tag="WIX18_001333"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HEZ5238434.1"
                     /translation="MPLLDSFKVDHTRMHAPAVRVAKTMTTPKGDTITVFDLRFCVPN
                     KEILPEKGIHTLEHLFAGFMRDHLNGNGVEIIDISPMGCRTGFYMSLIGTPSEQQVAD
                     AWLASMQDVGNVKDQSKIPELNEYQCGTYQMHSLAEAQQIAQNVLAHKVAVNKNEELT
                     LDEGLLNA"
     gene            5831..8620
                     /gene="polA"
                     /locus_tag="WIX18_001334"
     CDS             5831..8620
                     /gene="polA"
                     /locus_tag="WIX18_001334"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HEZ5238435.1"
                     /translation="MSNRPTLLLVDGSSYLYRAYHAMAQLTAPDGAPTGAMYGVLNML
                     RRLRADYVHDYCAVVFDAKGKNFRHEMFPDYKATRPPMPDDLRPQAEALPDLVRLIGW
                     PVLVIPQVEADDVIGTLAAMAGEAGWNVVVSTGDKDMAQLVNERVTLVNTMSGETLDI
                     EGVKAKFGVRPDQIRDYLALMGDKVDNVPGVEKCGPKTAVKWLEAYGSLAGVMEHAAE
                     IKGKVGENLRAALQRLPLSYDLVTIKTDVDLHTELSDGIESLRRTAPKWAQLVVDFKR
                     WGFRTWLKEAESRMHEAADGDLFGSDSIGEQAALNAEVPSEKQPELAPTPEKLDYQAV
                     TTEAQLAALLDKLSQADTIGIDTETTSLDAMNASLVGISIAFQAGEAIYIPVGHSLTA
                     APEQIDLQDVLGRLKPHLENPALKKIGQNLKYDQHVFANYGIALNGIAGDAMLASYII
                     ESHLGHGLDELSERWLGLETITYESLCGKGAKQISFADVAIGQATEYAAQDADFALRL
                     EAHLRAQMDAKQLEMYEKMELPVAQVLFEMERNGVQIDRAELSRQSAELGAELMKLEQ
                     EAYAVAGQPFNLNSPKQLQEILFDKMGIPTKGLKKTAKGGISTNEAVLEQLAPDYPLP
                     KIILQNRSLAKLKSTYTDKLPEMISPKDGRVHTTYAQAVAITGRLASNNPNLQNIPIR
                     TAEGRRVRRAFTAPQGSVIVSADYSQIELRIMAHLSGDKTLITAFQNGEDVHRRTAAE
                     VFGIAPENVSSEQRRYAKTINFGLIYGMGQYGLAKSLGIDNISAKTFIDRYFARYPGV
                     AEYMQRTKEQAAAQGFVETLFGRRLYLPDIRNKNANARAGAERAAINAPMQGTASDLI
                     KRAMIDVRNCLSDGIGSKLVMQVHDELVLEVVETELDFVKEKLPQIMAKVDGGLLDVP
                     LVAEVGVGENWEEAH"
BASE COUNT         2033 a         2277 c         2292 g         2090 t
ORIGIN      
        1 aaatttttcg ttttcaagcc ttcaccgctt gccatcagcg ttaaattttt ttacgataag
       61 cacatagatt gtaaacaatc ggccacaagc cggtttgttt tttcagaaga cattatccct
      121 gtcagacgct atttctatat atttcgccta taatggcttg tttttaataa ataattcaaa
      181 aggtatcaac gtgtctgatt ccaagacgaa agaacgcgcc acattcggca cgcgccgcgc
      241 gtttatgatt gccgccatcg ggtccgccgt cggcttgggc aatatttggc gtttccccta
      301 tattgctttt gaaaacggcg gcggcgcgtt catcctgccc tatctggtcg cgcttctgac
      361 ggcgggcatc ccgctgctgc tgctcgatta tgccatcggc caccgttacc gtggttctgc
      421 gcccttggct ttccgccgcc tcggacgatg gtttgagccg gtcggctggt ggaacgtgat
      481 gaccaatatc gtcatctgca tctattacgc ggtaattatc ggttgggcgg caagctatac
      541 ctattattcg gtcaacgccg cctggggtgc ggatccgcag ggttttttct ttaaggactt
      601 cctgcaaatg gcgggcccgg aagccttggg tttggatttt gtcggcaaag tcgccggtcc
      661 tttggcgggc gtgtgggttt ttaccgccgc cattatggcg ttgggcgtgc aaaagggcgt
      721 ggcgcgcgcc tcgtcgttct ttatgccgct gcttttggtg atgtttttga ttatggtcgg
      781 catttcacta accctgccgg gtgcggcaaa gggcttggac gcattgttta cgcccgactg
      841 gtcgaaactc gccgattcca aggtctgggt ggcggcatac gggcagattt tcttttcgct
      901 ttccatctgc ttcggcatta tggttaccta ttcttcttat ttgaagaaaa aaaccgactt
      961 gggcggaacg gggctggtgg tcggttttgc caacagcagc tttgaactgc tcgcgggcat
     1021 cggcgtgttt gccgcattgg gctttatggc gcaggcgggc ggtaaggcgg tcaacgaggt
     1081 tgcctcaggc ggcatcggtt tggcgtttat cgcctttccg accattatca accaggcacc
     1141 gatgggctgg ctgatcggca tattgttttt cggttcgctg gtattcgccg gcgttacgtc
     1201 gatgatttcc atccttgaag tgattgtggc ggcgattcag gacaagctga acatcgggcg
     1261 cgtcaacgcc acgctgctgg tctgcattcc gatgggcatt gtttccacgc tgctgttcgg
     1321 tacggcgacg gggctgccgg ttttggacgt gatggacaaa ttcgtcaaca cctacggcat
     1381 tgttgccgcc ggctttgttt atgttgccgc catcatcatc agcggcaggc tgccggaatt
     1441 acgcaagcac ctgaacgctt tgtcctccat ccgcatcggc ggcttgtgga cggtctgcgt
     1501 cgtggttacc gtcgtgatgc tcggctatat gctgtttaaa gataccagcg gcctgatgga
     1561 gaaaaattac gaaggttatc cggatggttt cctcagtatt ttcggctggg ggatgtcggc
     1621 ggcgttggtc gtgttcgggc tgctgctgtc gttgctgcct tggaaacacg gtcaggattt
     1681 caacgtcaaa gacgaacacg aacatgaaca aggagaagaa aaatgagtac ttccgccatt
     1741 gtgatgatga ttgtctcaat cgtgataatc tggggagggc tgctgctttc cctgttaagg
     1801 ctgccgaacg agtaagcctt tagagcgtta aaaatgccgt ctgaaccgct tcagacggca
     1861 ttttgatgtt cggcttgcag gcaggcgagt tcgtttgcca tttgctgttc caaggtttcg
     1921 cgccggcgga tgagtcggta ttcgttgccg tccaccaaca cctctgccgc acggttgcgc
     1981 gcgttgtaat tgctcgccat actggctccg tatgcgcccg cgctgcggat aagcagcaaa
     2041 tcgccttctt cgcaggcgat ggtgcggtct ttgccgagga agtcgccggt ttcgcaaatc
     2101 ggaccgacga tgttggcggt cagaggctca atgtctttgg tttcgaccgc ctcgatgtga
     2161 tgataggcat cataaagcgc cgggcgcatc aaatcgttca tcgccgcatc gaccatcaca
     2221 aagtttttct cttcgccgta tttgacgaat tcgacgcgtg tcagcagcga acctgcgttg
     2281 ccgaccaagc tgcggccggg ctcaagaatg agtttcagac ggcgtgtgcc gatcagtttt
     2341 tgaacggctt gggcatacgc gcccaaatca ggcacatttt cgtcttggta aacaatgccg
     2401 acgccgccgc ccaagtccaa gtgttccaac acaatgcctt cggcggcaag cgcgtcaacc
     2461 aaaatcaaaa tgcgctcgca ggcttcgacc agcgggctta agtcggtcag ttgcgaaccg
     2521 atgtggcagt cgatgccgat gattttcaaa ttgggctgtt gtgcggcatg gcggtaggct
     2581 tcgagcgcgt cggcgtaggc aatgccgaat ttgttggctt tcagacctgt ggagatgtag
     2641 ggatgggttt tcgcatcgac atcgggattg acgcgtaggg agacggacgc ggttttgccc
     2701 aaacgcgcgg caaccttttg aatacggtcg atttcgggaa tgctttccat attgaagcat
     2761 ttcacgcctg cattcagcgc gaactcgatt tccgcctcgt ttttgcccac gccggaaaaa
     2821 atcgttttcg tcgcgtcgcc gcctgccgcc aaaacgcgtg ccaattcgcc gccggacaca
     2881 atgtcaaaac cgctccccaa agaagcaaag tgtttgatga tgctcaggtt gccattggct
     2941 ttaaccgcat agcagacgag cggggagagc tcggcaaagg cagtttggta gtgttcaaat
     3001 gcttcggtca gcgcggattg gctgtacaca taaagcggtg tgccgaatgc ttcggcaagg
     3061 cgggggtagg ggacttgttc gcaaaacagg gtcatatctt cgttttcatt ttcgggtttg
     3121 tggggcggat tgcggtttgt tttgaagctg caaaccggtt tggattgcgc cgaaacgcgc
     3181 cgtatcgcct tctttgggca ggtagaggtc gcctttgtaa ccgcaggcgg aaagcaggag
     3241 ggcggttgcc gccgcaaaaa atacgccgta tttcatcggt aaacttcctt cataagcgcg
     3301 aatgtggcaa gattcggtat cttaaacaaa aaccacacaa aaagccatga tgaccgaaag
     3361 cgagtttatc cgcgcgagcg aagcattatt tgaacacatc gaagaccaaa tcgacgaaaa
     3421 cggctgggat ttcgactgcc ggtttgccgg aaacgtcctg accatcgaag ccgaaaacgg
     3481 cacgcaaatc atcgtcaacc gccacacgcc caaccaagaa ttatggattg ccgccaaaag
     3541 cggtggctac catttcgccg aacaaaacgg caaatggctg gcaacgcgcg acggacggga
     3601 tttttacgac gttttaaacg aagccctgag cgcggcttcg ggcgaagcgg tagagattga
     3661 ggaattgtga tttgggtgtt atcacggaaa gaaaaaatga acacacgtcc cttttatttc
     3721 ggacttatat ttatcgcgat tattgctata cttgctaact atttaggaaa cactgatttt
     3781 tcccatcatt atcatatcag tgctttaatt attgctatct tgctgggaat ggcaatcggc
     3841 aataccattt atccgcaatt ttcaacacaa gtggaaaaag gtgttttgtt tgccaaaggc
     3901 gcgcttcttc gcactggcat tgtgttgtat ggttttcgcc tcacttttgg cgatattgcc
     3961 gatgtaggat taaatgcggt tgtcactgat gcaatcatgc taatttcaac cttctttttt
     4021 accgcacttt taggcattcg ttatctaaaa atggataaac aattggttta tctcactggg
     4081 gcaggttgca gcatttgcgg tgcggcagcg gttatggcgg cagagtctgt taccaaagca
     4141 gaatcccata aagtttcagt ggcgattgcc atagtggtca ttttcgggac gcttgctatt
     4201 tttacttacc ccttgttcta cacgtggtca caagatttaa ttaacgccca tcaattcggt
     4261 atttatgttg gttctagtgt acacgaagtg gctcaagtgt atgcgattgg ggaaaatatt
     4321 aatcctatcg tggcgaatac tgccgtcatt tccaaaatga tccgagtgat gatgctcgcc
     4381 ccctttttat taatgctttc ttggttatta acacgtagtg atggggtatc agaaaatacc
     4441 tcacacaaaa ttacaattcc ttggtttgct gtacttttta ttggtgttgc catttttaat
     4501 tcttttgatt tattaccaaa agaactcgtg aaattattcg ttgaaatcga ttctttctta
     4561 ttaatttcat caatggctgc gcttggctta acgacgcaag caagcgcaat caaaaaggca
     4621 ggattaaaac cgtttgtttt aggaatacta acttatttat ggctagtggt tggtggattt
     4681 ttagtgaact atggaatatc aaaattaata taaaattcac taaagagagc gttacccaat
     4741 ggcacaatta cccctgtatc ggactgccga aatcgaaaat tttactgtcg gcacgcccga
     4801 agttttagaa tcattttcca aacatatccc ttatggtgtt gtctttgaag acgacggcga
     4861 cacaggctac ttctatgccg cttcgcaaga cgggatttta gatgccttgc acatttacaa
     4921 tgtcgaagat gtatccgata aacatatccc caatcatgtc ttgattttat gggatgatgc
     4981 ctgcaccata gccgcattgt gtatcaacga ctacattcat gccgtctatg attttgtcga
     5041 acaggcagga tattgccgca acggcttccc tgaagcacaa ggcgaatggc cgaaagtcac
     5101 agaccgcgta ttggacgatg aattgcagga caaaatccta tcccgaaaac ctacataacc
     5161 tactcaaaag gataacccaa tgcccctact agacagtttc aaagtcgatc acacccgtat
     5221 gcacgccccc gccgtacgcg tggcgaaaac catgaccacg cccaaaggcg acaccattac
     5281 cgtattcgac ctgcgtttct gcgtgcccaa caaagaaatc ctgcccgaaa aaggcatcca
     5341 cacgctggag catttgttcg ccggttttat gcgcgaccac ttgaacggca acggcgtgga
     5401 aattatcgac atttccccga tgggctgccg caccggtttc tacatgagcc ttatcggcac
     5461 gccttccgaa cagcaggtcg ccgatgcatg gctcgcctcg atgcaggatg tgggcaatgt
     5521 caaagaccaa agcaaaatcc ccgagttgaa cgaataccaa tgcggcactt atcaaatgca
     5581 ctcgctcgcc gaagcgcagc aaatcgcgca aaacgtgttg gcgcacaaag tggcggtgaa
     5641 caaaaacgaa gagctgacgc tggatgaagg gctgctgaac gcctaatccg ccaaaaatgc
     5701 cgtctgaaca agggtttcag acggcatttg ccttttccgt tataatccgg ggttgtgcgg
     5761 ggtcgggttt taagccggca tcgtccttcc ctattttttc tgtcccttat cggttttaag
     5821 cgggtttttt atgtccaaca gacctacact cctcctcgtt gacggctcgt cctacctcta
     5881 ccgcgcgtat cacgcgatgg cgcagttgac cgcgcccgat ggtgcgccga cgggcgcgat
     5941 gtatggcgtg ttgaacatgc tgcgccggtt gcgggcggat tatgtgcatg attattgcgc
     6001 ggtggtgttt gatgcgaagg gcaagaattt ccgccacgag atgttccccg actacaaggc
     6061 gacgcgcccg ccaatgccgg acgatttgcg tcctcaagcg gaagccttgc cggatttggt
     6121 gcggttgata ggctggccgg tgctggtgat tccgcaagtc gaagcggatg acgtgattgg
     6181 cacgctggcg gcaatggcag gcgaagcagg ttggaatgtg gtggtgtcca ccggcgataa
     6241 ggacatggcg cagttggtga acgaacgcgt aacgctggtg aacacgatga gcggcgaaac
     6301 gctggacatt gaaggtgtga aggcgaaatt cggcgtgcgc cccgaccaaa tccgcgatta
     6361 tctcgcgctg atgggcgaca aggtggacaa cgtgccgggc gtggaaaagt gcggcccgaa
     6421 aacggcagtg aaatggctgg aagcctacgg ctcgctggcg ggcgtgatgg aacacgcggc
     6481 ggaaatcaag ggcaaagtgg gcgagaatct gcgtgccgcc ctgcagcgcc tgccgctgtc
     6541 gtatgatttg gtgacgatta aaaccgatgt ggacttgcac accgaacttt cagacggcat
     6601 cgaaagcctg cgccgtaccg cgccgaaatg ggcgcaactg gttgtcgatt tcaaacgctg
     6661 gggcttccgc acctggctga aagaagcgga aagtcgtatg cacgaagcgg cggacggtga
     6721 tttgttcggc agcgacagca tcggcgagca ggcggctttg aatgcggagg tgccgtctga
     6781 aaaacaaccc gaacttgccc cgacccccga aaaactggat tatcaagccg ttaccaccga
     6841 agcgcagctt gccgccttgt tggacaaact gtcgcaggcg gacacaatcg gcatcgatac
     6901 ggaaaccacg tcattagacg cgatgaacgc ctcgttagtc ggcatcagca tcgcgttcca
     6961 agcaggcgaa gcgatttaca tccccgtagg gcacagcctg accgctgcac ccgaacagat
     7021 tgatttgcaa gacgtattag gccgtctgaa accgcatttg gaaaaccccg ccctgaaaaa
     7081 aatcgggcaa aacctcaaat acgaccaaca cgttttcgcc aactacggca ttgccttaaa
     7141 cggcattgcc ggcgacgcga tgcttgcttc ctacatcatc gaaagccacc tcggacacgg
     7201 cttggacgaa ttgtccgaac gctggctggg cttggaaacc attacctacg aatcgctgtg
     7261 cggcaaaggc gcgaagcaaa tcagttttgc cgatgtcgcc atcggacagg cgaccgaata
     7321 cgccgcccaa gacgccgatt tcgccctgcg cctcgaagcg catctgcgtg cgcaaatgga
     7381 cgccaaacag cttgaaatgt atgaaaaaat ggagctgccc gtcgcgcagg tattgtttga
     7441 aatggaacgc aacggcgtgc aaattgatcg cgccgaactc tcccgccaaa gcgcggaact
     7501 cggcgcagag ctgatgaagc tcgaacaaga agcctatgcc gtcgcaggcc agccgtttaa
     7561 cctcaactcg cccaaacagc tccaagaaat cctgttcgac aaaatgggca ttcccaccaa
     7621 aggcctgaaa aaaaccgcca aaggcggcat ttccaccaac gaagccgtgc tcgaacagct
     7681 cgcacccgac taccccctgc ccaaaatcat cctgcaaaac cgcagcctgg cgaagctcaa
     7741 atccacctac accgacaaac tgcccgaaat gatttccccc aaagacggcc gcgtgcatac
     7801 cacctacgcc caagccgtcg ccattaccgg ccgtctcgcc agcaacaacc ccaacctgca
     7861 aaacatcccc atccgcaccg ccgaaggccg ccgcgtgcgc cgcgccttta ccgcaccgca
     7921 aggcagcgtc atcgtttccg ccgactattc ccaaatcgag ctgcgcatca tggcgcacct
     7981 ctccggcgac aaaaccctga ttaccgcgtt ccaaaacggc gaagacgtac accgccgcac
     8041 cgccgccgaa gtgttcggca ttgcccccga aaacgtctcg tccgaacaac gccgctacgc
     8101 caaaaccatc aacttcggtc tcatttacgg catgggccaa tacggcctcg ccaaatcatt
     8161 gggtatcgac aacatctccg ccaaaacctt catcgaccgc tacttcgccc gctatcccgg
     8221 cgtcgccgaa tacatgcagc gcaccaaaga acaagcagca gcgcaaggct tcgtcgaaac
     8281 tctgttcggc cgccgcctct acctgcccga catccgcaac aaaaacgcca acgcccgcgc
     8341 cggagccgaa cgcgccgcca tcaacgcccc catgcaaggc accgcctccg acctcatcaa
     8401 acgcgccatg atagacgtgc gaaactgtct ttcagacggc atcggcagca aactggtcat
     8461 gcaggtgcat gacgaactgg tgctggaagt cgttgaaacc gaactggatt ttgtcaaaga
     8521 aaaactgccg cagattatgg cgaaagtgga cggcggatta ttggatgtac cgctggtggc
     8581 tgaggttggc gtaggggaga attgggaaga ggcacattga ttgaaaggtg ttatatgcta
     8641 tctttattta aataaaattt aatttttggt atattttttc taaatgttcc ta
//
LOCUS       DAWITQ010000078         8648 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.078, whole genome shotgun sequence.
ACCESSION   DAWITQ010000078 DAWITQ010000000
VERSION     DAWITQ010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8648)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8648)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8648
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.078"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..142)
                     /locus_tag="WIX18_001335"
     CDS             complement(<1..142)
                     /locus_tag="WIX18_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin family protein"
                     /protein_id="HEZ5238436.1"
                     /translation="MNILLLDGGKAFGHSHGGLNRTLHKKAKEVLTALGHNVQETVID
                     AGY"
     gene            381..1280
                     /gene="crgA"
                     /locus_tag="WIX18_001336"
     CDS             381..1280
                     /gene="crgA"
                     /locus_tag="WIX18_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_151940473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator CrgA"
                     /protein_id="HEZ5238437.1"
                     /translation="MKTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEK
                     LGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLRVDSAMP
                     MVLHLLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLF
                     DSRFRVIASPEYLAKHGTPQSAEELAGHQCLGFTEPGSLNTWAVLDAQGNPYKISPHF
                     TASSGEILRSLCLSGCGIACLSDFLVDNDIAEGKLIPLLAEQTSNKTHPFNAVYYSDK
                     AVNLRLRVFLDFLVEELGNNLCG"
     gene            complement(1507..4722)
                     /gene="carB"
                     /locus_tag="WIX18_001337"
     CDS             complement(1507..4722)
                     /gene="carB"
                     /locus_tag="WIX18_001337"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEZ5238438.1"
                     /translation="MPKRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKV
                     ILVNSNPATIMTDPEMADVTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDL
                     ARNGVLAKYNVELIGATEDAIDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQE
                     QVGFPTLIRPSFTMGGSGGGIAYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEM
                     EVVRDKNDNCIIICSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIG
                     VDTGGSNVQFAVNPENGEMIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGFTLDE
                     LRNDITGGKTPASFEPSIDYVVTKIPRFAFEKFPAADDRLTTQMKSVGEVMAMGRTIQ
                     ESFQKALRGLETGLCGFNPRSSDKAEIRRELANPGPERMLFVADAFRAGFTPEEIHEI
                     CAIDPWFLAQIEDLVKEEKSVSDGILSDLDFAALRRLKRKGFSDKRIAQLLGVKEKEV
                     REHRYALKLHPVYKRVDTCAAEFATETAYLYSTYEEECESRPSDRKKVMILGGGPNRI
                     GQGIEFDYCCVHAALALRESGFETIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIV
                     RTENPWGVIVHYGGQTPLKLANALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLR
                     QPPNRIAHNEEEALVKAEEIGYPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSE
                     DSPVLLDFFLNNAIEVDVDCVSDGKDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEE
                     IQDEIRRQTKAMAYALGVVGLMNVQFAVQDGVVFVLEVNPRASRTVPFVSKATGVPLA
                     KVGARCMAGISLKEQGVEKEVVPDFYAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGV
                     GASFGEAYYKAQLGAGERLNPTGKIFLSVREEDKERVIKTAKNFQALGYGICATRGTA
                     QYLTEHGLIVQTINKVPEGRPHIGDALKNGEIALVVNTVSSDPQSVSDSHIIRQSALQ
                     QRVPQYTTTAGGEAMSEGAKSRDHLGVYSVQELHGRLKNRS"
     gene            complement(4751..5392)
                     /locus_tag="WIX18_001338"
     CDS             complement(4751..5392)
                     /locus_tag="WIX18_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238439.1"
                     /translation="MSIPINFNNLKYLLNDMRNKNRIIEAFPFNYNQRQYAVILTRYK
                     PDEPRPDDYAQAKLEFFNLNSENSIFAYADFYEVHFKSATDFINFFKINVQAGAAKIR
                     EIFQSFSNLFADFIPTQTKKDLDIIYKKIVATRLEPNSPNTIYCYDVRRNGKDKAGKP
                     NRRSVENSEKAKILRPELYEKFKADSNYSFFFSDNPSDEKTDAEIIREVTNRQ"
     gene            5554..5952
                     /locus_tag="WIX18_001339"
     CDS             5554..5952
                     /locus_tag="WIX18_001339"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238440.1"
                     /translation="MRYVCTRSPFSLQPQPTACVPCGTLSADEFKGRLKKRSQRLFHL
                     PCDKGCLKHSRCRCFGHSFSDDLQRLNLLQPTPSPVGEGWGEGILRISATFPNTLTAK
                     TQALWLVALSLTLSHGREDWAVVGAKVSVN"
     gene            complement(6060..6449)
                     /locus_tag="WIX18_001340"
     CDS             complement(6060..6449)
                     /locus_tag="WIX18_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HEZ5238441.1"
                     /translation="MNPHEKLLTTDNPILRQRAKAMRQEMSGAEAKLWQHLRAGRLNG
                     YKFRRQQPMGNYIVDFMCVTPKLIVEADGGQHTEQAAYDHARTAYLNSLGFTVLRFWN
                     HEILQQTNDVLTEILLVLQELEKQAAR"
     gene            complement(7023..7148)
                     /locus_tag="WIX18_001341"
                     /pseudo
     CDS             complement(7023..7148)
                     /locus_tag="WIX18_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687282.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
     gene            complement(7194..8327)
                     /gene="carA"
                     /locus_tag="WIX18_001342"
     CDS             complement(7194..8327)
                     /gene="carA"
                     /locus_tag="WIX18_001342"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HEZ5238442.1"
                     /translation="MSTPALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILT
                     DPSYCKQIVTLTYPHIGNTGTNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYL
                     VRNKTVAIADIDTRRLTTLLREKGAQGGAILTGADATIEKAQELIAAFGSMVGKDLAK
                     EVSCTETYEWTEGEWELGKGFVTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPA
                     QTSAQDVLALNPDGVFLSNGPGDPEPCTYAIEAVQKLMESGKPIFGICLGHQLISRAI
                     GAKTLKMRFSHHGANHPVQDLDSGKVVITSQNHGFAVDADTLPANARITHKSLFDNTL
                     QGIELTDKPVFCFQGHPEASPGPQDVGYLFDKFIGNMKAAKRA"
BASE COUNT         1918 a         2210 c         2273 g         2247 t
ORIGIN      
        1 catagccggc atcaatcacg gtttcttgaa cattgtgtcc gagcgcggtc aaaacttctt
       61 tcgctttttt gtgaagcgtg cggtttaacc cgccgtgaga atgtccgaac gctttgccgc
      121 cgtctaataa taaaatattc atttgttacc tcgtttgtga attgatgaat gtattgtgcc
      181 gttttacttt ataatttaaa agtgcaaaaa taagaaaaca cttttgcgtc aaatgaaata
      241 atcagatgtt ccaacacacg ggatggcaca taaagcaccg ccctgtgtgc cgtcctgatt
      301 cggaaggggt tacacccctc ccaaataaag tctgatcctg ccgccctaaa gggcggggtt
      361 ccaaccgaaa aggaaacacg atgaaaacca attcagaaga actgaccgta tttgttcaag
      421 tggtggaaag cggcagcttc agccgtgcgg cggagcagtt ggcgatggca aattctgccg
      481 taagccgcat cgtcaaacgg ctggaggaaa agttgggtgt gaacctgctc aaccgcacca
      541 cgcggcaact cagtctgacg gaagaaggcg cacaatattt ccgccgcgcg cagagaatcc
      601 tgcaagaaat ggcagcggcg gaaaccgaaa tgctggcagt gcacgaaata ccgcaaggcg
      661 tgttgcgcgt ggattccgcg atgccgatgg tgctgcatct gctggcgccg ctggcagcaa
      721 aattcaacga acgctatccg catatccgac tttcgctcgt ttcttccgaa ggctatatca
      781 atctgattga acgcaaagtc gatattgcct tacgggccgg agaattggac gattccgggc
      841 tgcgtgcacg ccatctgttt gacagccgct tccgcgtaat cgccagtcct gaatacctgg
      901 caaaacacgg cacgccgcaa tctgcagaag agcttgccgg tcaccaatgt ttaggcttca
      961 ccgaacccgg ttctctaaat acatgggcgg ttttagatgc gcagggaaat ccctataaga
     1021 tttcaccgca ctttaccgcc agcagcggtg aaatcttacg ctcgttgtgc ctttcaggtt
     1081 gcggtattgc ttgcttatca gattttttgg ttgacaacga catcgctgaa ggaaagttaa
     1141 ttcccctgct cgccgaacaa acctccaata aaacgcaccc ctttaatgct gtttattaca
     1201 gcgataaagc cgtcaacctc cgcttgcgcg tatttttgga ttttttagtg gaggaactgg
     1261 gaaacaatct ctgtggataa ttctataaaa acctgccata aaattgtttt tactcactta
     1321 ataactttga gaaaaaataa ataagatgat gtatagtcgg cggcaatggc agtctatatg
     1381 gggagcgtga tagggctgtt ccttatgtac ggcttgtgtg tggcaacatc ggctttccaa
     1441 atgacaaaat gccgtctgac accgtaaaaa aaggtttcag acggcatttt caacccgatt
     1501 caggcatcag ctgcggtttt tcaaacgccc gtgcagttct tgaacgctgt acacgcccaa
     1561 gtggtcgcgg cttttcgcgc cttcgctcat cgcttcgccg cccgcagtag tggtgtattg
     1621 cggcacacgt tgctgcaatg cgctttggcg gatgatgtgg ctgtcggaca cggattgcgg
     1681 atcgctggaa acggtattca cgaccagtgc gatttcgccg tttttcagcg cgtcgccgat
     1741 gtgcgggcgg ccttcgggga ctttattgat ggtttgtaca atcagcccgt gttcggtcag
     1801 gtattgcgcc gtgccgcgcg tggcgcagat gccgtagcct aaggcttgga agtttttggc
     1861 ggttttaatg acgcgttctt tgtcttcttc gcgcacggag aggaagattt tgccggtcgg
     1921 gttgaggcgt tcgcccgcgc cgagttgggc tttgtagtag gcttcgccaa agcttgcgcc
     1981 cacgcccatg acttcgccgg tggagcgcat ttccggtccc aaaatcgtat ccacgcccgg
     2041 gaatttgatg aatgggaaca cggcttcttt aacggcatag aaatcgggga caacttcttt
     2101 ttccacgcct tgttctttca gggaaatgcc tgccatgcag cgcgcgccga ctttggcgag
     2161 cggcacgccg gtggctttgg agacgaaggg cacggtgcgg ctggcgcgcg ggttcacttc
     2221 caatacgaac accacgccgt cttgtacggc aaactgcacg ttcatcagtc cgaccacgcc
     2281 cagcgcgtac gccatcgctt tagtttggcg gcggatttcg tcttggattt cttcgcttaa
     2341 ggagtagggc ggcagcgagc agccggagtc gccggagtgg atgcccgcct gttcgacgtg
     2401 ctgcatgatg ccgccgataa ccacgtcttt gccgtctgaa acgcagtcca catccacttc
     2461 aatcgcgttg ttgaggaaga aatcgagcaa cacggggctg tcttcggaaa cctgcacggc
     2521 ttcgcgcatg tatttttgca aggcttcggc agagtggaca atctgcatcg cgcgtccgcc
     2581 caaaacataa gacgggcgca cgaccagcgg atagccgatt tcttcggctt tgacgagtgc
     2641 ttcttcttcg ttgtgggcga tgcggttggg cggttggcgc agacctaagt cgttcaacac
     2701 tttttggaag cgttcgcggt cttcggcggc gtcgatgctg tcggcggacg tgccgatgat
     2761 gtttacgccg ttttcaacca gcgcgttggc gagtttgagc ggggtttgac cgccgtaatg
     2821 cacaatcacg ccccacgggt tttcggtgcg gacgatttcc aacacgtctt ccaatgtcag
     2881 cggctcgaaa tagaggcggt cgctggtgtc gaagtcggtg gacacggttt ctgggttgca
     2941 gttgaccata atcgtttcaa aaccggattc gcgcagggcg agcgcggcgt gaacgcagca
     3001 gtagtcaaac tcgatgccct gaccgatgcg gttcgggccg ccgccgagaa tcatcacttt
     3061 tttacggtcg gaaggacggg attcgcattc ttcttcgtaa gtggagtaaa gataggcggt
     3121 ttcggtggcg aactcggcgg cgcaggtgtc aacgcgtttg taaaccggat gcagcttcag
     3181 cgcgtagcgg tgttcgcgca cttctttttc ttttacgccc aaaagctgcg cgatgcgttt
     3241 gtcggagaag cctttgcgtt tcagacggcg tagggcggcg aaatccaaat cactcaaaat
     3301 gccgtctgaa accgattttt cttctttcac caagtcttcg atttgcgcca agaaccaagg
     3361 gtcgatggcg cagatttcgt ggatttcttc cggcgtgaag cccgcgcgga acgcgtctgc
     3421 cacaaacagc atgcgctcgg ggccggggtt tgccagttcg cggcggattt ccgctttgtc
     3481 ggagcttctc ggattgaagc cgcacaagcc tgtttccaag ccgcgcaggg ctttttggaa
     3541 actttcctga atcgtgcgtc ccatcgccat cacttcgccc accgatttca tctgcgtggt
     3601 caggcggtcg tctgcggcag ggaatttttc aaacgcaaaa cgcgggattt tggttaccac
     3661 atagtcgatg gacggctcga atgacgcggg ggttttgccg ccggtgatgt cgttgcgcaa
     3721 ctcgtccagc gtaaagccga ccgccagttt cgccgccacc ttcgcaatcg ggaagcccgt
     3781 cgctttggaa gccagcgcgg atgaacggct cacgcgcggg ttcatctcaa tcacaatcat
     3841 ctcgccgttt tcagggttca ccgcaaactg cacgtttgag ccacccgtgt ccacgccgat
     3901 ttcgcgcaat actgccaacg aagcattacg catgatttgg tattctttgt ctgtcaatgt
     3961 ttgcgccggc gcaaccgtaa tcgagtcgcc cgtatgcacg cccatcgggt cgaagttttc
     4021 aatcgagcaa atgatgatgc agttatcgtt cttatcgcgc accacctcca tctcgtactc
     4081 tttccagccg aggacggact gctcaatcag cagctcgtgc gtgggcgacg catcgaaacc
     4141 gcgttcgcaa atcgccaaaa actcgtcttt attgtaggca atgccgccgc ccgaaccgcc
     4201 catcgtgaaa gacggacgaa tcagcgtcgg gaagccgacc tgttcttgcg ccgccaaggc
     4261 ttcgttcatc gtgtggcaga caaaagattt cgggcaagac aaaccgattt tttccatcgc
     4321 ttctttaaag cggccacggt cttccgcctt gtcaatcgcg tcttctgtcg cgccgattaa
     4381 ctcgacgttg tatttcgcca gcacgccgtt gcgcgccaaa tccagcgcac agttcagcgc
     4441 ggtctggccg cccatcgtgg gcagaatcgc atcgggccgc tctttggcga taatcttctc
     4501 caccgtctgc cacataatcg gctcgatgta ggtaacatcc gccatttcag ggtcggtcat
     4561 gatggtggcg gggttggagt ttaccaaaat gactttatag ccttcttcac gcaaagcctt
     4621 gcaggcctgt gcgcccgaat agtcaaattc gcaggcctga ccgataacga tagggccggc
     4681 gccgatgata aggatggatt ttaggtcggt acgtttgggc atggtgggtc tttcttttga
     4741 agaatttgga ttattgacga ttggtaactt ctctaattat ttctgcatct gttttttcat
     4801 cgcttggatt atctgaaaag aaaaaactgt aattactatc ggctttaaat ttttcgtata
     4861 gctctgggcg caaaattttt gctttttcac tattttccac gctcctgcga ttaggcttgc
     4921 cagccttatc tttcccattt ctacggacat catagcaata aatagtgtta ggagaattag
     4981 gttctaaacg agtagctaca atctttttat aaattatgtc taaatctttt ttagtttgtg
     5041 ttggaatgaa atctgcaaaa agattactaa aactctgaaa aatttctctg attttcgcag
     5101 caccagcctg aacattaatt ttaaaaaaat taataaaatc agtagcactt ttaaaatgaa
     5161 cttcataaaa atcagcatac gcaaatattg aattttcact attcaaatta aaaaactcta
     5221 attttgcttg tgcataatca tctggtctag gttcatcagg tttataccta gtcaaaataa
     5281 cggcgtattg cctttgatta taattaaaag gaaatgcttc aattattcta tttttgtttc
     5341 tcatatcatt aagcaaatac tttaagttat tgaaattaat aggtattgac atatttaaac
     5401 tcctgcgaat atgttgcaat aaacgtagca atcgtaggtt gggttgaaaa cccaacacaa
     5461 accgcttaat tgtctaaaat gttgggtttg ctaacctaac ttgtatatcg aaacccccgt
     5521 atcgtagcaa gccgtagccc gtatgtaggg tatgtgcggt acgtatgcac gcgttctcca
     5581 ttttccctgc aaccccaacc caccgcgtgc gtgccttgcg gcacactctc tgccgatgag
     5641 ttcaaaggtc gtctgaaaaa acgttcgcaa cgtttgttcc acctgccttg cgataaaggc
     5701 tgcctgaaac attcccgctg tcgatgtttc gggcattctt tttcagacga cctgcaacgc
     5761 ctgaatctgc tgcaacctac cccctccccc gtgggggagg gctggggaga gggcattctc
     5821 cgaatttcgg caacctttcc taacactcta accgccaaga cacaagcctt gtggcttgtt
     5881 gccctctctc taactctctc ccacgggaga gaggactggg cggttgttgg ggctaaggtt
     5941 tctgtaaact aatcaggtta tgcaggctgc tttttgtttt tcagacggcc tttataaatg
     6001 ctcaattcag tcggctttat cctattattt tcaataatcc aatcaaaatc agccatctgc
     6061 tatcgtgcag cttgcttttc caattcttgc aacacgagca ggatttctgt cagcacatcg
     6121 tttgtctgct gtaaaatctc gtgattccaa aaccgcagta cggtaaagcc caagctgttg
     6181 agatatgccg tccgcgcgtg gtcgtatgcg gcttgttctg tgtgctgccc tccgtctgct
     6241 tcgacaatca acttgggcgt tacgcacata aaatcaacaa tatagtttcc catcggctgc
     6301 tggcggcgga atttatagcc gttcagacga cctgcccgca ggtgctgcca caattttgct
     6361 tccgccccgc tcatttcttg gcgcatggct ttggcgcgtt ggcgcaagat ggggttgtcg
     6421 gtggtcaaga gtttctcgtg cgggttcatt ttgttgtcgt gctgtttgct gccctctctc
     6481 taactctctc ccacggggag agaggacggg gcggttgttg gggttaaagg ggctgtaagg
     6541 aaaacaagtc gttcaggcca ctttttactt ttcagacgac ctgcaatcaa cggttgtaaa
     6601 tccaagttgc ttttcaaacc gcctgtaacc gcaaaacttg ctgcaaccta ccccctcccc
     6661 cgtgggggag ggctggggag agggcattct tcgaatttcg gcaaccttcc ccaacaccct
     6721 aaccgcccaa acacaagcct tgctgtttgt tgccctctct ctaacgcttt cccacaggga
     6781 gacaggacgg ggcggctgta gtgattaagg gttttgcaag gaaaacaagg aaaacaagtt
     6841 gtacaggctg tttttttatt tttcaagcga cctgaaatca acgcttgtaa atccaagtcg
     6901 cttttcaaac tgcctgcaac cgcaaaatct gctgcaacct accccctccc ccgtggggga
     6961 gggctgggga gagggcattt tccaagttgc ggcaatcttt cccaaatccc ttagtcttct
     7021 aaaatacaag ccttacggtt gttgccaaat gaaacttctt ccatacccaa aacttgcgtg
     7081 taaaacgcaa tggttcggtc aatgtcggca acggtcagta ccagatggtc gagtgcgcta
     7141 atcttcattt cccgctttct ttttcaggcg gcggcagtgc cgtctgaaag ccattatgcc
     7201 cgttttgccg ctttcatatt gccaatgaat ttgtcaaaca aatagccgac atcttgcgga
     7261 ccggggctgg cttcggggtg gccttggaag cagaacacag gtttgtcggt cagctcgatg
     7321 ccttgcaaag tgttgtcaaa caaggatttg tgggtaatgc gtgcgttagc gggcagggtg
     7381 tcggcatcaa cggcaaaacc gtggttttgg ctggtgatga cgactttgcc gctgtccaaa
     7441 tcttgcacag ggtggttcgc accgtggtgg ctgaagcgca ttttcagggt tttcgcgccg
     7501 atagcgcggc tgatgagctg gtgtcccaag cagatgccga aaatcggttt gccgctttcc
     7561 atcagttttt gcacggcttc gatggcgtag gtgcaaggct cggggtcgcc ggggccgttg
     7621 gacaggaaca cgccgtcggg attgagtgcc aacacgtctt gtgcgctcgt ttgggcgggg
     7681 acgacggtca ggcggcagcc gcgcgaggcg agcatacgca ggatgttggt tttcacgccg
     7741 aaatcgtagg cgacgacgtg gtaaggctgt tcgtcagggg taacgaaacc cttgcccaat
     7801 tcccattcgc cttccgtcca ttcgtaagtt tccgtgcagg aaacttcttt tgccaagtct
     7861 ttgccgacca tactgccgaa cgcggcgatg agttcttgcg ctttttcgat tgtggcatcc
     7921 gcaccggtca gaatcgcgcc gccttgcgcg cctttttcgc gcaacagcgt ggtcaggcgg
     7981 cgggtatcga tgtcggcgat ggcgacggtt ttgttgcgta ccagatagtc gtgcaggctt
     8041 tcggaggcgc ggaagttgct gtgcaagagc ggcaggtcgc ggataatcag gccggcggca
     8101 taaacgctgc ggctttcttc atcttcggcg ttggtgccgg tgttgccgat gtgtgggtag
     8161 gtgagggtaa cgatttgttt gcagtaggac gggtcggtca ggatttcctg atagccggtc
     8221 atcgaagtat tgaacacgac ttcgccggaa gtcgaacctt cgtaaccgat tgatgtgccg
     8281 tggaatacgc tgccgtcagc gaggacgagg agggcggggg tgctcatgat gggaatcctg
     8341 tttttaataa aattcttgac aatgccgtct gaagggactt cggcaggggg catccggtcg
     8401 gaaaaatccg gtcaaaaaaa aaacacgccg cgcaagatag acacgtaacg tgcttttcgg
     8461 gcaagtgcct ataccctgaa agcagcatat tttaagacga aacatacccg atttcaagcg
     8521 caaacgcggc aggcgggctg atatgttcgc gcgaaaacgg aaatccgtgg cgtaaaaccg
     8581 cccgctctgc gcccactatg cccgttacgc atttccccac gtccgtccgg cgaaactatg
     8641 ggaatacc
//
LOCUS       DAWITQ010000079         8562 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.079, whole genome shotgun sequence.
ACCESSION   DAWITQ010000079 DAWITQ010000000
VERSION     DAWITQ010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8562)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8562)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8562
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.079"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(77..595)
                     /locus_tag="WIX18_001343"
     CDS             complement(77..595)
                     /locus_tag="WIX18_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HEZ5238443.1"
                     /translation="MTTHFVVMGVCGCGKTTAALSLQKHLGQCPYAEGDEFHTQANRD
                     KMGAGIPLTDEDRYPWLGNLRDWMTKQAQNGANHTIVTCSALKRGYRDILRGAEGKAA
                     FIHLSPPQDINLERMMSRKGHYMKAGMLDSQLEILEELGEGEYGVKIANPGTPEAVEA
                     DILNWVASENLL"
     gene            complement(615..2000)
                     /locus_tag="WIX18_001344"
     CDS             complement(615..2000)
                     /locus_tag="WIX18_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HEZ5238444.1"
                     /translation="MDGWTQTLSAQTLLGISAAAIILILILIVKFRIHALLTLVIVSL
                     LTALATGLPTGSIVNDVLVKNFGGTLGGVALLVGLGAMLGRLVETSGGAQSLADALIR
                     MFGEKRAPFALGVASLIFGFPIFFDAGLIVMLPIVFATARRMKQDVLPFALASIGAFS
                     VMHVFLPPHPGPIAASEFYGANIGQVLILGLPTAFITWYFSGYMLGKVLGRTIHVPVP
                     ELLSGGTQDNDLPKEPAKAGTVVAIMLIPMLLIFLNTGVSALISEKLVSADETWVQTA
                     KTIGSTPIALLISVLVALFVLGRKRSESGSALEKTVDGALAPVCSVILITGAGGMFGG
                     VLRASGIGKALADSMADLGIPVLLGCFLVALALRIAQGSATVALTTAAALMAPAVAAA
                     GFTDWQLACIVLATAAGSVGCSHFNDSGFWLVGRLLDMDVPTTLKTWTVNQTLIALIG
                     FALSALLFAIV"
     gene            2239..3780
                     /locus_tag="WIX18_001345"
     CDS             2239..3780
                     /locus_tag="WIX18_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEZ5238445.1"
                     /translation="MDGRRWAVWGAFALLPSAFLAVMVVAPLWAVAAYDGLAWRAVLS
                     DAYMLKRLAWTVFQAAATCVLVLPLGVPVAWVLARLAFPGRALVLRLLMLPFVMPTLV
                     AGVGVLALFGADGLLWRGRQDTPYLLLYGNVFFNLPVLVRAAYQGFVQVPAARLQTAR
                     TLGAGAWRRFWDIEMPVLRPWLAGGVCLVFLYCFSGFGLALLLGGSRYATVEVEIYQL
                     VMFELDMAVASVLVWLVLGVTAAAGLLYAWFGRRAVSDKAVSPVMPSPPQSVGEYVLL
                     AFAAEVLSVCCLFPLLAIVVKAWSAGESWRVLMESETWQAVWNTLRFSAAAVFAAAVL
                     GVVYAAAARRSAWMRGLMFLPFMVSPVCVSAGVLLLYPQWTASLPLLLAMYALLAYPF
                     VAKDVLSAWDALPPDYGRAAAGLGANGFQTACRITFPLLKPALRRGLTLAAATCVGEF
                     AATLFLSRPEWQTLTTLIYAYLGRAGEDNYARAMVLTLLLSAFALGIFLLLDNGEGGK
                     QTETL"
     gene            3809..4408
                     /locus_tag="WIX18_001346"
     CDS             3809..4408
                     /locus_tag="WIX18_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEZ5238446.1"
                     /translation="MSELDNILAHNRQFVESGEYEKYFTDKYPERGLAVLSCMDARII
                     GLLPDALGLKNGDAKLIKNAGALVTHPWGSVMRSLLVAVFELKVREIMVIAHHDCGMQ
                     GLNAEEFLGRVRESQIPEDRIETLRYAGIDLDGWLTGFDNVEDSVRHTVDLIRNHPLM
                     PRHIAVHGLVIHPVTGKLTLVVDGSVSDGMDLSEGMETS"
     gene            4405..5010
                     /gene="nadD"
                     /locus_tag="WIX18_001347"
     CDS             4405..5010
                     /gene="nadD"
                     /locus_tag="WIX18_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HEZ5238447.1"
                     /translation="MKKIGLFGGTFDPIHNGHLHIARAFADEIGLDAVVFLPTGGPYH
                     KDAASASAADRLAMVELATAEDARFAVSDCDIVRRGETYTFDTVQIFRQQFPSAQLWW
                     LMGSDSLMKLHTWKKWQMLVRETNIAVAMRQGDSLHQTPRELHAWLGNALQDGSVRIL
                     SAPMHNVSSTEIRRNLAGQGVSDGIPPAAARYIREHGLYEK"
     gene            5069..5455
                     /gene="rsfS"
                     /locus_tag="WIX18_001348"
     CDS             5069..5455
                     /gene="rsfS"
                     /locus_tag="WIX18_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEZ5238448.1"
                     /translation="MNEQELQDLQKMVGVAVNALEDIKAKDISVLETQDKTSLFARMI
                     IASGDSTRQVKALANNVAVDLKEAGFEILSTEGDSGEWTLVDAGDLVVHVMLPAVRDF
                     YDIDTLWGGEKPSFHAGMQKPWHAAD"
     gene            5509..5979
                     /gene="rlmH"
                     /locus_tag="WIX18_001349"
     CDS             5509..5979
                     /gene="rlmH"
                     /locus_tag="WIX18_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEZ5238449.1"
                     /translation="MNITVLAVGTKMPRWVDEAVAEYAKRFGRDVAYALKEIKPEKRG
                     AGVNAAQGMAAEEKRILEAVPQGAFLVVLDERGKAPTSVELAEHLKSWRQNGEHVCFV
                     IGGADGMTDRLKQQARMMMRLSSLTLPHGMVRVLLTEQLYRAVSILHNHPYHRE"
     gene            6052..6318
                     /locus_tag="WIX18_001350"
     CDS             6052..6318
                     /locus_tag="WIX18_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HEZ5238450.1"
                     /translation="MARMVFCVKLNKEAEGMKFPPLPNELGKRIFENVSQEAWAAWTR
                     HQTMLINENRLSLADPRAREYLAQQMEQYFFGDGADAVQGYVPQ"
     gene            6475..7158
                     /locus_tag="WIX18_001351"
     CDS             6475..7158
                     /locus_tag="WIX18_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1 family protein"
                     /protein_id="HEZ5238451.1"
                     /translation="MQHDVYDYTAHTVSKNTVLQKTYRLLGFSFIPAAAGAALAANAG
                     FNFYAAFGSRWIGFAVVLAFFYGMIHFIEKNRYSNTGVTLLMVFTFGMGVLIGPVLQY
                     ALHIADGAKIVGIAAAMTAAVFLTMSALARRTRLDMNALGRFLTVGAVILMVAVVANL
                     FLGIPALALTISAGFVLFSSLMIMWQVRTVIDGGEDSHISAALTLFISLYNIFSSLLN
                     ILLSLNGED"
     gene            7282..7794
                     /gene="coaD"
                     /locus_tag="WIX18_001352"
     CDS             7282..7794
                     /gene="coaD"
                     /locus_tag="WIX18_001352"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HEZ5238452.1"
                     /translation="MLPNTPRRAVYAGSFDPPTLGHLWMIRQAQSMFDELIVAIGINP
                     DKRSTYTVAERQDMLCDITKMFPNVRTDVFENRFLVHYAREVDAGFIVRGIRSASDYE
                     YERSMRHINSDLAPEISTVFLMPPREIAEVSSTMVKGLVGPEGWTETIHRYVPQAVYE
                     KILAEHQHEN"
     gene            7826..8479
                     /locus_tag="WIX18_001353"
     CDS             7826..8479
                     /locus_tag="WIX18_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01621 family pseudouridine synthase"
                     /protein_id="HEZ5238453.1"
                     /translation="MLEILFRHQDFVAINKPGGISVHQDSGETGLARTLAIQLGVERV
                     WLLHRLDKQTSGILLFALNRESASALSGQFAGKSIKKTYLALSDRKPSKKQGWIKGGM
                     EKSRRGMWKLTRNTENIAVTRFHSISIAEKLRLFILEPHTGKTHQLRVAMKSLGSPIL
                     GDSLYGGTESETMFLYAWKIQFAYQNRQIEIVAPLKNEWQTENISHALEEFYMAKAG"
BASE COUNT         1851 a         2273 c         2508 g         1930 t
ORIGIN      
        1 aatgtaatcc attctgttcc cgatgtttat gccgtctgaa acccatcctg tgtcgggctt
       61 cagacggcat attgcttcaa agcaggtttt ccgaggcaac ccagttcaga atatcggctt
      121 cgaccgcttc gggcgtgccg gggttggcga ttttgacccc gtattcgcct tcgcccagtt
      181 cctcgaggat ttccagttgc gaatcgagca tccctgcttt catataatgt cctttgcgcg
      241 acatcatgcg ctcgaggttg atgtcttgcg gcggactgag gtggatgaag gcagctttgc
      301 cttcggctcc gcgcagaatg tcgcggtagc cgcgtttgag ggcggaacag gttacgatgg
      361 tgtggttcgc accgttttgc gcctgtttcg tcatccagtc gcgcagattg cccaaccacg
      421 gatagcggtc ttcatcggtc agcggaatac ccgcgcccat cttgtcgcgg ttggcttggg
      481 tgtggaactc gtcgccttcg gcatagggac attgaccgag gtgtttctgc agggacagcg
      541 cggcggtggt cttgccgcag ccgcatacgc ccataacgac aaaatgcgta gtcatttact
      601 atcctttccg tctgtcagac gatggcgaac agcagtgcgg acaaggcaaa gccgatgagt
      661 gcgatgaggg tttggttgac cgtccaggtt ttcagcgtgg tcggtacgtc catgtccaag
      721 aggcggccga ccagccagaa gccggagtcg ttgaagtggc tgcaaccgac cgaacctgcc
      781 gccgttgcca atacgataca ggcgagctgc cagtcggtaa agccggcggc ggcaacggca
      841 ggagccatca gcgcggcggc ggtggtcagg gcgacggttg ccgaaccttg cgcgatacgc
      901 agtgccaagg cgacaaggaa acagcccaaa aggacgggaa tgcccaaatc cgccatgctg
      961 tcggcgagtg ccttgccgat gccggaagcg cgcaaaacgc cgccgaacat accgcccgcg
     1021 ccggtaatca gaatcacgga acagacgggg gcgagtgcgc cgtccacggt tttttccaac
     1081 gcgctgccgc tttcgctgcg tttgcgtccc aagacaaaca gtgcgaccaa tacggaaatc
     1141 agaagggcga tcggtgtcga accgattgtt tttgccgtct gaacccaggt ttcgtccgca
     1201 cttacgagtt tttcgctgat gagggccgat acgccggtat tcaggaaaat cagcagcatg
     1261 ggaatcagca tgatggcgac gaccgttcct gctttggcag gttctttcgg caggtcgttg
     1321 tcttgcgtgc cgccgctgag cagttcggga acgggaacat ggatggtgcg ccccaacact
     1381 ttgccgagca tatagccgct gaaataccat gtgatgaagg cggtcggcag acccaaaatc
     1441 aaaacttggc cgatgttcgc gccgtaaaat tcggaagcgg caatcgggcc cggatggggc
     1501 ggcaggaaga cgtgcatgac ggaaaatgcg ccgatggagg caagcgcgaa gggcagtacg
     1561 tcctgtttca tgcgccgtgc ggtggcgaac acgatgggca gcatgacgat tagtccggca
     1621 tcgaagaaaa tcgggaagcc gaaaatcagc gaggcaacgc ccagcgcgaa cggtgcgcgt
     1681 ttttcgccga acatccggat cagcgcgtcc gccagcgact gtgcgccgcc ggatgtttcg
     1741 accaaacgtc cgagcatcgc gcccaggccg accagaagcg ccacgccgcc gagcgtgccg
     1801 ccgaagtttt tgaccagtac gtcgttgaca atgctgcctg tgggcaaacc ggttgccaaa
     1861 gccgtcagca ggctgacgat gaccagtgtc agcagcgcgt ggatgcggaa tttgacgatt
     1921 aaaatcagaa tgaggatgat tgccgccgcc gaaatgccca acagggtttg cgcggacagc
     1981 gtctgtgtcc agccgtccat ttgtaaagcc tttctctgta ataaaagtac aaaattgtca
     2041 ggttttttta agttgtgcga aaacgatagc acaaatcggg cggtaagttg tttgtctgaa
     2101 gttatattcc tgtttatttg aacgatttat ttcagacggc gggaggaagg cggatacggt
     2161 atgtagtcgg attgaaatat acggtatgtg gggcttttgg gtacaatcgc aacatcagtg
     2221 tttcaagtgg ggaaggcgat ggatggacgg cgttgggcgg tatggggtgc ttttgccctg
     2281 ctgccttcgg cttttttggc ggtaatggtc gttgcgcctt tgtgggcggt ggcggcgtat
     2341 gacggtttgg cgtggcgcgc ggtgctgtcg gatgcctata tgctcaaacg tttggcgtgg
     2401 acggtatttc aggcagcggc aacctgtgtg ctggtgctgc ctttgggcgt gcctgtcgcg
     2461 tgggtgctgg cgcggctggc gtttccgggg cgggctttgg tgctgcgcct gctgatgctg
     2521 ccttttgtga tgcccacgtt ggtggcgggc gtgggcgtgc tggctctgtt tggggcggac
     2581 ggcctgttgt ggcgcggacg gcaggatacg ccgtatctgt tgttgtacgg caatgtgttt
     2641 ttcaaccttc ctgtgttggt cagggcggcg tatcaggggt ttgtgcaagt gcctgcggca
     2701 cggcttcaga cggcacggac gttgggcgcg ggggcgtggc ggcggttttg ggacattgaa
     2761 atgcccgttt tgcgcccgtg gcttgccggc ggcgtgtgcc ttgtctttct gtattgtttt
     2821 tccgggttcg ggctggcgct gctgctgggc ggcagccgtt atgccacggt cgaagtggaa
     2881 atttaccagt tggtcatgtt cgaactcgat atggcggttg cttcggtgct ggtgtggctg
     2941 gtgttggggg taacggcggc ggcagggttg ctgtatgcgt ggttcggcag gcgcgcggtt
     3001 tcggataagg cggtttcccc tgtgatgccg tcgccgccgc agtcggtcgg ggaatatgtg
     3061 ctgctggcgt ttgcggcgga ggtgttgtct gtgtgctgcc tgtttccttt gttggcaatt
     3121 gttgtgaaag cgtggtcggc cggcgaatcg tggcgtgtgt taatggaaag tgaaacgtgg
     3181 caggcggtgt ggaatacttt gcgcttctcg gcggcggcgg tgtttgcggc ggcggttttg
     3241 ggtgtggtgt atgcggcggc ggcgcggcgg tcggcgtgga tgcgcgggct gatgtttttg
     3301 ccgtttatgg tgtcgccggt ttgtgtttcg gcgggcgtgc tgctgcttta tccgcagtgg
     3361 acggcttcgt tgccgttgct gctggcgatg tatgcgctgc tggcgtatcc gtttgtggca
     3421 aaagatgttt tgtcggcttg ggacgcactg ccgccggatt acggcagggc ggcggcgggt
     3481 ttgggcgcaa acggctttca gacggcatgc cgcatcacgt tccccctctt gaaaccggcg
     3541 ttgcggcgcg gtctgacttt ggcggcggca acctgcgtgg gcgaatttgc ggcaaccttg
     3601 ttcctgtcgc gtcccgagtg gcagacgctg acgactttga tttatgccta tttggggcgt
     3661 gcgggtgagg ataattatgc gcgggcaatg gtgttgacat tgctgttgtc ggcgttcgcg
     3721 ctgggcattt tcctgctgtt ggacaacggc gaaggcggaa aacagacgga aacgttataa
     3781 tgtgaaccct ttttcagagg acggcaaaat gagcgagttg gataacatcc ttgcccataa
     3841 ccggcagttt gtcgagtcgg gcgaatatga aaaatacttt accgacaaat accccgaacg
     3901 cgggctggca gttttgtcct gtatggatgc gcggattatc gggctgctgc ccgacgcgtt
     3961 gggtttgaaa aacggcgatg ccaagctgat taaaaatgcc ggcgcgctgg ttacgcaccc
     4021 gtggggttcg gtgatgcgga gtcttttggt tgccgtgttt gaattgaagg tcagagagat
     4081 tatggtcatc gcccatcacg attgcggtat gcaggggctg aatgccgaag aattcctcgg
     4141 gcgcgtccgg gaaagccaga ttcccgaaga ccgtatcgaa accctgcgtt atgccggtat
     4201 cgacctcgac ggctggctga ccggtttcga caacgtcgaa gacagtgtgc gccacacggt
     4261 ggaccttatc cgtaaccatc cgctgatgcc gcgccatatc gccgttcacg gactggtcat
     4321 ccatcccgtt accggcaaac tgacgctggt tgtggacggc agtgtttcag acggcatgga
     4381 cttatcggaa ggaatggaaa catcatgaag aaaatcggac tgttcggcgg cactttcgac
     4441 ccgatacaca acgggcatct ccacatcgcc cgcgcctttg ccgacgaaat cggcttggac
     4501 gcggttgttt tcctgccgac aggcggcccg tatcacaaag acgccgcctc cgcttccgcc
     4561 gccgaccgcc ttgccatggt cgaattggcg acggcagaag atgcgcgttt tgccgtcagc
     4621 gactgcgaca tcgtccgccg gggcgagact tacactttcg acaccgtcca aattttccgc
     4681 cagcagttcc cctcggcgca actctggtgg ctgatgggca gcgacagcct gatgaagctg
     4741 cacacatgga aaaaatggca gatgctcgtg cgcgaaacca atatcgccgt cgccatgcgg
     4801 cagggcgaca gcctgcacca aaccccgcgc gaactgcacg cgtggctggg caatgcgctt
     4861 caggacggca gcgtccgcat cttgtccgcc ccgatgcata atgtgtcgtc aacggaaatc
     4921 cgccgcaacc ttgccggcca aggcgtttca gacggcatcc cgcctgccgc cgcacgctac
     4981 atccgcgaac acggtttgta tgaaaaataa agtcaaatca gtaagaaacg gctataatgc
     5041 cgtctgaaaa catcccgtta ggaacataat gaacgaacaa gaactgcaag acctgcaaaa
     5101 aatggtcggg gtcgccgtca acgccctcga agacatcaaa gccaaagaca tttccgttct
     5161 cgaaacgcaa gataaaactt cgctgtttgc cagaatgatt atcgccagcg gcgacagtac
     5221 gcgccaagtc aaagcactgg ccaacaacgt tgccgtcgat ttgaaagaag ccggttttga
     5281 aatcctcagt accgaaggcg acagcggcga atggacgttg gttgatgcag gagacctcgt
     5341 tgtccacgtt atgctccctg ccgtgcgcga cttctacgac atcgacaccc tttggggcgg
     5401 cgagaaaccg agtttccacg ccggaatgca gaagccgtgg cacgcggcag actgattccc
     5461 gatgccgtct gaatgttcag acggcatttt cctgtaaggg agaaagcatt gaacattacc
     5521 gttttggcag tcggcaccaa aatgccgcgc tgggttgatg aggccgtcgc cgaatacgcc
     5581 aaacgcttcg gacgcgacgt cgcctacgca ctcaaagaaa tcaaacccga aaaacgcggc
     5641 gcgggcgtga atgccgccca aggtatggcg gcggaagaaa aacgcatcct tgaagccgtt
     5701 ccgcaaggcg cgttccttgt cgttcttgac gaacgcggca aagcgccgac ctccgtcgag
     5761 ctggcggaac acctcaaaag ctggcggcaa aacggcgaac acgtctgctt cgtcatcggc
     5821 ggcgcggacg gcatgaccga ccgcctcaaa caacaagccc gcatgatgat gcgcctgtcc
     5881 agcctcaccc tgccgcacgg catggtgcgc gtccttctga ccgagcagct ctaccgggcc
     5941 gtttccatcc tgcacaacca tccttatcat cgggaataag aaggcttttg tccgcccccc
     6001 taatcggtta aaatcacccc gttatttctg aacacagcaa aggaatccgc tatggcacgc
     6061 atggtattct gcgtcaagct caacaaagaa gccgaaggca tgaaatttcc gccgcttccc
     6121 aacgaattgg gcaagcgcat ttttgaaaac gtatcgcaag aagcgtgggc ggcgtggacg
     6181 cgccaccaaa ccatgctgat taacgaaaac cgcttaagcc ttgccgatcc gcgcgcgcgc
     6241 gaatacctgg ctcagcagat ggagcagtat ttcttcggcg acggcgcgga tgccgttcag
     6301 ggatacgttc cgcaataacg gttttccgtt ttgaacacag gctgtccgaa actgcttcag
     6361 acggccttta aaatacgctg gacaacttta tcttcacgca accggacaaa ttttgacatt
     6421 gggcaatgtt aaaatccccc attattccca accgcgcttt caggagcaga tgatatgcaa
     6481 cacgacgttt acgactacac cgcgcatacg gtttctaaaa acaccgtcct gcagaaaacc
     6541 taccgcctgc tcggattttc attcattccg gcagccgcag gcgcggcact tgccgccaat
     6601 gccggtttca atttttacgc cgccttcggt tcgcgctgga tagggtttgc cgtcgtgttg
     6661 gcgtttttct acggtatgat ccacttcatc gagaaaaacc gttacagcaa taccggcgtt
     6721 accctgctga tggtattcac attcggtatg ggcgtattga tcggccccgt gctgcaatac
     6781 gcgctccata ttgccgacgg tgcgaaaatc gtcggcattg ccgccgcgat gaccgccgcc
     6841 gtctttttaa cgatgtccgc cttggcgcgc cgaacccggc tcgatatgaa cgcgctcgga
     6901 cgcttcctga ccgtaggtgc ggtcattctg atggtcgccg tggttgccaa tctgtttttg
     6961 ggtattcccg cactcgccct gaccatttcc gccggttttg tcttgttcag ttccttaatg
     7021 attatgtggc aggtacgcac cgtcatcgac ggcggcgaag acagccacat cagcgcggca
     7081 ctgacactgt ttatctcgct ttacaacatc ttcagcagcc tgctgaacat cctgttgtct
     7141 ttaaacggcg aggattgatg ccggcaaaac gccgtccgac tatgccgtct gaaaatgctt
     7201 cagacggcat tttactttgg gcatacaata cggatgcaca cgcaccaaca cacagccgac
     7261 tatgaagccg ggaggaatca aatgttaccg aatacaccgc gccgcgccgt ttatgccggc
     7321 agtttcgatc cgcccacatt ggggcatctg tggatgatac ggcaggcgca atctatgttt
     7381 gacgaactca tcgtcgccat cggcattaac cccgacaaac gcagcaccta taccgtcgct
     7441 gaaaggcagg atatgttgtg cgatattact aaaatgtttc ccaacgtcag aaccgatgta
     7501 tttgaaaacc gatttctggt gcattacgcc cgtgaggtag atgcaggatt catcgtgcgc
     7561 ggcatccgtt ctgcttcgga ttacgaatac gaacgttcca tgcgccatat caacagcgac
     7621 ctcgcccccg aaatatccac cgtattcctc atgccgccgc gcgaaatcgc cgaagtgtcg
     7681 tccactatgg tcaaaggact ggtcgggccg gaaggctgga cggaaacgat ccaccgctac
     7741 gtgccgcaag ctgtgtacga aaaaatcctt gccgaacatc aacacgaaaa ttgaaccctt
     7801 ctatttttgc aaggcatata tggatatgtt ggaaattttg ttccgccatc aagacttcgt
     7861 cgccatcaac aaaccgggcg gcatatccgt ccaccaagac agcggcgaga ccggactggc
     7921 ccgaacactc gccatacagt tgggcgtaga gcgtgtgtgg ctgctgcacc gattggacaa
     7981 acagaccagc ggcattttac tgtttgccct caacagagaa agcgcgtccg cccttagcgg
     8041 acagtttgcc ggcaaaagca tcaaaaaaac ctatttggca ctatccgacc gcaaaccgtc
     8101 caaaaagcag ggttggatta aaggcggaat ggaaaaatcc agacgcggaa tgtggaagtt
     8161 gacgcgcaat acagaaaata tcgccgttac ccgattccac agcatcagta tcgccgaaaa
     8221 actgcggctg ttcatcctgg aaccgcatac gggcaaaacg caccaattga gagtggcgat
     8281 gaaaagtttg ggcagtccga ttctgggcga cagcttatac ggcggaacag aatccgaaac
     8341 catgtttctg tatgcatgga aaatacaatt tgcctaccaa aaccgacaaa tcgaaattgt
     8401 tgcaccctta aaaaacgaat ggcagactga aaatatctct catgcgctgg aagaatttta
     8461 tatggcaaaa gcaggttaat aaatataaat taatttataa acaatatgat aaatattttt
     8521 ataaaaattt ttcaagaaaa cggttgactg caaatctctt ca
//
LOCUS       DAWITQ010000080         8559 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.080, whole genome shotgun sequence.
ACCESSION   DAWITQ010000080 DAWITQ010000000
VERSION     DAWITQ010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8559)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8559)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8559
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.080"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(100..312)
                     /locus_tag="WIX18_001354"
     CDS             complement(100..312)
                     /locus_tag="WIX18_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ5238454.1"
                     /translation="MELGYTPYNLRTLRNRCKLTQAELAQIVGVKHYIQVGRWEAEPD
                     TETRRADMPLEKWRQFLDWTEKTNAV"
     gene            complement(324..605)
                     /locus_tag="WIX18_001355"
     CDS             complement(324..605)
                     /locus_tag="WIX18_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238455.1"
                     /translation="MNRAALFNRYPEWIIGQDGASRFITHCRYPRLIAKIHRQTDSEC
                     PGGHYRHSENGITLYDFIFFDGKPADEARFAAVLTETCRRAVKKICETK"
     gene            complement(652..915)
                     /locus_tag="WIX18_001356"
     CDS             complement(652..915)
                     /locus_tag="WIX18_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238456.1"
                     /translation="MADILPSDKRRQPPKTKGSTMNIIEQEMKHSSLRKVDAEIAKII
                     ADAHKINAESVKIAQESRWYPMMAATGLVTAIAAVLALIFKFA"
     gene            complement(935..1507)
                     /locus_tag="WIX18_001357"
     CDS             complement(935..1507)
                     /locus_tag="WIX18_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEZ5238457.1"
                     /translation="MGKPGKSSRPSALLSARWQDIDLTARLWHIPAADMKTKHPFTVP
                     LSDWAVEILRELHTQTGDNIHLFPGIRPRRKPAPHPDHISIKFAHNAIRRLGYDGSTP
                     GKSKHTMHGFRHLFTNISLTAGKDTLTTDLALGHISRAALQRAGFSSLHHYLTADSYR
                     LQERRELAEWYSRRHRQAYEAAAQNTCNKT"
     gene            1486..1797
                     /locus_tag="WIX18_001358"
     CDS             1486..1797
                     /locus_tag="WIX18_001358"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238458.1"
                     /translation="MTSPVSPSIRAASIFPLARSISTACRTDINRLPLRLIASTKTAE
                     INLASSGLSSVLPASLRRLRVGLTLTASSLRYSVARLMPNSCACCLRYAERAPRSIAS
                     A"
     gene            complement(1819..2694)
                     /locus_tag="WIX18_001359"
     CDS             complement(1819..2694)
                     /locus_tag="WIX18_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3102 domain-containing protein"
                     /protein_id="HEZ5238459.1"
                     /translation="MSNEVEVMDAVSVQNYQVAHSVMVMEQWGNGEVYNEATWIERGR
                     LAVRQTMEGMFELGRALIVLKEHTEHGRFMEIVKGQFGIGHNETARLMSATQRFATPQ
                     MQKAAPKLMDLGKSKLLELLVEEDVTLVGLAEGEEVNGMTFDDVDRMTVRELRVALRE
                     SRENLAAKDEVMKTKTAKIDELAEKLAKKQTVVREPKAEDVGSELAMQLTSLEVGIRS
                     QVSRLKDLFDQLNAHSEAHGISHQAKMVGTLNQIILDCEQLRESYALPTEAPTDNVPE
                     WLGGETGEGDESGND"
     gene            complement(2740..3030)
                     /locus_tag="WIX18_001360"
     CDS             complement(2740..3030)
                     /locus_tag="WIX18_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HEZ5238460.1"
                     /translation="MAESKRVQRLLRVFIALDEHPIIGLSNKDLSVGLGLTPSQVSRD
                     IDDLVASGLVIKLENGNYAYGIKTLQIAERFRRQHERLQSKIAEIGKRVNAD"
     gene            complement(3042..3287)
                     /locus_tag="WIX18_001361"
     CDS             complement(3042..3287)
                     /locus_tag="WIX18_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HEZ5238461.1"
                     /translation="MINHECINQPYGRILKFSRVQAKEMLTADELKENFAQNGQTLAQ
                     WARENGFKPRDVYLVIGGQRKGNYGKGYEIAKKLGLK"
     gene            complement(3280..3504)
                     /locus_tag="WIX18_001362"
     CDS             complement(3280..3504)
                     /locus_tag="WIX18_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HEZ5238462.1"
                     /translation="MEKPLNFKPIPYPQTRESAAGWFKRNGVCKAHWAKYFNLERTTV
                     EHLLRGKLKGNFGKSHEAAVLLGMKEKSDD"
     gene            3776..4147
                     /locus_tag="WIX18_001363"
     CDS             3776..4147
                     /locus_tag="WIX18_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ5238463.1"
                     /translation="MNNSSFFGNRLKEERKKLKMTQAEIAEKCGVSGRMWGDYERGIS
                     QPKAELFFQFEKVGIDVQYVMHGRRGETAVMPSETLNAEEQELLALFREAAAADREMI
                     LMVARRAEKKAQTALGKVSNG"
     gene            4149..4772
                     /locus_tag="WIX18_001364"
     CDS             4149..4772
                     /locus_tag="WIX18_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238464.1"
                     /translation="MNQFELCQKEHVNPFALSKQYLLVVTFVKSSSKNFQAALLWARS
                     AKLFENLEIGKETIYCCAFDKTAEQAGMAGVFLNYIENWNGKQIYINGRIHSGSIYDL
                     LGVLDCYQKSQSCPNPKSHCCFVSDDIFLWHGSRPTFEISLDLTGKKKETSSAKKFVM
                     PCINFRHHRIEKETYLGNWNEQIAALAVKQNIDWCPSFDIENFRQYE"
     gene            4765..4959
                     /locus_tag="WIX18_001365"
     CDS             4765..4959
                     /locus_tag="WIX18_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ5238465.1"
                     /translation="MNNYYLYRNCSSDVLWVKRIQRQIDGSLLLISDNSTYPPMPLAL
                     AEHPDIQIIGQVVQVSKDLN"
     gene            4983..5543
                     /locus_tag="WIX18_001366"
     CDS             4983..5543
                     /locus_tag="WIX18_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238466.1"
                     /translation="MKILALLIAATCALSACGGQAEEQPASAQPQEQAQSELKTMPVS
                     YTDYQSVANKGLADQKTGLTLPEHVVPADNAEGKNLLHDFSDGLTLTVDTDKADKITA
                     VRVVWNTDAMPQKAEKLSKAAAALIAATAPGDRTLLRDTGDQIKMAIDSHNAQKEPTR
                     EWARGGIAYKVTVTNLPSVVLTAKAE"
     gene            5684..6742
                     /locus_tag="WIX18_001367"
     CDS             5684..6742
                     /locus_tag="WIX18_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238467.1"
                     /translation="MKNKLTLRYFKITRCGYWSGSSKEPNHYEDLLKTLTHLETYVKG
                     KTIEETGISRDDKEPSTFLLDICKKNGLWLLAFWNPAAESSSDEIVSLNMKSKLGQVD
                     SSPVTAGNGKTFGFVSYFLIWPEHNFYSTILSPNATLAGRTEFEEYMLNFLWIDPNFI
                     EKTTYEETSTDGIIHTMERTNFKLPLKINGTPVPRFAGKLAKSPSEKEYVISNYDQVT
                     QVHNQCTVKVTSGQSSSGILKKMLPSFFGSTELFAPLKTIRVNHSVSAAFENKSNLKD
                     WIEDWEKNSFDLDKDDCGFKLKNDDKIYWIRGNVIKCELDVNLHKENGIYPAAKILDI
                     IDQRKDYVLNEFKLSDDS"
     gene            6732..7238
                     /locus_tag="WIX18_001368"
     CDS             6732..7238
                     /locus_tag="WIX18_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238468.1"
                     /translation="MILRNIFLICSAFMIGVAWYLGANIRFEEQWVLYEALRTTASII
                     FAVVGVWLAIVYPERLKSPFSQTFSSPVYRRGFKQLFSPVISSIFILSIVLLVGLLAP
                     LLKHIEAIIQYIPLCRKISFSLLASLTMWQIYTVLSVLVPLLNILSKNENDCHASNII
                     NKLKGEQN"
     gene            7342..7845
                     /locus_tag="WIX18_001369"
     CDS             7342..7845
                     /locus_tag="WIX18_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HEZ5238469.1"
                     /translation="MSTKFNQFINRVLSHEGGYVSHPKDPGGETNWGITKRTAQANGY
                     NGSMRAMTREQAIGIYRKAFWERYRADQMPEAVAFQFFDACVNHGYGNAVRMLQRAAG
                     VADDGIIGEISLKAINSLPENDLLLRFNAERLVFYTKLSTFTSFGKGWVRRVAQNLIH
                     ASADNTD"
     gene            7957..8289
                     /locus_tag="WIX18_001370"
                     /pseudo
     CDS             7957..8289
                     /locus_tag="WIX18_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229389.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            8286..>8559
                     /locus_tag="WIX18_001371"
     CDS             8286..>8559
                     /locus_tag="WIX18_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein tyrosine phosphatase"
                     /protein_id="HEZ5238470.1"
                     /translation="MIEFVRAKKRLLWAFVLLLVWTCGYRYAADKAEAKQTALIATYR
                     HSSMVAAEQYALQLKKAQDERQRWYDFSQKQGRKPVKKQYPPQTKKA"
BASE COUNT         2128 a         1989 c         2078 g         2364 t
ORIGIN      
        1 gtgagtttat tttggggcgg cggcaggtcg ggggcaagcg gtgtggggct tggttgtggt
       61 ttttaggttt ttgggggtaa aaaatgccgt ctgaactttt cagacggcgt ttgttttttc
      121 tgtccaatcg aggaactgcc gccatttttc cagcggcata tcggcccgcc gcgtttcggt
      181 atcgggttcg gcttcccagc ggcctacctg tatgtagtgc ttcaccccga cgatttgcgc
      241 caactcggcc tgtgtcagtt tgcagcggtt gcgcagggtg cgaaggttgt aaggcgtgta
      301 gccgagttcc atgtcgttgc ggtttatttt gtttcgcata tttttttgac tgcccggcgg
      361 caggtttcgg taaggacggc ggcaaatcgg gcttcgtctg ccggttttcc gtcgaaaaaa
      421 ataaaatcgt aaagggtgat gccgttttcg gaatggcggt aatgcccgcc cgggcattcg
      481 ctgtctgtct gcctgtggat tttggcaatc aggcggggat agcggcaatg ggtaatgaaa
      541 cggcttgcgc cgtcttgccc gataatccat tcggggtagc ggttgaatag tgcggctctg
      601 ttcattttgt tcgggttgtt cgggggataa agcccctcgc ggggcttgtg gtcaggcaaa
      661 tttgaatatc agtgccaaca cggcggcgat ggcggtaacc agcccggtgg ccgccatcat
      721 gggataccat cgggattctt gggctatttt tacggattcg gcgttgattt tgtgcgcgtc
      781 tgcaatgatt ttggcgattt cggcatctac ttttctcaga ctggagtgtt tcatttcttg
      841 ttcgattatg ttcatcgtac ttcctttcgt ttttggcggt tgccgccgct tgtcggatgg
      901 taggatgtct gccatgtgta tatattgata ccttttaggt tttattgcaa gtgttttggg
      961 cggcggcttc gtatgcttgg cggtggcggc ggctgtacca ttcggcgagt tcgcgccgct
     1021 cttggaggcg gtagctgtcg gcggtcaggt agtggtgcag gcttgagaag ccggcgcgtt
     1081 ggagggcggc gcggctgatg tggccgaggg cgaggtctgt tgtgagggtg tcttttccgg
     1141 cggtcaggct gatgttggtg aagaggtggc ggaatccgtg cattgtgtgt ttggatttgc
     1201 cgggggtgct gccgtcatag cccagtcgtc ggatggcgtt gtgggcgaat ttgatgctga
     1261 tgtggtcggg atggggggcg ggtttgcgcc gtgggcggat gccggggaaa aggtggatgt
     1321 tgtcgccggt ctgtgtgtgc agctctcgga gtatttctac cgcccagtcc gacagtggga
     1381 cggtaaaggg gtgtttggtc ttcatgtcgg cggcggggat gtgccataac cgggcggtga
     1441 ggtcgatgtc ttgccagcgg gcggaaagca gtgcggaggg acgggatgac ttccccggtt
     1501 tccccatcaa tccgcgccgc ctcgattttt ccgttggcgc gcagcatttc caccgcctgc
     1561 cgcaccgaca tcaaccgctt gccgttgcgc ctcatcgcct ccaccaaaac cgccgaaatc
     1621 aatttggctt cttccggttt aagctccgtc ttgcccgcat cgctgcgccg tttgcgcgtc
     1681 ggcttgacgc tgaccgcctc cagcttgcgg tatagcgtgg caaggctgat gcccaattcc
     1741 tgcgcctgct gcttaagata tgcagagcgt gcgccgcgtt ccattgcttc cgcctgattc
     1801 tcgactgcct taagacgctc aatcattgcc ggattcatcg ccttctcccg tttcaccgcc
     1861 caaccattcc ggcacattgt ctgtcggtgc ttcagtcggc agggcatagc tttcgcgcag
     1921 ttgctcgcag tccaaaataa tttgattgag cgtgccgacc atctttgcct gatggctgat
     1981 cccgtgtgcc tcactgtgcg cattaagttg gtcgaacaaa tctttcagac ggctcacttg
     2041 actgcggata ccgacctcaa ggcttgttaa ctgcatcgcc aactcgctgc ctacgtcttc
     2101 cgccttcggc tctctgacaa cggtttgctt cttagccagc ttctcggcca gctcatcaat
     2161 tttggctgtt ttggttttca tcacttcgtc tttggcggcg aggttttcgc ggctttcgcg
     2221 cagggcgacg cgcagctcgc gcaccgtcat tcggtccaca tcgtcaaagg tcatgccgtt
     2281 gacttcttct ccttcggcaa gtcccaccaa cgtaacgtct tcttcgacca agagttccag
     2341 cagctttgac ttgcccaaat ccatcagctt cggcgcggct ttctgcattt gcggcgtggc
     2401 gaaacgttgg gtagcagaca tcaatcgggc ggtttcgtta tggccgatac caaattgacc
     2461 ttttacaatt tccataaatc gcccgtgttc tgtatgctct ttcagtacaa taagtgcgcg
     2521 ccccaattca aacatgcctt ccatcgtctg ccgtaccgcc aagcggccgc gttcgatcca
     2581 agtggcttcg ttgtaaacct cgccgttacc ccattgctcc atcaccatca cgctgtgcgc
     2641 gacttggtag ttttgcactg aaaccgcatc catcacttca acttcattgc tcatttttca
     2701 ctctccaaat ttccttacgt caggaaattt caaaattcgt taatctgcat tcacccgctt
     2761 gccgatttcg gcaatcttgc tttgcagccg ttcatgctgc cgcctgaacc gctcggcgat
     2821 ttgcagggtt ttgataccgt aggcgtagtt gccgttttca agcttgatga ccaatcccga
     2881 tgcaaccaaa tcatcaatat ccctgctgac ttgtgatggc gtcagcccca gtccgaccga
     2941 taaatcctta ttgctcagac cgataatcgg atgttcgtca agcgcgataa agaccctcaa
     3001 tagccgttgt acccttttac tttctgccat ccgcatcctc cttatttcag tcccagcttc
     3061 ttggcaattt cgtacccctt gccgtaattg cctttgcgct gtccgccgat cactagatac
     3121 acatcgcgcg gcttaaagcc gttctctctt gcccactgcg ccagcgtctg gccgttttgg
     3181 gcaaaatttt ctttcaattc gtctgccgta agcatttctt tggcctgtac gcgggaaaat
     3241 ttcagtatcc gtccgtacgg ttggttaata cactcatgat taatcatcgc ttttctcctt
     3301 catccccagc aaaaccgccg cttcgtggct tttgccaaaa ttgcctttca gcttgccgcg
     3361 caagaggtgc tccaccgtgg tgcgctctag attgaaatat ttcgcccaat gcgccttgca
     3421 caccccgttg cgcttaaacc acccggccgc gctctcgcgc gtttgcggat agggaatagg
     3481 cttgaaattc aaaggttttt ccatattatt tatgcctttc gtgtgatata atgtgtttgt
     3541 ttttaggtct ctttgcacga taaacatccg gtctgttgtg cagcagcagg gtcttggctt
     3601 gttttaaagt aaacaagctt tttctcgtag ctgggtgtat gtgatccatc atgagctgtc
     3661 gcgcatgagc tttcaaagtg ttcatttttt cgtcctttct cgtgatgatt tagggtgttt
     3721 gtgtttcgat gtggaaatta taggaagaat tcttcctatt ttgcaaggaa tatttatgaa
     3781 taactcttcc ttttttggca accgattgaa agaagaaaga aaaaaattaa aaatgactca
     3841 agctgaaatc gctgaaaaat gtggggtttc aggaagaatg tggggggatt atgaacgtgg
     3901 catcagccag ccaaaagcgg aacttttctt ccaatttgaa aaggtgggta tagacgttca
     3961 atacgtcatg cacggcagac gcggcgaaac agcggtcatg ccgtctgaaa ccctgaacgc
     4021 cgaagaacaa gaactgcttg ccctgttccg cgaggcggca gctgccgacc gtgaaatgat
     4081 tctgatggtt gcgcgcaggg cagagaaaaa agcccaaact gcgcttggta aagtgagtaa
     4141 tggataaaat gaatcaattc gaattgtgcc aaaaagaaca tgtcaatcca tttgccttgt
     4201 caaagcaata tctattggtt gtaacattcg tcaaatccag cagtaaaaat tttcaggcag
     4261 cattactttg ggcaagaagt gccaaattat ttgagaatct tgagattgga aaagaaacca
     4321 tctattgctg cgctttcgat aaaacagcag aacaggctgg gatggccggg gtatttttga
     4381 attatattga aaattggaat ggcaaacaga tttacatcaa tggccgaatc catagtggca
     4441 gtatttatga tttgttaggg gttttagact gctatcaaaa atcacagtcc tgtcccaacc
     4501 ctaaaagcca ctgttgcttt gtttcagacg acatttttct atggcatgga tcaagaccaa
     4561 cgtttgaaat cagtcttgat ctaactggaa agaaaaaaga aacatcctct gcaaagaaat
     4621 ttgtgatgcc ttgtattaat ttccgtcacc ataggattga aaaagaaacc tacttaggaa
     4681 attggaatga acaaattgcc gcattggcag taaaacaaaa tatagattgg tgtccaagtt
     4741 ttgatattga gaattttaga cagtatgaat aattactatc tatataggaa ttgcagcagc
     4801 gatgtgttat gggtcaaacg tatccaacgc caaatcgacg gcagcctact cttgatttct
     4861 gacaattcaa cctatccacc catgcccttg gcactggcgg aacaccccga tattcaaatc
     4921 atcgggcagg tagtgcaggt atcaaaagac ttgaactaga cacaatcaaa aagggaaata
     4981 gaatgaaaat actcgcttta ttaattgccg ctacctgtgc tttatctgcg tgtggcggcc
     5041 aagctgaaga acaaccggca tctgcccaac ctcaagagca ggcacaatcc gaattaaaaa
     5101 ccatgccggt aagctatacc gactatcaat cagtagccaa taaagggctt gccgaccaaa
     5161 aaactggtct gacccttcca gaacatgttg ttcctgccga caatgcggaa gggaagaatc
     5221 tgctgcatga cttttcagac ggcctcacat taaccgttga taccgataaa gccgacaaaa
     5281 ttactgctgt ccgagtagtc tggaatacag atgcaatgcc tcaaaaagcg gaaaaactgt
     5341 ccaaagctgc cgcagccttg attgcggcaa ccgccccggg agaccgcaca ctgctgcgtg
     5401 ataccggcga ccaaatcaaa atggcaattg acagccataa tgcgcaaaaa gagccaaccc
     5461 gagaatgggc gcgtggtggg attgcttata aagtcactgt tactaatttg ccgagcgtgg
     5521 ttttgacagc aaaagctgaa taacctgcat tacagccaca attaggagca gacggagatg
     5581 atgtttatag agcctgctga gaataaataa ctgataaaaa agctgtctga aaaggtttcg
     5641 gatagttagg atagctatct atttttaata tattagagag aatatgaaaa ataaactgac
     5701 tttacgttat ttcaaaataa ctcgttgcgg ttattggtct ggttcttcaa aagaacctaa
     5761 tcattatgag gacttattaa aaactttaac tcatttagag acatatgtta aaggtaaaac
     5821 tattgaagag actggaatta gtcgtgatga taaagagcca agcactttct tgctcgatat
     5881 ctgcaaaaaa aatggtctgt ggttgcttgc tttttggaat cctgccgcag aaagctcttc
     5941 agatgaaatt gtttctttaa acatgaaaag taaactaggt caagttgatt ctagcccagt
     6001 aacagcagga aatgggaaaa cttttggctt cgttagttat tttcttattt ggccagaaca
     6061 taatttttac tcaacgattc tttctcctaa tgcaacttta gctggacgaa cagagtttga
     6121 agagtacatg cttaatttct tgtggattga tcctaatttt atagaaaaga ctacctacga
     6181 agaaacttca acagacggaa taattcatac catggagcga actaatttta aattgcctct
     6241 taaaattaat ggaactcctg tgccacgttt tgcggggaaa ctagctaaat ctccttcaga
     6301 aaaagagtat gtcattagta attatgacca agtaacccaa gtgcataatc aatgcacggt
     6361 aaaggttacc tctggacaaa gttcaagtgg aattttgaag aaaatgttac caagcttttt
     6421 tggttcaaca gaattgtttg ctccattaaa aaccattcgt gtaaatcatt ctgtttctgc
     6481 tgcatttgaa aacaaatcaa atcttaagga ttggattgaa gactgggaaa aaaattcttt
     6541 tgatttagat aaagatgatt gtggctttaa gttaaaaaac gatgacaaga tttattggat
     6601 tcgaggaaat gtcatcaaat gtgaattaga cgtcaacctt cataaggaaa atgggattta
     6661 tccagctgct aaaattctag atataataga ccaaaggaaa gattacgttt taaacgaatt
     6721 caaattaagt gatgattctt agaaatattt tcctaatatg ctctgcattc atgattggtg
     6781 tagcctggta tttaggtgct aatatccgat ttgaagagca atgggtattg tatgaagcct
     6841 tgagaacaac tgcatcaatt atttttgcag ttgttggggt ttggttggct attgtctatc
     6901 ccgaacgatt aaaaagccct tttagtcaaa ctttctcctc tccggtatat cggcgtggat
     6961 tcaaacagct tttttcccct gttataagtt ccatttttat tttaagtatt gtgttacttg
     7021 ttggtttgtt ggctcctttg ctcaaacata ttgaggcaat aattcaatat atcccacttt
     7081 gtcggaaaat ctcatttagc ctgttagcaa gcttgacgat gtggcaaatt tatacggttt
     7141 tatctgtatt agtgcctttg ttaaatattt taagtaaaaa tgaaaatgac tgtcatgcat
     7201 ccaacattat taacaagcta aagggtgaac agaattagct atgtgatttt tagtgtaaac
     7261 tgcttttaac tcgtattaaa aggccactct tttaatacct cctaaaatcc ctgtacctat
     7321 caatagatac agggattttt tatgtccacc aaattcaacc aattcatcaa ccgcgttctc
     7381 tcccacgagg gcggttacgt cagccatccc aaagaccccg gcggcgaaac caattggggc
     7441 atcactaagc gcaccgccca ggcaaacggc tacaacggct ccatgcgtgc catgacgcgt
     7501 gaacaggcta tcggcattta ccgaaaggcg ttttgggagc gttaccgcgc cgaccaaatg
     7561 ccggaagcgg tcgcgttcca attttttgat gcctgcgtca accacggtta cggcaatgcc
     7621 gtccgtatgc tgcaacgcgc cgcaggcgtg gcggacgatg gaatcatcgg cgaaatcagc
     7681 ctcaaagcca tcaattccct ccccgaaaac gaccttttat tgcggttcaa cgccgagcgt
     7741 ctggtctttt ataccaagct cagtacgttc acctctttcg gcaagggctg ggtacgccgt
     7801 gtggcgcaaa acctgattca cgcgtctgca gataacactg attaaaggga gataaaccat
     7861 gtcaaaaaag tcactcatcg ccctaatgac cgcagccatg cagcccgatt tcagccacag
     7921 cgacctaggc attcgctacg ccatgccgac tcagggatgt tggacgcaag cccaccgcaa
     7981 gagcggggta gccgccgcga aacgcgcagc caaaaaaaag cgtcacaaat aaccgccttt
     8041 ttccgatggc tgggcggctt ggtctctaat ccggccacag gaaaaatcag ccataccaaa
     8101 ctatgggcaa acgtcgccgc agccgccatg acttggaagt tcgtgcaggc ggcggacgcg
     8161 cccgaatggc tctagtgggc ttatggcgca ttggtcggcg ggtatgcatt aatcaaacgc
     8221 ggcatcgcgg cgattccgca gttggcagaa atcaaaaaat ccgcaaatca ggaagggggg
     8281 cggcaatgat tgaatttgtc cgagccaaaa aacggctgct ttgggcattt gtgcttttgc
     8341 ttgtgtggac gtgcggttac cgatacgccg ccgacaaggc cgaagcgaaa caaaccgccc
     8401 tgattgccac ctatcggcat tcttctatgg ttgcggcgga acaatacgcc ttgcagctta
     8461 aaaaagcgca ggacgaaagg cagcggtggt acgacttttc ccaaaaacaa ggaagaaagc
     8521 ccgtgaaaaa acagtatccg ccgcaaacga aaaaagccg
//
LOCUS       DAWITQ010000081         8513 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.081, whole genome shotgun sequence.
ACCESSION   DAWITQ010000081 DAWITQ010000000
VERSION     DAWITQ010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8513)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8513)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8513
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.081"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(362..922)
                     /locus_tag="WIX18_001372"
     CDS             complement(362..922)
                     /locus_tag="WIX18_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase family protein"
                     /protein_id="HEZ5238471.1"
                     /translation="MNMKTLLALAVSAVCSVGVAQAHEHNTIPKGASIEVKVQQLDPV
                     NGNKDVGTVTITESNYGLVFTPDLQGLSEGLHGFHIHENPSCEPKEKEGKLTAGLGAG
                     GHWDPKGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAPRLKHLDDVRGHSIMIH
                     TGGDNHSDHPAPLGGGGPRMACGVIK"
     gene            complement(1339..2379)
                     /gene="mutY"
                     /locus_tag="WIX18_001373"
     CDS             complement(1339..2379)
                     /gene="mutY"
                     /locus_tag="WIX18_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HEZ5238472.1"
                     /translation="MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQ
                     VATVLDYYPRFLEKFPTVQTLAAAPQDEVLSLWAGLGYYSRARNLHKAAQQVVRQFGG
                     TFPSERKDLETLCGVGRSTAAAICAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKF
                     ENSLWTLAESLLPSENADMPAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQNRT
                     AELPRKKTAAEVPTLPLYWLIIRNRNGAILLEKRPAKGIWGGLYCVPCFESLNGLSDF
                     AAKFSLTMADMDEQTALTHRLTHRLLMITPFEGQMPSESPSDGIWIKPAHLKDYGLPK
                     PLEIYLNGNRLE"
     gene            2542..3583
                     /locus_tag="WIX18_001374"
                     /pseudo
     CDS             2542..3583
                     /locus_tag="WIX18_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225132.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
     gene            complement(3606..3824)
                     /locus_tag="WIX18_001375"
     CDS             complement(3606..3824)
                     /locus_tag="WIX18_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238473.1"
                     /translation="MPSEALSSLRRHFAAWRRSRHTRQHHSDILPLKCPSAFRIIKIT
                     FSSFDSSRTAHTTRLKKCRLKRIQTASA"
     gene            complement(3839..4477)
                     /locus_tag="WIX18_001376"
     CDS             complement(3839..4477)
                     /locus_tag="WIX18_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HEZ5238474.1"
                     /translation="MSKLTPREILTAGAVVPVMAIDDLSTAIDLSHALVEGGIPTLEI
                     TLRTPVGLDAIRLIAKEVPNAIVGAGTVTNPEQLKAVEDAGAVFAISPGLHESLAKAG
                     RNSGIPLIPGVATPGEIQLALEHGIDTLKLFPAEVVGGKAMLKALYGPYADVRFCPTG
                     GISLATAPDYLALPNVLCVGGSWLTPKEAVKNKDWDTITRLAKEAAALKPKA"
     gene            complement(4658..6493)
                     /gene="edd"
                     /locus_tag="WIX18_001377"
     CDS             complement(4658..6493)
                     /gene="edd"
                     /locus_tag="WIX18_001377"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HEZ5238475.1"
                     /translation="MNTTPIHSKLAEITGRIIERSRPTREKYLAKIRSAKQMGRLERN
                     QLGCSNLAHGYAAMPKSIKIEMLQETVPNLGIITAYNDMVSAHQPFKDFPDQIKDEAQ
                     KNGATAQVAGGTPAMCDGITQGYAGMELSLFSRDVIAMSTAVGLSHQMFDGSLFMGVC
                     DKIVPGLMIGALSFGHIPGIFVPAGPMSSGIGNKEKARTRQLFAEGKVGRNELLKSEM
                     GSYHSPGTCTFYGTANSNQMMMEMMGVHLPAAAFVHPYTDLREALTRYAAGHLARGIK
                     NGTIKPLGEMLTEKSFINALIGLMATGGSTNHTMHLVAMARAAGVILNWDDFDEISSI
                     IPLLIRVYPNGKADVNHFTAAGGLPFVIRELLNAGLLHDDVDTVVGHGMRHYTKEPFL
                     IDGKLEWREAPETSGNDDILRKADNPFSPDGGLRLMKGNIGRGVIKVSAVREGCRIIE
                     APAIVFNDQREVLAAFERGELERDFVCVVRYQGPRANGMPELHKLTPPLGILQDRGFK
                     VALLTDGRMSGASGKVPASIHMTPEALMGGNIAKIRTGDLIRFDSVSGELNVLINETE
                     WNAREVESIDLGANQQGCGRELFANFRSMTSSAETGAMSFGGEFA"
     gene            7009..8454
                     /gene="zwf"
                     /locus_tag="WIX18_001378"
     CDS             7009..8454
                     /gene="zwf"
                     /locus_tag="WIX18_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HEZ5238476.1"
                     /translation="MSTQTNFDLVLFGATGDLAMRKLLPCLYQAHVAGLLHPEGRILG
                     VSRSELDTEGFLAKVETSSKIHVKENFSDEAWASFVERFAYLKVDVTQPDDFAALGDL
                     VKARKETDNVVIYLSTAPKFFAQTCENLAKIGLNADNVRVVLEKPLGTDLASSQQINT
                     DVARYFKEGQIYRIDHYLGKESLQNLLALRFANVMFEPLWNNKYIESVQLTIAEQLGV
                     EERGEFYDITGALRDMVQNHLMQMLCMTAMEAPASLDADAVRDEKVKVIKSLKPLTVE
                     SVNENVVRGQYTAAKGMNGYLEEINVPQDSFTETYVAIKAEIENERWKGVPFYLRTGK
                     RMAGKVAEIVLNFKDLNSHIFEGSRTAPNRLVIELQPYESVRLYTQMKTPGAGNKVET
                     VPLATDLGKALESRRAEAYERLLLDVINGKLALFNRRDELEAAWEYVMPILENWTNNT
                     TPPHGYGAHSWGPEAARELLARDGHKWHEEQ"
BASE COUNT         1996 a         2020 c         2352 g         2145 t
ORIGIN      
        1 taagtgcgcc cgctgccgcc taaaaggcgg cccggatgcc tgattatcgg gtatccgggg
       61 aggattaagg gggtatttgg gtagaattag gagtaattag gagcgaaaat agacgaaaac
      121 ctgtgtttgg gtttcggctg tcgggaggga agggaatttt gcaaaggtct caaatagtac
      181 ggaatcgatt cacttggtgc ttcagcacct tagagaatcg ttctctttga gctaaggcga
      241 ggcaacgctg tactggttta aatttaattc actatactgc tgaagtcgtg aattaaatgc
      301 taaatatcta gcaaaaaagt gcggtcaaaa tttaccgcac ttttcgtttc gaacaatcga
      361 attatttaat cacgccacat gccatacgtg ggccgccacc gccaagtgga gctggatgat
      421 cggagtgatt atcaccaccc gtgtggatca taatagagtg accgcgaaca tcatctaaat
      481 gtttaagacg tggtgctaaa acaggatttg ttgctgtgcc atcatgcaat acagttaatg
      541 caggtaaatc acctaagtgt gcatcatctt gccatgggta accatgttgt tttgcacctt
      601 taggatccca gtgaccgcct gcgcctaaac cagctgtcaa tttaccttct ttttcttttg
      661 gctcacagct tgggttttca tggatgtgga aaccatgtaa gccttcgctt aatccttgta
      721 aatcaggggt aaacacaaga ccatagttag attcagtaat agtcactgta cccacatctt
      781 tgttaccgtt tactggatca agttgttgca ctttcacttc aatagaagca cctttaggta
      841 tcgtattatg ctcgtgtgct tgcgcaacac caactgaaca tactgcacta accgctagtg
      901 ctaataaggt tttcatattc attgcaatct cctttattgc agtaaaaact cgcgactatt
      961 ttagtcaatt ttgttttaaa agccgataaa tttttacgaa aattttacat taattgttat
     1021 ttgcagaaaa ttagaacccg ttatcacgtc ttggataaat gccaaaacca ttgtgattca
     1081 gagaattaaa aagaaaaatt tcggaatcct catccttttc tgaaacctga ttgcggtatc
     1141 catggctttg tctttgtcat ttaagtttgt gttcatgttt ttgaccttct ttgcttttta
     1201 aatccttttt aaattgccga cttctaccgt tccaaatgtc ccatttgaac attatcccgc
     1261 cgcctaaaat acgacccaaa ttcatcggtt gttcttgctg cgatacctgc aaacaacagt
     1321 tcaatgggtt tattttgttt attctaacct attaccgttt aaataaattt ccaaaggctt
     1381 gggcaaaccg taatctttca aatgcgccgg ctttatccaa atgccgtctg aagggctttc
     1441 agacggcatt tgtccttcaa acggcgtaat catcagcaac cggtgcgtca gccggtgggt
     1501 cagggcggtt tgttcgtcca tatctgccat ggtcagggag aatttggcgg caaagtcgga
     1561 aagcccgttc aaactttcaa aacacggcac gcaatacagc ccgccccaaa tgcctttggc
     1621 ggggcgtttt tccagcaaaa tcgcgccgtt ccggttgcgg ataatcagcc agtaaagcgg
     1681 cagggtcggt acttcggcgg cggttttttt gcgcggcagc tcggcggtgc ggttttgctt
     1741 tttcgcttcg cagatgtccg ccatcgggca ttggtggcac aagggtttcg tccgtttgca
     1801 cacggtcgcg cccaaatcca tcaaaccttg tgtataggca ggcatatcgg cgttttcaga
     1861 cggcagcagg ctttcggcaa gtgtccagag cgagttttca aattttttgt cctgcggatt
     1921 gccgtcgcgg gcgaacacgc ggcagagtac gcgtttgacg ttgccgtcca aaatggtttc
     1981 gcggcggttg aaggagaagg cgcaaatggc ggcggcggtg cttctgccta cgccgcagag
     2041 ggtttccaag tctttgcgct ccgacggaaa cgtgccgccg aattgcctga cgacttgttg
     2101 cgcggctttg tgcaggttgc gcgcgcggct gtaatagccc aagcccgccc acaacgacaa
     2161 cacttcgtct tgcggcgcgg cggcaagcgt ctgaacggtc gggaattttt ctaagaagcg
     2221 cggatagtag tccaacacgg tggcgacttg cgtttgctgg agcatgattt cggaaagcca
     2281 gacgcaataa gggtttttga cctgccaagg gaggtggtgg cgaccgtgtt gtttttgcca
     2341 gcggatgagc cgttcggaga aggggatggg tgtgttcatt aatatcaatc ggtggtttta
     2401 tttatattta aaacggtatg ttattgtata acattgtgaa aataattctt attgacttat
     2461 tttttgtagg ggcatataac tcatataaag aaactttatt gcggtattga aattatttat
     2521 caacaagcaa ggagtatcag catgaaagca atggtttatc acggcgcaaa cgacatccgt
     2581 tttgaagaaa aaccccgtcc gcagattatc gatccgaccg atgcggtggt gaaaatcgtc
     2641 aaaaccacga tttgcggtac cgatttgggt atttggaaag gcaaaaaaac ccgaagtcgc
     2701 cgacggtcgt attctcggtc atgaaggcat cggtattgta gaagaagtcg gcgatgctgt
     2761 aaaaaacatc aaagtcggcg ataaagtcat tatttcatgc gtcagcaaat gctgtacttg
     2821 cgacaactgc aaaatccaac tttattcgca ttgccgcaac ggcggctgga ttttgggcta
     2881 catgattgac ggcacgcagg cagaatacgt ccgcacgcct tatgccgaca acagcctcgt
     2941 gccgctgccc gacaacgtca acgaagaagt cgccctgttg ttgagcgacg ctttgccgac
     3001 cgcacacgaa atcggcgtgc aatacggcga tgtcaaaccc ggcgacaccg tattcatcgc
     3061 aggtgccgct cctgtcggta tgtccgcctt gttgaccgcc caactgtata gccccgccgc
     3121 cattatcgtg tgcgatatgg acgaaaaccg tttgaaactg gcgaaagagt tgggcgcgac
     3181 ccataccatc agccccgctt ccggcgacgt ctccaaacaa gttttcgcca tcgtcggcga
     3241 agacggcgta gattgtgcca tcgaagcggt cggtatccct gcaacttgga atatgtgcca
     3301 agacatcgtg aaacccggcg gccatatcgc cgttgtcggc gtacacggtc aatccgttga
     3361 tttcaaactg gaaaaactgt ggattaaaaa gcttgccatc actaccggcc tggtaaacgc
     3421 caataccacc gaaatgctga tgaaggcaat ttccagcagc tccgtcgatt acaccaaaat
     3481 gttgacccac cgtttcaaat tcagcgaatt ggaaaaagcc tacgacgtgt tcaaacacgc
     3541 cgccgaaaat caagcgatga aagtggtttt ggaagcggat taatcggcgt tgaatcagtt
     3601 gttttttaag cggatgccgt ctgaatgcgt ttcagacggc attttttcag ccgcgtagta
     3661 tgggctgtcc ggctgctgtc gaatgaactg aacgttattt ttattatgcg gaaggcggat
     3721 gggcatttta ggggcagtat gtcggagtgg tgctgccgtg tatgccgact gcgccgccaa
     3781 gcggcaaaat gccgtctgag actggaaagg gcttcagacg gcatttttac gatgcggttc
     3841 aggctttggg tttcaatgcc gccgcttctt tggcgagacg ggtgatggtg tcccagtctt
     3901 tgtttttcac ggcttctttc ggcgtcagcc atgagccgcc gacgcacagg acgttgggca
     3961 gtgccaagta atcgggcgcg gtggcgaggc tgatgccgcc tgtcgggcag aagcgaacat
     4021 cggcgtaagg gccgtacagg gctttgagca tggctttgcc gccaacgact tcggcaggga
     4081 agagtttgag ggtgtcgatg ccgtgttcca aagccagttg gatttcgccc ggggtggcaa
     4141 caccgggaat cagggggatg ccgctgttgc ggccggcttt ggcgagggat tcatgcagcc
     4201 ccgggctgat ggcgaaaacc gcgcctgcgt cttcgacggc tttaagctgt tcgggattgg
     4261 ttaccgtacc tgcgccgacg atggcgttgg gcacttcttt ggcaatcagg cggatggcat
     4321 cgaggccgac aggggtgcgc agggtgattt cgagggtagg gatgccgcct tcgacaaggg
     4381 cgtgggacaa atcgatggcg gtgcttaagt cgtcaatcgc cattaccggc acaactgcgc
     4441 cggcggtcaa aatttcgcgg ggggtcagtt tggacatttc ggttctccgg gtggaatggg
     4501 gtattttatt aagatgggac aggtcgtagg tcggattcaa gaaaccgaca tcttggacgg
     4561 ctgtgtcgga ttcgagaatc caacctacgt ctatcttaaa acacttgaat aatttttcag
     4621 acggccttcg gtctgaaaag gccgtctgaa acgcgcatca ggcaaattcg ccgccgaagc
     4681 tcatcgcgcc ggtttcggcg ctgctggtca tgctgcggaa gttggcgaaa agttcgcggc
     4741 cgcagccttg ttggttcgcg cccaagtcga tgctttcgac ttcgcgggca ttccattcgg
     4801 tttcgttaat caggacgttg agttcgccgc taacggagtc gaagcggatc aggtcgccgg
     4861 tacggatttt ggcgatgttg ccgcccatca gggcttcggg cgtcatgtgg atggaggccg
     4921 gaactttgcc ggatgcgccg gacatacgac cgtcggtcag cagtgccact ttgaagccgc
     4981 ggtcttgcag gatgcccaaa ggcggggtca gtttgtgcaa ttcgggcata ccgttggcac
     5041 gcgggccttg gtagcggacg acgcacacaa aatcgcgttc caactcgccg cgttcaaacg
     5101 cagccaacac ttcgcgttgg tcgttgaaca cgatggcagg cgcttcaata atgcggcagc
     5161 cttcgcgcac ggcggacact ttaatcacgc cacgtccgat gttgcctttc atcaggcgca
     5221 gaccgccgtc gggggagaac gggttgtcag ctttacgcag gatgtcgtcg ttgccgctgg
     5281 tttcgggggc ttcgcgccat tcgagtttgc cgtcgatgag gaaaggctct ttggtgtagt
     5341 ggcgcatacc gtgtccgacg acggtatcga catcgtcgtg caacaggcct gcattcagca
     5401 attcgcggat aacgaaaggc agtccgcccg ctgcggtaaa gtgattcacg tcggccttgc
     5461 cgttcggata aacgcggatg agtagtggga tgatggagga aatttcgtcg aagtcgtccc
     5521 agttcaaaat cacgccggcc gcacgcgcca tagcgacgag gtgcatggtg tggttggtcg
     5581 aaccgccggt tgccatcagg ccaatcaagg cgttgataaa ggatttttcg gtcaacattt
     5641 cgcccaaagg tttaatcgtg ccgtttttga tgccgcgcgc gaggtgtccg gcggcgtagc
     5701 gagtcagcgc ttcgcgcagg tcggtgtaag ggtggacgaa ggcggcggca ggcaggtgca
     5761 cgcccatcat ttccatcatc atttggttgg agtttgccgt gccgtagaaa gtgcaggtgc
     5821 ccgggctgtg gtaagaaccc atttcgcttt tcaaaagttc gttgcgtccg accttgcctt
     5881 cggcgaaaag ctggcgggtg cgggcttttt ctttgttgcc gataccgctg gacatcgggc
     5941 ctgcggggac gaagataccc ggaatatgac cgaacgaaag cgcgcctatc atcaaacccg
     6001 gaacgatttt gtcgcatacg cccataaaca ggctgccgtc aaacatttga tgcgacagcc
     6061 cgacggcggt actcatggca atcacgtcgc gggagaacag cgacagttcc atgccggcgt
     6121 agccttgcgt gatgccgtcg cacatggcgg gcgtgccgcc ggcgacttgg gcggtcgcgc
     6181 cgtttttctg cgcttcgtct ttgatttggt cagggaagtc tttaaacggc tggtgtgcgg
     6241 aaaccatgtc gttgtaggcg gtgatgatgc ctaagttggg gacggtttcc tgaagcattt
     6301 cgattttgat acttttaggc atggcagcat agccgtgtgc caagttgctg cagccgagct
     6361 ggttgcgctc taagcgtccc atttgtttgg cactgcggat cttcgccaga tatttttcac
     6421 gcgtcggacg gctgcgttca ataatgcgcc cggtgatttc ggcgagtttg gagtggatag
     6481 gagtagtgtt cacggtcggt ctcctgtcgg aacggggggt attggggatt tgtttgtgcg
     6541 tttctgattt ttgtatcggg tattcagacg gtaagtatag tggattaaca aaaaccagta
     6601 cggcgttgcc tcgccttgcc gtattatctg tactgtctgc ggcttcgtcg ccttgtcctg
     6661 atttttgtta atccactata ttttaaaagg tatgccgtct gaaagtggga agcgggtgtt
     6721 attatagtac aaaatttgta attttgttac aaaaaaatca gacatcgaaa agaaatttga
     6781 tttaaatcgc agaatctttc gattgttgta acggaatagg ggaaacctgc ccgatttttg
     6841 gactaggtca aataaattgt aaaaatggga atagacaaaa agtgtagcgg tgtgtagtat
     6901 tactactcat tatgccgcct gcctttgttt ccgatattgc gatgcagcgt gatggggaaa
     6961 acaggtttca aacggcatcg aaaaattctt tcctgacgag ataatacgat gagtacacaa
     7021 acaaattttg atttggtgtt gttcggtgcg accggcgatt tggcgatgcg caagctgttg
     7081 ccctgtctgt accaggcgca tgttgccggt ctgcttcatc ccgaagggcg tattttgggg
     7141 gtcagccgca gcgagttgga taccgaaggt tttctggcga aggtggaaac cagttccaaa
     7201 atccatgtga aagaaaattt ttccgatgag gcttgggcat cgtttgtcga acgtttcgca
     7261 tatctcaaag tcgatgttac gcagccggac gattttgccg ctttgggcga tttggtcaaa
     7321 gcgcgcaaag aaaccgacaa tgtcgtcatc tatctttcca ccgcgccgaa attcttcgcg
     7381 caaacatgtg aaaaccttgc caaaatcggt ttgaacgccg acaacgtgcg tgtggttttg
     7441 gaaaaaccgt tgggtacgga tttggcttct tcccagcaaa tcaataccga tgtcgcgcgt
     7501 tatttcaaag aagggcaaat ttaccgcatc gaccactacc ttggcaaaga aagcctgcaa
     7561 aacctgcttg cgctgcgttt tgccaatgta atgttcgagc cgctgtggaa caataaatac
     7621 atcgaaagcg tgcagttgac catcgccgag cagttgggcg tggaagaacg cggcgagttt
     7681 tacgacatta ccggcgcgtt gcgcgatatg gtgcaaaatc acttgatgca aatgctgtgc
     7741 atgactgcga tggaagcccc cgccagcttg gatgccgacg cggtgcgcga tgaaaaagtc
     7801 aaagtcatca agtcattgaa gccgctgacc gtcgaatctg tcaatgaaaa tgtcgtgcgc
     7861 ggacaatata ccgccgccaa aggcatgaac ggctatcttg aagaaatcaa cgttccgcaa
     7921 gacagcttta ccgaaaccta cgtcgccatt aaagccgaaa tcgaaaacga acgctggaag
     7981 ggcgttccct tctacctgcg taccggcaag cgcatggcgg gcaaagtggc ggaaatcgtt
     8041 ttgaacttca aagatttgaa cagccatatt tttgaaggca gccgcaccgc gcccaaccgg
     8101 ctcgttatcg agttgcaacc atatgaatcc gtgcgcctct atacgcagat gaaaaccccg
     8161 ggggcaggaa ataaggtcga aaccgtgccg ctggcaaccg atttgggcaa agcattggaa
     8221 agccgccgcg cggaagctta cgagcgcctg ctgctggatg tgattaacgg caaactcgct
     8281 ttattcaacc gccgcgacga actcgaagcc gcgtgggaat atgtgatgcc gattttggaa
     8341 aactggacaa ataacaccac gccgccgcac ggctacggcg cacactcgtg ggggcctgaa
     8401 gccgcgcgcg aactattggc gcgcgacgga cacaagtggc acgaagagca gtaatacaat
     8461 aatgcgttca gacggcatgg ggtttgaaat gccgtctgaa cgtaagtaaa gca
//
LOCUS       DAWITQ010000082         8513 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.082, whole genome shotgun sequence.
ACCESSION   DAWITQ010000082 DAWITQ010000000
VERSION     DAWITQ010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8513)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8513)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8513
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.082"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            96..1280
                     /gene="coaBC"
                     /locus_tag="WIX18_001379"
     CDS             96..1280
                     /gene="coaBC"
                     /locus_tag="WIX18_001379"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HEZ5238477.1"
                     /translation="MGKHILLGVTGSIAAYKSCELVRLLKKQGHSVTVVMSRSATEFV
                     SPLTFQALSGNPVLTDTHGGNGSNGMEHINLTRNADVFLIAPASMNTVAKICNGVADN
                     LLTSLAAARKCPLAIAPAMNVEMWLNPANQRNIAQLVSDGITVYMPGLGEQACGENGM
                     GRMPEPAELLDLLPDLWTPKILRGKKILITAGATFEAIDPVRGITNTSSGKMGVALAR
                     ACRAAGAEVSLIHGQLQTALPFGISDTVQAVSAEDMHRAVHRLIDKQDAFISVAAVSD
                     YKVKNRSTQKFKKDKNAKPLSIELDENPDILASIASLPNPPFCIGFAAETENVMAYAR
                     EKRIKKKIPVIVANDVSIAMGKPTNRITIIGDDEELSFPETSKDEAAMQIVERLAVYL
                     NK"
     gene            complement(1347..3503)
                     /locus_tag="WIX18_001380"
     CDS             complement(1347..3503)
                     /locus_tag="WIX18_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEZ5238478.1"
                     /translation="MPVPQPTAPYDPLTAEARTLLFHTASYLKPEEQAELEKAVAYAF
                     RAHDGQTRKSGEPYITHPIAVATQLAVWHMDVQGLCAGVMHDVLEDTGVTKGEMAAVF
                     GNTIAEMVDGLSKLEKLKFEDHAEHQAESFRKLILAMTKDVRVIVVKLADRLHNMRTL
                     GSMRPDKRRRIARETLEIYAQIANRIGLNNAYQELQDLSFQNLHPNRYETLKKAMDKS
                     RKNRQDVVGKVLRAFGQRLVGANIEAKIKGREKNLYGIHQKMMAKKLRFAEVMDIYGF
                     RVIVNSIPACYAALGALHTLYQPKPGRFKDYIAIPKSNGYQSLHTTLVGPYGLPIEVQ
                     IRTKEMDAVAEGGIAGHWSYKSYSKMVDQAVLHTNRWLKNILDLQASSANAIEFLEHV
                     KVDLFPNEIYILTPKGKILTLPKGATPVDFAYAVHTDIGHKTVAARINNIMMPLRTKL
                     KTGDSVEIITSEHAKPNPAWLNFAVSGRARSAIRQYIKNLNRHDAVVLGESLLQKALS
                     SLLPKDVLLSDGIKEKYLADLNDKQTSFEEVLYNVGMGHTLPVYVAMHIAELAGEHFG
                     SEVRLSSIKVDGQESGHIHFAECCHPVPGDSIRLLLVKGKGMIIHRDTCPTLLKSDPE
                     QQLDADWENMNGQNYRVGLQVQSEDSHGLLALMAQAISDSGADIESVETPSKSQSGTE
                     GFVEFKFLLKVKNLNQLNQIIQNLHSIPYIRKVIRS"
     gene            complement(3596..3802)
                     /locus_tag="WIX18_001381"
     CDS             complement(3596..3802)
                     /locus_tag="WIX18_001381"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HEZ5238479.1"
                     /translation="MARITTEDCTGKISNHFDLTLVAARRARQLENGNTPLVDDARNN
                     KPTVTALREIAAGHIGTELLTRNK"
     gene            complement(3861..4478)
                     /gene="gmk"
                     /locus_tag="WIX18_001382"
     CDS             complement(3861..4478)
                     /gene="gmk"
                     /locus_tag="WIX18_001382"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEZ5238480.1"
                     /translation="MSAYRKGNIFIISAASGTGKTTLVSRLLANHNGLRVSVSHTTRP
                     PREGEVNGVHYHFVSKEEFESLIAQEAFLEYADVFGNYYGTSAEGVNALAAAGYDVIL
                     EIDVQGAAQVRNALPEAVGIFILPPSFDVLAARLNGRGTDSREVIQRRLSKARHEIEQ
                     SVLFDFVVVNDDLARAEEDLRHIVNACRLKRSRQLGFIADLLENS"
     gene            4606..5205
                     /locus_tag="WIX18_001383"
     CDS             4606..5205
                     /locus_tag="WIX18_001383"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HEZ5238481.1"
                     /translation="MALKTSNLEHAMLVHPEAMSVGALADKIRKIENWPQKGILFHDI
                     TPVLQSAEYFRLLVDLLVYRYMDQKIDIVAGLDARGFIIGAALAYHLNVGFVPIRKKG
                     KLPFETVSQSYALEYGEAAVEIHTDAVKPGSRVLLVDDLVATGGTMLAGLELIRKLGG
                     EIVEAAAILEFTDLQGGKNIRASGAPLFTLLQNEGCMKG"
     gene            complement(5251..6039)
                     /locus_tag="WIX18_001384"
     CDS             complement(5251..6039)
                     /locus_tag="WIX18_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEZ5238482.1"
                     /translation="MNPKIVFFDIDDTLYRKYTDTLRPSVKTAVAALRGKGILTALAT
                     GRSLATIPEKVRDMMAETGMDAVVTINGQFALLHGKTVREVPMDAGLMGRVCAHLDGL
                     GMDYAFVGGEGIAVSALSECVCRALQHIASDFFADKDYFSSKPVYQMLVFAEENEMPP
                     WSDIVEREGLKTVRWHEEAVDLLPAGMSKTDGIRSVVEALGLEMADVMAFGDGLNDVE
                     MLSEVGFGVAMGNGEQAVKEAAKYVCPGVDEDGVLRGLQDLGVI"
     gene            6364..7719
                     /gene="yegQ"
                     /locus_tag="WIX18_001385"
     CDS             6364..7719
                     /gene="yegQ"
                     /locus_tag="WIX18_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HEZ5238483.1"
                     /translation="MKAPELLLPAGGLERMRTAYDYGADAVYAGSPRYSLRARNNEFA
                     KLDVLEQGIKEAHERNKKFFLTVNTLPHNSKLKTFVSDMEPLIAMKPDALIMADPGLI
                     MTVREKWPEMPIHLSVQANTTNYWGVKFWQNIGVERIILSRELSMEEIAEIRQQCPDI
                     ELEVFIHGALCIAYSGRCLLSGYFNHRDPNQGTCTNSCRWDYKVHNATESDAGDAQLL
                     QGFNFEKAQEEANQNFEGINGQKRHPYADKVFLIEESNRPGEMMPIMEDEHGTYIMNS
                     KDLRGIEVVEKLAKIGVDSLKVEGRTKSLYYVARVAQSYRKAIDDAVAGRPFDYSLLS
                     ELEGLANRGYTSGFLERHHTQDYQNYLTGHSTAKQSQYVGHVTEIDKNGWATIEVKNR
                     FAVGDSLEIIHPNGNQTIKLEQMARKGQPVDVAPGNGIQVKIPDMQGKEKALIARVLN
                     P"
     gene            7853..8329
                     /locus_tag="WIX18_001386"
     CDS             7853..8329
                     /locus_tag="WIX18_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease"
                     /protein_id="HEZ5238484.1"
                     /translation="MLAVCQSGSAPKNAHTASAGTPAGESCKVIRDDTAGSGKNIIYR
                     CCNGQAAINAAIADGVLESGIPVSFGGGGVPVANGRNLVTRQAANGVGKSDSEACEHA
                     LINAARKFQQTAGKLGGRGVTGFHSYFDKQPLQGGQYDCQAGSFHVRVVMRANVVR"
BASE COUNT         2148 a         2321 c         2029 g         2015 t
ORIGIN      
        1 ttcagacggc attttgtatc caaaacggta actaatgtat ccgtactttg ttatagaatg
       61 gctgctgttt ttcttcgtaa ttagaaattg tcaaaatggg caaacatatt cttttaggtg
      121 taacgggcag tattgcggcg tataagtctt gcgagttggt gcgactgctg aaaaaacagg
      181 ggcattcggt tacggtggtt atgagccgct cggcaactga atttgtttct ccgctgactt
      241 ttcaggcttt aagcggcaat cctgtcctga ccgacacgca cggcggcaac ggttcaaacg
      301 gtatggaaca tatcaacctg acccggaatg cggatgtttt tctgattgcg ccggcaagta
      361 tgaataccgt ggcaaaaatc tgtaacggcg tggcagataa cctactgacc agtctggcag
      421 ccgcacggaa atgtccgctt gccatcgctc ccgcgatgaa tgtggaaatg tggctcaacc
      481 ctgccaacca acggaatatc gcacaactgg tttcagacgg cattactgtc tatatgccgg
      541 gcttgggcga acaggcttgc ggagaaaatg gcatgggaag gatgccggaa cctgccgaat
      601 tgctggattt gcttccggac ttgtggacac cgaaaatttt aaggggcaag aaaatcttga
      661 ttaccgcagg tgcgacattt gaagccattg accctgtcag gggcatcaca aatacctcca
      721 gcggaaaaat gggggtagct ttggcgcggg cgtgccgtgc cgccggtgcg gaagtcagcc
      781 tgattcacgg acagcttcaa accgcgctgc ctttcggcat atccgatacg gttcaagccg
      841 tcagcgctga agatatgcat cgcgcagtgc atcgtttaat cgacaaacaa gatgctttta
      901 tttctgttgc cgccgtctca gactataagg ttaaaaacag gagtacgcaa aaattcaaaa
      961 aagataaaaa tgccaaacca ttatccatcg aattggatga gaaccccgat attttggctt
     1021 ctattgcctc attgccgaac ccgccgttct gcatcggttt tgccgctgaa acggagaatg
     1081 taatggcata tgcgcgagaa aaacgtatta agaaaaaaat accagtgatc gttgccaatg
     1141 atgtttcaat cgcgatgggc aaaccgacca accggattac cattatcggg gacgacgagg
     1201 aactgtcttt tcccgaaaca agtaaagatg aagcggcaat gcagattgtt gaaaggcttg
     1261 ccgtatattt gaacaaataa gcaattgaac ggataaacca taaagcgggt tgcctgttaa
     1321 tcaaaaggca acccgtttta cctgcttcaa cttctgatga ctttgcggat atatggaata
     1381 ctatgcagat tttgaataat ctgattcaat tgattcagat tcttgacttt caataagaat
     1441 ttgaattcga caaaaccttc cgttcccgac tgggatttag acggtgtttc gaccgactca
     1501 atgtccgcac cggaatcgga aatcgcttgc gccattaatg ccagcaagcc gtggctgtct
     1561 tccgattgga cttgaagccc gacacggtag ttctgcccgt tcatattttc ccagtctgca
     1621 tccagctgct gttcgggatc ggactttaac aacgtcgggc aggtatccct atggataatc
     1681 atgccttttc ccttaaccaa cagcaaacgg atggaatcgc cgggaaccgg atggcagcac
     1741 tctgcaaaat gaatatgccc gctttcctga ccatcaactt taatggaact gagcctgacc
     1801 tcgctgccga aatgctcccc tgccaactcg gcaatgtgca tggcgacata aacaggcagg
     1861 gtatgcccca taccgacgtt gtacagcact tcctcaaatg aagtctgttt gtcgttgaga
     1921 tcggcaaggt atttttcttt aatgccgtct gaaagcagga catctttggg cagcaaactg
     1981 gacagggctt tttgtaagag gctctctccc aaaacgaccg catcgtgccg gttaaggttt
     2041 ttaatatatt ggcgtatggc actgcgcgcc ctgcctgaca cggcgaaatt caaccatgca
     2101 ggattgggtt tggcatgttc ggatgtaata atttcgacgg aatcgccggt tttgagcttc
     2161 gtacgcaacg gcatcatgat attgttgata cgtgcggcaa cggttttgtg cccgatatcg
     2221 gtatgcaccg cataagcaaa atcgacaggc gttgcccctt tgggcaaagt taggattttt
     2281 ccttttggcg taaggatgta gatttcgttc ggaaacaaat cgactttgac gtgttcgaga
     2341 aactcaatgg cattggcact gcttgcctgc aaatctaaga tatttttcag ccaccggttt
     2401 gtgtgaagca ccgcctgatc gaccatctta gaatatgatt tatagctcca atgtccggcg
     2461 attccacctt cggcaacagc atccatttcc ttggtacgta tctgaacttc aatcggcaag
     2521 ccgtaagggc cgaccaaagt cgtatgcaga ctttgatacc cgttgctttt cggaatggcg
     2581 atatagtctt tgaaccgccc gggcttgggc tgatagaggg tgtgcaatgc gccgagtgcg
     2641 gcataacagg ctggaatgct gttgacaatg acgcggaaac cgtaaatatc cataacctcg
     2701 gcaaagcgca gctttttcgc catcattttc tgatggatgc cgtacaggtt tttttccctg
     2761 cctttgattt tggcctctat attcgcgcct accagccgct ggccgaatgc gcgcaagact
     2821 ttgccgacaa cgtcctgccg gttcttccgg ctcttgtcca tcgctttttt taaagtctcg
     2881 tagcggttgg gatgcaggtt ttggaacgat aaatcctgaa gctcttgata tgcgttattc
     2941 aaacctatac ggttggcaat ctgtgcatag atttcaaggg tttcccttgc aatccggcgg
     3001 cgtttgtccg ggcgcatcga accgagcgtc cgcatattgt gcaggcggtc ggcaagtttg
     3061 acgacgatga cgcgcacatc tttggtcatc gccaaaatca gtttgcggaa actctccgcc
     3121 tgatgttccg catgatcttc aaatttgagt ttttcgagtt tggacagccc gtccaccatc
     3181 tcggcaatcg tattgccgaa caccgccgcc atttcccctt ttgtcacgcc cgtatcttcc
     3241 aatacgtcgt gcattacacc tgcacaaaga ccctgtacgt ccatatgcca aaccgcaagc
     3301 tgtgtcgcaa cggcaatcgg atgcgtaatg tatggttcgc cacttttgcg ggtttgcccg
     3361 tcgtgggcgc gaaacgcata ggcgacggct ttttcaagct ccgcctgttc ctcgggcttg
     3421 aggtaggagg ctgtatggaa aagcagggta cgcgcttcgg cggtcagagg gtcgtaaggt
     3481 gcggtgggtt gagggacagg catttcagac ggctttcgga acatatttta tttttcgttt
     3541 caaaccgtcg gactgcacgg cggcagaatg tgccgacgtg cgtttccggc agaatttatt
     3601 tattgcgcgt caacagttcc gtaccgatat gcccggcggc gatttccctt aaggcggtaa
     3661 cggtcggttt gttattgcgg gcatcgtcca caagcggcgt gttgccgttc tcaagctggc
     3721 gggcgcggcg agccgctacc aatgtcaggt caaaatggtt ggaaattttt ccggtacagt
     3781 cttcggtggt aatacgtgcc atattatttg ctttctttca aaaatattta aattgggaaa
     3841 ccgagtattt tcgcggtttt ttaggaattt tccaacaaat ctgcaataaa ccccagttgc
     3901 cgcgaccttt tcagacggca ggcattcaca atatggcgca aatcctcctc cgctcgcgcc
     3961 aagtcgtcat tgaccacgac aaagtcaaac aatacggact gctcgatttc atgccttgcc
     4021 ttcgacagcc tcctttggat aacttcccga ctgtccgtcc cgcgtccgtt cagacgtgca
     4081 gcaagcacat cgaaagacgg cggcaggata aagatgccga cggcttccgg cagcgcgttg
     4141 cgaacctgcg ccgcgccctg aacgtcgatt tccaaaatta cgtcatagcc tgccgccgcc
     4201 aaagcattca cgccctccgc gcttgtgccg taatagttgc cgaacacgtc tgcgtattcc
     4261 aaaaaagctt cctgcgcgat aagcgactca aactcttctt tagaaacaaa atgataatgt
     4321 acgccgttta cttcgccttc acgcggcgga cgcgtcgtgt gcgatacgga aacgcgcaaa
     4381 ccgttatggt ttgccaacag ccgcgacacc agcgtggttt tgcccgtgcc ggaagcggcc
     4441 gaaatgataa agatgttgcc ttttcgataa gcggacatat tttttacctg tatattttcc
     4501 agccgattgt atcacaatgg acacccagtt tcctatttgc cgatgcccat attttgccgc
     4561 tattgttttg attgatttgg caagcggcag gctgacggct acaatatggc gttaaaaaca
     4621 tcaaacttgg aacacgcaat gctggttcat cccgaagcta tgagtgtcgg cgcgcttgcc
     4681 gacaaaatcc gcaaaatcga aaactggccg caaaaaggca tcttattcca cgacatcacg
     4741 cccgtcctgc aaagtgcgga atacttccgc cttttagttg atttattggt ttaccgctat
     4801 atggatcaga aaatcgacat cgttgccggt ttggacgcgc gcggcttcat tatcggcgcg
     4861 gcactcgcct accatctcaa cgtcggtttt gtccccatcc gcaaaaaagg caagctgcct
     4921 tttgaaaccg tatcgcaaag ctacgcgctc gaatacgggg aagctgcggt ggaaatccac
     4981 accgatgccg tcaaacccgg ttcgcgcgtg ctgctggtcg atgatttggt tgccacgggc
     5041 ggcacaatgc ttgccgggct ggaactgatc cgcaaactcg gcggagaaat tgtcgaagcc
     5101 gccgccattt tggaatttac cgaccttcaa ggcggcaaga atatccgtgc aagcggcgcg
     5161 cccttattta ccctgcttca aaacgaaggc tgtatgaagg gctgaaaacc gaccctgccg
     5221 tctgaaaccg gcagggttgt tatgatgcgt tcaaatcacg cccaaatctt gcaagcccct
     5281 caacacgccg tcttcatcaa cgccggggca aacatatttc gccgcctctt tcactgcctg
     5341 ttccccgtta cccattgcca caccgaaccc gacttcagac agcatttcca catcgttcaa
     5401 accgtcgccg aacgccatca cgtccgccat ttccaaaccc aatgcttcaa ccacgcttct
     5461 gatgccgtct gttttcgaca ttcccgcagg cagcagatcg accgcttcct cgtgccagcg
     5521 caccgttttc aagccttccc gttccacaat atccgaccag ggcggcattt cgttttcctc
     5581 cgcaaacacc agcatctgat acaccggttt gcttgaaaaa taatccttat cggcaaaaaa
     5641 atcgctggcg atatgctgca aggcgcggca cacgcattcc gacagcgcgg acacggcgat
     5701 cccctctccg ccgacaaacg cataatccat acccaagcca tccaaatgcg cgcaaaccct
     5761 gcccatcaaa ccggcatcca tcggtacttc gcgcacagtt tttccgtgca gcagcgcaaa
     5821 ctgtccgttt atcgttacca cggcatccat gcccgtttcc gccatcatgt ccctgacctt
     5881 ttcgggaatc gtcgccaaag accgccccgt tgccaacgcc gtcaatatgc ctttgccgcg
     5941 caaagccgcc accgccgttt tcacggaagg acgcaaggta tccgtatatt tgcggtacag
     6001 cgtatcgtca atatcgaaaa acacgatttt aggattcatc acattctctc tcgcattcaa
     6061 actgccgcat tgtatcccaa tcaggcaaat acttgataaa tccttataaa tttcccggca
     6121 aaattgaccg cgaacacgaa aaggcggata atccgcccat cctcaaaccc ttttcagacg
     6181 gcatttgcag caatgccgtc tgaaacattt ttacaaagca cacaaatcat gtttcaacac
     6241 acaggacgac acataaagcg tcgccctatg tgttgccctg attcggaagg ggttacgccc
     6301 ctcccaaata aagtctgatt ctaccgccct aaagggcggg gtttcaaccg aaaaggaaac
     6361 acgatgaaag cacccgaact cttattgccc gccggcggat tggaaagaat gcgcaccgcc
     6421 tacgactacg gcgcagatgc cgtttacgcc ggcagcccgc gttattccct gcgcgcccgc
     6481 aacaacgaat ttgccaaact tgatgtttta gaacaaggca ttaaagaagc gcacgagcgc
     6541 aacaaaaaat tctttttgac cgtcaacacc ctgccgcaca attccaaact caaaaccttt
     6601 gtttccgata tggagccgct gattgcgatg aagcccgacg cgctgattat ggcggatccg
     6661 ggcttgatta tgaccgtgcg cgaaaaatgg ccggaaatgc cgatccacct gtccgtacag
     6721 gcgaacacca ccaactactg gggcgtgaaa ttctggcaga acatcggcgt cgaacgcatt
     6781 attctgtcac gcgaattgag tatggaagaa atcgccgaaa tccgccaaca atgccccgac
     6841 atcgaactcg aagtcttcat ccacggcgca ttgtgcatcg cctactccgg ccgttgccta
     6901 ttgtcgggct atttcaacca ccgcgacccc aaccaaggca cttgcaccaa ctcttgccgt
     6961 tgggattaca aagtccacaa cgctacggaa agcgatgcgg gcgatgccca gcttctgcaa
     7021 ggttttaact ttgaaaaagc ccaagaagaa gccaaccaaa acttcgaagg catcaacggt
     7081 cagaaacgcc atccctacgc cgacaaggtt ttcctgattg aagaatccaa ccgtccgggc
     7141 gagatgatgc cgattatgga agacgaacac ggcacctaca tcatgaactc caaagacctt
     7201 cgtggcattg aagtggttga gaaactcgcc aaaatcggcg tggacagcct caaagtcgaa
     7261 ggccgcacca agtcgctcta ttatgtcgca cgcgtcgccc aatcctaccg caaagcgatt
     7321 gacgatgccg tcgcaggccg tccgtttgat tacagcctgt tgagcgaact cgaaggcctt
     7381 gccaaccgcg gctacaccag cggcttcctc gaacgccacc acactcagga ttatcaaaac
     7441 tacctgaccg gccattccac cgccaaacaa agccaatacg tcggacacgt taccgaaatc
     7501 gacaaaaacg gctgggcgac catcgaagtt aaaaaccgct tcgccgtcgg cgattcactc
     7561 gaaatcatcc acccgaacgg caaccaaacc atcaaattgg aacaaatggc ccgaaaaggc
     7621 cagcctgtcg atgtcgcacc cggcaacggc attcaggtca aaatccccga tatgcagggc
     7681 aaagaaaaag ccctcatcgc acgcgtgttg aacccctgag ccacaatgcc gtctgaaccc
     7741 cgttttcaga cggcattttg ttgaatctta cggtacaatg gcaatgattt cccaccgcaa
     7801 gcaaggatat ccgacatgaa aaaaaatcct catactctcc gccgccgccc tgatgctggc
     7861 agtctgccaa tccggcagcg cacctaaaaa cgcgcacacg gcatccgccg gcacaccggc
     7921 cggagaatca tgcaaagtca tccgggacga caccgcagga agcggcaaaa acatcattta
     7981 ccgttgctgc aacggtcagg cggcaataaa tgcagccatt gcagacggcg tattggaatc
     8041 agggattccc gtcagcttcg gcggcggggg cgtaccggtt gcaaacggca ggaatctggt
     8101 tacacggcaa gcagcaaacg gcgttggcaa atccgactcc gaggcctgcg aacacgccct
     8161 aatcaatgcc gcccgcaaat tccagcagac cgccggcaaa ctcggcgggc gcggcgttac
     8221 cggcttccac agctacttcg acaagcagcc gctgcaaggc ggacaatacg actgtcaggc
     8281 aggctcgttc cacgtccgtg tggtcatgcg cgccaatgtc gtccgttaac atatcggcaa
     8341 tcaaaaaatt aggctgtgtt ttagtaatct gttgatttca attatttgca aaggaaaaga
     8401 caattatttt ttcggttagg aagagaccta tcctattgaa tacatttaag ttaaatacgt
     8461 ctatcaacac tatattatag tggattaaca aaaatcagga caaggcgacg aag
//
LOCUS       DAWITQ010000083         8408 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.083, whole genome shotgun sequence.
ACCESSION   DAWITQ010000083 DAWITQ010000000
VERSION     DAWITQ010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8408)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8408)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8408
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.083"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(308..1240)
                     /gene="cysK"
                     /locus_tag="WIX18_001387"
     CDS             complement(308..1240)
                     /gene="cysK"
                     /locus_tag="WIX18_001387"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HEZ5238485.1"
                     /translation="MKIANSITELIGNTPLVKLNRLTEGLKAEVAVKLEFFNPGSSVK
                     DRIAEAMIEGAEKAGKINKNTVIVEATSGNTGVGLAMVCAARGYKLAITMPESMSKER
                     KMLLRAFGAELILTPAAEGMAGAIAKAKSLVDAHPDTYFMPRQFDNEANPEVHRKTTA
                     EEIWRDTDGKVDVFVAGVGTGGTITGVGEVLKKYKPEVKVVAVEPEASPVLSGGEKGP
                     HPIQGIGAGFIPTVLNTKIYDSITKVSNEAAFETARAIAEKEGILVGISSGAAVWSAL
                     QLAKQPENEGKLIVVLLPSYGERYLSTPLFADLA"
     gene            complement(1434..2039)
                     /locus_tag="WIX18_001388"
     CDS             complement(1434..2039)
                     /locus_tag="WIX18_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238486.1"
                     /translation="MILLHLDFLSALLYAAVFLFLIFRAGMLQWFWASIMLWLGISVL
                     GAKLMPGIWGMTRAAPLFIPHFYLTLGSIFFFIGHWNRKTDGNGWQADPEHPLLGLFA
                     VSNVSMTLAFVGICALVHYCFSGTVQVFVFAALLKLYALKPVYWFVLQFVLMAVAYVH
                     RCGIDRQPPSTFGGSQLRLGGLTAALMQVSVLVLLLSEIGR"
     gene            complement(2036..2887)
                     /gene="dapF"
                     /locus_tag="WIX18_001389"
     CDS             complement(2036..2887)
                     /gene="dapF"
                     /locus_tag="WIX18_001389"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEZ5238487.1"
                     /translation="MNTLKFTKMHGLGNDFMVIDAVSQDFTPEDAPIAAWADRFRGVG
                     FDQLLVVGRSETEGVDFRYRIFNADGSEVGQCGNGARCFARFVADKGLTDKKEICVET
                     ANGVIFPKLSDNGMVTVNMGKPRFMPSEIPFVPELGEGDDACIYGVHLESGIQPVSCV
                     NMGNPHAVIVVDDVECAPVRETGSLIEPHRQFPERVNVGFMQVVGRTAIRLRVFERGV
                     GETQACGTGACAAVVAGIRLGLLDEGKTVEVILPGGTLYIEWACGGDVMMTGPAETVF
                     EGELAYS"
     gene            3024..3320
                     /locus_tag="WIX18_001390"
     CDS             3024..3320
                     /locus_tag="WIX18_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238488.1"
                     /translation="MFRILLLLFPCAILAACTRNIPANPAVSNCAHLQNRTILYFDAH
                     GKPADGAVKGGFYKIIEIQGANCILIQDFNSTGNALGGSYVPDCRKSSLFPKNI"
     gene            3334..4002
                     /locus_tag="WIX18_001391"
     CDS             3334..4002
                     /locus_tag="WIX18_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEZ5238489.1"
                     /translation="MNHDITFLTLFLLGFFGGTHCIGMCGGLSSAFALQLPPHINRFW
                     LILLLNTGRVSSYTAIGLILGLIGQVGVSLDQTRVLQNILYTAANLLLLFLGLYLSGI
                     SSLAAKIEKIGKPIWRNLNPILNRLLPIKSIPACLAVGILWGWLPCGLVYSASLYALG
                     SGSAATGGLYMLAFALGTLPNLLAIGIFSLQLKKIMQNRYIRLCTGLSVSLWALWKLA
                     VLWL"
     gene            complement(4075..6195)
                     /gene="pnp"
                     /locus_tag="WIX18_001392"
     CDS             complement(4075..6195)
                     /gene="pnp"
                     /locus_tag="WIX18_001392"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEZ5238490.1"
                     /translation="MFDKHVKTFQYGNHTVTLETGEIARQAAAAVKVSMGDTVVLVAV
                     TTNKEVKEGQDFFPLTVDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRPL
                     FPEGFYHDIQIVAMVVSVDPEIDSDIPAMLGASAALVLSGVPFAGPIGAARVGYVNGV
                     YVLNPTKAELAKSQLDLVVAGTSKAVLMVESEAKILPEDVMLGAVVYGHDQMQVAINA
                     INEFADEVNPELWDWKAPETNEELVAKVRGIAGETIKEAFKIRQKQARSAKLDEAWSA
                     VKEALITEETDTLAANEIKGIFKHLEADVVRSQILDGQPRIDGRDTRTVRPLNIQTGV
                     LPRTHGSALFTRGETQALAVATLGTSRDEQIIDALSGEYTDRFMLHYNFPPYSTGEVG
                     RMGAPKRREIGHGRLAKRALLAVLPKPEDFSYTMRVVSEITESNGSSSMASVCGGCLS
                     LLSAGVPLKAHVAGIAMGLILEGNKFAVLTDILGDEDHLGDMDFKVAGTTEGVTALQM
                     DIKIQGITKEIMQIALAQAKEARLHILDQMKAAVAGPQELSAHAPRLFTMKINQDKIR
                     EVIGKGGETIRAITAETGTEINIAEDGTITIAATTQEAGDAAKKRIEQITAEVEVGKV
                     YEGTVVKILDNNVGAIVSVMPGKDGLVHISQIAHERVRNVGDYLQVGQVVNVKALEVD
                     DRGRVRLSIKALLDAPAREENAAE"
     gene            complement(6432..7295)
                     /locus_tag="WIX18_001393"
     CDS             complement(6432..7295)
                     /locus_tag="WIX18_001393"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEZ5238491.1"
                     /translation="MSEIGLVKIYSGKVRDLYEIDDKRMLMVASDRLSAFDVILDDPI
                     PSKGEILTQISNFWFKKLAHIMPNHFTGQTVYDVLPENEAKALEKRAVVAKKLTPVKV
                     EAIVRGYLAGSGWKDYQKTGSVCGIQLPEGMQEAQQLPEVIFTPSTKAAVGDHDENIS
                     FEECERIIGKELAAEVRAKAIQLYTEAAEYAKSRGIIICDTKFEFGLDTNGTLTLMDE
                     VLTPDSSRFWPADQYKVGTNPPSFDKQFVRDWLEQSGWNKKAPAPKVPADVIQKTVEK
                     YREALTLLTQD"
     gene            7495..8358
                     /gene="rfbD"
                     /locus_tag="WIX18_001394"
     CDS             7495..8358
                     /gene="rfbD"
                     /locus_tag="WIX18_001394"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HEZ5238492.1"
                     /translation="MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCN
                     MVKSFQPDAIVNTAAYTAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDY
                     IFDGKGKRPYQESDFTNPSNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVR
                     TMLNLARERSPLSAVHNQIGCPTYAGDLAAAIIRLLQQTSPVRGIYHYAGGKSVSWYE
                     FAQHIFQAASQQQTSFPVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFGIKPSDWQ
                     KALAQVVSKLL"
BASE COUNT         2002 a         2424 c         1950 g         2032 t
ORIGIN      
        1 gtggattaac aaaaaccagt acagcgttgc ctcgccttgc cgtactatct gtactgtctg
       61 cggcttcatt gccttgtcct gatttttgtt aatccactat atttgtactg tctgcggctt
      121 cgttgccttg tcctgatttt tgttaatcca ctataaaaaa tatttccctc aagcgatgtg
      181 gcgacaccaa cacctgatta aaacacaacc ggcgttttcg gcatatatgc aaaaacgcat
      241 tttccggcac ggcgttacac cgataccgaa aaatgcgtct gaatgtttcg acaatccgat
      301 taaagcatta tgccaaatct gcaaaaagtg gcgtagagag atagcgttcg ccataagaag
      361 gcagcagcac gactatcagc ttgccttcgt tttcaggctg tttggcaagc tgcaacgcac
      421 tccaaaccgc cgcaccggaa gaaataccca ccaaaatgcc ttctttttcc gctattgcgc
      481 gggcggtttc aaaagccgct tcgttcgaca ctttggtaat gctgtcgtaa attttggtat
      541 tcaaaacggt cggaataaag cctgcgccga tgccttgaat cgggtgcggg cctttttcgc
      601 cgccgctcaa tacgggtgaa gcttcaggct cgacggcaac cactttaact tcgggtttgt
      661 attttttcaa cacttcgccc acgccggtaa tcgtaccgcc cgtgccgacg ccggcaacga
      721 agacatcgac tttgccgtcc gtatcccgcc aaatttcctc ggcggttgtt ttgcggtgga
      781 cttcggggtt tgcctcattg tcgaactggc gcggcataaa ataagtgtcg ggatgcgcgt
      841 ccaccaagga tttcgctttg gcaatcgcgc ccgccatacc ttcggcggca ggggtcagaa
      901 tcagctccgc accaaacgcg cgcaacagca ttttgcgctc cttactcatg ctttccggca
      961 tggtaatcgc cagcttgtag ccgcgtgcgg cacataccat tgccaaaccg acacccgtat
     1021 tgccgctggt tgcttcgaca atgacggtgt ttttgttgat tttgcccgct ttttcggcac
     1081 cctcgatcat tgcttcggca atgcggtctt tgacgctgct gcctggattg aaaaattcca
     1141 gtttcacggc aacctccgcc ttcaaacctt cggtcagacg gttcagtttg accaaaggcg
     1201 tgttgccgat tagttcggtg atgctgtttg caattttcat cttctgctcc tgaataataa
     1261 ggtttcgaca gtaaggcgca atccccatag gcatcctgtc cgattgcagg ggatttgcgc
     1321 cgaaacataa acaaatttcg gatatggctt tatcctaaac ctatgccgcc taaaaaacca
     1381 atatccaaaa tttctttctt tataactttt tgttccgata cggccgcacc gtattatctt
     1441 ccaatttctg aaagcagcag caccagtacc gagacctgca tcaacgctgc cgtcaacccg
     1501 ccgagtcgca gctgcgagcc gccgaacgtt gacggcggct gccggtctat accgcagcgg
     1561 tggacatagg caaccgccat cagcacaaac tgcaacacga accaataaac cggcttcagc
     1621 gcataaagtt tgagcagtgc cgcaaacaca aacacttgaa ccgttcccga aaagcaataa
     1681 tgcaccaacg cacatattcc gacaaaagca agcgtcatcg atacattact gacggcaaac
     1741 agcccgagca gaggatgttc ggggtctgcc tgccatccgt ttccatccgt tttccggttc
     1801 caatgcccga tgaaaaaaaa tatgctgccc aaagtcaggt aaaaatgggg gatgaacaag
     1861 ggcgcggcgc gggtcattcc ccatatgccg ggcatcagct ttgcccccaa aaccgatatg
     1921 cccagccaca gcataatact cgcccaaaac cattgcaaca ttcctgcgcg gaatatcaga
     1981 aacagaaaaa ccgccgcata cagtaaggca gacaaaaaat ccaaatgcag caaaatcatg
     2041 aatacgccaa ctcgccttca aacaccgttt ccgcagggcc ggtcatcatc acatcgccgc
     2101 cgcaggccca ttcgatatat aaagttccgc ccggcaaaat cacctctacc gttttccctt
     2161 catccaacaa ccccagacgg atacccgcca ccacagccgc acacgcgccc gtaccgcacg
     2221 cttgggtttc gcccacgccg cgctcgaaca cgcgcaaacg aatcgcggtt cggccgacaa
     2281 cctgcataaa gccgacgttg acgcgttcgg gaaactgcct gtgcggttcg ataagcgaac
     2341 cggtttcgcg caccggcgcg cattctacgt catcgaccac aatcaccgca tgggggttgc
     2401 ccatattgac gcagctgaca ggctgaatgc cggattcgag atgcaccccg taaatacagg
     2461 catcatcccc ctcgcccaat tcggggacaa acggtatttc agacggcata aacctcggtt
     2521 tgcccatatt gaccgtaacc atgccgttat cggacaattt cggaaaaata acgccatttg
     2581 ccgtttcaac acaaatttct ttcttatcgg tcaaaccctt gtctgcaaca aaacgggcaa
     2641 aacaacgcgc tccgttgccg cattgcccga cctcgctgcc gtcggcattg aaaatacggt
     2701 aacggaaatc cacgccttcg gtttccgaac gcccgaccac caaaagctgg tcgaagccca
     2761 cgcctcggaa gcggtccgcc catgccgcaa tcggcgcgtc ctcgggggta aaatcctgac
     2821 tgaccgcgtc aatcaccata aaatcgttgc ccaaaccgtg cattttggta aatttcaacg
     2881 tgttcatatt gttccgaaat cccgtatcgt ctgttgcttc cgaatccgaa atcccccgca
     2941 ccgaagggaa atgcttccat ctcccgccgc ctgaggatta aaatcagcca ttatactgtt
     3001 tgttacccct tacaagaaac accatgttcc gcatattact gttgcttttc ccttgtgcaa
     3061 tccttgccgc ctgcacccga aacataccgg caaacccggc cgtttcaaat tgcgcgcatc
     3121 ttcaaaaccg caccatcctg tattttgacg cacacggcaa acccgccgac ggcgcagtaa
     3181 agggcggatt ttacaaaatt atcgaaatac agggtgcaaa ctgcatcctt attcaagact
     3241 ttaacagcac gggcaatgcc ctcggcggat cctatgtgcc ggactgccgc aaatcatccc
     3301 ttttcccgaa aaatatttga cttcaaactg cctatgaacc acgacatcac tttcctcacc
     3361 ctgttcctac tcggtttctt cggcggaacg cactgcatcg gtatgtgcgg cggattaagc
     3421 agcgcgtttg cgctccaact ccccccgcat atcaaccgat tttggctgat cctgctgctt
     3481 aacacaggac gggtaagcag ctatacggca atcggcctga tactcggatt aatcggacag
     3541 gtcggcgttt cactcgacca aacccgcgtc ctgcagaata ttttatacac ggccgccaac
     3601 ctcctgctgc tctttttggg cttatacttg agcggtattt cttccttggc ggcaaaaatc
     3661 gagaaaatcg gcaaaccgat atggcggaac ctgaacccga tactcaaccg gctgttaccc
     3721 ataaaatcca tacccgcctg ccttgcggtc ggaatattat ggggctggct gccgtgcgga
     3781 ctggtttaca gcgcgtcgct ttacgcgctg ggaagcggta gtgcggcaac gggcgggtta
     3841 tatatgcttg cctttgcact gggtacgctg cccaatcttt tggcaatcgg cattttttcc
     3901 ctgcaactga aaaaaatcat gcaaaaccga tatatccgcc tgtgtacggg attatccgta
     3961 tcattatggg cattatggaa acttgccgtc ctgtggctgt aagccccatt cattcccgat
     4021 acccgtaaaa aataccgtct gaaacctgtt cagacggcac tttcacccta agcgttactc
     4081 ggcggcattt tcctcacggg caggcgcgtc cagcagggct ttgatggaca gacggacacg
     4141 gcctctgtcg tccacttcca atgctttcac gttcaccacc tgaccgactt gcaggtagtc
     4201 gccgacattg cgtacgcgct cgtgggcgat ttggctgatg tgtaccaaac cgtctttgcc
     4261 cggcatcacg ctgacaatcg cgccgacgtt gttgtcgagg attttcacca cagtgccttc
     4321 atacactttg cccacttcca cttcggcagt aatctgctcg atgcgttttt tcgccgcatc
     4381 gccggcttct tgagtggtcg cggcaatggt aatcgtaccg tcttcggcaa tattgatttc
     4441 cgtaccggtt tcagcggtaa tcgcacggat ggtttcaccg cccttaccga taacttcgcg
     4501 gattttgtct tggttgattt tcatcgtaaa caaacgcggc gcgtgtgcgg acaactcttg
     4561 cgggcccgca acggcggctt tcatctgatc caagatgtgc agacgcgctt ctttggcctg
     4621 tgccaaagcg atttgcataa tttctttggt aatgccttgg attttgatgt ccatttgcag
     4681 cgcggtaacg ccttcggtcg taccggccac tttaaagtcc atatcgccca agtggtcttc
     4741 gtcgcccaaa atgtcggtca ggacggcaaa tttgttgcct tccagaatca gacccatcgc
     4801 gataccggca acgtgtgctt tcaaaggcac gccggcagac agcaggctca aacagccgcc
     4861 gcagacggaa gccatagagg aagagccgtt agattcggta atttcggaga ccacgcgcat
     4921 ggtgtagctg aaatcttcag gtttcggcaa tacggccaac aatgcacgtt tagccaaacg
     4981 gccgtgaccg atttcacggc gtttcggcgc gcccatgcgg cccacttcgc cggtagagta
     5041 cggcggaaag ttgtagtgca gcataaagcg gtcggtgtat tcgccggaca gcgcgtcgat
     5101 gatttgctcg tcgcgcgaag tacccaaagt cgctacggca agggcttggg tttcgccacg
     5161 ggtaaacaat gcggaaccgt gcgtgcgcgg caatacgccg gtttggatgt tcagcggacg
     5221 gacggtgcgg gtgtcgcggc cgtcgatgcg cggttggccg tccaaaattt ggctgcggac
     5281 gacatcggct tccaagtgtt tgaaaatgcc tttgatttcg ttggctgcca gcgtgtcggt
     5341 ttcttcggta atcaaggctt cttttaccgc actccaagct tcgtccaatt tggcagaacg
     5401 cgcttgtttt tgacggattt tgaacgcttc tttaatggtt tcgccggcaa tcccgcggac
     5461 tttggcaacc agttcctcat tggtttcagg tgctttccaa tcccaaagtt ccggattgac
     5521 ttcgtcggca aattcattga ttgcattgat ggcaacctgc atttgatcgt ggccgtaaac
     5581 caccgcgccc agcatcacgt cttcgggcag gattttggct tcggattcca ccatcaacac
     5641 ggctttggaa gtaccggcga ccaccaagtc caattgcgat ttcgccaatt cggctttagt
     5701 cgggttcaaa acgtacacgc cgtttacata accgacgcgt gccgcgccga tcgggccggc
     5761 aaacggtacg ccgctcaaca ccagcgcggc agacgcgccc aacattgcag gaatatcaga
     5821 atcgatttca ggatcgacgg acacgaccat cgctacgatt tggatgtcgt ggtagaaacc
     5881 ttcagggaac agcggacgaa tcggacggtc gatcagacgg ctggtcagga tttctttttc
     5941 gctttgtttg ccttcgcgtt tgaagaaacc gccgggaatt ttgcctgcgg cgtaagtgcg
     6001 ctcgaggtaa tcgacagtca gagggaagaa gtcttggcct tctttcactt ctttgttggt
     6061 ggtaacggca accaaaacca cggtgtcgcc catagagact ttaacggcag cggcggcttg
     6121 gcgggcaatt tcgccggttt ccaaagtaac ggtgtggttg ccgtattgga aagttttaac
     6181 gtgtttgtcg aacattattg ttcctttcaa aataccgcac tgctaaaaca ctaataatgc
     6241 acactaaaat ccgaatgtgc atagttaggg tttcagaccg tgcggcaggt tgtaaacaag
     6301 ctttcagacg acatttcgga cgctgaaagc aattccaaat tataaaggca accatcatta
     6361 aaatccagta ttgatacaat aaaaaggccg tctgaaccat atttctttca gacggccttc
     6421 aaacttaaaa atcaatcctg agtcagcaaa gtcaatgctt cccgatactt ctcgacagtt
     6481 ttctgaatca catcggcagg cactttcggc gcaggggctt ttttgttcca accgctttgt
     6541 tccagccagt cgcggacgaa ttgtttgtca aaagacggcg gattggtgcc gactttgtat
     6601 tggtcggcag gccaaaaacg gctcgaatcg ggagtcaata cctcatccat cagcgtcagc
     6661 gtaccgtttg tatccaaacc gaattcaaat ttggtatcgc aaatgatgat gccgcgcgat
     6721 ttggcatatt ccgccgcttc tgtataaagc tgaatcgctt tggcgcgcac ttccgccgcc
     6781 aattcttttc cgataatgcg ttcgcattct tcaaagctga tgttttcatc gtgatcgccg
     6841 actgcggctt tggttgaggg cgtaaaaatc acttcaggca gttgttgcgc ttcctgcata
     6901 ccttcaggca gttgaatacc gcaaaccgag ccggtttttt gataatcttt ccaaccgctg
     6961 cctgccagat aaccacgcac aatcgcctct actttcaccg gagtgagctt tttagccacg
     7021 acggcgcgtt tctctaaagc tttggcttcg ttttcaggca aaacatcgta aaccgtttga
     7081 ccggtaaagt ggttgggcat aatatgcgcc agttttttaa accaaaaatt ggaaatctgc
     7141 gtcagaatct cccctttgct cggaatcggg tcgtccaaaa tcacatcgaa tgcagacagg
     7201 cggtcggaag cgaccatcag catacgttta tcgtcgattt catataaatc gcgcactttt
     7261 ccagaataga tctttaccaa accaatctca ctcatttcgc acccccctga aaatatcttg
     7321 aaaataccga cccgacaccc gacaggtttg aatcacaaac cgatattcta accgaagtcg
     7381 gcgcaaaaca atacccatgg cacaaaaagc caacccgtca accgtcggca aagttttggc
     7441 actataatac cgacagcaag tcctacaata cactttcacc aaaggaaata cctcatgaga
     7501 atcctattga caggctcgaa aagccaactg gcacgctgcc tgcgcgaccg tcttccggaa
     7561 gactgggaaa ccattgcgac ggattccgca tccctagaca ttaccgatgc cgatgccgtc
     7621 tgcaacatgg tcaaaagttt ccaacccgac gccattgtca acacggctgc ctatactgcc
     7681 gtcgacaaag cggaaggcga tgcggcagcg gcatttgccg tcaatgcttc cgccgtttac
     7741 aaccttgcct tggcagcaca tcgcgcccat gcccgattca tccacatctc aaccgactat
     7801 atctttgacg gtaaagggaa aaggccctat caggaaagcg actttaccaa tccttccaat
     7861 gtatacggac aatccaaaac cgccggcgaa ctgctcgcac tgtctgccaa tcccgacagc
     7921 cttatcctgc ggacttcttg gctgtttagc gaatacgggg acaactttgt ccgcaccatg
     7981 ctgaaccttg cgcgggaacg ttccccgctg tccgccgtcc acaaccaaat cggctgcccg
     8041 acctatgccg gcgacctggc tgccgccatc atccgccttt tgcagcaaac gtcgcccgtg
     8101 cgcggcattt accactacgc cggcggcaaa tccgtatcct ggtacgaatt tgcccaacat
     8161 attttccaag cggcatcgca acagcagaca tccttccccg ttcccgaatt gactgccgtt
     8221 tcagacaagg aatatccgac cgccgccccc aggcccgcat acagcatttt ggactgccgc
     8281 aaaatcgaaa acgacttcgg catcaaaccg tcagactggc agaaagccct tgcacaggtc
     8341 gtttccaagc tgctctgatg ccgcccgcct ctccgtttcc gccgtcaagc accgccttgg
     8401 cggttttc
//
LOCUS       DAWITQ010000084         8389 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.084, whole genome shotgun sequence.
ACCESSION   DAWITQ010000084 DAWITQ010000000
VERSION     DAWITQ010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8389)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8389)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8389
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.084"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(547..2589)
                     /gene="recG"
                     /locus_tag="WIX18_001395"
     CDS             complement(547..2589)
                     /gene="recG"
                     /locus_tag="WIX18_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HEZ5238493.1"
                     /translation="MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETH
                     IMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQIADGSGSVLFLRFIHFYASHQKQ
                     TAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
                     QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKF
                     DELLAQQLSMRLARQKRIGGTAAALGGDGTLTQALRQALPFALTDAQEKVVSEICRDM
                     AQTYPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEILAEQHFIKFKQWLE
                     PLGIEVVRLFGSLRKKAKDEAKAKLADGSVKIAIGTHALFSDGVTFHNLGLTIVDEQH
                     RFGVAQRLALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDKLPPGRTPIKTRL
                     VNNVRRAEVEGFVLNTCRKGRQAYWVCPLIEESETLQLQTAAETLARLQTALPELNIG
                     LVHGRMKAAEKAEVMARFSSGELNVLVATTVIEVGVDVPNAALMVIEHAERMGLAQLH
                     QLRGRVGRGAAESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLG
                     ARQSGVPMLRFAKLEEDLHLLEQAREIAPILIEQNPEIVEAHLARWLSGREGYLGV"
     gene            complement(2675..3118)
                     /gene="secB"
                     /locus_tag="WIX18_001396"
     CDS             complement(2675..3118)
                     /gene="secB"
                     /locus_tag="WIX18_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HEZ5238494.1"
                     /translation="MSEELQPVFSIERLYVKDLSLEVPHAPQIFLEQGEPEVDMRVST
                     GSQKLEDGYYNVDVTVTVTAKLDNERTMFLNEVTQSGIFRLENIPEEDVQLLLGVACP
                     NILFPYAREAVSGTVTRAGFPPVLLAPINFEAIYQQQQEAEAAGA"
     gene            complement(3139..3396)
                     /gene="grxC"
                     /locus_tag="WIX18_001397"
     CDS             complement(3139..3396)
                     /gene="grxC"
                     /locus_tag="WIX18_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HEZ5238495.1"
                     /translation="MQTVTMYTGPFCPYCAMAKRLLHTAGVGHIDEIRVDASPEAFAE
                     MQQLSGQRSVPQIFIGETHVGGFTDLYRLQQEGGLDGLLNP"
     gene            3610..5103
                     /gene="rng"
                     /locus_tag="WIX18_001398"
     CDS             3610..5103
                     /gene="rng"
                     /locus_tag="WIX18_001398"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HEZ5238496.1"
                     /translation="MLSGLPIPKDIARPPETILVNITPQETRVAVLEENNICELHIER
                     NSEHSLVGNIYLGVVRRVLPGMQSAFIDIGLERAAFLHIVDVLEQRRNPEETQRIEHM
                     LFEGQSVLVQVIKDPINTKGARLSTQISLAGRFLVHLPQEDHIGVSQRIEDDAERSSL
                     RERLDKLLPENACRGYIIRTNAENATDEQLQSDIDYLTKVWEHIQEQAKIRPPETLLY
                     QDLPLSLRVLRDMVGCDTQKILVDSTVNHGRMTRFAEQYVHGALGRIELFKGERPLFE
                     THNVEQEISRALQPRVNLNFGSYLIIESTEAMTTIDVNTGGFVGARNFDETIFRTNLE
                     ACHTIARELRLRNLGGIIIIDFIDMAQESHREAVLQELAKALAFDRTRVTLHGFTSLG
                     LVELTRKRSRENLNQVLCEPCPSCQGRGRLKTPQTVCYEIQREIVREARRYDAESFRI
                     LAAPNVIDLFLDEESQSLAMLIDFIGKPISLAVETAYTQEQYDIVLM"
     gene            complement(5138..6388)
                     /locus_tag="WIX18_001399"
     CDS             complement(5138..6388)
                     /locus_tag="WIX18_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="HEZ5238497.1"
                     /translation="MFVPLAMLAGMFSYYETFHETEALQDDLLRQAALYVAPDSKPET
                     LPEGDGDTRILVQMPQQEDPVVSLPAHLADGLHTLQADGDDDYYRVYIRTTERGRIAV
                     MQESEYREDLAADAARQSVLPLLAALPLMILLTVWITHKAMRPVRKLSQSLEQRRIND
                     LSALSVDNIPSEIRGFVTAINLLLKRADEDIRHRQRFVADAAHELRTPMTALSLQAER
                     LNNMSLPPDAARQSAVLQQSIRRNKHLLEQLLALARSQSDETPLAKTTFGLQSRFRQV
                     LQELMPLALEKRQDIGVAVGGDVEIFADETEIYTLVKTFVDNAIRYTPSEGRIDLGFT
                     DEGKYLAVWVEDNGNGIPESERVRVLDPFYRILGTEQQGTGLGLSIADTLAKKYGGYL
                     ELTDSRRFGHGLLIRALLDKETLK"
     gene            complement(6401..6558)
                     /locus_tag="WIX18_001400"
                     /pseudo
     CDS             complement(6401..6558)
                     /locus_tag="WIX18_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692565.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding response regulator"
     gene            complement(6781..8094)
                     /locus_tag="WIX18_001401"
     CDS             complement(6781..8094)
                     /locus_tag="WIX18_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CitMHS family transporter"
                     /protein_id="HEZ5238498.1"
                     /translation="MLTFIGLLIIGVIVWLLLTEKVSPIIALILVPLFGALLAGFDVS
                     QLKEFYSGGTKSVMQIVIMFMFSILFFGIMNDVGLFRPMIGGLIKLTRGNIVAVSVGT
                     VLVSVVAQLDGAGATTFLLVVPALLPLYKRLHMNPYLLFLLLTSSAGLINLLPWGGPT
                     GRVASVLGADVGELYKPLLTVQIIGVVFILALSLLLGVREKRRIVRELGALPAVADLI
                     KPVPLSEEEQKLARPKLFWWNVLLFLAAMSLLFSGIFPPGYVFMLAATAALLLNYRSP
                     QEQMERIYAHAGGAVMMASIILAAGTFLGILKGAGMLDAISKDIVHILPDALLPYLHI
                     AIGVLGIPLELVLSTDAYYFGLFPIVEQITSQAGVAPEAAGYAMLIGSIVGTFVTPLS
                     PALWMGLGLAKLSMGKHIRYSFFWAWGLSLAILASSIAAGIVPLP"
BASE COUNT         1978 a         2469 c         2143 g         1799 t
ORIGIN      
        1 aatttaatcc actatagttt atccggcttc agcgatttcc gacacatttc cacacgcttc
       61 aatttcgtca tttctccggt ttcagtcatt gccgataaca ccgtggtttt tcatttctag
      121 attcccgcct gcgcgggaat gacggcggag ggcttgccgt ttttcccggt aaatacctgc
      181 aatttaaaat cccatcattg ccgtgaaaac aaaccaaaaa cctaaaatcc cgtcattccc
      241 gcaaaagcgg gaatctagtt tatccggctt cagcgatttc cgacacattt ccacacgctt
      301 cgattccgtc atttctccgg tttcaatcat ttccgataac accgtggttt ttcatttcta
      361 gattcccgcc tgcgcgggaa tgacggcgga gggcttgccg ttttcccgat aagtctctgc
      421 ggcttcccat tgccggattt ccgcccactt gggaataacg agatttaaaa tcatgaaaat
      481 gtgtcaaaaa taatgcaaaa tcagattccg ttgcactttt ttccaatatt tccggcgaca
      541 tttcgctcac acgcccaaat aaccttccct gccggaaagc catcgtgcca aatgcgcttc
      601 gacgatttcg gggttttgtt caatcagtat cggggcgatt tcgcgcgctt gttccaaaag
      661 gtgtaagtct tcttcgagct tggcgaaacg cagcataggc acgccgcttt gacgcgcgcc
      721 gagaaattcg ccggggccgc ggatgttgag gtcttggcgg gcgatttcaa agccgtcggt
      781 gtgttcgtag atgactttca gccgcgcttt ggcgagttcg cccaagggtt cggcaaacag
      841 gaggacgcac acgctttctg ccgcgccgcg cccgacccga ccgcgtaatt ggtgcagctg
      901 cgccaagccc atgcgctcgg cgtgttcgat gaccatcagg gcggcattgg gcacatctac
      961 gccgacttcg ataacggtgg tggcgaccaa gacgttcagc tcccccgaag aaaaccgtgc
     1021 catcacttcg gccttttcgg cggccttcat gcgcccgtgt accagtccga tattcagctc
     1081 gggcaatgcc gtctgaagcc gggcgagggt ttcggcggcg gtttgcagtt gcagggtttc
     1141 gctttcttca atcaatgggc agacccaata cgcctgccgc ccttttcggc aagtattgag
     1201 gacgaagcct tcgacttcgg cgcggcggac gttgttgacg aggcgcgttt taatcggggt
     1261 gcgcccgggc ggcagtttgt cgatgacgga cacgtccaaa tcggcgaaaa aactcatcgc
     1321 aagcgtgcgc gggatgggcg tggcggacat catcaactga tggacttcgc gccctttgtt
     1381 tttaagggcg aggcgttggg caacgccgaa acggtgctgt tcgtccacga tggtcaggcc
     1441 caaattgtga aacgtcacgc cgtctgaaaa cagggcgtgc gtgccgatgg cgattttgac
     1501 gctgccgtcg gcgagtttgg ctttggcttc gtctttggct tttttacgca aactgccaaa
     1561 aaggcggaca acttcaatgc ccaaaggttc gagccattgt ttaaatttaa taaaatgttg
     1621 ttcggcaagg atttcagtgg gcgccattac agccacctgc gcaccggatt cgatggcggt
     1681 cagcgcggac aaggcggcga caatggtttt gccgctgccg acatcgccct gcagcaggcg
     1741 gtgcatcggg taggtttgcg ccatatcgcg gcagatttcg gaaacaactt tttcttgcgc
     1801 atcggtcagg gcaaacggca gggcttggcg cagggcttgg gtcaatgtgc cgtcgccgcc
     1861 caatgccgcc gccgtgccgc cgatacgctt ctgtcgcgcc aagcgcatcg aaagctgttg
     1921 cgccaaaagt tcatcgaatt tgagccgttg ccatgcaggc agcgtgccgt ctgaaagctg
     1981 atgaatcgtg aaactcggcg gcggcgaatg caaaagacgc aggctttcgg cgaggtgtgg
     2041 cagcttcaga cggcacagca gggcatcggg cagcgtgtcg tgcagcggcg taacgtccaa
     2101 cgccgtctga ataatacggc gcaaagtggg ctggttcaaa ccgtttacgg tcgggtaaac
     2161 cggcgtgagg ctttccgcca aaccgccgcc ctcggcatcg cgaattttgg gatgaatcat
     2221 ctcgtcgccg taaaagccgt gtttgatttc gcccacggcg cggatgcgtt tgccgaccgc
     2281 cgtctgtttc tgatggctgg cgtaaaagtg gatgaagcgc agaaaaagga cgctgccgga
     2341 accgtcggcg atttggacaa tcaactgctt gcgcggtttg aacgttactt cctgatggat
     2401 aacctcgccc tcgacctggc acggcacgcc aatcggcgcg tccttaatcg gcataatgtg
     2461 cgtctcgtcc tcgtaacgca gcggcaggtg caacaccaaa tcccacgcgg tatggaggtt
     2521 gagtttgtcg agcttcttgg cggaaacatc ggtgattttg agctgtttct gggtttcggg
     2581 cgacatcata ggcagattcc tttgaacgca cctattttat ccgaaaacaa aaataccgtc
     2641 tgaaacggat tcagacggca tcggcaggca ggaatcaagc cccggcggct tcggcttcct
     2701 gctgttgttg gtaaatcgcc tcaaaattaa tcggcgcgag caggacgggc gggaagccgg
     2761 cacgtgttac cgtaccggaa acggcttcgc gcgcgtaagg gaagaggatg ttcggacacg
     2821 ccacgcccag cagcagctgc acatcttctt cggggatgtt ttccaaacgg aagatgccac
     2881 tttgggttac ttcgttcaaa aacatcgtgc gctcgttatc cagcttggcg gtaacggtta
     2941 cggtaacgtc cacgttgtag tagccgtctt ccagcttttg gctgccggtg gaaacgcgca
     3001 tatccacttc aggctcgccc tgttccaaaa agatttgcgg cgcgtgcggc acttccaaag
     3061 acaagtcttt gacatacagt cgctcgatgc tgaatacggg ttgcagttct tcgctcattt
     3121 tgttttccta gttgggggtt aagggttcag cagtccgtcc agcccgcctt cctgctggag
     3181 gcggtagagg tcggtaaatc cgccgacgtg cgtttcgccg atgaaaatct gcggcacgct
     3241 gcgctgtccc gaaagctgct gcatttcggc aaaggcttcg gggcttgcat cgacacggat
     3301 ttcgtcgata tgtccgacac ctgccgtgtg cagcagcctt ttcgccatcg cgcagtaggg
     3361 acaaaacgga cctgtgtaca tggtaacggt ctgcatattg ggtttccgaa agttttgcaa
     3421 tgataatcaa tataggggca tttcccctgt ttggcaagtg cggaacagat gcacgttcaa
     3481 acggcatgtg cggaatgtgt caaagtttct tttttaaagt atgataggca ttgtgaaaaa
     3541 tatttttgca cccgcgctgc gcggcggaac gggtgcaaaa atatttttat tacattttca
     3601 ggaaaaacca tgttgtcagg actccccatc cccaaagaca tcgcgcgccc gcccgaaacg
     3661 atattggtca acatcacgcc gcaggaaacg cgcgtagcgg tgttggagga aaacaatatc
     3721 tgcgagctgc acatcgagcg caacagcgaa cacagcctgg tcggcaatat ctatctgggc
     3781 gtggtgcgcc gcgtgctgcc cgggatgcag agcgcgttta tcgacatcgg cttggaacgc
     3841 gcggcgtttt tacacatcgt cgatgtcctc gaacaacgcc gcaaccccga agaaacccag
     3901 cgcatcgaac atatgctgtt tgaagggcag tctgttttgg tgcaggtcat caaagacccg
     3961 atcaacacca aaggcgcgcg gctttccacc caaatctcgc tggcggggcg tttcctcgtc
     4021 catcttccgc aagaagacca catcggcgtg tcccaacgca tcgaagacga tgccgaacgc
     4081 agcagcctgc gcgaacgcct cgacaagctc ctgccggaaa atgcctgccg gggctacatc
     4141 atccgcacca acgccgaaaa cgccaccgac gaacagctcc agtccgacat cgactacctg
     4201 accaaagtgt gggaacacat ccaagaacag gcgaaaatcc ggccgccgga aaccctgctt
     4261 tatcaggatt tgcccttgag tttgcgcgta ttgcgcgata tggtcggctg cgacacgcaa
     4321 aaaatcctcg tcgattccac cgtaaaccac gggcgcatga cgcgttttgc cgaacaatac
     4381 gtccacggcg cattgggcag gatagaattg ttcaaaggcg aacgcccgct gtttgaaacc
     4441 cacaacgtcg aacaggaaat cagccgcgcc ctgcaaccgc gcgtcaacct caacttcggc
     4501 agctacctga ttatcgaatc caccgaagcc atgaccacga tagacgtgaa caccggcggc
     4561 ttcgtcggcg cacgcaactt cgacgaaacc atcttccgca ccaacctcga agcctgccac
     4621 accatcgccc gcgaattgag gctacgcaac ctcggcggca tcatcatcat cgacttcatc
     4681 gatatggcgc aggaaagcca ccgcgaagcc gtgttgcagg agcttgccaa agccctcgcc
     4741 ttcgaccgta cccgcgttac cctgcacggt tttaccagcc tggggctggt cgagctgacg
     4801 cgcaaacgct cgcgcgaaaa cttaaaccaa gtcctctgcg aaccctgccc ttcctgccaa
     4861 ggcagaggcc gtctgaaaac gccgcaaacc gtgtgctacg aaatccagcg cgaaatcgtc
     4921 cgcgaagcgc gccgttacga tgccgaaagt ttccgcatcc tcgccgcccc caacgtcatc
     4981 gatttgtttt tggacgaaga atcgcaatcc ttggcaatgc tgatagattt catcggcaaa
     5041 ccgatttctc tggcggtcga aaccgcttac acgcaggaac aatacgatat tgtgctgatg
     5101 taaaaaatgc cgtctgaagc cttcagacgg catctgtcta tttcagggtt tccttgtcca
     5161 acaaggcgcg tatcagcaga ccgtgtccga acctgcggct gtcggtcagt tccaaatatc
     5221 cgccgtattt tttggctagc gtgtcggcaa tcgacagccc cagccccgtc ccctgctgct
     5281 ccgttcccaa aatacggtaa aacggatcga ggacgcggac gcgttcggat tccggaatgc
     5341 cgttcccgtt atcttccacc cacacggcaa gatatttccc ttcgtctgtg aaacccaaat
     5401 ctatcctgcc ttcggacggg gtataacgta ttgcgttatc aacaaacgtt ttaaccaagg
     5461 tatagatttc agtttcatcg gcaaatattt cgacatcacc tccgaccgcc acaccaatgt
     5521 cctgacgttt ttccaaggca agcggcatca gttcctgcaa cacttggcgg aaacggcttt
     5581 gcagaccgaa tgtcgttttc gccaaagggg tttcgtccga ctgcgaacgc gccagtgcca
     5641 aaagctgctc gagcaggtgt ttgttgcgcc gtatgctttg ctgcaaaacg gcagactgcc
     5701 gcgccgcatc gggtggcaga gacatattgt tgagccgttc cgcctgaagg gaaagggctg
     5761 tcatcggcgt acgcaattcg tgtgccgcgt cggcgacaaa ccgctgacgg tggcggatgt
     5821 cttcatccgc acgtttcaaa agcaagttga tggcggttac gaaccctctg atttcactgg
     5881 gaatattgtc cacactcaag gcagacaggt cattgattcg gcgttgttcg agactttgcg
     5941 acaatttgcg gacggggcgc atggctttgt gcgtaatcca cacggtcagc agtatcatca
     6001 gcggcagtgc cgccagcagg ggcaacacgc tttgccgtgc cgcatccgcc gccaaatctt
     6061 cccggtattc gctttcctgc atcacggcaa tccgcccccg ctccgtcgtg cggatataga
     6121 cgcggtaata atcgtcgtcc ccgtccgcct gaagcgtgtg cagaccgtcc gccagatgcg
     6181 caggcaggct gacaacaggg tcttcctgct gcggcatctg taccaaaata cgcgtatcgc
     6241 cgtcgccctc gggcaaagtt tcgggtttgg aatcgggggc gacgtacaat gccgcctgac
     6301 ggagcaggtc gtcctgcaac gcttccgttt cgtggaaggt ttcgtagtag gaaaacatac
     6361 ctgcaagcat tgccagcgga acaaacatcc aaaccgtccg ccccggcaaa cccaaatcca
     6421 gcagcatcaa gtcataaggc tgggcagcgg cagccgcgcg ccgtttttga cccaatccac
     6481 cgcatagccg ccgtctttca aacttgccga caccgcctcc gcaatcatcg catcgtcttc
     6541 caccagcaaa acacgcatca actttccctt tcagacaaac cgtgcctatt ctaacacccc
     6601 aaaattagcc gcaatttagc ggcctttacg cttgccggta tttttcaaaa ctgcagcaca
     6661 aaaaaaccgc gccggcaact gccttcagac ggcattgggg cgcgattgca acacacgggc
     6721 aggcaggcag agcctgcgac agaccacagg aacgattcgg gcttcagacg gcttcgccgt
     6781 ttacggcaga ggcacgattc ctgccgctat cgaactggcc aatatcgcca gcgacaaacc
     6841 ccacgcccaa aaaaacgaat aacggatgtg tttgcccatc gacaatttcg ccaaacccaa
     6901 gcccatccac aaagccggcg aaagcggcgt aacaaaagtg ccgacgatac tgccgatcaa
     6961 catcgcataa cctgctgctt cgggcgccac gcccgcctgc gaggtaatct gctccacaat
     7021 cggaaacagt ccgaaataat aagcgtccgt actcaaaacc aactcaagcg gaatgcccaa
     7081 cacaccgatg gcaatatgca gataaggcag cagcgcgtct ggcaggatat gcacaatgtc
     7141 tttggaaatc gcgtccaaca tccccgcacc cttcaaaatc cccaaaaacg tacctgccgc
     7201 caaaataatg gacgccatca tcaccgcgcc gccggcgtgg gcataaatcc gctccatctg
     7261 ttcctgcggg ctgcggtaat tcaaaagcaa cgccgccgtt gcagccagca taaatacata
     7321 acccggcggg aagatgcccg aaaaaagcag gctcatcgcc gccaaaaaca gcaggacatt
     7381 ccaccaaaac agtttcggac gcgccaattt ttgttcttct tccgacaaag gcaccggctt
     7441 tatcaaatcc gccacggcgg gcaacgcgcc caactcccgg acaatccgcc ttttttcacg
     7501 cacacccaaa agcagggaca gcgcaaggat aaacactaca ccgataattt gcaccgtcaa
     7561 caaaggttta tacaattcgc ccacatctgc gcccaacacg cttgcaaccc gcccagtcgg
     7621 cccgccccac ggcagaaggt taatcaatcc cgcactggaa gtcagcagca aaaacagcag
     7681 gtaaggattc atatgcagac gcttgtaaag cggcaaaagg gcggggacga ccaataaaaa
     7741 cgtcgtcgca cccgccccgt ccaactgcgc caccaccgac accaagaccg tccccacact
     7801 cactgccacg atattacccc gagtcagctt aatcaaaccg cctatcatcg gacggaacag
     7861 ccccacatcg ttcatgattc caaaaaacaa aatggaaaac ataaacataa tcacaatctg
     7921 catcaccgat ttggtgccgc ccgaataaaa ttcttttaat tgggatacat caaaccccgc
     7981 cagcaacgcc ccaaacagcg gcaccaagat taatgcgatg atgggcgaca ctttttccgt
     8041 cagcagcaac catacgatga ccccgataat cagcagtccg ataaacgtca gcatcatttc
     8101 tcctttattt tattttaaac agaaaaccga ccgtgcaggc aaaaccgtcc acagacgcgg
     8161 aataagccct gcattctact tttttatttt aaaataagtc aatcaatcat ttcctccgcc
     8221 tcccgtctgc cgtcattcct gcatccgtcc gtcatttcac ggcggcaacc gatacggaac
     8281 aaccggtaaa tcggtatcga gacggcgcgg gggcattcat cccggtgcgc cgattcaaac
     8341 gaaaccgccc ctatcattgc ggagcgcggg gcgtgccgta cacgcggga
//
LOCUS       DAWITQ010000085         8171 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.085, whole genome shotgun sequence.
ACCESSION   DAWITQ010000085 DAWITQ010000000
VERSION     DAWITQ010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8171)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8171)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8171
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.085"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(65..1312)
                     /gene="fabF"
                     /locus_tag="WIX18_001402"
     CDS             complement(65..1312)
                     /gene="fabF"
                     /locus_tag="WIX18_001402"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEZ5238499.1"
                     /translation="MSQRRVVITGLGQVSPVGNTVAEAWDTLLTGKSGIGAITRFDAS
                     DINSRVAGEVRGFDIGQYISAKEARRMDVFIHYGIAAALQAIADSGLDDVENLDKDRI
                     GVNIGSGIGGLPGIEVTGKAVIEGGARKINPFFIPGSLINLISGHVTILKGYRGPSYG
                     MVSACTTGAHAIGDSLRMIKYGDADIMVAGGAEGAISTLGVGGFAAMKALSTRNDDPA
                     TASRPWDKGRDGFVIGEGAGILVLEELEHAKKRGAKIYAEIVGFGMSSDAYHITAPNE
                     EGPALAVTRALKDAGINPEDVDYVNAHGTSTPLGDANETKALKRAFGEHAYKTVVSST
                     KSMTGHLLGAAGGVEAVYSILAIHDGKIPPTINIFEQDVEAGCDLDYCANEARDAEID
                     VAISNSFGFGGTNGTLVFKRFKG"
     gene            complement(1468..1704)
                     /gene="acpP"
                     /locus_tag="WIX18_001403"
     CDS             complement(1468..1704)
                     /gene="acpP"
                     /locus_tag="WIX18_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEZ5238500.1"
                     /translation="MSNIEQQVKKIVAEQLGVNEADVKNESSFQDDLGADSLDTVELV
                     MALEEAFGCEIPDEDAEKITTVQLAIDYINAHNG"
     gene            1936..2943
                     /locus_tag="WIX18_001404"
     CDS             1936..2943
                     /locus_tag="WIX18_001404"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HEZ5238501.1"
                     /translation="MYPLARRILFALDAEKAHHFTLDALYTVYKLGLIPVTGNRTKPV
                     KLMGMDLPNPVGLAAGLDKNGEYIDALGALGFGFIEIGTVTPKPQPGNPQPRLFRVPE
                     HQGIINRMGFNNHGIDTMIRNIEKSKFSGVLGINIGKNAVTPIENAADDYLICLEKAY
                     AHASYITVNISSPNTKNLRALQGGDELSALLEALKNKQAQLASVYGKYVPLAVKIAPD
                     LDEAQIEDIAHVVKSVEMDGIIATNTTIDKSSLGSHPLAGEQGGLSGRPVHEKSNRVL
                     KLLADHIDGKLPIIGVGGIMEGRDAADKIRLGATAVQVYSGLIYKGPALVKECLKALA
                     R"
     gene            3276..3599
                     /locus_tag="WIX18_001405"
     CDS             3276..3599
                     /locus_tag="WIX18_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238502.1"
                     /translation="MFKDELNEFIRLISDPESELDEWYLSDFKDEHIWEMQSYEAFSC
                     LREAVPYLFAYPRYGYELLEIISALKETSDTTELFYEPGIVPLLIDLYKEDSYLVNMV
                     KRIFK"
     gene            3686..3967
                     /locus_tag="WIX18_001406"
     CDS             3686..3967
                     /locus_tag="WIX18_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238503.1"
                     /translation="MENGQRNNRFPLEKRIFYLEHSGRYLMICALSDYSQNKHTVVMA
                     NFIYPDEKTDWRNLDDLFNELVLEELQASFMDWHPTVEEAISRHLEDFS"
     gene            4020..4493
                     /locus_tag="WIX18_001407"
     CDS             4020..4493
                     /locus_tag="WIX18_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2247 family protein"
                     /protein_id="HEZ5238504.1"
                     /translation="MNLDLTAQKVRLSWKDILWGYGNKYLGWADVAAYARKMTLSDHD
                     ERVFKLSLINKSNILELKPVLEDLASEMRDYSPKNWLYVLLSDVFHRKEEFEDPLGEV
                     EKIYADFDYPEEIESFVRYMPPKDGYIPSAHTYEENIARLYSHWEHYLNNGGGQG"
     gene            4747..5082
                     /locus_tag="WIX18_001408"
     CDS             4747..5082
                     /locus_tag="WIX18_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238505.1"
                     /translation="MTVDKEQVEKMIYSENKQSVIDGMLGMTFSSEEDEIPWISEKLT
                     ELSKHKDLDIARLSLTCFGHLARMHENIGDCDKVIALLLSKQGDPDFQGFAEDALDEI
                     SLFIFKKRP"
     gene            5262..7952
                     /gene="glnE"
                     /locus_tag="WIX18_001409"
     CDS             5262..7952
                     /gene="glnE"
                     /locus_tag="WIX18_001409"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HEZ5238506.1"
                     /translation="MSDNRLDTARRHSLFLARQLDNGKLKPEIFLPMLDKVLTEADFQ
                     AFADWDKIRAEENEEELARQLRGLRRYVVSQIIVRDINRISDLNEVTRTITLFADFAV
                     NTALDFSYAYYQDMYGTPIGRYTKSPQHLSVVAMGKAGGYELNVSSDIDLIFIYPESG
                     DTDGRRERGNQEFFTKVGQKLIALLNDITADGQVFRVDMRLRPDGDSGALVLSETALE
                     QYLITQGREWERYAWCKGRVVTPYPNDIKSLVRPFVFRKYLDYGAYEAMRKLHRQIHS
                     EVGKKGMADNIKLGAGGIREVEFIAQIFQMIRGGQMRALQLKGTRETLEKLAESGIMP
                     SENVETLLAAYRFLRDVEHRLQYWDDRQTQTLPASPEQRQLLAESMGFDDYADFLNAL
                     NQHRNQVNRLFNEILSEPEEQTQSNSEWQWVWQDKPDEEERQGRLKEHGFDAETIATR
                     LDQIRHSHKYRHLSAHAQPRFDAVVPLFVQAAAAQSNPTDTLMRLLDFLENISRRSAY
                     LAFLNEHPQTLAQLAQIMGQSSWVAAYLNKYPILLDELISAQLLDTAFDWQALAAALS
                     DDLKACGGDTEAQMDTLRHFQHAQVFRLAVQDLAGLWTVESLSDQLSALADTILAAAL
                     LCAWADMPKKHRDTPQFAVVGYGKLGGKELGYASDLDLVYLYDDPHPEAGDVYSRLAR
                     RLTNWLSTATGAGSLYETDLRLRPNGDAGFLAHSIAAFEKYQRENAWTWEHQSLTRAR
                     FICGTPEIQTAFDRIRTEILTAERDQTALADEIIEMREKMFPTHPPADSNVKYARGGV
                     VDVEFIVQYLILAHARKYPQLLDNYGNIALLNIATDCGLIDKTLAEQSRTAYRFYRRQ
                     QHNTKLRDAEKTEVSGELLAHYGNVRKLWREVFGEEAATA"
BASE COUNT         2044 a         2075 c         2153 g         1899 t
ORIGIN      
        1 ctataaaaat gccgtctgaa acggtttcag acggcatttc gatgtcggcg gcggctttgc
       61 ggaatcagcc tttgaagcgt ttgaagacca gcgtgccgtt ggtgccgccg aagccgaagg
      121 agttggaaat ggcaacgtcg atttccgcgt cgcgcgcttc gttggcgcag tagtccaaat
      181 cgcagccggc ttcaacgtct tgttcaaaaa tgttgatggt cggcgggatt ttgccgtcgt
      241 gtatcgccaa aatgctgtac acggcctcca cgccgcccgc cgcgccgagc aggtggccgg
      301 tcatggattt ggtcgagctg acgacggttt tgtaggcgtg ttcgccgaac gcgcgtttga
      361 gggctttggt ttcgttggca tcgcccaagg gggtggacgt gccgtgcgcg ttgacgtaat
      421 ccacgtcttc gggattgatg ccggcatctt tcagcgcgcg ggtaacggca agggcggggc
      481 cttcttcgtt cggcgcggtg atatggtaag catcggaact catgccgaag ccgacgattt
      541 cggcgtagat tttcgcgccg cgttttttgg cgtgttccaa ttcttccaac accaatatgc
      601 ccgcgccttc gccgataacg aagccgtcgc ggcctttgtc ccacggacgg gaagcggtgg
      661 cggggtcgtc gttgcgggtg gagagggctt tcatcgcggc aaaaccgccc acgcccaaag
      721 tgctgattgc gccttccgcg ccgccggcaa ccattatgtc cgcgtcgccg tatttaatca
      781 tacggaggga atcgccgatg gcgtgcgcgc cggtggtgca ggcggaaacc atcccgtagc
      841 tcgggccgcg gtagcctttg aggatggtaa cgtgtccgga aatcagatta atcagagaac
      901 cggggataaa gaaagggttg attttgcgcg cgccgccttc gattacggct ttgccggtga
      961 cctcgatgcc gggcagtccg ccgatgccgg aaccgatgtt cacgccgatg cggtctttgt
     1021 cgaggttttc cacatcgtcc aaacccgaat cggcgattgc ctgcaatgcg gcggcaatgc
     1081 cgtagtggat gaatacgtcc atccggcgcg cttctttcgc gctgatgtat tgtccgatgt
     1141 cgaaaccgcg cacctcgccg gcgacacggc tgttgatgtc ggatgcgtca aagcgggtaa
     1201 tcgcgccgat gccgcttttg ccggtgagca gggtgtccca agcctctgcg acagtgttgc
     1261 cgacagggga aacctgacct aagcctgtaa tgactactct tctctgactc atgataacct
     1321 cgctgttggt tgtcggaatg ggggcatatg cggctgtcgt gcagatgccg tctgtaattt
     1381 gcggcagggg ttcaaacagt ttgccatata agggaaaagc ctctattgcg cggtgcagca
     1441 gaggctgttg tgtcgggcga cgaccggtta gccgttgtgg gcattgatgt agtcgatagc
     1501 cagttggacg gtggtgattt tttcggcatc ttcgtcgggg atttcgcagc cgaatgcttc
     1561 ttccaaagcc ataaccagct ccacggtgtc caaagaatcc gcgcccaagt cgtcttggaa
     1621 agaagattcg tttttcacgt cggcttcgtt tacgcccagt tgttcagcaa caattttttt
     1681 aacttgttgt tcgatgtttg acatatcagt cgttccttta tgccttgcgg caggttgttt
     1741 aagggaaata aatcggtggt attgtaccga cttttaatag agttttctat ctaatgacta
     1801 ttatatcaat atttgccgat ttgtacattt ttgggtgcgg cgggttttgt cgttcaagtt
     1861 tgacctgtgt gccgtatgtt tgacgggatt tcggttaaaa tgacggcatt tccatctgaa
     1921 gcagaaagcc ctgtcatgta tccacttgcc cgccgcatcc tgtttgcact cgatgccgag
     1981 aaagcccacc acttcacgct cgacgcgctc tacacggttt ataaattggg tctgattccc
     2041 gtaaccggca accgtaccaa acctgtaaaa ttgatgggta tggatttgcc caaccctgtc
     2101 ggacttgccg ctggactcga caaaaacggc gaatacatcg acgcattggg cgcgctcggc
     2161 tttggtttca tcgaaatcgg cacggtaacg cccaaaccgc agcccggcaa cccgcagccg
     2221 cgcctcttcc gcgttcccga acaccaaggc atcatcaacc gcatgggttt caacaaccac
     2281 ggtatcgaca ccatgatacg caacatcgaa aaaagtaaat tcagtggcgt attgggcatc
     2341 aacatcggta aaaacgcggt tacacccatc gaaaacgctg ccgatgatta tttaatctgc
     2401 cttgaaaaag cctacgcaca cgcaagttac attaccgtca acatttcctc gcccaacacc
     2461 aaaaacctcc gcgcgctgca aggtggcgac gagttgagcg cattgcttga ggctttgaaa
     2521 aacaaacagg cacagcttgc ctctgtatac gggaaatacg ttccgctcgc cgtcaaaatc
     2581 gcccccgatt tggatgaagc acaaatcgaa gacatcgccc acgttgtcaa atccgtcgaa
     2641 atggacggca tcatcgctac caataccacc atcgacaaat caagtctcgg cagccatccg
     2701 ctcgcaggcg agcagggcgg tttgagcggg cggcccgttc atgaaaaaag taatcgggtg
     2761 ttgaagctgt tggcagacca catagacggc aagctgccga ttatcggcgt aggcggcatt
     2821 atggaaggca gggacgcggc agataaaatc cgcttgggcg caactgccgt ccaggtgtac
     2881 agcggattga tatacaaagg tccggcattg gtcaaagaat gtttgaaggc tttggcgcga
     2941 tgacgcgatc cgcccaaaat gccgtctgaa cgcacgtttt gccgttcaga cggcattttc
     3001 atttcctttt tccgcctgcc gccccttgaa aatcccttac gcgccgccct gtttgaaaca
     3061 aagcaaacgc ccgccgcgaa ccggacaatc ttgatacgca gccaaagcaa gtccggcggt
     3121 aagttgttaa atatataagc aattgataaa aaaaataatt ttatgccgtg gtggacggtt
     3181 tgagaaaacg caaaatatga acggcgttga aattcatgat gtggaaaata aggatacggc
     3241 ggataatcaa aagattttat atttaaggat ttgatatgtt taaggacgaa ctaaatgaat
     3301 ttatccgatt gatatccgat ccggaaagtg aattggatga atggtatttg agtgatttta
     3361 aagatgaaca tatatgggaa atgcaaagtt acgaagcatt ttcatgtttg cgggaagcag
     3421 tcccctattt gtttgcttat ccccgatacg ggtatgaact gttggagata atttccgcgt
     3481 taaaagaaac atctgatacg acagaattat tttatgagcc gggtatcgtg cctttgctga
     3541 ttgatttata taaagaagat agttatctgg taaatatggt caaacggata ttcaaatgat
     3601 gaaaggggcg cgggcgtttg cttggcggaa ggcaggtaac tcaatttgaa ggacgcggaa
     3661 gccgatacgt taaaaaggat gaaaaatgga aaacgggcaa cggaataacc ggtttccttt
     3721 ggaaaaacga attttttatc tggagcattc ggggcggtat ctgatgattt gcgccttatc
     3781 ggattattcc caaaacaaac atactgtcgt tatggcaaat ttcatctatc cggatgaaaa
     3841 aacggattgg cggaatttgg atgatttatt caatgagttg gttttagagg aattgcaggc
     3901 ttcatttatg gattggcatc cgactgttga agaggcaatc agccgtcatt tggaagactt
     3961 ttcgtaacag gcgtcaatcg gaaggggcgg aatgacgggg caggcaatcg gagtaaaaaa
     4021 tgaaccttga tttaaccgcg caaaaagtcc gtctttcttg gaaggatatt ctgtgggggt
     4081 atgggaataa atacttgggt tgggctgatg tggcagctta tgcccgaaaa atgacgcttt
     4141 cagatcatga tgaacgtgtg ttcaaactat ctttaatcaa caaatccaat attcttgaat
     4201 taaagcctgt tctggaagat ttggcttcgg aaatgaggga ttattcccct aaaaattggc
     4261 tgtacgtcct cttaagcgat gtattccata gaaaagaaga atttgaggat cctttggggg
     4321 aagttgaaaa aatttatgca gattttgatt atccggaaga aatagaatca tttgtcaggt
     4381 atatgccgcc caaagacggt tatattcctt ctgcccacac ctatgaagaa aatattgccc
     4441 ggttatattc tcactgggaa cactatttga acaacggcgg agggcagggt taaaaccggc
     4501 aatccgatgc cgtctgaagc attatccggc cttcagacgg caaacggatt agagcggaag
     4561 atttgaaagc gggggcgggc tgcattccgg aagcggcaaa acccgaaccg cccgcatcgt
     4621 tgccgataaa ccgataagga aatcgttttg ccggaccggg tgcaaatgtt tgataacaat
     4681 cctgccgccc ggcaaaaatg ctttaaagaa agcaggattg gttaatttaa aaggaaaaat
     4741 taaaaaatga cggttgataa ggaacaagta gaaaagatga tttattctga aaataaacag
     4801 agtgttattg acggtatgct cggtatgacc ttcagctcgg aggaggatga aatcccctgg
     4861 atttccgaga agttgacgga gttgtcgaaa cataaagact tggatattgc cagattgtca
     4921 ttaacctgtt tcggacatct cgccaggatg catgaaaata tcggcgattg cgataaagtg
     4981 attgctttat tgctctcaaa acaaggtgat ccggattttc aaggttttgc cgaagatgcg
     5041 ttagacgaga tttctttatt tatatttaaa aagcgtccgt aagcgcggat taaacctgtc
     5101 aatccgatgc cgtctgaagc gttatccggc tttcagacgg catcgaaggt tgctatgata
     5161 tagtggcttg actttaaacc ggtacggcat cccctcgccc tgtcctgatt tgaagtgaat
     5221 ccgccatcat cttcctgcca ttttttcaaa cggaatccga aatgtccgac aaccgcctcg
     5281 acaccgcccg ccgccattcc ctcttcctcg cccgccagct cgacaacggc aaactcaagc
     5341 ccgaaatttt cctgccgatg ttggacaagg tgttgaccga agcggatttc caagcctttg
     5401 ccgactggga caaaatccgt gcggaagaaa acgaggaaga attggcgcgg cagttgcgcg
     5461 ggttgcgccg ttatgtggtg tcgcagatta tcgtgcgcga tatcaaccgc atcagcgatt
     5521 tgaacgaagt aacccgcacg attacgctgt ttgccgattt tgctgtgaat accgcattgg
     5581 atttttcata cgcctattat caggatatgt acggcacgcc gatcgggcgt tataccaaat
     5641 cgccgcagca tttgagcgtg gtggcgatgg gcaaggcggg cggctatgag ttgaacgtgt
     5701 cttccgacat cgatttaatt tttatctacc ccgaatcggg cgataccgac ggtaggcgcg
     5761 aacgcggcaa tcaggaattt ttcaccaaag tcgggcagaa actgattgcg ttgctgaatg
     5821 acattaccgc cgacgggcag gtgttccgcg tcgatatgcg gctgcggccg gacggcgatt
     5881 cgggcgcgct ggtattgagc gaaaccgcgc tggagcaata tttgattacg caggggcgcg
     5941 aatgggaacg ctacgcgtgg tgcaaaggcc gcgtggtcac gccgtatccg aacgacatca
     6001 aatcgctggt gcgccccttc gtgttccgca aatatctgga ttacggcgcg tatgaggcga
     6061 tgcgtaagct gcaccgccaa atccacagcg aagtcggcaa aaaagggatg gcggacaaca
     6121 tcaaactcgg cgcgggcggc atccgcgaag tcgaatttat cgcccagatt ttccagatga
     6181 tacgcggcgg gcaaatgcgc gcgctgcaac tgaaaggcac gcgggaaacg ctggaaaaac
     6241 tcgccgaatc gggcattatg ccgtctgaaa acgtcgaaac cctgcttgcc gcctaccgct
     6301 ttttgcgcga tgtcgaacat cgtttgcaat attgggacga ccggcaaacc caaaccctgc
     6361 cggcttcgcc cgaacagcgg caactgcttg ccgaaagtat gggatttgat gattacgccg
     6421 attttttgaa tgctttaaat caacatcgga accaagtcaa tcggttgttc aacgaaattc
     6481 tgagcgaacc cgaagaacaa acgcaaagca acagcgaatg gcaatgggtt tggcaggaca
     6541 agcccgacga agaagaacgg caaggccgtc tgaaagaaca cgggtttgat gccgaaacca
     6601 ttgccacgcg gctcgaccaa atccgccaca gccataaata ccgccacctc tccgcacacg
     6661 cccagccgcg tttcgatgcg gttgtgccgc tgttcgtaca ggcggcggca gcgcaaagca
     6721 acccgaccga tacattgatg cggctgttgg attttctcga aaacatcagc cgccgatccg
     6781 cctatctcgc cttcctcaac gaacatccgc aaaccttggc gcaactggcg cagattatgg
     6841 gccaaagttc ttgggtggcg gcgtatctga acaaatatcc gattttgttg gacgaactca
     6901 tcagcgcgca gcttttggat accgcgtttg attggcaggc gctcgccgcc gccctttcag
     6961 acgacctcaa agcctgcggc ggcgatactg aagcgcaaat ggacaccctg cgccatttcc
     7021 aacacgccca agtcttccgc ctcgccgttc aagacctcgc cggactgtgg acggtagaat
     7081 ccctctccga ccagctctcc gcccttgccg acaccatcct cgccgccgcc ctgctgtgcg
     7141 cgtgggcgga catgcccaaa aaacaccgcg acaccccgca atttgccgtc gtcggctacg
     7201 gcaagctcgg cggcaaagaa ctcggctacg cctccgacct cgacttggtc tatctttacg
     7261 acgatcccca tcccgaagca ggcgacgtgt acagccgcct cgcccgccgc ctgaccaact
     7321 ggctttccac cgccaccggc gcaggcagcc tctacgaaac cgacctgcgc ctgcgcccca
     7381 acggcgacgc aggtttcctc gcgcacagca tcgccgcctt tgaaaaatac cagcgcgaaa
     7441 acgcgtggac gtgggaacac cagtccctta cccgcgcccg cttcatctgc ggcacacccg
     7501 aaattcagac ggcattcgac cgcatccgca ccgaaatcct taccgccgaa cgcgaccaaa
     7561 ccgccttggc agacgaaatc atcgaaatgc gcgaaaaaat gttccccact catcccccag
     7621 ccgacagcaa cgtcaaatac gcacgcggcg gcgtggttga tgtcgaattt atcgtccaat
     7681 atctgatact tgcccacgcc cgaaaatatc cgcaactctt ggacaactac ggcaacatcg
     7741 ccctcttgaa catcgccacc gactgtggcc tcatcgacaa aacccttgca gaacaaagcc
     7801 gcaccgccta ccgcttctac cgccggcagc aacacaatac caaactgcgc gacgcagaaa
     7861 aaaccgaagt aagcggcgaa ttgctggcac attacggcaa tgtcaggaaa ttgtggcggg
     7921 aagtgttcgg cgaagaagcg gcaaccgcct gaataaaaaa tgccgtctga agcctgacaa
     7981 tctgggtttc agacggtatt ttcgtaccgt gccgttttaa ggttgcggca gagctaaagc
     8041 gatttatcgg gaatggctga aacccaaaaa ccggattcct ctttcgcggg aatgacggga
     8101 tttcaggctt ctgtttttgt gggaatgatg ggatttttta tccaagcaaa aatcaaaaca
     8161 aacaaataag a
//
LOCUS       DAWITQ010000086         8120 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.086, whole genome shotgun sequence.
ACCESSION   DAWITQ010000086 DAWITQ010000000
VERSION     DAWITQ010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8120)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8120)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8120
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.086"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(214..2010)
                     /locus_tag="WIX18_001410"
     CDS             complement(214..2010)
                     /locus_tag="WIX18_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEZ5238507.1"
                     /translation="MNTVSNYLSALREAMKAQGLDALVIPSADPHLSEYLPEHWQARR
                     ELSGFTGSVGTFVVTADEAGVWVDSRYWEQAAKQLAGSGIELQKSGQVPPYNEWLAAN
                     LPENAAVGILSDMVSFTGKRTLAQSLAAKNIRIEHPDGLLDQVWTSRPAIPAETVFVH
                     DPAYVSETAAEKLARVRAVMAEKGADYHLVSSLDDIAWLTNLRGSDVPFNPVFVSFLL
                     IGKDNAVLFTDRCRLNAEAAAALQTAGITVEPYAQVADKLAQIGGALLIEPNKTAVST
                     LVRLPESVRLIEGINPSTLFKSCKSEADIARIREAMEHDGAALCGFFAEFEDIIGNGG
                     SLTEIDVDTMLYRHRSVRPGFISLSFDTIAGFNANGALPHYSATPESHSTISGNGLLL
                     IDSGAQYKGGTTDITRVVPVGTPSAEQKSDNTLVLKAHIALAEAVFPENIPSPLIDAI
                     CRKPLWQAQCDYGHGTGHGVGYFLNVHEGPQRIAFAAPATPETAMKKGMVTSIEPGLY
                     RPGKWGIRIENLAANQAVAAPQETEFGSFLCFETLTLCPIDTRLMDTALMTDGEIDWV
                     NRYHAEVRRRLEPLTEGAAKAWLIKRTEPLAR"
     gene            2468..3721
                     /locus_tag="WIX18_001411"
     CDS             2468..3721
                     /locus_tag="WIX18_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HEZ5238508.1"
                     /translation="MSEQHISTWKSKINALGPGIMMASAAVGGSHLIASTQAGALYGW
                     QIALIIILTNLFKYPFFRFSAHYTLDTGKSLIEGYAEKSRVYLWVFLILCILSATINA
                     GAVAIVTAAIVKMAIPSLMFDAGTVAALIMASCLIILVSGRYRALDRVSKIIIVTLSI
                     ATLAAAGIAMSRGMQMQPDFIEPTPWTLAGLGFLIALMGWMPAPIEISAINSLWVTEK
                     QRINPSEYRDGIFDFNVGYIASAVLALVFLALGAFVQYGNGEAVQMAGGKYIGQLINM
                     YAVTIGGWSRPLVAFIAFACMYGTTITVVDGYARAIAEPVRLLRGKDKTGNAEFFAWN
                     IWVAGSGLAVIFWFDGVMANLLKFAMIAAFVSAPVFAWLNYRLVKGDEKHKLTSGMNA
                     LALAGLIYLTGFTVLFLLNLAGMFK"
     gene            3727..3879
                     /locus_tag="WIX18_001412"
     CDS             3727..3879
                     /locus_tag="WIX18_001412"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238509.1"
                     /translation="MPSETANRFQTALPRLWKKMPTSRKIRANFVIRSGRLKQIAPDL
                     FFRKTL"
     gene            3876..5387
                     /gene="lysS"
                     /locus_tag="WIX18_001413"
     CDS             3876..5387
                     /gene="lysS"
                     /locus_tag="WIX18_001413"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEZ5238510.1"
                     /translation="MSEQNHPQTEPQLDENQIIALRREKLHNIRQQRNAYPNDFKRDS
                     FAADLHTQYGEIGKEELDPQGIPVKIAGRMMLKRQMGKASFATIQDVSGQIQLYLNNK
                     GVSQEVLDDFNHWDLGDIVGAEGTLFKTNHGELTVRVSDIRLLSKSLRPLPDKHKGLS
                     DQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGAT
                     AKPFVTHHNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNEGMSVRHNPEFTM
                     IEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKK
                     YNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCAEGKLWNPTFIIDY
                     PVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGD
                     DEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFPQMRPE"
     gene            complement(5571..5801)
                     /locus_tag="WIX18_001414"
     CDS             complement(5571..5801)
                     /locus_tag="WIX18_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HEZ5238511.1"
                     /translation="MDGWYDFRFQNVVYAPDRSPEISRMLSSILAGYAWDTENPFVAK
                     SEQRLSALSEWVGQLETEYSELNLNRYSVGSP"
     gene            complement(5805..6683)
                     /locus_tag="WIX18_001415"
     CDS             complement(5805..6683)
                     /locus_tag="WIX18_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ5238512.1"
                     /translation="MARRSKTFEEAAAEVEERFGHRGIKLVEFEGTAKPCVINCPKHG
                     NQTCSRYSNMFIGSSWGCPSCGNEQAAKAGIATLRKNHIALEMLKQAVTGMTKQERIT
                     TQAYNEMTKSVAGSNSIVLNDVQGDTTINNHHTHTHNHSDADGKALSMRLTPRPLLSD
                     RQAAAFARTGKLTGSFDLFASVVAPSQYTFAVAMPDTSMSPVIEKGDLLVVEPRMRPA
                     DEDIVLIELSDKRLVVAHLVIDIAGRMLIYQTGRPSEALDLPEGSVILGVVLEVKKRF
                     MSAAQARRRVDSDYRP"
     gene            complement(6713..7840)
                     /locus_tag="WIX18_001416"
     CDS             complement(6713..7840)
                     /locus_tag="WIX18_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEZ5238513.1"
                     /translation="MSNWKPDIPYNDLPPLPPKQDIESKTILKRCITARASLARLKQA
                     AELIPNQAMLINTLPVMEARASSEIENIVTTTDKLFQSLQMDTERQDPATKEALQYRT
                     ALFAGYESLTSRPLCTQTAIMVCNAIKHPYEMAIRKTGGTALKGGNSGNVVYTPPEGE
                     ETIRGKLANWERFIHESGDLDPLIIMAAAHYQFEAIHPFTDGNGRTGRILNSLLLIEK
                     GLLDLPILYLSRYIIENRADYYRLLLGVTERQDWESWIIYILDGVADTADWTVAKIDA
                     IRRLFEQTRQHIRTHAQGIYTHELVNLLFEQPYTRIANLEAAGIAKRQTASKYLKELS
                     DIGVLQEIAIGRDKLFIHPRLMELLRGEGNSFTSFQSLVKA"
BASE COUNT         1791 a         2041 c         2250 g         2038 t
ORIGIN      
        1 cgcgccttag ctcaaagaga acgattctct caggtgctga agcaccgagt gaatcggttc
       61 cgtactattc gtactgtctg cggcttcgcc gccttgtcct gatttttgtt aatccactat
      121 atttgcttgc ggcaagatga aaacggtgcg ggatgtttta ggaaaccaat gccgtctgaa
      181 ggctttcaga cggcattttt tgcgccgtgc tgtttaacgc gccagcggtt cggtgcgttt
      241 gatcagccac gcttttgccg cgccttcggt cagcggctcg aggcggcggc ggacttcggc
      301 gtggtagcgg ttgacccagt cgatttcgcc gtcggtcatg agggcggtgt ccatcaggcg
      361 tgtatcgatg gggcagaggg tcagggtttc aaaacagagg aagctgccga attcggtttc
      421 ttgaggggcg gcgacggctt ggttggcggc aaggttttca atgcggatgc cccattttcc
      481 cgggcggtag agtccgggtt cgatggaggt aaccatgcct tttttcatgg cggtttcggg
      541 cgtggcgggg gcggcgaagg cgatgcgctg cgggccttcg tggacgttga ggaaatagcc
      601 tacgccgtgt ccggtgccgt ggccgtagtc gcattgcgcc tgccacaggg gtttgcggca
      661 aatcgcatca atcagcggcg aggggatgtt ttcggggaat acggcttcgg caagcgcgat
      721 atgggctttg agaacgaggg tgttgtcgct tttttgttcg gcactcggcg tgccgacagg
      781 gacgacgcgg gtgatgtcgg tcgtgccgcc tttgtattgc gcgccggagt cgatgagcaa
      841 aagcccgttg ccgctgatgg tgctgtggct ttcgggcgtt gcgctgtaat gcggcagtgc
      901 gccgttggcg ttgaagcctg cgatggtgtc gaaactcaat gaaatgaagc ctgggcgcac
      961 gctgcggtgg cgataaagca tggtgtccac gtcgatttcg gtcaggctgc cgccgttgcc
     1021 gatgatgtct tcaaactcgg cgaagaaacc gcacaacgcc gcgccgtcgt gttccatcgc
     1081 ttcgcggatg cgggcgatgt cggcttcgga tttgcaggat ttgaacagcg tggatgggtt
     1141 gattccctcg ataaggcgca cgctttcggg caggcgcaca agcgtgctga cggcggtttt
     1201 gttcggttcg ataagcagcg cgccgccgat ttgcgcgagt ttgtcggcaa cttgggcata
     1261 aggttcgacc gtgatgcctg cggtttgcag cgcggcggcg gcttcggcgt tcagacggca
     1321 tcggtcggta aacaggacgg cgttgtcttt gccaatcagc aggaaggaca cgaaaacagg
     1381 gttgaaaggt acgtcgctgc cacgcaggtt ggtcagccag gcgatgtcgt cgagcgagga
     1441 aaccaagtgg taatccgcgc ctttttccgc catcacggcg cgcacgcggg cgagtttttc
     1501 ggcggcggtt tcggagacgt aggcggggtc gtggacgaac acggtttcgg caggaatggc
     1561 cgggcggctt gtccacactt ggtcaagcag gccgtcgggg tgttcgatgc ggatgttttt
     1621 ggcggcgagc gattgcgcta aagtgcgttt gccggtgaac gagaccatat cggaaaggat
     1681 gccgacggcg gcgttttcgg gcaggtttgc cgcgagccat tcgttatacg gcggcacttg
     1741 cccgcttttt tgcagttcga tgccgctgcc cgcaagctgc ttggcggctt gttcccaata
     1801 gcggctgtcc acccatacgc ccgcttcgtc ggcggtaacg acgaatgtgc cgaccgagcc
     1861 ggtaaagccc gacaattcgc gccgcgcctg ccaatgttcg ggcaggtatt cggacaggtg
     1921 ggggtcggcg gaagggatga cgagtgcatc caagccttgc gccttcatgg cttcgcgcaa
     1981 tgcggacagg taattcgata cggtattcat aataattcct ccaatcgggt tttgcggctt
     2041 cagacggcat ggacggaaat ctgaaatgcc gtctgaaaaa cataaccatc ttatcaaatc
     2101 gccagcctgc tgcaaaacgg acgggctgat cggatggtgc gtgtttgcgc gaaaaaagcg
     2161 atgtaaggtt gtttgttgta aaattttagg cataaaatgt cgtttcatgc ctttttttgg
     2221 aagtaatacg gaaaatatag tcaagtttga gcatgaagtt ctaatagtgt gtgttggcag
     2281 gtatttggat tacgttacaa tacgcgcttt catcaaaatt tccctaccgg gcggtatcct
     2341 gtttttgaag acggtaggat ttgggtttgt ttgggggcaa tcccgcccaa attggagcaa
     2401 tagatagggc tgtgtccgaa tatgcggctc tgtgtgttga aacacggtta aaaatacgga
     2461 agactttatg tccgaacaac atatttcgac ttggaaaagt aaaatcaacg cattgggacc
     2521 agggattatg atggcttcgg cggcggtcgg cggttcgcac ctgattgcct cgacgcaggc
     2581 gggcgcgctt tacggctggc agatcgcgct catcatcatc ctgaccaacc tcttcaaata
     2641 cccgtttttc cgcttcagcg cgcattacac gctggacacg ggcaagagcc tgattgaagg
     2701 ttatgccgag aaaagccgcg tttatttgtg ggtattcctg attttgtgca tcctctccgc
     2761 cacgattaac gcgggcgcgg tcgccattgt caccgccgcc atcgtcaaaa tggcgattcc
     2821 ctcgctgatg tttgatgccg gcacggttgc cgccttgatt atggcatcct gcctgattat
     2881 tttggtgagc ggacgttacc gcgctttgga tcgcgtttcc aaaatcatca tcgttacttt
     2941 gagtatcgcc acgcttgccg ccgccggcat cgctatgtcg cgcggtatgc agatgcagcc
     3001 ggactttatc gagccgacac cgtggacgct tgccggtttg ggcttcctga tcgcgctgat
     3061 gggctggatg cctgcgccga ttgaaatttc cgccatcaat tctttgtggg taaccgaaaa
     3121 acaacgcatc aatccttccg aataccgcga cgggattttt gatttcaacg tcggttatat
     3181 cgccagtgcg gttttggctt tggttttcct tgcactgggt gcgtttgtgc aatacggcaa
     3241 cggcgaagca gtgcagatgg cgggcggcaa atatatcggg caattgatca atatgtacgc
     3301 cgttaccatc ggcggctggt cgcgcccgct ggtggcgttt atcgcgtttg cctgtatgta
     3361 cggcacgacg attaccgttg tggacggcta tgcccgtgcc attgccgaac ccgtgcgcct
     3421 gctgcgcgga aaagacaaaa cgggcaacgc cgaattcttt gcctggaata tttgggtggc
     3481 gggcagcggt ttggcggtga ttttttggtt tgacggcgta atggcgaatc tgctcaaatt
     3541 tgcgatgatt gctgcttttg tgtccgcccc tgtgtttgcc tggctgaatt accgtttggt
     3601 caaaggtgat gaaaaacaca aactcacatc aggtatgaat gcccttgcat tggcaggctt
     3661 gatttatctg accggtttta ccgttttgtt cttattgaat ttggcgggaa tgttcaaatg
     3721 ataacgatgc cgtctgaaac cgcaaaccgc tttcagacgg cattgccgcg tttatggaaa
     3781 aaaatgccga catcgcgtaa aatacgcgca aattttgtga ttcggtcagg tcgtctgaaa
     3841 cagattgcgc ctgatttatt ttttcggaaa accctatgag cgaacaaaac catccgcaaa
     3901 ccgagccgca gttggacgaa aaccaaatca tcgccctgcg ccgcgaaaaa ctgcacaaca
     3961 tccgccaaca gcgcaacgcc taccctaacg atttcaaacg cgacagcttt gccgccgacc
     4021 tgcataccca atacggtgaa atcggcaaag aagaactcga cccacaaggc attcccgtca
     4081 aaattgccgg ccgcatgatg ctcaaacggc aaatgggcaa ggcgagtttt gccaccattc
     4141 aagacgtgtc cgggcaaatc cagctttatc tgaacaacaa aggcgtgagc caagaagttt
     4201 tggacgactt caaccattgg gatttgggcg acatcgtcgg cgcggaaggc actttgttca
     4261 aaaccaacca cggcgaactg accgtacgcg tgtccgacat ccgcctgttg tccaaatcct
     4321 tgcgtccgct gccggacaaa cacaaaggct tgagcgatca ggaaaccaaa taccgccaac
     4381 gctatgtcga tttgattgcc aacgaagaat cgcgcaatac ctttatcaaa cgcagccaaa
     4441 tcatccaatc cgtgcgtaat tttatggtgg gcgagcatta tctcgaagtc gaaaccccga
     4501 tgatgcaccc gattcccggc ggcgcgacgg caaaaccctt cgttactcat cacaatgcct
     4561 tagatattcc gctttacctg cgtatcgcgc ctgagctgta tttgaaacgc ctggttgtcg
     4621 gcggcttgga acgcgtgttt gaaatcaacc gcagcttccg caacgaaggc atgtccgtgc
     4681 gccacaaccc cgaatttacg atgattgaat tttacgaagc cttctccgac tacgaacgta
     4741 tgatgcagat ggcggaagac atcatccgca acgcatcgcg cacagtaaac ggtacggcaa
     4801 acatcactta caatggcaaa gaagtcgatt tggaaagccc gttcgagcgt ctgaccatcc
     4861 tcgaagccat caaaaaatac aatccgcact acaccgacga gcagttgaac gatgcggaat
     4921 ggctgaaaaa agaaatcgtc aaacacggtg aaagcctgcc gccgtccccg ggcatcggca
     4981 gcctgcaact cgcgctgttt gaaggttgcg ccgagggcaa gctgtggaac ccgactttca
     5041 tcatcgatta cccggtcgaa gtttccccgt tggcgcgcgc ttcggatacc aaacaaggtc
     5101 tgaccgaacg tttcgaattg ttcgttgtcg gccgcgaact ggcaaacggc tattcagaat
     5161 tgaatgaccc tgaagaccaa gccgaacgct tcaaatcgca agtcgcacaa aaagacgcgg
     5221 gcgacgacga agccatgcat tacgatgccg actacatccg cgcgatggag ttcggtctgc
     5281 cgccgacagg cggttgcggc atcggtatcg accgcttagt gatgctgctg accgattcgc
     5341 aaaccatccg cgatgtgatt ctgtttccgc agatgcgccc cgagtaatca taaaaacagt
     5401 tgaaatggca atgccgtctg aacctgattg gattcagacg gcattttgta tggcaggatt
     5461 gatagtgaat taacaaaaat caggacaagg cggcgagccg cagacagtac aaatagtacg
     5521 gaaccaattc acttggtgct tcagcacctt agagaatcgt tctctttgag ctaaggcgag
     5581 ccaacgctgt accggtttaa atttaattca ctatattcgg tttccaactg accgacccat
     5641 tctgacaagg ccgacaggcg ttgttcggat ttcgccacga acgggttttc ggtatcccac
     5701 gcgtagcctg ccaaaatcga agaaagcata cggctgattt ccgggctgcg gtcgggcgcg
     5761 tacacgacgt tttggaagcg gaaatcgtac caaccgtcca cacatcaggg gcggtaatcc
     5821 gaatcaacac gccttcttgc ctgtgcggcg gacataaacc gttttttgac ctccagcacc
     5881 acacctaaaa tcacgctgcc ttcgggcagg tcgagggctt cagacggcct gcccgtctga
     5941 taaatcagca tcctgcccgc aatatcgata acaaggtgcg cgacgaccag ccgcttgtcg
     6001 gacagttcaa tcagtacgat gtcttcgtcc gcagggcgca tacgcggctc gaccaccagc
     6061 aaatccccct tttcgataac cggcgacatg gacgtgtcgg gcatggcaac ggcaaacgtg
     6121 tactgcgagg gggcgaccac cgaagcaaac aagtcgaaac tgcctgtgag tttgcctgta
     6181 cgggcgaaag ccgccgcctg acggtctgac aacagggggc gtggtgtgag cctcatcgac
     6241 agtgctttgc cgtcggcatc gctgtggttg tgcgtatgcg tatgatggtt gttgatggtc
     6301 gtatcgcctt ggacatcgtt aaggactatg ctgtttgaac ctgccacgga tttggtcatc
     6361 tcattgtagg cttgcgtcgt gatgcgctct tgcttggtca tacctgttac agcctgtttc
     6421 agcatttcta acgctatgtg attcttccta agggtcgcta taccggcttt tgcagcttgc
     6481 tcattaccac aagaggggca accccagcta cttcctatga acatattgga gtacctcgaa
     6541 caggtttggt ttccatgttt agggcagttg attacacacg gcttggctgt accctcaaac
     6601 tcgaccaact taatgccacg atgaccgaaa cgttcctcaa cctcagcagc agcttcttca
     6661 aatgtttttg accttcttgc catattgacc tccggattat tgattatttt ggctatgctt
     6721 taacgaggga ttggaatgag gtaaagctgt tgccctctcc ccgcaatagt tccattaggc
     6781 gcggatgaat gaatagtttg tccctgccga tggcgatttc ttgcagcaca cctatgtctg
     6841 aaagctcttt caggtactta gaggccgtct gccgtttggc tatccctgcc gcttctaggt
     6901 tggcaatgcg tgtatatggc tgctcaaaca gaagatttac cagttcgtgc gtgtagattc
     6961 cttgtgcgtg tgtccgtatg tgttgacgtg tctgctcaaa caggcggcgt atcgcatcta
     7021 ttttcgctac cgtccaatcg gcggtgtcgg ctacgccgtc taagatgtag attatccagc
     7081 tttcccagtc ctgccgttcg gttacgccta aaagcaggcg gtaatagtcc gccctgtttt
     7141 cgataatata gcggctcaaa tacaaaatag gcaaatccaa aagccctttt tcaatcaata
     7201 gcaggctgtt caatatgcgc cccgtccgcc cgttgccgtc cgtaaacgga tggatggctt
     7261 caaattggta atgtgccgcc gccatgatga taagcgggtc taaatcgccg ctttcgtgaa
     7321 taaaccgctc ccaatttgcc agcttgccgc gtatggtttc ttctccttcg ggcggggtat
     7381 agacaacatt tccgctgttg cctcctttta gggctgtgcc gcctgttttg cggatggcca
     7441 tttcgtaggg gtgcttgatg gcgttgcaga ccatgatggc ggtttgtgtg cataaagggc
     7501 ggctcgtcag tgattcatag cctgcaaaca gggcggtgcg gtattgcagg gcttctttcg
     7561 tggcagggtc ttgccgttcc gtatccattt gcagggattg aaacagctta tccgttgtgg
     7621 ttacgatgtt ttcaatttcc gaacttgcac gggcttccat aacaggaagg gtgttaatca
     7681 gcatggcttg attcggtatc agttctgccg cctgctttaa acgggcaagg gatgcacggg
     7741 cggttataca acgtttcagg atggttttgc tttcaatatc ctgttttggc ggcaggggtg
     7801 gtaaatcgtt atagggaata tcgggtttcc agttgctcat atttaaaatt tcggaaaatt
     7861 taaagatgtt tccagtatat gtttacgccg tgtatatatc aaggatatat gtttaaaaat
     7921 ttggcttttg taaatatatg ggcggtaaaa ccgcattatt ttatgttgtt acctatttta
     7981 caccttgtct gcacacgatt tccaaacaac ctaaaaagaa acctgccgaa aggcaggttt
     8041 aaagaggtca ttttaaatgt gaactaaagc ttacaccctc gtagggtatc gtgtatatca
     8101 gacgtactta atatacacta
//
LOCUS       DAWITQ010000087         8112 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.087, whole genome shotgun sequence.
ACCESSION   DAWITQ010000087 DAWITQ010000000
VERSION     DAWITQ010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8112)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8112)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8112
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.087"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(265..1650)
                     /gene="pntB"
                     /locus_tag="WIX18_001417"
     CDS             complement(265..1650)
                     /gene="pntB"
                     /locus_tag="WIX18_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HEZ5238514.1"
                     /translation="MSSGLVTAAYIVAAILFIFSLAGLSKQETAKQGCYSGIAGMAVA
                     LFVTVFSDNTHGLGWIIIAMLIGAAIGIYKAKKVEMTEMPELIALLHSFVGLAAVLVG
                     FNSYIAPGNVSHDMHTIHLVEVYLGIFIGAVTFTGSLVAFGKLNGKISSSPLQLPAKH
                     KLNALALAVSFVLLLVFVGIDGSGFILLIMTLIALAFGWHLVASIGGADMPVVVSMLN
                     SYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFVSVIAGGFGSDSG
                     TLSSGSQEIGEYREVKAADIAEMLKGANNVIITPGYGMAVAQAQYPVAEITELLRKNG
                     TEVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFPETDVVLVIGANDTVN
                     PAAQTDPNSPIAGMPVLEVWKAKEVVVFKRSMNTGYAGVQNPLFFNENSVMCFGDAKK
                     TVDDILSELKK"
     gene            complement(1730..2113)
                     /locus_tag="WIX18_001418"
     CDS             complement(1730..2113)
                     /locus_tag="WIX18_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HEZ5238515.1"
                     /translation="MTFAYWCILIAYLLPLFCAAYAKKAGGFRFKDNHNPRDFLARTQ
                     GTAARAHAAQQNGFEAFAPFAAAVLTAHATGNAGQATVNTLAGLFILFRLAFIWCYIA
                     DKAALRSLMWAGGFVCTVGLFVAAA"
     gene            complement(2117..3658)
                     /locus_tag="WIX18_001419"
     CDS             complement(2117..3658)
                     /locus_tag="WIX18_001419"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HEZ5238516.1"
                     /translation="MKIGIPRESLSGETRVACTPATVALLGKLGFETVVESGAGLAAS
                     LDDAAYQTAGATVADKAAVWACPLIYKVNAPSEQELPLLNEGQTIVSFLWPRQNEALV
                     EALRAKKVNALAMDMVPRISRAQALDALSSMANISGYRAVIEAANAFGRFFTGQITAA
                     GKVPPAQVLVIGAGVAGLAAIGTANSLGAVVRAFDTRLEVAEQIESMGGKFLKLDFPQ
                     ESGGSGDGYAKVMSDEFIAAEMKLFAEQAKEVDIIITTAAIPGKPAPKLITKEMVESM
                     KSGSVIVDLAAATGGNCELTKPGELFVTDNGVKIIGYTDMANRLAGQSSQLYATNLVN
                     LTKLLSPNKDGEITLDFEDVIIRNMTVTRDGEITFPPPPIQVSAQPQQTSSEKAAPAA
                     KPEPKPVPLWKKLAPAVIAAVLVLWVGAVAPAAFLNHFIVFVLACVIGYYVVWNVSHS
                     LHTPLMSVTNAISGIIVVGALLQISQGNGFVTLLAFIAILIASINIFGGFAVTRRMLN
                     MFKKG"
     gene            3948..4781
                     /gene="serB"
                     /locus_tag="WIX18_001420"
     CDS             3948..4781
                     /gene="serB"
                     /locus_tag="WIX18_001420"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009310848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HEZ5238517.1"
                     /translation="MPHALVLQFPSAEVLPSDFPSRLPEPDCADEKRMRFIVEEGFSL
                     SEKDAALLGSRQIDHAVLPDMDFGELGLIVSDMDSTLITIECVDEIAAGVGLKDKVAE
                     ITERSMRGELDFEQSLRSRVALLAGLDERVLADVYENILKLSPGAEFLLDECKRHDVK
                     FLLVSGGFTFFTERLQQRLGFEYQHANVLEIENGRLTGRLKGRIIDAQAKADLLLEYR
                     SRLGLQPHQVLAMGDGANDILMLKETGIGVAYRAKPKVRAAADVCINFGGLERVRGLF
                     R"
     gene            4847..6070
                     /locus_tag="WIX18_001421"
     CDS             4847..6070
                     /locus_tag="WIX18_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEZ5238518.1"
                     /translation="MGRRKLWFALAAAGVIGGLVGIVLTELMHFIQHTAYGYGADGAY
                     ISFREGVARASEGRRLGVLILCGMLAGGGWWLLKRFGKPQIEIKAALKQPLQGLPFLT
                     TVFHVLLQIITVGLGSPLGREVAPREMTAAFAFAGGRRLGLDEDEMRLLIACASGAGL
                     AAVYNVPLASTLFILEAMLGVWTQQAVAAALLTSVIATAVARIGLGDVQQYHPANLTV
                     STSLLWFSAVIGPILGATAVFFQRTAQKFPFIKRDNIRIILLAVCMFALIGVISVWFP
                     EVLGNGKAGNQLTFSGLTGWQYALELAAVKWPVVLMALAAGAYGGLITPSMMLGSTVS
                     FAAAAAWNSVFPAMPSESAAVVGAAVFLGVSLKMPLTAIVFVLELTYAPLSLLLPLCI
                     GMAGALGTSGKMGFK"
     gene            6230..7810
                     /gene="purH"
                     /locus_tag="WIX18_001422"
     CDS             6230..7810
                     /gene="purH"
                     /locus_tag="WIX18_001422"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HEZ5238519.1"
                     /translation="MSVIKRALISLSDKAGAVEFAQTLHKLGVEILSTGGTAKLLADA
                     GVPVIEVADYTGFPEMLDGRVKTLHPKIHGGILGRRDLDEHVAKMEEHGIGNIDLVCV
                     NLYPFAATIAKPGCTLEDAIENIDIGGPTMVRSAAKNWKHVAIVTDTADFPAIAAEME
                     ANNGALSDKTRFNLSRKAFSHTAQYDGMISNYLTSLSDDVLSGQPQIGEFPSRFNQSW
                     IKVQDMRYGENPHQRAAFYRDIYPAAGSLAAYKQLQGKELSYNNIADADAAWEAVKSF
                     DAPACVIVKHANPCGVAVAADTLTAYKLAYVTDTTSAFGGIIAFNREVDGETVKQITD
                     NQFMEVLMAPKFTAEALEIAAAKKNVRVLEVPLEAGANRFELKRIGGGLLVQTPDIHR
                     ISRADLKVVSKRQPTEQEWNDLLFVWNVAKYVKSNAIVFGKGGQTYGIGAGQMSRVDS
                     TRIAARKAQDANLDLNGACAASDAFFPFRDGVDVIAEQGIKAIIHPAGSMRDQEVFDA
                     ADEHGIAMVVTDVRHFRH"
BASE COUNT         1799 a         2183 c         2300 g         1830 t
ORIGIN      
        1 caagtggaaa aatacttggc agattatcag gcacacttgg aaaaagtgtt cggctaatta
       61 aaaatccatc ttcaacacgg agatggattt tgtttgtttc gttgattttg tgtcagtttc
      121 agatgtaggt gcttattcgg acgggccgtc tgaaaatgtt tgccccaatg caaaaaaatc
      181 actgcaaacc ttcataaacg gggtttgcag tgattttttc aaatcaaaca gattgaaaac
      241 ctgcgccgaa ttgttcagac ggcattattt tttcagttcg gacagaatgt catctacggt
      301 tttcttcgca tctccgaaac acatcacgct gttttcgttg aagaacagtg ggttttgtac
      361 acctgcgtag ccggtattca tcgagcgttt gaagacgacg acttcttttg ccttccacac
      421 ttccaacacg ggcatacccg caatcgggct gttcgggtcg gtttgggcgg cggggttgac
      481 ggtgtcgttc gcaccgatga ccaagaccac atcggtttcg gggaagtcgt cgttgatttc
      541 gtccatttcc aaaacgatgt cgtaggggac tttggcttcg gcgagcagta cgttcatatg
      601 accgggcagg cggccggcga cggggtggat gccgaagcgt acttcggtgc cgtttttacg
      661 taaaagctcg gtgatttcgg caacggggta ttgcgcttgt gcgactgcca taccgtagcc
      721 cggggtaatg atgacattgt ttgcgccttt cagcatttcg gcaatatcgg cagctttgac
      781 ttctcggtat tcccctatct cttggctgcc ggaagataat gtgccgctgt cgctgccgaa
      841 accaccggca attaccgaga caaacgagcg gttcatggct ttgcacataa tgtaggacag
      901 aatcgcgccg cttgagccga ccagcgcgcc ggtaacgatg agcaggtcgt tggagagcat
      961 gaagcctgcc gctgcggccg cccagccgga gtaggagttg agcatggaca cgaccacggg
     1021 catatctgcg ccgccgatgg aggcaaccaa gtgccagccg aatgcgaggg caatcagggt
     1081 cataatcagc aggatgaagc cgctgccgtc aatgccgaca aatacgagca gcaacacaaa
     1141 cgatacggca agtgccagtg cgttgagctt gtgtttggcg ggcagttgca gcgggctgct
     1201 gctgattttg ccgttgagtt tgccgaatgc gaccagcgag ccggtaaagg ttaccgcgcc
     1261 gatgaagatg cctaaataca cttcgaccag atggatggtg tgcatatcgt gcgaaacgtt
     1321 gcccggcgcg atatagctgt tgaagccgac caaaaccgcc gctaggccga cgaagctgtg
     1381 cagcagggca atcagttcgg gcatttcggt catttccacc tttttggctt tgtagatgcc
     1441 gattgccgcg ccgatgagca tggcgatgat gatccagccc agtccgtggg tattgtcgga
     1501 aaaaacagtt acaaaaaggg cgaccgccat accggcgata ccggaatagc agccctgttt
     1561 ggcggtttcc tgcttggaca gccccgccag cgaaaagata aataaaattg cggcaacgat
     1621 atacgccgct gttacgagtc ctgaagacat ggaaattctc cgattttcga tgatttgttt
     1681 tcaatgccgt ctgaaaaatt gacgttcgtg ttttcagacg gcatctgttt caagcagccg
     1741 cgacaaacag cccgacggtg cagacaaatc cgcccgccca catcagcgag cgcaatgctg
     1801 ctttgtcggc gatgtagcac cagataaagg cgaggcggaa caggatgaac aggccggcaa
     1861 gcgtgttgac ggttgcttgt ccggcattgc cggttgcatg tgccgtcaaa acggcggcag
     1921 caaacggtgc aaaggcttca aaaccgtttt gctgcgcggc gtgggcacgg gcggctgtgc
     1981 cttgcgtgcg cgccagaaaa tcgcgcggat tgtggttgtc tttaaaccgg aatccgcccg
     2041 cttttttggc atacgccgca caaaaaagcg gcaataggta ggcaatcaga atacaccaat
     2101 aggcgaaagt catggcttac cctttcttaa acatattcag catacgccgt gttaccgcaa
     2161 agccgccgaa gatgttgatg ctggcaatca ggatggcgat gaaggcaagc agggtaacga
     2221 agccgttgcc ttggctgatt tgcagcagcg cgccgacgac gatgatgccg gagatggcgt
     2281 tggtcacgga catcagcggg gtatgcagcg agtggctgac gttccagacg acgtagtagc
     2341 cgatgacgca ggcgaggacg aacacgatga agtggttcaa aaatgctgcg ggcgcgaccg
     2401 cgccgaccca cagcaccaac acggcggcga tgacggcggg cgcgagtttc ttccacaggg
     2461 gaacgggttt cggctccggc ttggcggcag gcgcggcttt ttcagacgac gtttgctgcg
     2521 gctgggcgga aacttgaatc ggcggaggcg ggaaggtgat ttcgccgtcg cgggtaacgg
     2581 tcatgttgcg gataatcacg tcttcgaagt ccaacgtgat ttcgccgtct ttgttcgggc
     2641 ttaacagctt ggtcaggttc accaagttgg tggcgtaaag ctgggaagac tgtccggcaa
     2701 ggcggtttgc catgtcggtg tagccgatga ttttcacgcc gttgtcggtt acgaacaatt
     2761 cgcccggttt ggtgagttcg cagttgccgc ccgtcgccgc cgccaaatcg acgatgacgg
     2821 agccggattt catgctttcc accatttctt tggtaatcag cttgggcgcg ggtttgcccg
     2881 gaatggcggc ggtagtgatg atgatgtcca cttcttttgc ctgctcggca aagagcttca
     2941 tctcggcggc gataaattcg tcgctcatca ctttggcgta gccgtcgccg ctgccgcccg
     3001 attcttgcgg gaagtcgagt ttcaggaact tgccgcccat cgattcgatt tgttccgcca
     3061 cttccaagcg ggtatcgaac gcgcgtacca ctgcgccgag cgagtttgcc gtaccgatcg
     3121 ccgccaaacc cgccacacct gcaccaatca ccaaaacctg cgcgggcggc actttgccgg
     3181 cggcggtaat ttgaccggtg aagaaacggc cgaaggcgtt ggcggcttca atcacggcgc
     3241 ggtagccgct gatgtttgcc attgaagaca aagcgtccaa agcctgcgcg cgcgaaatgc
     3301 ggggcaccat atccatcgcc agcgcgttca ctttcttggc gcgcaaggct tcgaccaaag
     3361 cctcgttttg gcgcggccac aggaagctga cgatggtttg accttcgttc aaaagcggca
     3421 gttcctgttc ggacggcgcg ttgaccttat aaatcaaagg gcaggcccaa accgccgctt
     3481 tgtcggcaac ggttgcgcct gctgtttggt aagcggcatc gtccaaactt gccgccaaac
     3541 ctgcaccgct ttcgacaacg gtttcaaagc ccagtttgcc caacagggca acggtggcgg
     3601 gcgtgcaggc gacacgggtt tcgccggata atgactcgcg tgggataccg attttcatct
     3661 ctgaatcctt tttcgggttg tttatatgta tcgtgggtta aatttaaatc ggggcagggc
     3721 ggagcaacgc cgtaccggtt taaagccgac tcacttcaaa tgttaatata ttttagataa
     3781 tccccttata acgaattttc atcaggctgg caatagttgc ggcattttcc cgtgttgtcc
     3841 gacacatact gccgtttgcg tttgaagtca ttttccgatt gcagtcccgc ccgccgtaac
     3901 attctttgcc gtttcactat ataatccgca ttttttgagc cgccgttatg ccgcacgccc
     3961 tcgtcctcca atttccctcc gccgaagtcc tgccttccga cttcccctca cgcctgcccg
     4021 aacctgattg cgccgatgaa aagcgtatgc gttttatcgt tgaagaaggg ttttctttaa
     4081 gcgaaaaaga cgcggcgttg cttggcagcc gtcaaatcga ccacgccgtg ttgccggata
     4141 tggatttcgg cgaactcggt ttgattgtca gcgatatgga ttcgacgctg attaccatcg
     4201 aatgcgtcga tgaaattgcg gcaggcgtgg gtttaaaaga caaagtagcg gaaattaccg
     4261 agcgttcgat gcgcggcgaa ctcgatttcg aacagtcttt acgcagccgc gtcgcgctgt
     4321 tggcgggatt ggacgaacgg gttttggcgg atgtttatga aaacattttg aagctctcgc
     4381 ccggtgcgga atttttgttg gacgaatgca aaaggcacga tgtgaaattc ctgctggtgt
     4441 cgggcggctt cacgtttttt accgaaaggc tgcaacaacg cctcggcttc gaataccagc
     4501 acgccaatgt tttggaaatt gaaaacggca ggctgaccgg ccgtctgaaa ggtagaatca
     4561 tcgacgcgca ggcaaaggca gatttattgc tcgaataccg cagccgcctc ggattgcagc
     4621 cacatcaggt gttggcgatg ggcgacggtg cgaacgatat tctgatgctc aaagaaacgg
     4681 gcataggcgt ggcttaccgt gccaaaccga aagtgcgggc agccgccgat gtctgtatca
     4741 acttcggcgg tttggagcgt gtacgcggcc tgttcaggta ggcggatagg aaacggatgt
     4801 cgtctgaaaa acgtgttcag acggcatttg aacggcagga acgacagtgg gacgcagaaa
     4861 actttggttt gccctggcag cagcaggcgt tatcggcggt ttggtcggca ttgtgctgac
     4921 ggaactgatg cacttcatac agcatacggc atacggttat ggcgcggacg gtgcgtacat
     4981 ctcgttccgc gaaggtgtgg cccgtgcttc ggaagggcgg cgtttaggcg tattgattct
     5041 gtgcggtatg ttggcaggcg gcggctggtg gttgctcaaa cgtttcggta agccgcaaat
     5101 cgaaatcaaa gccgccttga agcagccgtt gcaggggctg ccgtttctga cgacggtttt
     5161 ccatgttctg ctgcaaatca taacggtcgg actcggttca ccgctcggac gggaagtcgc
     5221 cccgcgtgaa atgactgccg cgttcgcttt tgccggcggc aggcggttgg gtttggatga
     5281 agacgaaatg cggctgctga ttgcttgcgc ttcgggtgcg ggtttggcgg ccgtgtataa
     5341 cgtgccgctc gcctccacac tttttatcct cgaagccatg ctgggcgtgt ggacgcagca
     5401 agccgtcgcc gccgcattgc tgacttccgt catcgccacc gccgtcgcgc gcatcggctt
     5461 aggcgacgtg cagcaatatc atccggctaa ccttaccgtc agcacctcat tactttggtt
     5521 ttccgccgtc atcggcccga tactgggcgc aaccgccgtc tttttccagc gcacagccca
     5581 aaagtttccc tttatcaagc gcgacaatat tagaatcatt ctcttggcag tctgcatgtt
     5641 tgcgctcatc ggcgtgattt ccgtttggtt tcccgaagtt ttgggcaacg gcaaagcagg
     5701 caaccaactg acttttagtg gtttgaccgg ttggcaatac gctttggaac ttgccgccgt
     5761 caaatggccg gtcgtcttga tggcgctggc ggcaggcgca tacggcggac tgattacgcc
     5821 gtcgatgatg cttggcagca ccgtttcttt tgctgccgcc gccgcgtgga acagtgtttt
     5881 ccccgcaatg ccgtctgaaa gcgcggcagt cgtcggagcg gcggtgtttc tcggcgtatc
     5941 gctcaaaatg ccgctgaccg ccattgtgtt cgtattagaa ctgacctacg cgccgctgtc
     6001 cctgctgctg cctttgtgca tcggcatggc gggggcattg ggaacatcgg gaaaaatggg
     6061 cttcaaatga atgtcgacaa atgccgtctg aaaggttttc agacggcatt tctttgtaaa
     6121 ttgtcaacaa tatctgcaaa aatctactgc caaaaaactg aaaatagcgg ataataccgc
     6181 cccgaaaaag ttcccctttc cccatccaac tgtcagaaaa ggaagcccaa tgtccgtcat
     6241 caaacgtgcc ctgatcagcc tgtccgacaa ggcaggcgcg gtcgaatttg cccaaaccct
     6301 gcacaagctc ggtgtcgaaa tcctctccac cggcggcacg gcgaaactgc ttgccgatgc
     6361 gggcgttccc gtgattgaag tcgccgacta taccggcttc cccgaaatgc tcgacggccg
     6421 cgtgaaaacg ctgcatccga aaatccacgg cggtattttg ggtcggcgcg atttggacga
     6481 acacgttgcc aagatggaag aacacggtat cggcaacatc gaccttgtgt gtgtcaacct
     6541 ctaccccttc gccgccacca ttgccaagcc cggctgcacg ctggaagacg cgattgaaaa
     6601 catcgacatc ggcggcccga ccatggtgcg ttctgccgcg aaaaactgga aacacgtcgc
     6661 catcgttacc gacacagccg atttcccggc catagctgcc gaaatggaag ccaacaacgg
     6721 cgcattgagc gacaaaaccc gcttcaacct ctcacgcaaa gcattcagcc ataccgccca
     6781 atacgacggc atgatttcca actacctgac ctcgctttca gacgacgtct tgagcggcca
     6841 gccccaaatc ggcgaattcc caagtcggtt caaccaaagc tggattaaag tgcaagacat
     6901 gcgctacggc gaaaatccgc accaacgcgc cgcgttctac cgcgatattt accccgccgc
     6961 aggcagcctc gctgcataca aacaactgca aggcaaagaa ttgtcctaca acaacatcgc
     7021 cgatgccgat gccgcatggg aagccgtcaa atcctttgac gcaccagcct gtgtgattgt
     7081 gaaacacgcc aatccgtgcg gcgtcgccgt tgcagccgat acattgaccg cctacaaact
     7141 cgcctacgtc accgacacca ccagcgcgtt cggcggcatc atcgccttca accgcgaagt
     7201 ggacggcgaa accgtcaaac agattaccga caaccagttt atggaagtct tgatggcgcc
     7261 gaagtttacc gccgaagccc tcgaaatcgc cgccgccaag aaaaacgtgc gcgtattgga
     7321 agtgccgctt gaggcaggcg caaaccgctt cgaactcaaa cgcatcggcg gcggactgtt
     7381 ggtacaaacc cccgacatcc accgcatcag ccgcgccgat ttgaaagtcg tctccaaacg
     7441 ccaaccgacc gagcaggaat ggaacgattt gctgtttgtc tggaacgtcg ccaaatacgt
     7501 caaatccaac gccatcgtct tcggcaaagg cggtcaaacc tacggcatcg gcgcaggtca
     7561 aatgagccgc gtggacagca ctcgcatcgc cgctcgcaaa gcgcaagatg ccaatctcga
     7621 cctcaatggc gcatgtgccg cttccgatgc tttcttcccc ttccgcgacg gcgtagatgt
     7681 cattgccgag cagggcatca aagccatcat ccatccggca ggctccatgc gcgatcagga
     7741 agtcttcgac gcagcggacg aacacggcat cgccatggtc gtaaccgacg tgcgccactt
     7801 ccgccattaa cgcagatgaa caaggcaatg ccgtctgaag ggctttcaga cggcattttg
     7861 cgctattttg tgaaggtagg gatgacggtt cgggtattcc tgacagggtg gattttcaag
     7921 gtgttgtata gggtgtagga ggattcgtaa aaggtgggat gcagggtgtg cttcagcccg
     7981 ctgcatcaaa aatttttgga gaaccggcgg gagtcggcgg ttttggtttc ggcggggacg
     8041 gtggaaatgg gtaacattga cggaatcgac ggaagcggtg ggctgaagcc cacccttgta
     8101 tattggaatc ac
//
LOCUS       DAWITQ010000088         8020 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.088, whole genome shotgun sequence.
ACCESSION   DAWITQ010000088 DAWITQ010000000
VERSION     DAWITQ010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8020)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8020)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8020
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.088"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(68..814)
                     /locus_tag="WIX18_001423"
     CDS             complement(68..814)
                     /locus_tag="WIX18_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEZ5238520.1"
                     /translation="MDFRFDIIYEYRWMFLYGALTTLGLTVVATAGGSVLGLLLALAR
                     LIHLEKAGAPMRVLAWALRKVSLLYVTLFRGTPLFVQIVIWAYVWFPFFVHPSDGILV
                     SGEAAIALRRGYGPLIAGSLALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQ
                     AMRYVILPQALRRMLPPLASEFITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPL
                     YTVALIYLLMTTFLGWIFLRLEKRYNPQHR"
     gene            complement(993..1664)
                     /locus_tag="WIX18_001424"
     CDS             complement(993..1664)
                     /locus_tag="WIX18_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HEZ5238521.1"
                     /translation="MQIKKIMKWLPVALSLLGALGYTGYGSEAVRTAVAVLDVLGAAG
                     DAGSDAPARRRASAKSGHRYTGTVSKVYDGDTLHVIDGDGAKHKIRMAYIDAPEMKQA
                     YGTRSRDNLRAAAEGRKVSVRVFDTDRYQREVAQVSVGKTDLNLMQVQDGAAWHYKSY
                     AKEQQDKADFADYADAQIQAERERKGLWKAKNPQAPWAYRRAGRSGGGNKDWMDAVGE
                     WLGIW"
     gene            complement(1733..2404)
                     /gene="rpiA"
                     /locus_tag="WIX18_001425"
     CDS             complement(1733..2404)
                     /gene="rpiA"
                     /locus_tag="WIX18_001425"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HEZ5238522.1"
                     /translation="MTTQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSG
                     KKIKGAVSTSKKSSELLAQYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHL
                     NEKIVASASEKFVCIADESKYVSRLGKFPLPVEVVESARSLVSRKLLAMGGQPELRIG
                     YTTFYGNQIVDVHGLNIDQPLTMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI
                     YPCQG"
     gene            complement(2481..2963)
                     /locus_tag="WIX18_001426"
     CDS             complement(2481..2963)
                     /locus_tag="WIX18_001426"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HEZ5238523.1"
                     /translation="MTNIRIGQGYDVHQLTEGRKLILGGVEIPFEKGLLGHSDADALL
                     HAVTDALLGAAGLGDIGSHFPDTAAEFKDADSRVLLRAAYQSVQAQGWQAVNVDTTVI
                     AQKPKLAPHIPQMRANIAADLGIDISCVNIKGKTNEKLGYLGRMEGIEAQAAVLLVRI
                     "
     gene            complement(2995..3684)
                     /locus_tag="WIX18_001427"
     CDS             complement(2995..3684)
                     /locus_tag="WIX18_001427"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HEZ5238524.1"
                     /translation="MKRKNIALIPAAGIGARFGADKPKQYVEIGSKTVLEHTIGIFER
                     HEAVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLEIGLASAD
                     DNILVHDAARCCLPSEALTRLIEQAGNAAEGGILAISIADTLKRAEGGQISATVERTS
                     LWQAQTPQLFRAGLLHRALAAENLDGITDEASAVEKLGIRPLLVQGDARNLKLTQPQD
                     AYIVRLLLNAV"
     gene            complement(3681..4415)
                     /gene="dnaQ"
                     /locus_tag="WIX18_001428"
     CDS             complement(3681..4415)
                     /gene="dnaQ"
                     /locus_tag="WIX18_001428"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HEZ5238525.1"
                     /translation="MTTRQIILDTETTGLYADGGDRLVEFAGLEMVNRQMTDKNLHLY
                     VHPERDMPEEAARVHGLTIQVLEGKNAPPFAEVGRQIADFLRGAELIIHNAKFDVGFL
                     NMEFRRMGLPTVEELGCTVTDTLAMAREMFPGQKASLDALCNRFSVDRSKRVLHGALI
                     DCELLGEVYLAMTRRQFDLMGAAAEEKMETKPVVHTETKRSGKLKVIRADENELAAHG
                     QYLDGLGEACIWRKEAVPSENGGTDA"
     gene            complement(4571..5881)
                     /locus_tag="WIX18_001429"
     CDS             complement(4571..5881)
                     /locus_tag="WIX18_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ5238526.1"
                     /translation="MYAKKGGLGLVKSRRFAPLFATQFLGAFNDNVFKTALFVMIGFY
                     GLGQNGFLPAGQMLNLGALLFILPYFLFSSLSGQLGNKFDKAVLARWVKVLEMIIMAV
                     AAYGFYIRSAPLLLACLFCMGAQSTLFGPLKYAILPDYLDDKELMMGNSLIESGTFVA
                     ILFGQILGTAVAGVPPYIVGILVLLVAVGGTVGSLFMPSVPAKAADTQIEWNIVRGTK
                     SLLRETVRYKPVFTAIIGISWFWFVGAVYTTQLPTFTQIHLGGNDNVFNLMLALFSIG
                     IAAGSVLCAKFSRERLMLAWVTVGALGLTVCGLVLVWLTHGHRFEGLNGIFWFLSQGW
                     AYPVMAVMTLIGFFGGFFSVPLYTWLQTASSETFRARAVAANNIVNGIFMVSAAVLSA
                     VLLFLFDSISLLYLIVALGNIPLSVFLIKRERRFLGAAAIRKKP"
     gene            complement(5871..6056)
                     /gene="ccoS"
                     /locus_tag="WIX18_001430"
     CDS             complement(5871..6056)
                     /gene="ccoS"
                     /locus_tag="WIX18_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HEZ5238527.1"
                     /translation="MESMFILVPISIILAFVIGWFFWWSGKNGQFDDLEGPAHRILMD
                     DDSTSKLIEKERENDVR"
     gene            complement(6056..6355)
                     /locus_tag="WIX18_001431"
     CDS             complement(6056..6355)
                     /locus_tag="WIX18_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238528.1"
                     /translation="MHYFSIHDQSGRHIGFFILLADDESEARPQSGRFAVKLEGGMEN
                     HVLSPFGQTEIPQYWRVVKDRIELFFDEAPVGTLRNEYLTVSGQTFVLNDLTGNM"
     gene            6706..7902
                     /locus_tag="WIX18_001432"
     CDS             6706..7902
                     /locus_tag="WIX18_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HEZ5238529.1"
                     /translation="MSQKLILVLNCGSSSLKGAVLDNGSGEVLLSCLAEKLNLPDAYI
                     TFKVNGEKHKVDLSAHPDHTGAVEALMEELKAHGLDSRIGAIGHRVVSGGELYSESIL
                     VDDEVIAGIEKCIPLAPLHNPAHLLGLRAAQSIFKGLPNVVVFDTSFHQTMPEVAYKY
                     AVPQELYEKYGLRRYGAHGTSYRFVADETARFLGKDKKDLRMVIAHLGNGASITAVAN
                     GESRDTSMGLTPLEGLVMGTRSGDIDPSVFGFLAENANMTIAQITEMLNKKSGLLGIS
                     GLSNDCRTIEEEAAKGHKGAKLALDMFIYRLAKYIGSMAVAAGGLDALVFTGGIGENS
                     DIIRERVIGYLGFLGLNIDQEANLKARFGNAGVITTAGSKAVAVVIPTNEELMIAHDT
                     ARLSGL"
BASE COUNT         1893 a         2400 c         1963 g         1764 t
ORIGIN      
        1 ataaatttgc cacaaaaaag ctgcctcaaa tgaatacccg ggcagctttt tgttgatatg
       61 actccaatca gcggtgttgc ggattgtaac gtttttccaa acgcaggaat atccagccta
      121 agaaagtcgt catcaacaga taaatcaggg cgacggtgta aagcggttct tcataaaccg
      181 aataccggcc cgtaatcgta ttctgaacat acgccaactc cgccacagca atgaccgaca
      241 gcagcgagct gtctttcaag agcgtgatga actcgctcgc caaaggcggc agcatgcggc
      301 gcaatgcctg cggcagaatc acatagcgca tcgcctgcgg ataggtcagc cccaaagaac
      361 gcgccgcctc catctgtcct ttgtctatag actggatgcc cgcgcggaaa atctcacaga
      421 tatacgcccc cgagttggcg atcagtgcca aagaaccggc aatcagcggc ccgtatccgc
      481 gacgcagcgc gattgccgcc tcgccgctga ccaaaatgcc gtctgaagga tggacgaaaa
      541 acggaaacca cacatacgcc caaatcacaa tctgcacaaa cagcggcgta ccccggaaca
      601 gcgtaacata cagcagcgaa actttacgca acgcccacgc cagcacgcgc atcggcgcac
      661 cggctttttc caagtgaatc aggcgcgcca acgccaacaa cagacccaat accgaaccgc
      721 ccgccgtcgc cacgaccgtc agccccaagg tcgtcagtgc gccgtaaagg aacatccagc
      781 ggtattcgta aataatgtca aaacgaaaat ccatataccg tccgtatcaa aaaccggcgg
      841 aactgccgcc gttgcaaaat aatccgccat tttaccgtaa aaaccgccgc ctgaactttt
      901 ttatcgcggc agacggcggt tgcgcgtctc cgcaaaaatg cagggcgcgc ggttttcaga
      961 cggcatttgc cgttcaaagc cgtgcgctgt ctttaccaaa tgcccaacca ttcgcccacg
     1021 gcatccatcc aatccttatt gcccccgccg ctcctgcctg cccggcggta cgcccacggc
     1081 gcttgcggat ttttagcttt ccacaatcct ttgcgttccc tttccgcctg aatttgagcg
     1141 tcggcataat cggcaaaatc cgccttatcc tgctgttctt tagcataact tttataatgc
     1201 cacgccgccc cgtcctgcac ctgcatcagg ttcaaatcgg ttttgccgac agaaacctgc
     1261 gccacttcgc gctggtagcg gtcggtgtcg aacacgcgca cgctgacttt cctgccttcc
     1321 gccgccgcac gcaggttgtc gcgcgaacgc gtgccgtaag cctgtttcat ctccggcgcg
     1381 tcgatatacg ccatccggat tttgtgtttc gcgccgtcgc cgtcgataac gtgaagggtg
     1441 tcgccgtcat agactttgga caccgtgcct gtgtagcggt ggccggattt cgccgatgct
     1501 cggcggcggg cgggcgcgtc ggaacccgcg tcccctgccg cgccgagtac gtcgagtacg
     1561 gcaaccgccg tccgcaccgc ctcgctgccg taccccgtat aacccaacgc acccaaaagc
     1621 gacaaggcga cgggaagcca tttcatgatt tttttaatct gcatattttt caaatgccga
     1681 tgccgtctga acatatcgga atcggatttc agacggcatc ttaacgtcag gattaccctt
     1741 ggcagggata gatgactttc gcaccctctt ccgtccccaa aatcaacaca tcggcggcat
     1801 cgcgggcgaa tatgccgttt tcgagcacgc cggtgatttt gttgatttcg tcttccatcg
     1861 tcagcggctg atcgatattc aagccgtgga catcgacgat ttggttgccg taaaacgtgg
     1921 tgtagccgat acgcagttcg ggctgtccgc ccatagcgag cagtttgcgc gaaacaagag
     1981 agcgcgcgct ttcgacgact tccacaggca gagggaattt gcccaaacgt gaaacatatt
     2041 tgctttcatc cgcaatgcag acgaattttt cggatgcgct ggcgacgatt ttttcgttga
     2101 ggtgtgcgcc gccgccgcct ttaatcattt gcagggcgtg gttcacttca tccgcaccgt
     2161 caatatagac cgccaacccc gatacttcgt tcagggaaac gacgggaata tcatattggg
     2221 caagcagttc actggatttt ttggaagtag ataccgcgcc tttgattttt ttgccgctct
     2281 tacccaaggc ttcgatgaaa aagttgatgg tcgaaccggt accgatgccg atgtattcgt
     2341 tttcgggtac gaattcgact gctttttcgg cggcgatgcg cttgagttcg tcttgtgtcg
     2401 tcatattttt gtcctttggg aaaccgtatc aacaaacagc cgccatctta acattttttt
     2461 gcacgtcctg cccgccgcgt tcaaatcctt accagcaata ccgccgcctg cgcctctatg
     2521 ccttccatgc gcccgagata accgagtttt tcgttggttt tgcctttgat gttgacgcac
     2581 gaaatgtcta tgcccaaatc ggcggcgatg ttggcacgca tttgcggaat atgcggcgcg
     2641 agtttgggtt tctgtgcaat cacggtcgta tcgacattga ccgcctgcca accctgcgcc
     2701 tgaacgcttt gatacgccgc acgcaaaagg acgcggctgt ccgcatcttt gaactctgcg
     2761 gcggtgtcgg ggaaatggct gccgatatcg cccaaacctg ccgcaccgag cagcgcgtcg
     2821 gtaacagcgt gcagcagcgc atcggcatcg gagtgtccga gcagcccttt ttcaaatggg
     2881 atttcaactc cgccaagtat cagctttctg ccttcggtca gttggtggac atcgtagccc
     2941 tgtccgatac ggatgttcgt catcgtttgt gttcctgatg ttttgaattg aagttcagac
     3001 ggcattgagc agcagcctga cgatgtatgc gtcctgcggc tgcgtcagtt tcaaattgcg
     3061 cgcgtcgccc tgcaccagca aagggcggat gcccaatttt tccacggcgg acgcttcatc
     3121 ggtaatgccg tccaagtttt ccgcagccaa tgcgcggtgc agcagccccg cgcggaaaag
     3181 ctgcggcgtt tgtgcctgcc aaaggctcgt ccgctcgaca gtggcactga tttgtccgcc
     3241 ttctgcgcgt ttgagcgtat cggcaatgga aattgccaaa atcccgcctt cggcggcgtt
     3301 gcccgcctgt tctatcaacc gcgtcaaagc ttcagacggc aggcagcagc gcgcggcatc
     3361 gtgtaccaga atattgtcat ccgccgatgc caagccgatt tccaacagtt ttgccacacc
     3421 gtttcggacg gtttcggcgc gggtctgtcc gccgtttttc cacacccgaa cctgtggaaa
     3481 tgccgtctga accttatcgg caaacgtgtc ttcgggcgag acgacaacga cggtcaaatc
     3541 gacggcctca tgccgttcaa aaatcccaat cgtatgttct aaaacggttt tgcttccgat
     3601 ttcgacatat tgcttgggtt tgtccgcacc gaaacgcgcc ccgatgccgg cggcgggaat
     3661 cagcgcgata tttttgcgct tcatgcgtcc gtcccgccgt tttcagacgg cacggcttcc
     3721 ttgcgccaga tacaggcttc gcccaagccg tccaaatatt gcccgtgcgc cgccaactcg
     3781 ttttcgtccg ccctgatgac tttcagttta ccgctgcgtt tggtttcggt atgcaccacg
     3841 ggtttggttt ccattttttc ctctgcggcc gcacccatca ggtcgaactg ccgccgcgtc
     3901 atagcaagat agacttcgcc caaaagttcg cagtcgatca atgcgccgtg caggacgcgc
     3961 ttgctgcggt cgacggaaaa acggttgcac aaggcatcca ggctggcttt ctgcccgggg
     4021 aacatttcgc gcgccatcgc cagggtatcg gtaacggtac agccgagttc ctcaacggtc
     4081 ggcaacccca tccggcggaa ctccatattg aggaagccca cgtcgaattt ggcattgtgg
     4141 ataatcagtt ccgcaccgcg caggaaatcg gcaatctgcc tgccgacctc tgcaaacggc
     4201 ggcgcgtttt tcccttccaa aacctgtatc gtcaagccgt ggacgcgtgc cgcctcttcg
     4261 ggcatatcgc gctcggggtg gacatagagg tgcaggtttt tgtcggtcat ttggcggttg
     4321 accatttcca aaccggcaaa ctcgaccaag cggtcgccgc cgtcggcata cagaccggtg
     4381 gtttcggtat cgaggatgat ttggcgtgtc gtcatatcgg tgtctttctt ctatcttcgt
     4441 aaattgctta ttttttaagc aatgtatttt tctgttttca tttcaatgca caaacccact
     4501 tattcacagt gtgttcacaa cattgggcag gcggattgtg tattttgggg acaatttttt
     4561 cagacggcat tcaaggtttt ttcctgattg ccgccgcgcc taaaaaccgc ctttcgcgct
     4621 taatcaaaaa taccgacaac ggaatattgc ccaaagcgac aatcagatac aacaaggaaa
     4681 tgctgtcaaa caaaaacagc aacaccgcgc tcaaaacggc ggcggaaacc ataaaaatac
     4741 cgttaacgat attgttggcg gcaacggcgc gggcgcggaa agtctcgcta ctggcggttt
     4801 gcagccaggt atagagcgga acggagaaaa atccgccgaa aaagccgatc agcgtcatca
     4861 ccgccatcac gggatatgcc catccttgcg ataaaaacca aaaaatgccg ttcagccctt
     4921 caaaacggtg tccgtgcgtc agccacacca aaaccaggcc gcaaaccgtc aaacccaacg
     4981 caccaaccgt tacccaagcc aacatcaggc gttccctgct gaacttggca cacagtaccg
     5041 aaccggcggc aataccgatg gaaaacaggg caagcatcag gttgaaaaca ttgtcgttgc
     5101 cgcccagatg gatttgggta aaggtcggca gttgcgtggt ataaaccgcg ccgacaaacc
     5161 aaaaccacga aataccgata atagcggtaa agacgggttt gtaccgcacc gtttcacgaa
     5221 gcagggattt tgtgccacgg acaatattcc actcaatttg ggtatcggca gccttggcgg
     5281 ggacggacgg cataaacagg ctgccgaccg tgcctccgac ggcgaccagc aaaaccagta
     5341 tcccgacaat ataaggcggt acacctgcca ccgccgttcc caaaatctga ccgaacagga
     5401 tggcgacaaa cgtacccgat tcaatcaggc tgttgcccat catcaactct ttgtcgtcga
     5461 gataatcggg caggatggcg tatttcagcg gcccgaacag cgtcgattgc gcgcccatgc
     5521 aaaacagaca cgccaaaagc agcggggcag accggatata aaacccgtat gccgccaccg
     5581 ccataatgat catttccagc accttgaccc aacgcgccaa aacggccttg tcgaatttgt
     5641 tacccaactg ccccgacagc gaggaaaaca ggaaatacgg caaaataaac aacaacgcgc
     5701 ccaagttcaa catctgtccg gcaggcagga agccgttttg ccccaaaccg taaaacccaa
     5761 tcatcacaaa cagcgcggtt ttgaacacat tgtcgttgaa cgcgccgaga aactgcgtag
     5821 cgaaaagagg tgcgaaacgg cggcttttaa ccagtcccaa accgcctttt ttagcgtaca
     5881 tcgttttccc tctctttttc aatcagttta cttgtcgaat catcatccat caggatgcgg
     5941 tgcgccggcc cttccaagtc gtcaaactgc ccgtttttgc ccgaccacca aaaaaaccag
     6001 ccgatgacaa acgccaaaat aatgctgatg ggcaccaata taaacatgct ttccatcaca
     6061 tattccctgt caaatcgttc aaaacaaaag tctgccccga cacggtcaga tattcgttac
     6121 gcaaagttcc gacgggagct tcgtcaaaaa acagctcgat acggtctttg accacgcgcc
     6181 aatattgggg gatttccgtc tgaccgaacg gcgacaggac atgattttcc attccgcctt
     6241 caagtttgac ggcaaaacgc ccgctttgcg gccgtgcttc cgattcgtcg tcggcaagca
     6301 ggatgaaaaa gcctatatgc cgtcccgatt ggtcatgaat actgaaataa tgcataaatt
     6361 tcccacccgc cttttttcag acgacaccaa ctaaaaacag ggcgaatgta ccagtttgga
     6421 cgggaagaat gcaaagaaat tctccctccc ccagccgaaa acaccggcaa accgcatatc
     6481 cccctttttt ccgtcaaaat gcccgacttc cgccattttc acgcaaacgc ccgattaagc
     6541 caagcaattg caaagatttt ttgctagaat agcctgcttc ttttatcaac cttttcagac
     6601 ggccccacta ctttcccgcc caggaaggca aaacggattc ggcacgaatc cggttagtat
     6661 ccgtgtccga ttccaatgcc gtctgaaact ttccggagta agaaaatgtc ccaaaaattg
     6721 atcttggttt tgaactgcgg cagctcgtcc ctcaaaggcg cggtcctgga taacggcagc
     6781 ggcgaagtcc tgctcagctg ccttgccgaa aaactcaacc tgcccgatgc ctacatcaca
     6841 ttcaaagtaa acggcgaaaa acacaaagtc gatctgtccg cacatcccga ccacaccggc
     6901 gcggtcgaag ccctgatgga agaactcaaa gcccacggcc tcgacagccg catcggcgcc
     6961 atcggccacc gcgtcgtcag cggcggcgaa ctgtacagcg aatccatcct cgttgacgac
     7021 gaagtcattg ccggcatcga aaaatgcatc ccgctcgccc ccctgcacaa ccccgcccac
     7081 ctcttgggcc tgcgtgccgc gcaaagcatt ttcaaaggcc tgcccaacgt cgtcgtattc
     7141 gatacctcct tccaccaaac catgcccgaa gtcgcctaca aatacgccgt tccgcaggag
     7201 ttgtatgaaa aatacggcct gcgccgttac ggcgcgcacg gtaccagcta ccgcttcgtc
     7261 gccgacgaaa ccgcgcgctt cctcggcaaa gacaaaaaag acctgcgtat ggtcattgcc
     7321 cacttgggca acggcgcgtc catcaccgcc gtcgccaacg gcgaatcgcg cgacaccagt
     7381 atgggcctga ccccgctgga agggctggta atgggtacgc gcagcggcga catcgatcct
     7441 tccgtattcg gcttcctcgc cgaaaacgcc aatatgacca tcgcccaaat cactgaaatg
     7501 ctgaataaaa aatccggtct gctcggcatt tccggcctgt ccaacgactg ccgcaccatt
     7561 gaagaagaag ccgccaaggg gcataaaggc gcgaaattgg ccttggatat gtttatctac
     7621 cgccttgcca aatacatcgg cagtatggcg gttgccgcag gcggtttgga cgcactggtc
     7681 tttaccggcg gcatcggcga aaactccgac atcatccgcg aacgcgtgat cggctacttg
     7741 ggcttcctcg gtctgaacat cgaccaagaa gccaacctga aggcacgctt tggcaacgcc
     7801 ggcgtgatta ccactgccgg cagcaaagcc gttgccgtgg tcattccgac caacgaggaa
     7861 ttgatgattg cacacgatac cgcccgcttg agcggtctgt aagattcaat ccccacgcga
     7921 actgcctccg aaaacggagg cagttttttt atccggcttt ccatgcttaa acagcaccgc
     7981 ctcttttcag acgttgacgg ttgcagccgc ttacctgaac
//
LOCUS       DAWITQ010000089         7968 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.089, whole genome shotgun sequence.
ACCESSION   DAWITQ010000089 DAWITQ010000000
VERSION     DAWITQ010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7968)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7968)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7968
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.089"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            29..1144
                     /gene="asd"
                     /locus_tag="WIX18_001433"
     CDS             29..1144
                     /gene="asd"
                     /locus_tag="WIX18_001433"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEZ5238530.1"
                     /translation="MKVGFVGWRGMVGSVLMQRMKEENDFAHIPEAFFFTTSNVGGAA
                     PDFGQAAKTLLDANDVAELAKMDIIVTCQGGDYTKSVFQALRDSGWNGYWVDAASSLR
                     MKDDAIIVLDPVNRNVIDNGLKNGVKNYIGGNCTVSLMLMALGGLFQNDLVEWATSMT
                     YQAASGAGAKNMRELISGMGAVHAQVADELADPAGSILDIDRKVSDFLRSEDYPKANF
                     GVPLAGSLIPWIDVDLGNGQSKEEWKGGVETNKILGRSDNPTVIDGLCVRVGAMRCHS
                     QAITLKLKKDLPVSEIEAILAGANDWVKVIPNEKEASIRELTPAKVTGTLSVPVGRIR
                     KLGMGGEYISAFTVGDQLLWGAAEPLRRVLRIVLGSL"
     gene            complement(1373..1903)
                     /locus_tag="WIX18_001434"
     CDS             complement(1373..1903)
                     /locus_tag="WIX18_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEZ5238531.1"
                     /translation="MQGFELEDLTLWLIRDAGEDQMWIDRWAVSYPVVQMSEASAGQS
                     IGEWQAGLQTAFERIQGRHIAVVAHGAGAAAFLAWLYRADILTRKKIANIILVPQHPD
                     IFSDDAEHTFQRVRCPCRAALVVSEHGDVPRDWAQKQADTWNARLLVSPHSGSLNGML
                     GGWQWGMKLMQEMLLA"
     gene            complement(1914..2258)
                     /locus_tag="WIX18_001435"
     CDS             complement(1914..2258)
                     /locus_tag="WIX18_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238532.1"
                     /translation="MLPNKVLGKYDWNVDGKTGIGAAWVVAAFVLPMSVWAIFMLARM
                     QGWLAPTKANPIWALVWLLICLPCLLIASKCLGWKGWRRVVNIFVCLTVCAILSVPAS
                     LLIAFTLRDLLK"
     gene            complement(2245..3024)
                     /gene="xth"
                     /locus_tag="WIX18_001436"
     CDS             complement(2245..3024)
                     /gene="xth"
                     /locus_tag="WIX18_001436"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEZ5238533.1"
                     /translation="MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADL
                     SADMKNPHGMHGYWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGR
                     LSVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLK
                     NWKGNQKNSGFLPEEREWIGKVIHTLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGW
                     RIDYQMVTPELAAKAVSAHVYKDEKFSDHAPLVVEYDYAAE"
     gene            complement(3195..4616)
                     /locus_tag="WIX18_001437"
     CDS             complement(3195..4616)
                     /locus_tag="WIX18_001437"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEZ5238534.1"
                     /translation="MTTIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVM
                     VVFDMIARWLRECGYPLTYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADA
                     LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSL
                     DDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFG
                     DTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFI
                     RVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTR
                     LYTTLKNTPAAEFDLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQL
                     AGCLKALGGIIGLLQRDPIEFLQGGAASDGLSNEEIEDLIARRKQARADKNWAESDRI
                     RDLLNEHKIILEDNAGGTTWRRG"
     gene            complement(5304..6353)
                     /locus_tag="WIX18_001438"
     CDS             complement(5304..6353)
                     /locus_tag="WIX18_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEZ5238535.1"
                     /translation="MSSNQYIQSLELTNFTVLPNDTFEFSENLNVIVAENGCGKTHLL
                     KILYSLLEVTSNTKNRLLKTELQKSFADKLLNVFRPDSLGRLSKRLQGRGRTEIVLKL
                     QNGTTHSSLNFSSNSSSQVNVQSIGLKENEYTPTPIFLPSRELITLCPWFTSLYQNQS
                     IPFEETWFDTCMQLNHPLAKGPRETKIRELLEPIENAMGGKVSEEQGRFYLSLTNTGG
                     KIEAPLVAEGLRKFVMIARLIATGALLDKGYLFWDEPEANLNPKLIKVAARIIWSLSQ
                     QGIQVFIATHSLFLLRELELLKLENNTDLPVRFFSLIASDDGTKVEQGNSINDLNTLI
                     LLDENIMQADRYLNI"
     gene            complement(6436..7590)
                     /gene="obgE"
                     /locus_tag="WIX18_001439"
     CDS             complement(6436..7590)
                     /gene="obgE"
                     /locus_tag="WIX18_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEZ5238536.1"
                     /translation="MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGS
                     VWAEADENTNTLVEYRFVKRYQAKNGEKGHGSDRYGAGADDIVLKMPIGTLIRDLDTD
                     EIVADLTYHGQRVCLAKGGKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLA
                     DVGLLGMPNAGKSTLITAVSAARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLI
                     EGAAEGAGLGHRFLKHLSRTGLLLHVVDLAPFDETANPAEEALAIINELRKYDEELYD
                     KPRWLVLNKLDMLDEEEAQARSAAFLEAIGWDYPKPDDRFQFDMETPRLFQISALTHQ
                     GTQELVHQINQYLTEKKRIEAEKAEAEKAAANVEIIEQQPKTDTGVFKPE"
     gene            complement(7883..7968)
                     /locus_tag="WIX18_001440"
                     /pseudo
     CDS             complement(7883..7968)
                     /locus_tag="WIX18_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_060537127.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT         1825 a         2060 c         1995 g         2088 t
ORIGIN      
        1 taacgatttt tcctcaagga gcaacacaat gaaagtaggt ttcgtcggct ggcgcggtat
       61 ggtcggttcg gttttgatgc agcgtatgaa agaagaaaac gacttcgccc acattcctga
      121 agcgtttttc tttaccactt ccaacgtcgg cggcgcagcc cctgatttcg gtcaggcagc
      181 caaaacattg ttggatgcca acgatgttgc cgaattggca aaaatggaca tcatcgttac
      241 ctgtcagggc ggcgattaca ccaaatccgt gttccaagcc ctgcgcgaca gcggctggaa
      301 cggctactgg gttgacgcgg catcttctct gcgcatgaaa gacgacgcga ttatcgtcct
      361 cgaccctgtc aaccgcaacg ttatcgacaa cggcctcaaa aacggcgtga aaaactacat
      421 cggcggcaac tgcaccgtct ccctgatgct gatggctttg ggcggcctgt tccaaaacga
      481 tttggtcgaa tgggcaacca gcatgaccta ccaagccgct tccggcgcag gtgcgaaaaa
      541 catgcgcgaa ctcatcagcg gtatgggcgc ggttcacgcc caagtggcgg acgaacttgc
      601 cgatcctgcc ggctcgattc tcgacatcga ccgcaaagta tccgatttcc tgcgcagcga
      661 agactatccg aaagccaact tcggcgtacc gctcgccggc agcctgattc cgtggattga
      721 cgtggatttg ggcaacggcc agtccaaaga agaatggaaa ggcggcgtgg aaaccaacaa
      781 aatcctcggc cgcagcgaca atccaaccgt gattgacggc ctgtgcgtcc gcgtcggcgc
      841 gatgcgctgc cacagccaag ccatcactct gaagttgaaa aaagacctgc ccgtttccga
      901 aatcgaagcg attttggcag gcgcgaacga ctgggtgaaa gtcatcccca acgaaaaaga
      961 agccagcatc cgcgagctga cccccgccaa agttaccggc acgctgtccg tccccgtcgg
     1021 acgcatccgc aaactgggta tgggcggcga atacatcagc gcgttcaccg tcggcgacca
     1081 gctcttgtgg ggcgcggccg agccgctgcg ccgcgtattg cgtatcgtgt tgggcagcct
     1141 gtaagccctg tttgaatgga aatgccgtct gaagcctgtt tcagacggca ttttccttgc
     1201 aaccctgccg gataacgccc tgccggcact gccgacgtaa aaaataaagg attccatttc
     1261 cggcggtatg cggcagcccg actttatccg aacctgatgc gcctgcacgt caatgaaaac
     1321 agcccgatat gcggacttcc tgctacagcc gaaattccga taaggcaagc gttcacgcca
     1381 gcaacatttc ctgcatcagc ttcatacccc actgccagcc gccgagcata ccgttcaaac
     1441 tgcccgaatg cggggaaacc aacaggcgcg cgttccacgt atccgcctgt ttttgcgccc
     1501 aatctcgcgg cacatccccg tgttcggaca ccaccaatgc ggcacggcag ggacagcgga
     1561 cgcgttggaa agtgtgttcc gcatcgtcgg agaaaatatc gggatgctgc ggtacaagga
     1621 tgatgttggc aattttcttc cgtgtcagga tgtctgcgcg gtacagccac gccaagaatg
     1681 cggccgcacc cgcgccgtgt gcgacaacgg cgatatgcct gccctgtatc cgttcgaatg
     1741 ccgtctgaag ccctgcctgc cattccccta tgctttgacc ggccgatgct tcggacatct
     1801 gcacgacggg ataactgacc gcccaacggt ctatccacat ctgatcttct ccggcatcgc
     1861 gtatcagcca aagcgtcaaa tcttcgagtt cgaaaccctg cataccgccg cgcctatttc
     1921 agcaggtccc ggagggtaaa ggcgatgagc agcgaagcgg ggacgctcaa tatggcgcag
     1981 acggtcaggc agacaaaaat attcaccacc cgccgccagc ctttccaacc caaacatttg
     2041 gacgcaatca gcaggcaggg caggcaaatc agcagccaca ccaacgccca tatcgggttt
     2101 gccttggtcg gcgcaagcca gccctgcatc cgcgccagca taaatatcgc ccacaccgac
     2161 ataggcagca caaatgccgc cacgacccat gccgcgccta ttcctgtttt tccgtccaca
     2221 ttccaatcat atttacccaa aactttattc ggcagcatag tcatactcca cgaccagcgg
     2281 cgcatggtcg gaaaattttt cgtctttata aacatgtgcg gacacggctt tggcggcaag
     2341 ttcgggcgta accatctgat aatcgatgcg ccacccgaca tctttcgcat acgcctgtcc
     2401 gcggttgctc caccaagtgt agcccggatt gtcgggataa agcgtgcgcc acatatccgt
     2461 ccagcccagc gtatggatga ccttgcctat ccactcgcgc tcttcgggca ggaagcccga
     2521 atttttctga ttgcccttcc agtttttcag gtcgatgttt tggtgggcga tgttccagtc
     2581 gccgcagacg acaatgtcgc gcccttcgtt tttcatcgct tcgagcatag ggtaaaacgc
     2641 atcgaggaaa cggtatttca cctgctggcg ttcttctgcg ctgctgccgc tgggcaaata
     2701 aagcgaaata acgctcaacc tgccgaaatc gcaacgcaca aaccgccctt ccctgtcgaa
     2761 ttcttcaatg cccataccga tttgcacatt gtcgggtttg cgtttgctgt acaccgccac
     2821 gccgctgtaa ccacgcttct cggcgcaatg ccaatagccg tgcatcccgt gcggattttt
     2881 catatcggca gacaaatcag cctcctgcgc tttgagttcc tgcacgcaga caatgtccgc
     2941 gcccgatgcg gcgatatatt cgtaaaaacc ttttttgtag gcggagcgga tgccgttgac
     3001 gttggcggaa atgattttaa gcataataaa aataagttct cacaatgttc ccatacacaa
     3061 agcagcaccc ggtgcgccgc ccggcatttc ccattcggcc ctgcctgctg aaaacggcgg
     3121 ggcttcaagc gggaaatgcc gtctgaaaac ggaaaaagag caaaaggcgg tacttttgcc
     3181 ctttccgata cagttcaacc gcgccgccaa gtcgtaccgc cggcgttgtc ttccagaatg
     3241 attttgtgtt cgttcagaag gtcgcggatg cggtcggact ctgcccagtt tttatccgcg
     3301 cgcgcttgtt tgcgccgtgc gattaagtct tcgatttctt cgttggagag gccgtctgaa
     3361 gccgcgcctc cttgcaggaa ctcaatcgga tcgcgttgca gcagtccgat gatgccgccc
     3421 aaggctttca ggcagccggc gagctgtgcg tcattggttt tgttcacttc gcctgccagt
     3481 tcgaacaaca cggcaaccgc ttcgaccgta ccgaaatcgt cgttcatggc ggcgtagaag
     3541 cggcgggtgt agccgttggc gttttcggat aaatcaaact cagccgccgg cgtgtttttc
     3601 aaggtggtgt acagacgggt cagcgcacct tttgcatcgt ccaaatgcgc gtcggaatag
     3661 ttcaacgggc tgcggtagtg ggcgcgcagg atgaagaagc gcacgacttc ggggtcgtat
     3721 tgtttcaaca cttcgcggat ggtgaagaag ttgcccagtg atttggacat tttttcgccg
     3781 tccacgcgga taaagccgtt gtgcagccaa tatttgacgt ggctggcgat gctttgcccg
     3841 tggtgggttt gcgcgtgatg atgaccgcag gtatgccccg tcgcgccgac gctttgggca
     3901 atttcgtttt cgtggtgcgg aaactgcaaa tccgcgccgc cgccgtggat gtcgaaggta
     3961 tcgccgaaca ggttttcact catggcagag cattcaatgt gccaacccgg acggccgttg
     4021 ccccacgggc tttcccacgc cggttcgcct gctttcgccg ctttccacaa tacaaaatca
     4081 agcggatcgc gtttgaaacc gtccacttcc acgcgctcgc ccgcgcgcag gtcgtccaat
     4141 gatttgcccg ataattgtcc gtaagccgaa aactcgcgca cggcgtagta aacgtcgccg
     4201 tttgcggcag gataggcttt gccgttttga atcagggtct caatcatggc aatcatctgc
     4261 ggaatgtttt ctgttgcctt cggctcaata tccggacgca acacacccaa agcatcggca
     4321 tcttcgtgca tagcctgaat gaaacgcgca gtcagctcgc cgatggtttc gccgttttca
     4381 gccgcacggg cgatgatttt gtcgtcgatg tcggtgatat tgcgcacata agtgagcgga
     4441 taaccgcact cgcgcaacca acgggcaatc atgtcgaaca ccaccatcac acgggcatgg
     4501 cctaagtggc aatagtcgta aacagtcatg ccgcaaacgt acatacgcac gttttcaggg
     4561 tcgatggggg caaagggttc tttttggcgg gtaagggtgt tgtagatggt ggtcatggga
     4621 ttatggatta atctttgttg ctcggatgat aatttctgtt ctgttcctgt agatacggac
     4681 caaggaacat tacgtagttg cggattatta atatggctga tatttgtgaa aattggttct
     4741 gcataacagt ttgcaaaatt ttttgtaaat tctgataatt taaacttatc ttttaataag
     4801 tttgctaaat ctgatgacga gggataaagt ttacttctta tactaggcat ttcaatatga
     4861 aggactattt ttatttcgtt acaatctaaa gccaagcgag aaaaatcttt ttcttcctgt
     4921 ttttctgctt taaatttagc agaaaccaat cctgccaatg aatctcgaat ttttcttgcg
     4981 attaaatatg gtaggtcaga aagtttttca tctattgatt gggcatttgg ctcaagccca
     5041 agtcggtaat aatctttaat ttcgattagc caaagtgtcg actcatgaag ggctattata
     5101 tctacacctg agctgccatt atcgtcatct acactttgat ttatcccgtt ctttcccttt
     5161 tcatttgtat caattttatt acgtaaatta caactgttct gaaaaatttt ataatgttcc
     5221 cattcgtcat acttggtaac gtaataatct tcaggaaaag caaaggttaa tctcttttct
     5281 gtgattgtag tcatagctta acctcaaata ttcagatacc tgtctgcctg cataatgttt
     5341 tcatctaaca atatcaatgt gttcaaatca ttaatactgt tcccttgctc cacttttgtt
     5401 ccatcatcgg aagcaatcaa cgagaaaaaa cgtacaggta aatccgtgtt attttcaagc
     5461 ttcaaaagtt ccaattctct caataagaat aaagagtgtg ttgcaataaa aacctgaata
     5521 ccctgttgag ataaagacca aataatacgg gcagccactt tgatcaattt aggattcaga
     5581 ttagcttccg gttcatccca aaatagatag cctttatcca gcaatgcccc tgttgcgatt
     5641 aaccgggcaa tcatgacaaa tttccgcaaa ccctctgcta ccaaaggtgc ttcaatctta
     5701 ccgcccgtat ttgtcagcga tagataaaac cttccttgtt cttcagatac ttttccgccc
     5761 atcgcgttct caataggttc gagcaattct cgaatttttg tttctctggg gcctttggca
     5821 agcgggtgat ttaattgcat acaggtatca aaccaagttt cttcgaaagg gatgctttgg
     5881 ttttgataca aagaagtgaa ccaagggcaa agtgtaatta attcgcggct gggtaagaag
     5941 ataggtgtcg gagtatattc attttctttc aatccgatgc tttgaacatt gacttgcgat
     6001 gatgagttac tggaaaaatt cagactacta tgcgtagtgc cgttttgcag ttttaaaacg
     6061 atttccgtac gcccgcgccc ctgcaaacgt ttgctcaacc tgcccaagga atcgggacgg
     6121 aaaacattca gtaatttatc ggcaaaactt ttttgcaatt ctgttttcag taatctgttt
     6181 ttggtgttag atgttacttc tagcaggctg tataaaattt ttaacaaatg tgttttgcca
     6241 caaccgtttt cggcaacaat aacattgaga ttttcagaaa attcaaaagt atcgtttgga
     6301 agaacggtaa agtttgtcaa ctcaagcgac tggatatatt ggttagatga catttttaat
     6361 ccatttcaat cttgctttaa aattgtttca aacaaccttt tgtagaacaa atatcgtctg
     6421 aaaccctttc ttttttcact ccggcttaaa cacgcccgta tccgttttag gctgctgttc
     6481 gataatttca acatttgccg ctgctttctc cgcttcggct ttttcagctt cgatacgttt
     6541 tttctcggtc aggtattggt tgatttggtg taccaattcc tgcgtgcctt ggtgggtcag
     6601 cgcgctgatt tggaagaggc gcggggtttc catgtcaaat tggaaacggt cgtcgggttt
     6661 cgggtagtcc cagccgatgg cttcgaggaa ggcggcgcta cgcgcttggg cttcttcttc
     6721 atcgagcata tcgagtttgt tcagcaccag ccagcgtggt ttgtcgtaga gctcttcgtc
     6781 gtatttgcgc aattcgttga tgatggcgag ggcttcttcg gcggggttgg cggtttcgtc
     6841 gaagggtgcc aaatcgacga cgtgcagcaa taatccggtg cgcgataagt gtttgaggaa
     6901 acgatgcccc aaacccgcgc cttctgccgc gccttcaatc aggccgggga tgtcagccat
     6961 cacgaagctg tggttttcgt cgatgcgtac cacgcctaag tttggatgca gggtggtgaa
     7021 ggggtagttg gcgattttgg ggcgtgcggc ggatacggcg gtaatcaggg tggatttgcc
     7081 ggcgttgggc atacccaata agccgacatc ggcgaggact ttgagttcga gttgcaggga
     7141 gcgggtttcg ccttcttcgc cgggcgtgga ttgttttggg gcgcggttga cggaggattt
     7201 gaagtggatg ttgcccaagc cgcctttgcc gcctttggca aggcagacgc gctgaccgtg
     7261 gtaggtgagg tcggcaacga tttcgtcggt gtcgaggtcg cggataaggg tgccgatggg
     7321 cattttgagg acgatgtcgt ccgcacctgc gccgtaacga tcggagccgt ggcctttttc
     7381 gccgtttttg gcttggtagc gtttaacgaa gcggtattcg acgagggtgt tggtgttttc
     7441 gtcggcttcc gcccagacgc taccgccttt gccgccgtcg ccgccgtccg ggccgccgcg
     7501 cggtacgaat ttttcgcggc ggaaactggt tgcgccatta ccgcctttgc ctgcggcgac
     7561 ttcgattttt gcttcgtcga tgaatttcat tcaatgctct tgtttgttgg tttcaaatgg
     7621 ggggttcaga cggattaccg tgtgttttga tgccgtccga acagaatttc ggacgctatt
     7681 ataagggata agcggtattt caacacgccg tacccaaact atttgttccg cccatcttaa
     7741 tgaattttta agcaaatctt cagcctgcaa acaaaattat gtccaacttc tttggtacaa
     7801 tcgcgccttt ttgacattcc gacccgacgg aatgtccgtt caaaccgtta catataataa
     7861 gttttggggc tgtcctagat aactaggata aactcggttt tactaattgt tttaaaatgg
     7921 aacaagaact tttatctcac tgttgttaaa acgccattcg cactcctt
//
LOCUS       DAWITQ010000090         7961 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.090, whole genome shotgun sequence.
ACCESSION   DAWITQ010000090 DAWITQ010000000
VERSION     DAWITQ010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7961)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7961)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7961
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.090"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..3815)
                     /gene="hrpA"
                     /locus_tag="WIX18_001441"
     CDS             complement(<1..3815)
                     /gene="hrpA"
                     /locus_tag="WIX18_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-partner secretion exoprotein HrpA"
                     /protein_id="HEZ5238537.1"
                     /translation="MNKGLHRIIFSKKHSTMVAVAETANSQGKGKQAGSSVSVSLKTS
                     GDLCGKLKTTLKTLVCSLVSLSMVLPAHAQITTDKSAPKNQQVVILKTNTGAPLVNIQ
                     TPNGRGLSHNRYTQFDVDNKGAVLNNDRNNNPFVVKGSAQLILNEVRGTASKLNGIVT
                     VGGQKADVIIANPNGITVNGGGFKNVGRGILTTGAPQIGKDGALTGFDVRQGTLTVGA
                     AGWNDKGEADYTGVLARAVALQGKLQGKNLAVSTGPQKVDYASGEISAGTAAGTKPTI
                     ALDTAALGGMYADSITLIANEKGVGVKNAGTLEAAKQLIVTSSGRIENSGRIATTADG
                     TEASPTYLSIETTEKGAAGTFISNDGRIESKGLLVIDTGEDIGLRNGAVVQNNGNRPA
                     ATVLNAGRNLVIESKANVNNAKGSTNLSTGGRTVIKEASIQTGTTVYSSSKGNAELGN
                     NTRITGADVTVLSNGTISSSAVIDAKDTAHIEAGKPLSLEASTVTSDIRLNGGSIKGG
                     KQLALLADDNITAKTTNLNTPGNLYVHTGKDLNLNVDKDLSAASIHLKSDNAAHITGT
                     SKTLTASKDMGVEAGSLNVTNTNLRTNSGNLHIQAAKGNIQLRNTKLNAAKALETTAL
                     QGNIVSDGLHAVSADGHVSLLANGNADFTGHNTLTAKADVNAGSVGKGRLKADNTNIT
                     SSSGDITLVAGNGIQLGDGKQRNSINGKHISIKNNGGNADLKNLNVHAKSGALNIHSD
                     RALSIENTKLESTHNTHLNAQHERVTLNQVDAYAHRHLSITGSQIWQNDKLPSANKLV
                     ANGVLALNARYSQIADNTTLRAGAINLTAGTALVKRGNINWSTVSTKTLEDNAELKPL
                     AGRLNIEAGSGTLTIEPANRISAHTDLSIKTGGKLLLSVKGGNAGAPSAQVSSLEAKG
                     NIRLVTGETDLRGSKITAGKNLVVATTKGKLNIEAVNNSFSNYFPTQKAAELNQKSKE
                     LEQQIAQLKKSSPKSKLIPTLQEERDRLAFYIQAINKEVKGKKPKGKEYLQAKLSAQN
                     IDLISAQGIEISGSDITASKKLNLHAAGVLPKAADSEAAAILIDGITDQYEIGKPTYK
                     SHYDKAALNKPSRLTGRTGVSIHAAAALDDARIIIGASEIKAPSGSIDIKAHSDIVLE
                     AGQNDAYTFLKTKGKSGKIIRKTKFTSTRDHLIMPAPVELTANGITLQAGGNIEANTT
                     RFNAPAGKVTLVAGEELQLLAEEGIHKHELDVQKSRRFIGIKVGKSNYSKNELNETKL
                     PVRVVAQTAA"
     gene            complement(3924..5603)
                     /gene="hrpB"
                     /locus_tag="WIX18_001442"
     CDS             complement(3924..5603)
                     /gene="hrpB"
                     /locus_tag="WIX18_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-partner secretion system transporter HrpB"
                     /protein_id="HEZ5238538.1"
                     /translation="MEIINDAELIRSMQRQQHIDAELLTDANVRFEQPLEKNNYVLSE
                     DETPCTRVNYISLDDKTVRKFSFLPSVLMKETAFKTGMCLGSNNLSRLQKAAQQILIV
                     RGYLTSQAIIQPQNMDSGILKLRVSAGEIGDIRYEEKRDGKSAEGSISAFNNKFPLYR
                     NKILNLRDVEQGLENLRRLSSVKTDIQIIPSEEEGKSDLQIKWQQNKPIRFSIGIDDA
                     GGKTTGKYQGNVALSFDNPLGLSDLFYVSYGRGLAHKTDLTDATGTETASGSRSYSVH
                     YSVPVKKWLFSFNHNGHRYHEATEGYSVNYDYNGKQYQSSLAAERMLWRNRLHKTSVG
                     MKLWTRQTYKYIDDAEIEVQRRRSAGWEAELRHRAYLNRWQLDGKLSYKRGTGMRQSM
                     PAPEENGGGTIPGTSRMKIITAGLDAAAPFMLGKQQFFYATAIQAQWNKTPLVAQDKL
                     SIGSRYTVRGFDGEQSLFGERGFYWQNTLTWYFHPNHQFYLGADYGRVSGESAQYVSG
                     KQLMGAVVGFRGGHKVGGMFAYDLFAGKPLHKPKGFQTTNTVYGFNLNYSF"
     gene            5550..6533
                     /locus_tag="WIX18_001443"
     CDS             5550..6533
                     /locus_tag="WIX18_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RepB family plasmid replication initiator
                     protein"
                     /protein_id="HEZ5238539.1"
                     /translation="MLLTLHGTDKFCIVNNFHTNRNTAYKALKDACNNLFERQFSFIE
                     KTPKGEKVVRTRWVSQVAYIEQQATVELVFAPNVAPLITMLEKNFTSYELDQVSSLSS
                     KYAVRLYEIIISWRAAGKTPMFSTMELRERLGMMPDEYQKMELFKRKVLDFAVKQIND
                     KTDISITYEQHKEGRKIVGFTFSILHKIGSKDIPLENQSELFAGMTDLEAGTIRVRAE
                     AYIASLIAKGQNVTKAHRLNILKKAVEERWGFEDVAKDNGAKNPENKNAKVVLNEWEK
                     ISNGTRFKDKDGTIWVKDSGMLRTEGTNRWIADSQIAKLFPMLTVMVEEGI"
     gene            6630..7046
                     /locus_tag="WIX18_001444"
                     /pseudo
     CDS             6630..7046
                     /locus_tag="WIX18_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219448.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase"
     gene            complement(7052..7150)
                     /locus_tag="WIX18_001445"
                     /pseudo
     CDS             complement(7052..7150)
                     /locus_tag="WIX18_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611454.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            7243..>7961
                     /locus_tag="WIX18_001446"
     CDS             7243..>7961
                     /locus_tag="WIX18_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HEZ5238540.1"
                     /translation="MNRTLYKVVFNKHRNCMIVVAENAKREGKNTADTQAVGILPNDI
                     AGFAGFIHSISVISFSLSLLLGSALILTSSSANAQGIVADKSAPAQQQPTILQTGNGI
                     PQVNIQTPTSAGVSVNQYAQFDVGNRGAILNNSRSNTQTQLGGWIQGNPWLARGEARV
                     VVNQINSSHSSQLNGYIEVGGRRAEVVIANPAGIAVNGGGFINASRATLTTGQPQYQA
                     GDLSGFKIRQGNVVIAGHGLDA"
BASE COUNT         1927 a         1819 c         1950 g         2265 t
ORIGIN      
        1 gctgcagttt gggcgacgac gcggacaggc aatttggttt cgttcagttc gtttttactg
       61 taattgctct tacctacctt gatgccgata aagcggcggc ttttttggac atccaactcg
      121 tgcttgtgga tgccttcttc tgccagcagt tgcagctctt cacccgcaac cagggtaact
      181 ttacctgcag gggcattgaa gcgggtggta ttagcttcga tgttgccgcc tgcctgaagc
      241 gtgataccgt tggcggtcag ctcgacgggg gctggcataa tcaggtggtc gcgggtgctg
      301 gtaaacttgg tttttctgat gattttgccg cttttacctt tggtttttaa gaaggtatag
      361 gcatcgtttt gtccagcctc cagtacaata tcactatggg ctttgatgtc tatgctgcct
      421 gagggagctt tgatttcgga tgcaccgata ataatacgtg catcatcgag tgccgcagct
      481 gcatgaatac ttacccccgt acgtccggtc aaacgtgaag gcttgttcag agcagctttg
      541 tcgtagtgac tcttgtaggt gggcttgcca atttcatatt ggtcggttat gccgtcaatc
      601 agaatagcag ccgcctctga atctgctgcc tttggcaata cgcctgcggc gtgaaggttc
      661 agttttttgg aagcggtaat atcggaaccg ctgatttcga tgccttgtgc ggaaatcaag
      721 tcaatatttt gtgcagaaag cttggcttgc agatattctt tgcctttggg ttttttacct
      781 ttaacttcct tgttgatggc ttgaatatag aaagcgagac ggtcgcgttc ttcttgcagg
      841 gttggaatca gcttgctttt aggcgagctt tttttcaact gcgcaatctg ctgttccaat
      901 tctttggatt tttggttgag ttcagccgct ttttgtgtag gaaaataatt gctgaatgag
      961 ttgtttacgg cttcgatatt caacttgcct ttggtggtgg cgacaaccaa gtttttaccg
     1021 gctgtaattt tagaacctct taaatctgtt tctcctgtaa ccagacggat attgcctttt
     1081 gcttccaatg aggaaacttg agcactaggc gcacctgcat ttcctccttt tacagacaac
     1141 agcaattttc cgcctgtttt gatgctcagg tcggtatgcg cactgatgcg gttggcaggt
     1201 tcgatggtta atgtgccgct acctgcttca atattcagcc gtccggccaa tggttttaat
     1261 tcggcattat cttccaaagt tttggtcgaa acggtactcc aattgatgtt gccgcgcttg
     1321 actagggcgg taccggcagt aaggttgatt gcacccgctc tcagcgtggt gttgtcggca
     1381 atttgggaat agcgcgcatt gagtgccaat acaccgttag ccaccagctt gttggcagaa
     1441 ggcagtttgt cgttttgcca aatctggctg ccggtaatgc ttagatgacg gtgtgcgtag
     1501 gcatctactt ggttgagcgt tacccgctcg tgttgtgcat taagatgcgt attatgggta
     1561 gactccagct tggtattttc tatgctcaat gcccggtcgg aatgaatgtt caatgccccg
     1621 cttttggcat ggacgttaag gttttttaag tcggcattac caccgttgtt tttgatgctg
     1681 atgtgttttc cgttgattga attgcgttgt tttccgtcac caagctgaat accgttgccg
     1741 gcaaccaacg taatatctcc tgaagatgaa gtgatattgg tattgtctgc tttcagacgg
     1801 cctttaccaa ccgatcctgc attgacatcg gccttggctg tcagggtatt gtgaccggta
     1861 aagtcggcat taccgttggc caataaggat acatgaccgt ctgcagaaac agcatgaagg
     1921 ccgtctgaaa cgatattgcc ctgcaatgcg gtggtttcga gagccttggc tgcgttcagc
     1981 ttggtattgc gaagctgaat attgcctttg gctgcctgaa tgtgcagatt acccgagttg
     2041 gtacgcagat tggtattggt aacattcagc gagcctgcct ccacacccat gtcttttgag
     2101 gcagtgaggg ttttactggt gccggtaata tgggcagcgt tatccgattt caaatggatg
     2161 ctggcggcag acaaatcttt atcaacattc aaattcagat ctttacctgt atgaacatac
     2221 agattgccgg gagtattcag attggtagtt ttggcagtaa tgttatcgtc tgccagtaaa
     2281 gcaagctgct tgccgccctt gatactgcct ccgtttaagc ggatatcgga ggtaactgtt
     2341 gaagcttcca aagaaagcgg tttgcctgct tcgatgtgtg cggtgtcttt ggcatctatt
     2401 acggcggaac tgctgatggt gccgttggat aatacggtaa catctgcccc ggtaatgcgt
     2461 gtgttattgc ctaattcggc gttgcctttg ctggaactgt atacggtagt gccagtctga
     2521 atactggcct ccttgatgac ggtacggccg ccggtcgaca gattggtcga acctttagca
     2581 ttgttcacat ttgctttgct ttcgataacc aaattacggc cggcatttaa taccgtagca
     2641 gcagggcggt tgccgttgtt ttgaacgacc gctccgttac gcaaaccgat gtcctccccg
     2701 gtatcaataa ccaataagcc tttgctctcg atccgaccat cattggagat aaatgtgcct
     2761 gccgctcctt tttcggtggt ttcgatggag agataagtcg gtgaagcttc ggtgccgtcg
     2821 gcagtggtgg cgatgcggcc gctgttttca atgcggcctg acgaagtcac aatcaattgc
     2881 ttggccgctt cgagtgtgcc ggcatttttg acgcctacgc ctttttcatt ggcaatcagt
     2941 gtgatgctgt cggcgtacat accgcccagt gcggcagtat caagggcaat agtcggtttc
     3001 gtacccgctg ccgtacctgc actgatttcg ccgctggcgt aatctacttt ctgaggaccg
     3061 gtagaaaccg ccaggttttt accctgtaat ttcccctgca aagcaactgc acgagcaagt
     3121 accccggtgt agtcggcttc gcctttatca ttccaacctg ctgctcctac ggtcaatgtg
     3181 ccttgacgca catcaaatcc tgtcagtgca ccgtctttgc cgatttgggg cgcaccggta
     3241 gttaagatgc cccgaccgac atttttaaag ccgccgccat taacggtaat gccgttgggg
     3301 ttggcaataa tcacgtcggc cttttgaccg cctacggtaa cgatgccgtt gagtttgcta
     3361 gccgtaccgc gtacctcgtt caaaatcaat tgcgcactgc ctttgaccac aaacggatta
     3421 ttgttacggt cgttgtttaa cactgcccct ttgttgtcaa catcaaactg cgtatagcgg
     3481 ttgtggctca atccgcgtcc attcggagtt tggatattca ccaagggggc accagtgttg
     3541 gttttaagga taacgacctg ctggttttta ggtgctgatt tgtcggtggt aatttgggca
     3601 tgggcaggca ataccatact cagggaaacc aaagagcaga ccaaagtttt aagggtggtt
     3661 ttgagtttgc cgcaaaggtc gcctgaagtt ttcagtgaaa cagaaaccga actgcctgcc
     3721 tgtttacctt tgccctggct gttggcagtt tcggctactg caaccatggt gctgtgcttt
     3781 ttactaaaga taatgcgatg taaaccttta ttcatgtcta ttccattttg aagatgaacg
     3841 tactgcgcgc caagtacgta ggtaaagttt gacggtctga ggataaggaa agaccgtcta
     3901 aatatcagta aaaaattcag aggttagaaa ctgtaattca agttgaagcc gtaaacggtg
     3961 ttggtcgtct gaaagccttt gggtttatga agcggcttgc cggcaaacag atcataagca
     4021 aacataccgc ctactttatg ccctcctctg aagccgacca ctgcacccat cagctgcttg
     4081 cccgatacat attgtgcact ttcgccagat acgcggccat agtccgcacc gagatagaac
     4141 tgatggttcg gatgaaaata ccaagttaaa gtattctgcc agtagaaacc tcgctctccg
     4201 aaaagactct gctccccatc aaatccgcga acggtgtagc ggctgccgat tgacaattta
     4261 tcttgggcaa ccaacggcgt tttgttccat tgagcttgaa tggcggttgc gtagaaaaac
     4321 tgctgtttgc ccaacataaa cggggccgct gcatccaatc cggcggttat gattttcata
     4381 cgggatgtgc ctggaatagt accgccgccg ttttcttcag gtgcgggcat actttggcgc
     4441 ataccggtcc cgcgtttgta agacaacttg ccgtcaagct gccaacggtt gaggtaagca
     4501 cggtggcgca attcggcttc ccagcctgca gagcggcggc gttgcacttc gatttcggca
     4561 tcgtcgatgt atttataggt ttggcgtgtc cataatttca ttccgactga agttttatga
     4621 agtctgttac gccaaagcat gcgctcggcg gccaagctgc tctgatattg tttgccgttg
     4681 taatcgtaat tgacggaata gccttcggtt gcttcgtggt aacgatgtcc attgtgatta
     4741 aaagaaaaca gccatttttt tacgggcacc gaataatgca cgctgtaact tctggatccg
     4801 cttgcagttt ccgtaccggt ggcatcagtc aagtccgttt tgtgcgccaa accgcgtcca
     4861 tatgaaacat aaaacaaatc gcttaagccc aaagggttat cgaacgataa agcgacattt
     4921 ccttgatatt tgccggtcgt tttgccgccc gcatcatcta taccgatact gaaccgtatg
     4981 ggtttattct gctgccattt gatctgtaaa tcgcttttgc cttcttcttc ggacggtata
     5041 atctgaatat ctgttttaac actcgacaaa cgacgcaggt tttccaagcc ctgctctaca
     5101 tcgcgaagat tgagaatttt gttcctatat aagggaaatt tgttattgaa tgcactaata
     5161 ctgccttcgg cagacttccc atcccgtttt tcttcatagc ggatatcccc tatttcgcct
     5221 gctgataccc gtaatttcag aattcccgaa tccatattct gtggttggat aatagcttgg
     5281 gaagtgaggt agccacgcac gatcagtatc tgttgcgcgg ctttttgtag cctgctcaaa
     5341 ttattggaac ctaaacacat cccagtttta aaagctgttt ctttcatgag cacagaagga
     5401 agaaaagaaa atttgcgcac cgtcttatca tctaaactaa tgtaatttac ccgagtacac
     5461 ggtgtttcat cttcactcag gacataattg ttcttctcca atggttgctc gaaacggaca
     5521 tttgcatcag ttaacaattc agcatctatg tgctgctgac gctgcatgga acggataagt
     5581 tctgcatcgt taataatttc cataccaacc gtaatacggc gtataaggct ttgaaagatg
     5641 cctgtaacaa cctttttgaa cgccaattca gttttatcga aaaaacacca aaaggggaaa
     5701 aggtagtacg gacaaggtgg gtatctcaag tcgcctatat tgaacaacag gcaacggtag
     5761 agttagtttt tgcaccaaat gttgcccctt tgattacgat gctagaaaaa aacttcacaa
     5821 gctacgagct tgatcaggtc tcatcgttga gcagtaaata cgcggtgcgg ctctacgaaa
     5881 ttattatttc atggcgtgca gccggtaaga caccgatgtt cagtacaatg gagttgcgcg
     5941 aacgtttggg tatgatgcct gacgagtatc aaaaaatgga gctattcaaa cgtaaggttt
     6001 tggatttcgc cgtcaagcag atcaatgata aaacggatat ttccattacc tacgagcagc
     6061 ataaagaagg acgaaaaatt gtaggtttta cattctcaat cctacataaa atagggtcga
     6121 aagacatccc tcttgaaaat caatcggaac tttttgccgg aatgactgat ttggaagccg
     6181 gaacgatacg ggtcagggcg gaagcatata tcgcttcgct cattgcaaaa ggtcagaacg
     6241 tgactaaagc ccataggctg aatattctga aaaaagccgt agaggaacgt tggggatttg
     6301 aagatgtggc taaagataat ggggccaaaa atcctgaaaa caaaaatgca aaagtcgttt
     6361 taaacgaatg ggaaaagatt tctaatggca cacgttttaa ggacaaggat ggaacaattt
     6421 gggttaaaga ttcaggtatg cttaggactg aagggacaaa caggtggata gccgattctc
     6481 agattgccaa attatttcct atgttaactg tgatggttga ggaaggtatt taacccggca
     6541 actcgcgtat tctacctgtt ttgcggtacg gaaaccaatt gaacctgctt tacgctacaa
     6601 tagaagattg caattttgtc ggatgtacca tgaacgatta cacagccatg ccgtctgaag
     6661 acggaggaat cggctcatta tcgcttccgc cgcactcaat ggaggcggaa caatccgttt
     6721 tgggcgggtt gatgctggaa aatccggctt gggacaggat tgccgatgtg gtttcgggag
     6781 aggatttcta ccgccacgaa caccgcctga ttttccgatc cattgccaaa ctgatcaatg
     6841 agagccgtcc tgccgatgtc atcacggttc aggaagattt gcagcggaac gaagagctgg
     6901 aagcggcggg gggattcgaa tatctgatta cgctggcgca aaatactccg tctgccgcca
     6961 acatccggcg ccatgccgaa atcgtgcgcg agcgttccat tatgcgccaa ctcgccgaag
     7021 tgggaacgga aattgcccgc agcgccatac ccaaaatatc ggcagcggaa cgggcggtag
     7081 cttggagtac gaaaaattca agcagtttct tttgaactct attgtttaat ttacaattgg
     7141 ttatctttat tttcgtagcc tggcataact gttaatctac gtcagcccct aaaaattaat
     7201 ctaatttacg attataaaaa tattattaag aaagccctta ctatgaaccg caccctgtac
     7261 aaagttgtat ttaacaaaca tcgaaactgc atgatagtcg ttgctgaaaa tgccaaacgc
     7321 gagggcaaaa acacagccga cacccaagct gtaggtattt tgccaaatga tattgcgggc
     7381 tttgcgggtt ttatccattc tatctctgtt atctcattct ccctttcatt actgctcggt
     7441 tctgccctta tcctgacttc ttcttctgct aatgcccaag gtatcgttgc cgacaaatcc
     7501 gcacctgcac agcaacagcc taccatcctg caaacaggta acggcatacc gcaagtcaat
     7561 attcaaaccc ctacttcggc aggggtttct gttaatcaat acgcccagtt tgatgtgggt
     7621 aatcgcgggg cgattttaaa caacagtcgc agcaacaccc aaacacagct aggcggttgg
     7681 attcaaggca atccttggtt ggcaaggggc gaagcacgtg tggttgtaaa ccaaatcaac
     7741 agcagccatt cttcacaact gaatggctat attgaagtgg gcggacgacg tgcagaagtc
     7801 gttattgcca atccggcagg gattgcagtc aatggtggtg gttttatcaa tgcttcccgt
     7861 gccactttga cgacaggcca accgcaatat caagcaggag accttagcgg ctttaagata
     7921 aggcaaggca atgttgtaat cgccggacac ggtttggatg c
//
LOCUS       DAWITQ010000091         7801 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.091, whole genome shotgun sequence.
ACCESSION   DAWITQ010000091 DAWITQ010000000
VERSION     DAWITQ010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7801)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7801)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7801
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.091"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            41..139
                     /locus_tag="WIX18_001447"
     CDS             41..139
                     /locus_tag="WIX18_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="eamA-like transporter family protein"
                     /protein_id="HEZ5238541.1"
                     /translation="MAVVFLDERPNTQEWIGLGLVTAGVLTLALKR"
     gene            complement(210..1595)
                     /locus_tag="WIX18_001448"
     CDS             complement(210..1595)
                     /locus_tag="WIX18_001448"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HEZ5238542.1"
                     /translation="MVSIFDIFKIGIGPSSSHTVGPMKAAAAFAAGLDAQAVRIVIDI
                     YGSLALTGYGHGTFDALMLGLEGSLPHDIPLAGIPERLERIRTQHILRLNGQEIRFIP
                     DRDLNIRGNQVLPKHPNGLRFTAYASDGIVLKEQVYYSTGGGFVVTGEDFERQSETEK
                     TVPYPYNSCAELLDRCRLNRLDISEVVLANEAALAGCGEAEIRRRAAAVAEVMEGCIK
                     RGLGADGELPGGLNVRRRAPQLAAKLKVLRETEIVNTQLWPMVYAMAVNEENAAGGRV
                     VTAPTNGAAGIIPAVLHYFRKFNPHATQERVENFLLTAGAIGILYKTNASISGADVGC
                     QGEVGVACSMAAGAYAEVIGGTPKQVENAAEMAMEHHLGLTCDPVGGLVQIPCIERNG
                     IAAEKALKLGTLALLEDGTDKKVSLDEVIRTMLQTGRDMKATYKETSLAGLAATLRKK
                     AVPVSVRVVEC"
     gene            complement(1694..4084)
                     /gene="gyrB"
                     /locus_tag="WIX18_001449"
     CDS             complement(1694..4084)
                     /gene="gyrB"
                     /locus_tag="WIX18_001449"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HEZ5238543.1"
                     /translation="MTEQKHEEYGADSIQVLEGLEAVRKRPGMYIGDTQDGSGLHHMV
                     FEVLDNAIDEALAGHCDKITVTIHADHSVSVADNGRGMPTGIHPKEGRSAAEVIMTVL
                     HAGGKFDNNSYKISGGLHGVGVSVVNALSDWVTLTIYRDGKEHFVRFVRGETEEPLKV
                     VGDSDKKGTTVRFLASTETFGNVEYSFDILAKRIRELSFLNNGVDIELTDERDGKHES
                     FALSGGVAGFVQYMNRKKTPLHEKIFYAFGEKDGMSVECAMQWNDSYQESVQCFTNNI
                     PQRDGGTHLTALRQVMTRTINSYIEANEVAKKAKVETAGDDMREGLTCVLSVKLPDPK
                     FSSQTKDKLVSSEIGPVVNEVINQALTDFLEENPNEAKIITGKIVDAARAREAARKAR
                     EITRRKGVMDGLGLPGKLADCQEKDPALSELYLVEGDSAGGSAMQGRDRKFQAILPLK
                     GKILNVEKARFEKMLASQEVAALITALGAGIGKEEFNAEKLRYHRIIIMTDADVDGAH
                     IRTLLLTFFYRQMPELVERGYIYIAQPPLYKAKYGKQERYLKDELEKDQWLLGLALEK
                     AKIVSDSRTIEGEELANTAKQFLLAKTVIEQESRIIDELVLHAMLHASPVDLSTAESA
                     DRSVAELNGLLDEKEVALERIEGHEGHQFIKITRKLHGNVVVSYLEPKFLNSKAYQTL
                     TQTAAALKGMVGKGAKLYKGDNEYDIDSFEGALDILMSVAQKGMSIQRYKGLGEMNPE
                     QLWETTMDPAVRRLLKVRIEDAIAADEVFVTLMGDEVEPRRAFIENNALIAQNIDA"
     gene            4354..5226
                     /locus_tag="WIX18_001450"
     CDS             4354..5226
                     /locus_tag="WIX18_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEZ5238544.1"
                     /translation="MEIWNMLDTWLGAVPIRAEAVESVAVVAALLLARALLLNIHFKR
                     HPDFGIESKRRFLVASRNITLLLVLFSLAFIWSAQIQTLALSMFAVAAAVVVATKELI
                     MCLSGSILRSATQQYSVGDYIEINGLRGRVVDINLLNTLMMQVGPNPLVGQLAGTTVS
                     FPNSLLLSHPVRRDNILGDYVIHTVEIPVPIHLDSDEAVCRLKAVLEPLCAPYIPAIQ
                     RHLENVQAEKLFITPAARPRVTRVPYDDKAYRIIVRFASPVSKRLEIQQAVMDEFLRV
                     QYRLLNYPAGSETL"
     gene            5314..7350
                     /locus_tag="WIX18_001451"
     CDS             5314..7350
                     /locus_tag="WIX18_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HEZ5238545.1"
                     /translation="MTDNALLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQ
                     THTGWANTVEPLTGITERVGRIWGVVSHLNSVADTPELRAVYNELMPEITVFFTEIGQ
                     DIELYNRFKTIKNSPEFDTLSPAQKTKLNHDLRDFVLSGAELPPEQQAELAKLQTEGA
                     QLSAKFSQNVLDATDAFGIYFDDAAPLAGIPEDALAMFAAAAQSEGKTGYKIGLQIPH
                     YLAVIQYADNRELREQIYRAYVTRASELSDGGKFDNTANIDRTLANALQTAKLLGFKN
                     YAELSLATKMADTPEQVLNFLHDLARRAKPYAEKDLAEVKAFARESLNLADLQPWDLG
                     YASEKLREAKYAFSETEVKKYFPVGKVLNGLFAQIKKLYGIGFTEKTVPVWHKDVRYF
                     ELQQNGETIGGVYMDLYAREGKRGGAWMNDYKGRRRFSDGTLQLPTAYLVCNFAPPVG
                     GREARLSHDEILILFHETGHGLHHLLTQVDELGVSGINGVEWDAVELPSQFMENFVWE
                     YNVLAQMSTHEETGEPLPKELFDKMLAAKNFQRGMFLVRQMEFALFDMMIYSEDDEGR
                     LKNWQQVLDSVRKEVAVIQPPEYNRFALSFGHIFAGGYSAGYYSYAWAEVLSADAYAA
                     FEESDDVAATGKRFWQEILAVGGSRSAAESFKAFRGREPSIDALLRHSGFDNAA"
BASE COUNT         1658 a         2184 c         2163 g         1796 t
ORIGIN      
        1 tcttgccgga tgctgcaaac aacgccggtt tgcattcctg atggcggtgg ttttcttaga
       61 cgaacgcccg aacacgcagg aatggatagg cttggggctg gttacggcgg gcgtgttgac
      121 gctggcactg aaacggtaaa gccgcaagaa ataaatgaaa tgccgtctaa aaaactgttt
      181 tcagacggca ttttcgtttc tgtccatcct cagcactcga ccacgcgcac ggatacgggg
      241 acggcttttt tccggagcgt ggcggcgagt ccggcaagcg aggtttcttt gtaggtcgcc
      301 ttcatatccc ggccggtttg cagcatggtt cggatgactt cgtcgagcga gacttttttg
      361 tccgtgccgt cttctaaaag cgcgagcgtg ccgagtttga gggctttttc ggcggcgatg
      421 ccgttgcgct cgatgcaggg gatttgcacc agtccgccga cggggtcgca agtcagcccc
      481 aaatggtgtt ccatcgccat ttcggcggcg ttttccactt gtttgggcgt gccgccgatg
      541 acttcggcgt atgcgcccgc cgccatcgaa cacgctacgc cgacttcgcc ctgacagccg
      601 acatccgcac cggaaatgga ggcgttggtc ttgtagagga tgccgattgc gcctgcggtg
      661 agcaggaagt tttcgacgcg ttcctgtgtg gcgtgcggat tgaacttgcg gaaatagtgc
      721 aatacggcgg gaatgatgcc tgccgcgccg ttggtcggtg cggtaacgac gcgtccgccg
      781 gcggcgtttt cttcgttgac cgccatggcg tacaccatcg gccagagctg ggtgttgacg
      841 atttcggttt cgcgcaggac tttgagcttg gcggcaagct gcggggcgcg gcggcggacg
      901 ttcaatccgc cgggcagttc gccgtccgca cccaagccgc gtttgatgca gccttccata
      961 acctcggcaa cggcagcggc gcggcggcgg atttcggctt cgccgcatcc ggcaagcgcg
     1021 gcttcgtttg ccaacacgac ttcggagatg tcgagccggt tcagacggca tcggtcaagc
     1081 agctcggcac aactgttgta aggataagga acagtttttt ccgtttccga ctgccgctcg
     1141 aaatcttctc cggtaacgac aaacccgccg ccggtcgagt aataaacctg ttctttcaag
     1201 acgatgccgt ctgaagcata ggcggtaaat cgcaggccgt tggggtgttt gggcagcact
     1261 tgattgccgc gtatgttcag gtcgcggtcg gggatgaagc ggatttcttg cccgttgagc
     1321 cggaggatgt gctgcgtgcg gatgcgttcg aggcgttcgg gaatgccggc aagcgggatg
     1381 tcgtgcggca ggctgccttc caaaccgagc atcagcgcgt caaatgtacc gtgtccgtat
     1441 ccggtcagtg cgagcgagcc gtaaatgtcg atgacgatgc gaacagcctg tgcatccaaa
     1501 cctgccgcaa aggcggcggc tgccttcatc gggccgaccg tatgcgaact ggaaggcccg
     1561 ataccgattt tgaaaatatc aaaaatgctg accatggttt tgctccgaaa ggcggtttca
     1621 gacggcatgg cttccgtttg acaaaccaaa aggagacgcg gcacgatgcc cgtctccttt
     1681 tttaaaacgg cacttatgcg tcgatatttt gggcaatcag cgcgttgttt tcgataaagg
     1741 cgcggcgcgg ttcgacctcg tcgcccatca gggtaacgaa tacttcgtcg gcggcaatgg
     1801 catcttcgat gcgcactttc aacaggcggc gcacggcggg atccatcgtg gtttcccaca
     1861 gctgttcggg gttcatctcg cccaagcctt tgtatcgttg gatggacata cctttttggg
     1921 caacgctcat caagatgtcc aaagcgcctt caaagctgtc gatgtcgtat tcgttgtcgc
     1981 ctttgtagag cttcgcccct ttgccgacca tgcctttaag tgcggcggcg gtttgggtaa
     2041 gggtttgata ggctttgctg ttgaggaact taggctcgag gtagctcacc accacattgc
     2101 cgtgcagctt gcgtgtgatt ttgatgaact ggtgtccttc gtggccttcg atacgttcga
     2161 gcgcgacttc tttttcgtcc aagaggccgt tcaattcggc aacggagcgg tctgcgcttt
     2221 ctgctgtgct gagatcgacc ggcgaagcat gtagcatggc atgcaggacg agttcgtcaa
     2281 tgatgcggct ttcttgctcg atgacggttt tggccaacag gaattgtttg gcggtattgg
     2341 caagctcttc gccttcgatg gtgcggctgt ctgaaacgat tttggctttt tccaaggcta
     2401 aaccgagcag ccattggtct ttttccaatt cgtctttgag atatcgttct tgtttgccgt
     2461 atttggcttt gtataaaggc ggctgggcaa tgtagatgta gccgcgttcg accagctcgg
     2521 gcatttggcg gtagaagaag gtcaggagca gggtgcggat gtgcgcgccg tccacgtcgg
     2581 catcggtcat gatgatgatg cggtggtaac gcagtttttc ggcattgaat tcttctttgc
     2641 cgatgcccgc gcccaacgcg gtaatcaaag cggctacttc ctgactggcg agcatttttt
     2701 caaagcgcgc tttttcgacg ttcaaaatct tgcccttaag cggcaaaatc gcttggaatt
     2761 tgcggtcgcg cccctgcatg gcggaaccgc ctgcagaatc gccctcgacc agataaagtt
     2821 ctgacaatgc ggggtctttt tcttggcagt cggcgagttt accgggtagc cccaagccgt
     2881 ccattacgcc tttgcggcgg gtgatttcgc gggctttgcg ggcggcttcg cgcgcgcggg
     2941 cggcatcgac gattttgccg gtgatgattt tggcttcgtt cgggttttct tcaaggaagt
     3001 cggtcagcgc ttggttgatg acttcgttga caacggggcc gatttcgctg gaaaccagtt
     3061 tgtctttggt ttgggatgag aatttggggt cgggcagttt gacggacaac acgcaggtca
     3121 aaccttcgcg catatcgtcg cctgctgttt ccactttggc ttttttggcg acttcgttgg
     3181 cttcgatgta gctgttgatg gtgcgtgtca tcacttggcg caacgcggtc aagtgcgtac
     3241 cgccgtcgcg ctgagggatg ttgttggtga agcactgcac gctttcttgg tagctgtcgt
     3301 tccactgcat cgcgcattcg acgctcatgc cgtctttctc gccgaacgca tagaagattt
     3361 tttcgtgcaa cggcgttttt ttgcggttca tgtattgcac gaaaccggcc acgccgccgg
     3421 aaagggcgaa gctttcgtgt ttgccgtcgc gttcgtcggt caattcgatg tccacgccgt
     3481 tgttcaggaa ggaaagttcg cgaatgcgtt tggcgaggat gtcgaagctg tattcgacgt
     3541 tgccgaaagt ttccgtgctg gcgaggaagc gtacggtcgt gcctttcttg tcggaatcgc
     3601 cgacaacttt cagcggctct tcggtttcgc cgcgcacgaa gcggacgaag tgttctttgc
     3661 cgtcgcggta gatggtcagc gtaacccagt cggacagcgc gttgacgacg gacacgccca
     3721 cgccgtgcag gccgccggag attttgtagc tgttgttgtc gaatttaccg cccgcgtgca
     3781 agacggtcat gatgacttcg gcggcggagc gtccttcttt cgggtggatg ccggtgggca
     3841 taccgcgccc attgtcggcg acgctgacgg aatggtcggc gtggatggta acggtgattt
     3901 tgtcgcaatg tccggcgagt gcttcgtcaa tggcgttgtc caatacttcg aacaccatgt
     3961 ggtgcaggcc gctgccgtcc tgcgtgtcgc cgatgtacat accggggcgt ttgcgtaccg
     4021 cttccaagcc ttcgagcacc tgaatgctgt cggcgccgta ttcttcgtgt ttttgttcag
     4081 tcatattttt tgccggattt tgaaaagatt ttgcgatgcc gccaaaacaa gtccgcacct
     4141 tgtggaaaaa gcgggcggga cgacatatat aattgtgtat tatagccgat tttgccgcct
     4201 aattcagcgt tatccgcatc agtgtgccgc cgggaaaaga tgaaacggta cgtttgcctc
     4261 cggcatcagg tcggggattg tcccgtaaag tggcaaaagc gtttttttgc cactaaaatc
     4321 tacaccctat acttttcgga caggggcgcg gaaatggaaa tatggaatat gttggacact
     4381 tggctcggtg ccgtcccgat acgtgcggag gcggtcgaat ccgtggcggt ggtcgcggct
     4441 ttgctgctgg cgcgcgccct tctgttgaat atccacttca aacggcatcc ggatttcggc
     4501 atcgaaagca agcggcggtt tttggttgcc agccgcaata taacgctgct tttggtgctg
     4561 ttttcgctgg catttatctg gtcggcgcaa atccaaacgc tggctttgtc gatgtttgcg
     4621 gtggcggcgg cggtcgtcgt ggcgacgaag gaactgatta tgtgtctgtc gggcagtatt
     4681 ttaaggtctg ccacccagca atactcggtc ggcgactata tcgaaatcaa cggcctgcgc
     4741 gggcgcgtgg tcgacatcaa cctgttgaac acgctgatga tgcaggtcgg tccgaacccc
     4801 ttggtcggac agcttgcggg aaccaccgtt tctttcccca acagcctgtt gttgagccac
     4861 cccgtgcgcc gcgacaatat tttgggcgac tatgtcatcc atacggtcga aatccccgtt
     4921 cccatccatt tggattcgga tgaagccgta tgccgtctga aagccgtact cgagcccttg
     4981 tgcgcgccct acatccccgc catccaacgg catttggaaa acgtgcaggc ggaaaaactg
     5041 tttatcacgc ccgccgccag accgcgcgtt acccgcgtgc cgtacgatga caaggcatac
     5101 cgcatcatcg tccgcttcgc ctcccccgtt tcaaagcggc tggaaatcca acaggcggtt
     5161 atggacgaat ttttgcgcgt acaataccgc ctgttaaatt accccgccgg ctccgaaaca
     5221 ctttaacttt ccccgaccga ccccatttcc ggcttcagac ggcatattgc cgatatgctg
     5281 tctgaagcac aacacgcaaa ggaaacccat cttatgactg acaacgcact gctccatttg
     5341 ggcgaagaac cccgttttga tcaaatcaaa accgaagaca tcaaacccgc cctgcaaacc
     5401 gccatcgccg aagcgcgcga acaaatcgcc gccatcaaag cccaaacgca caccggctgg
     5461 gcaaacactg tcgaacccct gaccggcatc accgaacgcg tcggcaggat ttggggcgtg
     5521 gtgtcgcacc tcaactccgt cgccgacacg cccgaactgc gcgccgtcta taacgaactg
     5581 atgcccgaaa tcaccgtctt cttcaccgaa atcggacaag acatcgagct gtacaaccgc
     5641 ttcaaaacca tcaaaaactc ccccgagttc gacaccctct cccccgcgca aaaaaccaaa
     5701 ctcaaccacg atctgcgcga tttcgtcctc agcggcgcgg aactgccgcc cgaacagcag
     5761 gcagaactgg caaaactgca aaccgaaggc gcgcaacttt ccgccaaatt ctcccaaaac
     5821 gtcctagacg cgaccgacgc gttcggcatt tactttgacg atgctgcacc gcttgccggc
     5881 attcccgaag acgcgctcgc catgtttgcc gctgccgcgc aaagcgaagg caaaacaggc
     5941 tacaaaatcg gtttgcagat tccgcactac ctcgccgtca tccaatacgc cgacaaccgc
     6001 gaactgcgcg aacaaatcta ccgcgcctac gttacccgcg ccagcgaact ttcagacggc
     6061 ggcaaattcg acaacaccgc caacatcgac cgcacgctcg caaacgccct gcaaaccgcc
     6121 aaactgctcg gcttcaaaaa ctacgccgaa ttgtcgctgg caaccaaaat ggcggacacg
     6181 cccgaacaag ttttaaactt cctgcacgac ctcgcccgcc gcgccaaacc ctacgccgaa
     6241 aaagacctcg ccgaagtcaa agccttcgcc cgcgaaagcc tgaacctcgc cgatttgcaa
     6301 ccgtgggact tgggctacgc cagcgaaaaa ctgcgcgaag ccaaatacgc gttcagcgaa
     6361 accgaagtca aaaaatactt ccccgtcggc aaagtattaa acggactgtt cgcccaaatc
     6421 aaaaaactct acggcatcgg atttaccgaa aaaaccgtcc ccgtctggca caaagacgtg
     6481 cgctattttg aattgcaaca aaacggcgaa accataggcg gcgtttatat ggatttgtac
     6541 gcacgcgaag gcaaacgcgg cggcgcgtgg atgaacgact acaaaggtcg ccgccgtttt
     6601 tcagacggca cgctgcaact gcccaccgcc tacctcgtct gcaacttcgc cccgcccgtc
     6661 ggcggcagag aagcgcgttt gagccacgac gaaatcctca tcctcttcca cgaaaccgga
     6721 cacgggctgc accacctgct tacccaagtg gacgaactgg gcgtgtccgg tatcaacggc
     6781 gtagaatggg acgcggtcga actgcccagc cagtttatgg aaaatttcgt ttgggaatac
     6841 aatgtattgg cgcaaatgtc cacccacgaa gaaaccggcg agcccctgcc gaaagaactc
     6901 ttcgacaaaa tgctcgccgc caaaaacttc caacgcggaa tgttcctcgt ccgccagatg
     6961 gagttcgccc tcttcgatat gatgatttac agcgaagacg acgaaggccg tctgaaaaac
     7021 tggcaacagg ttttagacag cgtgcgcaaa gaagtcgccg tcatccaacc gcccgaatac
     7081 aaccgcttcg ccttgagctt cggccacatc ttcgcaggcg gctattccgc aggctattac
     7141 agctacgcgt gggcggaagt attgagcgcg gacgcatacg ccgcctttga agaaagcgac
     7201 gatgtcgccg ccacaggcaa acgcttttgg caggaaatcc tcgccgtcgg cggatcgcgc
     7261 agcgcggcag aatccttcaa agccttccgc ggccgcgaac cgagcataga cgcactcttg
     7321 cgccacagcg gtttcgacaa cgcggcctga cggcaagggt gaagtaaaaa ataggaggat
     7381 tcgatataaa aacatccgca ccgtcattcc cgcgtaggcg ggaatccaga ccggtcggca
     7441 cggaaactta tcggataaaa cggtttcttt agattttacg ttctagattc ccgctttcgc
     7501 gggaatgacg cggaaaagtt gctgtgattt cggataaatt ttcgcaacgt ttaatttccg
     7561 ttttacctga taaatgcccg caatctcaaa tcccgtcatt ccccaaaaac aaaaaaaatc
     7621 aaaaacagaa atcccgtcat tcccgcgcag gcgggaatcc aggtctgtcg gtgcggaaac
     7681 ttatcggata aaacggtttc tttagatttt acgttctaga ttcccgcttt cgcgggaatg
     7741 acggaatatt tttgaatttg ataaaaatgc cgtctgaaac ggtcaaacaa cgcttcagac
     7801 g
//
LOCUS       DAWITQ010000092         7584 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.092, whole genome shotgun sequence.
ACCESSION   DAWITQ010000092 DAWITQ010000000
VERSION     DAWITQ010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7584)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7584)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7584
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.092"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(52..360)
                     /locus_tag="WIX18_001452"
     CDS             complement(52..360)
                     /locus_tag="WIX18_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238546.1"
                     /translation="MTNNVDLKVPAKRYFTLDELCGLLQISPYGFAQWQHDHGVVVGY
                     GGERYTRLDVVKLLKLQSTFAPYAEGAESGSDGNRPVTLQEIGDGLKELLADLDKELC
                     "
     gene            complement(344..646)
                     /locus_tag="WIX18_001453"
     CDS             complement(344..646)
                     /locus_tag="WIX18_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002641098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HEZ5238547.1"
                     /translation="MTLTKAELADILVDKVSNVTKNDAKEIVELFFEEIRSTLASGEE
                     IKISGFGNFQLRDKPQRPGRNPKTGEEVPITARRVVTFHASQKLKSMVEHYYDKQR"
     gene            complement(720..3083)
                     /locus_tag="WIX18_001454"
     CDS             complement(720..3083)
                     /locus_tag="WIX18_001454"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEZ5238548.1"
                     /translation="MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFAG
                     VVIAEVKSVEKHPDADRLNVTRVDAGTGGLVQIVCGAPNVKAGIKVPCSLPGAVLPGN
                     FKIKPTKMRGVPSNGMLCSTNELGLPDDGVDGLHILPEDAPVGTNIREYLDLDDTLFT
                     LKITPNRADCLSIKGIAREVSALTGCAFRQPEIHTAPITGSRKQPVQINAPADCGRFI
                     SRVIENVNAKAATPDWMKQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGS
                     LHIRRAREGETLECLNEKTVSLSENTLVVADEKGVLSLAGLMGGAASAVSDGTQNIVL
                     EAAWFAPEIIAGKSRQYGFGSDSSFRFERGVDYRLQADAMERATELVLQICGGAAGEM
                     VEAQGKLPEAKQVGLRLDRLKTVLGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSF
                     RFDIEIEADLIEEIGRVYGYENIPDDYTSGRLKMLELPETRRPRFAVYNEMAAHGYRE
                     VVSYAFVDEQWEQDFAANADPIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRV
                     RVFEIARVFGKGSDGRFVQNERIGGLWYGAAMPEQWGGKTRNADFYDIKADVENLLKN
                     KAVEFVKTGHPALHPGRAANIVSDGKVIGFVGELHPKWLQKYDLPQAPLVFEIDMAAV
                     LECGKTRYRAVSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGT
                     GLPEGMKSVAVKVILQDMENTLTDEAVEPLIGKLIGAATAAGARLRS"
     gene            complement(3108..3758)
                     /locus_tag="WIX18_001455"
     CDS             complement(3108..3758)
                     /locus_tag="WIX18_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEZ5238549.1"
                     /translation="MITISNEDNMILMSRYPDKYFDLAIVDPPYGILNKTKRGGDYKF
                     NMNEYSQWDIKPDQTYFNELFRVSKNQIIWGGNYFGELWLRSEYNKGFIIWDKNQPET
                     LNNFSMAEMAWSSFDRPSKIFRFSVRKNRNKTHPTQKPVELYQWLLKMYAKQGDKILD
                     THLGSGTLAIACCIAQFDLTACEINSDYYQQSIEKIKNNLPEARISFGHPGYCIIE"
     gene            complement(3755..5224)
                     /locus_tag="WIX18_001456"
     CDS             complement(3755..5224)
                     /locus_tag="WIX18_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HEZ5238550.1"
                     /translation="MTTARWVIDKHLQNFHILCKFAGILKTNSFISVEDKAKLSEKLE
                     KLDLYHRRNTGKSLDATTHKIKELSFYMFGYRDVCGQVTQKFLFSPLGNLFLKHLDNN
                     EYIQKIFLTMLWAIPFPHPYIKTDESIQLYPMRLIFKLLSDERLDCKLFSYEYIYLIS
                     FVKSADQNSYEKLVQDILVLRTCAEVKIKHQLTAENSRSHAYVNAAHEWESYFSKTLT
                     DAGVLQKTDGKIICRLKHGKTETYRKVTSSEFSIPKQLQEFVKKLQSAYSFSEMPLNL
                     NDSDRLKIDVIKEIYSFYPKELLEEIGELKDEAAYELLHLPRLIEQYADNNNGTEAYL
                     FEDVLEMGFNMFYNVEAKKIGGPGNTDLECLYITQKRKFAVEAKSTKNKLSGINSGRL
                     EDHKNKIKAIYTIVVTPRYVPAVLSDIRNCPIVIIRANTFAEFLYNCLINRSSIPEID
                     YRYFDEIIIKNLGKDISSEISNLTMQQFASNTTMEAYST"
     gene            complement(5227..6285)
                     /locus_tag="WIX18_001457"
     CDS             complement(5227..6285)
                     /locus_tag="WIX18_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HEZ5238551.1"
                     /translation="MMIGASLFSSAGIAETYLHNAGIKIIAANELVPERANLYKALYP
                     ESKMIIGDILHEEVFQNLIQSVPNRLDFLIASPPCQGMSVAGKNRNIQEMANDKRNHL
                     IFRVIEFILLKRPTFVLIENVPFFLKIKLPYKGTLQTVEVILQDLFGCEYYIQTHIFD
                     SADYGVAQHRKRAIIRMNKHSTIWGMPEKVTKTISVRDAISFLPSIESGQKSNVKWHF
                     ARTHAPEHIIWLKNTPTGRSAFDNIEHYPKKKNGEKIKSYNTTYRRMEWDAPAPTITI
                     RNDAISSQLNVHPGRSMPDGTYSDARVLTPLELMLLTSLPIDWNIPDDTSELLIRQCI
                     GESIPPLLIKKIVERIGK"
     gene            complement(6468..7460)
                     /gene="pheS"
                     /locus_tag="WIX18_001458"
     CDS             complement(6468..7460)
                     /gene="pheS"
                     /locus_tag="WIX18_001458"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEZ5238552.1"
                     /translation="MENVNRIVAEGIAAVEAAQDFNALEQIKARYLGKTGELTGLLKT
                     LGQMSPEERKTIGAHINECKNRFQTAFNAKRDALNEAKLQARLAAEALDITLPGRAQE
                     GGSLHPVTLTLQRVVELFHGMGFEVADGPEIEDDFHNFQALNIPANHPARAMQDTFYV
                     ENGDVLRTHTSPIQIRYMLDKKEPPIRIIAPGRVYRVDSDATHSPMFHQAEGLWVEEG
                     VTFADLKAVFTDFIRRFFERDDLQVRFRPSFFPFTEPSAEIDIMGENGKWLEVGGCGM
                     VHPNVLKNVNIDSEKYTGFAFGIGLDRFAMLRYNVNDLRLFFDNDLNFLKQFVK"
BASE COUNT         2072 a         1802 c         1491 g         2219 t
ORIGIN      
        1 ttttttagcg tgtaaaacaa aaccggctgc atacctgcaa ccggcctcaa atcagcacaa
       61 ttccttatcc aaatccgcca acagctcttt cagaccgtct ccgatttcct gaagcgtaac
      121 cggacggttg ccgtccgaac ccgattccgc accttctgca tacggtgcaa acgtgctctg
      181 caatttcaac agtttcacca catccaaacg ggtgtagcgt tcgccgccgt aaccgacaac
      241 cacaccgtga tcatgctgcc attgcgcaaa accatagggg ctgatttgca acagtccgca
      301 caactcgtcc agcgtgaaat agcgttttgc gggaaccttc aaatcaacgt tgtttgtcat
      361 agtagtgttc caccatgctt ttgagtttct ggctggcatg gaaagttacc acgcggcggg
      421 cggtaatcgg cacttcctcg ccggttttag ggttacgacc cgggcgttgc ggcttgtcgc
      481 gcaactggaa atttccgaaa ccggaaattt tgatttcttc gccgcttgcc aaagtgctgc
      541 ggatttcttc aaaaaagagt tcgacgattt ctttggcatc gtttttggtg acgttgctga
      601 ctttgtctac caaaatatcg gccagttctg ctttagtgag agtcatatga ttaccttctg
      661 ttgtaacagt tgtggattat taccaatttt tatttaaaat tcaagcgaat atttattttt
      721 taactgcgaa gccgcgcccc tgccgccgtt gccgcgccaa tcagttttcc gataagcggc
      781 tcgaccgcct catccgtcag cgtgttttcc atatcctgca aaatcacttt gaccgccacg
      841 ctcttcatcc cttcgggcag tcccgtgccg cgatacacgt caaacacgct gatttcctgt
      901 accaacttgt ttgccgcgcc tttcaagaca agcagcaaat catcatggct catagcttcc
      961 ggcatcacaa acgccaaatc gcggcgcacc ggctggaatt tcgatacggc ccgatagcgc
     1021 gttttcccgc attccaacac ggccgccata tcgatttcaa ataccagcgg cgcttgcggc
     1081 aggtcgtatt tttgcagcca tttcggatgc agttcgccga caaagccgat gactttgccg
     1141 tctgaaacga tattggcggc acgtccggga tgcagggcgg gatgtccggt tttaacgaac
     1201 tcgactgctt tgtttttcaa cagattttcc acatctgcct taatgtcgta aaaatccgca
     1261 ttgcgcgttt tcccacccca ttgttcgggc attgccgcgc cgtaccacag accgccgatg
     1321 cgttcgtttt ggacaaaccg gccgtctgaa cctttgccga acacgcgggc gatttcaaac
     1381 acgcgcacgc ggttttgttt gcggttcagg ttgttttgca aaatttccac caagccgccg
     1441 atgagtgtgg aacgcatcac ggcatattgc gccgccagcg ggttttgcag gcggatgggg
     1501 tcggcgttgg cggcaaaatc ttgttcccac tgctcgtcaa cgaaggcata gctgaccact
     1561 tcgcggtagc cgtgcgccgc catttcgttg taaacggcaa aacgcgggcg gcgtgtttcg
     1621 ggcagttcca gcattttcag acggcctgac gtgtaatcgt cggggatgtt ttcatagccg
     1681 taaacgcgtc cgatttcttc aatcaaatcg gcctcaattt cgatgtcaaa acggaagctc
     1741 ggcgcggtaa cgcggaagcc ttccgccgtt ttctcgggct gcaggcccaa gtgttgcaaa
     1801 atggtttcca cctgttcggc aggaatgtcc acgcccaaca cggttttcag acggtccaaa
     1861 cgcagtccga cctgcttggc ttcgggcaat ttaccttgtg cttcaaccat ctcgcctgcc
     1921 gcaccgccgc aaatctgcaa caccaattcg gtagcacgtt ccatggcatc cgcctgcaaa
     1981 cggtaatcca cgccgcgctc gaagcggaac gacgaatccg aaccgaaacc gtattggcgc
     2041 gatttgccgg cgatgatttc gggcgcaaac caagccgctt ccagcacgat attttgcgtg
     2101 ccgtctgaaa ccgcgctcgc cgcgccgccc attaagcccg ccaaactcaa cacgcctttt
     2161 tcgtccgcca cgaccagcgt gttttcagac agggaaacgg ttttctcgtt caggcattcc
     2221 agcgtttccc cttcgcgcgc gcggcggatg tgcaggctgc cggaaagttt gtcggcatca
     2281 aaaacgtgca tcggctgacc gatttccagc atcacataat tgccgatgtc caccagcgcg
     2341 gaaatactgc ggatgccgct acgctccaaa cgttgtttca tccaatcggg agtagccgct
     2401 ttcgcattga cattttcaat aacgcggctg ataaaacggc cgcaatcggc aggcgcgtta
     2461 atctgcacgg gctgttttcg actgcccgtg atcggcgcgg tatggatttc gggctgcctg
     2521 aacgcgcacc ccgtcaatgc ggacacttcg cgcgcaatgc ctttgatgct caagcagtcg
     2581 gcgcggttag gcgtaatttt caacgtaaac agcgtatcgt ccaaatccaa gtattcgcgg
     2641 atattggtac cgacgggcgc atcttcaggc agaatgtgca ggccgtctac accatcatca
     2701 ggcaaaccta gttcattggt cgaacacagc ataccgtttg atggcacacc gcgcattttg
     2761 gtcggcttga ttttgaaatt acccggcaaa acggcacccg gcagcgaaca cggcactttg
     2821 atgcccgctt tcacattcgg cgcaccgcac acaatctgca ccaacccgcc cgtacccgca
     2881 tcaactcggg taacgttcaa acggtctgca tccggatgtt tttcaacgga tttcacttcg
     2941 gcaatcacca cgcccgcaaa cgcaggcgcg gcagtttcag cctcttccac ttccaagccg
     3001 gacatcgtta acagatgttc cagcttatcg gaggaaagtt cggtatcggc ttgggttttc
     3061 agccatgagt aggagaattg catggttaat ttctctatat ttttaagtta ttcaataata
     3121 caataacctg gatgcccaaa actgattcta gcttcaggta aattattttt tattttctca
     3181 atcgattgtt ggtaataatc ggaattgatt tcacaagctg tcaaatcaaa ctgtgcaatg
     3241 cagcatgcaa tagcaagagt tccacttcct aaatgtgtat ctaaaatctt atcaccctgc
     3301 tttgcataca tttttaacaa ccactgatat aattcgactg gtttttgtgt tgggtgagtt
     3361 ttattacgat ttttccgcac actaaaccgg aaaattttag atggcctatc gaatgacgac
     3421 caagccattt ccgccataga aaaattattt aatgtctctg gttgattctt atcccaaata
     3481 ataaatcctt tattatattc acttctcaac cataactcgc caaaataatt cccaccccaa
     3541 ataatttgat tttttgacac gcgaaataat tcattaaagt aagtttggtc tggcttaata
     3601 tcccattgtg agtattcatt catattgaat ttataatcac caccacgttt agttttattc
     3661 aaaatcccat aaggaggatc tacaattgcc aaatcaaaat acttgtcagg ataccgagac
     3721 attaagatca tgttatcttc atttgaaata gttatcatgt actatacgct tccattgtgg
     3781 tgttacttgc aaactgttgc atagtcaaat tggaaatttc tgaactaata tcttttccaa
     3841 gatttttaat aataatttca tcaaaatacc gataatcaat ctctggaata ctggagcgat
     3901 taatcaaaca attatataaa aattcagcaa atgtattggc acgaataatt acaattgggc
     3961 aattacgaat atcggataat acggcaggga cataacgtgg tgtgacaaca attgtgtaaa
     4021 tggccttaat tttattttta tgatcttcca atcttcctga attaatacct gataacttat
     4081 ttttagttga ttttgcctcc actgcaaatt ttctcttttg cgtaatatat aagcactcta
     4141 aatccgtatt acctggtcca ccaatttttt tagcttctac gttataaaac atattgaacc
     4201 ccatttctag aacatcttca aatagatatg cctctgttcc attattatta tctgcatatt
     4261 gttcaatcaa cctaggtaag tgcaataatt catatgctgc ttcatcctta agctcaccaa
     4321 tttcctccaa taactctttt ggatagaagc tataaatttc cttaatgaca tcaattttca
     4381 aacgatcact atcgttcaga tttaatggca tttctgaaaa cgaataagca ctttgcaatt
     4441 ttttcacaaa ttcctgaagt tgcttaggaa tcgaaaactc acttgatgtt actttacgat
     4501 atgtttcggt cttaccatgc tttagacggc aaataatttt accatctgtt ttttgcaaaa
     4561 cacctgcatc agtcaatgtt tttgaaaaat aagattccca ctcatgtgct gcatttacat
     4621 aagcatgact acgactattt tccgcagtta attgatgttt aatttttact tcagcacatg
     4681 ttcgtaacac caaaatgtct tgtactaatt tttcatagct attctgatca gcagatttca
     4741 caaatgaaat taaatagata tattcataag aaaatagttt acaatccaat ctttcatcag
     4801 ataacaactt aaatattagt ctcatgggat ataattgaat actttcatca gtcttaatgt
     4861 acggatgagg aaatggtatc gcccacaaca tagtaagaaa aattttttga atatattcat
     4921 tattatccaa gtgtttcaaa aataaattac ccaatggact gaacaggaat ttctgtgtaa
     4981 cttgcccaca cacatcacga taaccaaaca tatagaatga taattctttt attttatgag
     5041 tagtagcatc caatgattta cctgtatttc gtctatggta taaatctagt ttttccaatt
     5101 tttcagataa cttagcttta tcctctacag atataaaaga atttgttttc aaaatacctg
     5161 caaatttaca taaaatatga aaattctgta aatgtttatc tattacccag cgcgcagttg
     5221 tcatatctat tttcctattc tctctacaat ttttttaatt aacaatggag gaatagattc
     5281 accaatacat tgccgaatta ataattctga tgtatcgtcg ggaatattcc aatcaatagg
     5341 taatgatgtt aaaagcatta actctaatgg tgttaaaact cttgcatctg aatatgttcc
     5401 atcaggcata gaccgtccag gatgaacatt taattgtgaa ctgatagcgt cattacgaat
     5461 agtaatagtt ggggcaggag catcccactc catacggcga taagttgtat tataactttt
     5521 aattttttca ccattttttt tctttggata atgttctata ttatcaaaag cagatcgtcc
     5581 tgttggcgta ttttttagcc atataatgtg ctccggagca tgtgtacgtg caaaatgcca
     5641 tttcacatta gacttttgtc cagactcaat actaggcaaa aaactaatag catcacgaac
     5701 agaaatggtt tttgtaactt tttccggcat tccccaaata gttgaatgtt tattcatacg
     5761 aataatagct cgtttacgat gttgtgcaac accataatcg gcagaatcaa aaatatgagt
     5821 ttgaatataa tattcgcaac caaataaatc ttgcaaaatt acttctactg tttgtaatgt
     5881 ccccttataa ggtaacttaa tttttaaaaa aaatggaaca ttttcaatca aaacaaaagt
     5941 tgggcgtttt aataaaataa attcgattac tctgaatatt aaatgattac gtttatcatt
     6001 agccatctct tgaatgttac gatttttccc tgcaacactc atgccttgac aaggaggaga
     6061 agcaattaaa aaatctaatc gattcggcac gctctgtatt aaattttgaa acacttcctc
     6121 atgaagtata tcacctataa tcattttact ttcgggatat agagctttat ataaattagc
     6181 acgttctggc accaattcat ttgcagctat aatcttaata cccgcattat gcaagtaggt
     6241 ttctgcaatc cctgcactcg aaaacaaaga agcccctatc atcatagaac caaacccaaa
     6301 ttaactatat aatctctaca aagcaataaa ttatgcctct ttaaacaaaa ttaggaatgt
     6361 aatttcacaa caaaatatca aatgttttat atcttacatt tgaattttcc taagcagcct
     6421 gaaaaccaag agtaggctgc ttttccatat tcaggcagcc tacacaatca ttttacaaac
     6481 tgcttcaaaa aattcaaatc gttatcaaaa aacaagcgca aatcgttcac gttgtaacgc
     6541 agcatcgcga aacggtcgag accgataccg aaagcgaaac cggtgtattt ttcagaatcg
     6601 atattcacat ttttcaacac gttgggatgc accatgccgc agccgccgac ttccagccat
     6661 ttgccgtttt cgcccataat gtcgatttcg gcagacggtt cggtgaacgg gaagaaagac
     6721 gggcggaaac gtacttgcaa atcatcgcgt tcaaagaagc gacggataaa atccgtgaac
     6781 actgctttca aatcggcaaa agttacgccc tcttctaccc acaaaccttc cgcctgatgg
     6841 aacataggcg agtgcgtggc atcgctgtcc acacggtaaa cgcggccggg ggcgataatg
     6901 cggatgggcg gctctttttt atcgagcata tagcggattt gaatcgggga agtgtgcgta
     6961 cgcaaaacat caccgttttc aacgtaaaac gtatcctgca tcgcacgggc aggatggttt
     7021 gcagggatgt tcagggcttg gaaattgtga aaatcgtctt cgatttcagg cccgtccgcc
     7081 acttcgaaac ccattccgtg aaagagttcg accacacgtt gcaaggtcag ggttacggga
     7141 tgcaggctgc cgccttcctg agcgcgtccg ggcagggtaa tgtcgagggc ttcggcggca
     7201 agtcgggctt gcagcttggc ttcgttgagg gcatcgcgtt tggcattaaa agccgtctga
     7261 aaccggtttt tgcattcatt gatatgcgca cctatggttt tgcgctcttc aggcgacatt
     7321 tgccccaaag ttttcagaag tccggtcaac tcgccggttt tgccaagata acgggctttg
     7381 atttgttcta gagcgttgaa gtcttgcgca gcttctactg cggcaatgcc ttctgcaacg
     7441 atgcggttta cattttccat aatatcaagt ctgtcaatta atgatatgcc acctgaaaca
     7501 acgaggccgc ctgtatagcc tgacatatca gactcttcag acgaccttat tttcttcacg
     7561 gtcaatccat tggataaatt ttct
//
LOCUS       DAWITQ010000093         7549 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.093, whole genome shotgun sequence.
ACCESSION   DAWITQ010000093 DAWITQ010000000
VERSION     DAWITQ010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7549)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7549)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7549
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.093"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            24..419
                     /locus_tag="WIX18_001459"
     CDS             24..419
                     /locus_tag="WIX18_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HEZ5238553.1"
                     /translation="MFGLHKSFGFLTLTVITLRIVWAVANRAKRPQSDSKAAAAGHGI
                     LYLLMLAVPVIGMIRQYGSGRGPLKVFGVEVMQGSPEKIEWMANLGNTFHGNLGWLLF
                     AAVAGHVAMVVTHRVQGRDVLCRMTGRVR"
     gene            complement(444..1319)
                     /gene="rsmI"
                     /locus_tag="WIX18_001460"
     CDS             complement(444..1319)
                     /gene="rsmI"
                     /locus_tag="WIX18_001460"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEZ5238554.1"
                     /translation="MFQKHLQKASDSVVGGTLYVVATPIGNLADITLRALAVLQKADI
                     ICAEDTRVTAQLLSAYGIQGKLVSVREHNERQMADKIVGYLSDGMVVAQVSDAGTPAV
                     CDPGAKLARRVREVGFKVVPVVGASAVMAALSVAGVAGSDFYFNGFVPPKSGERRKLF
                     AKWVRAAFPIVMFETPHRIGATLADMAELFPERRLMLAREITKTFETFLSGTVGEIQT
                     ALAADGNQSRGEMVLILYPAQDEKHEGLSESAQNVMKILAAELPTKQAAELAAKITGE
                     GKKALYDLAVSWKNK"
     gene            1373..1720
                     /locus_tag="WIX18_001461"
     CDS             1373..1720
                     /locus_tag="WIX18_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HEZ5238555.1"
                     /translation="MRLNHKQGEAGEDAALAFLQSQGCTLLARNWHCAYGEIDLIVKN
                     GGMILFVEVKYRKNRQFGGAAYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVLIE
                     GSRPPEWIQNITG"
     gene            1725..2318
                     /locus_tag="WIX18_001462"
     CDS             1725..2318
                     /locus_tag="WIX18_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoheptose isomerase"
                     /protein_id="HEZ5238556.1"
                     /translation="MTTLQERVAAHFAESIRAKQEAGKVLVEPTVQAAELMLQCLMND
                     GKILACGNGGSAADAQHFAAEMTGRFEKERMELAAVALTTDTSALTAIGNDYGFNHVF
                     SKQVRALGRAGDILVGISTSGNSANVIEAIKAAHERDMHVIALTGRDGGKIAAILKDT
                     DVLLNVPHPRTARIQENHILLIHAICDCIDSVLLEGM"
     gene            2382..2990
                     /locus_tag="WIX18_001463"
     CDS             2382..2990
                     /locus_tag="WIX18_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HEZ5238557.1"
                     /translation="MKPKPHTVRTLIAAIFSLALSGCVSAVIGSAAVGAKSAVDRRTT
                     GAQTDDNVMALRIETTARSYLRQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFV
                     GQIARSEQAAEGVYNYITVASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIVT
                     YGNVTYVMGILTPEEQAQITQKVSTTVGVQKVITLYQNYVQR"
     gene            2998..3648
                     /locus_tag="WIX18_001464"
     CDS             2998..3648
                     /locus_tag="WIX18_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238558.1"
                     /translation="MPSEPPSDGIARHPKSTIKMAKKPNKPFRLTPKLLIRVVLLICI
                     TAIGALAIGIVSTFNPNGGKTLQTEPQHTDSPRETEFWLPNGVVGQDAAQPEHHHAAS
                     SEPAQPDGTDESGSGLPSPAAPKKNRVKPQPADTAQTDRQPDDAGTQAENTLKETPVL
                     PTNVPRPEPRKETPEKQAQPKETPKEKETPKENHTKPDTPKNTPPKPHKEILDNLF"
     gene            3688..4467
                     /gene="map"
                     /locus_tag="WIX18_001465"
     CDS             3688..4467
                     /gene="map"
                     /locus_tag="WIX18_001465"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEZ5238559.1"
                     /translation="MNGIIIKTPEEIEKMRELGKLVAEALDYIGQFVKPGVTTDEIDK
                     LVYDYHVNVQGGYPAPLHYGNPPYPKSCCTSVNHVICHGIPDDKPLKEGDIINIDLTI
                     KKDGFHGDSSRMFTVGKVSPIAQRLIDVTHASMMAGIEAVKPGATLGDVGYACQQVAE
                     NAGYSVVQEFCGHGIGRGFHEAPQVLHYGKKGQGPVLKPGMIFTVEPMINQGKRHLRI
                     LNDGWTVVTKDRSLSAQWEHEVLVTETGYEILTVSPASGKP"
     gene            4622..4921
                     /locus_tag="WIX18_001466"
     CDS             4622..4921
                     /locus_tag="WIX18_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEZ5238560.1"
                     /translation="MKIFENIEDVKAIRKKTGLNQIDFWGKVGVTQSGGSRYETGRKM
                     PKPVRELLRLVHIECIDLAKVNKKDMEIAALLKKHHPDLYAELSKQTKSERKKQS"
     gene            5159..5533
                     /locus_tag="WIX18_001467"
     CDS             5159..5533
                     /locus_tag="WIX18_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HEZ5238561.1"
                     /translation="MKLLTTAILSSAIALSSMAAAAGTNNPTVAKKTVSYVCQQGKKV
                     KVTYGFNKQGLTTYASAVINGKRVQMPVNLDKSDNVETFYGKEGGYVLGTGVMDGKSY
                     RKQPIMITAPDNQIVFKDCSPR"
     gene            complement(5720..7186)
                     /locus_tag="WIX18_001468"
     CDS             complement(5720..7186)
                     /locus_tag="WIX18_001468"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate:quinone oxidoreductase"
                     /protein_id="HEZ5238562.1"
                     /translation="MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALE
                     SSNAWNNAGTGHSALCELNYAPLGANGIIDPARALNIAEQFHVSRQFWATLVAEGKLE
                     DNSFINAVPHMSLVMNEDHCSYLQKRYDAFKTQKLFENMEFSTDRNKISDWAPLMMRG
                     RDENQPVAANYSAEGTDVDFGRLTRQMVKYLQGKGVKTEFNRHVEDIKRESDGAWVLK
                     TADTRNPDGQLTLRTRFLFLGAGGGALTLLQKSGIPEGKGYGGFPVSGLFFRNSNPET
                     AEQHNAKVYGQASVGAPPMSVPHLDTRNVDGKRHLMFGPYAGFRSNFLKQGSLMDLPL
                     SIHMDNLYPMLCAGWANMPLTKYLLGELRKTKEERFASLLEYYPEANPDDWELITAGQ
                     RVQIIKKDSEKGGVLQFGTEIVAHADGSLAALLGASPGASTAVPLMIRLMHQCFPERA
                     PSWEDRLKELVPGYGIKLNENPERADEIIAYTAKVLDI"
BASE COUNT         1954 a         2287 c         1840 g         1468 t
ORIGIN      
        1 aagaggcgga atgggcgggc agcctgttcg gcctgcacaa atctttcggc ttcctcacgc
       61 tgacggtgat tacattgcgc atcgtgtggg cagttgccaa ccgcgccaag cgtccgcaaa
      121 gcgacagcaa ggctgcggcg gcaggacacg gcattctgta tctgctcatg cttgctgttc
      181 ccgttatcgg catgatccgc caatacggca gcggccgcgg cccgttgaaa gtgttcggcg
      241 ttgaagtgat gcagggttcg ccggaaaaaa tcgagtggat ggcaaacttg ggcaacacgt
      301 tccacggcaa tttgggctgg ctgctgtttg ccgccgtcgc cggacacgtc gccatggtcg
      361 tcacccaccg tgttcagggt agagatgttc tgtgccgcat gacggggcgt gtccgctgat
      421 tccgttcgca ctatggtgcc gcactatttg tttttccacg acactgccaa atcgtacaaa
      481 gcctttttgc cctcacctgt aatcttggcg gcaagctcgg cagcctgttt ggtcggcagt
      541 tcggcagcaa ggattttcat cacattttgc gcggactcgg acaagccttc gtgtttttca
      601 tcctgcgccg gatacagtat caacaccatc tcgccgcgcg attggttgcc gtcggcagcc
      661 aatgccgtct gaatttcccc aaccgtgccg cttaagaacg tttcaaacgt tttcgtgatt
      721 tcgcgcgcca gcatcagacg gcgttcgggg aacagttccg ccatatcggc aagcgtcgcc
      781 ccgatgcggt gcggcgtttc aaacataacg ataggaaacg ccgcccgcac ccatttggca
      841 aacaatttcc tacgttcgcc cgatttcggc ggtacaaaac cgttgaaata aaaatcggat
      901 cccgccacac cagccacact caaagccgcc atcaccgcgc ttgcgccgac aacagggaca
      961 actttaaacc cgacctcacg cacgcggcgg gcgagtttcg cgcccgggtc gcacacggcc
     1021 ggcgtacccg catcggaaac ctgtgccaca accatgccgt ctgaaagata gccgacaatc
     1081 ttgtccgcca tctgccgttc gttgtgttcg cgcacgctga cgagtttgcc ctgaatgccg
     1141 tacgcgctca aaagctgcgc ggtaacgcgc gtgtcttcgg cacagatgat gtccgccttt
     1201 tgcaataccg ccaaagcgcg cagggtaatg tccgccaaat tgccgatggg cgtggcaacc
     1261 acgtataatg tccctccgac gacgctgtcg gaggctttct gcaagtgttt ctgaaacata
     1321 aaaaatgccg tctgaaaaac aaacattata aattataaag gttaaaccga ttatgcgcct
     1381 aaaccacaaa cagggcgagg caggggaaga tgccgcgctt gccttcctcc aatcccaagg
     1441 ctgcacactg cttgcccgca actggcactg cgcctacggc gaaatcgacc tgattgtcaa
     1501 aaacggcggc atgattctgt ttgttgaagt aaaataccgc aaaaatcggc aattcggcgg
     1561 tgccgcatac agcatttccc catccaaatt attgaaactg caacgaagtg tagagtatta
     1621 tctgcaacag aacaggttga caaacgtacc gtgccgcctc gacgcggtac tcatcgaagg
     1681 cagccgcccg cccgagtgga tacagaatat tacaggttga cgatatgacg acattacaag
     1741 aacgcgttgc cgcccatttt gccgaaagca tccgtgccaa gcaggaagcc ggaaaagtat
     1801 tggtcgagcc gaccgtacag gctgccgagc tgatgctgca atgcctgatg aacgacggca
     1861 agattctggc gtgcggcaac ggcggttcgg ctgccgacgc gcagcacttc gccgccgaaa
     1921 tgaccggacg ctttgaaaaa gagcgcatgg aactcgccgc cgtcgccctg accaccgaca
     1981 catccgcgct gaccgccatc ggtaacgact acggcttcaa ccacgtcttc agcaaacagg
     2041 tacgcgccct cggacgcgcc ggcgacatcc tcgtcggcat ttccacttcc ggcaattccg
     2101 ccaacgtcat cgaagccatt aaagcggcac acgaacgcga tatgcacgtc atcgccctga
     2161 ccggccgcga cggcggcaaa atcgccgcca tactcaaaga caccgacgtt ctgctcaacg
     2221 tcccccatcc gcgcaccgcc cgcattcagg aaaaccacat cctgctgata cacgccatat
     2281 gcgactgtat cgactccgta ctgctggaag gaatgtaacc cttttcagac ggcatggcgc
     2341 aaagcaatgc cgtctgaaac gcccaagaaa ggaagccccc gatgaaaccc aaaccgcaca
     2401 ccgtccgcac cctgattgcc gccattttca gccttgccct tagcggctgc gtcagcgcag
     2461 taatcggaag cgccgccgtc ggcgcgaaat ccgccgtcga ccgccgaacc accggcgcgc
     2521 aaaccgacga caacgttatg gcgttgcgta tcgaaaccac cgcccgctcc tatctgcgcc
     2581 aaaacaacca aaccaaaggc tacacgcccc aaatctccgt tgtcggctac aaccgccacc
     2641 tgctgctgct cggacaagtc gccaccgaag gcgagaaaca gttcgtcggt cagattgcac
     2701 gttccgaaca ggccgccgaa ggcgtataca actacattac cgtcgcctcc ctgccgcgca
     2761 ctgccggcga catcgccggc gacacttgga acacatccaa agtccgcgcc acgctgttgg
     2821 gcatcagccc cgccacacag gcgcgcgtca aaatcgttac ctacggcaac gtaacctacg
     2881 ttatgggcat cctcaccccc gaagaacagg cgcagattac ccaaaaagtc agcaccaccg
     2941 tcggcgtaca aaaagtcatc accctctacc aaaactacgt ccaacgctga ctcggcaatg
     3001 ccgtctgaac cgccttcaga cggcattgcc cgacacccca aaagcacaat caaaatggca
     3061 aaaaaaccga acaaaccctt caggctgacc cccaaactcc tgatacgcgt cgtattgctc
     3121 atctgtatca ccgccatcgg cgcattggca ataggcatcg tcagcacatt caacccgaac
     3181 ggcggcaaaa ccctccaaac cgaaccgcaa cacaccgaca gcccccgcga aaccgaattc
     3241 tggctgccaa acggcgtagt cggacaagat gccgcccaac ccgaacacca ccacgccgcc
     3301 tcatccgaac ccgcacagcc ggacggcaca gacgaaagcg gcagcggact gccgtcccct
     3361 gccgcaccca agaaaaaccg ggtcaaaccg caacctgccg acacagctca aaccgacagg
     3421 cagccggacg acgccggaac acaagctgaa aacacactca aagaaacccc cgtactgccc
     3481 acaaacgtcc cccgtcccga accccgaaaa gaaacacccg aaaaacaggc gcagcccaaa
     3541 gaaacaccca aagaaaaaga aacgcccaaa gaaaaccata ccaaaccgga caccccgaaa
     3601 aacacgccgc ccaaacccca taaagaaatt ctcgacaacc tcttctgacc cggcacggca
     3661 ggcacacccg caatccaagg aagcattatg aacggcatca tcatcaaaac ccccgaagaa
     3721 atcgaaaaaa tgcgcgagct gggcaaactc gtcgccgaag ccctcgacta catcggacaa
     3781 ttcgtcaaac ccggcgtaac caccgacgaa atcgacaaac tcgtttacga ctaccacgtc
     3841 aacgtccaag gcggctatcc cgcccccctg cactacggca acccgcccta ccccaaatcc
     3901 tgctgcacct ccgtcaacca cgtcatctgc cacggcattc ccgacgacaa gccgctcaaa
     3961 gaaggcgaca ttatcaacat cgacctcacc atcaaaaaag acggcttcca cggcgactcc
     4021 agccgtatgt ttaccgtcgg caaagtctcc cccatcgccc aacggctgat cgacgtaacc
     4081 cacgcctcca tgatggcggg catagaagcc gtcaaacccg gcgcgacact gggcgacgta
     4141 ggctacgcct gccaacaggt tgccgaaaac gccggctatt ccgtcgtaca ggaattctgc
     4201 ggacacggca tcgggcgcgg tttccacgaa gccccgcaag tgttgcacta cggaaaaaaa
     4261 gggcagggcc ccgttctaaa accgggtatg atttttaccg tcgaaccgat gatcaaccaa
     4321 ggcaaacgcc acctgcgtat cctcaacgac ggctggacgg tggttaccaa agaccgctcc
     4381 ctctccgccc aatgggaaca cgaagtcttg gtgaccgaaa ccggctacga aatcctcacc
     4441 gtcagccccg cctccggcaa accctgaagc cggacgtatc cgccccataa aaacaaacaa
     4501 tgccgtctga aagaaacggc agatatgata tataatataa aaacaggctt gacccggcac
     4561 attacgaaaa caaagcaaat cggaatttgc cccgcaacca gacaaactta aaggaagttt
     4621 tatgaaaata tttgaaaata tagaagatgt taaagccatc cgtaaaaaga ccgggctgaa
     4681 ccagatagac ttctggggca aggtcggcgt tacccagtct ggaggctcgc gctacgaaac
     4741 cggccgcaaa atgcccaaac ccgtacgcga actgctccgc ctcgtccata tcgaatgcat
     4801 cgatttggcg aaagtcaaca aaaaagatat ggaaatcgcc gccctgttga aaaaacacca
     4861 tcccgacctg tatgccgaat tgtccaaaca gaccaagtcc gaaagaaaaa aacaaagtta
     4921 aaccgcaacc tccggatgcc cgaaagtttt tcatttccga aaaacgcaaa caatgccgtc
     4981 tgaaacaccg gacaggtcgc cgtatcccgc ctgccgcccc tgcctcaaac cgccgaaccg
     5041 cccgaacccg cctttttaca aactttatcc aatttcctgt ttatttcagg atacgccgac
     5101 attagaatgt caaacagctc gaaacgggca aactccacat ccatccaaag gaataaaaat
     5161 gaaacttctg accaccgcaa tcctgtcttc cgcaatcgcg ctcagcagta tggctgctgc
     5221 tgccggcacg aacaacccca ccgttgccaa aaaaaccgtc agctacgtct gccagcaagg
     5281 taaaaaagtc aaagtaacct acggcttcaa caaacagggc ctgaccacat acgcttccgc
     5341 cgtcatcaac ggcaaacgcg tgcaaatgcc tgtcaatttg gacaaatccg acaatgtgga
     5401 aacattctac ggcaaagaag gcggttatgt tttgggtacc ggcgtgatgg atggtaaatc
     5461 ctaccgcaaa cagcccatta tgattaccgc acctgacaac caaatcgtct tcaaagactg
     5521 ttccccacgt taatcaggca acaaaaaaca gcgttttcag aaatgaaaac gctgtttttt
     5581 gactgttcca ttattcacaa aagggaaaaa acgattacct gccccgtgta ccaaaacctg
     5641 ccctgccgga tgaagggcat aactggcagg gacggcgtca acaccatatg ggggtacggc
     5701 ttttcttgaa agattcggct taaatatcca atactttcgc ggtataggcg ataatttcat
     5761 ccgccctttc agggttttcg ttcaacttga tgccgtaacc cggtaccagc tctttcagac
     5821 ggtcttccca agacggggcg cgctcgggga agcattggtg catcagccgg atcatcagcg
     5881 gcacagcggt cgatgcgccc ggcgacgcgc ccagcaatgc ggcgagtgag ccgtcggcgt
     5941 gggcgacaat ctccgtacca aactggagca cgccgccttt ttcggagtct tttttaatga
     6001 tttggacgcg ttgccctgcg gtgatgagtt cccagtcgtc ggggtttgcc tcggggtagt
     6061 attccagcag ggaggcgaag cgttcttctt tggttttacg caattcgccc agcaggtatt
     6121 tggtcagcgg catattcgcc cagccggcgc acagcatagg atagaggttg tccatatgga
     6181 tggacagcgg caaatccata agcgagcctt gcttgaggaa gttggaacgg aagcctgcgt
     6241 aagggccgaa cataaggtgg cgtttgccgt ccacgttgcg tgtgtcgagg tgcgggacgg
     6301 acatcggcgg cgcgccgacg gaagcctgcc cgtacacttt ggcgttgtgt tgttcggcgg
     6361 tttcggggtt gctgttgcgg aagaacaggc cggacacggg gaagccgccg tagcctttgc
     6421 cttcggggat gccggatttt tgcagcaggg tcagcgcgcc gccgcccgcg ccgaggaaga
     6481 ggaagcgggt acggagggtg agctgcccgt cggggttgcg ggtatcggcg gttttgagca
     6541 cccacgcgcc gtcggattcg cgtttgatgt cttcgacgtg gcggttgaac tcggttttta
     6601 cgcccttgcc ctgcaaatat ttcaccattt ggcgcgtcag ccgtccgaaa tcgacatccg
     6661 taccttcggc ggagtagttg gcggcgacgg gttggttttc gtcccggccg cgcatcatca
     6721 gcggagccca atcggaaatt ttgttccgat cggtggaaaa ttccatattt tcaaaaagtt
     6781 tttgggtttt aaacgcgtca taacgttttt gaagataaga acaatggtct tcattcatca
     6841 ccaaagacat atgcggcacg gcattgatga aggaattgtc ttccaacttg ccttccgcga
     6901 ccagcgtcgc ccaaaactgg cggctgacat gaaactgttc ggcaatattg agggcgcgcg
     6961 ccggatcgat aatcccattt gcacccaacg gcgcatagtt caattcgcac agcgcggaat
     7021 gccccgtgcc ggcgttgttc cacgcgtttg acgattccaa cgccacatct tccaagcgtt
     7081 caatcagggt gatttcccaa gacggttcga gttctttgag caaaacgccc aaagtcgcgc
     7141 tcataatgcc gccgcccacc aagacaacgt ctgtcgcttc agccatggtt tactcctaaa
     7201 aaacaggcat cttctgccct tatggttatt tgccgtacta caaacgcctg aatcgcaaaa
     7261 gcagggaaaa ccgacaatgg tgtgtgtccg agtatgctgt ttcggggttg gaatgcgttg
     7321 caagtatggc ttccgacacc gcttcagggg cttgtaatat gttatcgtga atgtagtgga
     7381 ttttactggg aaatgcaaag tttttctgtc gcccgccaag tcgggaaact gcgaaatgaa
     7441 aaataaaaat agttatttat ctatatatat caaattttta atagataaaa aatcaaaatt
     7501 gtttatatat taatttttaa aagattgtca gcatattgcg ttaagtttt
//
LOCUS       DAWITQ010000094         7509 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.094, whole genome shotgun sequence.
ACCESSION   DAWITQ010000094 DAWITQ010000000
VERSION     DAWITQ010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7509)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7509)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7509
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.094"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            152..325
                     /locus_tag="WIX18_001469"
     CDS             152..325
                     /locus_tag="WIX18_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HEZ5238563.1"
                     /translation="MKSERRHWEWCVDYDWEGVVRDYRFTHKVEKDERSVIRDAVGVI
                     RKEAGKSLSQPEK"
     gene            389..1672
                     /gene="hemL"
                     /locus_tag="WIX18_001470"
     CDS             389..1672
                     /gene="hemL"
                     /locus_tag="WIX18_001470"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HEZ5238564.1"
                     /translation="MNRNEILFDRAKAIIPGGVNSPVRAFGSVGGVPRFIKKAEGAYV
                     WDENGTRYTDYVGSWGPAIVGHAHPEVVEAVREAALGGLSFGAPTEGEIAIAEQIAKI
                     MPSVERLRLVSSGTEATMTAIRLARGFTGRDKIIKFEGCYHGHSDSLLVKAGSGLLTF
                     GNPSSAGVPADFTKHTLVLEYNNIAQLEEAFAQSGNDIACVILEPFVGNMNLVRPTEA
                     FVKALRELTEKHGAVLIYDEVMTGFRVALGGAQSLHGIMPDLTTMGKVIGGGMPLAAF
                     GGRKDIMECISPLGGVYQAGTLSGNPIAVAAGLKTLEIIRREGFYENLTARTEQLVQG
                     FQTAADAAGIEFAADSVGGMFGLYFAAHAPRNYADMARSNIDAFKRFFHGMLDRGIAF
                     GPSAYEAGFVSAAHTPELIDETVAVAVEVFKAMAA"
     gene            complement(1888..2160)
                     /locus_tag="WIX18_001471"
     CDS             complement(1888..2160)
                     /locus_tag="WIX18_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taxon MazF"
                     /protein_id="HEZ5238565.1"
                     /translation="MPSEAQILHFRRHFYSRLKSKIYTPVIPAQAGIRKVGLVGHEVV
                     LKMKRYRKSDELKEKYSDIDETFEFIKGFIYVIALAFTAYVAIRFF"
     gene            complement(2171..2734)
                     /gene="orn"
                     /locus_tag="WIX18_001472"
     CDS             complement(2171..2734)
                     /gene="orn"
                     /locus_tag="WIX18_001472"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HEZ5238566.1"
                     /translation="MQDKNNLCWLDMEMTGLNPETDRIIEVAMIITDSDLNVLAQSEV
                     YAVHQSDELLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWVPGRATP
                     MCGNSIHQDRRFMVKYMPKLENYFHYRNLDVSTLKELAKRWNPPVAKSVVKRGSHKAL
                     DDILESIEEMRHYREHFLISAPRAEAQ"
     gene            complement(2752..3639)
                     /gene="prmA"
                     /locus_tag="WIX18_001473"
     CDS             complement(2752..3639)
                     /gene="prmA"
                     /locus_tag="WIX18_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEZ5238567.1"
                     /translation="MPYQQITVNVNDAVAERLADALMEHGALSAAIEDAYAGTQNEQA
                     IFGEPGMPAEQIWQQSKVIALFGEHDEAAAIIQTAAQECGLKDLAYTGETLEDQDWVR
                     LTQAQFDPIQISERLWITPSWHEAPEGTAVNLRLDPGLAFGTGSHPTTRLCLKWLDTQ
                     LKNGESVLDYGCGSGILTIAALKLGAGSAVGVDIDEQAVRAGRDNAAQNNVDAQFFLP
                     DGLPQGQFDVVVANILANPLRMLGEMLAARTKQGGRIVLSGLLDEQAEELGGIYSQWF
                     DLDPAETEEGWARLSGVKR"
     gene            complement(3757..5118)
                     /gene="accC"
                     /locus_tag="WIX18_001474"
     CDS             complement(3757..5118)
                     /gene="accC"
                     /locus_tag="WIX18_001474"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEZ5238568.1"
                     /translation="MLKKVLIANRGEIALRVLRACREMGIATVAVHSEADKDSLHVKL
                     ADESVCIGPAASAQSYLNVPAIIAAAEVSCADAVHPGYGFLAENADFAEQVEQSGFTF
                     IGPKPDTIRLMGDKVSAKHAMIAAGVPCVPGSDGALPDDGEEILKIADKVGYPVIIKA
                     SGGGGGRGMRVVEKKEDLLQSVEMTKAEAGAAFGNPMVYMERYLQRPRHVEIQVIADE
                     HGNAIYLAERDCSLQRRHQKVIEEAPAPFITEKERAKIGNACADACKRIGYRGAGTFE
                     FLYEDGEFFFIEMNTRVQVEHPVTELITGVDIVQEQLRIAAGLPLQYKQKDIQVEGHA
                     FECRINAEDPYNFIPSPGPIESCHLPGGFGIRVDSHIYQGYRIPPYYDSLIGKICVHG
                     KTREQAMAKMRVALAELAVTGIKTNTPLHRDLFADAGFQKGGVSIHYLEHWLEDRKAK
                     QDK"
     gene            complement(5232..5687)
                     /locus_tag="WIX18_001475"
     CDS             complement(5232..5687)
                     /locus_tag="WIX18_001475"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEZ5238569.1"
                     /translation="MDLRKLKKLIDLVEESGIAEIEVTEGEEKVRITRTIAAAPVYAA
                     PVPAAAPAVTPAAAPVAASAPAAAPAARDLSDAQKSPMVGTFYRAPGPNAAPFVEVGQ
                     QVKAGDTLCIIEAMKLMNEIEAEKSGTVKEILVENGTPVEFGEPLFIIG"
     gene            complement(5669..5926)
                     /locus_tag="WIX18_001476"
     CDS             complement(5669..5926)
                     /locus_tag="WIX18_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase"
                     /protein_id="HEZ5238570.1"
                     /translation="MRKIKLPAHFPQKPPFFDILLDIYRQLRENKHILTVVFHHRKTV
                     SEHHSARFAPLPQAGCFLKNQRNNPPEHRQPLKEQKWICAN"
     gene            6043..7083
                     /gene="queA"
                     /locus_tag="WIX18_001477"
     CDS             6043..7083
                     /gene="queA"
                     /locus_tag="WIX18_001477"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEZ5238571.1"
                     /translation="MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMPLQDRVFGD
                     LPDYVEAGDVLVFNNTKVMKARLFGQKDSGGRIEALIERVLDNHTALAHIRSSKSPKP
                     GMGLVFEGGIRAVMVGREGELFCLRFEGGQTVYELLEQNGHLPLPPYIERAADADDDS
                     RYQTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIE
                     EHKMHSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTD
                     IFITPGYRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGD
                     AMVLGRNEGVVR"
BASE COUNT         1557 a         1898 c         2233 g         1821 t
ORIGIN      
        1 ggaagaggga atcgcacaaa cggttgttaa aggcaaaacg actcgggcgg aggtagaggc
       61 acgtttcggg aagcgcaacc ctttcggttg ttatgcctat catgaagtca gcctgccgat
      121 ttataatttt ttgccgacca atttcattta tatgaaatca gaacgccggc attgggagtg
      181 gtgtgtggat tacgactggg aaggagttgt ccgggactac cgctttacac ataaagtgga
      241 aaaagacgag cgttccgtca tccgggatgc ggttggcgtc atccgcaaag aagcaggcaa
      301 atccttgtcg caacctgaaa aatgataaaa tgggactttc tgcttctaag cccgaaacct
      361 gccgttcaga cggcatttga ggataaatat gaaccgtaac gaaattttat tcgaccgcgc
      421 caaagccatc atccccggcg gcgtgaattc ccccgtccgc gcattcggca gcgtcggcgg
      481 cgtgccgcgc ttcatcaaaa aagccgaagg cgcgtatgtt tgggacgaaa acggcacgcg
      541 ttataccgac tatgtcggct cttgggggcc tgcgattgtc ggacacgcgc accccgaagt
      601 cgtcgaagcc gtgcgcgaag ccgcgttggg cggtttgtcg ttcggcgcgc ccaccgaggg
      661 cgaaatcgcc attgccgaac aaatcgccaa aatcatgccg tccgtcgaac ggctgcgcct
      721 cgtcagctcc ggtaccgaag cgacgatgac cgccatccgt ttggcacgcg gttttaccgg
      781 tcgcgacaaa atcatcaagt ttgaaggctg ctaccacggg cattccgaca gcctgctggt
      841 gaaagccggc agcggcctgc tgacgttcgg taatccctct tccgccggtg tgcctgccga
      901 ctttaccaaa cacactttag tccttgagta caacaacatc gcccaattgg aagaagcctt
      961 tgctcaaagc ggcaatgaca ttgcctgtgt gattttggag ccttttgtcg gcaatatgaa
     1021 ccttgtccgc ccgaccgaag ccttcgtcaa agccctgcgc gaattgaccg aaaaacacgg
     1081 cgcggtgttg atttacgacg aagtgatgac cggtttccgc gtcgcgctcg gcggcgcaca
     1141 atcgctgcac ggcatcatgc ccgacctgac cacgatgggc aaagtcatcg gcggcggtat
     1201 gccgcttgcc gcgttcggcg ggcgcaaaga cattatggaa tgtatttccc cactgggcgg
     1261 cgtgtatcag gcaggtacat tatcaggcaa cccgattgcc gtcgccgccg gtttgaaaac
     1321 gctggaaatc atccgccgcg aagggtttta tgaaaacctg acggcgcgta ccgaacagtt
     1381 ggttcaaggt tttcagacgg cagcggatgc ggcgggcatc gagtttgccg ccgacagcgt
     1441 gggcggtatg ttcggtctgt atttcgccgc acacgcgccg cgaaactatg ccgatatggc
     1501 gcgttccaat attgacgctt tcaaacgctt cttccacggt atgctcgacc gcggcattgc
     1561 cttcggcccg tccgcttatg aagcaggttt cgtttctgcc gcgcatacgc ccgagctgat
     1621 tgacgaaacg gttgcggttg cggttgaagt gttcaaggcg atggctgcat gatgttttga
     1681 cggacagagt ttctctgttc gatttgtttg gcagattgaa gtaagaatgc acaccgccgt
     1741 cattcccgcg caggcgggaa tccagacctt tcagtttctg taatgattga aaataacggg
     1801 ccgaaatcag ccgcgcccgg caggaagccg ccgccacctg aaacaatgcc gtctgaagcc
     1861 ttcagacggc attttatcgg aagcgcatca gaaaaaacgg atagcgacat atgcggtaaa
     1921 agcaagggca attacataga taaacccctt tataaattca aaagtctcat ctatatcgct
     1981 atatttttct ttcagttcgt cagattttcg ataacgtttc attttcaaga ccacttcatg
     2041 accaacaagc ccgaccttcc ggattcccgc ctgcgcggga atgacgggcg tgtatatttt
     2101 tgatttcaat ctgctgtaaa aatgccgtct gaaatgcagg atttgcgctt cagacggcat
     2161 tttttgtttc ttattgcgct tcggctctcg gggcggaaat cagaaagtgt tcgcggtagt
     2221 ggcgcatttc ttcgatgctc tccaaaatgt cgtccaatgc cttgtgcgaa ccgcgtttga
     2281 cgacgctttt ggcaacgggc ggattccagc gtttggcaag ctctttcagt gtggaaacgt
     2341 caaggttgcg gtagtggaag tagttttcca gtttcggcat atatttgacc ataaaacgcc
     2401 ggtcttggtg gatggaattg ccgcacatcg gcgtggcgcg tccgggtacc cattccgaca
     2461 taaagtccag cagtttctgt tcgacttcgg cttcggtatg cgacgattcg cgcacgcgct
     2521 gcgtcagccc cgtcctgccg tgtgtggcgg tgttccactc gtccatattg tcgagcagct
     2581 cgtcgctttg gtggacggcg taaacttcgg attgcgccaa tacattcaaa tccgagtcgg
     2641 taataatcat cgcgacttcg ataatgcggt cggtttcggg attcagcccc gtcatttcca
     2701 tatcgagcca gcagaggttg tttttgtcct gcacggtgtt tccttttcgt ttcagcgttt
     2761 tacgccgctc aagcgcgccc agccttcttc ggtttccgcc gggtcgaggt cgaaccattg
     2821 gctgtaaatg ccgccgagtt cttcggcctg ttcgtccaac aaaccggaca acacgatgcg
     2881 tccgccctgt ttggtgcggg ctgcgagcat ttcgccgagc atacgcaaag ggttggcgag
     2941 gatgttggcg acaactacgt cgaattgccc ttgaggcaga ccgtcgggca ggaagaattg
     3001 tgcatcgacg ttgttttgcg cggcgttgtc cctgccggcg cggacggcct gttcgtcaat
     3061 atccacgccg acggcggaac ctgcaccgag tttgagggcg gcgatggtca ggatgcccga
     3121 accgcagccg tagtcgagga cgctttcgcc gtttttgagt tgcgtatcca gccatttgag
     3181 gcagaggcgc gtggtcgggt ggctgccggt gccgaaggcg aggccgggat cgaggcggag
     3241 gttgacggca gtgccttcgg gggcttcgtg ccaagagggg gtaatccaca ggcgttcgga
     3301 aatttggatg gggtcgaatt gcgcttgggt caggcgtacc cagtcttggt cttcaagggt
     3361 ttcgccggtg tatgccaagt cttttaatcc gcattcttgt gcggcggttt ggatgatggc
     3421 ggcggcttcg tcgtgttcgc cgaacagggc gatgactttg ctctgctgcc agatttgttc
     3481 ggcgggcata ccgggttcgc cgaaaatcgc ctgttcgttt tgcgtgccgg cgtaggcatc
     3541 ttcgatggcg gcggagagtg cgccgtgttc catcagcgcg tcggcgaggc gttcggcgac
     3601 ggcatcgttg acgttgacgg tgatttgttg gtagggcata acgggctttc ttaacagacc
     3661 ttcggaatag ggtcgtactg tataagggga tgggtgtgta acggaaatgc cgtctgaaaa
     3721 cggacaaact gtttcagacg gcatatcggc ggcggtttac ttgtcctgtt tggctttgcg
     3781 atcttccagc cagtgttcca aatagtggat gctgacaccg cctttttgga aacccgcatc
     3841 ggcgaacagg tcgcggtgaa gcggcgtatt ggttttgatg ccggttaccg ccagctcggc
     3901 gagtgcgacg cgcattttcg ccattgcctg ttcacgcgtt ttgccgtgta cgcagatttt
     3961 gccgatcagg ctgtcgtagt acggtgggat gcggtagcct tggtaaatgt ggctgtccac
     4021 gcggataccg aagccgccgg gcaggtggca gctttcaatc gggcccgggc tggggatgaa
     4081 gttgtatggg tcttcggcgt tgatacggca ctcaaacgcg tggccttcga cttgaatatc
     4141 cttttgtttg tattgcaaag gcaggccggc ggcgatgcgg agttgctcct gcacgatgtc
     4201 cacgccggtg atgagctcgg taaccggatg ctcgacctga acgcgcgtgt tcatctcgat
     4261 aaagaaaaat tcgccgtctt cgtataaaaa ctcaaacgta cccgcgcccc ggtagccgat
     4321 gcgtttgcag gcatcggcac aggcgttgcc gattttggcg cgttcttttt cagtgatgaa
     4381 cggagccggt gcttcctcga tgactttttg gtggcggcgt tgcagcgaac agtcgcgctc
     4441 ggcaaggtag atggcgttgc cgtgttcgtc ggcaatcact tggatttcga cgtggcgcgg
     4501 acgttgcaaa tagcgttcca tgtaaaccat cgggttgccg aatgccgcgc ccgcttcggc
     4561 cttggtcatt tcgacagatt ggaggaggtc ttcttttttc tcgaccacgc gcataccgcg
     4621 accgccgccg ccaccggagg ctttgataat gacgggataa ccgactttat cggcgatttt
     4681 gaggatttct tcgccgtcgt cgggcaatgc gccgtcagaa ccggggacgc agggtacgcc
     4741 tgccgctatc atcgcgtgtt tggcggagac tttgtcgccc atcaggcgga tggtgtcggg
     4801 tttcgggccg ataaaggtaa agccggactg ctcgacctgt tcggcgaaat cggcgttttc
     4861 ggcaaggaaa ccgtagcccg gatggacagc gtccgcgcag cttacttcgg cggcggcgat
     4921 aatggcgggg acgttaaggt agctttgcgc ggaagcggca gggccgatgc acacggattc
     4981 gtcggcgagt ttgacgtgca ggctgtcttt gtcggcctcg gaatgcacgg cgacggtggc
     5041 aatgcccatt tcgcggcagg cacggagtac gcgtaatgcg atttcgcctc ggttggcgat
     5101 taaaactttt ttcagcatga tgactgttcc tgtggttccg gcaacccgtc cgtaaaaaaa
     5161 aaggtgcggg aacgccgaag ggggaaagca tttcagacgg catcggaagt ttatgccgtc
     5221 tgaaaacagg attatccgat gatgaagagc ggttcgccga attcgacggg cgtaccgttt
     5281 tcgaccagaa tttctttgac cgtgccggat ttttcggctt cgatttcgtt catcagcttc
     5341 atcgcttcga tgatgcacag cgtgtcgccg gctttaacct gttggccgac ttcgacaaaa
     5401 ggcgcggcat tcgggccggg tgcgcggtag aacgtgccga ccataggcga tttttgcgcg
     5461 tcggacaaat cgcgggcggc aggtgcggcg gcgggcgcgg atgccgcaac gggtgcggcg
     5521 gcaggcgtta cggccggcgc ggcggcaggt acgggcgcgg cgtaaacggg tgcggcggcg
     5581 atggttcggg tgatgcggac tttttcctcg ccttcggtta cttcgatttc ggcgataccc
     5641 gattcttcaa ccaaatcaat cagttttttt aatttgcgca aatccatttc tgttccttta
     5701 aaggctgccg gtgttccggc gggttgttgc gttggttttt cagaaaacag ccggcttgcg
     5761 gcaacggcgc aaaccgggcg gaatggtgtt cggatacggt tttcctgtgg tggaaaacaa
     5821 ccgtgagaat gtgtttattt tcccgaagtt gtcggtaaat gtccagtaaa atatcaaaaa
     5881 acggcggttt ttgggggaaa tgtgcaggaa gtttgatttt gcgcacaaga tgttccaggt
     5941 taagagtgtt tattctaatc tgttggtttt tcggacaaag atgccgtctg aaaaagggct
     6001 aaagtgcgta taatggcggc ttgcccgaac gagagtgtaa aaatggatat ttcagatttt
     6061 gattttaccc tgcccgaaaa gctgattgcc cagcatccgc ccgaagtgcg cggcagcagc
     6121 cgccttttgg ttgcgttgcc cgatatgccg ctgcaagacc gggtgttcgg cgatttgccg
     6181 gattatgtcg aggcgggcga cgttttggtg ttcaacaaca ccaaagtcat gaaggcgcgg
     6241 ctgtttgggc agaaagacag cggcggcagg atcgaagccc tgattgagcg cgtgttggac
     6301 aaccataccg cactggcgca catccgttcg tccaagtccc ccaagcccgg tatggggctg
     6361 gtgtttgaag gcggcatccg tgccgtgatg gtcgggcgtg agggcgaact gttctgcctg
     6421 cgttttgaag gcggtcaaac cgtttacgaa cttttggaac agaacggaca cctgcccctg
     6481 ccgccttata tcgaacgcgc cgccgacgcg gacgacgaca gccgttatca aaccgtttat
     6541 gccaaatatc agggtgcggt cgccgcgccg acggcgggtc tgcattttac ggaagaactt
     6601 ttgcgccgcc tgaaagacaa aggcgcagta accgcagaag taaccctgca cgtcggtgcg
     6661 ggaacgttcc agcccgtgcg tgtggaaaaa atcgaagaac acaaaatgca cagcgaatgg
     6721 tttgaagtgc cgtctgaaac cgccgccgcc gttgaggcgg caaaagcacg ggggaacaaa
     6781 gtctgggcgg tcggcacgac ttccatgcgc gccctcgaat ctgccgcgcg tgcgacgggt
     6841 cgtctgaaag cggggcaggg cgacaccgat attttcatca cgccgggcta ccgttttaat
     6901 gttgtcgaca ggctggttac caattttcat ttgccgaaat cgacgctgct gatgcttgtc
     6961 agcgcgtttt cgggtatggg tcatatccgc gccgcgtatc gttatgcggt cgaacgcgaa
     7021 taccgtttct tcagctacgg cgatgcgatg gttttggggc ggaacgaagg ggtggtacgt
     7081 tagaacagcc ccaagtctat tgggggaaga caagtgccgt ctgaacggac gttcggacgg
     7141 cattcttttg ttgatttgaa tgaaaggaac tgtatgacat agattcaggc gcgagaggcg
     7201 agaaactcag tcattgttga tgacgcgcaa tacgttaaaa ttcattccgt tttggtcgta
     7261 taaacatatt acatacgcca tttttttgta ttcaaggctg cctgaaaaca gtgggcaaga
     7321 atatctaacc caacgaaaag ctgaaaaagc aacaaaaaat aatctgcacc ttagtcggtt
     7381 ggttagtcca accttagggg tgcagaccat tcaatctttc aggctgcctt tgtttgttta
     7441 taagataaat ttttagccga acactttttc caagtgtgcc tgataatctg ccaagtattt
     7501 ttccacttg
//
LOCUS       DAWITQ010000095         7488 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.095, whole genome shotgun sequence.
ACCESSION   DAWITQ010000095 DAWITQ010000000
VERSION     DAWITQ010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7488
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.095"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            163..1506
                     /locus_tag="WIX18_001478"
     CDS             163..1506
                     /locus_tag="WIX18_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit A"
                     /protein_id="HEZ5238572.1"
                     /translation="MIKIKKGLNLPIAGRPEQVIYDGPVITEVALLGEEYAGMRPSMK
                     VKEGDAVKKGQVLFEDKKNPGVVFTAPVSGKIAAIHRGEKRVLQSVVIAVEGNDEIEF
                     ERYAPEALANLSGEEVRRNLIQSGLWTALRTRPFSKIPAVDAEPFAIFVNAMDTNPLA
                     ADPVVVIKEAAEDFRRGLLVLSRLTERKIHVCKAAGADVPSENAANIETHEFGGPHPA
                     GLSGTHIHFIEPVGANKTVWTINYQDVIAIGRLFATGRLNTERVIALGGSQVNKPRLL
                     RTVLGAKVSQITAGELVDADNRVISGSVLNGAITQGAHDYLGRYHNQISVIEEGRSKE
                     LFGWVAPQPDKYSITRTTLGHFLKNKLFKFTTAVNGGDRAMVPIGTYERVMPLDILPT
                     LLLRDLIVGDTDSAQALGCLELDEEDLALCSFVCPGKYEYGPLLRKVLETIEKEG"
     gene            1509..2741
                     /locus_tag="WIX18_001479"
     CDS             1509..2741
                     /locus_tag="WIX18_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit B"
                     /protein_id="HEZ5238573.1"
                     /translation="MGLKHFLEKIEPHFLPGGKHEKWYALYEAAATIFYTSGAVTRKA
                     AHVRDALDSKRMMILVWLALFPAMFYGMYNVGAQAFGALTPDLLQQSIANDWHYTLAD
                     ALGINMSSEAGVSGKMLFGAIYFLPIYATVFVVGGFWEVLFATVRKHEINEGFFVTSI
                     LFALIVPPTLPLWQAALGITFGVVVAKEVFGGTGKNFMNPALAGRAFLFFAYPANLSG
                     DAVWTAVDGYSGATALAQWAAHGADGLKNAVTGQTITWMDAFIGKLPGSIGEVSTLAL
                     LIGGAFIVFARIASWRIIAGVMIGMIAMSSLFNFIGSDTNAMFAMPWYWHLVVGGFAI
                     GMLFMATDPVSASFTNVGKWWYGALIGVMCVLIRVVNPAYPEGMMLAILFANLFAPIF
                     DYFVAQANIKRRKARSNG"
     gene            2734..3510
                     /locus_tag="WIX18_001480"
     CDS             2734..3510
                     /locus_tag="WIX18_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit C"
                     /protein_id="HEZ5238574.1"
                     /translation="MAKKFDKDSFSGTLIVVLAVSLICSVIVAGAVVGLKPIQEKQKL
                     QDKQGYILSVAGLMDKDTDIGKTFAERIEQRVVDLATGEYVKDAPKDFSARIAGKDPA
                     QSIRIKPEDDLAGIKSRAKYTEVYLVKGEDGKIGQIILPMHGNGLWSVMYGFVAIQPD
                     GNTINGITYYEQGETPGLGGEIGNPLWQQKFVGKKLFDGQGKLALHVGKGAGSDKEHG
                     VDALSGASLTSKGVQGSFAYWFGENGYIPYLNKLKSVGAQ"
     gene            3510..4136
                     /locus_tag="WIX18_001481"
     CDS             3510..4136
                     /locus_tag="WIX18_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit D"
                     /protein_id="HEZ5238575.1"
                     /translation="MADMKRLKHLMFSPFIDNNPIALQVLGICSALAVTTKLQTAIVM
                     GISVALVTGFSSFFISLVRNYIPNSIRIIVQMAIIASLVTLVDQLLQAFAYELSKQLS
                     VFVGLIITNCIVMGRAEAFAMKEPPLESLIDGIGNGAGYGMMLLVVATVRELIGSGKL
                     LGYTVFQTVQDGGWYQTNGLFLLAPSAFFIIGFLIWGLRTWKPEQAEE"
     gene            4140..4733
                     /gene="nqrE"
                     /locus_tag="WIX18_001482"
     CDS             4140..4733
                     /gene="nqrE"
                     /locus_tag="WIX18_001482"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit E"
                     /protein_id="HEZ5238576.1"
                     /translation="MEHYLSLFIKSVFIENMALSFFLGMCTFLAVSKKVSTAFGLGVA
                     VIFVLGLSVPANQLVYSLLKDGAIVEGVDLTFLKFITFIGVIAALVQILEMFLDKFVP
                     ALYNALGIYLPLITVNCAIFGAVSFMAQREYNFGESVVYGFGAGLGWMLAIVALAGIT
                     EKMKYSDAPKGLKGLGITFIAAGLMAMAFMSFSGIQL"
     gene            4747..5964
                     /gene="nqrF"
                     /locus_tag="WIX18_001483"
     CDS             4747..5964
                     /gene="nqrF"
                     /locus_tag="WIX18_001483"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit F"
                     /protein_id="HEZ5238577.1"
                     /translation="MEIILGIVMFTVIVLVLALMILFAKSKLVSEGDITIKVNGEKEL
                     TMPAGGKLLGALANEGIFIPSACGGGGSCGQCRVVVKSGGGDILPTELSHISKREARE
                     GCRLSCQVNVKTDMDIEVPEEVFGVKKWECTVISNDNKATFIKELKLAIPEGEEVPFR
                     AGGYIQIEAPPHTVAYKDFDIPKEYHEDWDKYNLWQYVSKVDEPILRAYSMASYPEEK
                     GIIMLNVRIATPPPRVPDAPPGQMSSYIWSLKPGDKVTISGPFGEFFAKDTDAEMVFI
                     GGGAGMAPMRSHIFDQLKRLNSKRKITFWYGARSKREMFYVEDFDQLAAEFPNFTWHV
                     ALSDPLPEDNWDGYTGFIHNVVYENHLKNHEAPEDCEFYMCGPPIMNQSVIKMLKNLG
                     VEDENILLDDFGG"
     gene            6115..7170
                     /locus_tag="WIX18_001484"
     CDS             6115..7170
                     /locus_tag="WIX18_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEZ5238578.1"
                     /translation="MPSETRLPNFIRVLIFALGFIFLNACSEQTAQTVTLQGETMGTT
                     YTVKYLSNNRDKLPSPAEIQKRIDDALKEVNRQMSTYQPDSEISRFNQHTAGKPLRIS
                     SDFAHVTAEAVRLNRLTHGALDVTVGPLVNLWGFGPDKSVTREPSPEQIKQAASYTGI
                     DKIILKQGKDYASLSKTHPKAYLDLSSIAKGFGVDKVAGELEKYGIQNYLVEIGGELH
                     GKGKNVRGEPWRIGIEQPNIVQGGNTQIIVPLNNRSLATSGDYRIFHVDKSGKRLSHI
                     INPNNKRPISHNLASISVVADSAMTADGLSTGLFVLGETEALKLAEREKLAVFLIVRD
                     KGGYRTAMSSEFEKLLR"
     gene            7196..7411
                     /gene="nqrM"
                     /locus_tag="WIX18_001485"
     CDS             7196..7411
                     /gene="nqrM"
                     /locus_tag="WIX18_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Na+)-NQR maturation NqrM"
                     /protein_id="HEZ5238579.1"
                     /translation="MKTLLLTFGIFLTVIIGMAVGYIFSKRSIKGSCGGITALGMKKM
                     CDCDTPCDTLQKKLDEEKQAGGIRVDR"
BASE COUNT         1829 a         2032 c         1899 g         1728 t
ORIGIN      
        1 acagcttccg caaggaaaaa agcagcaaat ctgacaaaca ggtacaattc ctgatagaat
       61 ctaacacttt gctacattaa tttattcaat gcttttgatg ccacgcgaca cggtatcaaa
      121 acacgccgtt tttaccttaa ccatcacaag taatgcaaat atatgattaa aatcaaaaaa
      181 ggtctaaacc tgcccatcgc gggcagaccg gagcaagtca tttatgacgg gcccgtcatt
      241 accgaagtcg cgttgcttgg cgaagaatat gccggtatgc gcccctcgat gaaagtcaag
      301 gaaggcgatg ccgtcaaaaa aggccaagtg ctgtttgaag acaaaaagaa tccgggcgtg
      361 gtgtttaccg cgccggtttc aggcaaaatc gccgccatcc atcgcggcga aaagcgcgtg
      421 cttcagtcgg ttgtgattgc cgttgaaggc aacgacgaaa tcgagttcga acgctacgcg
      481 cccgaagcgt tggcaaactt aagcggcgaa gaagtgcgcc gcaatctgat tcaatccggt
      541 ttgtggactg cgctgcgtac ccgtccgttc agcaaaatcc ctgccgtcga tgccgagccg
      601 ttcgccatct tcgtcaatgc gatggacacc aatccgctgg cggcagaccc tgtggttgtg
      661 atcaaagaag ccgccgagga tttcagacga ggtttgctgg tattgagccg tttgaccgag
      721 cgtaaaatcc atgtgtgtaa ggcagctggc gcagacgtgc cgtctgaaaa tgctgccaac
      781 atcgaaacac atgaattcgg cggcccgcat ccggccggtt tgagtggcac gcacattcat
      841 ttcattgagc cggtcggtgc aaacaaaacc gtttggacca tcaattatca agatgtaatt
      901 gccatcggac gtttgtttgc aacaggccgt ctgaacaccg agcgcgtgat tgctttgggt
      961 ggttctcaag tcaacaaacc acgcctcttg cgtaccgttt tgggtgcgaa agtatcgcaa
     1021 attactgcgg gcgaattggt tgacgcagac aaccgcgtga tttccggttc ggtattgaac
     1081 ggcgcgatta cacaaggcgc gcacgattat ttgggacgct accacaatca gatttccgtt
     1141 atcgaagaag gccgcagcaa agagctgttc ggctgggttg cgccgcagcc ggacaaatac
     1201 tccatcacgc gtacgaccct cggccatttc ctgaaaaaca aactcttcaa gttcacgaca
     1261 gccgtcaacg gtggcgaccg cgccatggtg ccgattggta cttacgagcg cgtaatgccg
     1321 ctggacatcc tgcctaccct gcttttgcgc gatttaatcg tcggcgatac cgacagcgcg
     1381 caggcattgg gttgcttgga attggacgaa gaagacctcg ctttgtgcag cttcgtctgc
     1441 ccgggcaaat acgaatacgg cccgctgttg cgtaaggtgc tggaaaccat tgagaaggaa
     1501 ggctgattat gggcttgaaa cattttctgg aaaaaatcga accgcacttc ctgccgggcg
     1561 gcaaacatga aaaatggtat gccctctacg aagctgcggc gacgattttc tatacatccg
     1621 gtgcggtaac gcgcaaagcg gcacacgtcc gcgatgcgct cgactccaaa cgcatgatga
     1681 ttttggtgtg gctggctttg ttccctgcca tgttctacgg tatgtacaac gtcggcgcac
     1741 aggcattcgg tgcgttaacg cccgatttgc tgcaacaaag catcgccaac gactggcatt
     1801 acacccttgc cgacgctttg ggcatcaata tgtcgtctga agcgggtgtg tcgggcaaaa
     1861 tgctgttcgg cgcgatttac tttctgccga tttacgcgac cgtatttgtc gtgggcggtt
     1921 tttgggaagt cttgttcgcc accgtgcgca aacacgaaat caacgaaggt ttcttcgtga
     1981 cttcgattct gtttgcctta atcgttccgc ccacgctgcc gctgtggcag gctgccttgg
     2041 gtattacctt cggcgtggtg gttgcaaaag aagtattcgg cggtacgggt aaaaacttta
     2101 tgaaccctgc gctggcaggc cgcgccttcc tgttcttcgc ctacccagcc aacttgagcg
     2161 gcgatgcggt ttggacggcg gttgacggct attccggtgc aaccgcgctg gcgcaatggg
     2221 cggcacacgg tgcagacggc ctgaaaaacg ccgtaaccgg tcaaaccatc acttggatgg
     2281 acgcgtttat cggcaaactg cccggctcca tcggcgaagt ctccactttg gcgctcttaa
     2341 tcggcggcgc gtttatcgtg tttgcccgca tcgcttcttg gcgcattatt gccggcgtga
     2401 tgatcggtat gattgccatg tcttcgctgt tcaacttcat cggttcggac accaacgcta
     2461 tgtttgctat gccttggtac tggcatctgg tcgtcggcgg cttcgccatc ggtatgctgt
     2521 ttatggcgac cgaccctgtt tccgcctcct ttaccaatgt cggcaaatgg tggtacggcg
     2581 cgctgatcgg cgtgatgtgc gtattgatcc gtgtggtcaa ccccgcttac cccgaaggca
     2641 tgatgttggc gattctgttt gccaacctgt ttgccccgat tttcgactat ttcgtcgcac
     2701 aagcgaacat caaacgcaga aaggcgcgca gcaatggcta agaaattcga taaagacagc
     2761 ttcagcggca cgctgattgt cgtgttggcg gtcagcctga tttgctcggt catcgttgcc
     2821 ggtgcggtcg tcggcttgaa acccatccaa gaaaaacaaa aactccaaga caaacaaggc
     2881 tatattttga gcgtggccgg tttgatggat aaggacaccg acatcggcaa aacctttgcc
     2941 gagcgtatcg agcaacgcgt ggtcgatttg gcgaccggcg aatatgtgaa agacgcgcca
     3001 aaagacttca gcgcgcgcat cgcaggcaaa gaccccgcgc aaagcatccg aatcaaaccc
     3061 gaagacgatt tggcaggcat caaaagccgt gccaaataca ctgaggttta tttggtaaaa
     3121 ggcgaagacg gcaaaatcgg ccaaatcatc ctgccgatgc acggtaacgg tttgtggtca
     3181 gtcatgtacg gctttgtcgc cattcaaccg gacggcaaca ccatcaacgg cattacctac
     3241 tacgaacaag gcgaaacccc gggcttgggc ggcgaaatcg gcaatccgtt gtggcagcaa
     3301 aaattcgtcg gcaaaaaact gtttgacgga caaggcaaac tcgccctgca cgtcggcaaa
     3361 ggcgcgggtt cggacaaaga acacggcgta gatgccctct ccggcgcgtc gctgacttcc
     3421 aaaggcgtgc aaggttcgtt cgcctactgg tttggcgaaa acggctatat cccctacctg
     3481 aacaaattga aatcagtagg agcacaataa tggctgatat gaaacgcttg aaacacttga
     3541 tgttttcacc ctttatcgac aacaacccga ttgccttgca ggttttgggt atttgttcgg
     3601 ctttggcggt taccaccaaa cttcagacgg ccatcgtgat gggtatttcc gtagctttgg
     3661 taaccggttt ttccagcttc ttcatttcgc tggtacgcaa ctacatcccc aacagcatcc
     3721 gtattatcgt gcaaatggcg attatcgcgt cgctggttac gctggtcgac caactcttgc
     3781 aggcatttgc ctacgaattg tccaaacagc tttccgtatt cgtcggtctg attattacca
     3841 actgtatcgt gatgggccgc gccgaagcat ttgcgatgaa agagccgccg ctggaaagcc
     3901 tgatcgacgg catcggcaac ggcgcgggct acgggatgat gctgcttgtc gtcgccaccg
     3961 tccgcgaact gattggctcg ggcaaactct tgggctacac cgttttccaa accgtgcagg
     4021 acggcggctg gtatcagacc aacggcttgt tcctgctcgc ccccagcgcg ttcttcatca
     4081 tcggcttttt gatttgggga ctgcgtacct ggaaacccga acaggcggag gaataagcta
     4141 tggaacacta tttgagcctc tttatcaaat ccgtcttcat cgaaaatatg gcgctatcct
     4201 tctttttggg tatgtgtacg tttttggcgg tatccaaaaa agtatccacc gcattcggtt
     4261 tgggtgtggc ggtgattttc gtactcggac tgtccgtccc cgccaaccaa ttggtttact
     4321 cgctgctcaa agacggcgcg attgtcgaag gcgtggattt gacctttttg aaattcatca
     4381 ccttcatcgg cgtgattgcc gctttggtgc agattttgga aatgttcttg gataaattcg
     4441 tccccgccct ctataacgcg ttgggcatct acctgccgct gattaccgtg aactgcgcga
     4501 ttttcggcgc cgtatcgttt atggcgcaac gcgaatacaa cttcggcgag tccgttgtat
     4561 acggcttcgg cgcgggcttg ggctggatgt tggcgattgt cgctttggcg ggcattaccg
     4621 aaaaaatgaa atattcggac gctcccaaag gcctcaaagg cttgggcatt acctttatcg
     4681 ccgccggcct gatggcgatg gcgtttatgt cgttctccgg catccagtta taagaaaggg
     4741 accggtatgg agattatttt aggtatcgtg atgtttaccg tcatcgtttt ggttttggca
     4801 ctgatgattc tatttgccaa atccaaactg gtcagcgaag gcgacatcac catcaaagtc
     4861 aacggcgaaa aagagctgac gatgcccgcc ggcggcaaac tcttgggcgc gcttgccaac
     4921 gaaggcatct ttatcccctc cgcctgcggc gggggcggtt cgtgcggaca atgccgcgtc
     4981 gtcgtaaaaa gcggcggcgg cgacatcctg ccgaccgagc tgtcccacat cagcaaacgc
     5041 gaagcacgcg aaggctgccg tctgtcgtgc caagtcaacg tcaaaaccga catggacatc
     5101 gaagtccccg aagaagtgtt cggcgtgaaa aaatgggaat gcaccgtcat ctccaacgat
     5161 aacaaagcca cgttcattaa agaactcaag cttgccattc ccgaaggcga agaagtcccc
     5221 ttccgcgccg gcggctacat tcaaattgaa gctcctcctc acactgttgc ctacaaagac
     5281 ttcgacattc ctaaggaata tcacgaagac tgggacaaat acaatttgtg gcaatacgtt
     5341 tccaaagtgg acgagccgat tttgcgtgcc tactctatgg cttcgtatcc tgaagaaaaa
     5401 ggcatcatta tgctgaacgt gcgtatcgcc acgccgcccc cgcgcgtacc tgatgcgcct
     5461 ccgggacaaa tgtcgtccta catctggtcg ctcaaacccg gcgacaaagt tacgatttcc
     5521 ggcccgttcg gcgaattttt cgccaaagac accgatgccg aaatggtatt tatcggcggc
     5581 ggtgcgggta tggctccgat gcgttcccac attttcgacc agttgaaacg tttgaactcc
     5641 aaacgtaaga ttaccttctg gtacggcgca cgttccaaac gcgagatgtt ctatgtcgaa
     5701 gactttgacc aactcgcggc agagttcccg aacttcacgt ggcacgtcgc tctgtccgat
     5761 ccgctgccgg aagacaactg ggacggctac acaggcttca tccacaacgt ggtttacgaa
     5821 aaccacctga aaaaccacga agcgccggaa gactgcgaat tttatatgtg cggtcctccg
     5881 attatgaacc agtccgtcat caaaatgctc aaaaacttgg gcgtggaaga cgaaaacatc
     5941 ctcttggacg atttcggcgg ttaaaaccca acctcaaata caaaaggaag aaacctcggt
     6001 ttcttccttt ttctatccga taccgtccga acacccttca gacggcatcg gcatagaaac
     6061 atatcggccg ttttgcgata taattcaaac catttgccaa aaccgtcaaa cactatgccg
     6121 tctgaaacac gcctgccgaa ctttatccgc gtcttgatat ttgccctggg tttcatcttc
     6181 ctgaacgcct gttcggaaca aaccgcgcaa accgttaccc tgcaaggcga aacgatgggc
     6241 acgacctata ccgtcaaata cctttcaaat aatcgggaca aactcccctc acctgccgaa
     6301 atacaaaagc gcatcgatga cgcgcttaaa gaagtcaacc ggcagatgtc cacctatcag
     6361 cccgactccg aaatcagccg gttcaaccaa cacacagccg gcaagcccct ccgcatttca
     6421 agcgacttcg cacacgttac tgccgaagcc gtccgcctaa accgcctgac acacggcgcg
     6481 ctggacgtaa ccgtcggccc tttggtcaac ctttggggat tcggccccga caaatccgtt
     6541 acccgtgaac cgtcgccgga acaaatcaaa caagcagcat cttatacggg catagacaaa
     6601 atcattttaa aacaaggcaa agattacgct tccttgagca aaacccaccc caaagcctat
     6661 ttggatttat cttcgattgc caaaggcttc ggcgttgata aagttgcggg cgaactggaa
     6721 aaatacggca ttcaaaatta tctggtcgaa atcggcggcg agttgcacgg caaaggcaaa
     6781 aacgtgcgcg gcgaaccgtg gcgcatcggt atcgagcaac ccaacatcgt ccaaggcggc
     6841 aatacgcaga ttatcgtccc gctgaacaac cgttcgcttg ccacttccgg cgattaccgt
     6901 attttccacg tcgataaaag cggcaaacgc ctctcccata tcattaatcc gaacaacaaa
     6961 cgacccatca gccacaacct cgcctccatc agcgtggtcg cagacagtgc gatgacggcg
     7021 gacggcttgt ccacaggatt attcgtattg ggcgaaaccg aagccttaaa gctggcagag
     7081 cgcgaaaaac tcgctgtttt cctgattgtc agagataaag gcggctaccg caccgccatg
     7141 tcttccgaat ttgaaaaact gctccgctaa acatacaaac cgattaggaa acaccatgaa
     7201 aaccctgctc cttaccttcg gcatcttcct gaccgtcatc atcggtatgg cggtcggcta
     7261 tattttctcc aaacgcagca tcaaaggcag ttgcggcggc attactgcct tgggtatgaa
     7321 aaaaatgtgc gactgcgaca caccttgcga caccctgcaa aagaaactgg atgaagaaaa
     7381 acaggcaggc ggcatacggg ttgaccgtta acgccgaaat atagtggatt aacaaaaacc
     7441 agtacagcgt tgcctcgcct tagctcaaag agaacgattc tctaaggt
//
LOCUS       DAWITQ010000096         7350 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.096, whole genome shotgun sequence.
ACCESSION   DAWITQ010000096 DAWITQ010000000
VERSION     DAWITQ010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7350)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7350)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7350
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.096"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(108..2711)
                     /gene="pepN"
                     /locus_tag="WIX18_001486"
     CDS             complement(108..2711)
                     /gene="pepN"
                     /locus_tag="WIX18_001486"
                     /EC_number="3.4.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HEZ5238580.1"
                     /translation="MSKTVRYLKDYQTPAYRILETDLHFDIAEPQTVVKSRLTVEPQR
                     VGEPLVLDGSAKLLFVKINGAAADYVLEGEMLTIAGVPSERFTVEVETEILPAENKSL
                     MGLYASGGNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDG
                     GECSDGRHWVKWEDPFAKPSYLFALVAGDLAVTEDRFTTMSGRNVKIEFYTTEADKPK
                     VGFAVESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADS
                     RTATDTDFEGIESVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSGDRASRA
                     VRRIENIRLLRQHQFPEDAGPTAHPVRPASYEEMNNFYTMTVYEKGAEVVRMYHTLLG
                     EEGFQKGMKLYFQRHDGQAVTCDDFRATMADANGINLDQFALWYSQAGTPVLEAEGRL
                     KNNVFELTIKQTVPPTPDMADKQPMMIPVKIGLLNRNGEAVAFDYQGKRATEAVLLLA
                     EAEQTFPLEGVTEAVVPSLLRGFSAPVHLNYPYSDDDLLLLLAHDSDAFTRWEAAQTL
                     YRRAVAANLAALSDGVELPKHEKLLAAVEKVISDDLLDNAFKALLLGVPSEAELWDGA
                     ENIDPLRYHQAREALLDTLAVRFLPKWHELNRQAAKQENQSYEYSPEAAGWRTLRNVC
                     RAFVLCADPAHIETVAEKYGEMAQNMTHEWGILSAVNGNESDTRNRLLAQFADKFSDD
                     ALVMDKYFALVGSSRRSDTLQQVQTALQHPKFSLENPNKARSLIGSFSRNVPHFHAED
                     GSGYRFIADKVIEIDRFNPQVAARLVQAFNLCNKLEPHRKNLVKQALQRIRAQEGLSK
                     DVGEIVGKILD"
     gene            complement(2923..3717)
                     /locus_tag="WIX18_001487"
     CDS             complement(2923..3717)
                     /locus_tag="WIX18_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEZ5238581.1"
                     /translation="MNTILAFDIETVPDVQGIRTLYELPSSLPDDEVVLFAQQKRRAQ
                     TGGDFMQHHLHQIVAISCCMRWGQDKVHVGTIGEMDDGEEVVIAKFFELIEKHTPQLV
                     SWNGGGFDLPVLHYRSLIYGINAARYWDMGDGDFGDSRDFKWNNYISRYHQRHCDLMD
                     LLALYQPRANVPLDDMAKLCGFPGKLGMDGSKVWDAFHAGRLKEIRNYCETDAVNTYL
                     MYLRFCLVSGRFDADEYEMEIKRIRNYLSAQTEDKPHWSEFAQAWK"
     gene            complement(4468..5337)
                     /locus_tag="WIX18_001488"
     CDS             complement(4468..5337)
                     /locus_tag="WIX18_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase"
                     /protein_id="HEZ5238582.1"
                     /translation="MKFIFFVLYVLQFLPFALLHKLADLTGLLAYLLVKPRRRIGEIN
                     LAKCFPEWSEEKRKTVLKQHFKHMAKLMLEYGLYWYAPAGRLKSLVRYRNKHYLDDAL
                     AAGEKVIILYPHFTAFEMAVYALNQDVPLISMYSHQKNKILDAQILKGRNRYDNVFLI
                     GRTEGLRALVKQFRKSSAPFLYLPDQDFGRNDSVFVDFFGIRTATITGLSRIAALANA
                     KVIPAIPVREADNTVTLQFYPAWKSFPGEDAQADAQRMNRFIEERVREHPEQYFWLHK
                     RFKTRPEGSPDFY"
     gene            complement(5388..5924)
                     /gene="ruvC"
                     /locus_tag="WIX18_001489"
     CDS             complement(5388..5924)
                     /gene="ruvC"
                     /locus_tag="WIX18_001489"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HEZ5238583.1"
                     /translation="MSATVRILGIDPGSRVTGFGIIDVRGRDHFYVASGCIKTPADAS
                     LADRIAVIVRHIGEVVAVYKPQQAAVEQVFVNVNPASTLMLGQARGAALAALVSHKLP
                     VSEYTALQVKQAVVGKGKAAKEQVQHMVVQMLGLSGTPQADAADGLAVALTHALRNHG
                     LAAKLNPSGMQVKRGRFQ"
     gene            complement(5927..6166)
                     /locus_tag="WIX18_001490"
     CDS             complement(5927..6166)
                     /locus_tag="WIX18_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fis family transcriptional regulator"
                     /protein_id="HEZ5238584.1"
                     /translation="MPHTLPDISQCIRQNLEQYFKDLNGTEPCGVYDMVLHQVEKPLL
                     VCVMEQCGGNQSKASVMLGLNRNTLRKKLIQHGLL"
     gene            complement(6197..7207)
                     /gene="dusB"
                     /locus_tag="WIX18_001491"
     CDS             complement(6197..7207)
                     /gene="dusB"
                     /locus_tag="WIX18_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HEZ5238585.1"
                     /translation="MHIGGYFIDNPIALAPMAGITDKPFRRLCRDFGAGWAVCEMLTS
                     DPTLRNTKKTLHRSDFADEGGIVAVQIAGSDPQQMADAARYNVSLGAQVIDINMGCPA
                     KKVCNAQAGSALMQNEPLVAAILEAVVRAVDVPVTLKTRLGWHDDHKNLPAVARIAED
                     CGIAALAVHGRTRTQMYKGEAAYDLIAETKCRLNIPVWVNGDITSPQKAQAVLKQTAA
                     DGIMIGRGAQGRPWFFRDLKHYAEHGVLPPALSLAECSAAILNHVRAMHAFYGETAGV
                     RIARKHIGWYIDEMPDGEQTRREINRLDSAAAQYDMLAGYLERLAGKTDRWACAYRQN
                     AV"
BASE COUNT         1648 a         1943 c         1943 g         1816 t
ORIGIN      
        1 atatgacttt gcggccgttt tgccattgcg taataaaacg atggggaagt gatgataaaa
       61 cgtgtgtgta actatatcag acggcattgt ttttctgttt gacggcctca atccaaaatt
      121 ttgccgacga tttcgcccac gtctttcgac aatccttcct gcgcccgaat gcgctgcaat
      181 gcttgtttca ccaagttttt gcggtgcggc tcgagcttgt tgcagaggtt gaacgcctgc
      241 accaggcggg cggcgacctg cgggttaaag cggtcgattt cgatgacttt gtcggcgatg
      301 aagcggtagc cgctgccgtc ttctgcgtgg aaatgcggga cgttgcggct gaagctgccg
      361 atgagcgagc gggctttgtt gggattttcg aggctgaact tcggatgctg caaggcggtt
      421 tgaacctgtt gcagggtgtc gctgcggcgg cttgagccga cgagggcgaa atatttgtcc
      481 atcaccagcg cgtcgtctga aaacttgtcg gcaaactgag ccagcaggcg gttgcgcgta
      541 tcgctttcgt tgccgttaac ggcggacagg atgccccatt cgtgggtcat gttttgcgcc
      601 atttcgccgt atttttcggc aacggtttcg atgtgcgcgg ggtcggcgca caggacgaag
      661 gcgcggcaga cgttgcgcag cgtgcgccag ccggcagctt cggggctgta ctcgtagctt
      721 tggttttcct gcttcgccgc ctgacggttc aattcgtgcc atttcggcag gaagcggacg
      781 gcaagcgtat ccaacaaggc ttcgcgcgcc tgatggtagc gcagcgggtc gatgttttct
      841 gcgccgtccc acagttcggc ttcagacgga acgcccaaaa gcagggcttt gaaggcgttg
      901 tccaagaggt cgtctgaaat gactttttcg acggcggcaa gcagtttttc atgtttcggc
      961 aactcgacgc cgtctgaaag cgcggcaagg ttggcggcga cggcgcggcg gtagagcgtt
     1021 tgcgcggctt cccagcgcgt gaaggcgtcg ctgtcgtggg caagcaggag cagcaggtca
     1081 tcgtcgctgt acggatagtt cagatgcact ggcgcactga acccgcgcag cagcgaggga
     1141 acgacggctt cggttacgcc ttcgagcggg aaggtctgtt cggcttcggc cagcagcaac
     1201 acggcttcgg tcgcgcgttt gccctgataa tcaaatgcca ccgcttcgcc gttgcggttc
     1261 agcagcccga ttttgacggg aatcatcatc ggctgcttgt ccgccatatc gggcgtgggc
     1321 ggcacggttt gtttaatggt caactcgaaa acattgtttt tcagacgacc ttccgcttcc
     1381 aaaacgggcg tgcccgcctg gctgtaccac aaggcgaact ggtcgagatt aatgccgttc
     1441 gcgtccgcca ttgtcgcgcg gaaatcgtcg caggtcacgg cttgcccgtc gtggcgttgg
     1501 aaatagagct tcatgccttt ttggaagccc tcttcgccga gcagggtgtg atacatccgc
     1561 accacttccg cgcctttttc ataaacggtc atggtgtaga aattgttcat ctcctcatag
     1621 ctggcggggc gcaccggatg ggcggtcggg cctgcgtctt cggggaactg gtgctggcgc
     1681 agcaggcgga tgttctcgat gcggcgcacg gcgcggctgg cgcggtcgcc ggaaaattct
     1741 tggtcgcgga acacggtcag cccttccttc agtgaaagct ggaaccagtc gcggcaggta
     1801 acgcggttgc ccgtccagtt gtggaaatat tcgtgtccga tcacggattc gatgccttca
     1861 aaatcggtat cggtggcggt tcggctgtcg gcaaggacga acttggtgtt aaagatgttc
     1921 aaacccttgt tttccatcgc acccatattg aaatcgccta cggcgacgac catgaaaata
     1981 tccaagtcgt attccaagcc gaagcgcgtt tcgtcccact tcatcgcgtt tttcaaggat
     2041 tccacggcaa agccgacctt gggcttgtcc gcttcggtgg tgtaaaactc gattttgacg
     2101 tttctgccgc tcatggtggt gaaacggtct tccgttaccg ccaaatcgcc cgcgaccaaa
     2161 gcaaacaaat agctcggttt ggcaaacggg tcttcccatt tcacccaatg gcggccgtct
     2221 gaacactcgc cgccgtcgat tttgttgccg ttggagagca aaacgggata gcgttttttg
     2281 tccgcaacga tggtggtcgt gaatttggac atcacatccg gacggtcgat gtagaacgtg
     2341 attttgcgga agccctccgg ctcgcattgg gtaaacagat tgccaccgga agcatacagc
     2401 cccatcagcg atttgttttc cgccggcagg atctcggttt ccacttcgac ggtgaagcgt
     2461 tcggacggca cgcctgcaat cgtcagcatc tcgccttcca acacataatc cgctgccgcc
     2521 ccattgattt tgacgaacaa gagtttcgcc gaaccgtcca acaccagcgg ctctcctacc
     2581 ctctgcggct cgaccgtcaa acgtgatttc acgacggttt gcggttcggc aatgtcaaaa
     2641 tgcaggtcgg tttcaaggat gcggtaggca ggcgtttggt aatctttcag ataacggacg
     2701 gttttgctca tttttttctt tcaatattgt ttggtttgac tggaaaaggc ttcagacagc
     2761 acggatacag cttttaaagc ggattaacaa aaatcaggac aaggcgacga agccacagac
     2821 agtacagata gtacgggctg taccggtttg aatttaatcc accatatgcc gtctgaaacc
     2881 gaaacggcgg cacaagcgta ccgccttcgg acagcaggtt ttctatttcc acgcttgggc
     2941 aaattctgac caatgcggtt tatcttctgt ttgggcggaa agatagtttc tgatccgctt
     3001 gatttccatt tcgtattcgt ccgcgtcgaa tctgccgctg accagacaaa aacgcagata
     3061 catcaaatac gtattcacgg catcggtttc gcaataattg cggatttctt tcagcctgcc
     3121 cgcgtggaac gcatcccaca ccttgctgcc gtccataccc agcttgcccg gaaaaccgca
     3181 cagtttcgcc atatcgtcca gcggcacgtt tgccctcggc tggtaaagcg cgagcaaatc
     3241 catcaaatcg cagtggcgtt ggtgataacg gctgatgtag ttgttccact tgaaatcgcg
     3301 gctgtcgccg aaatcgccgt cgcccatatc ccaatagcgc gcggcgttaa tgccgtatat
     3361 cagggagcgg taatgcagaa ccggcaggtc gaaaccgccg ccgttccaac tgaccagttg
     3421 cggcgtatgt ttttcaatca actcgaaaaa tttggcaatc acgacttctt cgccatcgtc
     3481 catctcgccg atggtgccga catggacttt atcctgcccc caacgcatgc agcacgaaat
     3541 cgccacaatc tgatgaagat gatgctgcat aaaatcccca cccgtctgag cacggcgttt
     3601 ttgctgggca aacagcacca cttcatcgtc gggcagcgag gacggcagct cgtacaatgt
     3661 tcggataccc tgcacatcgg gtacggtttc aatatcgaaa gccaaaatcg tattcatggc
     3721 agtaccttgc attcaaaaac agacttgcgc ctattgtgtc attaaaaggc ggataaaaaa
     3781 agaggcaacc ccccacagga ttgccccaat acctcaaatc agagatttac gcttcacaaa
     3841 caatacaggc tttcgcctgc ggctttgccc gcgtagctca actctacgcc ggcaaacttt
     3901 tgtttcaccg tttccgatga aaccccgacc aatcgcaaga ttgaccggaa aatcctttca
     3961 gacggcattt cctgcctgtc gtgtaattcc atgtagcgaa atgtacgcca ttttctacgc
     4021 tttgccaagc attttttaca atataaatgt caaaacatta attttataaa attgctgaaa
     4081 atattaaata tatgaatttt tattttaaat attttaataa atataaattt aattttgatt
     4141 tatatttaaa tttaagcata aaatgttaaa tattaaaggc aatatgaaag gcatatatta
     4201 aatatttatt tataacgcta tgtttttaaa gaaaattaat tttaatatat taactagatt
     4261 gtctgcagat attcatgggt ttgcggtatt tcttccaaaa cctgcttcga attttccgac
     4321 caagtcttaa aaatattgtt ttttgagata cttaaatagc agcgattatc aaatgaaatc
     4381 tgttcatata atctgccatt tcgcatttaa aaaaacaaac aggagtttcg actcgaaacg
     4441 cctgatatgt tttgtaattt tacgtagtca gtaaaaatcg gggctgcctt ccggacgggt
     4501 tttaaaacgc ttgtgcagcc aaaaatattg ttctggatgt tcgcgcaccc gctcttcgat
     4561 aaagcggttc atacgctgcg catcggcttg cgcgtcttca cccggaaagg atttccaagc
     4621 cgggtagaat tgcaatgtaa ccgtattgtc cgcctcgcgg acagggatgg cgggtatcac
     4681 ttttgcattt gcaagcgcgg caatgcggct caatccggta atcgttgccg tccgaatacc
     4741 gaagaaatcc acaaaaaccg aatcgttgcg tccgaaatcc tgatcgggca gatacagaaa
     4801 cggcgcgctg cttttgcgga actgtttgac gagggcgcgc agcccttcgg tgcgcccgat
     4861 aaggaagacg ttgtcgtagc ggttgcggcc tttcaaaatc tgtgcgtcca atatcttgtt
     4921 tttttggtgg gaatacatac taattagcgg gacatcctga ttaagcgcgt acaccgccat
     4981 ctcgaacgcg gtaaagtgcg gatacaggat gatgactttt tcccccgccg ccagcgcgtc
     5041 gtccaaataa tgcttattgc ggtagcgcac cagcgatttc aaacgcccgg cgggcgcgta
     5101 ccaatataag ccgtattcga gcatcagttt cgccatatgt ttgaaatgct gtttcaacac
     5161 ggttttacgc ttttcctcac tccattcggg aaaacatttc gccaaattga tttcgccgat
     5221 acggcggcgg ggtttgacca aaaggtaggc aagcaaaccc gtcagatcgg caagtttgtg
     5281 cagcagcgca aacggcagaa actgcaaaac atacagtaca aaaaatataa atttcatctc
     5341 gatacacatt ttcttttcag acggcaaaat acaaatgccg tctgaaacta ttgaaacctg
     5401 ccgcgcttga cctgcatccc cgaaggattg agtttggcgg caagcccgtg gttgcgtaag
     5461 gcgtgggtca gcgcgacggc aagaccgtcc gccgcatccg cctgcggcgt tcccgaaagc
     5521 cccagcatct gcaccaccat atgctgcacc tgttctttcg ccgccttgcc tttgccgact
     5581 accgcctgtt tgacctgcaa ggccgtgtat tccgaaacgg gcagcttatg gctgaccaat
     5641 gccgccaatg ccgcgcccct agcctgaccc agcatcagcg tcgatgcagg attgacgttg
     5701 acgaacacct gttccactgc cgcctgttga ggcttgtaaa cggcaacgac ttcgccgata
     5761 tgccgcacaa tcacggcaat cctgtctgcc agagacgcat cggcaggcgt tttgatgcag
     5821 ccggaggcaa cataaaaatg atcccgcccc ctgacatcga tgatgccgaa acccgttacg
     5881 cggctgcccg ggtcaatgcc caagatacgg acggttgccg acatattcac aacaaaccgt
     5941 gttgaatcag ttttttacgc aaggtattgc ggttcagccc cagcatcacg gaggctttgg
     6001 actggttgcc gccgcattgc tccatcacgc acaccagcag cggtttttcc acctgatgca
     6061 agaccatatc gtacacgccg caaggttcgg taccgttcag gtctttgaaa tattgttcca
     6121 aattttgtct gatacattgg gaaatatcgg gaagggtatg gggcataatc gcgctttcaa
     6181 aaggataatc gggtgttcag acggcatttt ggcggtaggc gcacgcccaa cggtcggttt
     6241 ttccggcaag tctttcaaga taacctgcaa gcatgtcgta ttgcgccgcc gcactgtcca
     6301 agcggttgat ttcacgacgt gtctgttcgc cgtcgggcat ttcgtcgatg taccagccta
     6361 tgtgtttgcg tgcaatgcgc acaccggcgg tctcaccata aaacgcgtgc atggcgcgga
     6421 cgtggttcaa aatggcggca ctgcattctg ccaaactcaa ggcaggcggt aaaacaccgt
     6481 gttcggcgta atgtttcaaa tcgcggaaga accacggtct gccttgcgcg ccgcgcccta
     6541 tcatgatgcc gtctgcggcg gtttgtttaa ggacggcttg ggctttttgc ggcgaagtaa
     6601 tgtcgccgtt gacccaaacc gggatgttca gacggcattt ggtttcggca atcaggtcgt
     6661 aagccgcttc acctttgtac atttgcgtgc gcgtgcgtcc gtggacggca agggcggcaa
     6721 tgccgcaatc ttcggcgatg cgggcgacgg caggcaggtt tttgtggtcg tcgtgccagc
     6781 ccaaacgggt tttgagggta acgggtacgt ccaccgcacg gacgacggct tcgagaatgg
     6841 cggcaaccag cggctcgttc tgcatcagcg cgctgccggc ttgggcattg cacactttct
     6901 tggcgggaca gcccatgttg atgtcgataa cctgcgcccc aaggctgacg ttgtaacgcg
     6961 cggcatccgc catctgctgc ggatcgctgc cggcaatctg cacggcaacg atgccgcctt
     7021 catcggcaaa atcgctgcgg tgcagggtct ttttggtatt tctaagtgtc gggtcgctgg
     7081 tcagcatttc gcacaccgcc caacccgcgc cgaaatcgcg gcagaggcgg cggaagggtt
     7141 tgtcggtaat gcccgccatc ggtgcaagtg cgatggggtt gtcgataaaa tagccgccga
     7201 tgtgcataat ggatccgcgt ttcaaaaaag tgcgccattg tacatttttt aagcaggatt
     7261 tccaatctcc ggacgcgccc gcgattgggg cggacaccgt tttatggcat aatccgcaca
     7321 cagattccct gccccgccac tcacaggcgg
//
LOCUS       DAWITQ010000097         7332 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.097, whole genome shotgun sequence.
ACCESSION   DAWITQ010000097 DAWITQ010000000
VERSION     DAWITQ010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7332)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7332)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7332
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.097"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..161
                     /locus_tag="WIX18_001492"
     CDS             <1..161
                     /locus_tag="WIX18_001492"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238586.1"
                     /translation="PIAKAMMLNQGFCEAFIVVVLMGIAAIMRKRPSFSKPPHRFRVC
                     PSSRPDLQ"
     gene            198..410
                     /locus_tag="WIX18_001493"
     CDS             198..410
                     /locus_tag="WIX18_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HEZ5238587.1"
                     /translation="METLILDIGGMSCGGCVKSVTRILEGVKGVASVEVSLENKSATV
                     GYDPAQTDAGALIEAVEDGGYDAALK"
     gene            558..2141
                     /locus_tag="WIX18_001494"
     CDS             558..2141
                     /locus_tag="WIX18_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase regulatory domain-containing
                     protein"
                     /protein_id="HEZ5238588.1"
                     /translation="MPNKKKKAAFARAATENGVPDVSNIKNSYDDLMYESKAFSQTAI
                     NALEARARMMGLQPAPAANAKVLELGCSMGGNIITQALYYPDAEFVGIDLSGRQVAQG
                     NAIIEKMGLKNVRLEEKDILTVDESFGKFDYIIVHGIWSWVPDAVKDKIFSICRNNLT
                     EHGIAYISYNVYPGWKRQEQLREIMYFAGRDVLEEPLEARTRKGLDALKALAEILEND
                     KGLDGGGKLPAIQKILNHNFYYIAHEYMEAFNDPIYVNGFIEWANRHRLAYIGDADLH
                     ASFVSWMAEHTRERILALAGGDYIAKEFYSDILSDRQFRRSLLCREEVGDTVRRDESV
                     AVEVIESLNFRPARGETINFDENDTLLSGIRDVMKTGEPFKTEDVAENLARRFPGLTF
                     DRMKINSQLLLQTILGRFSVSSDNAGKQFFEDHKTYVPARFTDYAAAFVEHGAEAFVR
                     PANRYNESTPSFGYGHLYIMRQLSRPTSKQALIETVAENLNIVSTTPDGLTFHPPAEV
                     YVEEILADLADRHFLVSAD"
     gene            2223..3320
                     /locus_tag="WIX18_001495"
     CDS             2223..3320
                     /locus_tag="WIX18_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HEZ5238589.1"
                     /translation="MNQTFTLPDTRPYPQNPIKNHLLLNAYQLAHNSSQASRKLSSGQ
                     LQTEIRGMLEQNHYINLSLALTMSPDAGTYAALLSSVNAVLDCEKEGEVQWFALPVVL
                     VSGCKKERAIEMKLPTEALFACLQNYPHLRALTQETQWLPYLVHSSDLSAVAPDEWWR
                     AKQNTEAAAQHLRRFAPRPLLLPEGQSVHVVYALGFGSGKVQTALGQNLLQAGLPLMQ
                     VWQENLASEGVTLFANPLSPDSPVRALSDGSHTRQRMAMDVFAANAIRAVRMQSPRVG
                     VVAAAKAGGQVLFGFNATDGAFEVVPQVFSWQLSFTDNIAVIQQNFLDLMAECRVEHV
                     YLLHNPLGEQESIPSYAEALKREGHNPFFSA"
     gene            3434..4549
                     /locus_tag="WIX18_001496"
     CDS             3434..4549
                     /locus_tag="WIX18_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HEZ5238590.1"
                     /translation="MKIVIAPDSFKESLTAQQVAEAIKRGFQQSIADVECLLCPVGDG
                     GEGTVDAIRHSLDLEEKCLQVTGPFGQKEVMRYFQKEQLALFEVADLVGLGKIPLEKR
                     NPLQIQTRGIGELIRHLISQEIKEIYIGVGGTASNDGGIGIAAGLGYQFYDEDGNTLP
                     VCGQSLLNLASVSTENRYEIPEDVHIRILADVVSPLCGHQGATYTFGKQKGLDSTMFE
                     AVDQAIQDFYEKVSPATLKLKGAGAGGGIAGGLCAFAQASIVSGIDTCLDLIDFDKKV
                     SDVDLVIIGEGRLDRQSLAGKAPIGVAKRTPVGVPVVAICGSLVEDLPSLPFENIQAA
                     FSILEKSEPLEDSLKNASLYLEHTASNIGHLLNMPKI"
     gene            4674..5129
                     /locus_tag="WIX18_001497"
     CDS             4674..5129
                     /locus_tag="WIX18_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HEZ5238591.1"
                     /translation="MKKPKILFVCLGNICRSPMAEYILRRRAAEAGIPLEADSAGTSG
                     WHDGEDMHRETAKILKKHGIDASGFTSRKICQSDAAAFDCIIAMDGKNLSELERTFGR
                     RPEKIFKLTDLIPESGYDHVPDPWYTGDFEETFRLADAGCRALLEKISK"
     gene            5200..5676
                     /locus_tag="WIX18_001498"
     CDS             5200..5676
                     /locus_tag="WIX18_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HEZ5238592.1"
                     /translation="MKTNFKQKIIEQARSEGLQVTALREQVLDIVLQQSGVIKAYNVL
                     SQMQQQSEGVLAPPTAYRALDFWAEQGVLHKVAAVNGYILCSHAQHECDDHCHDHEEA
                     EAHHSAFILVCTECGTADEQTLSHEWAALRAGVAESGFALKEEHVVLTGICKKCQK"
     gene            5664..6590
                     /locus_tag="WIX18_001499"
     CDS             5664..6590
                     /locus_tag="WIX18_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEZ5238593.1"
                     /translation="MSEVKKTKVHLISGFLGTGKTTALKSLMAQKDPNEKWVIIVNEF
                     GEIGIDGAVLSDNGIPVAEIAGGCLCCTAGPQMGVTVQKMLRDAKPDRLMIEASGLAH
                     AASVIDELKAKPLDSLLEIGAVFTVVNPRQFINPDYAQQALYKDQIGICDVLVASKTD
                     LCTTEQLAEFHDKAAKLFPPKAKVVEVQNAQLDIRWLDIPVIEKSRYRLKALPDNTMG
                     FQSQGFTFPAGRDFDGEKLTNFFNDLPKMTEGLVRAKGVFQVLGTWVWLNWVDGQWGA
                     NQVSWRRDSRFELIAKSFDADLIEQKLKDALE"
     gene            6655..7212
                     /locus_tag="WIX18_001500"
     CDS             6655..7212
                     /locus_tag="WIX18_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ5238594.1"
                     /translation="MKPKFKTVLTALLLAVSLPSMAATHVLMETDMGNIRLVLDESKA
                     PKTVANFVRYARKGFYDDTVFHRVIDGFVIQGGGFTEDLVQKATDKAVANESGNGLKN
                     TAGTIAMARTADPDSATSQFFINLADNASLDYKNGQYGYTVFGRVESGMDTVSKIARV
                     KTATRGFYQNVPVQPVKIRRVVVGQ"
BASE COUNT         1919 a         1808 c         1911 g         1694 t
ORIGIN      
        1 cgccgattgc caaggcgatg atgctcaacc agggtttttg cgaagcgttc attgttgtcg
       61 tcctgatggg aattgccgcc attatgcgca agcgtccgtc tttttccaaa ccgccgcacc
      121 gtttccgcgt ttgcccaagt tcacgccccg acttacaata acgcccgtca gattgcagtt
      181 ccaacgaaag gaaaatgatg gaaaccctta tcctcgacat cggcggcatg agctgcggcg
      241 gctgcgtcaa aagcgttacc cggatattgg aaggcgtaaa aggcgtggca agcgtcgaag
      301 tcagtcttga aaacaaaagt gcgaccgtcg gatacgaccc cgcgcaaacc gatgcagggg
      361 cgttgattga agccgttgaa gacggcggct atgatgccgc gttgaaataa agcggcaaaa
      421 atgccgtctg aagccttcgc gcctcccaga tgccgtctga agtacgctcc gcgccttcag
      481 atggcatttg atttagttga acgggtagga tgaattggtt aaacttgcgg gcaatagtgc
      541 cttcagacaa acaaaatatg ccgaacaaaa agaaaaaagc cgcctttgcg cgtgctgcaa
      601 cggagaacgg tgtgccggac gtgtccaaca tcaaaaattc atatgatgat ttgatgtatg
      661 aatccaaagc attttcccaa accgccatca acgccttgga ggctcgcgcc cgcatgatgg
      721 gtttgcagcc cgcgcccgcc gccaatgcca aggtcttgga gctgggctgt tcgatgggcg
      781 gcaacatcat cacgcaggct ctttattacc cggatgcgga atttgtcggt atcgacttgt
      841 ccggcaggca ggttgcgcag ggcaacgcca tcattgaaaa aatgggcttg aaaaatgtgc
      901 gtctggaaga aaaagatatt ttgaccgtcg atgagtcatt cgggaagttt gactatatca
      961 tcgtccacgg catttggtcg tgggtgcctg acgcagttaa agacaaaatt ttttcgattt
     1021 gccggaacaa cttgaccgaa cacggcattg cctatatttc atacaatgtt taccccggct
     1081 ggaaacggca ggagcagttg cgcgaaatta tgtactttgc cggcagggat gtgcttgaag
     1141 aacccttgga agcacggacg cggaaaggct tggacgcgct caaggcgctg gcggaaattt
     1201 tagaaaacga caagggcttg gacggcggcg gcaaacttcc ggcgattcaa aaaatattga
     1261 atcataattt ttattacatc gcacacgaat atatggaggc gtttaacgac ccgatttacg
     1321 tcaacggctt catcgaatgg gcaaaccgcc accggctggc gtatatcggg gatgccgatt
     1381 tgcacgcgtc ttttgtttct tggatggcgg agcatacgcg ggagcggatt ctggcattgg
     1441 cagggggcga ttatattgcc aaagaatttt acagcgatat tttatccgac cgccaattcc
     1501 gccgttcgct tttatgccgt gaggaagtcg gggatactgt caggcgtgac gagtcggttg
     1561 ccgtcgaagt gatagaaagt ttgaatttcc gcccggcaag aggggaaaca atcaactttg
     1621 atgaaaacga taccctgctt tcgggcatac gcgatgtgat gaaaaccgga gagccgttta
     1681 aaacggaaga tgttgcggaa aatctcgccc gccgatttcc cggtttgaca ttcgaccgta
     1741 tgaaaatcaa ttcccagctt ttattgcaaa ccattctcgg gcgtttttct gtttcatcag
     1801 acaatgcggg caaacaattt tttgaagacc ataaaaccta tgtgccggcg cgttttacag
     1861 attatgccgc cgcctttgtg gaacacggcg cggaagcgtt tgtccggcct gccaaccgtt
     1921 acaacgaaag caccccctca ttcggatatg ggcatttgta cattatgcgg caattgtcgc
     1981 ggccgacgag caaacaggca ttgattgaaa cggttgccga aaacttgaac atcgtcagca
     2041 ccacgcccga cggtttgaca ttccatccgc ctgccgaagt gtatgtggaa gaaatattgg
     2101 cagacttggc agacaggcat tttctcgttt cggcggattg acgggcaagt cccgacggca
     2161 atccgtccga tatattttca aacaggaaaa acacacacta cgaaaagcgg tacacgacac
     2221 atatgaacca gacatttacc ttgcccgata cgcgcccgta tccccaaaat ccgattaaga
     2281 accacctgct gctcaatgcc taccagttgg cgcataattc ttcccaggct tcgcgcaaac
     2341 tctcgtccgg ccaacttcaa accgaaatca gggggatgct tgagcaaaac cactatatca
     2401 acctttccct cgcgttgacg atgtcgcccg atgccggaac ttatgccgcg ctgctttcca
     2461 gtgtgaacgc ggtactcgat tgcgagaaag aaggcgaagt gcagtggttc gccctgccgg
     2521 tcgtgctggt gtccggctgc aagaaagaac gggcaatcga gatgaagctg ccgacggagg
     2581 cattgtttgc ctgcctgcaa aactatccgc acctgcgcgc gttgacgcaa gagacacaat
     2641 ggctgcctta tcttgtgcat tcgtccgatt tgagtgcggt cgcgccggat gagtggtggc
     2701 gtgccaaaca aaataccgaa gcggcggcgc aacacttacg ccgtttcgcc ccgcgccctt
     2761 tgctgttgcc cgaagggcag tccgtccacg tcgtttacgc gctgggtttc ggcagcggca
     2821 aggttcagac ggcattgggt cagaaccttc ttcaggcagg cctgccctta atgcaggtat
     2881 ggcaggaaaa tcttgcatcg gaaggtgtta cgctgtttgc caatccactt tccccggatt
     2941 ctccggtacg cgcgctttca gacggcagcc acacgcgcca gcgtatggcg atggatgttt
     3001 ttgcggcaaa cgcgatacgc gccgtccgta tgcagagtcc gcgcgtcggc gtggtcgctg
     3061 cggcaaaggc gggcggacag gttttattcg ggtttaatgc gaccgacggc gcgtttgaag
     3121 tcgtgccgca ggtgttttcg tggcagcttt cctttaccga caacatcgcc gtcatccagc
     3181 aaaatttcct cgacctgatg gcggagtgcc gcgtggaaca cgtttacctg ttgcacaatc
     3241 ccttgggcga acaggaaagc atcccgagct atgcggaagc attgaaacgg gaagggcaca
     3301 atccgttttt cagcgcatag tgatttgtag tagtgatagg ctttctcatt tatataataa
     3361 atcaaaataa agagcacaac actttttcat tctgtgttgt gccttgagtg aaacgaaagg
     3421 atgaattata aatatgaaga ttgtaattgc accggattcg tttaaggaaa gcttgacagc
     3481 tcaacaggta gctgaagcaa taaaaagagg cttccaacaa tcgatagcag atgtggaatg
     3541 tctcctctgt cctgtcggtg atgggggaga aggcactgta gatgctatcc gacattctct
     3601 tgacctagaa gaaaaatgtc ttcaagtgac aggacctttt ggacaaaaag aagtcatgcg
     3661 ctattttcaa aaagaacaac tagccctatt cgaagttgct gatttggttg gtcttggaaa
     3721 aatcccgcta gagaaacgaa atccattaca aatccaaact cgtggtattg gagaattgat
     3781 tcgccacctc attagtcaag aaattaaaga aatctatatt ggcgttggcg gtacggccag
     3841 taatgatgga ggtattggga ttgctgctgg tttaggttat caattttatg atgaggatgg
     3901 aaatacctta cccgtttgcg gtcaatcctt actaaaccta gcttctgttt caacagaaaa
     3961 tcgctatgaa attcctgaag atgttcacat tcgtatttta gcagatgttg tgagtccctt
     4021 atgtggacac caaggtgcga cctatacgtt tggcaagcaa aaagggttgg attctactat
     4081 gtttgaggcc gtagatcagg caatacaaga tttttatgaa aaagtctccc ctgcaacatt
     4141 aaaacttaaa ggagcaggag ctggtggagg catcgctggt ggtttgtgcg cctttgctca
     4201 ggcaagtatc gtatctggaa ttgacacctg cctggacttg attgactttg ataagaaagt
     4261 gtcagatgtt gacttggtta tcattggtga aggaagacta gatcgtcaaa gtttagcagg
     4321 gaaagcgcct attggtgtag caaaaagaac ccctgtcgga gttcctgttg tcgctatttg
     4381 tggcagtctc gttgaagatt tgccttccct gccatttgaa aatatccaag ctgccttttc
     4441 tattttggag aaaagtgaac ctttagaaga tagtttgaaa aatgccagtc tctatttgga
     4501 gcatacggct tctaatattg gacacttatt aaatatgcct aagatttagc caaaccattt
     4561 cttccagatg gatgttttgg ctggttctgc cttatgcggt tacgattaac cgaccgatgc
     4621 cgtctgaaag ggtttccgct tcagacggca tcgcgccgga acagggaggg gatatgaaaa
     4681 aaccgaaaat cctttttgtc tgcctcggca acatctgccg ttcgccgatg gcggaataca
     4741 ttttgcgccg ccgcgccgcc gaagcgggca ttccccttga agcggacagc gcggggacat
     4801 cgggctggca cgacggcgaa gatatgcacc gcgagacggc aaagatattg aaaaaacacg
     4861 gtatcgatgc ttcaggcttt accagccgca aaatctgcca aagcgatgcg gcggcgtttg
     4921 actgcatcat cgcgatggac ggcaagaatt tgtccgaatt ggaaagaacc ttcggcaggc
     4981 ggccggaaaa aatattcaag ctgaccgacc tgatacccga aagcggttac gaccatgtcc
     5041 ccgatccgtg gtatacgggc gattttgaag aaaccttcag gcttgcggat gcgggctgtc
     5101 gggcattgtt ggaaaagatt tccaaataaa gcaattgaat acaaatataa aaccgcctcc
     5161 tgccgtatcg gttgttcaga cggcataaac agagaattta tgaaaacaaa tttcaaacag
     5221 aaaattatcg aacaggcacg cagcgaaggc ttgcaggtaa ccgctttgcg cgagcaggta
     5281 ttagatattg tcttgcagca aagcggcgtg attaaagcct acaacgtctt gtcgcagatg
     5341 cagcagcaaa gcgagggcgt gcttgcgccg ccgaccgcct accgcgccct tgatttttgg
     5401 gcggagcagg gcgttttgca caaagtggcg gcggtcaacg gctatatttt gtgcagccac
     5461 gcgcagcacg agtgcgacga ccattgccac gaccacgaag aagccgaagc gcaccacagc
     5521 gcgtttattt tggtctgcac cgaatgcggc acggcggacg agcaaaccct cagccacgag
     5581 tgggcggcac tgcgcgcagg cgttgccgaa agcggctttg cgctgaaaga agaacacgtt
     5641 gttttaactg ggatttgtaa aaaatgtcag aagtgaaaaa aaccaaagtc cacctgattt
     5701 caggttttct gggaacaggc aaaaccactg cgctcaaaag cctgatggcg caaaaagacc
     5761 cgaacgaaaa atgggtcatc atcgtcaacg agttcggcga aatcggcatt gacggcgcgg
     5821 tattgagcga caacggtatc cctgtggcag aaatcgccgg cggctgtttg tgttgcaccg
     5881 ccggcccgca aatgggcgta accgtgcaga aaatgctgcg cgacgccaag cccgaccgcc
     5941 tgatgattga agcaagcgga ctggctcacg cagccagcgt catcgacgaa ctcaaagcca
     6001 aaccgctgga cagccttttg gaaatcggcg ccgtctttac cgtcgtcaat ccgcgccagt
     6061 tcatcaaccc cgattacgcg caacaggcgt tgtataaaga ccaaatcggc atctgcgacg
     6121 tattggtcgc cagcaaaacc gatttatgca ccaccgaaca gcttgccgaa tttcacgaca
     6181 aagcggcaaa actgttcccg cccaaagcca aagtggtcga agtccaaaac gcacaactcg
     6241 acatccggtg gctcgatatt cccgtcatcg aaaaatcacg ctaccgcctc aaagccctgc
     6301 cggacaacac catgggcttc cagtcgcaag gtttcacatt ccccgccgga cgcgatttcg
     6361 acggcgaaaa gctgaccaac tttttcaacg acctgcccaa aatgaccgaa ggactcgtcc
     6421 gcgccaaagg cgtgtttcaa gtattgggaa cgtgggtgtg gctcaactgg gtagacggac
     6481 agtggggcgc gaaccaagtc tcatggcggc gcgattcgcg ttttgaattg attgccaaat
     6541 cgtttgatgc ggatttaatc gaacaaaaac ttaaagatgc attggaatag cgttaacgcg
     6601 ctttcagacg gcatatgaaa tgaaaatgcc gtctgaaggt ctgaggagga tgggatgaaa
     6661 cccaaattta aaaccgtttt aaccgcgctg cttttggcgg tttccctgcc gtctatggcg
     6721 gcaacccatg ttttgatgga aaccgatatg ggcaatatcc gtttggtttt ggacgagtcc
     6781 aaagccccca aaaccgttgc taatttcgtg cgctatgccc gaaaaggctt ttacgacgac
     6841 accgtttttc accgcgttat cgacggtttc gttatccaag gcggcggatt taccgaagac
     6901 ttggtacaaa aggcaaccga taaagccgtt gccaacgaat ccggcaacgg cttgaaaaac
     6961 accgccggca ccatcgccat ggcgcggacg gcagaccccg attccgccac cagccaattc
     7021 tttatcaatc tcgcggacaa cgcttcgctc gactacaaaa acggacaata cggctatacc
     7081 gttttcggca gggtcgaaag cggaatggac acagtttcca aaatcgcccg cgtcaaaacc
     7141 gccacgcgcg gcttttatca aaatgtaccc gtacagcccg tcaaaatccg tcgcgttgtt
     7201 gtcggacagt aacacgcaga cagacgttca gacggcgtcg cccgtttcac aaaaaacgcc
     7261 gtctgaagtg aaaaaatatt ttaaaacaga cagttgatat tgacaaattc aaaccgagga
     7321 ttttaaaatg ct
//
LOCUS       DAWITQ010000098         7322 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.098, whole genome shotgun sequence.
ACCESSION   DAWITQ010000098 DAWITQ010000000
VERSION     DAWITQ010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7322)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7322)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7322
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.098"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(355..1614)
                     /gene="rho"
                     /locus_tag="WIX18_001501"
     CDS             complement(355..1614)
                     /gene="rho"
                     /locus_tag="WIX18_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEZ5238595.1"
                     /translation="MHVSELQTLHISKLLELAEEHGIENANRFRKQDLVFAIVRQMMK
                     KGEGFTCSGTLEILPDGFGFLRSADTSYLAGPDDIYVSPTQIRRFNLHTGDTIEGSVR
                     VPKDNERYFALVRLDTINGDHPEVCRHKILFENLTPLFPTEQLKLERDLKSEENLTGR
                     AIDLISPIGKGQRALLVAPPKSGKTVMLQNIAHAVTANYPEVELIVLLIDERPEEVTE
                     MSRSVRGEVVSSTFDEPAQRHVQVAEMVLEKAKRMVEHKKDVVILLDSITRLARAYNT
                     VVPTSGKILTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVETGSRMDDVIYEE
                     FKGTGNMELHLDRRMAEKRLFPAININKSGTRREELLVPNDQLQRMWLLRKFLHPMDE
                     IEAAEFLIGKIKASKNNDDFFELMRGK"
     gene            complement(1834..4218)
                     /gene="ppsA"
                     /locus_tag="WIX18_001502"
     CDS             complement(1834..4218)
                     /gene="ppsA"
                     /locus_tag="WIX18_001502"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HEZ5238596.1"
                     /translation="MADNYVIWFENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGG
                     FATTAEAYRAFLAHNGLSERISAALAKLDVEDVAELARVGKEIRQWILDTPFPEQLDA
                     EIEAAWNKMVADAGGADISVAVRSSATAEDLPDASFAGQQETFLNINGLENVKEAMHH
                     VFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYDQVVF
                     VTSSYGLGENVVQGAVNPDEFYVFKPTLKAGKPAILRKTMGSKHIKMIFTDKAEAGKS
                     VTNVDVPEEDRNRFSITDEEITELAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQAR
                     PETVKSQEEGSRNLRRFAINGDKTVLCEGRAIGQKVGQGKVRLIKDASEMDSVEAGDV
                     LVTDMTDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATELLENGQE
                     VTVSCAEGDTGFIYAGLLDVQITDVALDNMPKAPVKVMMNVGNPELAFSFANLPSEGI
                     GLARMEFIINRQIGIHPKALLEFDKQDDELKAEITRRIAGYASPVDFYVDKIAEGVAT
                     LAASVYPRKTIVRMSDFKSNEYANLVGGNVYEPHEENPMLGFRGAARYVTDNFKDCFA
                     LECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCEL
                     PSNAVLAEQFLQYFDGFSIGSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAIS
                     ACRKQNKYVGICGQGPSDHPDFAKWLVEEGIESVSLNPDTVIETWLYLANELNK"
     gene            4629..5450
                     /locus_tag="WIX18_001503"
     CDS             4629..5450
                     /locus_tag="WIX18_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase/pyrophosphorylase"
                     /protein_id="HEZ5238597.1"
                     /translation="MSSPRHVFYISDRTGLTAENIGEALLNQFGNLSFKRHTHPFVDT
                     PEKARAVVEKVNRSRQENGQRPIAFVSVVDDEIRRIIKGADAFQINFFETFLGLLEKE
                     LNTEATASEQGHHSIGNTKRYDARMEAVNFSLNHDDGVSDKNLQEADVILMGVSRSGK
                     TPTCLYLALQYGIRAANYPLIPDDLESADLPRMVKPYRDKLFGLTIQPERLQAIRQER
                     RPNSTYAKIDTCRSEVADAQSMFRRHGIPFANTTDKSVEELAVHILQACKLKRRF"
     gene            complement(5690..6352)
                     /locus_tag="WIX18_001504"
     CDS             complement(5690..6352)
                     /locus_tag="WIX18_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ5238598.1"
                     /translation="MIHAVLFDLDGTLADTALDLGGALNTLLARHGLPAKSMDEIRTQ
                     ASHGAAGLIKLGAGITPDHPDYARWRTEYLEEYDRRYAQDTELFDGVNELIAELNQRG
                     IKWGIITNKPMRFTDKLVPKLGFIIPPAVVVSGDTCGEPKPSIKPMLYACGQIHADPQ
                     HTLYVGDAERDIQAGRNAGMKTVLAEWGYISDEDDTDSWQADFHIRTPLDLLECLDKI
                     QP"
     gene            complement(6365..7192)
                     /locus_tag="WIX18_001505"
     CDS             complement(6365..7192)
                     /locus_tag="WIX18_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEZ5238599.1"
                     /translation="MKLDIYALLERALLSGDPDEKGRLTDEAFAAVQNMDGAETNTPP
                     ADFPRAGRPDKPVLVAPSQLTPRKMNTAEGYAAMLHAIAHIEFNAVNLALDAAYRFRT
                     LPFQFVRDWVKVAKEEVYHFRLMRDRLRAFGFDYGSFEAHNHLWDMAYKTAYDPLLRM
                     ALVPRVLEARGLDVTPGIRAKVAQRGDSETCGVLDIIYRDEVGHVAIGNHWYQHLCRE
                     RGLEPVALFRSLITRYDMFIFRGYVNIEAREKAGFSRFELDMLEDFEQGLKQNKNTV"
BASE COUNT         1522 a         1759 c         2153 g         1888 t
ORIGIN      
        1 agttcaatga gtttattttg tttatactgg cttagacgac tttttctcat aggggcaact
       61 ctaacttaat ttgaatttcc ctagttatct aggacagccc caaatttata caaaaatgag
      121 cgcggttcgg cgcaaccttg aatcaagttc ccgcatcggt tttcattgcc ggtacggatg
      181 cgttcaagcc ggttttgcaa aggccgcgct ttcggcaagc ggacacggac actgccggcg
      241 gttgcgccgt taacgggggg agggaggagc tgcgccggcc gtgtgaatga aagtgccgtc
      301 tgaaacccga ttttcaggtt tcagacggca tttcgcctaa tgtcgatgat gtgtttattt
      361 tccgcgcatc agttcaaaga aatcatcatt gtttttagag gctttgattt ttccgattaa
      421 aaattcggct gcctcgattt cgtccatcgg gtgcaggaac ttgcgcagca gccacatacg
      481 ttgcagctgg tcgttcggca caagcagctc ctcgcggcgc gtgccggatt tgttgatgtt
      541 gatggcgggg aagagacgtt tttccgccat acggcggtca aggtgcaatt ccatattgcc
      601 ggtgcctttg aattcttcgt aaatcacatc gtccatacgg ctgccggttt caaccaatgc
      661 tgtggcgatg atggtcagcg aaccgccttc ttccacgttg cgcgccgcgc cgaagaaacg
      721 tttggggcgg tgcagcgcgt tggcatcgac accgccggtc aggattttgc ccgaggtagg
      781 cacgacggta ttgtaggcgc gggcaaggcg ggtaatcgaa tcaagcagga tgaccacatc
      841 ttttttgtgt tctaccatac gcttggcttt ttcaagcacc atttcggcaa cttggacgtg
      901 gcgttgagcc ggctcgtcaa aggtggagga gactacttcg cctcggacgg aacggctcat
      961 ttcggttact tcttcgggac gctcgtcaat caagaggacg atgagttcga cttcgggata
     1021 gtttgcggta acggcgtggg caatgttttg cagcatcacg gttttaccgc ttttgggcgg
     1081 ggcaaccaag agggcgcgct gacctttgcc gatgggggaa atcaggtcga tagcacgtcc
     1141 ggtcaggttt tcttcggact ttaagtcgcg ttccagcttc aactgttcgg tcggaaacag
     1201 cggggtcagg ttttcaaaca ggattttatg gcggcatact tccgggtggt cgccgttgat
     1261 ggtatcaagc ctgaccaggg caaaatagcg ttcgttgtct tttgggacgc gcacgcttcc
     1321 ttcgatggtg tcgcccgtat gcaggttgaa gcggcggatt tgggtgggtg agacatagat
     1381 gtcgtcggga ccggcaagat aggacgtgtc cgcgctgcgg aggaagccga agccgtcggg
     1441 caggatttca agcgtgccgg agcaggtgaa accctcgcct tttttcatca tctggcggac
     1501 gatggcaaat acgaggtctt gtttgcggaa tcggttggcg ttttcgatgc cgtgttcttc
     1561 cgccaattct aagagtttgg aaatgtgcag ggtttgtaat tcggagacgt gcataataat
     1621 gatgtatttt gaagaggaaa aagacaggca gatgccgtct gaaagaagaa gctgaccgtt
     1681 gccggttgct cggggaaggg ggaattgtag gcagtcggcg cgtgggtgtc aaatattatc
     1741 gcggacgggg catcggcaga aaatgccgtc tgagcggagc tgcttggaaa aaaatacccc
     1801 cgcgcttttc aggctcgggg gtatgggcat tgattatttg ttcaattcat tcgccaaata
     1861 cagccaagtt tcgatgacgg tatccgggtt cagggaaacg ctttcgatac cttcctcaac
     1921 cagccatttg gcgaagtccg gatggtcgga cgggccttga ccgcagatgc cgacatattt
     1981 gttctgcttg cggcaggcgg agatggcaag gtgcagcatc actttgacgg cagggttgcg
     2041 ttcgtcaaac gattcggata ccaagccgct gtcgcggtcg agaccgaggg tcagttgggt
     2101 catgtcgttc gagccgatgg agaagccgtc gaagtattgc aggaattgtt ccgccaatac
     2161 cgcgttgctc ggcagctcgc acatcataat caggcgcagg ccgtttttgc cgcgttccaa
     2221 gccgttttct ttcagggctt tgacaacggc ttcggcttcg cccaaagtgc ggacgaacgg
     2281 aatcatgatt tcaacgttgg tcagacccat ttcatcgcgg acgcgtttca aggctttgca
     2341 ttccaaggcg aaacagtctt tgaagttgtc ggtgacataa cgcgccgcgc cccggaagcc
     2401 caacatcggg ttttcttcat gcggttcgta tacgttgccg ccgaccaggt tggcgtattc
     2461 gttggatttg aagtcggaca tacggacgat ggttttacgc ggataaaccg atgcggccaa
     2521 tgtcgccacg ccttcggcga ttttatcgac gtagaagtcg acaggggacg cgtaaccggc
     2581 gatacggcgg gtaatttccg cttttaattc gtcgtcttgt ttgtcaaatt ccaacaaggc
     2641 tttcgggtgg ataccgattt ggcggttgat gataaattcc atacgcgcca agccgatgcc
     2701 ttcgctgggc aggttggcga agctgaatgc gagttcgggg ttgccgacgt tcatcatgac
     2761 tttgacgggt gctttgggca tattgtccaa ggcgacatcg gtgatctgta cgtccaacag
     2821 gccggcatag atgaagccgg tatcgccttc ggcgcaggat acggtcactt cctgaccgtt
     2881 ttccaagagt tcggtcgcat tgccgcagcc gacgacggca ggaataccca gttcgcgcgc
     2941 gatgatggcg gcgtggcagg tacggccgcc gcggttggtc acgatggcgg aagcacgttt
     3001 catcaccggt tcccaatccg ggtcggtcat atcggtaacg agtacgtcgc cggcttcgac
     3061 ggaatccatc tcggaagcat ctttaatcag gcgtaccttg ccctgaccga ctttctgacc
     3121 gatggcacgg ccttcgcata atacggtttt atcgccgttg atggcgaagc ggcgcaggtt
     3181 gcggctgcct tcttcctggg atttgacggt ttcggggcgg gcttgcagga tgtagagttt
     3241 gccgtccaag ccgtcgcgtc cccactcgat gtccatcggg cggccgtagt gtttttcgat
     3301 ggtcagtgcg taatgcgcca actcggtgat ttcttcgtcg gtaatggaga agcggttgcg
     3361 gtcttcttcg gggacatcga cgttggttac cgatttgccg gcttcggctt tgtcggtaaa
     3421 aatcattttg atgtgtttcg aacccatggt tttacgcagg atggcgggct tgcccgcttt
     3481 gagcgtgggt ttgaacacat aaaattcgtc cgggttgacc gcaccttgta cgacgttttc
     3541 gcccagaccg taagaggagg taacaaagac gacttgatcg tagccggatt cggtgtcgag
     3601 ggtgaacatc acacctgatg cgccgctgtc ggaacgcacc atgcgttgaa cgccggcgga
     3661 aagggcgacg atatcgtgtt cgaagccttt gtggacacgg taggaaatgg cgcggtcgtt
     3721 gtacagggag gcgaatacat ggtgcatcgc ttctttaacg ttttccaatc cgttgatgtt
     3781 caagaaggtt tcctgttggc cggcaaatga tgcgtcgggc aggtcttcgg cggttgcgga
     3841 agagcgtacg gcaacggaaa tgtccgcgcc gccggcatcg gcaaccattt tgttccatgc
     3901 cgcttcgatt tcggcatcga gctgttcggg gaagggtgtg tccaaaatcc attggcggat
     3961 ttctttgccg acgcgtgcca gttcggcaac gtcttcgaca tccaattttg ccagtgcggc
     4021 ggaaatgcgt tcgctcagac cgttgtgtgc gaggaatgcg cggtaggctt cggctgtggt
     4081 ggcaaagccg ccggggacgc gaacgccttt ttcggtcagc tgactgatca tttcgcccag
     4141 cgaggcgttt ttaccgccca cgcgttcaac atctgtcata cgcaggtttt caaaccaaat
     4201 tacgtagttg tcggccattt gtgtgtccaa tccaaaatat gttaaaaaag aaacaaatcc
     4261 gcgtgcttat tttaagcgat tcgttcctct gctgtcatgt gttttatccg ttttaaaatc
     4321 atgatgccgt ctgaaaaatt gcggtttcgg cgtgtgtagc ggtttgaaac ttgcagccgg
     4381 tatacttctt tttttgggta ttttctttgt aaaacaggtg gtttgaatag gttaatgttt
     4441 tttctgtttg atttttttgt ttatttttta aaattttctg ccaaaaaata ctttatataa
     4501 ataattttat ttcaaaatta tattgtgtct gtttgggtgt aatccgaggt aggcgtgctg
     4561 cgggtgcttt ccttgtgtct gccgctgctg ttatgatgat atttttattc tgtatttaag
     4621 gatggaagat gagcagtccg cgccatgtgt tttacatttc cgaccgtacc ggtctgactg
     4681 ccgagaatat cggcgaggct ttgctgaacc agtttggcaa tctgtcgttc aaacgccata
     4741 cgcatccgtt tgtcgatacg ccggaaaagg cgcgcgcggt ggtggagaag gtcaatcgga
     4801 gccggcagga aaacggtcag cgtccgattg cgtttgtcag tgtggttgat gacgaaatcc
     4861 gtcggattat caaaggggcg gatgcttttc agattaattt ctttgagact tttttgggac
     4921 tgttggagaa agaactcaat accgaagcca cggcatccga gcaggggcat cacagtatcg
     4981 gtaatacgaa gcgttacgat gcgcgtatgg aggcggtaaa tttctcattg aaccacgatg
     5041 acggggtcag cgataagaac cttcaggaag cggatgtaat cttgatgggt gtatcgcgtt
     5101 cgggcaaaac gccgacctgc ctttacctcg ccctgcaata cggcatccgt gcggcaaact
     5161 atccgctgat tcctgacgat ttggaatcgg ccgatctgcc gcgtatggtc aagccttata
     5221 gggataagct gttcgggttg accatccagc cggaacgttt gcaggccatc cgccaagagc
     5281 gccgcccgaa ttcaacttat gccaaaatcg atacatgccg cagcgaggtg gcagacgcgc
     5341 agagtatgtt cagacggcat gggattccgt ttgcgaatac gacggataaa tcagtggaag
     5401 agcttgccgt acacatcctt caggcgtgca agctcaaacg caggttttga cgggttttga
     5461 ttcggtttga aggtggaaat gccgtctgaa atcaggtttc agacggcagt tttatagtgg
     5521 attaacaaaa atcatgacaa ggcgacgaag ccgcagacag tacaaatagt acggagccga
     5581 ttcacttggt gcttcagcac cttagagaat cgttctcttt gagctaaggc gaggcaacgc
     5641 tgtactggtt tagatttaat ccactatatg tttgtggggc ggatattttt cagggctgta
     5701 ttttgtccag acattcgagc agatcgagcg gcgttcggat gtggaaatcc gcctgccatg
     5761 agtcggtatc gtcttcatct gagatgtagc cccattcggc gaggacggtt ttcatgccgg
     5821 cgttgcggcc tgcttggatg tcgcgttcgg catcaccgac gtagagtgtg tgttgcgggt
     5881 cggcgtggat ttgtccgcac gcatacagca tgggtttgat gctgggcttg ggttcgccgc
     5941 aggtgtcgcc gctgacgacg acggcgggtg ggatgatgaa gccgagtttg gggacgagtt
     6001 tgtcggtgaa gcgcatgggt ttgttggtga tgatgcccca tttgatgccg cgttggttga
     6061 gttcggcaat gagttcgttc acgccgtcaa agagctcggt gtcttgggcg tagcggcggt
     6121 cgtattcctc cagatattcg gtgcgccatc gggcatagtc ggggtggtcg ggggtgatgc
     6181 ctgcgccgag tttgatcagt cctgccgcgc cgtggctggc ttgggtgcgg atctcgtcca
     6241 tgctttttgc aggtagtccg tggcgagcga gcagggtgtt gagtgcgcct ccgaggtcga
     6301 gggcggtgtc ggcaagtgtg ccgtcgaggt cgaagagtac ggcgtgtatc atgtgtgttc
     6361 cttttcagac ggtatttttg ttctgtttca aaccctgctc gaaatcttcc agcatatcca
     6421 attcaaagcg gctgaagccc gctttttcgc gcgcttcgat gttcacatag ccgcggaaga
     6481 taaacatatc gtaacgggta atcagactgc ggaacagggc gacaggttcc aaaccgcgtt
     6541 cgcggcagag gtgttgatac caatggttgc cgatggcgac atggcccact tcgtcgcggt
     6601 aaatgatgtc caatacgccg caggtttccg aatcgccgcg ctgcgccacc ttcgcgcgta
     6661 tccccggcgt aacgtccagc ccgcgcgctt ccaacacgcg cggtaccaac gccatacgca
     6721 acagcgggtc gtaggcggtt ttgtacgcca tatcccacaa atggttgtgc gcctcgaaac
     6781 tgccgtaatc gaagccgaaa gcgcgcaatc tgtcgcgcat caggcggaaa tggtacacct
     6841 cttccttcgc cactttcacc cagtcgcgga caaactgaaa cggcagcgtg cggaaacggt
     6901 atgccgcgtc caaagctaga ttgacggcgt tgaattcgat atgcgcaatc gcgtgcagca
     6961 tcgccgcata gccttctgcc gtgttcattt tgcgcggggt cagttgcgac ggcgcgacca
     7021 aaacaggctt gtccggccgt cccgctcggg ggaagtccgc cggcggcgtg tttgtttcag
     7081 caccgtccat gttctgaacg gcggcaaacg cctcatccgt cagccgtcct ttttcatctg
     7141 ggtcgcccga aagcagggcg cgttccagca aagcataaat atcgagtttc atctcaagtc
     7201 cgccgtgttc ggaaaacaaa tattatagcg ttttaaaaaa aacaagatga ggcatataat
     7261 ctccgcgatt cggcattccg cgcccaaacc gtcaaatata gtggattaac aaaaaccggt
     7321 ac
//
LOCUS       DAWITQ010000099         7261 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.099, whole genome shotgun sequence.
ACCESSION   DAWITQ010000099 DAWITQ010000000
VERSION     DAWITQ010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7261)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7261)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7261
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.099"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(100..912)
                     /locus_tag="WIX18_001506"
     CDS             complement(100..912)
                     /locus_tag="WIX18_001506"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HEZ5238600.1"
                     /translation="MENIGRQRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARV
                     PYGTKSKATIENFSMQIVDFLLEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVIS
                     AGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGW
                     LEHEVTRLTVCEYLKPLLADGIDTLVLGCTHFPLLKPLIGREAGNVALVDSAITTAEE
                     TARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLGRTMEQIEMVSLG"
     gene            1114..1575
                     /gene="tsaE"
                     /locus_tag="WIX18_001507"
     CDS             1114..1575
                     /gene="tsaE"
                     /locus_tag="WIX18_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HEZ5238601.1"
                     /translation="MSDLPSISRFLADEAATLDLGAAWSSRLNAPLVIYLEGDLGAGK
                     TTLTRGILRGLGHQGAVKSPTYAIVESYPLERFTLHHFDLYRFSFPEEWEDAGLDELF
                     AANSVCLIEWPQQGGEFTPPADITATLTHDGDGRKCLLTAHTERGRESLPL"
     gene            1572..2822
                     /locus_tag="WIX18_001508"
     CDS             1572..2822
                     /locus_tag="WIX18_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEZ5238602.1"
                     /translation="MTKLTRRQIIRRTAGTLFALSPIASAVAKTVRAPQFTAARIWPS
                     HTYTRLTLESTAALKYQHFALDNPSRLVVDIQNANINTVLHGLSQKVMADDPFIRSIR
                     AGQNTPTTVRLVIDLKQPTHAQVFSLSPVSGFKNRLVVDLYPQGMDPDDPMMALLNGS
                     LNKTRRGSPEADLAQNTPAQTERGKNGRRPVIMIDPGHGGEDPGAVSPGGLQEKHVVL
                     SIARETKKQLEALGYNVFMTRNEDVFIPLGVRVAKGRARRADVFVSIHADAFTSPSAR
                     GTGVYMLNTKGATSSAAKFLEQTQNNADAVGGVPTSGNRNVDTALLDMTQTATLRDSR
                     KLGKLVLEELGRLNHLHKGRVDEANFAVLRAPDMPSILVETAFLSNPAEEKLLGSESF
                     RRQCAQSIASGVQRYLNTSVLKRG"
     gene            complement(2880..4022)
                     /locus_tag="WIX18_001509"
     CDS             complement(2880..4022)
                     /locus_tag="WIX18_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HEZ5238603.1"
                     /translation="MNTLYTLFATCPRGLETVLSQELESLGCTDVQVFDGGVSCRGGL
                     EQVYAANLHSRTASRILLRLTKGTYRNERNIYKLAKNINWFNWFTLQQTFKVKVEAKR
                     ANVKSIQFVGLTVKDAVCDAFRDIYDARPSVDKAAPDVRIHAFLDERNVEIFIDTSGE
                     ALFKRGYRLDTGEAPLRENLAAGLLLSAGYDGTQPFQDPFCGSGTIAIEAAWIAARRA
                     PGMMRRFGFEKLQNFDKTLWSDLRRRAEAQVKPAFAPISGSDSDRRIIQTALANARSA
                     GVDDIVSFSVADAQSVRPNGVGGIMVSNPPYGVRLEEVRALQALYPQLGTWLKKYYAG
                     WLAAMFTGDREMPKFMRLSPKRKIPLYNGNLDCRLFLIDMVEGSNR"
     gene            complement(4071..4493)
                     /locus_tag="WIX18_001510"
     CDS             complement(4071..4493)
                     /locus_tag="WIX18_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238604.1"
                     /translation="MNKNRKLLLAALLLIAFAAVKLVLLQWWQAQQPQAVAAQCDLTE
                     GCTLPDGSRVRAAAVSTKKPFDIYIEHAPAGTEQVSISFSMKNMDMGFNRYMFERQPS
                     GTWQAVRIRLPICVEGRRDFTADITIGSRTFQTAFTAE"
     gene            complement(4486..5295)
                     /locus_tag="WIX18_001511"
     CDS             complement(4486..5295)
                     /locus_tag="WIX18_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEZ5238605.1"
                     /translation="MIQDTRPLIRVVAGILLDSDGNYLLSSRPEGKPYAGYWEFAGGK
                     VEAGETDFQALQREFEEELGIRILAATPWLTKIHSYEHARVCLKFLWVNPDQWTGEPQ
                     SREGQEWSWQKAGDFTVAPMLPANGALLRSLSVPRRLYGSLKTGLHGENSMGAYRVLP
                     LGSAEGSGANVLMEAAQWQDRPEYAGSVWMMVQTREQWRQAQEKGADVVVWRVGNAAQ
                     AAAVDEVLKHGVSVPLVLAANGQTVARYGKLWLGLGAHVVVRDETIGKNHE"
     gene            complement(5377..5754)
                     /locus_tag="WIX18_001512"
     CDS             complement(5377..5754)
                     /locus_tag="WIX18_001512"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HEZ5238606.1"
                     /translation="MIYGIGTDIVSLKRIIRLNKKFGQAFAGRILTPEELLEFPQAGK
                     PVNYLAKRFAAKEAFAKAVGTGIRGAVSFRNIGIGHDALGKPEFFYGPALSKWLEEQG
                     ISRVSLSMSDEEDTVLAFVVAEK"
     gene            complement(5954..6720)
                     /locus_tag="WIX18_001513"
                     /pseudo
     CDS             complement(5954..6720)
                     /locus_tag="WIX18_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013107841.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
     gene            complement(6730..>7261)
                     /locus_tag="WIX18_001514"
     CDS             complement(6730..>7261)
                     /locus_tag="WIX18_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEZ5238607.1"
                     /translation="DITFSEDVGECPLHSDSSFSENPESYLVMYVVKSANDGGNSLFL
                     SSSDIVNQLSKTETGKKHLKTLTGNLYPFKTPASFDKKQGVRWGNILSVNTQMIRFRS
                     DCIYKGIEENRNKVSKEMVLALDYLVNVIKNASDIQEFSAQDDGLIIIDNVNGLHART
                     DYTDKNRHYIRARITV"
BASE COUNT         1754 a         2000 c         1775 g         1732 t
ORIGIN      
        1 ccgagaaatt accttagcat tgaatgtcta gattcccgcc tgcgcgggaa tgacgggatt
       61 ttaggtttct gtaatctcgg gcagctttcc gtcatcgttt taacccaaag acaccatttc
      121 aatctgctcc atcgtcctgc ccagaaaacg ctcgccgatg gttctgaatt tcaaaggaat
      181 atcgctgacg taaaaacggt agtcgggatt gttgttgtcg gtattgagca atccttcctg
      241 agcaaggacg cgtgcggttt cttcggccgt tgtaattgca gaatcaacca acgcgacatt
      301 gcccgcctcc ctgccgatta agggcttgag caagggaaag tgcgtgcagc ccaacaccag
      361 cgtatcgatg ccgtctgcaa gcaatggttt gaggtattcg catacggtca ggcgggtaac
      421 ttcgtgttcc aaccagccct cttccaccaa agggacgagc agcggcgcgg cctgcgtgcg
      481 gacgagcgta tcggggttgt tcctgtggat ggcgcgcgca taagcattgc tgttaactgt
      541 ggtattggtg gcgataatgc cgattttatt gttgcgcgtc gttgccagcg cggctttcgc
      601 gccggcggaa atcacgtcca acacaggcat attgcccgtc ttttgacgga ttttctgccc
      661 cgccaccgcc gcaatcgtat tgcacgcgat aaccatcgcc ttaacatcgt gttccaataa
      721 aaaatcgaca atctgcatcg agaaattttc gatggtagcc ttagatttcg tcccgtaagg
      781 cacgcgcgcc gtgtcgccga aataaatgat gttctccatc ggcagccgct ccatcagcgc
      841 gcgtacattg gtcaaaccgc cgattcccga gtcaaaaacg ccgatgggtc gctgcctgcc
      901 gatattttcc atcctttttc caatccgtcc taaacataca atccgcgtat tgtacacgcg
      961 ccgctttttc ttgacagccg ttgccgtctg aaagcagaac gcggatttgg ctgttataat
     1021 gctcggacaa gaagcatccg cccctcgggt gcaaagtttg caaaacctgc aaaactgccc
     1081 ataataccct agaccttaca acaaaccgtt tccatgtctg atttaccctc tatctcccga
     1141 ttccttgccg acgaagccgc cacactcgat ttgggcgcgg cgtggtcttc ccgtttaaac
     1201 gcaccgctgg tcatttatct cgaaggggat ttgggtgcgg gcaaaaccac gctgacacgc
     1261 ggcatcctgc gcggattggg tcatcagggc gcagtcaaaa gcccgaccta cgccatcgtc
     1321 gaatcttatc cgctggaacg cttcaccttg caccatttcg acctctaccg cttctcgttc
     1381 cccgaagaat gggaagatgc cggattggac gaactgtttg ccgcaaacag cgtctgcctg
     1441 atcgaatggc cgcaacaggg cggggaattt acgccgcctg ccgacatcac cgcaacattg
     1501 acacacgacg gcgacggcag aaaatgcctg ctgaccgccc ataccgaacg aggacgcgaa
     1561 agcctgccgc tatgaccaaa ctgacacgaa gacaaatcat ccgccgcacc gccggcacac
     1621 tgttcgccct aagccccatc gcatccgccg ttgccaaaac ggtacgcgca ccacaattca
     1681 ctgccgcacg gatatggcca tcgcacacct acacccgcct gacgctggaa agcaccgccg
     1741 cgctcaaata ccagcacttc gcgctcgaca acccaagcag gctggtcgtc gatatacaaa
     1801 acgcgaacat caataccgta ttgcacggac tgtctcagaa ggttatggcg gacgacccct
     1861 ttatccgcag catacgcgcg ggtcagaaca caccgaccac cgtccgcctc gtcatcgacc
     1921 tgaaacagcc cacccacgca caagtctttt ccctctctcc tgtcagcggc tttaagaacc
     1981 gcctcgtcgt cgatctctat ccgcaaggga tggatcccga cgatccgatg atggcgctgc
     2041 ttaacggcag cctgaacaaa acccgtcgcg gctcccctga agccgacctc gctcaaaaca
     2101 ctcccgcaca aaccgaacgc ggcaaaaacg ggcgcagacc cgtcattatg atcgaccccg
     2161 gacacggcgg cgaagacccc ggcgccgtca gcccgggcgg tttgcaggaa aaacacgtcg
     2221 tcctctccat cgcccgcgaa accaaaaaac aattggaagc cttgggttac aacgtcttta
     2281 tgacgcgcaa cgaagacgtg ttcatcccat tgggcgtgcg tgtcgccaaa gggcgcgcac
     2341 ggcgggcgga cgtattcgtc tccatccacg ccgacgcttt caccagcccc tccgcgcgcg
     2401 gaacgggggt ttatatgctg aacaccaaag gcgcgaccag ctctgccgcc aaattcttgg
     2461 aacaaaccca aaataatgcc gacgcggtcg gcggcgtacc gaccagcggc aaccgcaatg
     2521 tcgataccgc cctgctcgac atgacccaaa ccgccacgct gcgcgacagc cgcaaactcg
     2581 gcaaactggt gcttgaagaa ttgggcaggc tcaaccatct gcacaaaggc agggtggacg
     2641 aagccaattt cgccgttttg cgcgcacccg atatgccgtc tatcctggtc gaaaccgcct
     2701 tcctgtccaa tcctgccgaa gagaagctgc tgggcagcga atccttccgc cggcagtgcg
     2761 cccaatccat cgcctcgggt gtccaacgct acctcaatac atccgtattg aagcggggtt
     2821 gattccgaaa aataaatgcc gtctgaacat ttttcagacg gcatttttgt acactttcct
     2881 caacggttcg atccttccac catatcaatc aggaacaggc ggcaatcgag gttgccgtta
     2941 taaagcggaa ttttgcgttt tggcgacagg cgcatgaatt tgggcatttc ccgatctccg
     3001 gtaaacattg ccgccaacca gcctgcgtaa tatttcttca accacgtccc caactgcgga
     3061 taaagcgcct gcaaggcgcg gacttcctca aggcgcacgc cgtagggcgg attggacacc
     3121 ataatgccgc ccacgccgtt cggacggacg gattgcgcgt cggcaacgct gaaggaaacg
     3181 atgtcgtcca ccccggcact gcgtgcgttg gccaatgccg tctgaatgat gcggcggtcg
     3241 ctgtcgctgc ccgaaatcgg tgcaaaagcc ggtttaacct gcgcttcggc acggcggcgc
     3301 aaatccgacc acagcgtttt atcgaaattt tgcagttttt caaaaccgaa acggcgcatc
     3361 atacccggcg cgcggcgggc ggcaatccaa gcggcttcga tagcaatcgt gccgctgccg
     3421 caaaacgggt cttgaaacgg ctgcgtgccg tcgtagcctg ccgagagcag caatccggcg
     3481 gcaaggtttt cgcgcagcgg ggcttcgccg gtatcgagac ggtagccgcg tttgaacagg
     3541 gcttcgcccg aagtgtcgat gaagatttcg acattgcgtt cgtccaaaaa ggcgtggatg
     3601 cgaacatcgg gcgcggcttt gtccacgctc ggacgtgcgt cgtaaatgtc gcggaaagcg
     3661 tcgcagacgg catctttgac ggtcagtccg acaaattgga tgctcttaac gttggcacgc
     3721 tttgcctcga ctttgacttt gaacgtctgc tgtaaagtaa accaattaaa ccagttgata
     3781 tttttggcga gtttgtagat gttgcgctca ttgcggtatg tccctttggt caggcgcagc
     3841 aggatacggc tggcagtacg cgaatgcagg ttggcggcgt aaacctgttc caatccgccc
     3901 cggcaggaaa cgccgccgtc aaacacttgt acatcggtac agccgaggct ttcgagttct
     3961 tgagataaaa cggtctccaa gccgcgcggg caggtggcga aaagtgtata taaagtattc
     4021 ataacgtgtc ctttccggac ggatgttccg gcaatggcgg attgaaaggt ttattcggcg
     4081 gtaaatgccg tctgaaatgt ccgactgccg attgtaatgt ctgccgtaaa atcgcgcctg
     4141 ccttcgacac agatgggcag gcggatgcgt actgcctgcc aagtccccga cggttgccgc
     4201 tcgaacatat agcggttgaa acccatatcc atatttttca tactgaagct gatgctgacc
     4261 tgttccgtgc cggcgggcgc gtgttcgata taaatatcaa acggtttttt ggttgaaacg
     4321 gcggcggcgc ggacgcggct tccgtccggc agcgtgcaac cctcggtcaa atcgcattgc
     4381 gccgccacag cttgcggctg ctgcgcctgc caccattgca acaaaacgag cttgacggcg
     4441 gcaaaggcaa tcagcagcag tgcggcaagc agtaatttac ggtttttatt catgattctt
     4501 ccctattgtt tcatccctta ccaccacgtg cgcccccaat ccgagccata gttttccata
     4561 acgtgcaacc gtctgtccgt ttgctgcaag tacgagcggc acggatacgc cgtgcttcaa
     4621 cacttcgtct accgctgcgg cttgtgcggc attaccgact cgccagacga ccacatccgc
     4681 gcccttttcc tgcgcctgcc gccattgttc gcgggtctgc accatcatcc acacgctgcc
     4741 ggcgtattcg ggtctgtcct gccattgcgc cgcctccatc aaaacgttcg caccgcttcc
     4801 ctctgccgaa cccaaaggca ggacgcggta cgcgcccata ctgttttctc cgtgcaaacc
     4861 cgttttcagg ctgccgtaca aacggcgcgg gacggacagc gaacgcaaaa gcgcgccgtt
     4921 ggcgggcagc atgggggcaa cggtaaaatc acccgccttc tgccaagacc attcctgccc
     4981 ttcgcgggat tgcggttcgc ccgtccattg gtcggggttg acccatagga atttcaggca
     5041 gacgcgggcg tgttcgtagg aatggatttt ggtcaaccaa ggcgtggcgg cgaggatgcg
     5101 gatgccgagt tcttcttcaa actcgcgttg cagggcttgg aagtcggttt cgcccgcttc
     5161 gaccttgccg ccggcaaatt cccaatatcc ggcatagggt ttgccttcgg ggcgcgagct
     5221 gagcaggtag ttgccgtctg aatcgagcag gatgccggca acgacgcgga taagggggcg
     5281 ggtgtcttga atcatggcgg gtacgcggtt ggtcggtcgg agtgcaaatg agggatgggc
     5341 aatgccgtca acgggttttc cgcatttcag acggcattat ttttcggcaa cgacaaacgc
     5401 caatacggtg tcttcttcgt cgctcatgct gaggctgacg cggctgatgc cttgttcctc
     5461 cagccatttg gacagggcgg ggccgtagaa aaattcgggc ttgcccaatg cgtcatgccc
     5521 gatgccgatg ttgcggaagg aaaccgcgcc gcgtatgccc gtgccgacgg ctttggcgaa
     5581 ggcttctttg gcggcaaagc gtttggcgag gtagttgacg ggtttgcccg cttgcggaaa
     5641 ttcaagcagc tcttccggag tgaggatgcg cccggcaaac gcctgtccga attttttgtt
     5701 taagcggatg atgcgcttga gggaaacaat gtctgtgccg atgccgtaaa tcatatttgc
     5761 gctccttcgc ccttggttgc gggtagtgat gaatgtgatg atgaatgccg tcaatttctt
     5821 ggggcgttaa aatggcgtga atatccactt ttggggtttt gtcggtaaca attttcactg
     5881 taaccttttg catttgaaat tctaaaacat cgtgccaatt atttaataag gagttaaggc
     5941 atttaataat gaattaaagt ttgattaaac ccgaatgccc gattttcaga gccaatacca
     6001 ataaaacaat aaaaattaac attttaaaaa aatttgggct aatcttagtc cttaaccgaa
     6061 ttccaacata caatccaata acagacaata cggacagtaa aaatattaaa ccgtattcac
     6121 tcttatttaa taaccaatac tggtctctta gcatatatat ttgaacaatt ttcgccaaaa
     6181 gatagcatag attgcttgat tttacgatac gatttttatt ttctgtttcg ctaagcaaaa
     6241 atattaacaa tatgggagac atggcattgg ttgaaccgcc gatgatgcct gccaaaaacc
     6301 caaaaagaac catattctta ttattggcaa ctacttgaat attttttgct tttgcacata
     6361 catttaaaat accattgaca gaataataca atgtaatgat tgccatcagt aaaagcagcc
     6421 aagacactgg aagtatcaaa agcaacttca cccccaaaat gctgccaacg acgctgccga
     6481 tagcaagcaa tttataggtt tttaaataaa aacaatctct tgccaaaaac cctttttgtt
     6541 attgctgcat agaaccaaca agctcattaa caggcttggt aatgccacca aggcaacaac
     6601 cttagacaat ggcatgataa aagccaatgc ggttgtaccg agcatcggaa atcccatgcc
     6661 tgtaattccg tgcagtattg cggcagcaac aaaaacgata gattgcatta tttcttgcat
     6721 aaccgtcctt tatacagtaa ttcttgctct aatataatgc ctgtttttat ccgtataatc
     6781 agttctggca tgcaagccat tgacattgtc aataataatc aaaccatcat cttgtgcaga
     6841 aaattcttga atatcactcg cattttttat aacatttaca agataatcaa gtgcaagtac
     6901 catttccttt gatactttat ttctattttc ttcaatacct ttatagatac aatcacttct
     6961 aaatctaatc atttgagtat tgaccgataa gatattaccc catctcacac cttgtttttt
     7021 atcaaatgat gctggtgttt taaatggata taaattgccc gttaatgttt ttaagtgttt
     7081 tttaccggtt tctgttttag ataactgatt gacaatatct gatgaactta aaaataggga
     7141 attacctcca tcattggctg attttactac atacataacc aaataacttt ccgggttttc
     7201 actaaaagat gaatcactat gaagtggaca ttctccaaca tcttccgaga aagttatatc
     7261 a
//
LOCUS       DAWITQ010000100         7224 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.100, whole genome shotgun sequence.
ACCESSION   DAWITQ010000100 DAWITQ010000000
VERSION     DAWITQ010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7224)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7224)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7224
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.100"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(16..771)
                     /locus_tag="WIX18_001515"
     CDS             complement(16..771)
                     /locus_tag="WIX18_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HEZ5238608.1"
                     /translation="MKFARLLFLCAALAGTQAAAAEMVQIEGGSYRPLYLKKDTGLIK
                     VKPFKLDKYPVTNAEFAEFVNSHPKWQKGKVSSKQAEPAYLKHWMKNGSRSYAPKAGE
                     LKQPVTNVSWFAANAYCAAQGKRLPTIDEWEFAGLASATQKNGSNEPGYNRTILDWYA
                     DGGRKGLHDVGKGRPNYWGVYDMHGLIWEWTEDFNSSLLSSGNADAQMFCSGASVGSS
                     DSSNYAAFLRYGIRTSLQSKYVLHNLGFRCTSR"
     gene            complement(951..2126)
                     /gene="nirK"
                     /locus_tag="WIX18_001516"
     CDS             complement(951..2126)
                     /gene="nirK"
                     /locus_tag="WIX18_001516"
                     /EC_number="1.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase, copper-containing"
                     /protein_id="HEZ5238609.1"
                     /translation="MKRQTLAALIASVFALAACGEQAAKPAETPAATASAEAPAASNS
                     QAAAETPSSELPVIDAIVTHAPEVPPPTDRDHPAKVRVKMETVEKTMKMDDGVEYHYW
                     TFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGGGAAATFTAPGRTS
                     TFSFKALQAGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLPKVDKEFYIVQGDFYTK
                     GKKGAQGLQPFDMDKAIAEQPEYVVFNGHVGSIAGDNALKAKAGETIRMYVGNGGPNL
                     VSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDIPGSYTLVDHSIFR
                     AFNKGALGQLKVEGEENPEIMTQKLSDTAYAGNGAASAASAPAASAPAASASEKSVY"
     gene            2524..4779
                     /locus_tag="WIX18_001517"
     CDS             2524..4779
                     /locus_tag="WIX18_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric-oxide reductase large subunit"
                     /protein_id="HEZ5238610.1"
                     /translation="MGQYKKLWYLLFAVLAVCFTILGYMGSEVYKKAPPYPEQVVSAS
                     GKVLMTKDDILAGQSAWQTTGGMEVGSILGHGAYQAPDWTADWLHRELVAWLDLTAQE
                     TYGKKFDEVSPEEQAVLKTRLADEYRNQSRVKEDGSVVVSETRVKAIESILPYYHGVY
                     SDDPKFQTTREHFAMKNNTLPSQEAREKLFNFFFWTSWSASTNRPDENFTYTNNWPHE
                     PLINNVPTTENYMWSFTSVVLLLMGIGLLMWGYSFLTKHEEVEVPSEDPISKIQLTPS
                     QKALGKYVFLTVALFVVQVLLGGLTAHYTVEGQGFYGIDEALGFEMSDWFPYALTRTW
                     HIQSAIFWIATGFLTAGLFLAPIVNGGKDPKFQRAGVNFLYIALFIVVGGSYAGNFFA
                     LTHILPPEFNFWFGHQGYEYLDLGRFWQLLLMVGLLLWLFLMLRCTVSAFKEKGVDKN
                     LLAIFVASMVGVGVFYAPGLFYGEKSPIAVMEYWRWWVVHLWVEGFFEVFATAAFAFV
                     FYNMGFVRRSTATASTLAAAAIFMLGGVPGTLHHLYFSGSTSASMAIGACFSALEVVP
                     LVLLGREAYEHWSYQHLSDWAKRLRWPLMCFVAVAFWNMIGAGVFGFLINPPISLFYI
                     QGLNTSAVHAHAALFGVYGFLALGFVLLVARYLKPNVQFDDKLMTWGFWLLNGGLVGM
                     IAISLLPVGVIQAYASITHGLWYARSEEFLQMEILDTLRWVRTAADLIFIGGAICVAI
                     QATKIVFGRDK"
     gene            4958..5491
                     /locus_tag="WIX18_001518"
     CDS             4958..5491
                     /locus_tag="WIX18_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HEZ5238611.1"
                     /translation="MGIYDFQMKDAEGNAVDLSGYRGKVLLIVNTATRCGLTPQYEAL
                     QKLYAQYTAEGLEILDFPCNQFREQAPESSGEIAQVCMMKFGTKFKIFDKIEVNGANT
                     APLYAYLKSVKPQDKGNHLFKDFVLKLAALGEKRDEGDIKWNFTKFLVNRDGEVVERF
                     APSVTPEEIEADIRALL"
     gene            complement(5554..6738)
                     /locus_tag="WIX18_001519"
     CDS             complement(5554..6738)
                     /locus_tag="WIX18_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HEZ5238612.1"
                     /translation="MTEPTSRRRFLKTCTAAAGAGLLQACGTSATSVPPLPSSHSVVK
                     ARTVPLQTPRRQSSDGNLLRVVASSGFAEDTNRVNTALTRLYNAGFTVTNQQAGSRRF
                     QRFAGTDAQRVADFQEVASGRVATPKVLMGLRGGYGAARILPHIDFASLGARMREHGT
                     LFFGFSDVCAVQLALLAKGNMMSFAGPMAYSDFGKPAPGAFTMDAFIKGATQNRLTVD
                     VPYIQRADVETEGILWGGNLSVLASLAGTPYMPDIDGGILFLEDVGEQPYRIERMLNT
                     LYLSGILKKQRAIVFGNFRMEKIRDVYDPSYDFSAVANHVSRTAKIPVLTGFPFGHIA
                     DKITFPLGAHARIRMNGNSGYSVAFEGYPTLDASALTLDTLLPPPDLPIFPESGVADI
                     SE"
     gene            complement(6778..7182)
                     /locus_tag="WIX18_001520"
     CDS             complement(6778..7182)
                     /locus_tag="WIX18_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HEZ5238613.1"
                     /translation="MTAQPCPICTAQDEDILLQTPKLRVIAVHNDSGSPAFCRVIWRK
                     HIAEMTDLSAAERGELMEMVYKVEAAMRQVFQPAKINLASLGNVVPHLHWHIIARFEN
                     DASFPAPIWANPVRKHGMTLPQDWTEQLKKLL"
BASE COUNT         1691 a         1719 c         1957 g         1857 t
ORIGIN      
        1 ctataattga aggggttatc ggcttgtgca acggaagccc aagttgtgca agacgtattt
       61 ggattgtagg ctggtgcgga tgccgtagcg gaggaatgcg gcatagttgg acgagtcgct
      121 cgacccgaca gatgcgccgc tgcaaaacat ttgcgcatcg gcattgccgg aagaaagcag
      181 gctgctgttg aaatcttccg tccattccca aatcagaccg tgcatatcgt aaacgcccca
      241 gtagttcggg cggcctttgc cgacatcgtg caggccttta cgaccgccat ccgcatacca
      301 atcgagaata gtgcggttgt agccgggttc gtttgagccg tttttctgcg tggcggaagc
      361 aagtccggca aattcccatt cgtcaatggt cggcaggcgt ttgccttgtg cagcgcaata
      421 ggcgttggcg gcaaaccagg aaacattggt taccggttgt tttaattcgc ccgccttcgg
      481 cgcatagctg cggctgccgt ttttcatcca atgcttcagg taagcaggct ctgcctgttt
      541 ggaactgacc ttgccctttt gccatttggg gtgactgttg acaaattcgg caaactcggc
      601 attggtaacg ggatatttat ccagtttgaa cggtttgact ttaatcaggc cggtatcttt
      661 tttcagataa agcgggcggt agctgccgcc ttcgatttga accatttcgg cagccgccgc
      721 ttgggtgccg gcgagagccg cacagagaaa gagtaaccgg gcaaacttca tattatgcct
      781 cctgacaggc ggttaacatt gatttttcag acggcatttt aaacgagaac cgcgaatgcc
      841 gtctgaagaa tcaagcttcc aaagtaaaaa ggttgatgat taaaaaacca ctgccgtgcg
      901 taatgaagta cggcggcagt ggtttgttcc gctaatgacg gatatccgat ttagtaaacg
      961 cttttttcgg atgcagaggc tgccggagcg gaagctgcgg gagcggaagc tgcggaagcc
     1021 gcaccgttgc cggcgtaagc ggtatcactc agtttttgag tcataatttc agggttttcc
     1081 tcaccctcta ctttcaattg acccaacgcg cctttgttga atgcgcggaa gatagagtgg
     1141 tcgaccaagg tgtagctgcc tggaatgtcg actttgaatt cgacaatggc ggaaccgccg
     1201 gcaggaacaa ttgtactttg tacgttttcg ttaatcagtt taccaccttc aacatatact
     1261 ttgtcgaaga tttcgccgat aacgtggaaa gaagatacca agttaggacc accgttacca
     1321 acgtacatac gaatagtttc accagcttta gctttcagag cgttatcgcc ggcgatagag
     1381 cctacgtgac cgttgaatac aacgtattca ggttgttcag caatcgcttt atccatatcg
     1441 aaaggttgca ggccttgagc acctttttta cctttagtat agaagtcacc ttgtacgatg
     1501 tagaactctt tgtccacttt aggcagacct tctttaggtt caaccaagat caaaccgtac
     1561 ataccgttgg cgatgtgcat acctacagga gcaacggcac agtggtagat gtacaaacca
     1621 gcttgcagcg ctttgaagct gaatgtggaa gtacggcccg gagcggtaaa ggttgcagcc
     1681 gcgccgccgc cctgaccggt agccgcgtgg aagtcgacgt tatggggaac ggtagaagaa
     1741 ggattgttgg agaattccac ttcaaccgta tcgccttcgc gtacgcggat catgcggccc
     1801 ggaacatcgc cgtcaaatgt ccagtaatgg tattccacgc cgtcgtccat tttcatggtt
     1861 ttttcaacgg tttccatttt aacgcgtact ttagccggat ggtcgcgatc agttggaggt
     1921 ggaacttccg gagcgtgagt tacgatagca tcgattacag gcagttctga agaaggagtt
     1981 tctgcagcag cttgtgagtt ggaagcggca ggagcttcag cagaagcggt agcagctgga
     2041 gtttcagcag gtttagcagc ttgctcgccg catgcggcca gtgcaaatac agaagcgata
     2101 agtgcggcta aggtttggcg tttcatgttt aaagtttcct tatagtaaga aaagttaaga
     2161 atcctgatag gatggtttga aattttgtat gattatgtag gcgcttgttt ggtcatattt
     2221 tgatgtaaat caaattattc agggaatatg aatcttttac tacctaaata ctcctttaga
     2281 agtataaaaa aatacatcga aaagtttaat tttgtgtgaa aatgttagcg aaaatttaac
     2341 acaaatacga taaaggaggg tttgtataag aaaatgggaa tcaatatcat ataagttaat
     2401 ggttttaaag gaatattttt gacaaaatat ttctttactt gttaaaccgt gatacaatct
     2461 ttaacattca tatttgatga attaataccc aaccactttt accaaaatta aggagtactt
     2521 aaaatgggac agtacaagaa gctttggtac ttgctgtttg ccgttctggc ggtatgcttt
     2581 accattcttg gctatatggg cagcgaggtt tacaaaaaag ccccgcctta ccccgaacag
     2641 gtcgtttccg catccggcaa ggtcttgatg acgaaagacg atattttggc aggtcagtct
     2701 gcatggcaga ctaccggcgg tatggaggtc ggttcgattc tgggccacgg cgcatatcag
     2761 gctccggact ggacggcgga ctggctgcat cgtgagttgg ttgcctggtt ggatctgact
     2821 gcgcaagaaa cttacggtaa aaaatttgac gaagtttctc ctgaagaaca agctgttctg
     2881 aaaacacgtt tggctgacga ataccgcaac caaagccgtg ttaaggaaga tggttctgtt
     2941 gttgtcagcg aaacccgcgt gaaagccatc gaaagcatcc tgccttacta ccacggtgtg
     3001 tacagcgacg atcctaagtt ccaaaccact cgcgaacact ttgcaatgaa aaacaataca
     3061 ttgccaagcc aagaagcgcg tgaaaaactg ttcaacttct tcttctggac ttcttggtct
     3121 gcttcgacca accgtcctga cgagaatttt acttacacca acaactggcc gcacgaacct
     3181 ttgatcaaca acgtaccgac cactgaaaac tatatgtggt cattcaccag cgttgttctt
     3241 ctgctgatgg gcatcggttt gctgatgtgg ggttattcct tcctgaccaa acacgaagaa
     3301 gtggaagtgc cgtctgaaga cccgatttcc aaaatccaac tgaccccttc gcaaaaagca
     3361 ttgggcaaat acgtcttcct gacggtcgcc ctgtttgtgg tacaagtatt gctgggcggc
     3421 ctgaccgcac actacaccgt cgaaggccag ggtttctacg gtatcgacga ggcgttgggc
     3481 tttgaaatgt ccgactggtt cccctacgcc ctgacccgta cttggcacat ccaatccgct
     3541 atcttctgga ttgcaaccgg ctttttgacg gcaggtttgt tcctcgcgcc gattgtcaac
     3601 ggcggcaaag atcccaagtt ccaacgtgcc ggtgtgaact tcctctatat cgccctcttc
     3661 atcgtggtcg gcggttctta cgcgggcaac ttcttcgcgt tgacgcacat ccttcccccc
     3721 gaatttaatt tctggttcgg acaccaaggt tacgaatacc tcgatttggg tcgtttctgg
     3781 caactcctgc tgatggtcgg actgctgttg tggctgttcc tgatgttgcg ctgcacggtt
     3841 tccgccttca aagaaaaagg cgtggacaaa aacctgctgg caatctttgt cgcttctatg
     3901 gtcggtgtgg gcgtgttcta cgcaccggga ctgttctatg gcgaaaaatc cccgattgcc
     3961 gtaatggaat actggcgttg gtgggtggtt cacctgtggg tggaaggctt ctttgaagta
     4021 tttgccactg ccgccttcgc atttgtcttc tacaatatgg gctttgtccg ccgcagtacc
     4081 gccactgcct ccactttggc cgctgccgcc atctttatgt tgggcggcgt tccgggtacg
     4141 ctgcaccacc tgtacttctc cggctctacc tccgcctcta tggcaatcgg cgcctgcttc
     4201 tccgctttag aagtcgtgcc gctggtgttg ctgggtcgtg aagcatacga gcattggtct
     4261 taccaacacc tgtccgactg ggcgaaacgc ctgcgttggc cgctgatgtg cttcgttgca
     4321 gtcgccttct ggaatatgat cggtgccggc gtattcggct tcctgatcaa tccgccgatt
     4381 tccctgttct atatccaagg tttgaacact tctgccgttc acgcgcacgc cgccttgttc
     4441 ggtgtgtacg gtttcttggc attgggcttc gtattgctgg ttgcccgtta tttgaaaccg
     4501 aacgtgcagt ttgacgacaa actgatgact tggggcttct ggctgctgaa cggcggtttg
     4561 gtgggtatga ttgccatcag cctgttgccg gttggcgtga ttcaggcata cgcctccatc
     4621 acgcacggtc tgtggtatgc gcgtagcgaa gagttcctgc aaatggaaat cttggatact
     4681 ctgcgttggg ttcgtactgc tgctgacttg atcttcatcg gcggtgcaat ctgtgtcgcc
     4741 atccaagcca ctaaaatcgt attcggccgc gacaaataag ttttgcggta tgaaatgagc
     4801 aactgcaccc gttttcgggt gcagtttttt attgcggatt gggacgggaa tggaaaagga
     4861 tgtggatttt ttattttaat cggctataca attgctgctt tcatgccgtc tgaagcacgt
     4921 ttcagatggc atcggtttac atcagataag gataaaaatg ggtatttacg attttcaaat
     4981 gaaagatgca gaaggcaatg cggttgattt gtcaggctat cgcggcaagg ttctgctgat
     5041 tgtcaacacg gcaacgcgtt gcggtctgac cccgcaatac gaggctttgc agaagctgta
     5101 tgcacaatat accgcagaag gcttggagat tttggatttt ccgtgcaacc agttccgcga
     5161 acaggctccc gaaagcagcg gagaaattgc ccaagtgtgt atgatgaagt ttggcacgaa
     5221 gtttaagatt ttcgacaaaa tcgaagtcaa tggagcaaat accgcgccct tgtatgccta
     5281 cctgaaatcc gtcaaaccgc aagataaagg caatcatctg tttaaagatt tcgtgttgaa
     5341 gctcgcagct ttgggagaga agcgcgacga aggcgacatc aaatggaact ttaccaaatt
     5401 cctcgtcaac cgcgacggcg aagtggtcga gcgttttgcg cctagtgtta cgcccgaaga
     5461 aatcgaagcc gatattcggg cattgctgta atctgccgcc gtcttgggaa atgccgtctg
     5521 aaggcttcag acggcatttg tccgtttgcg ggtttattcc gaaatatcgg caacaccgct
     5581 ttcggggaag atgggcaaat ccggcggtgg gagcagggta tccaaagtca gggcggacgc
     5641 atcgagtgtg gggtagcctt caaacgcgac cgaataaccg ctgtttccgt tcatacggat
     5701 tcgggcgtgc gcgcccagag ggaaagtgat tttgtcggca atgtgcccga agggaaagcc
     5761 cgtcagcacg gggattttcg ccgtgcgcga aacatggttg gcaacggcgg aaaaatcata
     5821 agacggatca tagacatctc gaattttttc catacggaaa ttgccgaaca cgatggcgcg
     5881 ctgtttcttc aaaatacccg aaagatacag cgtattgagc atacgttcga tgcggtaggg
     5941 ctgttcgccg acatcttcga ggaacaaaat gccgccgtcg atgtcgggca tataaggcgt
     6001 gccggcgagc gaggcgagga cgcttaagtt gccgccccac aatatgcctt cggtttcgac
     6061 atcggcgcgt tggatataag gaacatcaac ggtcaggcgg ttttgggttg cacccttgat
     6121 aaaggcatcc atcgtaaacg caccgggggc gggtttgcca aaatcgctat aagccatcgg
     6181 gccggcaaaa ctcatcatat tgccttttgc caacaatgcc agctggacgg cgcatacgtc
     6241 gctgaatccg aaaaacagcg tgccgtgttc gcgcatcctt gcgccgagcg aagcaaaatc
     6301 gatatgcggc agaatccgcg ccgcaccgta accgccgcgc aagcccatca gcactttagg
     6361 cgtggcgacg cggccggaag cgacctcttg gaaatcggcg acacgttgtg cgtccgtacc
     6421 agcaaaccgt tggaagcggc ggctgcccgc ctgttggttg gttacggtaa aaccggcatt
     6481 gtaaaggcgg gttaaggctg tgttgacgcg gttggtgtct tcggcaaagc ctgacgaagc
     6541 gacaacgcgc agaaggttgc cgtccgaact ttgacggcgt ggcgtttgga gaggcacggt
     6601 tcgggctttc acaacagaat gggaagaggg aaggggcgga acggatgtgg cggatgtgcc
     6661 gcaagcctga agcagtcccg cgccggcggc ggcggtgcag gttttcagaa aacgacggcg
     6721 ggaggtcggt tcggtcataa tttccctttc atacggtttc agacggcatc ggcgggctta
     6781 aagcagcttt ttaagctgtt ccgtccaatc ttgcggcagg gtcataccgt gttttcggac
     6841 ggggtttgcc caaatcggcg cagggaagga cgcatcgttt tcaaagcggg cgataatatg
     6901 ccaatgcagg tgcggcacga cattgcccaa gctggcgagg ttaatcttgg caggttgaaa
     6961 cacttggcgc atagcggctt cgactttgta caccatttcc atcaattcgc cgcgttccgc
     7021 tgccgaaagg tcggtcattt cggcaatatg cttacgccaa atgacgcggc agaatgcagg
     7081 cgaaccgctg tcgttatgga cggcgatgac gcgcagcttg ggggtttgca gcaaaatatc
     7141 ttcatcttgt gccgtgcaga tggggcaggg ttgggcggtc atttttcctt attcctgaaa
     7201 gtgtttaaaa aacggtagga taat
//
LOCUS       DAWITQ010000101         7164 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.101, whole genome shotgun sequence.
ACCESSION   DAWITQ010000101 DAWITQ010000000
VERSION     DAWITQ010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7164)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7164)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7164
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.101"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(93..452)
                     /gene="rnpB"
                     /locus_tag="WIX18_001521"
     ncRNA           complement(93..452)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="WIX18_001521"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(531..1634)
                     /gene="prfB"
                     /locus_tag="WIX18_001522"
     CDS             complement(531..1634)
                     /gene="prfB"
                     /locus_tag="WIX18_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HEZ5238614.1"
                     /translation="MEAEVINQLNNTLNDLEKRSEDIRVYMDYQGKKDRLEEVVGLSE
                     DPELWNDPKRAQEIGKERKILEGIVLTLDNIATGIEDNRMLIEMTVEENDEEGFAAVQ
                     EDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAER
                     KGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTS
                     FASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQC
                     QNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR
                     IKDLRTGYEVGNTKAVLDGDLDGFIEASLKQGV"
     gene            complement(1737..2630)
                     /locus_tag="WIX18_001523"
     CDS             complement(1737..2630)
                     /locus_tag="WIX18_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEZ5238615.1"
                     /translation="MVTFSKIRPLLAIAAAALLAACGTAGNNAARKPVQTAKPAAVVG
                     LALGGGASKGFAHVGIIKVLKENGIPVKVVTGTSAGSIVGSLFASGMSPDRLELEAEI
                     LGKTDLVDLTLSTSGFIKGEKLQNYINRKVGGRRIQQFPIKFAAVATDFETGKAVAFN
                     QGNAGQAVRASAAIPNVFQPVIIGRHTYVDGGLSQPVPVSAARRQGANFVIAVDISAR
                     PGKNISQGFFSYFDQTLNVMSVSALQNELGQADVVIKPQVLDLGAVGGFDQKKRAIRL
                     GEEAARAALPEIKRKLAAYRY"
     gene            2972..3421
                     /locus_tag="WIX18_001524"
     CDS             2972..3421
                     /locus_tag="WIX18_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEZ5238616.1"
                     /translation="MKIGTTWQTASAMLVLRLFAAYEFLESGLQKWNGENWFSEINDQ
                     FPFPFNLLPDALNWNLAMYAELLLPVLLLLGLATRLSALGLMVVTAVAWAAVHAGSGY
                     NVCDNGYKMALIYIVVLIPLLFQGAGGWSLDTLLKKRFCPQCRLKQD"
     gene            3495..3803
                     /locus_tag="WIX18_001525"
     CDS             3495..3803
                     /locus_tag="WIX18_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238617.1"
                     /translation="MNKNIAAALAGALSLSLAAGAVAANKPASNATGVHKSAHGSCGA
                     SKSAEGSCGAAGSKAGEGKCGEGKCGATVKKTHKHTKASKAKAKSAEGKCGEGKCGSK
                     "
     gene            3919..4761
                     /locus_tag="WIX18_001526"
     CDS             3919..4761
                     /locus_tag="WIX18_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 family protein"
                     /protein_id="HEZ5238618.1"
                     /translation="MIQHAGLGYRRDLAEDFLSLSENSPICFIEAAPENWLKMGGWAR
                     KQFDRVAERLPLALHGLSMSLGGQAPLDTDLIDGIKEMMRRYDCTFFSDHLSYCHDGG
                     HLYDLLPLPFTEEMVHHTARRIREVQDRLGCRIAVENTSYYLHSPLAEMNEVEFLNAV
                     AREADCGIHLDVNNIYVNAVNHGLLSPEAFLKNVDADRVCYIHIAGHDVETPELLIDT
                     HGAAVLPTVWDLLELAYAKLPTIPPTLLERDFNFPPFAELEAEVAKIADYQTRAGKEC
                     RRAA"
     gene            4751..5497
                     /locus_tag="WIX18_001527"
     CDS             4751..5497
                     /locus_tag="WIX18_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2063 domain-containing protein"
                     /protein_id="HEZ5238619.1"
                     /translation="MQPETSAQYQHRFAQAIRGGEAADGLPQDRLNVYIRLIRNNIHS
                     FIDRCYTETRQYFDSEEWSRLKEGFVRDAHAQTPYFQEIPGEFLQYCQSLPLSDGILA
                     LMDFEYTQLLAEVAQIPDIPDIHYSNHSKYTPSPAAFIRQYRYDVTDDLQEAETALLI
                     WRNAEDDVMYQTLDGFDMMLLEIMGSSALSFDTLAQTLVEFMPEDDNWKNILLGKWSG
                     WTEQRIIIPSLSAISENMEGNSPGQNHLSA"
     gene            5519..6106
                     /locus_tag="WIX18_001528"
     CDS             5519..6106
                     /locus_tag="WIX18_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEZ5238620.1"
                     /translation="MPLPDLTDAELIESRKLLLHFARLQLPDHPDLAEDLVQETLLSA
                     YSAGDSFQGRALVNSWLFAILKNKIIDALRQIGRQRKVFTTLDDELLDEAFESHFSQN
                     GHWTQEGQPQHWNTPEKSLNNNEFQKILQSCLYNLPENTARVFTLKEILGFSSDEIQQ
                     MCGISTSNYHTIMHRARESLRQCLQIKWFNQENPK"
     gene            6112..6291
                     /locus_tag="WIX18_001529"
     CDS             6112..6291
                     /locus_tag="WIX18_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEZ5238621.1"
                     /translation="MKKCRDIALLLSKHQDRETTPGEKISIYTHLLFCPYCREYKRQL
                     QTIKRSLAKTTRTSK"
     gene            6532..6972
                     /locus_tag="WIX18_001530"
     CDS             6532..6972
                     /locus_tag="WIX18_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238622.1"
                     /translation="MIKETLMRPIFLSFVLLPILITACSTPDKSARWENIGTISNGNI
                     HTYINKDSVRKNGNLMIFQDKKVVTNLKQERFANTPAYKTAIAEWEIHCNNKTYRLSS
                     LQLFDTKNTEISTQSYTASSLRPMSILSGTLTEKQYETVCGKKL"
BASE COUNT         1827 a         1904 c         1636 g         1797 t
ORIGIN      
        1 ggtttttgtt aatccactat aaaaacacaa cctaaataaa aatgccgtct gaaccatatt
       61 tcaggtttca gacggcattt gcgtgtcgga tgcacaccgg acgggcggta agccgggttc
      121 tgtctcggac agtcattcct ctaggcatac cgttaccggt atgctcaagc aacctacccg
      181 aacgctcggc gggcagcgtc attgcgttct gtttggtctt gctccgaatg gggtttggcc
      241 tgccgcatat tgttaccaaa tgcgcggtgc gcccttaccg caccttttca cccttgcctg
      301 tgctgccaaa gcagccatcg gcggttttgc tttctgttcc actttccgtc gcgttaccgc
      361 gcccggccgt taaccggcat tctaccctgc ggagcccgga ctttcctccc cgtatgcctt
      421 acgcgatacg cggcgactgt ctgcccgtcc cgtgtgcggc gcggattata acacgaaacg
      481 caaaaatgcc gtctgaaacg gtacaggttt cagacggcat acggttcaaa ctacacgccc
      541 tgtttcaggc tggcttcgat aaagccgtcc aaatcgccat ccaatacggc tttggtgttg
      601 ccgacttcgt agcctgtacg caagtctttg atacgtgagg aatccaaaac atacgaacgg
      661 atttggctgc cccaacctac atcggattta ccttcttcca acgcctgttt ctcttcgttg
      721 cgtttgcgca tttccaattc atacagtttg gatttcaaca tttccatcgc ggccgctttg
      781 ttggcgtgtt gcgaacggtc gttttgacat tgcaccacaa tccccgtcgg ctcgtgggta
      841 atacgcacgg cggagtcggt tttgttgatg tgctgaccgc ccgcgcccga tgcgcgatag
      901 gtgtcgatac gcaaatcggc ggggttgatt tcgatttcaa tggaatcatc gatttcaggg
      961 taaacgaaca cggaggcaaa cgaagtatgg cgtttgttgt tcgagtcaaa cggtgaatag
     1021 cgcaccaagc ggtgaacgcc ggtttcggta cgcagcaaac cataggcgta ttcgccttcc
     1081 actcggatag tcgcgcggtt gatgcccgcg atttcgccgt cgtcttcttc gaggatttcg
     1141 attttgaagc ctttgcgctc ggcgtagcgg ctgtacatac ggaacagcat acccgcccag
     1201 tcttccgctt ccgtaccgcc cgcgcctgcg gtgatgtcga taaagcagtt gttcgggtcg
     1261 gcgggctggt tgaacatccg tttgaactcc aaatccgcca tctgtttttc cagccccgcc
     1321 acatcttcct gcacggcggc aaaaccttct tcgtcgtttt cttcgacggt catttcaatc
     1381 agcatgcggt tgtcttcgat gcccgtcgcg atgttgtcga gcgtcaacac gatgccttcg
     1441 aggattttgc gctctttgcc gatttcttgg gcgcgtttcg ggtcgttcca aagttcgggg
     1501 tcttcggaaa gaccgacaac ttcttccaat cggtctttct tgccctgata atccatataa
     1561 acgcggatgt cttcgctgcg cttttccaaa tcattcaggg tattgttgag ctggttgatt
     1621 acttcggctt ccatgattct tttgttcttt caaaatttta ggggcgtatt gtacgggatt
     1681 cgggtatttt tttctatgga taaagccttc tggaaacacg ttcggacggc atagcgtcaa
     1741 taacggtatg ccgccagttt gcgtttgatt tcaggcaatg cggcacgtgc tgcctcctca
     1801 cccaaccgga tggcgcgttt tttctgatcg aatccgccga ctgcacccaa atccaaaacc
     1861 tgcggtttga taaccacatc cgcctgcccc aactcatttt gcaacgcgga aacgctcatt
     1921 acgttcagcg tctgatcgaa ataagagaag aaaccttggc tgatgttttt gcccggacgg
     1981 gcggaaatat cgacggcaat cacgaaattc gccccctgcc gccgggcggc actgacgggc
     2041 acgggctgcg acagaccgcc gtcaacatat gtatgcctgc cgatgataac gggttggaac
     2101 acattgggaa tggcggcgga agcgcgcaca gcctgcccgg cattcccttg attgaaagcg
     2161 acggccttgc cggtttcaaa atcagtagca acagcggcaa atttgatggg aaactgctga
     2221 atccgcctgc cgccgacttt tcggttgatg taattttgca gcttttcgcc tttgataaaa
     2281 ccactggtgg acaaggttaa atcgactaaa tcggttttgc ctaaaatttc ggcttccaat
     2341 tcgaggcggt cgggcgacat acccgatgca aaaaggctgc cgactatcga acctgccgat
     2401 gtgccggtaa ccaccttcac aggaatacca ttttctttca aaaccttaat aatgcctaca
     2461 tgggcaaatc ctttagatgc gccgccaccg agtgccaaac cgaccactgc ggcgggtttg
     2521 gcggtttgca ccggcttgcg ggcagcatta tttcccgccg tgccgcaggc ggcaagcaac
     2581 gcggcggcgg cgattgccaa aagcggtctg atttttgaaa acgttaccat attttccatt
     2641 cctttatata tcgcaccccg tcaaaaagag ggattgcttt tcttaacaac cccctttgac
     2701 agccaagcaa atgggggctt tgttaagtca tcatcaaaat taatatttct ttttttcctt
     2761 tacggaaatt atatttgaag gcatactatc caaggcggga attatctcac aacaccgccg
     2821 ttatccaaat atcccgcctt tttcccttcc tttccatcaa aatactttct ttttatattc
     2881 attaacttgt taaatcattg gctgccgggt gtcagttttt ccgacaaaat ccgtctaatg
     2941 gggtatcaac agaaccaaaa caggaacact tatgaaaatc ggaacaactt ggcagacggc
     3001 atccgctatg ctggttttgc gtctgtttgc cgcatatgaa tttttggaat cgggtttgca
     3061 aaaatggaac ggggagaatt ggttttctga aatcaacgat caattcccat tcccgttcaa
     3121 cttgctgccg gacgcgttaa actggaatct cgccatgtat gcggagcttt tgctgcccgt
     3181 actgttgctt ttgggtttgg caacgcgtct gtcggcatta gggctgatgg tcgttaccgc
     3241 cgtcgcttgg gctgcggttc acgccggttc gggttacaat gtctgcgaca acggttataa
     3301 aatggcttta atttatatcg tggtattaat cccgctgctt ttccagggtg cgggcggatg
     3361 gtcgctggat acgctgctga aaaaacggtt ttgcccccaa tgccgtctga agcaagattg
     3421 attcagtcgt ggaatctgac tttaaacatt ccaaccttat ctcgttaact tgatattctg
     3481 aaaaggaaat agaaatgaac aaaaacattg ctgccgcact cgccggtgct ttatccctgt
     3541 ctttggccgc cggtgcagtt gctgccaaca aaccggcaag caacgcaaca ggcgttcata
     3601 aatccgccca tggctcttgc ggcgcgtcca aatctgccga aggttcgtgc ggcgcggctg
     3661 gttctaaagc aggcgaaggc aaatgcggcg agggcaaatg cggtgcgacc gtaaaaaaaa
     3721 cccacaaaca caccaaagca tctaaagcca aggccaaatc tgccgaaggc aaatgcggcg
     3781 aaggcaaatg cggttctaaa taatcccacc ccttcaaacc aagccgcgtt tttcagtaaa
     3841 atgcggcttt tttaacggca aacaaagatt ttttaacaag cacatcattc ttttgtgcca
     3901 tccgaaccgg gtaaaaatat gattcaacac gcaggcttgg gctaccgccg cgacttggcg
     3961 gaagactttc tctcgctttc cgaaaacagc ccgatatgct ttatcgaagc cgcaccggaa
     4021 aactggctga aaatgggcgg ctgggcgcgc aaacagtttg accgtgtggc ggaacggctg
     4081 ccgctggcgt tgcacggatt gtctatgtcg ctgggcgggc aagcaccgct ggatactgat
     4141 ttgatagacg gcatcaaaga aatgatgcgc cgttacgatt gcacgttttt ctccgaccat
     4201 ttgagctact gccacgacgg cggtcatctt tacgatttgt tgccgctgcc cttcaccgag
     4261 gaaatggtgc atcatacggc gcggcgtatc cgtgaagtgc aagaccgttt gggctgccgc
     4321 atcgccgtgg aaaacacgtc ctactatctg cattccccgc ttgccgagat gaacgaggtc
     4381 gagttcctca acgccgtcgc acgtgaggcc gattgcggca ttcatctgga tgtgaacaat
     4441 atctacgtca acgccgtcaa tcacggcctg ttgtcgccgg aggctttttt gaaaaacgtt
     4501 gacgcagatc gcgtgtgcta tatccatatt gccggacatg acgtggaaac gccggaattg
     4561 ttgattgata cacatggcgc ggcagttttg ccgactgttt gggacttgct cgaacttgcc
     4621 tatgccaagc tgccgacgat tccgcccacc ctgttggaac gcgattttaa tttcccgcct
     4681 tttgccgaac tcgaagccga agtcgccaaa atcgccgatt atcaaacgcg tgccggaaag
     4741 gaatgccgcc gtgcagcctg aaacctccgc ccaataccag caccgtttcg cccaagccat
     4801 acgcgggggc gaagccgcag acggtctgcc gcaagaccga ctgaacgtct atatccgcct
     4861 gatacgcaac aatatccaca gctttatcga ccgctgctat accgaaacgc ggcaatactt
     4921 tgacagcgaa gaatggagcc gtctgaaaga aggtttcgtc cgcgacgcgc acgcccaaac
     4981 gccctatttt caagaaatcc ccggcgagtt cctacaatat tgccaaagcc tgccgctttc
     5041 agacggcatt ttggcactga tggattttga atatacccaa ttactggcag aagttgcaca
     5101 aattccggat attcccgaca ttcattattc aaatcacagc aaatacacgc cctcccctgc
     5161 ggcctttatc cggcaatatc gatatgatgt taccgatgat ttgcaggaag cggaaacagc
     5221 cttgttaata tggcgaaacg ccgaagatga tgtgatgtac caaacattgg acggcttcga
     5281 tatgatgctg ctggagataa tgggttcctc cgcgctttcg tttgacaccc tcgcccaaac
     5341 ccttgtcgaa tttatgcctg aggacgataa ttggaaaaat attttgcttg ggaaatggtc
     5401 aggctggact gaacaaagga ttatcatccc ctccttgtcc gccatatccg aaaatatgga
     5461 aggcaattcc ccgggccaaa accatctatc cgcataaaat taccttgttc ccgatactat
     5521 gccgctaccc gacctgaccg atgccgaatt aatagagtcg cgtaaactgc ttctgcattt
     5581 tgcgcggctt cagttgcccg accaccctga tttggctgaa gatttagtgc aggaaacatt
     5641 gctgtccgca tacagcgcag gcgacagttt tcaaggcagg gcacttgtca acagctggct
     5701 ttttgccata ttgaaaaaca aaattattga cgcattacgt caaatcggaa ggcagaggaa
     5761 agtctttacc acactggatg acgagctact ggatgaagca tttgaaagcc atttttccca
     5821 aaacgggcat tggacgcagg aagggcagcc gcaacattgg aacactccgg aaaaatcatt
     5881 aaacaacaac gaattccaaa aaattctgca aagctgccta tacaacctgc ctgaaaacac
     5941 cgcacgggta tttaccctga aggaaatact cggtttttca tccgacgaaa tacaacaaat
     6001 gtgcggtatc agcacgtcca actaccacac cattatgcac cgcgcccgag aatcattgcg
     6061 ccaatgcctg caaatcaaat ggttcaacca agaaaacccg aagtaaacgt tatgaaaaaa
     6121 tgccgcgata tcgccctgct tctttccaaa catcaggacc gggaaaccac cccgggcgag
     6181 aagatttcca tatacacaca cctgctgttc tgtccgtatt gccgtgaata taaaagacaa
     6241 cttcaaacca tcaaaagatc actggcaaaa acaaccagaa cttcaaaata aatgccgtct
     6301 gaaaaggctt cagacggcat aagctgacgg aaacaaatca aaccgattta ctgttatctg
     6361 cagttcatcc ataatacaca cttcaaaagc agcatatttc cccatacgga atgtataaat
     6421 acgcaaaata cgaaggctgc atcaatttgc catatttgct ttatttgcct tatttcacag
     6481 acgacactcc ccctcccgcc caacccgttc tttctgaatg agcagatttc aatgattaag
     6541 gaaaccctaa tgcgcccaat cttcctatct ttcgttttac tccctatttt gataaccgcc
     6601 tgcagcacac cggacaagtc tgcccgatgg gaaaatatcg gcacaatctc aaacggcaat
     6661 attcatacat atatcaacaa agacagcgtg agaaaaaacg gaaatctgat gattttccaa
     6721 gataaaaaag ttgtgaccaa tctaaaacaa gaacgttttg ccaacacccc cgcatacaag
     6781 actgccattg ccgagtggga aatccactgc aacaacaaaa cataccgctt aagttcgcta
     6841 cagttgtttg atacaaaaaa cacggaaatt tccacacaaa gctacacagc ctcttccctc
     6901 cgcccgatga gcatcctgtc cggaacatta actgaaaaac aatatgaaac cgtatgcggg
     6961 aaaaaactct gattacaact tatgcacaaa cttatccata aaccttatta taaaaatgcc
     7021 gtctgaaata ctgaaatatc agcatttcgg acggcatttt gccatttccc cgaaaagtta
     7081 cccccaaagt tatccacatt attttttaaa ccagcttcca tccgaaatat agtggattaa
     7141 caaaaatcaa gacaaggcga cgaa
//
LOCUS       DAWITQ010000102         7164 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.102, whole genome shotgun sequence.
ACCESSION   DAWITQ010000102 DAWITQ010000000
VERSION     DAWITQ010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7164)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7164)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7164
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.102"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            169..1107
                     /locus_tag="WIX18_001531"
     CDS             169..1107
                     /locus_tag="WIX18_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEZ5238623.1"
                     /translation="MSIHTLKRLPSSLLLGLCLSLPSAHLFADNDILGQFLEQNMLTS
                     SDPIEIFAESTIHPTNTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISK
                     LMSAMVVLDANLDMNETVTITPDEIDRIKGTGSRLAIGTALTRKELLHLSLMSSENRA
                     THALGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGLNFQNVSTAKDLSLMVNAAA
                     QYPQIRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKA
                     NIQNQPVTIVLLNSPTSATRVNDARKIESWMLQQRS"
     gene            1236..1529
                     /gene="hfq"
                     /locus_tag="WIX18_001532"
     CDS             1236..1529
                     /gene="hfq"
                     /locus_tag="WIX18_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HEZ5238624.1"
                     /translation="MTAKGQMLQDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYV
                     VLLRNTSVTQMVYKHAISTIVPARSVNLQHENRPQAAPASTLVQVETVQQPAE"
     gene            1613..2179
                     /locus_tag="WIX18_001533"
     CDS             1613..2179
                     /locus_tag="WIX18_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ5238625.1"
                     /translation="MLLKNILPFAHCLLRQALPEGGNALDGTAGNGHDTLFLAQTAGI
                     RGKVWAFDIQPQALNNTRCRLQEAGYSNVRFILDGHENLKQYIPKPLDAAIFNFGWLP
                     GGDKSLTTRTETSIAALSATLSLLKENGMLIAVLYPGHENGKQEAEAVGQWAKNLPQE
                     QFAVLRYGFTNRKNSPPYLLAFEKLRQK"
     gene            2233..2607
                     /locus_tag="WIX18_001534"
     CDS             2233..2607
                     /locus_tag="WIX18_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB2 family protein"
                     /protein_id="HEZ5238626.1"
                     /translation="MQYLFVKYSHQIFVTITILVFNIRFFLLWKNPEKPLAGFWKALP
                     HLNDTMLLFTGLWLMKITHFSPFNAPWLGTKILLLLAYIALGMMMMRARPRSTKFYTV
                     YLLAMCCVACIVYLAKTKVLPF"
     gene            2617..3111
                     /gene="folK"
                     /locus_tag="WIX18_001535"
     CDS             2617..3111
                     /gene="folK"
                     /locus_tag="WIX18_001535"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HEZ5238627.1"
                     /translation="MNNRHFAVIALGSNLENPAQQVRAALDTLSSHPDIRLKQASSLY
                     ITAPVGYDNQPDFVNAVCTVSTTLDGIALLAELNRIEADFGRERSFRNAPRTLDLDII
                     DFDGISSDDTRLTLPHPRAHERSFVIRPLAEILPDFVLGKHGKVAELSKRLGNQGIRL
                     LPDR"
     gene            complement(3239..3718)
                     /locus_tag="WIX18_001536"
     CDS             complement(3239..3718)
                     /locus_tag="WIX18_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEZ5238628.1"
                     /translation="MPESIFKQISLDILKLHRDSVYSLLATSGCNCQVHEAAYVNIDG
                     KYYIALSCEPEVGEVKTGILLIEDESRNLRLSWVGSARELDRKDSVYKRALSALSRKL
                     GRCKDRLHTAVQPFLLELVPEKGRFSVGDEEVWISRNDLVRALYPVGYSMRQAVLQI"
     gene            complement(3938..4675)
                     /gene="ubiE"
                     /locus_tag="WIX18_001537"
     CDS             complement(3938..4675)
                     /gene="ubiE"
                     /locus_tag="WIX18_001537"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HEZ5238629.1"
                     /translation="MGGQKTHFGFSTVNEDEKAGKVAEVFHSVAKNYDIMNDVMSAGL
                     HRVWKHFTINTAHLKKGDKVLDIAGGTGDLSRGWAKRVGKEGEVWLTDINSSMLTVGR
                     DRLLNEGMILPVSLADAEKLPFPDNYFNLVSVAFGLRNMTHKDAALKEMYRVLKPGGT
                     LLVLEFSKIYKPLEGAYDFYSFKLLPVMGKLIAKDAESYQYLAESIRMHPDQETLKQM
                     MLDAGFDSVDYHNMSAGIVALHKGVKF"
     gene            complement(4718..5086)
                     /locus_tag="WIX18_001538"
     CDS             complement(4718..5086)
                     /locus_tag="WIX18_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HEZ5238630.1"
                     /translation="MNNIPVEIRLLKNRTVLVLTYGDEPKNLPAEFLRVYSPSAEVRG
                     HGVGQDVLQTGKADVQIADLQPVGQYALKISFSDGHDSGLYDWAYLHRLAYGYDAMWQ
                     EYLDKLAAAGASRFEKQSDC"
     gene            5206..6825
                     /gene="mnmC"
                     /locus_tag="WIX18_001539"
     CDS             5206..6825
                     /gene="mnmC"
                     /locus_tag="WIX18_001539"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HEZ5238631.1"
                     /translation="MDNLVWDGVPDIRTLDQTIRKHAHPLNLIVCLPDNQIPDFQTAQ
                     DASDAECRLKHRLDQATQCLQFDSINLIEHILPDVRFWLVPPSRTRRLHEHFHHISWQ
                     TEAIPQTESKPDKPWFALPQTSERQKPEHILVIGAGISGAATAHALASHGISVTVLEA
                     RKAAQAASGNRQGLLYAKISPHDTEQTELLLAGYGYTKRLLGHILPESETWGGNGIIH
                     LNYSRTEQQRNHELGLQKHHNHLYRSITQAEAEKIAGIPLNTPYAEPLCGLFWQHGVW
                     LNLPAFVRALLRHPLIGLHEDTPLTGISHDGEKWIASTPNGIFSATHIVYCTGAHSPC
                     LPEINLAALPLRQIRGQTGLTPSTPFSEQLRCAVSGESYISPSWHGLHCYGASFIPNS
                     SHTGWNEAEEASNRQALAHLNPALAESLFAANPNPQKYQGHAAIRCDSPDHLPLVGAL
                     GDIAAMRQTYTKLALDKNYRIDTPCPYLPNAYVNTAHGTRGLATAPICAAAVAAEILG
                     LPHPLSKRLRHALHPNRTIIRAIVRRKDLTP"
BASE COUNT         1907 a         2236 c         1451 g         1570 t
ORIGIN      
        1 tgttaatcca ctatatgttc cgatttaaaa acagaatgtt ataaaaccca atccccaaaa
       61 cacaacaaga ccgcccgcct acgggcagtc tcctgtcaga cgacatactt tacagatggc
      121 tgttttttca acaaaataac gccaatactc aaaaatatgg aatcaaaaat gtccatccat
      181 actctgaaac gcctgccctc atcgctgctg ctcggtctct gcctttccct gccgtcagcc
      241 cacctttttg ccgacaacga cattttaggg caatttttag aacagaacat gcttacctcc
      301 tccgatccga tagaaatatt cgccgaaagc acgatacacc ccaccaacac ccaagccatt
      361 acaggcggtc tgattctctc ctcacagtct gccctggtcg tcaacaacaa aaccggacag
      421 atactgtatc agaaaaacgc cgacaggatt atgcccatcg cctccatttc caaactgatg
      481 agcgcgatgg tcgttttgga tgcaaacttg gacatgaacg aaaccgttac cattacgccc
      541 gacgaaatcg accgcatcaa agggaccggc agccgtcttg ccataggtac ggcacttaca
      601 cgcaaagaac tgctgcacct gagcctgatg agcagcgaaa accgcgccac ccatgcattg
      661 ggcagaacct accccggcgg catgggcgca tttgtcgccg ccatgaaccg caaagcccaa
      721 agcctcggta tgtacggcag ccgcttttac gaaccgaccg gactcaactt ccaaaacgtt
      781 tctaccgcca aagacctgag ccttatggtc aacgccgccg cccaatatcc gcaaatccgc
      841 accaactcga cttccaacta cgcctcggta cagaccaaaa acgggcagca gaactacaaa
      901 aactccaatg ccctggtcag agaaggcatg tggaacatcg aattgcagaa aaccggctac
      961 atacgcgaag caggcaggtc tatggttgtc aaagccaaca ttcaaaatca acccgttacc
     1021 atcgtattgc tgaactcgcc cacatccgcc acacgcgtca acgacgcccg caaaatcgaa
     1081 tcgtggatgc tgcagcaacg ctcctgacat acaaatgccc ggcggaaaac cgcccaaaca
     1141 caaaaaaaat tggtaatttt tcctattcaa ggctacaatt cgacacgcac agggcgtctg
     1201 cccgatttca caatcataat aacggagtta aaaatatgac agctaaagga caaatgttgc
     1261 aagatccctt cctgaacgcc ctgcgtaaag agcacgttcc ggtttcgatt tacctggtca
     1321 acggcatcaa actgcaaggt caggttgaat ctttcgacca atacgtcgtt cttctgagaa
     1381 acacttccgt aacccaaatg gtttacaaac acgccatttc caccatcgta ccggctcgct
     1441 ccgtcaacct ccaacacgaa aacagacccc aagccgcacc ggcttcgacc cttgtccaag
     1501 tggaaaccgt ccagcagcct gccgaataat ccgcgcgaag catgacgtgt catatctttc
     1561 aataccttac cgacatcggt aaggtatttt tattttcaga cagcatttaa aaatgttatt
     1621 gaaaaacatc cttccattcg cccattgcct tttgcggcag gcacttcccg aaggcggcaa
     1681 tgcgctggac ggcaccgccg gcaacggaca cgacaccctt ttcctcgcac aaaccgcagg
     1741 catccggggg aaagtgtggg cattcgacat ccagccgcaa gccctgaaca acacccgatg
     1801 ccgtctgcag gaagcaggtt acagcaatgt acggttcatc ttggacggac atgaaaacct
     1861 gaagcaatat attccaaagc cgctggatgc agccattttc aatttcggct ggctgcccgg
     1921 cggggacaaa agccttacca cccgcacgga aaccagcatt gccgcccttt ctgccacctt
     1981 atccctactg aaagaaaacg gtatgcttat tgccgtcctc tatccgggac acgaaaacgg
     2041 caaacaggag gcagaagccg tcggacaatg ggcaaaaaac ctgcctcaag aacagtttgc
     2101 cgttttacgt tacggcttta ccaaccggaa aaacagccca ccctatctgt tggcatttga
     2161 aaaactgcgt caaaaataac tgtttgcggt aaaataagcc gattccaacc cttattttga
     2221 taagagccga ccatgcagta tctgtttgtc aaatacagcc accaaatctt cgttaccatc
     2281 accattttgg tattcaacat ccgttttttc ctactttgga aaaatccaga aaagcccttg
     2341 gcgggctttt ggaaggcact gccacacctt aacgacacca tgctgctgtt tacgggattg
     2401 tggctgatga aaattaccca tttctccccg ttcaacgcgc cttggctcgg tacaaaaatc
     2461 ctgcttctgc tcgcctatat cgcattgggt atgatgatga tgcgcgcccg tccgcgttcg
     2521 accaagttct acaccgttta cctgctcgcc atgtgttgcg tcgcctgcat cgtttacctt
     2581 gccaaaacca aagtcctgcc tttctgaaac accgttatga acaacagaca ttttgccgtc
     2641 atcgccctgg gcagtaatct tgaaaaccct gcccaacagg tacgcgccgc attggacacg
     2701 ctgtcgtccc atcctgacat ccgtcttaaa caggcttcct cactgtatat aaccgcgccc
     2761 gtcggttacg acaatcagcc cgattttgtc aatgccgtct gcaccgtttc caccactctg
     2821 gacggcattg ccctgcttgc cgaactcaac cgtatcgagg ctgatttcgg acgcgaacgc
     2881 agcttccgca acgcgccgcg cacattggat ttggacatta tcgactttga cggcatctcc
     2941 agcgacgaca cccgactcac cctgccgcat ccgcgcgcgc acgaacgcag tttcgtcatc
     3001 cgccctttgg cagaaatcct ccctgatttt gttttaggaa aacacggaaa ggttgccgaa
     3061 ttgtcaaaac ggctgggcaa tcaaggtatc cgtcttttac ccgacaggta attccgcacg
     3121 cggatgccgt ctgaatgccg gtttcagacg gcatttttac cctgccgcca atctgtacgc
     3181 aaaaaaaatc gccccttgaa aaaggggcgc aaaaggaaca caaaccacta ccaaaacttt
     3241 aaatctgcaa cactgcctgc cgcatactgt atccgacagg atataaagcc ctcactaaat
     3301 cgtttcgaga aatccaaact tcttcatcgc cgacagaaaa tctgcctttc tccggcacca
     3361 gctccaacaa aaacggttga accgccgtat gcagcctgtc cttacaccgc cccagctttc
     3421 tggacaacgc ggacaaggca cgcttataga cactatcctt gcggtcaagt tcccgcgcac
     3481 tgccgaccca gctcaaacga aggttgcggc tttcatcctc aatcagcaaa atgcctgttt
     3541 tgacttcccc cacctcgggc tcacatgaaa gcgcaatata atatttgccg tcgatgttga
     3601 catacgccgc ttcatgcacc tgacagttgc agccggaagt ggcaagcagc gaataaacag
     3661 agtcccgatg cagtttcaaa atatcaaggg aaatctgttt gaaaatactt tccggcattt
     3721 ttccctcctt tcgtctgctg cgttgtttac tggattgact gcattataca gacatctccc
     3781 aatcttgcaa atgataattg ttcctatttt ttaaaaaatt tataaattat tgatggatat
     3841 gtgaattaat tttaagattt aaaatctctt tctcaaaaaa acacaaaaat gccgtctgaa
     3901 acgtgttcag acggcattgg ctgcacagcc agtccgttta aaatttcacg cccttatgca
     3961 gcgcgacgat gcccgcactc atattgtgat aatccacgct gtcaaagccc gcatccagca
     4021 tcatctgttt caaagtttcc tgatcggggt gcatacggat ggattcggcg agatattgat
     4081 aactctccgc atctttggca atcagtttgc ccatgaccgg cagcagcttg aacgaataga
     4141 aatcatacgc gccttccaaa ggtttgtaga ttttggaaaa ctccaatacc agcaatgtcc
     4201 cgccgggttt caaaacacgg tacatctctt tcagcgcggc atctttatgc gtcatattcc
     4261 gcaaaccgaa cgccacggaa accaagttga aataattgtc agggaaaggc agtttttccg
     4321 catcggcaag cgacacgggc aaaatcatgc cttcgttcaa aagacggtcg cgcccgacgg
     4381 tcagcataga ggaattaata tcggtcagcc aaacctcgcc ttccttgccg acccgtttcg
     4441 cccaaccgcg cgacaaatcg cccgtaccgc cggcaatgtc caacacttta tcgccttttt
     4501 tcaggtgcgc cgtgttgatg gtgaaatgct tccacaccct gtgcagccct gccgacatca
     4561 catcgttcat aatgtcgtag tttttggcga cggagtggaa cacttccgcc acttttccgg
     4621 ctttctcatc ttcgttgacc gtactgaatc cgaaatgcgt tttctgtccg cccatattct
     4681 aaccacctcc ctgatgccgc cctacggcat cccaaactta acaatctgat tgcttttcaa
     4741 aacgggaagc acccgccgcc gccaatttgt ccaaatattc ctgccacatc gcatcgtatc
     4801 cgtatgccag tctgtgcaga tacgcccaat cgtaaagacc gctgtcgtgc ccgtctgaaa
     4861 aactgatttt cagcgcgtac tgtccgacag gctgcaaatc cgcgatttgg acatccgcct
     4921 tgccggtctg caaaacatcc tgtcccacgc cgtgtccgcg cacttccgca ctcggcgaat
     4981 agacgcgtaa aaattcggca ggcagatttt taggttcgtc cccataagtc aaaaccaaca
     5041 cggtacggtt tttcaacaaa cggatttcaa caggaatatt attcaaaaaa cacctcggtt
     5101 cggcatacaa tatccggcag gcgcaggcgt gccttcaaac ggcgcgtatt ttaacagctt
     5161 tatcccgata ccgatattca aacccacact ttaaacggca ttgatatgga caatctcgta
     5221 tgggacggcg ttcccgacat ccgcacactc gaccaaacca tccgcaaaca cgcacacccg
     5281 ctcaacctga ttgtctgcct ccccgataat cagattcccg attttcaaac cgcacaagat
     5341 gcttcggacg cggaatgccg tctgaagcac cgtttggatc aggcaacgca gtgcctccag
     5401 ttcgacagca tcaacctcat cgaacacatc ctgcccgatg tccgcttctg gctggttccc
     5461 ccttcacgca cccgccgcct gcacgaacac ttccaccaca tttcctggca gaccgaagcc
     5521 atcccgcaaa ccgaaagcaa acccgacaaa ccctggtttg cacttccaca aacatccgaa
     5581 cggcaaaaac cggaacacat cctcgttatc ggcgcgggca tatccggcgc ggcaaccgcc
     5641 cacgccttag catcacacgg catttccgtt accgtattgg aagcccgaaa agccgcccaa
     5701 gccgccagcg gcaaccgcca agggctgctc tacgccaaaa tctcgccgca cgacaccgaa
     5761 caaaccgaac tgctgcttgc cggctacggc tacaccaaac gcctgctcgg acacatcctg
     5821 cccgaatccg aaacctgggg cggcaacggc atcatccacc tcaattacag ccgcaccgaa
     5881 caacaacgca atcacgaatt gggtttgcaa aaacaccata accacctcta ccgcagcatc
     5941 acgcaggcag aagccgaaaa aatcgccggt atcccgctga acacgcccta cgccgaacca
     6001 ttatgcggac tgttttggca gcacggcgta tggctcaatc tacccgcatt cgtccgcgcc
     6061 ctcctccgcc atccgctgat tggactacac gaagacacac cgttaaccgg tatttcccac
     6121 gacggagaaa agtggattgc aagcacgcca aacggcatct tttctgccac acacatcgtc
     6181 tactgcaccg gcgcgcacag cccctgcctg cccgaaatca acctcgccgc cctgcccctc
     6241 aggcaaatac gcggacaaac cggcctcaca ccgtccaccc cgttttccga acaactgcgt
     6301 tgcgccgttt caggcgaaag ctacatcagc ccgtcgtggc acggactgca ctgctacggc
     6361 gcgagtttta ttcccaacag cagccatacc ggatggaacg aagccgaaga agcctcaaac
     6421 cgccaagcat tggcacacct taaccccgcc cttgccgaat cattgtttgc cgccaaccca
     6481 aacccccaaa aataccaagg gcacgccgcc atacgctgcg acagccccga ccaccttccc
     6541 ctagtcggcg cactcggcga cattgccgcc atgcggcaga cctacaccaa actcgcgctg
     6601 gacaaaaact accgcatcga caccccatgc ccatacctgc ctaatgccta cgtcaacacc
     6661 gcccacggca cacgcgggct tgccaccgcc cccatctgcg ccgccgccgt tgcagccgaa
     6721 atcctaggct tgccccatcc cctctcaaaa cgcctgcgcc acgccctaca ccccaaccgc
     6781 accatcatcc gcgccatcgt cagaaggaag gatctaaccc cttaagcctt tgccgcatgc
     6841 cgtcccgacc acagaaaatc atattcaaat aaacatacca atcctgacgg taaaatatcg
     6901 aaaacaccca taacgttttc ttcccaaaat aaggagtaag gaatgcctaa caaattgcct
     6961 ttgctgtcta agatgaatgt tccgtaacat tcgaagactt ccttaaccct gccagccgtt
     7021 tcggtttctg taccccctgt tagataagga aggaatgaaa aagccctgtt gattgtatga
     7081 agtaaagggc gttaattttt gttaatcttc ccttctcagg aactcaatat ataaggatgt
     7141 taatttttat ttcccttctc gagg
//
LOCUS       DAWITQ010000103         7123 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.103, whole genome shotgun sequence.
ACCESSION   DAWITQ010000103 DAWITQ010000000
VERSION     DAWITQ010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7123)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7123)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7123
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.103"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(79..1425)
                     /gene="mnmE"
                     /locus_tag="WIX18_001540"
     CDS             complement(79..1425)
                     /gene="mnmE"
                     /locus_tag="WIX18_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEZ5238632.1"
                     /translation="MSDNVPTIAAVATAPGRGGVGVIRISGKNLLPMAEALCGKTPKP
                     RVATYADFTDADGQAIDSGLLLFFAAPASFTGEDVIELQGHGGPVVMDMLLNRCLELG
                     ARLAEPGEFTKRSFLNDKLDLAQAEGVADLIDASSRSAARLALRSLKGDFSRRIHGLV
                     EDLITLRMLVEATLDFPEEDIDFLEAADARGKLDGLRRAVDDVLANAQQGAILREGLN
                     VVLVGAPNVGKSSLLNALAGDEVAIVTDIAGTTRDAVRERILIDGVPVHIVDTAGLRE
                     TDDVVERIGIERSRKAVSEADVALVLVDPREGVNDKTRAILDALPPELKRIEIHSKSD
                     LHAHAAGGFGTGAETVIALSAKTGDGLDALKRTLLREAGWQGEGEGLFLARTRHVNAL
                     KAAQEELSLAALCGNHQIELFAEHLRLAQVACGEITGEFTADDLLGVIFSRFCIGK"
     gene            1556..1711
                     /locus_tag="WIX18_001541"
     CDS             1556..1711
                     /locus_tag="WIX18_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238633.1"
                     /translation="MEKRNTYAFLLGIGSLLGLFNPAKTAIRPNPADDLKNIGGDFQR
                     AIEKARK"
     gene            1708..2139
                     /locus_tag="WIX18_001542"
     CDS             1708..2139
                     /locus_tag="WIX18_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2335 domain-containing protein"
                     /protein_id="HEZ5238634.1"
                     /translation="MTENAQDKARQAVETVVKSPELVEQILSDEYVQIMIARRFHSGP
                     LPPPSDLAQYNDIISNGADRIMAMAEKEQAVRHETIRQDQTFNRRGQLYGFISVILIL
                     LFAVFLVWSGYPATAASLAGGTVVALAGAFVIGRSRDQGKN"
     gene            2273..6682
                     /gene="app"
                     /locus_tag="WIX18_001543"
     CDS             2273..6682
                     /gene="app"
                     /locus_tag="WIX18_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_168458961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesion and penetration autotransporter App"
                     /protein_id="HEZ5238635.1"
                     /translation="MKTTDKRTTETHRKAPKTGRIRFSPAYLAICLSFGILPQAWAGH
                     TYFGINYQYYRDFAENKGKFAVGAKDIEVYNKKGELVGKSMTKAPMIDFSVVSRNGVA
                     ALVGDQYIVSVAHNGGYNNVDFGAEGSNPDQHRFSYQIVKRNNYKAGTKGHPYGGDYH
                     MPRLHKFVTDAEPVEMTSYMDGWKYTDQNNYPDRVRIGAGRQYWRSDEDEPNNRESSY
                     HIASAYSWLVGGNTFAQNGSGGGTVNLGSEKIKHSPYGFLPTGGSFGDSGSPMFIYDA
                     QKQKWLINGVLQTGNPYIGKSNGFQLVRKNWFYDEIFTGDTHSVFYEPHQNGKYTFHD
                     NNNGTGKINAKHEHNSLPNRLKTRTVQLFNVSLSETAREPVYHAAGGVNSYRPRLNNG
                     ENISFIDEGKGELILTSNINQGAGGLYFQGDFTVSPENNETWQGAGVHISEDSTVTWK
                     VNGVANDRLSKIGKGTLHVQAKGENQGSISVGDGTVILDQQADDKGKKQAFSEIGLVS
                     GRGTVQLNADNQFNPDKLYFGFRGGRLDLNRHSLSFHRIQNTDEGAMIVNHNATTTST
                     VTITGNESITQPSGKNINRLNYSKEIAYNGWFGEKDATKTNGRLNLVYQPAAEDRTLL
                     LSGGTNLNGNITQTNGKLFFSGRPTPHAYNHLNNHWSQKEGIPHGEIVWDNDWINRTF
                     KAENFHIQGGQAVISRNVAKVEGDWHLSNHAQAVFGVAPHQSHTICTRSDWTGLTNCV
                     ENTITDDKVIASLTNTDISGNVDLADHAHLNLTGLATLNGNLTAGGDTHYEVTHNATQ
                     RGNLSLVGNAQATFNQATLNGNTSASGNASFNLSNNAVQNGSLTLSGNAKANVSHSAL
                     NGNVSLADKAVFHFENSRLTGQISGGKDTALHLKDSEWTLPSGTELGNLNLDNATITL
                     NSAYRHDAAGAQTGSVSDTPRRRSRRSRRSRRSRRSLLSVTPPTSAESRFNTLTVNGK
                     LNGQGTFRFMSELFGYRSDKLKLAESSEGTYTLAVNNTGNEPASLEQLTVVEGKDNKP
                     LSENLNFTLQNEHVDAGAWRYQLIRKDGEFRLHNPVKEQELSDKLGKAEAKKQAGKDN
                     AQSLDALIAAGRDAVEKTESVAEPARQAGGENVGIMQAEEEKKRVQADKDSALAKQRE
                     AETRPATTAFPRARRARRDLPQPQPQPQPQPQPQPQRDLISRYANSGLSEFSATLNSV
                     FAVQDELDRVFAEDRRNAVWTSGIRDTKHYRSQDFRAYRQQTDLRQIGMQKNLGSGRV
                     GILFSHNRTENTFDDGIGNSARLAHGAVFGQYGIDRFYIGISAGAGFSSGSLSDGIGG
                     KIRRRVLHYGIQARYRAGFGGFGIEPHIGATRYFVQKADYRYENVNIATPGLSFNRYR
                     AGIKADYSFKPAQHISITPYLSLSYTDAASGKVRTRVNTAVLAQDFGKTRSAEWGVNA
                     EIKGFMLSLHAAAAKGPQLEAQHSAGIKLGYRW"
     gene            complement(6998..>7123)
                     /locus_tag="WIX18_001544"
     CDS             complement(6998..>7123)
                     /locus_tag="WIX18_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ5238636.1"
                     /translation="KFRYARAAYFGLSKVSAQSHLKAMCLNLLKAANRLSAPAAA"
BASE COUNT         1892 a         2059 c         1731 g         1441 t
ORIGIN      
        1 aaccaaacgg atcggattcc cgtttttatg ggataacgga atgttcagcc ggacaccgcc
       61 acgatgcttt cgatccgttt attttccgat acaaaacctc gaaaaaatca cgccgagcag
      121 gtcgtccgcc gtaaactcgc ccgtgatttc gccgcatgcg acctgcgcca agcgcaagtg
      181 ttcggcaaac agctcgattt gatggttgcc gcacaatgcc gccagcgaca attcttcctg
      241 cgctgctttg agtgcgttga cgtgccgcgt ccgcgccaaa aacagccctt cgccctcgcc
      301 ctgccatccg gcctcgcgca acaacgtccg tttcagcgcg tccaagccgt cgccggtttt
      361 cgccgacagc gcgatgacgg tttccgcgcc cgtaccgaac ccgcctgccg cgtgtgcgtg
      421 caaatcggat ttgctgtgga tttcgatgcg tttcaactcc ggcggcaacg cgtccaaaat
      481 cgcccgtgtc ttgtcgttca cgccttcgcg cggatcgacc aacaccagcg cgacatcggc
      541 ttcggatacg gctttgcggc tgcgttcgat gccgatgcgt tcgaccacgt cgtccgtctc
      601 gcgcaaacct gccgtatcga caatatgcac cggaacgccg tcaatcagga tacgttccct
      661 gaccgcgtcg cgcgtcgttc cggcaatatc ggtaacaatc gccacttcgt cgcccgccag
      721 cgcgttcaac aggctggatt tgccgacatt cggcgcgccg accaatacga cattcagacc
      781 ttcgcgcaaa atcgcgccct gctgcgcgtt ggcaagcaca tcatccacgg cgcggcgcaa
      841 gccgtccagt ttgccgcgtg cgtctgccgc ttcgagaaaa tcaatgtctt cctcgggaaa
      901 atctaacgtc gcttcgacca gcatccgcaa ggtaatcaag tcttcgacca gaccgtgtat
      961 ccgccgcgaa aaatcgcctt tgagcgagcg caacgccaga cgcgccgccg aacggctgga
     1021 tgcgtcaatc aaatccgcca cgccttccgc ctgtgccaag tccagtttgt cgtttaaaaa
     1081 cgaacgcttc gtaaactcgc ccggttcggc aaggcgcgcg cccaattcca aacagcggtt
     1141 cagcagcata tccatcacta ccggcccgcc gtgtccctga agctcgataa catcttcgcc
     1201 cgtaaaactt gccggtgcgg caaaaaaaag caaaagcccg ctgtcgattg cctgaccgtc
     1261 cgcgtccgta aaatcagcat aggttgccac gcgcggcttg ggcgttttcc cacacaaagc
     1321 ctctgccatc ggcagcaggt ttttccccga tatgcgtatc acgcccacgc cgccgcgccc
     1381 gggtgcggta gcgactgccg caatcgttgg aacgttatcc gacataaaac ccccgaaaat
     1441 tcaaaacagc cgcgattata gcaaatgccg tctgaagtcc gacggtttgg ctttcagacg
     1501 gcataaaacc gcaaaaatgc ttgataaatc cgtccgcctg acctaatata accatatgga
     1561 aaaacgaaac acatacgcct tcctgctcgg tataggctcg ctgctgggtc tgttcaatcc
     1621 cgcaaaaacc gccatccgcc ccaatcccgc cgacgatctc aaaaacatcg gcggcgattt
     1681 tcaacgcgcc atagagaaag cgcgcaaatg accgaaaacg cacaggacaa ggcgcggcag
     1741 gctgtcgaaa ccgtcgtcaa atccccggag cttgtcgagc aaatcctgtc cgacgagtac
     1801 gtgcaaataa tgatagcccg gcgtttccat tcgggaccgt tgccgccgcc gtccgacttg
     1861 gcgcaataca acgacattat cagcaacggg gcagaccgca ttatggcaat ggcggaaaaa
     1921 gaacaagccg tccggcacga aaccatacgg caagaccaaa ccttcaacag gcgcgggcaa
     1981 ctgtacggct tcatcagcgt catcctgata ctgctttttg ccgtcttcct cgtatggagc
     2041 ggctaccccg caaccgccgc ctcccttgcc ggcggcacag tggttgcctt ggcgggtgct
     2101 ttcgtgattg gaagaagccg agaccaaggc aaaaattaat gacaaatcct agggcgtgct
     2161 tcatatccgc ccgaacgccg aaccgcacat ataggcacat cccgcgcgcc gcccggaagc
     2221 ggaagccgcg ccctcccaaa caaacccgaa tcccgtcaga taaggaaaaa taatgaaaac
     2281 aaccgacaaa cggacaaccg aaacacaccg caaagccccg aaaaccggcc gcatccgctt
     2341 ctcgcctgct tacttagcca tatgcctgtc gttcggcatt cttccccaag cttgggcggg
     2401 acacacttat ttcggcatca actaccaata ctatcgcgac tttgccgaaa ataaaggcaa
     2461 gtttgcagtc ggggcgaaag atattgaggt ttacaacaaa aaaggggagt tggtcggcaa
     2521 atcaatgaca aaagccccga tgattgattt ttctgtggtg tcgcgtaacg gcgtggcggc
     2581 attggtgggc gatcaatata ttgtgagcgt ggcacataac ggcggttata acaatgttga
     2641 ttttggtgcg gagggaagca atcccgatca gcaccgtttt tcttaccaaa ttgtgaaaag
     2701 aaataattat aaagcaggga ctaaaggcca tccttatggc ggcgattatc atatgccgcg
     2761 tttgcataaa tttgtcacag atgcagaacc tgttgagatg accagttata tggatgggtg
     2821 gaaatatacc gatcaaaata attatcctga ccgtgttcga atcggagcag gcagacaata
     2881 ttggcggtct gatgaagatg aacccaataa ccgcgaaagt tcatatcata ttgcaagtgc
     2941 gtattcttgg ctcgttggtg gcaatacctt tgcacaaaat ggatcaggtg gtggcacagt
     3001 caacttaggt agtgaaaaaa ttaaacatag cccatatggt tttttaccaa caggaggctc
     3061 atttggcgac agtggctcac caatgtttat ctatgatgcc caaaagcaaa agtggttaat
     3121 taatggggta ttgcaaacag gcaaccccta tataggaaaa agcaatggct tccagctagt
     3181 gcgtaaaaat tggttttatg acgaaatttt taccggagat acccattcag tattctacga
     3241 accacatcaa aatgggaaat acacttttca cgacaataat aatggcacag gaaaaatcaa
     3301 tgccaaacat gaacacaatt ctctgcctaa tagattaaaa acacgaaccg ttcaattgtt
     3361 taatgtttct ttatccgaga cagcaagaga acctgtttat catgctgcag gtggtgtcaa
     3421 cagttatcga cccagactga ataatggaga aaatatttcc tttattgacg aagggaaagg
     3481 cgaattgata cttaccagta acatcaacca aggtgctgga ggattatatt tccaaggaga
     3541 ttttacggtc tcgcctgaaa acaacgaaac gtggcaaggt gcgggcgttc atatcagtga
     3601 agacagtacc gttacttgga aagtaaacgg cgtggcaaac gaccgcctgt ccaaaatcgg
     3661 caaaggcacg ctgcacgttc aagccaaagg ggaaaaccaa ggctcgatca gcgtgggcga
     3721 cggtacagtc attttggatc agcaggcaga cgataaaggc aaaaaacaag cctttagtga
     3781 aatcggcttg gtcagcggca ggggtacggt gcaactgaat gccgataatc agttcaaccc
     3841 cgacaaactc tatttcggct ttcgcggcgg acgtttggat ttaaacaggc attcgctttc
     3901 gttccaccgt attcaaaata ccgatgaagg ggcgatgatt gtcaatcata atgccacaac
     3961 aacatccacc gttaccatta cagggaatga aagtattaca caaccgagtg gtaagaatat
     4021 caatagactt aattacagca aagaaattgc ctacaacggt tggtttggcg agaaagatgc
     4081 gaccaaaacg aatgggcggc tcaaccttgt ttaccagccc gccgcagaag accgcaccct
     4141 gctgctttcc ggcggaacaa atttaaacgg taacatcacg caaacaaacg gcaaactgtt
     4201 tttcagcggc agaccaacac cgcacgccta caatcattta aacaaccatt ggtcgcaaaa
     4261 agagggcatt ccgcacggag aaatcgtgtg ggacaacgac tggattaacc gcacgtttaa
     4321 agcggaaaat ttccatattc agggcgggca ggcggtgatt tcccgcaatg ttgccaaagt
     4381 ggaaggcgat tggcatttga gcaatcacgc ccaagcagtt ttcggtgtcg caccgcatca
     4441 aagccacaca atctgtacac gttcggactg gacgggtctg acaaattgtg tcgaaaacac
     4501 cattaccgac gataaagtga ttgcttcatt gaccaatacc gacatcagcg gcaatgtcga
     4561 tcttgccgat cacgctcatt taaatctcac agggcttgcc acgctcaacg gcaatctgac
     4621 cgcaggcgga gacacgcact atgaggttac gcacaacgcc acccaaagag gcaaccttag
     4681 cctcgtgggc aatgcccaag caacatttaa tcaagccaca ttaaacggaa acacatcggc
     4741 ttcgggcaat gcttcattta atctaagcaa caacgccgta caaaacggca gtctgacgct
     4801 ttccggcaac gctaaggcaa acgtaagcca ttccgcactc aacggcaatg tctccctagc
     4861 cgataaggca gtattccatt ttgaaaacag ccgccttacc ggacaaatca gcggcggcaa
     4921 ggatacggca ttacacttaa aagacagcga atggacgctg ccgtcaggca cggaattagg
     4981 caatttaaac cttgacaacg ccaccattac actcaattcc gcctatcgcc acgatgctgc
     5041 aggcgcgcaa accggcagtg tgtcagacac gccgcgccgc cgttcgcgcc gttcgcgccg
     5101 ttcgcgccgt tcgcgccgtt ccctattatc cgttacaccg ccaacttcgg cagaatcccg
     5161 tttcaacacg ctgacggtaa acggcaaatt gaacggtcag ggaacattcc gctttatgtc
     5221 ggaactcttc ggctaccgca gcgacaaatt gaagctggcg gaaagttccg aaggcactta
     5281 caccttggcg gtcaacaata ccggcaacga acctgcaagc ctcgaacaat tgacggtagt
     5341 ggaaggaaaa gacaacaaac cgctgtccga aaaccttaat ttcaccctgc aaaacgaaca
     5401 cgtcgatgcc ggcgcgtggc gttaccaact catccgcaaa gacggcgagt tccgcctgca
     5461 taatccggtc aaagaacaag agctttccga caaactcggc aaggcagaag ccaaaaaaca
     5521 ggcgggaaaa gacaacgcgc aaagccttga cgcgctgatt gcggccgggc gcgatgccgt
     5581 cgaaaagaca gaaagcgttg ccgaaccggc ccggcaggca ggcggggaaa atgtcggcat
     5641 tatgcaggcg gaggaagaga aaaaacgggt gcaggcggat aaagacagcg ccttggcgaa
     5701 acagcgcgaa gcggaaaccc ggccggctac caccgccttc ccccgcgccc gccgcgcccg
     5761 ccgggatttg ccgcaaccgc aaccccaacc gcaaccccaa ccgcagcccc aaccgcagcg
     5821 cgacctgatc agccgttatg ccaatagcgg tttgagtgaa ttttccgcca cgctcaacag
     5881 cgttttcgcc gtacaagacg aattagaccg cgtatttgcc gaagaccgcc gcaacgccgt
     5941 ttggacaagc ggcatccggg acaccaaaca ctaccgttcg caagatttcc gcgcctaccg
     6001 ccaacaaacc gacctgcgcc aaatcggtat gcagaaaaac ctcggcagcg ggcgcgtcgg
     6061 catcctgttt tcgcacaacc ggaccgaaaa caccttcgac gacggcatcg gcaactcggc
     6121 acggcttgcc cacggcgccg ttttcgggca atacggcatc gacaggttct acatcggcat
     6181 cagcgcgggc gcgggtttta gcagcggcag cctttcagac ggcatcggag gcaaaatccg
     6241 ccgccgcgtg ctgcattacg gcattcaggc acgataccgc gccggtttcg gcggattcgg
     6301 catcgaaccg cacatcggcg caacgcgcta tttcgtccaa aaagcggatt accgctacga
     6361 aaacgtcaat atcgccaccc ccggtctttc gttcaaccgc taccgcgcgg gcattaaggc
     6421 agattattca ttcaaaccgg cacaacacat ttccatcacg ccttatttga gcctgtccta
     6481 taccgatgcc gcttcgggca aagtccgaac acgcgtcaat accgccgtat tggctcagga
     6541 tttcggcaaa acccgcagtg cggaatgggg cgtaaacgcc gaaatcaaag gtttcatgct
     6601 gtccctccac gctgccgccg ccaaaggccc gcaactggaa gcgcaacaca gcgcgggcat
     6661 caaattaggc taccgctggt aaccgccgga tatgccgaaa ggggtctgac gatgccaccg
     6721 tgcgctgtca aacccttttt ctgccgccgc cttgtgcctg ctccattgtc tgataaccgt
     6781 caaattgatt tttagcccat gtttggtggg tcggggaaat ctatatcttc gtccgtgccg
     6841 aaatagtctg agacctttgc aaaattcctt tccctcccga cagccgaaac ccaaacacag
     6901 gttttcgtct attttcgccc caaatacctc ctaattctac ccaaataccc ccttaatcct
     6961 ccacggacac ccgataatca ggcatccggg ctgcttttta ggcggcagcg ggcgcactta
     7021 gcctgttggc cgctttcaaa aggttcaaac acatcgcctt cagatggctt tgtgcactca
     7081 ctttgctcag cccgaaatag gctgcccgcg catagcggaa ttt
//
LOCUS       DAWITQ010000104         7112 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.104, whole genome shotgun sequence.
ACCESSION   DAWITQ010000104 DAWITQ010000000
VERSION     DAWITQ010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7112)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7112)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7112
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.104"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            140..721
                     /locus_tag="WIX18_001545"
     CDS             140..721
                     /locus_tag="WIX18_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEZ5238637.1"
                     /translation="MEEKNDYTDAASDNRNGQEIEVGIAGAGDRILAALLNQLFTFLV
                     LLVPFAGLIAFAIKNEGRIGGSEEIFGLLLGMTSFWVGLAGILVYTVVQIYYMSRDGQ
                     SLGKKIMRIRVLKTDGRNPGFVGTVLVREIAWSVLVAIIAAVIGLAVGDNGENAINLL
                     AFLANFVLLFMVKRDRRTLYDILADTVVVKLPK"
     gene            complement(783..1637)
                     /gene="folD"
                     /locus_tag="WIX18_001546"
     CDS             complement(783..1637)
                     /gene="folD"
                     /locus_tag="WIX18_001546"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HEZ5238638.1"
                     /translation="MSAQLINGKEVSQKRLQAVAEAVAQRQQDNLHMPCLAVVLVGGD
                     PASAVYVRNKKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLP
                     KHLDSQAVLERISPDKDVDGFHPYNVGRLAVKMPLMRPCTPKGVMTLLEAYGIDPKGK
                     KAVVVGASNIVGRPQALELLLARATVTVCHSATENLADEVAGADILVVGVGIPNFVKG
                     EWIKPGAVVIDVGINRLDDGSLCGDVKFETAKERAAMITPVPGGVGPMTIATLMENTL
                     HAASLHDA"
     gene            1860..1937
                     /locus_tag="WIX18_001547"
     tRNA            1860..1937
                     /locus_tag="WIX18_001547"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1895..1897,aa:Pro,seq:tgg)
     gene            1962..2038
                     /locus_tag="WIX18_001548"
     tRNA            1962..2038
                     /locus_tag="WIX18_001548"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1996..1998,aa:Arg,seq:tct)
     gene            2066..2141
                     /locus_tag="WIX18_001549"
     tRNA            2066..2141
                     /locus_tag="WIX18_001549"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2099..2101,aa:His,seq:gtg)
     gene            2277..2783
                     /locus_tag="WIX18_001550"
     CDS             2277..2783
                     /locus_tag="WIX18_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional heptose 7-phosphate kinase/heptose
                     1-phosphate adenyltransferase"
                     /protein_id="HEZ5238639.1"
                     /translation="MVDAWSVPDFESKICPPEALAARLALLPRPLVFTNGCFDILHRG
                     HVTYLAQARSMGGALVLALNTDASVRRLGKGGDRPINPLENRAAVAAALESVDLVTWF
                     DGDTPAALIEAVKPEILVKGGDWAADKIVGAAETLARGGQVFSIPFLHQTSTTKTLAK
                     IRAAEGGK"
     gene            2780..4558
                     /locus_tag="WIX18_001551"
     CDS             2780..4558
                     /locus_tag="WIX18_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     ligase/type III pantothenate kinase"
                     /protein_id="HEZ5238640.1"
                     /translation="MTVLKPSHWRVLAELADGLPQHVSQLARMADMKPQQLNGFWQQM
                     PAHIRGLLRQHDGYWRLVRPLAVFDAEGLRELGERSGFQTALKHECASSNDEILELAR
                     IAPDKAHKTICVTHLQSKGRGRQGRKWSHRLGECLMFSFGWVFDRPQYELGSLSPVAA
                     VACRRALSRLGLKTQIKWPNDLVVGRDKLGGILIETVRTGGKTVAVVGIGINFVLPKE
                     VENAASVQSLFQTASRRGNADAAVLLETLLVELDAVLLQYARDGFAPFVAEYQAANRD
                     HGKAVLLLRDGETVFEGTVKGVDGQGVLHLETAEGKQTVVSGEISLRPDDRPVSVPKR
                     RDSERFLLLDGGNSRLKWAWVENGTFATVGSAPYRDLSPLGAEWAEKADGNVRIVGCA
                     VCGEFKKAQVQEQLARKIEWLPSSAQALGIRNHYRHPEEHGSDRWFNALGSRRFSRNA
                     CVVVSCGTAVTVDALTDDGHYLGGTIMPGFHLMKESLAVRTANLNRHAGKRYPFPTTT
                     GNAVASGMMDAVCGSVMMMHGRLKEKTGAGKPVDVIITGGGAAKVAEALPPAFLAENT
                     VRVADNLVIHGLLNLIAAEGGESEHT"
     gene            4671..5495
                     /locus_tag="WIX18_001552"
     CDS             4671..5495
                     /locus_tag="WIX18_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HEZ5238641.1"
                     /translation="MKWLFTLLAVLNIAVFGGTVGYKLAVKATGGVPENRAVENTPPA
                     TPAADNAAASVEDTAALLKPGDILTEEQAEQLRLKKEAEQKKLKEKKQREEKARREKL
                     AAEKAQAERENGAADALCAAQASLTMDEDDYHRIKGLLGKWSHVASRSVEKRTAKAKP
                     ADKTYRVVLPVSADAENQAAELSAKGFNPIPFDGALSLGVGNSRENAQALQNRLAGAG
                     FGGAHIVEHFAEADRQDDSLSVSRMTVLFTGVNAADADEIRKITSLYGKLNLKSCK"
     gene            complement(6258..7046)
                     /locus_tag="WIX18_001553"
     CDS             complement(6258..7046)
                     /locus_tag="WIX18_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HEZ5238642.1"
                     /translation="MLTLYSETFPSRLLLGTAAYPTPEILKQSVRTARPAMITVSLRR
                     AGCGGEAHGQGFWSLLQETGVPVLPNTAGCQSVQEAVTTAQMAREVFETDWIKLELIG
                     DDDTLQPDVFQLVEAAEILIKDGFKVLPYCTEDLIACRRLLDAGCQALMPWAAPIGTG
                     LGAVHAYALNVLRERLPYTPLIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSGDPVN
                     MARAFALAVESGRLAFEAGPVEARDKAQASTPTVGQPFWHSAEY"
BASE COUNT         1524 a         1838 c         2140 g         1610 t
ORIGIN      
        1 atgtatggcg taaaggaagc gttttaacgc cgtattggga aaatgtaaag ttctttatcg
       61 ggatttcttt aagtattggc gttttcggtg tcgtggcggt agaatcgggg tcagttaaga
      121 acaattatca ggaacggata tggaagaaaa aaacgactac accgacgcgg catccgacaa
      181 ccgcaacggg caggaaattg aagtcggaat tgccggcgca ggcgaccgga tacttgccgc
      241 gctgctgaac caattgttta cctttttggt tttgttggtg ccgtttgccg gactgattgc
      301 tttcgccatc aagaatgaag gcaggattgg cggcagtgag gaaatattcg ggctgctttt
      361 gggcatgact tccttttggg taggactggc gggcattttg gtttataccg tcgttcaaat
      421 ctactatatg agtcgggacg ggcagtcatt gggtaagaag atcatgagaa tcagggtgtt
      481 gaaaaccgac ggccgcaatc cgggttttgt cggcacggtt ttggtacgcg aaatcgcatg
      541 gtcggttttg gttgccatta ttgccgccgt tatcggtctt gcagtaggtg acaacggaga
      601 aaacgccatc aacctgctgg cattccttgc caactttgtc ctgctcttta tggtcaaacg
      661 cgaccgccgc acgctttacg acatactggc ggatacggtt gtcgtcaagc tgcccaaata
      721 aacggacacg gcaaaatgcc gtctgaaagc ctttcagacg gcatttttat cttcagaacc
      781 gctcaagcat cgtgcagtga agccgcgtgc agggtgtttt ccatcaatgt ggcaatcgtc
      841 atcggaccca cgccgccggg aacgggcgta atcatcgccg cccgttcttt tgccgtttca
      901 aatttcacgt cgccgcacag gctgccgtcg tccaaacggt tgatgcccac atcgataacg
      961 accgcgccgg gtttgatcca ttcgcctttg acaaagttcg gaatgcccac gccgaccacc
     1021 aaaatatcgg ctccggcaac ctcgtctgcc agattttcgg ttgcgctgtg gcagaccgtt
     1081 accgttgcgc gcgccagcag cagttccaaa gcctgcgggc ggccgacgat attcgacgcg
     1141 ccgaccacga ccgctttttt ccccttcgga tcaatgccgt aagcttccaa aagcgtcatc
     1201 acgcccttgg gcgtacacgg gcgcatcagc ggcattttga ccgccagcct gccgacattg
     1261 taaggatgga agccgtccac gtccttatcc ggcgaaatac gttccaaaac cgcctggctg
     1321 tcgaggtgct tcggcagggg cagctgaacc agaataccgt ccacttcgga atcggcattc
     1381 aggcggtcga ccagtgccag cagttcttcc tgcgatgttg attcgggcag ttcgtaagac
     1441 agtgatttga tgccgcattt ttggcaggca gttttcttgt tgcggacata aaccgcgctg
     1501 gcagggtcgc ctccgaccaa aaccacggcc aggcaaggca tgtgcagatt gtcctgttgg
     1561 cgttgcgcca ccgcttcggc aaccgcctgc aggcgttttt gcgaaacttc tttaccattg
     1621 atcagttgtg ccgacatatc cgtccttttg ttaaacaggt agaaaatgct gaaaattatc
     1681 gcattttccg tttgttttta cagcaggatg ccgaaaataa atttgccctg aaataaaata
     1741 cggctgtttg gacggattaa atattttttc aaatcaaaaa actatatttt tcatcttggt
     1801 gtcttgaaaa taaatattga cgcatctttc cctgagttgt atagttcgct tcttcaagtc
     1861 ggggcgtagc gcagcccggt tagcgcatct gctttgggag cagagggtcg tgagttcgaa
     1921 tcccaccgcc ccgaccaatc aatcagcacg aatcggcatg agcgcccgta gctcaaccgg
     1981 atagagcacc gaccttctaa gtcgggggtt acaggttcga ttcctgtcgg gcgtgccaag
     2041 aatttgattg aaaaccgttt ttatggtggc tgtagctcag ttggtagagc cccggattgt
     2101 gattccggtt gtcgtgggtt cgagccccat cagccacccc agataaaggc ccgtactttt
     2161 cggtacgggt cttttcccgt ttgcgcgtac tgtccgcgcc gccggctttg cctttcgcat
     2221 atgcttctgt atcatgtggg tttttctgtc ttttatggtt tttgtcggag gctttgatgg
     2281 ttgacgcttg gtctgtccct gattttgaat cgaaaatctg tccgcccgag gcgttggcgg
     2341 cgcgtttggc gttgttgccg cgcccgctgg tgtttaccaa cggctgtttc gacatcctcc
     2401 acagggggca tgttacttat ctggcgcagg cgcgttcgat ggggggcgcg ttggtgctgg
     2461 cgttgaatac cgatgcttcg gtgcggcgtt tgggcaaggg cggcgaccgc ccgattaatc
     2521 ctttggagaa ccgtgccgcc gttgccgccg cgttggaaag tgtggatttg gtaacgtggt
     2581 ttgacgggga tacgccggcg gcgttgattg aggcggtcaa acctgaaatt ttggtcaagg
     2641 gcggcgattg ggctgcggat aagattgtcg gtgcggcaga aacgttggcg cgcggcggtc
     2701 aggtgttttc aattccgttt ctgcaccaga cttcgacaac gaagactttg gcaaaaatcc
     2761 gtgcggcaga gggcggaaaa tgacggtttt gaagccttcg cactggcggg tgttggcgga
     2821 gcttgccgac ggtttgccgc aacacgtctc gcaactggcg cgtatggcgg atatgaagcc
     2881 gcagcagctc aacggttttt ggcagcagat gccggcgcac atacgcgggc tgttgcgcca
     2941 acacgacggc tattggcggc tggtgcgccc attggcggtt ttcgatgccg aaggtttgcg
     3001 cgagctgggg gaaaggtcgg gttttcagac ggcattgaag cacgagtgcg cgtccagcaa
     3061 cgacgagata ctggaattgg cgcggattgc gccggacaag gcgcacaaaa ccatatgtgt
     3121 gacccacctg caaagtaagg gcagggggcg gcaggggcgg aagtggtcgc accgtttggg
     3181 cgagtgtctg atgttcagtt ttggctgggt gtttgaccgg ccgcagtatg agttgggttc
     3241 gctgtcgcct gttgcggcag tggcgtgccg gcgcgccttg tcgcgtttgg gtttgaaaac
     3301 gcaaatcaag tggccaaacg atttggtcgt cggacgcgac aaattgggcg gcattctgat
     3361 tgaaacggtc aggacgggcg gcaaaacggt tgccgtggtc ggtatcggca tcaatttcgt
     3421 gctgcccaag gaagtggaaa acgccgcttc cgtgcaatcg ctgtttcaga cggcatcgcg
     3481 gcggggaaat gccgatgccg ccgtgttgct ggaaacgctg ttggtggaac tggacgcggt
     3541 gttgttgcaa tatgcgcggg acggatttgc gccttttgtg gcggaatatc aggctgccaa
     3601 ccgcgaccac ggcaaggcgg tattgctgtt gcgcgacggc gaaaccgtgt tcgaaggcac
     3661 ggttaaaggc gtggacggac aaggcgttct gcacttggaa acggcagagg gcaaacagac
     3721 ggtcgtcagc ggcgaaatca gcctgcggcc cgacgacaga ccggtttccg tgccgaagcg
     3781 gcgggattcg gaacgttttc tgctgttgga cggcggcaac agccggctca agtgggcgtg
     3841 ggtggaaaac ggcacgttcg caaccgtcgg tagcgcgccg taccgcgatt tgtcgccttt
     3901 gggcgcggag tgggcggaaa aggcggatgg aaatgtccgc atcgtcggtt gcgctgtgtg
     3961 cggagaattc aaaaaggcac aagtgcagga acagctcgcc cgaaaaatcg agtggctgcc
     4021 gtcttcggca caggctttgg gcatacgcaa ccactaccgc caccccgaag aacacggttc
     4081 cgaccgctgg ttcaacgcct tgggcagccg ccgcttcagc cgcaacgcct gcgtcgtcgt
     4141 cagttgcggc acggcggtaa cggttgacgc gctcaccgat gacggacatt atctcggggg
     4201 aaccatcatg cctggtttcc acctgatgaa agaatcgctc gccgtccgaa ccgccaacct
     4261 caaccggcac gccggtaagc gttatccttt cccgaccaca acgggcaatg ccgtcgccag
     4321 cggcatgatg gatgcggttt gcggctcggt tatgatgatg cacgggcgtt tgaaagaaaa
     4381 aaccggggcg ggcaagcctg tcgatgtcat cattaccggc ggcggcgcgg caaaagttgc
     4441 cgaagccctg ccgcctgcat ttttggcgga aaataccgtg cgcgtggcgg acaacctcgt
     4501 cattcacggg ctgctgaacc tgattgccgc cgaaggcggg gaatcggaac atacttaaaa
     4561 aatacaccct ttttcaacac ggggcggcat ccgtccgaat ccgtccggat tctgccgccc
     4621 gacagactgc cgcccaggcg ggcggggttt caaacattga ggaaattcta atgaaatggc
     4681 tcttcaccct tttggcggta ctcaatattg ccgtattcgg cggcacggtg ggctataaat
     4741 tggccgttaa agcgacgggc ggcgtgccgg aaaaccgggc cgtcgaaaac acgccccccg
     4801 caacgcccgc cgccgacaat gcggcggcat ccgtggagga tacggcggca ctgctcaaac
     4861 cgggcgacat cctgaccgaa gagcaggccg agcagttgcg cttgaaaaag gaagcggaac
     4921 agaaaaaact gaaagagaaa aaacagcgtg aagaaaaagc ccgccgcgaa aaactcgccg
     4981 ccgaaaaggc gcaggcggaa cgcgaaaacg gcgcggcgga tgccttatgc gccgcgcagg
     5041 caagcctcac gatggacgaa gatgactacc accgcatcaa agggcttttg ggcaaatggt
     5101 cgcacgttgc cagcaggagt gttgaaaaac gcaccgccaa agccaaacct gccgacaaaa
     5161 cctaccgcgt cgtcctgccc gtttccgccg atgccgaaaa tcaggcggcg gagctgtctg
     5221 ccaaaggttt caaccccata ccgtttgacg gcgcattgag tttgggtgtc ggcaacagcc
     5281 gggaaaacgc ccaagccctg caaaaccggc ttgccggcgc cggattcggc ggggcgcata
     5341 ttgtcgaaca ctttgccgaa gccgacaggc aggacgattc tttgagcgtg tcgcgtatga
     5401 cggttttgtt taccggcgtg aatgccgccg atgcggacga aattcgtaaa atcacgtccc
     5461 tatacggcaa actgaacctc aagtcttgca aataggcgcg aaagccggac gataaacgcc
     5521 aaacccaccg cgaaggtggg tttggcgttt cggttttgag tatctgatat ataaaaaggg
     5581 aatgtatgtc tcgtatatgc cgactccaag tgtgaaagtg atgatgggga aatatggtgt
     5641 ttaatggttc ggaacggacg acttccgagt ggttttgatt atacgctaat aataataatt
     5701 atcaataaaa atttaaaaat aaatgcagat tttttgtaat acgatgaaaa ataaacaaat
     5761 taaactattt gccgatgttg gtgattcggg tcggcaaact ttcattgtgt cggacaaatc
     5821 ggggtcggca gtcatagctg agggcttcgt gcctgacgga aataaggttg cccgtgtttg
     5881 aacatccgtc cgattgggcg cggacgaggt tgtcattcgg gggtgtttga gcgtggattc
     5941 ggggatgcaa aagcggtaaa accgttgcgg atgaaggctt acggacggct ttaggtattt
     6001 ttaagtgtat tcaaacaaca acaaaacgct tcttctattg ccgtatttag ggcttgcgcg
     6061 gcagcctgca caccgtggag gccgagtgtt tcgttggttg cggcatcggg acgggcggca
     6121 aggttttccg gccggttttt ccattttttc cgacaaagcc gtgatgccgg ggaatggcgg
     6181 tttgtccgtt tcggaccgcc gccgttttga gccgcgatgc cgtctgaagc cttcagacgg
     6241 catttttgcc gcctttttca atattccgcc gaatgccaaa acggctgtcc gactgtcggc
     6301 gtgctggctt gcgctttgtc gcgtgcttcg accggtccgg cttcaaatgc cagccgtccg
     6361 gattcgacgg cgagtgcgaa ggcgcgtgcc atattgactg gatcgccgct gcgggaaacg
     6421 gcggtgttca aaagcacgcc gtcaaagccc cattccatca cttgtgccgc ctgtgagggc
     6481 aaacccaagc ccgcgtcgat aatcagcggc gtgtagggca ggcgttcgcg caggacgttc
     6541 aacgcgtagg cgtgaaccgc gcccaaaccc gtgccgatcg gggccgccca cggcatcaac
     6601 gcctgacagc ccgcgtcgag caggcggcgg caggcaatca ggtcttcggt gcaataaggc
     6661 agcactttga agccgtcttt aatcaggatt tccgccgctt cgacaagctg gaacacatcc
     6721 ggctgcaagg tgtcgtcatc tccgatgagt tccaatttta tccaatcggt ttcaaacact
     6781 tcgcgcgcca tttgcgccgt cgttaccgct tcctgcacgc tttggcagcc tgccgtgttc
     6841 ggcaggacgg gaacgccggt ttcttgaagc agcgaccaaa acccctgacc gtgcgcctcg
     6901 ccgccgcatc ccgcgcggcg cagcgagacg gtaatcatcg cgggccgggc ggttcggacg
     6961 gattgtttga ggatttcagg ggtcgggtag gcggctgtgc cgagcagcag ccgcgaaggg
     7021 aaagtttcgc tgtacagggt gagcataatg ggttcctttg tatagtggat taacaaaaac
     7081 cagtacggcg ttgcctcgtc ttagctcaaa ga
//
LOCUS       DAWITQ010000105         7091 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.105, whole genome shotgun sequence.
ACCESSION   DAWITQ010000105 DAWITQ010000000
VERSION     DAWITQ010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7091)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7091)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7091
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.105"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(242..317)
                     /locus_tag="WIX18_001554"
     tRNA            complement(242..317)
                     /locus_tag="WIX18_001554"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(282..284),aa:Lys,seq:ttt)
     gene            complement(386..1360)
                     /locus_tag="WIX18_001555"
     CDS             complement(386..1360)
                     /locus_tag="WIX18_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEZ5238643.1"
                     /translation="MTEYPGIGSPLFYGVFFAAVLVMIALDMFSLKKNGSHKVGVKEA
                     LAWSGLWVAVSCLFAGWLYFELAGNLGYGAAVAKEKVLEFFTGYILEKSLAVDNIFVF
                     LMIFGYFKVAPQFQHRVLLYGVLGALVLRTVMIFVGAALVQQFEWILYLFGAFLLYTG
                     IHMMKPEGDEKEDLANSRLLNAVKKVVPVGTEFHGEKFFTVENGKKIATPLFLVLVMI
                     ELSDVVFAVDSIPAVFAVTTDPFIVLTSNIFAILGLRAMYFLLADVAERFIFLKYGLA
                     FVLSFIGVKMLVMHWVHIPISVSLSVVFGALGASILTSLIYTKKQPDK"
     gene            complement(1393..1842)
                     /locus_tag="WIX18_001556"
     CDS             complement(1393..1842)
                     /locus_tag="WIX18_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family copper resistance protein"
                     /protein_id="HEZ5238644.1"
                     /translation="MSIYALAHIVHLYCAIAFVGGVFFEVLVLSVLHTGRVSCEARRE
                     VEKAMSYRAVRVMPFVVGLLFASGVVMAANRYLPILGEPFATSFGTMLTLKILLAFSV
                     LAHFAIAVVKMARSTLTVGWSKYIHAVVFTHMLLIVFLAKAMFYISW"
     gene            complement(1883..3154)
                     /gene="waaA"
                     /locus_tag="WIX18_001557"
     CDS             complement(1883..3154)
                     /gene="waaA"
                     /locus_tag="WIX18_001557"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HEZ5238645.1"
                     /translation="MFQWLYDVLWLLAPIWIRRYLDKRSGSAPAYRAHRGERFGKPYP
                     NPVTGAVWIHAVSVGETRAAQPLIRELRQRFPDAPLLMTQMTPTGRETAQVLFPDAQC
                     RYLPYDKKTWVRQFLREHRPMFGVLMETEIWPNLMTECRKSGVPLFLANARLSEKSLN
                     GYLKVRRLIRPAAASLTGCLAQTEADAARLAKLGAASVQVCGNTKYDLMPSEQMKTLA
                     GQFEKRIGGRPVAVCGSTRVYRGEDEAEKLLAAWQQYRGDALLVVVPRHPEHFQTAFE
                     TAKRFGFKVQRRSDGLPVEPDTQVWIGDSMGELYAYYLCADVAFVGGSLVDSGCQNII
                     EPLSCGVPTIFGFSTYNFSEACRHALASGAAVQVESADAWREAVEKTLSYEGGGMQMQ
                     ARVDGFIAQHRGAGARIAEAVREAVCGHRGR"
     gene            complement(3217..4665)
                     /gene="gnd"
                     /locus_tag="WIX18_001558"
     CDS             complement(3217..4665)
                     /gene="gnd"
                     /locus_tag="WIX18_001558"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019269816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating NADP(+)-dependent
                     phosphogluconate dehydrogenase"
                     /protein_id="HEZ5238646.1"
                     /translation="MKGDIGVIGLAVMGQNLILNMNDCGFKVVAYNRTIGKVDEFLNG
                     AAKGTDIVGAYSLQDLVDKLAKPRKIMMMVRAGSVVDDFIEQLLPLLDEEDIIIDGGN
                     ANYSDTTRRTHYLAGKGILFVGAGVSGGEEGARHGPSIMPGGDKRAWEAVKPIFQAIA
                     AKTPQGEPCCDWVGRDGAGHFVKMVHNGIEYGDMQLICEAYQFMKDGLGLSYDEMHRV
                     FAEWNKTELDSYLIEITAAILGYKDEGGEPLVEKILDTAGQKGTGKWTGINALDLGIP
                     LTLISEAVFARCVSSFKEQRVQTGKLFARTVTPVEGGKQEWVEALRQALLASKIISYA
                     QGFMLIREAGESYGWDLDYGNTALLWREGCIIRSAFLSNIRDAYENNPDLVFLGADPY
                     FKNILENCLPAWRKVVAKAVECGIPMPCMASAITFLDGYTTERLPANLLQAQRDYFGA
                     HTYERTDKPRGEFFHTNWTGKGGDTASTTYDI"
     gene            complement(5856..6779)
                     /locus_tag="WIX18_001559"
     CDS             complement(5856..6779)
                     /locus_tag="WIX18_001559"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HEZ5238647.1"
                     /translation="MLQRTLAKSISVTGVGLHSGERVALTLHPAPENSGISFRRTDLD
                     GEMGEQIKLTPYLINDTRLSSTIVTDKGVRVGTIEHIMSALSAYGIDNALIELNAPEI
                     PIMDGSSLPFIYLLQDAGVVDQKAQKRFLKILKPVEIKEAGKWVRFTPYDGFKVTLTI
                     EFDHPAFNRSSPTFEIDFAGKSYIDEIARARTFGFMHEVEMMRAHNLGLGGNLNNAIV
                     IDDTDVLNPEGLRYPDEFVRHKILDAIGDLYIVGHPIVGAFEGYKSGHAINNALLRAV
                     LADETAYDRVEFADSDDLPDAFHELNIRNCG"
BASE COUNT         1798 a         1923 c         1719 g         1651 t
ORIGIN      
        1 ttgagctaag gcgaggcaac gccgtactgg tttttgttaa tccactataa tatttcaatt
       61 ctcgggacaa cgcataaagc atcacccgat gaaggttgca gaggcggaat tataagggat
      121 tttcgggaaa aatacggaag ccgcaccaaa gaatttgacg aaatgccgcg ctttccgaac
      181 aaggattgtc ggaaaacaaa aaaagccgag ttttgaaaac tcagcttttt tttgttttat
      241 ctggtgggtc gtgagcgatt cgaacgctcg accaacggat taaaagtccg ctgctctacc
      301 ggctgagcta acgacccgac aagctcgaaa ttctatacat caagcctgat gctgtcaacc
      361 attttgtcgg cgttgagacg gcattttatt tatcaggctg ttttttcgta taaattaacg
      421 aggtcagtat cgatgcaccc aacgcgccga acacgaccga cagcgaaacg gaaatcggga
      481 tatgcaccca atgcattacc agcattttca caccgataaa actcaacacg aatgccaagc
      541 cgtatttcag gaagataaag cgttccgcca catccgccag caggaaatac atcgcccgca
      601 aacccaaaat agcgaaaata ttggaggtca gcacgataaa cggatcggtg gtaacagcaa
      661 agacggcggg aatactgtcc acggcaaaca cgacatcgct caattcaatc atgaccagca
      721 ccaaaaacag cggcgtggcg atttttttgc cgttttcgac ggtaaaaaat ttctcgccgt
      781 gaaattccgt gccgaccgga acgactttct tgacggcatt cagcagcctg ctgtttgcca
      841 aatcctcttt ctcatcgcct tcgggcttca tcatgtgtat accagtatag agcaggaacg
      901 cgccaaacag atacagaatc cactcaaact gctgaaccag tgccgcgccg acgaaaatca
      961 tgacagtgcg caataccaat gcgcccaata cgccgtacag cagcacgcgg tgctgaaact
     1021 gtggtgcgac tttgaagtag ccgaatatca tcaggaacac gaaaatattg tcgactgcca
     1081 acgatttttc caaaatgtag ccggtaaaga attccaatac tttttctttt gcgactgccg
     1141 cgccgtagcc gagattgccg gcgagttcga aatacagcca gcccgcgaac aggcaggata
     1201 cggcaaccca caagccgctc catgccaagg cttctttgac gccgacttta tggctgccgt
     1261 ttttcttcag cgaaaacata tccaaggcaa tcatgaccag cactgccgca aaaaaaacgc
     1321 cgtaaaacaa cggcgacccg atgccgggat attctgtcat ggttcaatct cctgatttga
     1381 aatgtagttg tgttaccagc tgatataaaa catcgctttt gccaaaaaga caatcagcag
     1441 catatgggta aagacgacgg cgtgtatgta tttcgaccag ccgaccgtca gtgtggaacg
     1501 cgccattttg acgacggcga tggcgaagtg cgccaacacg ctgaacgcca acaggatttt
     1561 cagcgtcagc atcgtaccga aggaagtggc aaacggttcg cccaatatag gaaggtagcg
     1621 gtttgccgcc atcacgacgc cgctggcgaa cagcaatccg accacaaacg gcatcaccct
     1681 gacggcgcgg taagacattg ccttttccac ttcgcgccgc gcctcgcacg acacccgtcc
     1741 cgtatgcagg acggacaaaa ccagcacttc aaaaaacacg ccgccgacaa aggcaatggc
     1801 gcaatacaga tggacgatgt gtgcaagtgc gtaaatactc atacggtact ccaaccggaa
     1861 aactcggatg cggattgtat cactatcgcc cccgatgtcc gcataccgct tcccgcaccg
     1921 cctcggcgat tctcgcgccc gctccgcgat gttgtgcgat aaagccgtcc acgcgcgcct
     1981 gcatctgcat tccgcccccc tcgtacgata aggttttttc aacggcttcc cgccacgcgt
     2041 ccgccgattc gacttgaacc gccgcacccg atgccaaggc gtgccggcag gcttcggaaa
     2101 aattgtaggt cgaaaagccg aatatcgtcg gaacgccgca ggaaagcggt tcgatgatgt
     2161 tctgacagcc cgaatcgacc agactgccgc cgacaaaagc aacatcggcg cacaggtaat
     2221 acgcatacag ctcgcccata ctgtcgccta tccacacctg cgtatcgggt tcgaccggca
     2281 aaccgtcgct gcgccgctga accttaaacc cgaagcgttt tgccgtttca aatgccgtct
     2341 gaaaatgctc gggatggcgc ggcacgacga ccagcagcgc atcgccgcga tattgttgcc
     2401 acgccgccag cagtttttcc gcctcgtctt cgccccgata aacgcgcgtg ctgccgcaca
     2461 cggcaaccgg ccggcctccg atgcgttttt caaactgccc cgccagcgtt ttcatctgtt
     2521 ccgacggcat caggtcgtat ttggtattgc cgcacacctg cacggatgcc gcgcccaatt
     2581 tcgccaaccg cgccgcatcc gcctccgtct gcgccagaca acccgtcagc gaagcggcgg
     2641 caggacggat caggcggcgg actttcagat aaccgttcaa cgatttttcc gacagccgcg
     2701 cattcgccaa aaacagcgga acgcccgatt tccggcactc cgtcatcaga ttgggccaga
     2761 tttcggtttc catcaatacg ccgaacatcg ggcggtgttc acgcaaaaac tgccgtaccc
     2821 acgttttttt gtcatacgga agatagcggc attgcgcatc gggaaacaga acttgcgcgg
     2881 tttcccgtcc cgtcggggtc atctgcgtca tcagcagcgg cgcatcggga aaacgctgcc
     2941 gcaactcgcg tatcaaaggt tgggcggcac gcgtttcccc gaccgaaacg gcgtgtatcc
     3001 aaaccgcgcc ggtaacggga ttcggatacg gcttgccgaa acgctcgccc cgatgcgccc
     3061 gatatgccgg ggcacttccg gagcgtttgt ccaaataacg ccgtatccat atcggcgcaa
     3121 gcagccacaa tacatcataa agccattgga acatctttct atttcctgca aaacaaatgc
     3181 cgtccgaacg gttcggacgg catttcggca acggaatcaa atatcgtagg ttgtcgaagc
     3241 ggtatctccg cccttgcccg tccagttggt atggaaaaac tcgccgcgcg gtttgtcggt
     3301 gcgttcgtaa gtgtgcgcgc cgaagtagtc gcgctgtgcc tgcaagaggt tggcaggcag
     3361 acgttcggtc gtgtagccgt ccaagaacgt aatcgccgaa gccatgcagg gcatagggat
     3421 gccgcattcg accgccttgg caaccacctt gcgccacgcc ggcaggcagt tttccaaaat
     3481 atttttgaaa tacggatccg cacccaagaa caccaaatcg ggattgtttt cataggcatc
     3541 gcggatattg cttaaaaatg cgctgcgaat gatgcatccc tcgcgccaca gcagcgcagt
     3601 gttgccgtag tccaaatccc agccgtagct ttcgcccgct tcgcggatca gcataaagcc
     3661 ttgtgcgtag gaaatgattt tggatgcaag cagggcctgt ctcaacgcct caacccattc
     3721 ttgtttgccg ccttcgacgg gcgtaacggt tcgggcgaac agcttgccgg tctgcacgcg
     3781 ctgttctttg aacgacgaaa cgcagcgggc gaataccgct tcggaaatca gcgtcaacgg
     3841 aatacccaaa tccaaggcat tgatgcccgt ccatttgccc gtgccttttt gccctgccgt
     3901 atcgaggatt ttctcgacca gcggttcgcc gccttcgtct ttatagccca aaattgccgc
     3961 tgtgatttca atcagataag aatccagctc ggttttgttc cactcggcaa acacgcggtg
     4021 catttcatcg taggacagtc ccaaaccgtc tttcatgaac tggtacgctt cgcaaatcaa
     4081 ctgcatatcg ccgtattcga tgccgttatg caccattttg acaaaatgcc ccgcgccgtc
     4141 cctgccgacc cagtcacaac acggttcgcc ctgcggcgtt ttggcggcaa tcgcctgaaa
     4201 aatcggtttg acggcttccc aagcgcgttt atccccgccc ggcataatgg acggcccgtg
     4261 ccgcgcgcct tcttcgccgc cggatacgcc cgcgccgaca aataaaatcc cttttccggc
     4321 aaggtaatgt gtccgccgtg tcgtgtcgga gtaattggca ttgccgccgt cgataatgat
     4381 gtcttcctcg tccaacaggg gcagcagttg ttcgataaag tcgtcgacga ccgaacctgc
     4441 gcgaaccatc atcatgattt ttctcggttt tgccagctta tcgaccaagt cttgcaggga
     4501 atacgcgccg acaatatccg ttcccttagc cgcgccgttt aaaaattcgt ccaccttacc
     4561 gattgttcgg ttgtaggcga caaccttaaa tccgcaatcg ttcatattca aaatcaggtt
     4621 ttgccccata accgccaaac cgattacgcc aatatcgcct ttcattgcag gaagctccgt
     4681 tatagattta atttatcgac cgcaactcta cctgatttac acttgtttaa caatccttaa
     4741 ctttttaatt ttttgaaaag atgcctttac gctttaccgt gcgtttccct gaaggcttat
     4801 aaataaaata taaaaattaa ataaaaaaac gatgattata ttgataggag aaattttctg
     4861 tgggtaactt ttttttattt taaaaatcat caggattacc tttttttagg gtgtcggtaa
     4921 ggcggattcc cttttgtgca tacctgtgga ttgtttttta tggggaataa gttttgtgga
     4981 tagtttgctt gttgtgcaga tggcatccta cttttcttta ccgaatggct gccgatgtct
     5041 ttaagaaccg gaatactgtg gaggtttgag aggaaagtgt gtttggaacg tgtggaaatg
     5101 gtcaggtgtc ggcacgaatg tcttatttct gcatatcggc agagtgcgca tccgaatttg
     5161 tgtataagtg gtggaaaaaa tgagatttgc gggtaaatct cacaatattt cagtcagata
     5221 actttggatt gcttgtgtat aaataaactt tcggatgggg atacgtaacg gaaacctgta
     5281 ccgcgtcatt cccacgaacc tacatcccgt cattcccacg aaagtgggaa tgacggcatc
     5341 agtctgccgt ttacagcacg gtttctttag attttatgtt ctagactccc gcctgcgcgg
     5401 gaatgacgaa tccatccata cggaaaccta caccacgtca ttcccacgaa cctacatccc
     5461 gtcattccca caaaaacaga aacctcaaat cccgtcattc ccgcctgcgc gggaatgacg
     5521 aaaatttaag ttttaggaat ttaccggaaa aaacagaaac cgctccgccg tcattcccac
     5581 ggaagtggga atctagaacg caaaatctca agaaaccgtt ttacccgata agtttctgca
     5641 ccgacagacc tagattcccg cttgcgcggg aatgacggct gcagatgccc gacggtcttt
     5701 atagtggact aacaaaaatc aggacaaggt aaggcaatgc cgtactggtt tttgttaatc
     5761 cactataaag tttcggatgg ggatacgtat ataaaaatgc cgtccggagc gggtatttta
     5821 tcgattcgga cggcatttgt ttggaaaagg gggcgttatc cacaatttct gatgttcagc
     5881 tcgtgaaatg cgtcgggcaa atcatcgctg tcggcaaatt ccacccggtc gtaagccgtt
     5941 tcgtctgcca aaaccgcgcg caagagtgcg ttgttgatgg cgtgtcccga tttgtagcct
     6001 tcaaatgcgc cgacaatcgg atgtccgacg atatacaaat caccgatggc atcaaggatt
     6061 ttgtggcgca caaactcatc gggatagcgc aagccttcag gattcaggac atccgtgtcg
     6121 tcaatcacga tggcgttgtt caaattgccg cccaaaccca gattgtgggc gcgcatcatt
     6181 tccacttcgt gcataaagcc gaaagtgcga gcgcgcgcga tttcgtcgat gtaggatttg
     6241 ccggcgaaat cgatttcaaa agtgggcgag ctgcggttga aagccggatg gtcgaattcg
     6301 atggtcagcg ttaccttaaa gccgtcatac ggcgtaaagc gcacccattt gcccgcttct
     6361 ttgatttcga caggcttgag gattttcaaa aaacgctttt gcgccttttg atcgaccacg
     6421 cccgcatctt gcaaaaggta aataaacggc aggctggagc cgtccataat cgggatttcg
     6481 ggtgcgttca gctcaatcag cgcgttgtcg ataccgtagg cggacagcgc ggacataatg
     6541 tgttcgatcg tgccgacgcg cacgcctttg tcggtaacga tggtggagga aaggcgggta
     6601 tcgttgatca aataaggggt cagcttgatt tgttcgccca tctcgccgtc caaatcggta
     6661 cggcggaagg aaatcccgct gttttcaggc gcggggtgca gggtcagtgc gacgcgttcg
     6721 cccgaatgca gcccgactcc ggtaacgctg atggatttcg ccaaagttct ttgcagcata
     6781 aaccgctccc ttatcaatgg ggtaagtttt ggaataatac gataaaaccg gaaaaacaag
     6841 ctatgttttt ccatagtatt tgccaatgta tccgttttca atacgtaagc cgcataaaaa
     6901 tgtatagtgg attaacaaaa atcaagacaa ggcgacgaag ccgcccctcc cgaaaaacgc
     6961 aaaaaatgcc gtccgaaaac ctttcggacg gcattttcgc gtgaaccgtc attcccacaa
     7021 ggacataaaa ccaaaacaga aaaccaaaat cagaaaccta aaattcgtca ttcccgcgca
     7081 ggcgggaatc t
//
LOCUS       DAWITQ010000106         7070 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.106, whole genome shotgun sequence.
ACCESSION   DAWITQ010000106 DAWITQ010000000
VERSION     DAWITQ010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7070)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7070)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7070
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.106"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            74..703
                     /locus_tag="WIX18_001560"
     CDS             74..703
                     /locus_tag="WIX18_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CadD family cadmium resistance transporter"
                     /protein_id="HEZ5238648.1"
                     /translation="MIQNVVTSIILYSGTAVDLLIILMLFFAKRKSRKDIINIYLGQF
                     LGSVSLILLSLLFAFVLDYIPSKEILGLLGLIPIFLGIKVLLLGDSDGEAIAKEGLRK
                     DNKNLIFLVAMITFASCDADNIGVFVPYFTTLNLANLIVALLTFLVMIYLLVFSAQKL
                     AQVPSVGETLEKYSRWFVAVVYLGLGVYILIENNSFDMLWTVSGQEKIL"
     gene            849..2525
                     /locus_tag="WIX18_001561"
     CDS             849..2525
                     /locus_tag="WIX18_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEZ5238649.1"
                     /translation="MLTYTPPDARPPAKTHEKPWLLLLMAFAWLWPGVFSHDLWNPAE
                     PAVYTAVEALAGSPTPLVAHLFGQTDFGIPPVYLWVAAAFKHLLSPWAADPYDAARFA
                     GVFFAVVGLTSCGFAGFNFLGRHHGRSVVLILIGCIGLIPTVHFLNPAAAAFAAAGLV
                     LHGYSLARRRVIAASFLLGTGWTLMSLAAAYPAAFALMLPLPVLMFFRPWQSRRLMLT
                     AVASLAFALPLMTVYPLLLAKTQPALFAQWLDDHVFGTFGGVRHVQTAFSLFYYLKNL
                     LWFALPALPLAVWTVCRTRLFSTDWGILGIVWMLAVLVLLAVNPQRFQDNLVWLLPPL
                     ALFGAAQLDSLRRGAAAFVNWFGIMAFGLFAVFLWTGFFAMNYGWPAKLAERAAYFSP
                     YYVPDIDPIPMAVAVLFTPLWLWAITRKNIRGRQAVTNWAAGVTLTWALLMTLFLPWL
                     DAAKSHAPVVRSMEASLSPELKRELSDGIECIDIGGGDLHTRIVWTQYGTLPHRVGDV
                     QCRYRIVRLPQNADASQGWQTVWQGARPRNKDSKFALIRKIGENILKTTD"
     gene            2627..3232
                     /locus_tag="WIX18_001562"
     CDS             2627..3232
                     /locus_tag="WIX18_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEZ5238650.1"
                     /translation="MMTLYSGITCPFSHRCRFVLYEKGMDFEIKDVDIYNKPEDLAVM
                     NPYNQVPVLVERDLVLHESNIINEYIDERFPHPQLMPGDPVMRGRGRLVLYRMEKELF
                     NHVQVLENPAATNKEQAKAREAIGNGLTMLAPSFSKSKYILGEDFSMIDVALAPLLWR
                     LDHYDVKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMRK"
     gene            3304..3696
                     /locus_tag="WIX18_001563"
     CDS             3304..3696
                     /locus_tag="WIX18_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HEZ5238651.1"
                     /translation="MPTSTKPYILRALCEWCSDNSLTPHILVWVNEHTRVPMQYVRDN
                     EIMLNIGATATQNLQIDNDWISFSARFGGQAHDIWIPVGHVLSLFARETGEGMGFELE
                     AYRPDTPPENTSAETAPRPAKKGLKLVK"
     gene            3701..3943
                     /locus_tag="WIX18_001564"
     CDS             3701..3943
                     /locus_tag="WIX18_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238652.1"
                     /translation="MPSERNRVSDGILSDGAQTESVYRQNPFRCIETVLPLPIRYWDV
                     IASALECNYGAANQAIERQRQRAAAVAVHERVAKFL"
     gene            complement(4021..4467)
                     /locus_tag="WIX18_001565"
     CDS             complement(4021..4467)
                     /locus_tag="WIX18_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HEZ5238653.1"
                     /translation="MSLKIRLTEDMKTAMRAKDQVSLGTIRLINAAVKQFEVDERTEA
                     DDAKITAILTKMVKQRKDSAKIYTEAGRQDLADKENAEIEVLHRYLPQMLSAGEIRTA
                     VDAAVAETGAAGMADMGKVMGVLKTRLAGKADMGEVNKILKAVLTA"
     gene            complement(4599..4811)
                     /locus_tag="WIX18_001566"
     CDS             complement(4599..4811)
                     /locus_tag="WIX18_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEZ5238654.1"
                     /translation="MPAIRVKENEPFEVAMRRFKRAVEKTGLLTELRAREAYEKPTTE
                     RKRKKAAAVKRLQKRLRSQQLPPKMY"
     gene            complement(5100..6950)
                     /locus_tag="WIX18_001567"
     CDS             complement(5100..6950)
                     /locus_tag="WIX18_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEZ5238655.1"
                     /translation="MYLPSMKHSLPLLATLVLAACSSTNTLPAGKTPADNIETADLSA
                     SVPTRPAEPEGKTLADYGGYPSALDAVKQKNDAAVAAYLENAGDSAMAENVRNEWLKS
                     LGARKQWTLFAQEYAKLEPAGRAQEVECYADSSRNDYTRAAELVKNTGKLPSGCTKLL
                     EQAAASGLLDGNDAWRRVRGLLAGRQTTDARNLAAALGSPFDGGTQGSREYALLNVIG
                     KEARKSPNAAALLSEMESGLSLEQRSFAWGVLGHYQSQNLNVPAALDYYGKVADRRQL
                     TDDQIEWYARAALRARRWDELASVISHMPEKLQKSPTWLYWLARSRAATGNTQEAEKL
                     YKQAAATGRNFYAVLAGEELGRKIDTRNNVPDADANSVLRMAEDGAIKRALVLFQNSR
                     TAGDAKMRRQAQAEWRFATRGFDEDKLLTAAQTAFDHGFYDMAVNSAERTDRKLNYTL
                     RYISPFKDTVIRHAQNVNVDPAWVYGLIRQESRFVIGAQSRVGAQGLMQVMPATAREI
                     AGKIGMDAAQLYTADGNIRMGTWYMADTKRRLQNNEVLATAGYNAGPGRARRWQADTP
                     LEGAVYAETIPFSETRDYVKKVMANAAYYASLFGAPHIPLKQRMGIVPAR"
BASE COUNT         1405 a         1889 c         1945 g         1831 t
ORIGIN      
        1 cggggttgaa gttgacatct acaaagttta atgtttgaat acattaaaaa aatatatttg
       61 aatgagatgt tttatgattc aaaatgttgt tacttcaata atcctgtatt ctgggacagc
      121 cgtagactta cttattatcc taatgttatt ttttgccaaa agaaaaagca gaaaagacat
      181 cattaacatc tatttaggac aatttctagg ctctgttagc ctgatattgc taagtttgct
      241 ttttgcattt gtcttagatt atattcctag taaagagatt ttaggtttgc tcggcttgat
      301 tccaattttc ctaggcatca aagttttgct gttaggagat tctgatggag aggctattgc
      361 caaagagggt ttgcgcaaag ataataaaaa cctgattttt ctagtcgcta tgattacttt
      421 tgcaagttgt gatgctgaca atattggtgt ctttgtccca tattttacta ccttaaattt
      481 agcgaatttg atagtggctt tacttacctt tctagtcatg atttatctct tggttttttc
      541 tgcccaaaaa ttagcacaag tcccttctgt tggagaaact ttggaaaaat atagcagatg
      601 gtttgttgct gttgtttatt tgggattggg ggtatatatc ctgattgaaa acaacagttt
      661 tgatatgcta tggactgtgt cgggccagga aaaaatatta tgaaaaagat agtatctgca
      721 aagactgcca tgtgcagtct tttttgttgc cggtcttttt gtgtctgatg ccgtctgaag
      781 cagtctctgc acgacctttg tgcgaatatt tgctacactt ggcaatccgt ccatttcttc
      841 tcacgcttat gctgacctac actccgcccg atgcccgccc gcccgccaaa acccacgaaa
      901 agccgtggct gctgctgttg atggcgtttg cctggttgtg gcccggcgtg ttttcccacg
      961 atttgtggaa tcctgccgaa cctgccgtct ataccgccgt cgaagcactg gcaggcagcc
     1021 ccaccccttt ggttgcccat ctgttcggtc aaaccgattt cggcataccg cccgtgtatc
     1081 tttgggttgc cgccgcgttc aaacatttgc tgtcgccgtg ggcagccgac ccgtatgatg
     1141 ccgcacgctt tgccggcgtg tttttcgccg ttgtcggact gacttcctgc ggctttgccg
     1201 gtttcaactt tttgggcaga caccacgggc gcagcgtcgt cctgattctc atcggctgta
     1261 tcgggctgat tccgaccgta cactttctca accccgctgc cgccgccttt gccgccgccg
     1321 gactggtgct gcacggttat tctttggctc gccggcgcgt gattgccgcc tcttttctgc
     1381 tcggtacggg ctggacgctg atgtcgttgg cagcagctta tccggcagca tttgccctga
     1441 tgctgccctt gcccgtactg atgtttttcc gtccgtggca aagcaggcgt ttgatgttga
     1501 cggcagtcgc ctcacttgcc tttgccctgc cgcttatgac cgtttacccg ctgctcttgg
     1561 caaaaacgca gcccgcgctg ttcgcgcaat ggctcgacga tcacgttttc ggtacgttcg
     1621 gcggcgtgcg gcacgttcag acggcattca gtttgtttta ctatctgaaa aacctgcttt
     1681 ggtttgcatt gcccgcgctg ccgctggcgg tttggacggt ttgccgcacg cgcctgtttt
     1741 cgaccgactg ggggattttg ggcattgtgt ggatgcttgc cgttttggtg ctgcttgccg
     1801 tcaatccgca gcgttttcag gataacctcg tctggctgct tccgccgctt gccctgttcg
     1861 gcgcggcgca actggacagc ctgaggcgcg gcgcggcggc gtttgtcaac tggttcggca
     1921 ttatggcgtt cggactgttt gccgtgttcc tgtggacggg ctttttcgcc atgaattacg
     1981 gctggcccgc caagcttgcc gaacgcgccg cctacttcag cccgtattat gttcctgata
     2041 tcgatcccat tccgatggcg gttgccgtac tgttcacacc cttgtggctg tgggcgatta
     2101 cccggaaaaa catacgcggc aggcaggcgg ttaccaactg ggcggcaggc gttaccctga
     2161 cctgggcttt gctgatgacg ctgttcctgc cgtggctgga cgcggcgaaa agccacgcgc
     2221 cggtcgtccg gagtatggag gcatcgcttt ccccggaatt aaaacgggag ctttcagacg
     2281 gcatcgagtg tatcgacata ggcggcggcg acctgcacac gcggattgtt tggacgcagt
     2341 acggcacatt gccgcaccgc gtcggcgatg tacaatgccg ctaccgtatc gtccgcttgc
     2401 cccaaaatgc ggatgcgtcg caaggctggc agacggtctg gcagggtgcg cgcccgcgca
     2461 acaaagacag taagttcgca ctgatacgga aaatcgggga aaatatatta aaaacaacag
     2521 attgagccga atgtctggat taagtgccgg aaatcgcgta taattgcgcg attaaacctt
     2581 tataaatcag ccgttttgca ggcatcacac aggagcgaca attattatga tgaccctcta
     2641 ttccggcatt acctgcccct tcagccaccg ctgccgcttc gttttgtacg aaaaaggtat
     2701 ggattttgaa atcaaagacg tcgatattta caacaaaccc gaagacctcg ccgtcatgaa
     2761 tccgtataac caagttcccg tgctggtcga gcgcgatttg gtgctgcacg agtccaacat
     2821 catcaacgaa tacatcgacg aacgcttccc tcatccgcag cttatgcccg gcgatcccgt
     2881 tatgcgcggc cggggccggc tggtgctgta ccgtatggaa aaagaattgt tcaaccacgt
     2941 ccaagtgtta gaaaaccccg ccgccaccaa caaggaacag gcaaaagcgc gcgaagccat
     3001 cggcaacggt ctgaccatgc ttgccccttc gttcagcaaa agcaaataca tcctcggcga
     3061 agatttttct atgattgatg tcgcccttgc tccgctgctg tggcggctcg accactacga
     3121 tgtcaaactg ggcaaaagtg ccgcgccgct gctcaaatac gccgagcgca tcttccagcg
     3181 cgaagccttt atcgaagcac tgacacccgc cgaaaaagcc atgcgcaaat aagcccggaa
     3241 tgcttgcaaa acccgccgtt ttgtaggcat tttcacattc aggcacacca cacggaaccc
     3301 attatgccca cttccaccaa accctacatc ctccgcgcac tttgcgaatg gtgcagcgat
     3361 aacagcctca cgccgcacat tcttgtctgg gtcaacgaac acacgcgtgt ccccatgcag
     3421 tacgtccgcg acaacgaaat tatgctcaac atcggcgcga ccgccacgca aaaccttcaa
     3481 atcgacaacg attggatcag cttttccgcc cgcttcggcg gacaggcgca cgacatatgg
     3541 atacctgtcg gacacgtcct cagccttttc gcacgggaga ccggcgaagg tatggggttt
     3601 gaattggaag cgtatcgccc cgacacgccg cctgaaaaca cctctgccga aaccgcgccc
     3661 cggcccgcca aaaaaggctt gaaattggtc aaataaatct atgccgtctg aacggaatcg
     3721 tgtttcagac ggcattttgt ccgatggggc gcaaacggaa tccgtttatc ggcaaaaccc
     3781 gtttcggtgt atcgaaaccg tgttgcccct gccgattcga tattgggacg ttattgcatc
     3841 agcattagag tgcaattatg gtgcagctaa ccaagcgata gagcggcaac gccaacgagc
     3901 agcggcagtt gctgtgcatg agcgtgttgc aaaattttta taaatatcat caaaccatga
     3961 aaatgccgtc tgaacctgcg atacgggctt cagacggcat tttgtccgat attcgggcaa
     4021 tcaggcggtc agcacggctt tcaggatttt gttgacttcg cccatatcgg ctttgccggc
     4081 gaggcgggtt ttcaatacgc ccatcacttt gcccatatcc gccatacctg ccgcgccggt
     4141 ttcggcaacg gcggcatcga ccgcagtacg gatttccccg gcggagagca tttggggaag
     4201 gtagcggtgc agtacctcga tttcggcgtt ttctttgtct gccaaatcct gacggccggc
     4261 ttcagtgtag attttcgcgc tgtcttttcg ctgtttgacc attttggtca ggatggcggt
     4321 gattttggca tcgtcggctt cggtgcgttc gtccacttca aactgtttga cggcggcgtt
     4381 gatgaggcgg atggtgccga gggaaacttg gtctttggcg cgcatcgcgg ttttcatgtc
     4441 ttcggtaagg cggattttca ggctcatgat gtcctcgctg ggatgtcgga tggaaacggc
     4501 gggtttcgat gccgtctgaa aagcaaaaca caccgcagag caggtcttgc ggtgtgtcct
     4561 catatcacag ggctgacctg taatctgtac ttgaacgttt agtacatttt gggcggcagt
     4621 tgttggctgc gcaggcgttt ttgcaggcgt tttacggctg ccgctttttt gcgtttgcgt
     4681 tcggtagtcg gtttttcgta ggcttcgcgg gcgcgcagct cggtcagcag gccggttttt
     4741 tctacggcgc gtttgaaacg gcgcatagcg acttcaaatg gttcattctc ttttacgcgg
     4801 attgcaggca ttttatttcc tttaataaat tcggttgttt catctgccca tcatatcggt
     4861 ggaaagggta gggcagacgg tgttgaaggt ttaccgtatc gctgtgcctt gcggcggcgg
     4921 gatacgcgcc gtgacggaaa catcacctcc taacgggtcg gcttgtgccg tgtcaagctg
     4981 cttgaaaaag caggaaaaac aattttcgga ttgtcttata tttatggttc gccgtcaatg
     5041 ccgttcggga taaaaatgcc gtctgaaaga ccgggcgggt ttcagacggc atcggtacgt
     5101 cagcgggcgg ggacaatgcc catacgctgt ttgagcggga tgtgcggcgc gccgaagagg
     5161 gaggcgtagt aggcggcatt ggccatcact tttttgacat agtcgcgcgt ttcggaaaac
     5221 gggatggttt cggcatatac cgcgccttcg aggggcgtgt ccgcctgcca tcggcgcgcc
     5281 ctgccgggac cggcgttata gcctgcggtg gcgaggactt cgttgttttg caggcggcgt
     5341 ttggtgtccg ccatatacca cgtccccata cggatattgc cgtcggcggt gtaaagttgt
     5401 gcggcatcca taccgatttt gccggcgatt tcgcgcgcgg tggcaggcat aacctgcatc
     5461 agcccctgcg cgcctacgcg ggattgcgcg cctataacga agcggctttc ctgacgaatc
     5521 aggccgtaaa cccaagccgg atcgacatta acattttgcg cgtggcggat taccgtgtct
     5581 ttaaacggcg aaatatagcg caaggtgtag ttgagtttgc ggtcggtgcg ttccgcgctg
     5641 ttgaccgcca tatcgtaaaa accgtggtcg aacgcggttt gtgcggcggt cagcagcttg
     5701 tcttcgtcga acccgcgtgt ggcaaaacgc cattccgcct gagcctgacg gcgcattttc
     5761 gcatcgccgg cggtccggct gttttggaac agtaccagcg cacgcttaat cgcgccgtct
     5821 tccgccatac ggaggacgct gtttgcgtcg gcatcgggaa cattgttgcg cgtatcgatt
     5881 ttgcgcccca actcttcccc tgccagcacc gcataaaaat tcctgcccgt cgctgccgcc
     5941 tgtttgtaaa gtttttccgc ctcttgcgtg ttgcccgttg cggcgcggct gcgtgccagc
     6001 cagtagagcc aggtcgggct tttttgcagt ttttcgggca tatgcgagat aacggaggcc
     6061 agctcgtccc aacgtcgggc gcgcaaggcg gcgcgggcgt accactcgat ttggtcgtcg
     6121 gtcagttggc ggcggtcggc aaccttgccg taatagtcca aggcggcagg cacattgagg
     6181 ttttgcgact gataatgccc caatacgccc cacgcgaaac tgcgttgttc gaggcttaaa
     6241 ccgctttcca tttcggacag cagggcggcg gcattcggcg atttgcgtgc ttctttgccg
     6301 atgacgttca acagggcata ttcgcgcgaa ccttgtgtac cgccgtcaaa cgggctgccc
     6361 aatgcggcgg caaggttgcg tgcgtctgtg gtttggcggc cggccagcag tccgcgcacg
     6421 cgtctccagg cgtcgttgcc gtccaacaag ccggatgcgg ctgcctgttc caacagtttg
     6481 gtgcagcccg aaggcagttt gcccgtattt ttgaccagtt cggcggcacg cgtatagtcg
     6541 ttgcggctcg aatcggcgta gcattcgact tcttgggcgc gccctgccgg ttcgagtttg
     6601 gcatattcct gtgcaaacag cgtccactgt ttgcgtgcgc ccaaagactt cagccactcg
     6661 ttgcggacat tttccgccat cgcactgtcg ccggcgtttt ccaaataggc ggcgacggcg
     6721 gcatcgtttt tctgtttcac tgcatccagt gcggacgggt agccgccgta atctgccagc
     6781 gtttttcctt ccggttcggc agggcgggtg ggaacgcttg ccgaaaggtc ggcagtttct
     6841 atattgtctg ccggggtctt gccggctggc agtgtgtttg tcgaagaaca cgcggcaagc
     6901 actagggtcg ccagcagcgg cagggaatgc ttcatagagg gtaggtacat cggatttcct
     6961 taagaatcgg aaccctgaac ggtcagggtt ggaaaagaca aaatgccgtc tgaacaggcg
     7021 tttgcccgaa ttatatgccg aaactgcacc gcctttggaa tgtttccgac
//
LOCUS       DAWITQ010000107         7046 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.107, whole genome shotgun sequence.
ACCESSION   DAWITQ010000107 DAWITQ010000000
VERSION     DAWITQ010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7046)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7046)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7046
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.107"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..368)
                     /locus_tag="WIX18_001568"
     CDS             complement(<1..368)
                     /locus_tag="WIX18_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEZ5238656.1"
                     /translation="MGSNAWLFWALASAGFASLTAIFAKMGLQGIDSDFATFIRTLVI
                     LAALLLFLTYTGKWQGVNGFTGHNWTFLILSGLATGASWLAYFKALQLGNASQVAPVD
                     KFSLVLVALMAVVFLDERPNT"
     gene            543..2219
                     /locus_tag="WIX18_001569"
     CDS             543..2219
                     /locus_tag="WIX18_001569"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HEZ5238657.1"
                     /translation="MSFKTDAEIAQSSTMRPIGEIAAKLGLNADNIEPYGHYKAKINP
                     AEAFKLPQKQGRLILVTAINPTPAGEGKTTVTIGLADALRHIGKDAVIALREPSLGPV
                     FGVKGGAAGGGYAQVLPMEDINLHFTGDFHAIGAANNLLAAMLDNHIYQGNELNIDPK
                     RVLWRRVVDMNDRQLRNIIDGMGKPVDGVMRPDGFDITVASEVMAVFCLAKDISDLKE
                     RLGNILVAYAKDGSPVYAKDLKAHGAMAALLKDAIKPNLVQTIEGTPAFVHGGPFANI
                     AHGCNSVTATRLAKHLADYAVTEAGFGADLGAEKFCDIKCRLADLKPDAAVVVATVRA
                     LKYNGGVERANLGEENLDALAKGLPNLLKHISNLKNVFGLPIVVALNRFVSDSDAELA
                     MIEKACAEHGVEVSLTEVWGKGGAGGADLAHKVVNAIENQPNNFNFAYDVELGIKDKI
                     RAIAQKVYGAEDVDFSAEASAEIASLEKLGLDKMPICMAKTQYSLSDNAKLLGCPEGF
                     RIAVRGITVSAGAGFIVALCGNMMKMPGLPKVPAAEKIDVDEHGVIHGLF"
     gene            2333..3424
                     /gene="ychF"
                     /locus_tag="WIX18_001570"
     CDS             2333..3424
                     /gene="ychF"
                     /locus_tag="WIX18_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002642527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HEZ5238658.1"
                     /translation="MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIV
                     EVPDPRMAELAKIVNPQKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVN
                     VVRCFDDDNIVHVAGRVDPIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQK
                     LVDLCKKLLPHLDEGKPVRSFGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPH
                     LERLKELAAKENAPVVAVCAAMESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDL
                     LGLQTYFTAGVKEVRAWTIHKGDTAPQAAGVIHTDFERGFIRAQVISYEDFIALGGEA
                     KAKEAGKMRVEGKEYVVQDGDVMHFLFNV"
     gene            3462..3668
                     /locus_tag="WIX18_001571"
                     /pseudo
     CDS             3462..3668
                     /locus_tag="WIX18_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010950985.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            3684..3788
                     /locus_tag="WIX18_001572"
                     /pseudo
     CDS             3684..3788
                     /locus_tag="WIX18_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            3888..5678
                     /locus_tag="WIX18_001573"
     CDS             3888..5678
                     /locus_tag="WIX18_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEZ5238659.1"
                     /translation="MAAGRISRCRYILCDFRLFDDGDPPSRNVGGGGRFSLKAFYIRR
                     IKRILPAFFAVLAATLAGGFFLFTKDDFFLLWKSALTALGFASNLYFARGKDYFDPAQ
                     EEKPLLHIWSLSVEEQFYFVFPILLLLVARKSLRVQFGFLAALCALSLAASFIPSALD
                     KYYLPHLRACEMLVGSLTAVWMRYRQQRNLAVGRCCAAAGALFSACILSACLFAYSEQ
                     TAYFPGPAALIPCLAVAALIYFNHYEHPLKKFFQWKITVAAGLISYSLYLWHWPILAF
                     MRYIGPDNLPPYSPAAAVVLILLLSLFSYHCIEKPFKKWQGSFAQSVLWIYALPMLIL
                     GAGSFFAMRLPFMAQYDRLGLTRSNTSCHNNTGKQCLWGDTEKQPELLVLGDSHADHY
                     KTFFDAVGKKEKWAATMVSADACAYVEGYASRVFQNWAACRAVYRYAEEHLPRYSKVV
                     LAMRWGSQMPENSRSLAYDAGFFQKFDRMLHKLSSEKQAVYLMADNLASSYNVQRAYI
                     LSSRIPGYRQTLRPDDESTLKANARIRELAAKYPNVYIIDAAAYIPADFQIGGLPVYS
                     DTDHINPYGGTELAKRFSEKQRFLNTRHNH"
     gene            5740..7035
                     /gene="tyrS"
                     /locus_tag="WIX18_001574"
     CDS             5740..7035
                     /gene="tyrS"
                     /locus_tag="WIX18_001574"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEZ5238660.1"
                     /translation="MSVIQDLQSRDLIAQTTDIEALDALLNEQKIALYCGFDPTADSL
                     HIGHLLPVLALRRFQQAGHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIR
                     NQLTPFLSFEGGNAAIMANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRD
                     GAGISFTEFAYSLLQGYDFAELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFG
                     LTLPLVTKSDGTKFGKTEGGAVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSI
                     EEIDAVEAKDKASGSKPEAQRILAEEMTRLIHGEEALAAAQRISESLFAEDQSSLTES
                     DFEQLALDGLPAFEVSDGINVVEALVKTGLASSNKEARGFVNSKAVLLNGKPAEANNP
                     NHAAERPDDACLLTDEHKRFGKYTILRRGKRNHALLVWK"
BASE COUNT         1675 a         2017 c         1804 g         1550 t
ORIGIN      
        1 gtgttcgggc gttcgtccaa gaaaaccacc gccatcagcg cgaccagaac caggctgaat
       61 ttatcgacgg gggcgacttg cgaggcgtta cccagttgca gggctttgaa gtaggcaagc
      121 caagatgcgc cggtagcaag gccggatagg ataaggaatg tccagttgtg ccccgtaaag
      181 ccgttcacgc cctgccattt gccggtgtag gttaaaaaca ataacaaagc ggcgaggatg
      241 accaaggtgc ggatgaaggt agcgaaatcc gaatctatgc cctgcaagcc cattttggcg
      301 aaaatagcgg tcaatgaggc gaagcctgcc gatgccaatg cccaaaacag ccatgcgttg
      361 ctgcccatgt tttctccttg gattgtgaac aatatgaacg gtatttttgt tgcagcgtca
      421 aaaatttcac tgcgggtttg gtgcggataa cgttataata tgcctgatat tattttcaat
      481 ccacctgttt gtcgcctgat gctttcagac ggcatgtccc tcctcatttc taaaggaaaa
      541 tcatgagctt caaaaccgat gccgaaatcg cccaatcctc caccatgcgc ccgattggcg
      601 aaattgccgc caagctgggt ctgaatgccg acaacattga gccttacggt cattacaagg
      661 cgaaaatcaa tcctgccgaa gcgttcaaac tgccgcaaaa acagggcagg ctgattttgg
      721 ttaccgccat taatccgact ccggcgggcg aaggcaaaac caccgtaacc atcggtttgg
      781 cggacgcgtt gcgccacatc ggcaaagatg ccgtgattgc cctgcgcgaa ccttctctgg
      841 ggccggtgtt cggcgtgaaa ggcggcgcgg caggcggcgg ctatgcccaa gttttgccga
      901 tggaagacat caatctgcac tttaccggcg acttccacgc catcggtgcg gcgaataacc
      961 tgctcgccgc catgctcgat aaccatatct accaaggcaa cgagttgaac atcgatccga
     1021 aacgcgtgct gtggcggcgc gtggtcgata tgaacgaccg ccagttgcgc aacatcatcg
     1081 acggcatggg caaacctgtt gacggcgtga tgcgtcctga cggtttcgac attaccgttg
     1141 cttccgaagt gatggcggta ttctgccttg ccaaagacat cagcgatttg aaagagcgtt
     1201 tgggcaacat ccttgtcgcc tacgccaaag acggcagccc cgtttacgcc aaagatttga
     1261 aagcacacgg cgcgatggcg gccctgctca aagatgcgat taagcccaac ttggtacaaa
     1321 ccatcgaagg cactccggcc ttcgtacacg gcggcccgtt cgccaacatc gcccacggct
     1381 gcaactccgt aaccgcaacc cgtctggcga aacaccttgc cgactacgcc gtaaccgaag
     1441 caggcttcgg cgcggatttg ggtgcggaaa aattctgcga tatcaaatgc cgtctggcgg
     1501 atttaaaacc tgatgcggct gttgtcgtgg ctactgtccg cgctttgaaa tacaacggcg
     1561 gcgtggaacg cgccaacctc ggcgaagaaa atttagacgc tttggcaaaa ggtctgccta
     1621 atctgctgaa acacatttcc aacctgaaaa acgtattcgg actgcccatc gtcgttgcgc
     1681 tcaaccgctt cgtgtccgac tccgatgccg agttggcgat gattgaaaaa gcctgtgcgg
     1741 aacacggcgt tgaagtttcc ctgaccgaag tatggggcaa aggcggcgcg ggtggtgcag
     1801 acttggcgca caaagtcgtt aacgccatcg aaaaccaacc gaacaacttc aattttgcct
     1861 acgatgtcga gttgggcatc aaagacaaaa tccgtgcgat tgcccaaaaa gtgtacggcg
     1921 cggaagatgt tgatttcagc gcggaagcgt ctgccgaaat cgcttcactg gaaaaactgg
     1981 gcttggacaa aatgccgatc tgcatggcga aaactcaata ctctttgagt gacaacgcca
     2041 aactgttggg ctgccccgaa ggcttccgca tcgccgtgcg cggcatcacc gtttccgccg
     2101 gcgcgggctt catcgtcgcg ctgtgcggca atatgatgaa gatgccgggt ctgccgaaag
     2161 ttccggccgc cgagaaaatc gatgtggacg aacacggcgt gattcacggc ttgttctgaa
     2221 cggtttttga aaccggatgc cgtctgaagc cgtttcagac ggcatttttt cggaacgcgg
     2281 gcggcggtat gctataatcc gccgttaaat ttctctattt tcaggaaaaa acatgagttt
     2341 gaaatgcggc atcgtcggtt tgcccaacgt cggcaaatcc accctcttta acgcgctgac
     2401 ccaatcgggt atcgaagcgg caaactatcc tttctgtacc atcgaaccca acgtcggcat
     2461 cgtcgaagtg cccgacccgc gtatggctga attggcaaaa atcgtcaatc cgcaaaaaat
     2521 gcagcctgcc atcgtcgaat ttgtcgatat cgccggtttg gttgcaggcg cgagcaaagg
     2581 cgaaggtctg ggcaaccagt tccttgccaa catccgcgag actgacgcga ttgttaacgt
     2641 cgtacgctgc tttgacgacg acaacatcgt ccacgttgca ggccgtgtcg atccgattgc
     2701 cgacatcgaa accatcggta cagagttggc gcttgccgac ttggcaagtg tggaaaaagc
     2761 catcgtccgc gaagaaaaac gcgcccgttc aggcgacaaa gacgcgcaaa agctggtcga
     2821 tttgtgcaaa aaactgctgc cgcatctaga cgaaggcaaa cccgtgcgtt ccttcggttt
     2881 ggacgcggaa gaacgcgcga tgctcaaacc gctgttcctg ctgaccgcca aaccggcgat
     2941 gtatgtgggc aacgtcgccg aagacggttt tgaaaacaat ccgcacctcg aacgcctgaa
     3001 agaattggcg gcaaaagaaa acgcccccgt cgtcgccgtt tgcgccgcaa tggaaagcga
     3061 aatcgccgaa ttggaagacg acgaaaaagc cgagttcctc gccgaaatgg gcttggaaga
     3121 accgggcctg aaccgcctga tccgcgcggg ctacgacctc ttaggcctgc aaacctactt
     3181 caccgccggc gtgaaagaag tccgcgcttg gaccatccac aaaggcgaca ccgccccgca
     3241 agccgccggc gtgattcaca ccgactttga acgtggcttc atccgcgccc aagttatctc
     3301 ctacgaagac ttcatcgctt taggcggcga agccaaagcc aaagaagccg gcaaaatgcg
     3361 tgtggaaggc aaagaatacg tcgtgcagga tggggatgtg atgcactttt tgtttaacgt
     3421 gtaacccaaa tgcggcaggt tttcagacgg ctttgccaga aatgccgtct gaagccggtt
     3481 ttggtggttt tcggcgtttc cataccgccg gaatgcggct gcatcaaaat aaaatcccgt
     3541 ccgcatttcc gatttgccct ccccgattcc tgcaaaacaa accgcctgcc ccgctgttgc
     3601 aaaaagccgt ccggcattcc gaatatcccg agccccgata caaaatgacc tttcagacgg
     3661 catttgcgcc gccgcgtttc gagtatagtg gattaacttt aaatcaggac aaggcgacga
     3721 aaccgcagac agtacagata gtacggcaag gcgaggcaac gccgtactgg tttaaattta
     3781 atccactata aaaacattat gagccaagcc ttaccctacc gcccggacat cgacacattg
     3841 cgcgccgccg ccgttttgtc cgtcatcgtg ttccatatcg aaaaaaattg gctgccgggc
     3901 ggatttctcg gtgtcgatat attctttgtg atttcaggct ttttgatgac ggagatcctc
     3961 cttcgcgaaa tgtcgggggg ggggggaggt tttccctgaa ggcattttat atccgccgca
     4021 tcaagcggat tctgcccgca tttttcgccg tattggcggc aacgctggca ggcggcttct
     4081 ttttattcac caaagatgat ttctttcttt tgtggaaatc cgcgctgacc gccttgggtt
     4141 tcgcctctaa cctgtatttt gcaaggggga aggattattt cgatcccgcg caggaagaaa
     4201 agcccctgct gcacatctgg tctttgtcgg tcgaagaaca attttacttt gtctttccga
     4261 tactgctgct gcttgtcgcc cgcaaaagcc tgcgcgtaca gttcggcttc cttgccgcac
     4321 tgtgtgcctt aagccttgcc gcctccttta taccttccgc gctcgataaa tattacctgc
     4381 cccacctgcg cgcctgcgaa atgctggtcg gatcgctgac cgccgtgtgg atgcggtacc
     4441 ggcaacagcg gaatctcgcc gtcggcagat gctgtgccgc cgccggcgca ttgttttccg
     4501 cgtgcatact gtccgcctgc ctgtttgcct attcggaaca aaccgcctat ttcccagggc
     4561 ccgccgcttt gattccctgt ctggctgttg ccgcgctgat ttatttcaat cattacgaac
     4621 acccgcttaa aaaatttttc caatggaaaa tcaccgttgc cgccggtttg atttcctatt
     4681 cgctttatct gtggcattgg ccgatattgg cctttatgcg ctatatcggc ccggacaacc
     4741 tgccgcctta ttcgccggcg gcggcggtcg tcctgatatt gctgctttcc ctgttttctt
     4801 accactgcat cgaaaaaccg tttaaaaaat ggcaaggttc gttcgcacaa tccgttttat
     4861 ggatttatgc cttgcctatg ctcattttgg gggcgggctc attttttgcg atgaggctgc
     4921 cgtttatggc gcaatacgac cgcttggggc tgacgcgttc caacacctcc tgccacaaca
     4981 ataccggcaa acaatgccta tggggggata cggaaaaaca gccggaactg ctggttttgg
     5041 gcgactccca cgccgaccat tacaaaacat tcttcgatgc cgtgggcaaa aaagaaaaat
     5101 gggctgccac tatggtttcc gccgacgctt gcgcctatgt ggaaggctac gcgtcccgcg
     5161 tgttccaaaa ctgggccgcc tgccgcgccg tttaccgcta tgccgaagaa cacctgcccc
     5221 ggtattcaaa agtggttttg gcgatgcgct ggggcagcca gatgcccgaa aacagccgct
     5281 cccttgccta cgatgccggt tttttccaaa aattcgaccg tatgctgcac aaactctcat
     5341 ccgaaaaaca agccgtttac ctgatggcgg acaaccttgc ctcgtcttac aacgtccagc
     5401 gcgcctatat cttgtcttca cgcataccgg gttaccgcca aaccctgcgc ccggacgacg
     5461 aaagcaccct gaaagccaat gcacgcatca gggaattggc agccaaatac cccaacgtct
     5521 atattattga tgccgccgcc tatatccccg cagattttca aatcggcgga ttgccggttt
     5581 actcggacac agaccacatc aacccttacg gcggcacgga attggcaaag cgtttttccg
     5641 aaaaacaacg gtttctcaat acgcgccata accattgatt cgcttaaatt tgttacaatc
     5701 ggcggtttgc aaaaacgcta atttttttga aagagaccga tgagcgtcat ccaagacctg
     5761 caatcgcgcg accttatcgc gcaaacgacc gacatcgaag ccttagacgc tttgttgaac
     5821 gaacaaaaaa tcgcccttta ctgcggtttc gatccgaccg ccgacagcct gcacatcgga
     5881 cacctgctgc ccgtattggc attgcgccgc ttccaacagg cggggcatac gccgattgct
     5941 ttggtgggcg gcgcgaccgg tatgatcggc gaccccagct tcaaagccgc cgaacgcagc
     6001 ttgaattccg ccgaaactgt tgccggctgg gtggaaagta tccgcaacca attaacccct
     6061 ttcttgagct ttgaaggcgg aaatgccgcc attatggcga acaatgccga ctggttcggc
     6121 agcatgaact gccttgactt cctgcgcgac atcggcaagc atttctccgt caacgccatg
     6181 ctgaacaaag aatccgtcaa acagcgcatt gaccgcgacg gcgcaggcat ttccttcacc
     6241 gagttcgcct actccctgct gcaaggctac gacttcgccg agttgaacaa acgccacggc
     6301 gcggttttgg aaatcggcgg ctccgaccaa tggggcaaca tcaccgccgg tatcgacctg
     6361 acccgccgcc tgaatcaaaa acaagtgttc ggcctgaccc tgcctttggt taccaaatca
     6421 gacggcacca aattcggcaa aaccgaaggc ggcgcagtat ggctgaacgc gaaaaaaacc
     6481 tcgccctatc agttctacca attctggctg aaagtcgccg atgccgatgt gtataaattc
     6541 ctgaaatact ttaccttcct gtccatcgaa gaaatcgatg ccgtcgaagc gaaagacaag
     6601 gcaagcggca gcaagcccga agcgcaacgc atcctcgccg aagaaatgac ccgcctgatt
     6661 cacggcgaag aagcccttgc cgccgcgcag cgcatttccg aaagcctgtt tgccgaagac
     6721 caaagcagcc tgaccgaaag cgacttcgag cagctcgccc tcgacggcct gcctgcattt
     6781 gaagtttcag acggcatcaa tgtcgtcgaa gccttggtca aaaccggttt ggcatcctcc
     6841 aataaagaag cgcgcggctt tgtgaacagc aaagcggttt tgctcaacgg caaacctgcc
     6901 gaagccaaca accccaacca cgccgccgaa cgccccgacg atgcctgcct gctgaccgac
     6961 gaacacaaac gtttcggcaa atacaccatc cttcggcgcg gcaaacgcaa tcacgcgctt
     7021 ttggtttgga aataatccga ttgccg
//
LOCUS       DAWITQ010000108         7005 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.108, whole genome shotgun sequence.
ACCESSION   DAWITQ010000108 DAWITQ010000000
VERSION     DAWITQ010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7005)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7005)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7005
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.108"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(75..1496)
                     /locus_tag="WIX18_001575"
     CDS             complement(75..1496)
                     /locus_tag="WIX18_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HEZ5238661.1"
                     /translation="MRHLPLFSLMLFPASVYAADLDGANLNLLWSLPFALILLSIALG
                     PLFFSHTWHHHYGKITAFWTLLFLIPFSLVFGASAGIHTVAHALVEEYIPFILLLLAL
                     YTISGGILVWGDLNGTPKLNTALLAVGTALASIMGTTGAAMLMIRPLLKANQNRTRRV
                     HIVIFFIFLVANIGGGLTPLGDPPLFLGFLKGVDFMWTVKHMFAPVLISTAVLLTAFY
                     FIDNRFFKQESIAQDTPAQQEKPEKIAIFGKWNFLLLSGVVGAVLMSGLWKPEHPGFE
                     ILGSRYALQNLVRDVILIALTAVSMAITPKQVRAGNEFNFEPIAEVGKLFLGIFITIF
                     PVLSILKAGEAGALGGVVSLVHDTAGHPINVMYFWMSGILSAFLDNAPTYLVFFNMAG
                     GDAQALMTGTLFHSLLAVSMGSVFMGALTYIGNAPNFMVKAIAEQRGVPMPTFFGYMM
                     WSVAFLTPVFIVHTLIFFVFKLL"
     gene            complement(1854..2213)
                     /locus_tag="WIX18_001576"
     CDS             complement(1854..2213)
                     /locus_tag="WIX18_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HEZ5238662.1"
                     /translation="MIRYLLIACGCISLLLGIIGIFLPLLPTTPFVLLSAACWAKASP
                     RFHRWLHRHRYFGPMVHNWEQNGAVPRKAKIFAISMMTASCLIMFWQFPQRWWVGAVS
                     SVFCSLVAIWMWRRPES"
     gene            complement(2210..2815)
                     /locus_tag="WIX18_001577"
     CDS             complement(2210..2815)
                     /locus_tag="WIX18_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1415 domain-containing protein"
                     /protein_id="HEZ5238663.1"
                     /translation="MTIMNINTSENKDAVAEHTGQWLEKAVIGLNLCPFAKAPHVKNL
                     VRIAISEAKHLDSFLEDLDEELQRLGNTPATELETTLLVHPTLFPDFDVFNDMLDIAD
                     AAVIENGLEGIVQIAPFHPQFRFQNTEPDDIGNYTNRSPYPTLHLIREDSIAKAAQAF
                     PDTSAIFERNIALLEKMGHEGWAKLGITSCPYPHNKKNISK"
     gene            complement(2862..3344)
                     /locus_tag="WIX18_001578"
     CDS             complement(2862..3344)
                     /locus_tag="WIX18_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEZ5238664.1"
                     /translation="MPQLTLDKTDIKILQVLQENGRLTNVELSERVALSPSPCLRRLK
                     QLEDAGIVRQYAALLSPESVNLGLQAFIRVSIRKAKDAREDFAASVRKWPEVLSCFAL
                     TGETDYLLQAFFTDMNAFSHFVLDTLLSHHGVQDAQSSFVLKEIKHTTSLPLNHLLKE
                     "
     regulatory      3548..3645
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            3855..4955
                     /gene="gcvT"
                     /locus_tag="WIX18_001579"
     CDS             3855..4955
                     /gene="gcvT"
                     /locus_tag="WIX18_001579"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HEZ5238665.1"
                     /translation="MITLKTTPFHQAHQDAGAKPVDFAGWELPIHYGSQIAEHEAVRT
                     DAGMFDVSHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLI
                     VYRTNEAETQYRIVSNGATREKDTAQFHKVGQEFGVAFNPRYDLGMLAVQGPKAIEKL
                     LTVKPEWADVIHGLKPFQGADLGNDWFVARTGYTGEDGVEVILPGTEAVAFFKALQAA
                     GVQPCGLGARDTLRMEAGMNLYGNDMDDDTSPLEAGMGWTVDLKDESRDFVGKAALLA
                     LKEKGVAVKQVGLLLGKGGILRAHMEVLTDKGKGETTSGVFSPSLKQSIAIARVPKDF
                     DGDTAKVLMRGKEVDVRVLKLPFVRNGQKQFD"
     gene            5117..5503
                     /gene="gcvH"
                     /locus_tag="WIX18_001580"
     CDS             5117..5503
                     /gene="gcvH"
                     /locus_tag="WIX18_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HEZ5238666.1"
                     /translation="MSNNIPAELKYVASHEWLRLEEDGTITVGITHHAQELLGDIVFV
                     ELPEVGANLAAEEQAGVVESVKAASDVYAPIAGEVVAVNEDLPSAPETANSDSYGAGW
                     FFKIKPVNPADYDGLLTAEQYAGEVD"
     gene            5655..6902
                     /locus_tag="WIX18_001581"
     CDS             5655..6902
                     /locus_tag="WIX18_001581"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HEZ5238667.1"
                     /translation="MQLTAVGLNHQTAPLSIREKLAFAAACLPEAVRNLARSKAATEA
                     VILSTCNRTELYCVGDSEEIIRWLADYHSLPIEEISPYLYTLGMQETVRHAFRVACGL
                     DSMVLGEPQILGQIKDAVRVAQEQESMGKKLNALFQKTFSVAKEVRTDTAVGENSVSM
                     ASASVKLAEQIFPDIGDLNVLFIGAGEMIELVATYFAAKSPRLMTVANRTLARAQELC
                     DKLGVNAEPCLLSDLPAILHDYDVVVSSTASQLPIVGKGMVERALKQRQSMPLFMLDL
                     AVPRDIEAEVGDLNDAYLYTVDDMVNIVQSGKEARQKAAAAAETLVSEKVAEFVRQQQ
                     GRQSVPLIKALRDEGEKARKQVLENAMKQLAKGATAEEVLERLSVQLTNKLLHSPTQT
                     LNKAGEEDKDLVHAVAQIYHLDK"
BASE COUNT         1784 a         1679 c         1965 g         1577 t
ORIGIN      
        1 gtcggaaggg aaaaatattg atttgattat gccggaattt aaaatgccgt ctgaatgttc
       61 agacggcata gcgtttacag cagtttgaaa acgaaaaaga taagggtatg tacgatgaag
      121 acgggtgtca ggaaggcgac cgaccacatc atatagccga agaaagtcgg catcggtacg
      181 ccgcgctgtt cggcaatggc cttgaccatg aagttcggtg cgttgccgat gtaggtcagt
      241 gcgcccatga ataccgaacc catagaaacc gccagcagcg aatgaaacag ggtacccgtc
      301 atcaaggctt gggcatcgcc gcccgccata ttgaaaaaaa cgagataagt gggcgcgtta
      361 tccaagaatg ccgacaatat gccgctcatc caaaaataca tcacattaat cggatgacct
      421 gccgtatcgt gaaccagcga taccaccccg cccagcgcgc ctgcctcgcc tgctttcaga
      481 atgctcagga cgggaaagat ggtgatgaag atgccgagga agagtttgcc cacttcggcg
      541 atgggttcaa agttgaattc gttgcctgcg cggacttgtt tgggcgtgat tgccatagat
      601 acggcggtca atgcaatcag gatgacatcg cggacgaggt tttgcagggc gtaacggctg
      661 ccgaggattt caaatcccgg gtgttcgggt ttccaaaggc cggacattag aaccgcgccg
      721 accacgcccg aaagcaggag gaagttccat ttgccgaaga tggcgatttt ttcgggtttt
      781 tcctgttgtg ccggcgtatc ttgtgcaatg ctttcctgtt tgaagaaacg gttgtcgatg
      841 aaatagaagg cggtcaacag gacagcggtg ctgatcagga cgggggcgaa catatgtttg
      901 accgtccaca tgaaatctac gcctttgagg aagccgagga agagtggggg gtcgcccaaa
      961 ggggtcagac cgccgccgat gtttgcaacc aggaaaatga agaagatgac gatgtgcacg
     1021 cggcgggtac ggttttggtt ggctttcagc agcggacgaa tcatcagcat tgctgcgccg
     1081 gtcgttccca tgatagaggc aagtgccgta ccgacggcaa gcagggcggt gttgagcttg
     1141 ggtgtgccgt tcaagtcgcc ccaaaccaaa atgccgcctg aaatggtgta cagggcaagc
     1201 agcagcagga tgaaggggat gtattcttca acgagtgcgt gtgcgacggt atggataccg
     1261 gcggacgcgc caaaaaccaa actgaacggg atgaggaaga gcaatgtcca aaaggcggtg
     1321 attttgccgt aatggtgatg ccaggtatgc gaaaaaaaca agggacccaa tgcgatagac
     1381 agcaaaatca gggcaaaggg caggctccac agcaggttta ggtttgcgcc gtccaaatct
     1441 gcggcgtaaa ccgatgcggg gaaaagcatt agtgaaaaca ggggtaggtg gcgcatcgtg
     1501 tttcctcgat tcaagcactg ccttgcgcgg cgcgtgggag tgatacaggc accgtgccgc
     1561 ccggacatag gcggactgtg ctgcctgttt gtttttgaaa aaagttttcc gattgattgt
     1621 aaagtaaata atcaggataa accagtttcc caaaccggaa ggcggcggga aggcggattg
     1681 ctgtgcttgg gaatatatgt tctttttgat aaataatttt atttaaaaca aataaatata
     1741 tgtctttaat aaataatcta tcgaaaacga aaaatgaatt tattttaaca tatatttgca
     1801 atgaaacagg tttgcccccc gtttgtttgc ccttatccct ttcagtacgg cattcaagat
     1861 tcgggcctgc gccacatcca tatggcgaca agggaacaaa aaaccgatga aaccgccccg
     1921 acccaccagc gttggggaaa ctgccaaaac attatcaggc aggatgcggt catcatactg
     1981 atggcgaata ttttggcttt gcgcggcact gcgccgtttt gttcccagtt atgaaccatc
     2041 ggaccgaaat agcggtgccg gtgcagccag cggtgaaagc gcggggatgc ctttgcccag
     2101 caggcggcgg agagcagtac gaacggcgtg gtcggcaaca gcggcaaaaa aatgccgatg
     2161 atacccaaca gcagggaaat gcagccgcag gcaattaaaa gataacgtat cattttgaaa
     2221 tatttttctt attgtgcgga taagggcagg atgtgatacc gagttttgcc cagccttcat
     2281 gtcccatttt ttccagcagg gcgatattgc gttcgaatat tgccgaagtg tcgggaaagg
     2341 cttgtgcggc tttggcaatg ctgtcttcgc ggatgaggtg cagcgtcgga tagggagaac
     2401 ggttggtgta gttgccgatg tcgtcgggtt cggtattctg aaagcggaat tggggatgga
     2461 acggtgcgat ttggacgatg ccttccaagc cgttttcgat aacggcggca tcggcaatat
     2521 cgagcatatc gttgaatacg tcgaaatcgg ggaatagggt cgggtgaacc agcagggtgg
     2581 tttccagttc ggtggcgggt gtattgccca gtcgctgcag ttcttcgtcc aagtcttcca
     2641 aaaaactgtc aaggtgtttg gcttcgctga ttgcgatgcg gacaaggttt ttaacgtggg
     2701 gggctttggc aaagggacac aggttcagac cgatgacggc tttttccaac cattgtccgg
     2761 tgtgttcggc aacagcatct ttattttcgg aagtattgat attcattatt gtcatgtaaa
     2821 tgtgtttgca gattgcacgt gcgggaaaat cgggaagggc actattcctt cagcaggtgg
     2881 ttgagcggca gggaggtggt gtgtttgatt tcttttaaaa caaagctcga ttgcgcatct
     2941 tgtacgccgt ggtgggacag gagcgtatcc aaaacaaaat gggaaaacgc gttcatatcg
     3001 gtaaaaaacg cctgaagcag gtagtcggtt tcccctgtca gggcgaagca gctcaagact
     3061 tcaggccatt ttcgaaccga tgcggcaaag tcttcccgcg cgtcttttgc tttgcggatg
     3121 gaaacgcgga taaatgcctg aagccccagg ttgacggatt ccggagacag cagcgcggca
     3181 tattggcgga cgatgccggc atcttccaac tgcttcagac ggcgcaggca cggagaaggc
     3241 gaaagtgcga cacgttcgga cagttcgaca ttggtcagcc tgccgttttc ctggagaacc
     3301 tgtaagattt taatatcggt tttgtctaaa gtgagttggg gcatatttgc gttccgtttt
     3361 aaggaattcg gattgtctgt ccgtatgttt gcggcaatcc gcacagatgg agaccatatt
     3421 aacatataaa aagttatacc gtcatccggg acaaattttg ttttcggaaa atcatgtgaa
     3481 aacagaggcg gtcggtttgc atctctttta agacggcttg cccaaaccgc cgattcaaga
     3541 cataatcggg aaatgtgcag gagagtgtta cacccaacta caatgtaacc accgaaggcg
     3601 cagacaccct taaatcgctc aggtatcagg gactgcacat tgaaacaaac aatctggaga
     3661 gcggcgttgg aataacgtcc accgaagggg agaaggccgt ctgaaccacc attcagacaa
     3721 ccgcgcaaag cagtgagcag actggtttgc catcatgcgg atacggccga aaatctcagg
     3781 ttcaaggaca gatagggtca tccgcgcatt ttgtgcggac ggcatctgaa caaaaaatcc
     3841 ggagaaactt gagaatgatt actctgaaaa ccaccccatt tcatcaagcc catcaagatg
     3901 caggcgcgaa gccggtagat tttgccggct gggagctgcc catccattat ggttcgcaaa
     3961 tcgccgaaca cgaagccgtg cgcaccgacg ccggtatgtt tgacgtatcc catatgcttg
     4021 ttaccgacgt agcaggcgca aatgccaaag cctttttccg caaattgatt gccaacgatg
     4081 tcgccaagct cgcttttgtc ggcaaagccc tttattccgc tttgctcaac gacaacggcg
     4141 gcgtgattga cgacttaatc gtttaccgca ccaacgaagc cgaaacccaa taccgcatcg
     4201 tgtccaacgg agcgactcgc gaaaaagaca cggcgcaatt ccacaaagtc ggacaagagt
     4261 tcggcgttgc ctttaatccg cgctacgacc tcggcatgct cgccgtacaa ggccctaaag
     4321 ccatcgaaaa actcctgacc gtcaaacctg aatgggcgga tgtgattcac ggcctcaaac
     4381 cgttccaagg tgcagacttg ggcaacgatt ggtttgtcgc ccgcaccggc tataccggcg
     4441 aagacggcgt cgaagtgatt ctgccgggca ctgaagccgt cgcattcttc aaagccctgc
     4501 aagcagcagg cgtacaacct tgcggtctcg gcgcgcgcga caccctgcgc atggaagccg
     4561 gcatgaacct ctacggcaac gatatggacg acgataccag cccgctcgaa gcaggcatgg
     4621 gttggaccgt tgatttgaaa gacgaaagcc gcgattttgt cggcaaagct gccttgttgg
     4681 cattgaaaga aaaaggcgtt gccgtcaaac aggtcggttt gctgctcggc aaaggcggca
     4741 tcctgcgcgc gcatatggaa gtgttgaccg acaaaggcaa aggcgaaacc accagcggcg
     4801 tattctcgcc cagcctgaaa caatccatcg ccatcgcccg cgtaccgaaa gactttgacg
     4861 gcgataccgc taaagtgctg atgcgtggca aggaagtgga cgtgcgcgta ttgaagttgc
     4921 cgttcgtgcg taacggtcaa aaacagtttg attaatatcg gttcagacgg cattttcatt
     4981 tcatatgccg tctgaaagca ggttttaatt gttgtccgat acggacgttt gtagaaagca
     5041 ttgaacaagg catctgtgga tattgattca tgcagatgcc gtctgaaaat aacccctatc
     5101 aatggagtat caaaccatga gcaacaacat cccggccgaa ctgaaatacg ttgccagcca
     5161 tgaatggctg cgccttgaag aagacggtac gattaccgtc ggcattaccc accacgcgca
     5221 agagctgttg ggcgacatcg tgttcgtcga gctgcccgaa gtcggcgcga accttgccgc
     5281 tgaagagcaa gccggtgtgg ttgagtctgt aaaagccgcg tccgacgtgt acgcaccgat
     5341 tgcaggcgaa gtcgttgccg tcaacgaaga tttgccaagt gctccggaaa ctgccaacag
     5401 cgattcttac ggcgcaggct ggttcttcaa aatcaaacct gtcaatcctg ccgattacga
     5461 cggtctgctg actgccgaac aatacgcggg cgaagtggat taaaccgccc ggctgcccga
     5521 cggcaaccgc cggacaaacg gaaactgcac cttcagacgg catttttgcg gtcggaggtg
     5581 cagttttttg tccgtgtttt aaggaagcag ttaggctata ataacggcct atattcatct
     5641 ttaccgattt tttcatgcaa cttaccgctg tcggactcaa tcatcaaacc gcacctttaa
     5701 gcatacggga aaagctggcg tttgccgcgg cctgcctgcc cgaagccgtc cgcaatcttg
     5761 cccgaagcaa ggcggcaacg gaggcggtaa tcctttctac ctgcaaccgc accgagcttt
     5821 actgtgtagg cgattcggaa gaaatcatcc gttggctcgc agactatcac agccttccca
     5881 tagaagaaat cagcccctac ctttatactt tggggatgca ggagactgtg cgccatgcct
     5941 tccgcgttgc ctgcggcttg gattcgatgg tgttgggcga gccgcagatt ttaggacaga
     6001 ttaaggatgc ggtcagggtt gctcaagagc aggaaagtat gggtaagaaa ctcaatgccc
     6061 tgttccaaaa aaccttttct gttgctaaag aggtccgtac cgatactgcc gtcggcgaaa
     6121 actcggtttc catggcttcc gcttccgtca aattggcgga acagattttt cccgacatcg
     6181 gcgatttgaa tgtcttgttt atcggcgcag gcgaaatgat tgagctggtt gccacttatt
     6241 ttgccgccaa aagtccccgg ctgatgacgg ttgccaaccg gacgctggcg cgtgcacagg
     6301 agttgtgcga caagctcggt gtcaacgccg aaccgtgcct gctgtccgat ctgcctgcta
     6361 ttctgcacga ttacgacgtg gtggtttctt caacggcgag ccagcttccg atagtcggca
     6421 aaggcatggt cgaacgtgca ttgaaacagc gtcagagtat gccgttgttt atgcttgatt
     6481 tggccgtgcc gcgcgatatt gaagcggaag tcggcgattt gaacgatgcc tatctttata
     6541 cggtggacga tatggtcaac atcgtccaaa gcggcaagga ggcaaggcag aaggccgccg
     6601 ccgccgccga aacgctggta tccgagaagg ttgccgaatt tgtcaggcag cagcagggca
     6661 ggcagagcgt ccccttgatt aaagccttgc gggacgaggg cgagaaagcg cgcaagcagg
     6721 tgttggaaaa tgcgatgaaa cagcttgcca aaggcgcaac ggcagaagag gttttggaac
     6781 ggctgtccgt ccaactgacc aacaagctgc tgcattcgcc gacccaaact ttgaataagg
     6841 cgggggaaga agataaagat ttggttcatg ccgtcgcgca gatttatcat ttggacaaat
     6901 aacggtgcgc cgggaaaaat gccgtctgaa gaggtttcag acggcatttt tttgtgccgc
     6961 ctgacaacat cgtgaaatcc cacattatat cgatgtaatc acaaa
//
LOCUS       DAWITQ010000109         6869 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.109, whole genome shotgun sequence.
ACCESSION   DAWITQ010000109 DAWITQ010000000
VERSION     DAWITQ010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6869)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6869)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6869
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.109"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(133..1266)
                     /gene="nrdB"
                     /locus_tag="WIX18_001582"
     CDS             complement(133..1266)
                     /gene="nrdB"
                     /locus_tag="WIX18_001582"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HEZ5238668.1"
                     /translation="MSYSTFPKTKNDALNEPMFFGQPVNVARYDQQKYEVFEKLIEKQ
                     LSFFWRPEEIDVSRDRIDYANLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSI
                     PELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARAEDIACYYDD
                     LIEYTQYYNLLGEGMHNVGGKPITVSLRGLKKKLYLCLMCVNVLEAIRFYVSFACSFA
                     FAERELMEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQL
                     FKKAAEQEKEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPI
                     PWINAWLSSDNVQVAPQEVEISSYLIGQIDSEVNTDDLGDFEL"
     gene            complement(1327..2514)
                     /locus_tag="WIX18_001583"
     CDS             complement(1327..2514)
                     /locus_tag="WIX18_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II restriction enzyme"
                     /protein_id="HEZ5238669.1"
                     /translation="MNDLAAQTIQVVNKSDDLVASAIQTANKSIAVYCRYIRPNDVGT
                     TGSHQSGFYIQKHFSDDLFDVVCQKGTNKTISIKINWQDGSVTNSNFKYYGQGTRNEA
                     RITGFGKNFEFLSDKYSGSLLVLCRACYKDLLFHAFVLSSDEDIEIFIAETNILPGSL
                     YLPKKQEVEDNLTKLFSLFPNFPKTEEMAVLARENIALNKTNVSNVLKQWVSKEYELF
                     SIFEKREFEIIKSKITDLDSFINFAHSFTNRRKARAGKSLELHLSRIFDEFSLKFETQ
                     AKTEGKKKPDFLFPGSEEYHAMDESGNFIFQTEKLTMLGSKTTCKDRWRQVLNEADRI
                     PHKHLFTLQEGISDTQIQEMSDENLTLVVPKESVKTFGTFGKTHVLTLENFIKYIKSQ
                     QVS"
     gene            complement(2507..3520)
                     /gene="dcm"
                     /locus_tag="WIX18_001584"
     CDS             complement(2507..3520)
                     /gene="dcm"
                     /locus_tag="WIX18_001584"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEZ5238670.1"
                     /translation="MKNKIQNQLDNIVTLNNEKFTFIDLFAGIGGFRIAMENVGGRCV
                     FSSEWDDKARQTYQVNFNDIPYGDITLKETKAAIPSKFDVLTAGFPCQPFSIAGVSKK
                     KSLGRETGFLDKAQGTLFFDVAEIIGKHRPKIFLLENVKNLVSHDKGNTFKVIKGTLE
                     ELDYQIFYQVMNAKYYVPQNRERIFIVGFDRQYFNKEINFNFPSPPESQPKLKQILED
                     DVDNSFTLSDNLWLYLQNYAKKHKAKGNGFGFGLVDLDGISRTLSARYYKDGSEILIP
                     QKGKNPRKLTPRECSRLMGFPKDFVIDAVSKTAAYKQFGNSIAVPLVQAIAKQIINEL
                     KNE"
     gene            complement(3578..5857)
                     /gene="nrdA"
                     /locus_tag="WIX18_001585"
     CDS             complement(3578..5857)
                     /gene="nrdA"
                     /locus_tag="WIX18_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HEZ5238671.1"
                     /translation="MNTPTDLKVTKRDGRLEAIDLDKIHRVVTWAAEGLENVSVSQVE
                     LKSHIQFYNGIRTDDIHETIIKAAADLISEDTPDYQYLAARLAIFHLRKIAYGEYEPP
                     HLYDHVKKLTDAGKYDRHILEDYSREEFDELNAYIDHERDMSFSYAAVKQLEGKYLVQ
                     NRVTSQIYETPQFLYVLVAMCLFSKYPKETRLDYVKRFYDAVSTFKVSLPTPIMSGVR
                     TPTRQFSSCVLIECDDSLDSINATTSAIVKYVSQRAGIGINAGRIRGLDSEIRGGEAR
                     HTGCIPFFKMFQAAVKSCSQGGVRGGAATLFYPLWHIEAESLLVLKNNRGVEDNRIRQ
                     LDYGVQINRLLYTRLIKGGNITLFSPNEVPGLYEAFFADQDEFERLYTKYEQDPDIRK
                     RIIPAADLFSTLMQERAGTGRIYIQNVDHCNTHSPFDPRVAPVHQSNLCMEIALPTKP
                     LDNINDPNGEIALCTLSAFNLGALNSLDELEGLADLTVRALDALLDYQGYPVEAARTS
                     TMGRRSLGIGVINYAYYLAKNGVRYSDGSALGLTHRTFEAIQYYLLKASANLAKEYGA
                     CTLFNQTVYSQGKLPIDTYKKDLDAVCGEPLHYDWESLRADIVKYGLRNSTLTALMPS
                     ETSSQIANATNGIEPPRGLVTVKASKDGILKQVVPEFETLKNAYETLWQLPGNEGYLK
                     LVGVMQKFVDQSISANTAYDPGKFEGGKVSMKQMLKDLLTAYKYGVKTLYYHNTRDGA
                     DDTQTDIQDDGCAGGACKI"
     gene            6386..6697
                     /locus_tag="WIX18_001586"
     CDS             6386..6697
                     /locus_tag="WIX18_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein"
                     /protein_id="HEZ5238672.1"
                     /translation="MLAILLSAILGLVSTTAAAGTSEPAHRDTKHIRKANKQMLHPEC
                     RKYLERRAAWYRSQGNVQELRENKKARKAFHSLPYAEQKIQCRAAYEAFDDFDGGSFR
                     R"
BASE COUNT         1844 a         1535 c         1456 g         2034 t
ORIGIN      
        1 gatttttgtt aatccactat aatccactat aaaaggaaca ataaccgatc ctacccgctg
       61 tttttcccat catacaacat acaaatgccg tctgaaacat ccggcttcag acggcatttt
      121 ttcaaaaaac atttacaact caaaatcgcc caaatcatcc gtattcactt cagaatcgat
      181 ctgaccgatc aaataagagg atatttccac ttcctgcggc gcgacctgta cgttgtcgga
      241 cgacagccac gcattaatcc acggaatcgg gttttgattt gcgccttcaa atccggccgg
      301 caaccccacc gcctgcatac gcagattggt aatatattcg acgtattggg ataagatttc
      361 tttgttcaaa ccaatcatcg aaccgtcttt aaacaaatat gccgcccatt ctttttcctg
      421 ttccgccgct tttttgaaga gttggaaaca ttcgtcctgc aactcggcag caatttctgc
      481 catttcagaa tcatcaacac ccgaacgcat cagattaagc atatgctgcg tgccggtcag
      541 gtgcagggct tcgtcgcggg caatcagttt gatgattttg gcgttgcctt ccatcaactc
      601 gcgctcggca aaagcaaacg agcaggcgaa tgaaacgtag aaacggatgg cttccaacac
      661 gttgacgcac atcaggcaga gatagagttt tttcttcaac ccgcgcaaag acacagtaat
      721 gggttttccg ccgacattat gcatcccttc gcccaacagg ttgtaatact gggtgtattc
      781 gattaagtca tcgtaatagc aggcaatgtc ttcggcgcgg gcggtaatgt attcgttttc
      841 gacaatatca tcaaacacga ccgacggatc attcacaata ttgcggatga tgtgggtata
      901 gctgcgcgag tgtatggttt cgctgaagct ccacgtttca atccacgttt ccaactcggg
      961 aatcgaaacc aaaggcagca aggcaacatt cggactgcgc ccttggatgg aatcgagcag
     1021 tgtttgatat ttcagattgc tgatgaaaat atgtttttcg tgttcaggca ggttggcgta
     1081 gtcgatacgg tcgcgcgaca cgtcgatttc ttccggccgc caaaaaaacg acaattgttt
     1141 ttcaatcagt ttttcaaata cctcgtattt ctgctggtca taacgggcga cattaaccgg
     1201 ctgaccgaaa aacatcggct cattcagcgc gtcgtttttg gttttgggaa aggtgctgta
     1261 tgacatagtt aagtgttcgc aggacataat ctattctcta tattaattaa aaatgatctg
     1321 taagttttaa ctaacctgct gagactttat atatttaata aaattttcta aagttaaaac
     1381 atgggttttc ccaaaagttc caaatgtttt tacggattct ttagggacaa ctaaggttaa
     1441 attctcatca ctcatttcct gaatttgagt atcagatata ccttcttgta gagtaaataa
     1501 atgcttatga ggaattcgat ctgcttcatt taaaacttgg cgccagcgat ccttacaagt
     1561 agtctttgaa cctagcattg tcagcttttc agtttgaaat atgaaattcc ctgattcatc
     1621 catcgcatgg tactcttcac ttccaggaaa taaaaaatct ggtttctttt tcccttctgt
     1681 cttcgcttgc gtctcaaatt ttaaggaaaa ttcgtcaaat attcttgata aatgtaactc
     1741 taaagatttt cctgctcttg cttttctgcg atttgtaaaa gaatgtgcaa aattaatgaa
     1801 gctatccaaa tcagtaattt ttgatttaat aatttcaaat tcacgttttt caaaaatgga
     1861 aaataattca tattcctttg aaacccattg ttttaacaca ttactaacgt tagttttatt
     1921 taatgcaata ttttcccttg ccaaaactgc catttcttca gttttgggga agttaggaaa
     1981 tagtgaaaat aattttgtta ggttatcctc tacttcttgt tttttaggta aatataaact
     2041 tcctggtaaa atgttagttt ctgcgataaa tatttcaata tcttcatctg aagataaaac
     2101 aaaagcatgg aataataaat ctttataaca agctctgcac aataccaata aggaaccact
     2161 atatttatca cttaaaaatt caaaattctt gccaaaaccc gtaattctcg cctcatttct
     2221 cgtgccttgg ccgtaatatt taaaattgct attagtgacg cttccatctt gccaattaat
     2281 tttgattgaa atagttttat ttgttccctt ttggcaaact acatcaaaga ggtcgtctga
     2341 aaaatgtttt tgaatataaa atcctgattg gtgactacca gtagtaccaa catcattggg
     2401 acgaatataa cgacagtata ctgcaattga tttatttgct gtctgtattg ctgaagctac
     2461 taagtcatcg gatttattta ctacttgtat tgtctgagct gccaagtcat tcatttttta
     2521 actcatttat aatttgttta gcaatagctt gaaccaacgg tacagcaatt gaattgccaa
     2581 actgcttgta tgcagctgtc ttggatactg catcaataac aaaatcttta ggaaatccca
     2641 ttaaacgcga gcactcccta ggtgtcagct tcctaggatt ttttcctttc tgagggatga
     2701 gtatttcgga accatctttg taatatcgtg cagatagagt tcgtgatatt ccatctaaat
     2761 caactaatcc aaaaccaaat ccattaccct ttgccttatg ttttttagcg taattttgaa
     2821 ggtaaagcca taagttatca gaaagagtaa aagaattatc tacatcatct tccaaaattt
     2881 gctttaattt tggttgtgat tctggtgggg aaggaaaatt gaaatttatt tccttattaa
     2941 aatattgtct atcaaaacct acaataaaaa tacgctccct attttgagga acataatatt
     3001 ttgcattcat aacttgataa aatatctgat agtcaagctc ttctaaagtc cctttaatta
     3061 ctttaaatgt atttcctttg tcatgcgaaa caaggttttt cacattctct aaaagaaaaa
     3121 ttttaggtcg atgttttcca ataatttcag caacatcaaa aaatagagtt ccctgcgcct
     3181 tatctaagaa gcctgtttct cgtcctaggc tttttttctt tgaaacacca gctatagaga
     3241 atggctgaca cgggaatcct gctgttaata catcaaactt acttggaata gctgctttgg
     3301 tttcctttaa tgtaatatct ccataaggaa tatcattaaa atttacttgg taggtttgac
     3361 gggctttatc atcccattca ctagaaaata cacatcgccc accaacattc tccattgcaa
     3421 tgcgaaaacc acctattccc gcaaataaat caataaaagt aaatttctca ttatttaagg
     3481 taactatatt atctaattga ttttgtattt tatttttcat attttatatt tcagatgatt
     3541 tattaatcta aaggccatct gaaaactccc cctttcatca aatcttacaa gccccgcccg
     3601 cgcagccgtc atcctgaata tcggtctgcg tatcgtccgc gccgtcgcgg gtgttatggt
     3661 agtacagggt tttgacgccg tatttgtagg cggtcagcag gtctttgagc atttgtttca
     3721 tagaaacttt gccgccttcg aatttgcccg ggtcgtaggc ggtattggcg gaaatcgatt
     3781 gatcgacgaa tttttgcatc acgccgacaa gtttcaggta gccttcgttg ccgggaagct
     3841 gccacagggt ttcataggca tttttcaggg tttcaaactc cggcacgact tgtttcaaaa
     3901 tgccgtcttt cgatgctttg accgttacca atccgcgcgg cggctcgatg ccgttggtgg
     3961 cgttggcgat ttgcgaactg gtttcagacg gcatgagcgc ggtcagggtg gagttacgca
     4021 ggccgtattt gacgatgtcg gcacgcaggc tttcccagtc gtaatgcaaa ggctcgccgc
     4081 agacggcatc caaatctttt ttgtaagtgt cgatgggcag tttgccttgc gaataaacgg
     4141 tttggttaaa gagcgtgcac gcaccgtatt ctttggcaag gtttgccgat gctttgagca
     4201 ggtaatactg tatggcttca aaggtacggt gggtcagacc gagcgcggag ccgtcgctgt
     4261 agcggacacc gtttttcgcc agataataag catagttaat cacgccgatg ccgagcgaac
     4321 ggcgacccat agtagaggta cgcgcggctt ctaccggata tccctgataa tctaaaagtg
     4381 catcgagcgc acgcacggtc aagtcggcaa gcccttccaa ttcgtccaag ctgtttaatg
     4441 cgcccaagtt aaaggcagac agtgtacaca gggcgatttc gccgttcgga tcgttgatat
     4501 tgtccagcgg tttggtcggc agggcgattt ccatacacaa gttggactga tgaacaggcg
     4561 cgacgcgcgg atcgaacggg ctgtgcgtat tgcagtgatc gacgttttga atgtagatgc
     4621 gcccggttcc ggcacgctcc tgcatcagcg tggaaaacag gtcggcagcc ggaatgatgc
     4681 gcttgcggat atcagggtct tgctcgtatt tcgtatagag ccgctcaaat tcgtcttggt
     4741 cggcaaaaaa cgcttcgtac aatcccggaa cctcgttggg cgaaaacagc gtaatgttgc
     4801 cgcccttaat caggcgggtg tacagcaggc ggttgatttg cacgccgtaa tcaagctgac
     4861 ggatacggtt gtcttccaca ccgcggttgt ttttcaacac cagcaggctt tcggcttcga
     4921 tatgccacaa ggggtagaac aaagttgccg ctccgccgcg cacgccgcct tgcgaacagg
     4981 atttgaccgc cgcctgaaac attttgaaaa acggaatgca gccggtatgc cgcgcttcgc
     5041 cgccccggat ttcgctgtcc aaaccgcgga tacgtccggc attgatgccg atgcccgcac
     5101 gctgggaaac gtatttcaca atcgcgctgg tggtggcgtt gatggaatcc aggctgtcgt
     5161 cgcattcgat cagtacgcag cttgagaact ggcgcgtagg cgtacgcacg ccgctcataa
     5221 tcggggtcgg cagcgatact ttaaatgtgg aaacggcatc gtaaaaccgt ttgacgtaat
     5281 cgaggcgtgt ttctttggga tatttgctga aaagacacat cgccaccaga acatataaga
     5341 actgcggtgt ttcataaatc tggctggtaa cgcggttctg taccagatat ttgccttcga
     5401 gctgtttgac agcggcatag gaaaaggaca tatcgcgttc gtggtcgata taggcgttca
     5461 gttcatcaaa ttcttcgcgg ctgtaatcct caaggatatg cctgtcgtat tttccggcat
     5521 cggtgagctt tttaacgtgg tcgtaaaggt gcggcggctc gtattcgccg taggctattt
     5581 tacgcagatg gaaaatcgcc aaacgcgcgg caaggtattg gtagtccgga gtatcttccg
     5641 aaattaaatc ggcagcggcc ttgatgatgg tttcgtggat gtcgtcggtg cggatgccgt
     5701 tgtagaactg gatgtgcgat ttcaactcga cctgcgacac ggaaacattt tccaatcctt
     5761 ccgccgccca agtaacgaca cggtgaatct tatccaaatc aatggcttct aatcttccgt
     5821 ctcgtttggt tactttcaaa tcagtcggtg tattcatcgc ttcctcttcc actcttgata
     5881 ttcaagacac ggtcttttca aacaaattaa gacagacaat atagtggatt tttggcattt
     5941 tctccagtct tgacaacggt tgcatttttc agtttcaggc aatgcgcgat aaaacccgcc
     6001 tgtcgtattt ttcctataat atttgtttta tctgataatt ctttaccgat aaaaaacggg
     6061 taaatttttt gccttttgac cggctccggc tacaaggcgg tgaaataagg attttccgac
     6121 gaaaaaggaa agcttccggt tttctgcccc tgcgaattgt taaattttgc aaagtatgat
     6181 tttgccgcgc cgccgccgac aaattccatt ttcttaccga ttgaaattta ttattgagat
     6241 taatgtgtta tttgaatccg catatcaaac ggcaagtttt gtcggctgaa tgagtctgaa
     6301 actgccgaca atttgcccgc tccatccttc catcctatac tggaaggaat gacaaactga
     6361 aaggatcgtc atgtctgtca aaaagatgct tgccatactg ttgtctgcaa tattgggact
     6421 ggtatcgaca actgccgctg ccggtacgtc agaacccgcc caccgcgata ccaaacatat
     6481 ccgcaaggca aacaagcaga tgctgcaccc cgaatgcagg aaatatttgg aacgccgtgc
     6541 cgcgtggtac cgatcgcaag gcaacgtgca ggaattgcgc gaaaacaaaa aggcgcgcaa
     6601 agcattccac tccctgcctt atgcggaaca gaaaatccaa tgccgggcgg cttatgaggc
     6661 tttcgatgat ttcgacggcg gcagtttccg ccgttaatcc catataaaat atgccgtctg
     6721 aacacaggtt cagacggcat tttccataga tacaacaaac tatccttacg ccatttcgtt
     6781 tgaggtcctc ccgttgccgc agccttaata tagtggatta acaaaaatca ggacaaggcg
     6841 acgaagccgc agacagtaca gatagtacg
//
LOCUS       DAWITQ010000110         6755 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.110, whole genome shotgun sequence.
ACCESSION   DAWITQ010000110 DAWITQ010000000
VERSION     DAWITQ010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6755)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6755)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6755
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.110"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(114..473)
                     /gene="rplT"
                     /locus_tag="WIX18_001587"
     CDS             complement(114..473)
                     /gene="rplT"
                     /locus_tag="WIX18_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005795139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HEZ5238673.1"
                     /translation="MPRVKRGVTARARHQKIFALAKGYRGRRKNVYRVAKQAVMKAGQ
                     YAYRDRRQRKRQFRQLWIVRINAGARENGLSYSKFMNGLKRASIEIDRKVLADLAVFD
                     KAAFAQLVEKAKAALAA"
     gene            complement(486..683)
                     /gene="rpmI"
                     /locus_tag="WIX18_001588"
     CDS             complement(486..683)
                     /gene="rpmI"
                     /locus_tag="WIX18_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012698199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEZ5238674.1"
                     /translation="MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQL
                     RGTSMVNDRDLASVAKMLPYA"
     gene            complement(830..1351)
                     /gene="infC"
                     /locus_tag="WIX18_001589"
     CDS             complement(830..1351)
                     /gene="infC"
                     /locus_tag="WIX18_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEZ5238675.1"
                     /translation="MIAQEREARINGEITAKEVRLISESGEQLGVVSVREALAMAEGQ
                     DVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDEGDY
                     QIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKME
                     GRQMVMMIAPKKK"
     gene            complement(1369..3282)
                     /gene="thrS"
                     /locus_tag="WIX18_001590"
     CDS             complement(1369..3282)
                     /gene="thrS"
                     /locus_tag="WIX18_001590"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HEZ5238676.1"
                     /translation="MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKAAVAGRVNGKL
                     VDACDPIVEDSAVQIITPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGF
                     YYDIATEKPFTPEDVAAIEARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLI
                     DDMPEVEAMGMYHHQEYVDMCRGPHVPNTRFLKNFKLTKLAGAYWRGDSNNEMLQRIY
                     GTAWATKDELKAYIQRIEEAEKRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVI
                     EQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKDNMFVTSSEKREYAVKPMNCP
                     GHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQI
                     VSEARAFNELLVRIYKQFGFHDVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACGVE
                     WGELPGEGAFYGPKIEYHVRDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVM
                     LHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGF
                     RAELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRKAEDLGSLDLDDFIA
                     QLQQEITDALVNH"
     gene            complement(3336..3412)
                     /locus_tag="WIX18_001591"
     tRNA            complement(3336..3412)
                     /locus_tag="WIX18_001591"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3376..3378),aa:Val,seq:gac)
     gene            3591..4706
                     /gene="tgt"
                     /locus_tag="WIX18_001592"
     CDS             3591..4706
                     /gene="tgt"
                     /locus_tag="WIX18_001592"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEZ5238677.1"
                     /translation="MLKFTLHKKDGYARRGTLELNHGKIETPVFMPVGTYGSVKAMNP
                     QNLHDIKAQIILGNTYHLWLRPGLEVVEQFGGLHGFIGWDKPILTDSGGFQVFSLSDM
                     RKLTEEGCTFKSPINGDKLFLSPEISMKIQTVLNSDIAMQLDECTPGEATREQARKSL
                     QMSLRWAERSKKAFEDLKNPNALFGIVQGAMYEDLREESLKGLEELDFPGLAIGGLSV
                     GEPKPEMYRMLRAVGPILPEHKPHYLMGVGTPEDLVYGVAHGVDMFDCVMPTRNARNG
                     WLFTRFGDLKIKNAKHKLDKRPIDESCTCYACQNFSRAYLHHLHRAGEILGAQLNTIH
                     NLHFYQVIMAEMRDAIEQGKFADWQARFHENRARGTD"
     gene            4716..5798
                     /locus_tag="WIX18_001593"
     CDS             4716..5798
                     /locus_tag="WIX18_001593"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEZ5238678.1"
                     /translation="MPSEAASDGILPLYPTRTIFQKPIMLPFLPEPSLSYTQQNRTAV
                     LLLNLGTPDAPTAQAVRPYLKSFLTDRRVVELPKWLWYPILHGLVLTLRPKKSAHAYE
                     KIWFKEGSPLEVYTARQAAALAERMPDLIVRHAMTYGNPSVADVLSELKAQGAGRLLV
                     IPMYPQYAASSSGAAVDKVCEQLLLQRNQMSVRTVSRFYDDTGYIDAMKNHILRYWAE
                     HGRGKKLMLSFHGVPQKHYDLGDPYPDECRHTAKLLAEALELTEDQYVVSFQSQFGRA
                     KWVTPSTQDLFGKLPKQGVTELDVFCPGFLADCLETMEEIALMGREQFYEAGGKSYRY
                     IPCLNDNPDWIDALVALAEENLGGWR"
     gene            5990..6391
                     /locus_tag="WIX18_001594"
     CDS             5990..6391
                     /locus_tag="WIX18_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEZ5238679.1"
                     /translation="MNTTRLPTALVLGCLCAAASAADNSIMTKGQKVYESNCVACHGK
                     KGEGRGTMFPPLYRSDFIMKKPQVLLHSMVKGINGTIKVNGKTYNGFMPATAISDADI
                     AAVATYIMNAFDNGGGSVTEKDVKQAKGKKN"
     gene            complement(6454..6744)
                     /locus_tag="WIX18_001595"
     CDS             complement(6454..6744)
                     /locus_tag="WIX18_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238680.1"
                     /translation="MAKYFTETGIGVREHFDFFGEFVVSPAARSGDLALAYGLRLEAG
                     EEGLSLAELFDKRSDSQEPVECGRIDIGGFMLTAKEVDGGGNIGSMGLKVPR"
BASE COUNT         1720 a         1823 c         1576 g         1636 t
ORIGIN      
        1 ttttaacgca aatttattta aaaaaataga ctttaaagaa agaaaatcaa tcacatagaa
       61 tttctgcaaa caaagaaaaa aggaagccgc agcttccttt tcaatttttt ggattaagca
      121 gccaaagcag ctttggcttt ttcaaccaat tgtgcaaaag cggctttatc gaacacggcc
      181 aaatcagcca atactttgcg gtcgatttcg atagaggcgc gtttcagacc attcataaat
      241 ttgctgtaag acaacccgtt ttcacgcgca cctgcattga tacggacaat ccacaattga
      301 cggaattggc gtttgcgttg gcggcggtcg cggtatgcgt attggccggc tttcattacc
      361 gcctgcttgg caacgcggta aacgttttta cgacggccgc gatagccttt ggctaacgcg
      421 aagatttttt ggtgacgggc acgagcggta acaccgcgtt ttacgcgtgg catattctaa
      481 actccttaag cgtagggtaa cattttagca acagaagcca aatcgcgatc atttaccata
      541 gaggtaccgc gcagttggcg tttgtttttg gtggtctttt tagtcaagat gtggcgtttg
      601 aacgcatgag cgcgtttcac accgccgtta cccagtactt taaagcgttt tttcgcgcta
      661 gacttggttt tcattttagg catgggaaaa ctccattcgt tatcggataa ggcattaggg
      721 ggttttaaaa catcggtttc aaacacttga acccacaatg ccacggtttt ttgccgcaat
      781 tgaaaactta ctccgaagcg gcaatcggag taagcggaga attatagctt tattttttct
      841 tcggcgcaat catcatcacc atttggcgac cttccatttt gggaaaggac tcgatttgcg
      901 ccacttcagc caaatcttct tttacacgtt ccaaaagttg cgcgccgagt tgctggtgag
      961 ccatttcacg gccgcgaaaa cgcaatgtca ctttgacttt atcgccgtcg gcaaggaagc
     1021 ggttaatgtt gcgcatcttg atttgataat cgccctcatc cgtacccgga cggaatttga
     1081 tttccttgat ttgcacctgc ttttggtttt tcttggcttc gtcgcgcttc ttggcttgtt
     1141 ggtatttgta tttaccgtaa tccatcagtt tgcacacagg cggtttagca gttggggaaa
     1201 tctctaccaa atcgacatcc tgcccttcgg ccatagccaa agcttcacga actgaaacga
     1261 caccaagctg ttcgcctgac tcactgatta aacgcacttc tttggcggta atttcgccgt
     1321 tgattcgtgc ttcgcgttct tgagcgatga tgaatactcc tataaaaatt aatgattgac
     1381 gagggcatca gtgatttctt gctgcaattg cgcaatgaaa tcatccaaat ccaaagaacc
     1441 caaatcttct gctttgcggc gtaccgccac tttgttttcc tgcttctcct tatcgccgac
     1501 aacgatttga taagggaaac ggtattggct gttgtcgcgg attttgtaac cgattttttc
     1561 gttacgcaaa tccaactcgg cgcggaatcc tgccgcctgc aatttggcag ccacttcacg
     1621 gcagtaatcc gcttgatttt cggtgatatt cataatcacc atttgaaccg gcgccaacca
     1681 taacgggaat gagcctgcat ggttctcaat cagaatgccg ataaaccgct ccaaagaacc
     1741 caaaatggcg cgatgcaaca taacaggacg cgcacggtcg ttgttttcag ttacatattc
     1801 ggcattcaaa cgctccggca atacgaaatc cagttgtaat gtaccgcatt gccaagaacg
     1861 acccaaggca tctctgacat gatattcgat tttaggcccg taaaacgcac cctcgcccgg
     1921 caattcgccc cattccacgc cgcaggcagt caatgcctcg cgcaaaccct gctctgcctt
     1981 atcccacacg tcatctgaac ctgcgcgttt ttcagggcga agagaaagct tgacggatac
     2041 atcatggaaa ccgaactgtt tgtagatgcg aaccaacaat tcattgaacg cacgggcctc
     2101 gctgacgatt tggtcttcgg tacagaaaat atgcgcatca tcctgcacaa atccacggac
     2161 ccgcatcaga ccatgcaatg caccgcttgg ttcattgcgg tggcaagaac cgaactcggc
     2221 caaacgcatc ggcaaatcgc gatatgagcg caaaccgtta ttaaaaattt gcacatgacc
     2281 cggacagttc atcggtttca ccgcgtattc gcgtttttct gaactggtca cgaacatatt
     2341 gtctttgtag ttgtcccaat ggccggattt ttcccaaaag gttttatcca taatttgagg
     2401 cgttttgacc tctttataac cggcggcgtt cagctcttta cgcatatgct gttcaatcac
     2461 ttgccacaaa gcccagcctt taggatgcca aaacaccatg cccggcgctt cgtcttgcag
     2521 atggaacaga tccaattgct tgccaagttt gcggtggtcg cgcttttcgg cttcttcgat
     2581 acgttgaata taggctttta attcgtcttt tgtcgcccaa gccgtaccgt atatgcgttg
     2641 cagcatttca ttattgctgt cgccgcgcca gtatgcgccc gccaacttgg tcagtttgaa
     2701 gtttttcagg aaacgggtat tcggaacgtg cgggccgcgg cacatatcga catattcctg
     2761 atgatgatac atccccatcg cttccacttc gggcatatcg tcaatcaggc gcagtttgta
     2821 ttcttcgccg cgctcttgaa aaattttaat cgcctccgca cgcggagtca tgattttgac
     2881 cacatcatag tcttgggcaa tcaattcttt catacgcgct tcaatggcgg caacatcttc
     2941 cggtgtaaac ggtttttccg tggcaatgtc gtaataaaag ccctcttcaa tgacggggcc
     3001 gataaccatt tttgcattag gatagagttg cttgacggca tgcccgacaa gatgggcgca
     3061 ggaatggcgg atgatttcga tgccttcctg atctttcgga gtaatgattt gaacagcaga
     3121 atcttcaaca atcgggtcgc acgcatcgac caatttgccg tttaccctgc ctgccaccgc
     3181 cgccttcgcc aaaccggcac cgatagacgc agcaatttga gccacggtaa cgggggattc
     3241 gtattgtcgg actgagccgt ccggcaaggt aatgttcaac atcaaaaagc tccaaaacat
     3301 taaaaaataa cggcataaat gccgttatgg gaatttggta ggcacgattg gattcgaacc
     3361 aacgaccccc accatgtcaa ggtggtgctc taaccaactg agctacgtgc cttcaaagaa
     3421 tttttgcatt ttatcgggtc gttttaattt ttgcaagagg tatgtgcgtt tctttatgca
     3481 acattgcggc aagatttggg gatgtcgtct gaaaaaccgt gggaaatcat ttataatgcc
     3541 gtcttttaaa acatatttcg ccccctgtcg cccaactgac attcaatctt atgcttaaat
     3601 ttaccttaca caaaaaagac ggatacgccc gacgcggcac gctggagttg aaccacggca
     3661 aaatcgaaac gccggtattt atgcctgtcg gtacttacgg ttcggttaag gcgatgaacc
     3721 cgcaaaacct gcacgacatc aaggcgcaaa ttattttggg caacacttat catttgtggc
     3781 tgcgtccggg cttggaggtc gtcgaacagt ttggagggct tcacggcttt atcggctggg
     3841 acaaaccgat tttgaccgac tcgggcggtt ttcaggtttt ttctttgtcg gatatgcgca
     3901 agctgacgga agaaggctgt acgtttaaaa gcccgattaa cggcgacaag ctgtttttat
     3961 cgcctgaaat ttctatgaaa atccaaacgg ttttgaactc ggacatcgcg atgcagttgg
     4021 acgaatgcac gccgggcgag gcgacgcgcg aacaggcgcg aaaatcgttg caaatgagcc
     4081 tgcgctgggc ggaacggagc aaaaaagcct ttgaagattt gaaaaacccg aacgcactgt
     4141 tcggcatcgt gcaaggcgcg atgtatgaag atttgcgcga agagtcgctg aaaggcttgg
     4201 aagagctcga tttccccggc ttggccatcg gcggcttgtc cgttggcgaa cctaagcccg
     4261 aaatgtaccg catgttgcgc gccgtcggcc ctatcctgcc ggaacacaaa cctcattatt
     4321 taatgggcgt cggtacgcct gaagacttag tgtacggcgt ggcacacggc gtggatatgt
     4381 tcgactgcgt catgcctact cgcaatgcgc gtaacggctg gctgtttacc cgttttggcg
     4441 atttgaagat caaaaacgcc aaacacaagc tcgacaagcg tccgatagac gaaagctgca
     4501 cctgctacgc ctgccaaaac ttcagccgcg cctacctgca ccatctgcac cgcgccggcg
     4561 aaatcttggg cgcacagctc aacaccatcc acaacctgca tttctaccaa gtcattatgg
     4621 cggaaatgcg cgatgccata gaacaaggca aatttgccga ctggcaggcg cgattccacg
     4681 aaaaccgtgc tcgcggcaca gactgactcc cggcaatgcc gtctgaagcc gcttcagacg
     4741 gcattttgcc gctttaccct acccgcacta tttttcagaa accgatcatg cttccattcc
     4801 ttccagaacc ctccctttcc tatacgcaac aaaaccgtac cgccgttttg ctgttgaacc
     4861 tcggcacgcc cgacgcgccg accgcgcagg cggtacgacc ttatctgaag tcctttctga
     4921 ccgaccggcg cgtcgtcgaa ctgcccaaat ggctgtggta tcccattctg catggtctgg
     4981 tactgacgtt gcgccccaaa aaaagcgcgc acgcctatga aaaaatctgg tttaaggaag
     5041 gttcgcccct agaagtttac acagcacgcc aagctgccgc gcttgccgaa cgtatgcccg
     5101 acctcatcgt ccgccacgcc atgacctacg gcaatccttc ggtggcagac gtattgtcgg
     5161 aactgaaggc gcaaggcgcg ggcagactgc tggtcatccc gatgtacccg caatatgccg
     5221 cttccagcag cggagcggca gtagataagg tgtgcgaaca attactgctg caacggaacc
     5281 aaatgagcgt ccgcaccgtt tcgcgctttt atgacgatac cggctacatt gatgcgatga
     5341 aaaaccacat cctccgatat tgggcggaac acggacgtgg gaaaaaactg atgttgagtt
     5401 ttcacggcgt accgcagaag cactacgacc tcggcgaccc ctatcccgac gagtgccgcc
     5461 acaccgccaa actgcttgcc gaagcactgg aactgaccga agaccaatat gtcgtatcgt
     5521 tccaaagcca attcggcagg gcaaaatggg ttacaccgag cacgcaggat ttgttcggca
     5581 aactgcccaa acagggggta accgagctgg acgtattctg cccgggcttt ttggcagact
     5641 gtttggaaac catggaagaa atcgccctga tggggcggga acagttttac gaagcaggcg
     5701 gcaaaagcta ccgctacatc ccctgcctca acgacaaccc cgactggata gacgcactcg
     5761 tcgcacttgc cgaagaaaac cttggcggct ggcgttgaaa ctgtttgacc catgtctaaa
     5821 atgccgtctg aacgccgtgt tcagacggca ttttcccgct actttagcgt atgatggcat
     5881 ctatgccgga caacaacatc aagtgcaacc ttactaccga ttcggcaaaa aaatctttca
     5941 cccgctacgc aaaatcaaca acaaggtttc aaacattaag gaaacaccaa tgaacacaac
     6001 ccgactgccg accgccctcg tcttgggctg cctctgcgcc gccgcttctg ccgccgacaa
     6061 cagcatcatg acaaaagggc aaaaagtgta cgaatccaac tgcgtcgcct gccacggcaa
     6121 aaagggcgaa ggccgcggaa ccatgtttcc gccgctctac cgctccgact tcatcatgaa
     6181 aaaaccgcag gtgctgctgc acagcatggt caaaggcatc aacggtacaa tcaaagtcaa
     6241 cggcaaaacc tacaacggat tcatgcccgc aaccgccatc agcgatgcgg acattgccgc
     6301 cgtcgccact tatatcatga acgcctttga caacggcggc ggaagcgtta ccgaaaaaga
     6361 cgtaaaacag gcaaaaggca aaaaaaacta aacagacaaa atgccgtctg aaaccggcaa
     6421 tccggcttca gacggcattc aaatcaaacc tttctaacgc ggtactttca gccccataga
     6481 cccgatattg ccgccaccgt caacctcctt cgcggtcagc ataaagccgc cgatgtcaat
     6541 acggccgcac tcgaccggct cctgactgtc ggaacgctta tcgaaaagct cggcaaggct
     6601 caaaccctct tcgcccgctt ccagcctcaa accgtaagca agtgccaaat cacccgaacg
     6661 tgctgccggc gaaacgacaa actcgccgaa aaaatcaaaa tgctcacgga caccgatacc
     6721 cgtctcggta aagtatttcg ccattttata gtgaa
//
LOCUS       DAWITQ010000111         6713 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.111, whole genome shotgun sequence.
ACCESSION   DAWITQ010000111 DAWITQ010000000
VERSION     DAWITQ010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6713)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6713)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6713
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.111"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            173..1231
                     /gene="alr"
                     /locus_tag="WIX18_001596"
     CDS             173..1231
                     /gene="alr"
                     /locus_tag="WIX18_001596"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEZ5238681.1"
                     /translation="MRPLNVQIRLGNLRHNYRILKEMHGGKLLAVVKADAYGHGAVRC
                     AFALADLADGFAVATIDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQ
                     WQLEALLSRHWKKPVKVWLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFS
                     CADEPESGITEIQMEAFDLGTEGLEGEESLANSAAILNVPEARRDWGRAGLALYGISP
                     FGGSDDRLKPVMRLSTRIFGERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRR
                     APSNSPVAVDGKLTRVIGRVSMDMMTIELDASQEGLGHEVELWGDTVNINTVAEAAGT
                     IPYELMCNIKRAKFTYIE"
     gene            complement(1773..3128)
                     /locus_tag="WIX18_001597"
     CDS             complement(1773..3128)
                     /locus_tag="WIX18_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PFL family protein"
                     /protein_id="HEZ5238682.1"
                     /translation="MSIQSGEILETVKMVADQNFDVRTITIGIDLHDCISSDINVLNQ
                     NIYNKITTVGKDLVTTAKYLSAKYGVPIVNQRISVTPIAQIAAATHADSYVSVAQTLD
                     KAAKAIGVSFIGGFSALVQKGMSPSDEVLIRSIPEAMKTTDIVCSSINIGSTRAGINM
                     DAVKLAGETVKRTAEITPEGFGCAKIVVFCNAVEDNPFMAGAFHGSGEADAVINVGVS
                     GPGVVKAALENSDATTLTEVAEVVKKTAFKITRVGELIGREASKMLNIPFGILDLSLA
                     PTPAVGDSVARILEEMGLSVCGTHGTTAALALLNDAVKKGGMMASSAVGGLSGAFIPV
                     SEDEGMIAAAEAGVLTLDKLEAMTAVCSVGLDMIAVPGDTPAHTISGIIADEAAIGMI
                     NSKTTAVRIIPVTGKTVGDSVEFGGLLGYAPVMPVKEGSCEVFVNRGGRIPAPVQSMK
                     N"
     gene            complement(3143..3415)
                     /locus_tag="WIX18_001598"
     CDS             complement(3143..3415)
                     /locus_tag="WIX18_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HEZ5238683.1"
                     /translation="MNNSVITVIGKDRVGIVYDVSKILAENQINILNISQQLMDDFFT
                     MIILVDTSKCSKSRQEVLDLFAEESKKLALDIRMQNEEIFQAMHRI"
     gene            complement(3541..4278)
                     /locus_tag="WIX18_001599"
     CDS             complement(3541..4278)
                     /locus_tag="WIX18_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system YwqK family antitoxin"
                     /protein_id="HEZ5238684.1"
                     /translation="MKKLSRIVFSTVLLGFSAALPAQTYSVYFNQNGKLTATMSSAAY
                     IRQYSVVAGIAHAQDFYYPSMKKYSEPYIVASTQIKSFVPTLQNGMLILWHFNGQKKM
                     AGGFSKGKPDGEWVNWYPNGKKSAVMPYKNGLSEGTGYRYYRNGGKESEIQFKQNKAN
                     GVWKQWYADGSIKTEMVMVNDEPAKILTWDESGRLLSELSIRHHQRNGVVLEWYEDGS
                     KKSEAVYQDDKLVRKTQWDKDGYLIEP"
     gene            complement(4559..5458)
                     /gene="prmB"
                     /locus_tag="WIX18_001600"
     CDS             complement(4559..5458)
                     /gene="prmB"
                     /locus_tag="WIX18_001600"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEZ5238685.1"
                     /translation="MFNQAAQELTTIRDILRFAVSRFNEAGLFFGHGTDNAHDEAAYL
                     ILHTLNLPLDMLAPYLDAKLLEAEKEEVLAVIERRAVEHIPAAYLTHQAWQGEFDFYV
                     DERVIIPRSFIYELLGNGLRPWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAV
                     DVSLDALEVAGINVEDYGLEERIRLIHTDLFEGLEGTYDLIVSNPPYVDAESVEALPE
                     EYLHEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHNRDVLEAAYPELPFT
                     WLETSGGDGFVFLLTREQLLGEE"
     gene            5603..6196
                     /locus_tag="WIX18_001601"
     CDS             5603..6196
                     /locus_tag="WIX18_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238686.1"
                     /translation="MVDGMGNLIGWEKTGLVVGKQWITAKDDKVSDVCNANGEMGVIG
                     LYEPFSHGALTIPGHPNCRCEVVSVSGGELGEFAEKKELRKAAMQYARDNFIGKSYVN
                     ENSGHELKVTWQGVKHATSKANQAELSIMTKLDDLLRYAKYEGSYSDRKGHPNIIAAH
                     KYRAVAKVGNESLNIGVIVREFPDGHKHYDHFILKDE"
     gene            6308..>6713
                     /locus_tag="WIX18_001602"
     CDS             6308..>6713
                     /locus_tag="WIX18_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 family phage prohead protease"
                     /protein_id="HEZ5238687.1"
                     /translation="MTKLYAEIAKREAQDDGTVKVWGYASSEEIDSDGEVIATAAMKA
                     AIPDYMKFDAGREMHGSNAAGTAIEINVEDDGITFFGAHIIDPVVVSKVKTGVYKGFS
                     IGGSVTARDDLNKSQITGLKLTEISLVERPANP"
BASE COUNT         1839 a         1665 c         1535 g         1674 t
ORIGIN      
        1 tgggaaagcg attatatcag gaaaagcaaa ccgccttcct acctgaaaac tgctgcttcg
       61 gcttgaagac acaagggtct ttaatatttt aaaagccttg ccgttggatt ataattccct
      121 aattgatttc ttaattttgc taataaacac ttgcttggta aggaatgaat ttatgcgccc
      181 tttgaacgtg cagatcaggt tgggcaacct taggcacaat tatcggattt taaaggaaat
      241 gcacggaggc aagctgttgg cggtagtgaa ggccgacgca tacggacacg gtgcggtcag
      301 atgtgctttc gcgctggcag acttggcaga cggctttgcc gtggcgacaa tcgatgaagg
      361 aatcaggctg cgggagagcg gcattaccca tccgattgtc cttttggaag gcgtatttga
      421 agcatcagag tacgaagcgg tcgaacaata ctcgctctgg ccggcagtcg gaaaccaatg
      481 gcaacttgag gctttgcttt cccgccattg gaaaaaacct gtcaaggtct ggttgaaaat
      541 ggattcggga atgcaccgta ccggtttttt ccctcatgat tacgcttcgg catatgcggc
      601 attgaagcag tcggaatatg tggacagtat tgtcaaattc tcgcatttct cctgtgcgga
      661 cgaacccgaa agcggtataa cggaaataca gatggaagca ttcgatttgg gtactgaagg
      721 gctggaaggc gaagaaagcc ttgccaactc cgccgctatt ttgaatgttc ccgaagcacg
      781 cagggactgg gggcgcgcgg gcttggcgtt gtacggcatt tccccgttcg gaggcagcga
      841 tgacaggctg aaacccgtga tgaggctttc cacccgtatt ttcggcgaac gcgttttaca
      901 gccgcactcc cctatcggtt atggcgcaac attttatacc agcaaatcta cgcgggtcgg
      961 cctgattgcc tgcggttatg cggacggtta tccgcgccgt gccccaagca attcccccgt
     1021 cgccgtcgac ggtaaattga cccgggtcat cggcagggtc tctatggata tgatgaccat
     1081 cgagctggac gcttcacaag aaggtttggg acacgaggtc gaactgtggg gcgatacggt
     1141 caacatcaat accgttgccg aagcggccgg aaccatccct tacgaattga tgtgcaatat
     1201 caaacgtgca aaattcactt atatcgagta accgggttca aacgaaaatg ccgtctgaag
     1261 cctttcagac ggcataaatg cgttttgaca aaatcagtaa aagacattgc caaatagaaa
     1321 atactgataa tgcccacaat ctgaaacccc atccttcccg caaaaacgga aaatcaaaat
     1381 cagaaaccta aaatttcgtc attcccgcgc aggcgggaat ccggtttttt gagtttccgt
     1441 catttctgat aaattctcgt cgtttttcat ttctagattc ccgcctgcgc gggaatgaca
     1501 aaattaaagt ttcagaattt atttgaacaa caaactagat tcccactttc gcggggatga
     1561 cggcggatag gttttgttgt ttcggataaa ttcctgttgt tttttggttt ccagattccc
     1621 acctttaaaa gaatgacgta agaaagcaga aataaggaca cagggatttt ttaaatttgc
     1681 aatattcttt tctaaagaca ttttacccga tgcctataaa caaaaatgcc gtctgaagcc
     1741 tttcagacgg catttcccca tcaaaaccgc aatcagtttt tcatcgattg aaccggtgcg
     1801 ggaatcctgc cgccccggtt gacgaacact tcgcatgagc cttcttttac cggcattaca
     1861 ggcgcgtagc ccaacaggcc gccgaactcg acgctgtcgc cgacggtttt accggttacc
     1921 ggaataatgc gcacggcagt ggttttgctg ttgatcatgc cgatggcggc ttcgtcggca
     1981 atgatgccgg aaatggtgtg cgcgggtgtg tcgccgggaa cggcaatcat atccaagccg
     2041 accgaacaaa cggcggtcat ggcttcgagt ttgtccagcg tcagcacgcc tgcttcggcg
     2101 gcggcaatca taccttcgtc ttcggaaacg gggataaacg cgccactcaa acccccgacc
     2161 gcgctggaag ccatcatgcc gccttttttc acggcatcgt tcagcaatgc caaagctgct
     2221 gttgtgccgt gcgtaccgca gacgctcaag cccatttctt caagaatgcg tgccactgag
     2281 tcgccgacgg cgggggtcgg cgccagcgac aagtcgagaa taccaaacgg gatattcagc
     2341 atttttgagg cttcgcggcc gatgagttcg cccacgcggg taattttgaa agcagttttc
     2401 ttcactactt ccgcaacttc ggtcaatgtc gttgcatctg aattttccaa cgcggctttt
     2461 acgacacctg ggccggatac gccgacattg ataacggcat ccgcttcgcc cgaaccatga
     2521 aacgcgcccg ccataaacgg gttgtcttcc accgcgttgc agaacacgac aattttagcg
     2581 cagccgaaac cttcgggcgt gatttccgcc gtgcgtttga cggtttcgcc cgccagcttg
     2641 accgcatcca tattgatacc ggcacgcgta ctgccgatat tgatggagct gcacacaata
     2701 tcggtagtct tcatcgcttc gggaatggag cggattaaca cctcatccga aggcgacatc
     2761 cctttttgca ccaacgcgga aaaaccgccg ataaaagaca caccgatggc tttggcagct
     2821 ttatccaaag tttgcgccac gctgacgtaa gaatcagcat gggtggccgc cgcgatttgg
     2881 gcaatcggcg taacggaaat gcgctgattc acaatcggta cgccgtattt ggcagacaga
     2941 tattttgccg tagtgaccaa gtctttgccg actgtggtaa ttttattgta aatattttgg
     3001 ttcaacacat tgatatcgct gctgatgcag tcgtgcaaat caatgccgat ggtaatggtg
     3061 cggacatcaa aattctggtc ggcaaccatt ttgacggttt ctaaaatttc gccggattgg
     3121 atactcatca cattcctcca actcaaatgc ggtgcatcgc ttggaagatt tcttcgtttt
     3181 gcatacggat atcaagcgcg agttttttgc tctcttccgc aaacaaatcc aaaacctctt
     3241 gacgcgattt gctgcatttt gaagtgtcca ccaagataat catagtaaaa aaatcgtcca
     3301 tcagctgttg gctgatgttg agaatattga tttggttttc cgccaaaatt ttggaaacat
     3361 cgtacacgat gccgacgcgg tctttaccga tgacggtgat gactgaattg ttcacaggct
     3421 tactccttgc agatatccgt taaagtccga aattatacca ccgttggatt ttgaagaaat
     3481 attgtcaaca atatatacat acaaaatgcc gtctgaaact atttcagaca gcatcaagat
     3541 tcagggttcg attaaataac catccttatc ccactgggtt ttcctgacca acttgtcatc
     3601 ctgataaaca gcttcgctct ttttagaacc atcttcatac cactccaaaa ccaccccgtt
     3661 gcgttgatgg tggcggatag acagttccga gagtaatcgg ccgctttcat cccaagtcag
     3721 aattttggca ggctcatcgt tgaccataac catttccgtc ttgatactgc cgtcggcata
     3781 ccattgcttc catacgccgt ttgccttatt ttgcttaaac tggatttcgc tttccttgcc
     3841 gccgttacgg taatagcggt atcccgtacc ctcactcaag ccatttttat aaggcataac
     3901 ggcagatttt ttaccgttcg gataccagtt gacccactcc ccgtccggct tacccttgct
     3961 gaagcccccc gccatttttt tctgaccatt aaaatgccac aaaatcaaca taccgttttg
     4021 cagggtaggc acaaaagatt tgatttgcgt tgaagcaacg atataaggtt cagaatattt
     4081 cttcatcgac ggataataaa aatcctgcgc gtgcgcaata cccgccacca cactatattg
     4141 cctgatataa gcggcagaag acatcgtcgc cgtcagcttt ccgttctgat taaaataaac
     4201 agaataggtc tgcgccggca aagcggccga aaaacccaac aggacagttg aaaatacaat
     4261 ccgagataat tttttcattg caatagcgat ataaaaacaa ggctgtgttt tagtaatctg
     4321 ttgatttcaa ttatttgcaa gggaaaagac aattattttc cggttaggaa taaacctatt
     4381 ctattgaata tattgaagcc aagtacgcct atcaacacta tattaaaaca ctgccaaaaa
     4441 caattaactt ataaacaata tggtaaggat ttctctgcca agcatcaaac ccgagacaac
     4501 gtatcgtaaa aatgccgtct gaaaacaaat cgtcttcaga cggcatttcc ccttcaactc
     4561 actcttcacc caataactgc tcgcgcgtca agaggaaaac aaaaccgtcg cccccgctgg
     4621 tttccaacca agtaaaaggc aactccggat acgctgcttc caatacatcc ctgttatgcc
     4681 cgatttccac cagcaataca cctttaggat tcaaaaactt tgccgcattc agaagaatct
     4741 gcctggtggc atccaatcca tccgccccgc tgcccaatgc caattccggt tcgtgcaaat
     4801 actcttcagg caaagcctca accgactccg catccacata aggcggattg gaaacaatca
     4861 aatcataagt accttccaat ccttcaaaca aatccgtatg aataagccgg atgcgttctt
     4921 ccaaaccata atcttcgaca ttaatccctg ccacttccaa agcatccaag ctcacatcaa
     4981 ccgcatcaat ttgggcatca ggataatgat gcgccatctg aatggcaagg caaccgcttc
     5041 cggtgcaaag atccaaagca ttatgcacca gctcatcgta ttctatccaa ggacgaagtc
     5101 cgttacccaa caattcataa ataaaagaac gaggtatgat tacgcgctca tccacataga
     5161 aatcaaactc tccctgccat gcctggtgtg tcaaataagc ggctggaatg tgttcgacag
     5221 cacgacgctc aataaccgcc agcacttcct ctttttcagc ttccaagagt tttgcatcaa
     5281 gatatggggc aagcatatcc aaaggcaaat tcaaagtatg cagaatcaaa taagccgctt
     5341 catcatgcgc attatctgtt ccatgaccaa aaaagagccc tgcctcatta aaacggctga
     5401 ctgcaaaacg taaaatatcg cggatagtcg tcaattcttg tgctgcctga ttaaacataa
     5461 tatgaaccat tctgcgtata gatactttta attataacag aaacaacaag caaacctttt
     5521 catatcgcca aataaccacc caatctaccc atacaactac ataaatgccc gcgcgaaaac
     5581 catcgcccga acggaaacga caatggtcga cggtatgggc aatctgattg gctgggaaaa
     5641 aacggggctt gttgtcggta agcagtggat aaccgcaaaa gacgacaagg tgtccgatgt
     5701 ctgcaatgcc aacggcgaga tgggcgtaat cgggctttac gagcctttct cacacggcgc
     5761 attgacgata cccggtcatc cgaactgccg atgcgaggtt gtttccgtat cgggtggcga
     5821 attgggggaa tttgccgaaa aaaaggagct tcgtaaagcg gctatgcagt atgcgcggga
     5881 taactttatc ggcaaaagct atgtcaatga aaacagcggg catgaactga aggtaacttg
     5941 gcaaggtgtg aaacacgcta cgtcaaaggc aaatcaggcg gaattatcca tcatgacaaa
     6001 acttgatgac ttattgcgct acgcaaaata tgagggttct tattcggata ggaaaggtca
     6061 tcctaatatt attgcagcac ataagtatcg tgccgttgcc aaggttggga atgagtcttt
     6121 aaatatcggg gtgattgtaa gggaatttcc agacggacat aaacattacg accatttcat
     6181 cttgaaggat gagtaaagcc cttttgcagt gtcgttctgg agcggatagc gttaaggcaa
     6241 gtacacttcc agccttgaaa aagggcttta aattcagcat gccatttata caggcaggag
     6301 taaacccatg acaaagttat acgcagaaat cgccaagagg gaggcgcagg acgacggcac
     6361 ggtcaaggtt tggggttacg cttcaagcga ggaaatcgat tcggacggtg aagtcatcgc
     6421 gacggcagct atgaaggcgg cgattcccga ttatatgaag tttgacgcgg ggcgcgagat
     6481 gcacggctca aacgctgcgg gaacggcaat tgaaatcaac gttgaagacg acggcataac
     6541 ctttttcggt gctcatatca tcgaccccgt tgtcgtgtcg aaagtcaaaa caggcgttta
     6601 caaaggcttt tccatcggcg gcagcgttac cgcccgcgat gatttgaaca agtcgcaaat
     6661 cacgggcttg aagctgacgg aaatcagcct tgtcgagcgc cctgccaatc ccg
//
LOCUS       DAWITQ010000112         6694 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.112, whole genome shotgun sequence.
ACCESSION   DAWITQ010000112 DAWITQ010000000
VERSION     DAWITQ010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6694)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6694)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6694
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.112"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            100..669
                     /locus_tag="WIX18_001603"
                     /pseudo
     CDS             100..669
                     /locus_tag="WIX18_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691695.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase chain length factor"
     gene            901..1401
                     /locus_tag="WIX18_001604"
     CDS             901..1401
                     /locus_tag="WIX18_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003798052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238688.1"
                     /translation="MVFVNPLYYGREAGWFVWLAAAMCGLWLLRALTAKLPQQRYAAL
                     FITLFFAAVLVFGRHDSMYWYPVLVNLMMLAVFGGSLFAGQTVIEKLARLQQPDLPEK
                     AVRYTRRVTQVWCVFFIINGTLAALLARLGRYDWWAVYTGVIAYVLMGMLFAGEWLYR
                     KLVLKV"
     gene            1408..1923
                     /locus_tag="WIX18_001605"
     CDS             1408..1923
                     /locus_tag="WIX18_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2199 domain-containing protein"
                     /protein_id="HEZ5238689.1"
                     /translation="MYTCTSCGEKHEDMPAIGFTAPDPYNQLSEEERIAYQAECDSDF
                     CIIRYPDQTDRFIRAVLPIPIIGHEETLEYGVWVSVSEKSFNDYQSHFHDNPENVVYF
                     GMICNRLPPYESDTFGMHCNVVTQPDGQRPLLQLHQGSEHPLVRDFYHGIEYAEAQAR
                     IGAVSESDCSG"
     gene            1943..3421
                     /gene="ubiD"
                     /locus_tag="WIX18_001606"
     CDS             1943..3421
                     /gene="ubiD"
                     /locus_tag="WIX18_001606"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HEZ5238690.1"
                     /translation="MKYKDLRDFIAMLEQQGKLKRIAHPVSPHLEMTEIADRVLRAEG
                     PALLFENPVKPDGTRYGYPVLANLFGTPERVAMGMGADSVSKLREIGQTLAYLKEPEP
                     PKGIKDAFSKLPLLKDIWSMAPNVVKNAPCQEIVWEGENVDLYKLPIQHCWPEDVAPL
                     VTWGLTVTRGPHKKRQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEFRKLNPDTPYP
                     VAVVLGCDPATILGAVTPVPDTLSEYQFAGLLRGSRTELVKCIGNDLQVPARAEIVLE
                     GVIHPNETALEGPYGDHTGYYNEQDYFPVFTVERITMRENPIYHSTYTGKPPDEPAVL
                     GVALNEVFVPLLQKQFPEITDFYLPPEGCSYRMAVVSMKKQYAGHAKRVMMGCWSFLR
                     QFMYTKFIIVVDDDVNVRDWKEVIWAVTTRMDPVRDTVLVENTPIDYLDFASPVSGLG
                     GKMGLDATNKWPGETDREWGRVIKKDPAVTAKIDGIWEELGL"
     gene            complement(3485..5599)
                     /locus_tag="WIX18_001607"
     CDS             complement(3485..5599)
                     /locus_tag="WIX18_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HEZ5238691.1"
                     /translation="MDLLSVFHKYRLKYAVAVLTILLLAAVGLHASVYRTFTPENIRS
                     RLQQSIAHTHRKISFDADIQRRLLPRPTVILKNLTITEPGGDQTAVSVQETKIGLSWK
                     NLWSDQIQIEKWVVSSAELALTRDGKGVWNIQDLIDSQKRQASVNRIIVENSTVRLNF
                     LQEQLILKEINLNLQSPDSSGQPFESSGILVWGKLSVPWKSRGLFLSDGIGTPKISPF
                     HFEASTSLDGHGITISTTGSPSVRFNAGGADAAGLGLRADTSFRNLHLTAQIPTLALR
                     NNSIKIETVNGAFTAGGEYAQWDGSFKLDKANLHSGIANIGNAEISGSFKTPRHQTNF
                     SLNSPLVWTENKGLDAPRLYVSTLQDTVNRLPQPRFISRLDGSLSVPNLQNWNAELNG
                     TFDRQTVAAKFRYTHEDAPHLEAAVALQKLNLTPYLDDVRQQNGKIFPDTLAKLSGDI
                     EAHLKIGKVQLPGLQLDDMETYLHADKGHIALSRFKSGLYGGHTEGGISIANTRPATY
                     RLQQNASNIQIQPLLQDLFGFHSFSGNGDAVIDLTASGETRKELIRSLQGSLSLNISN
                     GAWHGIDMDNILKNGISGKTADNAAPSTPFHRFTLNSEISDGISRHIDTELFSDSLYV
                     TSNGYTNLDTQELSEDVLIRNAVHPKNKPIPLKITGTVDKPSITVDYGRLTGGINSRK
                     EKQKILEDTLLEQWQWLKPKEP"
     gene            5690..6583
                     /locus_tag="WIX18_001608"
                     /pseudo
     CDS             5690..6583
                     /locus_tag="WIX18_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218890.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
BASE COUNT         1433 a         1634 c         2025 g         1602 t
ORIGIN      
        1 tctttctgta cttttttctt tcatttgcag tgcgttatct tcatatttcg agggtaacat
       61 atctgctaat ctagtacagc ccctaaaatt taatccacta tagtttatgc ctcgcacgac
      121 ggggaaatgg cgcgcagttt cgatttgtgg ttggaactgt tgaaatcgca aatcgtgtcg
      181 ccgacttcgt tcggtttgtc ggtgcacaat gcaacggcgg ggtaatggtc gatattgagg
      241 cgggatatga gcgagcagac ggcattggcc gtgtgtgccg acggtgtgga aacggcattg
      301 gcggaagcgg catcactgtt ggaagaggga tgcgggtcgg ttttggtttt ggcggcggac
      361 gatccgctgc cggaaggata tgccgtatcg gcaacgcgcg cgccgtttgc ttatgctttg
      421 gcgatggttc tgaccaaagg gacgcgttac agtctgactt tatctgcttc ggacgatatg
      481 ccgtctgaag ccggtatgct gcccgaggca tattggagcg gtttggaatg ggtgcgcttt
      541 ctgctgaacg gcagtcggga atgccgccgg gtatatcgca atcgtgaatg gctgtggcag
      601 cccgcaagct gcaggctgaa gatttccgca atgtccgcac cgtcaacgac gtggtacagg
      661 cggtattgaa gattcaggcg ggctaatcgg gtatttctaa ttatttttca gacggcatgt
      721 ttttatcgga tgccgtctga aaacatttgt gcggattcaa aatgaaaccc ggttttttcg
      781 gacatatttt tctgaccgta ttaagcattg cctatcccgc tttgtggtat agtggattaa
      841 caaaaatcag gacaaggcga cgaagccgca gacagtacgg caaggcgagg caacgctgta
      901 ctggtttttg ttaatccact atattacggc agggaggcgg gctggtttgt ctggctggcg
      961 gcggcgatgt gcgggttgtg gctgctgcgc gccctgactg ccaaactgcc ccaacagcgt
     1021 tatgcggctt tgtttattac actgtttttt gccgcagtat tggtgttcgg gcggcatgat
     1081 tcgatgtatt ggtatcccgt cctcgtcaat ctgatgatgt tggcggtgtt cggcggcagc
     1141 ctgtttgcag ggcagacggt gattgaaaaa cttgcgcggc tgcaacagcc cgacctgcct
     1201 gaaaaagccg tgcgctatac ccgccgggta acgcaggttt ggtgcgtatt ttttataatc
     1261 aacgggacgc ttgccgcttt gttggcacgg ttggggcgat atgattggtg ggcggtttat
     1321 acaggcgtga ttgcctatgt attgatgggg atgctgtttg ccggcgaatg gctttaccgc
     1381 aaactcgttt tgaaagtctg aaaccttatg tacacttgca cttcctgcgg cgaaaaacat
     1441 gaagatatgc ccgcaatcgg ctttaccgcc cccgatccct ataatcaact cagtgaagaa
     1501 gaacgcattg cttatcaagc agaatgcgat tctgatttct gcatcatccg ctatcccgac
     1561 caaaccgacc gctttatccg cgcggtgctg ccgattccga ttatcgggca tgaggaaacg
     1621 ctggaatatg gcgtgtgggt gtccgtcagc gaaaagagtt ttaacgacta tcaaagccac
     1681 tttcacgaca atccggaaaa tgtcgtttat ttcgggatga tctgcaaccg gctgccccct
     1741 tacgaatccg acaccttcgg tatgcattgc aatgtcgtta cccaacccga tggtcaacgc
     1801 cctttgctgc aactccatca aggcagcgaa catccgctgg tacgcgactt ttatcacggc
     1861 atagaatatg ccgaggcaca ggcaaggata ggggcggtat ccgaatcgga ttgctcagga
     1921 taaaaggaca aaaaggatga atatgaaata caaagacctg cgcgacttca tcgccatgct
     1981 cgagcagcag ggcaaactca aacgcatcgc gcaccccgtt tccccgcatt tggaaatgac
     2041 cgaaatcgcc gaccgcgtgc tgcgcgccga agggccggcg ttgctgtttg aaaacccggt
     2101 taagcccgac ggtacgcgct acggttatcc tgtgttggca aacctgttcg gcacgcccga
     2161 acgtgtggcg atgggcatgg gcgcggacag cgtgtccaag ctgcgtgaaa tcgggcagac
     2221 gctggcgtat ttgaaagaac ccgaaccgcc caaaggcatc aaagatgcgt tttccaaact
     2281 gccgctactg aaagacattt ggagcatggc gccgaacgtg gtgaaaaacg cgccgtgtca
     2341 ggaaatcgtg tgggaaggcg aaaacgttga tttgtataaa cttccgattc agcattgctg
     2401 gccggaagac gttgcgccgc tggtaacatg gggcttgacc gtaacgcgcg ggccgcacaa
     2461 aaaacgccaa aatctcggca tttaccgcca acaactcatc ggcaaaaaca agctgattat
     2521 gcgctggctg tcgcatcgcg gcggcgcgtt ggattatcag gaattccgca aactcaatcc
     2581 cgatacgccg tatcccgtcg ccgtcgtgct cggctgcgac cctgccacca ttttgggcgc
     2641 ggtaacgccc gttcccgata ccttgagcga ataccagttt gccggactgc tgcgcggttc
     2701 gcggacggag ctggtgaaat gtatcggcaa cgatttgcaa gtgcctgcac gcgcagaaat
     2761 cgtgctggaa ggtgtgattc atccgaacga aaccgcgttg gaaggcccgt acggcgacca
     2821 cacgggctat tacaacgagc aggattattt ccctgtgttt acggtcgaac gcatcaccat
     2881 gcgcgaaaac ccgatttacc attcgaccta cacaggcaaa ccgcccgatg agcctgccgt
     2941 tttgggcgtg gcgttgaacg aagtgttcgt accgctcttg caaaagcagt tccccgaaat
     3001 caccgatttt tacctgccgc ccgaaggctg ctcctaccgc atggcggtgg tgagcatgaa
     3061 aaaacagtac gccggacacg ccaagcgcgt gatgatgggc tgctggtcgt tcctgcgcca
     3121 gtttatgtac accaaattca tcatcgtggt ggatgacgat gtgaacgtgc gcgactggaa
     3181 agaagtcatc tgggcggtaa ccacgcgcat ggaccccgtg cgcgacaccg ttttggtgga
     3241 aaacacgccc atcgactatc tcgacttcgc cagcccggtc agcggactcg gcggcaaaat
     3301 gggcttggac gcaaccaaca aatggccggg agaaaccgac cgcgaatggg gacgcgtcat
     3361 caaaaaagac cctgcggtta cggctaagat tgatgggatt tgggaggaat tggggttgta
     3421 ggttttacgg tctgccgtct gaagcgcggg ggcgtttcag acggcatttt tgtacgcagg
     3481 atgtttacgg ttctttaggt ttgagccact gccattgttc cagcagggtg tcttcgagga
     3541 ttttctgttt ctctttgcgc gaattgatgc cgccggtcag cctgccgtaa tcgacggtaa
     3601 tggacggctt gtccaccgta ccggtgattt tcaggggaat cggtttgttt ttcggatgga
     3661 cggcgttgcg gataaggaca tcttcagaca attcctgcgt atccagattg gtatagccgt
     3721 tgctggtaac atagaggctg tcggagaaga gttcggtatc gatgtggcgg ctgatgccgt
     3781 ctgaaatttc gctgttgagc gtgaatcggt ggaagggtgt gctgggtgcg gcattgtcgg
     3841 cagttttgcc cgaaatgccg tttttcagga tattgtccat gtcgataccg tgccatgcac
     3901 cgttggaaat attcagcgac aggctgccct gaagcgagcg gataagctct tttcgggttt
     3961 cgccgctcgc ggtcaggtcg atgaccgcat cgccgttgcc gctgaagctg tggaagccga
     4021 acaggtcttg cagcagcggt tggatttgga tgttgcttgc attctgttgc aggcggtaag
     4081 tggcgggacg ggtgttggcg atgctgatgc cgccttcggt atggccgccg taaagccctg
     4141 acttgaaacg gctgagcgcg atatggcctt tgtcggcgtg gaggtaggtt tccatatcgt
     4201 ccagttgcag gccgggaagt tggacttttc cgattttcag gtgcgcctcg atgtcgccgg
     4261 acagcttggc gagggtgtcg ggaaatattt tgccgttttg ttgccgcacg tcgtcaagat
     4321 agggggtcag gttcaatttt tgcagtgcga cggcggcttc cagatgcggt gcgtcttcat
     4381 gtgtgtatct gaatttcgcg gcaacggttt ggcggtcgaa tgtgccgttt aattcggcat
     4441 tccaattttg cagattcggt acggacagcg aaccgtcgag ccggctgatg aaacggggtt
     4501 gcggcaggcg gttgacggta tcctgaaggg tcgatacata caggcgcggc gcgtccagcc
     4561 ctttgttttc cgtccatacg agcggcgaat tgagggagaa gttggtctgg tggcgcggtg
     4621 ttttgaagct gccggagatt tcggcgttgc cgatgttggc gatgccggag tgaaggttgg
     4681 ctttgtcgag tttgaacgaa ccgtcccatt gggcatattc gccgccggcg gtaaatgcgc
     4741 cgttgacggt ttcaatttta atgctgttat ttctgagtgc cagcgtaggg atttgggcgg
     4801 tcaggtggag gttgcggaag gaagtgtctg cacgcaggcc gaggccggcg gcatccgctc
     4861 cgccggcgtt gaagcggaca gaagggctgc cggtggtgga aatggtaatg ccgtgtccgt
     4921 ccagcgaagt ggaagcttca aaatggaacg gtgagatttt gggcgtgccg atgccgtctg
     4981 aaaggaacag ccccctgctt ttccacggga cggacagctt tccccaaacc agtatgcccg
     5041 aactttcaaa cggctgcccc gacgaatcgg gggattgcag gttgaggttg atttccttca
     5101 ggataagctg ttcctgcagg aaattgaggc ggacggtgct gttttcgacg ataatgcggt
     5161 tgactgaggc ttggcgtttt tggctgtcga tcaggtcttg gatgttccaa acacctttcc
     5221 cgtcgcgcgt cagggcaagt tccgcactcg aaaccaccca tttttcaatc tgtatctgat
     5281 ccgaccacag gtttttccag ctcaatccga ttttggtttc ttggacggaa acggcagtct
     5341 ggtcgccgcc gggttcggta atggtcaggt ttttcaggat gacggtcggc cggggcagga
     5401 gcctgcgctg aatgtccgca tcaaacgaga ttttccggtg tgtgtgtgca atgctttgtt
     5461 ggaggcggct gcggatgttt tcaggcgtga aggtgcgata tacggaagcg tgcagcccga
     5521 ctgccgccaa aagcagtatc gtcagcacgg ccaccgcata tttcagacgg tatttgtgga
     5581 aaaccgataa taaatccata gcccgaacaa tctgtaaaac acgccacagt ataacacggc
     5641 ttgcaaaaat cctattttgg gcaggccgtt tcttgtgtca ggaggaaata tgattattgt
     5701 catgagcagg cgtgccgccg aagcggacat tgccggcgtt gtcgccttta tccgcagcag
     5761 aggtctgcga gaacacattt ctcacggcga cgagcgtacc gtcatcggcg caatcggcga
     5821 cgatagggtt ttgagcgtca gggaggtgca gacgctgccg gaggtcgaga aagccgtccg
     5881 cattttggat acatggaaaa ccgtcagtcg ggaaaatcgg gcggaagaca gccgcgttgc
     5941 cgccaaaggc gtggctttcg gcggcgggga aaccgtctgt atcgccgcag aaccgtcagt
     6001 atggcgcaat gcggatgcag tgtttctgga tccgtttttc acttcggcaa acttatacga
     6061 cacttcaagt gcggatgaag ggcgaggacg gtgcagacgg ttggcggaac agaccgcatc
     6121 ggcgcatggc gcagggaaac ccgtattggt gcgcgtccgc aacgtccgcc atgtcgaagc
     6181 ggctttgaat gcgggggcgg acatcctgta tttgggcggc gggctgatgt ccgatcttgc
     6241 cgtattgaat gaagccggaa gcctgaacat tcccttggtg ctgtgtaaag acaagcacca
     6301 ttctgccgaa gattggttga atgccgcaga atatgtcgtc tcgcgcggca accgccacct
     6361 gattctgggc gagtcgggcg tgttgagcca taccaaagac catccctacc gtttggatgt
     6421 cgaatccatc gtgaaagtcc gccaaatcag ccatctgccc gtgattgcga atattacggg
     6481 attatgaaac cgcgatatgc cgcaggaaat cctgtacggc ttggcaaagg cggcaggcgc
     6541 gtgcggaatc gtcggaacct gttttgaaaa gtcgggcgga tagcaggcat accggcagat
     6601 tcaaaggcgg agcagacatt cggacaacat gccgtctgcc gcccgaatag cggtgccgtc
     6661 tgaagcgcac aagacggttt cagacggcat ataa
//
LOCUS       DAWITQ010000113         6593 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.113, whole genome shotgun sequence.
ACCESSION   DAWITQ010000113 DAWITQ010000000
VERSION     DAWITQ010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6593)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6593)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6593
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.113"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(150..665)
                     /locus_tag="WIX18_001609"
     CDS             complement(150..665)
                     /locus_tag="WIX18_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238692.1"
                     /translation="MSAFRKILLIISCLLIASCSFVETIFYMAISPEPVVVDFPLGKK
                     TKRSIELKQKIGKPYAISLGTNFIHYDPKQGERWIDDKLNYPYNISVKIFKVEEDGKK
                     LIIDELLTERSRKLGGGVFGAGGKYSMYIYDFYLPEGEYLFEISDNSEYIPLYDEINN
                     SIRIVVNARIQ"
     gene            complement(926..1483)
                     /locus_tag="WIX18_001610"
     CDS             complement(926..1483)
                     /locus_tag="WIX18_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FrpA"
                     /protein_id="HEZ5238693.1"
                     /translation="MENNKAKSDDNSVSIEFIQDFITASTDVINLSYENFRKNFYTQM
                     STDSTNYAAKHESLGKSVQRELQKTQSQLRQVVRKMQSKYNINNKARAAEISLLRQMQ
                     SQFSRKDVNKNLGNGNTLAQQGSYTKKDGTTAQAGDLLLAADNLHSRLTDKMLSISHV
                     RENTISPFVLGCLKQITINAYHYLK"
     gene            complement(2021..3028)
                     /locus_tag="WIX18_001611"
     CDS             complement(2021..3028)
                     /locus_tag="WIX18_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEZ5238694.1"
                     /translation="MYSNNAITNNRNNITLGAYRDAIISIFSDENVVRAIGTINSMYE
                     EYLTLSHKIDQRAFLREGERLSAKAREFQRTAEEAQKSLKEGIGRAASKFRGNSKEAF
                     VARKVQSDLQKALNASNYNKQQYARRAATALENASKSKVMAANLGKFTYGATVAMGTL
                     SMGSAWWKALDEEGNWSDVGLSSASFLGGLMGFQWGAALGVGAFGLLTGGAGWLVVGT
                     IIGGGSGAWWGSLGAEKAWRWFEDFLNLNRSDKFHVTDPLALDLDGDSIETVATKGLA
                     GALFDHRSQGIRTATGWIAAYDGFPVRKLNSNGGIISTTDTIFQSLHTWLDHQPNDTC
                     H"
     gene            4302..6434
                     /locus_tag="WIX18_001612"
     CDS             4302..6434
                     /locus_tag="WIX18_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HEZ5238695.1"
                     /translation="MSIVSAPLPALSALIILAHYHGIAANPADIQHEFCTSAQSDLNE
                     TQWLLAAKSLGLKAKVVRQPVKRLAMATLPALVWCDDGNHFILAKTDGGGEHAQYLIQ
                     DLTTNKSAVLSFAEFSNRYSGKLILVASRASVLGSLAKFDFTWFIPAVIKYRRLFFEV
                     LVVSVVLQLFALITPLFFQVVMDKVLVHRGFSTLDVVSVALLVVSLFEIVLGGLRTYL
                     FAHTTSRIDVELGARLFRHLLSLPLSYFEHRRVGDTVARVRELEQIRNFLTGQALTSV
                     LDLAFSFIFLAVMWYYSSTLTWVVLASLPAYAFWSAFISPILRTRLNDKFARNADNQS
                     FLVESITAVGTVKAMAVEPQMTQRWDNQLAAYVASGFRVTKLAVVGQQGVQLIQKLVT
                     VATLWIGARLVIEGKLTVGQLIAFNMLSGQVAAPVIRLAQLWQDFQQVGISVARLGDI
                     LNAPTENASSHLALPDIRGEITFEHVDFRYKADGRLILQDLNLRIRAGEVLGIVGRSG
                     SGKSTLTKLVQRLYVPEQGRVLVDGNDLALAAPAWLRRQVGVVLQENVLLNRSIRDNI
                     ALTDTGMPLERIIEAAKLAGAHEFIMELPEGYGTVVGEQGAGLSGGQRQRIAIARALI
                     TNPRILIFDEATSALDYESERAIMQNMQAICANRTVLIIAHRLSTVKTAHRIIAMDKG
                     RIVEAGTQQELLAKPNGYYRYLYDLQNG"
BASE COUNT         1880 a         1345 c         1289 g         2079 t
ORIGIN      
        1 atttttttat ctctagccga atacagttca acccaaacgt acccgtcttg gatacacccc
       61 ctcttgtttc agtggcgtac cctgcttcgc aaattttaca gttatcgcat aataatcagc
      121 cataagtaac cccacatttc tagaaaaatt tactgaattc gtgcattaac tactattctt
      181 atagaattat ttatttcatc gtaaagtgga atatattcac tattatcaga aatctcaaat
      241 aaatattccc cttccggcaa ataaaaatca taaatataca tactgtattt tcccccagct
      301 ccaaatactc cgcctcctaa ttttctactt ctctctgtaa gcaactcatc tataataagt
      361 tttttaccat cttcttccac tttaaatatt ttaaccgata tattatatgg atagtttaac
      421 ttatcatcaa tccacctctc cccctgtttt ggatcataat gtataaaatt agttcctaac
      481 gatattgcat aaggtttacc aattttctgt ttgagttcaa tagatctttt tgttttttta
      541 ccaagaggaa agtctaccac aacaggttct gggctaatag ccatataaaa aatagtttca
      601 acaaaactgc agctagcaat caataggcaa gatattatta ataatatttt tctaaatgca
      661 gacataataa aaatttccaa aaaatccata tcagaatata ctaattattt gtataattaa
      721 taaggaagag aaaaattcaa aacggctatg agatttccgc ctgaaaataa tgaaataaaa
      781 gtccatagta atgaataata gctttatcag acccccttta atgcaaacat agagaatact
      841 tcccttgaag cactatcaat ttctacttaa ctaaaactct agctctattt ctaaaatttt
      901 gtcaaaaata gttaaatact tttatttatt ttaaataatg atatgcattt atggttattt
      961 gttttagaca gcctaaaaca aacggggaaa tcgtgttttc ccgaacatgg ctaatggata
     1021 gcattttgtc cgtgaggcgg ctgtgcaggt tgtcagcagc caacagcaaa tcgcctgctt
     1081 gcgcggttgt gccgtctttt ttggtgtagc tgccttgttg agccaaagtg ttgccgttac
     1141 caagattttt gtttacatct tttcgagaaa attggctttg catttgcctt aacaaagata
     1201 tttctgctgc tcgtgcttta ttatttatat tatatttact ctgcattttt cttacaactt
     1261 gtctcaactg actttgtgtt ttttgtaatt cacgttgtac cgattttcct aaactttcat
     1321 gtttggctgc ataattggta gaatcagttg acatttgtgt ataaaaattt ttacgaaaat
     1381 tttcgtaact cagattaatt acatccgtac ttgcagttat aaaatcttgt ataaattcaa
     1441 tagaaactga attatcatca gatttggctt tgttattttc catattaagc ctctcttaat
     1501 ttgaaaaaat taacataaac atttaaaaat aaaacaaaat tatataataa aaaaaataat
     1561 gagaatataa aggataaaaa gagagttaag ttatttaatc ggacttgttc tctataaatc
     1621 ataaggcacc aaataagcca taataaattt agtaaataaa aactgcttat acccaacttt
     1681 cttttcttgg aacctattat tatttcaact ctggatgaaa aaatagaatt taaaaatttt
     1741 tttctttgat atatcgttaa tatctcccta gtttttctta aaaaaaatat aatcatatat
     1801 atactacaca acattggtaa taaataaatt aaaagcgaaa ggtaattaaa ttgataattg
     1861 taaattatat aataaacaac atacgaagaa aaaattatta tagatgattt actatacgaa
     1921 taaaaaaata tcctacctag cccgaacctt cttataattt gtactatgtg atcattcatt
     1981 tcaatatcca tttaagcttt caattaattt tctatatttt tcaatggcat gtatcatttg
     2041 gttgatgatc aagccatgta tgcaaagatt ggaatatggt atctgtcgtg ctaataatgc
     2101 ccccgttact gtttaatttg cgcacaggaa aaccgtcata tgcagcaatc cagcccgtgg
     2161 cggtgcggat accttggctg cggtggtcga acaatgcacc tgcaaggcct ttggtggcaa
     2221 cggtttctat actgtcgcca tctagatcta gggcaagggg gtcggttacg tggaatttgt
     2281 cgctgcggtt aagatttaag aaatcttcaa accatctcca agctttttca gctcctaatg
     2341 atccccacca agctcctgag ccacctccaa ttatagttcc aactactagc caacctgcgc
     2401 caccagtaag taaaccaaaa gccccaacac ccaaagccgc accccattgg aagcccatta
     2461 gcccacccaa aaaagaagct gatgagagac caacatcact ccaatttcct tcttcatcca
     2521 aggctttcca ccaagcactt cccatactca aagttcccat ggcaacagtt gccccataag
     2581 taaacttacc caaattcgct gccataactt ttgattttga agcattctct aacgctgttg
     2641 ccgcacgtct tgcatattgc tgcttgttat agttgctagc attcaatgct ttttgcaaat
     2701 cactttgtac ttttcttgca acaaatgcct cctttgaatt accacgaaat ttactagcag
     2761 ctcttccaat tccttctttt aagctttttt gtgcctcttc tgctgtgcgt tggaattctc
     2821 ttgccttagc agacagacgc tcaccctccc ttaaaaatgc tcgttgatct atcttgtgcg
     2881 aaagggtcaa atattcttcg tacattgagt taatcgtacc aatcgcccta accacatttt
     2941 catcagaaaa tatggaaata atagcatccc tatacgcacc tagagtaata ttgtttctat
     3001 tattagttat agcattattc gaatacataa tagcacctcc aaacttagaa ctgaatacgt
     3061 ttatattctc tgtgtaataa tatcaaataa ttaattaatg gataagtaag tccgaaaaaa
     3121 taacaactaa aataagcaat atactgattc tctcctttat taattagata tattgaaaaa
     3181 caaataaaaa ataaacagaa aacattcatg tgaaaaagcc acctcatatt cttatttata
     3241 agtttaaaat aactaggcat tgtatattta aaaatcggta catccaacgg aaacaaacca
     3301 cataaaaatt tttctttatt ctttattaaa gacatagttt tatttttcaa aattagtcca
     3361 gataatatac taacaattac tattaaaaca ataagcacag cgtaattttt tataaaattc
     3421 attaaaataa taacgaaaat actaaataga ttacatactg taaattgaaa tataaaatat
     3481 tcagtattta atccattttc aaccgcgagt tttttaaaat atccttgctc gaaaaaatta
     3541 aaaaaatcca ttaatacttt cctctcaaga aaactaattt tagtttagtt aagataaaat
     3601 gcaatattac cttttctcca taaaagtatg gagcttatat acataaatta tgtgcgaggt
     3661 agcctgaaaa atatccaata caagatagta ggagatgttt cccttatcac tattggccaa
     3721 tacccaattg gcaggcactc tatttccaaa attttctcaa gaatagttaa atattattaa
     3781 ttagtttaaa aacaataaca tacgtttgta tttatccgtt ttggtctgcc tgaaacagac
     3841 tctatgtcca tacacggaca tgtagacagt ttccttgtta ttttggttgc tcgtcattag
     3901 tgatgatact ttactcctct cttaaaaaat cgtcaagaac tgttatcaat ctttaaagtc
     3961 ttttttaaac aaatatatat acgttcaggc tgtctgaaac acaaaaaaat gatgttaccc
     4021 gaccgtgaca gagtcggggc agccggtacc ttaaccctgc accttaaccc tgtgccttaa
     4081 cggtatgcag gaggcacgag aggtgcgagg catcctcatc taactcgatt cctaagccgt
     4141 tttaccttcc tgaaacgaga acttttccat actttctctt tacaattccc atatacatcc
     4201 ttacaatgtg ttctgctgtt ttatttatat atttctttct actgaatata ttccttttcc
     4261 agccagccgt tatccacatc caatctaact atattttatt tatgtctatc gtatccgcac
     4321 cgctccccgc cctttccgcc ctcatcatcc tcgcccatta ccacggcatt gccgccaatc
     4381 ctgccgatat acagcatgaa ttttgtactt ccgcacagag cgatttaaat gaaacgcaat
     4441 ggcttttagc tgccaaatct ttgggattga aggcaaaggt agtccgccag cctgtcaaac
     4501 gtttggctat ggcgacttta cccgcattgg tatggtgtga tgacggcaac cattttattt
     4561 tggctaaaac agacggtggg ggtgagcatg cccaatatct aatacaggat ttaactacga
     4621 ataagtctgc ggtattgtct tttgccgaat tttctaacag atattcgggc aaactgatat
     4681 tggttgcttc ccgcgcttcg gtattgggca gtttggcaaa gtttgacttt acctggttta
     4741 ttccggcggt aatcaaatac cgccggttgt tttttgaagt attggtggtg tcggtggtgt
     4801 tgcagctgtt tgcgctgatt acgcctctgt ttttccaagt ggtgatggac aaggtgctgg
     4861 tacatcgggg attctctact ttggatgtgg tgtcggtggc tttgttggtg gtgtcgctgt
     4921 ttgagattgt gttgggcggt ttgcggacgt atctgtttgc acatacgact tcacgtattg
     4981 atgtggaatt gggcgcgcgt ttgttccggc atctgctttc cctgccttta tcctatttcg
     5041 agcacagacg agtgggtgat acggtggctc gggtgcggga attggagcag attcgcaatt
     5101 tcctgaccgg tcaggcgctg acttcggtgt tggatttggc gttttcgttt atctttctgg
     5161 cggtgatgtg gtattacagc tccactctga cttgggtggt attggcttcg ttgcctgcct
     5221 atgcgttttg gtcggcattt atcagtccga tactgcggac gcgtctgaac gataagttcg
     5281 cgcgcaatgc agacaaccag tcgtttttag tagaaagcat cactgcggtg ggtacggtaa
     5341 aggcgatggc ggtggagccg cagatgacgc agcgttggga caatcagttg gcggcttatg
     5401 tggcttcggg atttcgggta acgaagttgg cggtggtcgg ccagcagggg gtgcagctga
     5461 ttcagaagct ggtgacggtg gcgacgttgt ggattggcgc acggctggta attgagggca
     5521 agctgacggt ggggcagctg attgcgttta atatgctctc gggacaggtg gcggcgcctg
     5581 ttatccgttt ggcgcagttg tggcaggatt tccagcaggt ggggatttcg gtggcgcgtt
     5641 tgggggatat tctgaatgcg ccgaccgaga atgcgtcttc gcatttggct ttgcccgata
     5701 tccgggggga gattacgttc gaacatgtcg atttccgcta taaggcggac ggcaggctga
     5761 ttttgcagga tttgaacctg cggattcggg cgggggaagt gctggggatt gtgggacgtt
     5821 cggggtcggg caaatccaca ctcaccaaat tggtgcagcg tctgtatgta ccggagcagg
     5881 gacgggtgtt ggtggacggc aacgatttgg ctttggccgc tcctgcctgg ctgcggcggc
     5941 aggtcggcgt ggtcttgcag gagaatgtgc tgctcaaccg cagcatacgc gacaatatcg
     6001 cgctgacgga tacgggtatg ccgctggaac gcattatcga agcagccaaa ctggcgggcg
     6061 cacacgagtt tattatggag ctgccggaag gctacggcac cgtggtgggc gaacaagggg
     6121 ccggcttgtc gggcggacag cggcagcgta ttgcgattgc ccgcgcgtta atcaccaatc
     6181 cgcgcattct gatttttgat gaagccacca gcgcgctgga ttatgaaagt gaacgagcga
     6241 ttatgcagaa catgcaggcc atttgcgcca accggacggt gctgattatc gcccaccgtc
     6301 tgtccaccgt taaaacggca caccggatca ttgccatgga taaaggcagg attgtggaag
     6361 cgggaacaca gcaggaattg ctggcgaagc cgaacggata ttaccgctat ctgtatgatt
     6421 tacagaacgg gtagaaggcg ggggatgggc gtgtaggctg cttttttcgt aacgttctgc
     6481 gttttcagac cgtcgtttac tgggtttact gactgaaatg aaaccaaagt gcaggctgcc
     6541 ggaaagactt tttctgtctt tttaggcagc ctgcacttct ttttcactca tct
//
LOCUS       DAWITQ010000114         6491 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.114, whole genome shotgun sequence.
ACCESSION   DAWITQ010000114 DAWITQ010000000
VERSION     DAWITQ010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6491)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6491)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6491
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.114"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..138
                     /locus_tag="WIX18_001613"
     CDS             <1..138
                     /locus_tag="WIX18_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238696.1"
                     /translation="QRQAGRWAEAHPTMDTTDPHSAAANQSSLHIFRQPNPNIKPFIV
                     N"
     gene            117..229
                     /locus_tag="WIX18_001614"
                     /pseudo
     CDS             117..229
                     /locus_tag="WIX18_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            260..3391
                     /locus_tag="WIX18_001615"
     CDS             260..3391
                     /locus_tag="WIX18_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HEZ5238697.1"
                     /translation="MNLETKPIAETPNFIVLDQYEKIEQSGSYQSENQLEAELIADLQ
                     NQGYEYRKDLNSQSRLLENLRAQLQRLNDVAFSDGEWARFLTEYLDRPSENITDKTRK
                     IHDDHIYDFAFDDGRLKNIYLLDKKNLARNHVQLINQFEQTGTHANRYDVTVLVNGLP
                     LVQIELKKRGVAVREAFNQVHRYSKESFNSENSLFKFLQIFVISNGTDTRYFANTTKR
                     DKNSFDFTMNWARSDNHPIKDLKDFTATFLQKSVLLGVLLHYSVFDANDTLLIMRPYQ
                     IAAAERILWKINSSAQAKNWSGPESGGYVWHTTGSGKTLTSFKAARLATESAFIDKVF
                     FVVDRKDLDYQTMKEYQRFSTDSVNGSESTAGLKRNLEKDDNKIIVTTIQKLNNLMKS
                     EDNLPVYHQQVVFIFDECHRSQFGEAQKNLKKKFKKFCQFGFTGTPIFHDHIVDGKLI
                     MKGNALGSESTESVFGRQLHSYVITDAIRDEKVLKFKVDYNDVRPQFKAVEAEQDEKK
                     LSAAENRQALLHPERIREITQYILNQFRQKTHRLNAGGKGFNAMFAVSSVDAAKCYYE
                     AFKTQQAGSLHPLKVATIFSFAANEEQNAVGEIADETFEPEAMDSSAKEFLQAAINDY
                     NACFKTNFGTDSKAFQNYYRDLAKRVKNQEVDLLIVVGMFLTGFDAPTLNTLFVDKNL
                     RYHGLMQAFSRTNRIYDATKTFGNIVCFRDLEQATIDAITLFGDKNTKNVVLEKSYEE
                     YMNGYTDSQTGEARRGYLDVAKELHERFPDPDKIETEKDKKDFAKLFGEYLRAENVLQ
                     NYDEFAALRELQSVDAADEDAMKAFQEKYYLSDEDVQEMRQVPMPSERAVQDYRSAYN
                     DIRDWLRRQKAGEQKEQSKIDWDDVVFEVDLLKSQEINLDYILQLIFEHHKKIKGKAE
                     LVEEIRRIIRASIGHRAKESLIVDFINDTDLDKVPDVPAILETFYTYAQEVMRNEAAE
                     LIAAEGLNETAAKRYLISSLKRGYASENGTELTETMPKMSPLNPQYLTKKQSVFQKIA
                     AFVEKFAGIGTDI"
     gene            complement(3431..5722)
                     /gene="clpA"
                     /locus_tag="WIX18_001616"
     CDS             complement(3431..5722)
                     /gene="clpA"
                     /locus_tag="WIX18_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HEZ5238698.1"
                     /translation="MLAPELEQILQQLYREARKAHYEFISLEHLLLVLIEEDASVPNV
                     LKLCGADLKVVSEQLAASVAENTPLIPEHLLDTVETRPTLGFQRVMQRAMVHTQSAGK
                     AAVEPLDVLVALMSETDSHTVYFLKLQSVTRFEVLRCIAHGSPDEDEDDGNYSSDGMD
                     DDNENRTKPGKNPLSAYTVNLNAEVKAGRIDPLIGRKHEMERLVQILCRRRKNNPLLV
                     GEAGVGKTALAEGLAHQIVNGGIPDALKDAEVYALDMGSLLAGTKYRGDFEARVKSVL
                     KQLEKIPHAILFIDEIHTIIGAGSTSGGTMDASNLLKPALAKGSLRCIGATTYDEYRT
                     IFDKDHALSRRFQKIDVVEPTVSETVQILRGLKPMFEAFHQVRYTQGALEAAAELSAR
                     YINERFLPDKAIDVMDEAGAAQRILPKSKQKKVIGKAQIETVIAKVARIPEKTVSHDD
                     KQVLQFLGRDLKNMVYGQENAIDALVAAVKMSRSGLALPDKPIGSFLFSGPTGVGKTE
                     AAKQLAYSLGVPLQRFDMSEYMERHAVSRLIGAPPGYVGFEQGGLLTEAVNKQPHCVL
                     LLDEIEKAHPDIFNVLLQVMDAGKLTDNNGKSADFRNVILIMTTNAGAESLSRPSLGF
                     TAKRERGDEMQAINKLFTPEFRNRLDAIIPFAPLSEPIIVKVVDKFLLQLEHQLLDKK
                     VEAEFTSALHKYLAEKGFDPQMGARPMHRLIQEKIRKPLADELLFGKLSDGGFVRIDW
                     DAAKEEAVLKFKKSKVKIKTASA"
     gene            complement(5724..6026)
                     /gene="clpS"
                     /locus_tag="WIX18_001617"
     CDS             complement(5724..6026)
                     /gene="clpS"
                     /locus_tag="WIX18_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HEZ5238699.1"
                     /translation="MTAQHQSDTLLHRLNTLPPKRYGVFLLNDDYTTMEFVVEILTEI
                     FMLGQEQAVAVMLLVHHEGKGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEEI"
     gene            6269..6472
                     /locus_tag="WIX18_001618"
     CDS             6269..6472
                     /locus_tag="WIX18_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEZ5238700.1"
                     /translation="MATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMEGFKTLKE
                     GQRVSFDVTTGPKGKQAANIQAA"
BASE COUNT         1616 a         1573 c         1779 g         1523 t
ORIGIN      
        1 caacggcagg cggggcggtg ggctgaagcc catcctacga tggacacaac cgacccgcat
       61 tccgccgcag ccaaccaaag cagcctgcac attttcaggc agcccaatcc gaacatcaaa
      121 ccgtttatag tgaattaaat ttaaatcagg acaaggcggc gagccgcaga cagtacaaat
      181 agtacggcaa ggcgagccaa cgcagtaccg gtttaaattt aattcactat aaaacccgac
      241 accgcaaagg acgacccata tgaacctcga aactaaaccc atcgccgaaa cgccgaattt
      301 catcgtgctc gaccaatatg aaaaaatcga acagtcgggc agctaccaat cggaaaacca
      361 gttggaagcg gagttaatcg ccgatttgca gaatcagggt tacgaatacc gcaaggattt
      421 gaacagccaa agcaggctgc tggaaaacct gcgcgcgcag ttgcagcggc tgaacgatgt
      481 ggcgttttca gacggcgaat gggcgcggtt tttgacggaa tatctggaca ggccgtctga
      541 aaacattacc gataaaaccc gaaaaatcca cgacgaccat atttacgatt tcgcttttga
      601 tgacggccgt ctgaaaaata tttatctgct ggacaaaaaa aaccttgccc gcaaccatgt
      661 gcagcttatc aaccagtttg agcagacggg cacgcatgca aaccgctatg acgttaccgt
      721 gttggtaaac ggcttgccgc tggtgcagat tgaattgaaa aagcgcggcg tggcggtgcg
      781 cgaggcattc aatcaggtgc accgttacag caaagagagc ttcaacagcg aaaattcgct
      841 gttcaaattc ctgcaaatct tcgtgatttc caacggcacg gatacgcgct atttcgccaa
      901 caccaccaag cgcgacaaaa acagcttcga tttcacgatg aattgggcgc ggtcggacaa
      961 tcatccgatt aaggatttga aagactttac tgccacgttc ctgcagaaaa gcgtattgct
     1021 gggcgttttg ctgcattaca gcgtgttcga tgcgaatgat acgctgctga ttatgcggcc
     1081 gtaccagatt gccgccgccg aacgcatttt gtggaaaatc aacagttcgg cgcaggcgaa
     1141 gaattggagc gggccggaaa gcggcggcta tgtctggcac accacgggca gcggcaaaac
     1201 gctgaccagc ttcaaggcgg cgcgtctggc gacggaatcg gcgtttatcg acaaggtttt
     1261 cttcgtggtg gacaggaagg atttggacta tcagacgatg aaggaatacc aacgtttttc
     1321 gaccgacagc gtgaacggtt cggaaagcac ggcgggcttg aaacgcaatt tggaaaaaga
     1381 cgacaacaaa atcatcgtta ccaccatcca gaagctgaac aacctgatga agagtgaaga
     1441 taatctgccg gtttatcacc agcaagttgt ctttattttc gacgaatgcc accgttcgca
     1501 attcggcgaa gcgcaaaaaa acctgaaaaa gaaatttaaa aaattctgcc agttcggttt
     1561 taccggtacg ccgatttttc atgaccatat cgttgatggc aaactgatta tgaaaggcaa
     1621 tgcgcttggt tcggagagta cggaaagcgt atttgggaga cagctgcatt cttatgtgat
     1681 taccgatgcc atccgcgatg aaaaagtatt gaaattcaaa gtggattaca acgatgtgcg
     1741 cccgcagttc aaagccgtgg aagcggaaca ggacgagaag aaactgagtg ccgccgaaaa
     1801 ccgccaagcc ctgctgcatc ctgaacgcat ccgcgaaatc acgcaatata tcctgaacca
     1861 gttcaggcag aaaacacacc gcttgaatgc gggcggcaaa ggctttaacg ccatgtttgc
     1921 cgtcagcagc gtggatgcgg cgaagtgcta ttacgaagcg ttcaaaacac aacaggcagg
     1981 cagcctgcac ccgctgaaag tggccaccat tttttccttt gccgccaacg aagagcaaaa
     2041 cgccgtcggt gaaattgccg atgaaacctt tgaaccggaa gcgatggaca gcagcgcaaa
     2101 agaatttttg caggctgcca tcaacgatta caacgcctgt ttcaaaacca atttcggcac
     2161 ggacagcaaa gcctttcaga actactaccg cgatttggca aaacgggtaa aaaatcagga
     2221 agtggatttg ctgattgtgg tcggcatgtt tttgacgggt tttgacgcgc cgacgctgaa
     2281 cacgctgttt gtcgataaaa acctgcgcta tcacggcctg atgcaggcgt tttcgcgcac
     2341 caaccgcatt tacgatgcca ccaaaacctt cggcaacatt gtctgcttcc gcgatttgga
     2401 gcaggcaacc attgatgcga ttaccttgtt tggcgacaaa aacaccaaaa atgtagtgct
     2461 ggaaaaaagt tacgaagaat acatgaacgg ctataccgac agccagaccg gcgaagcgcg
     2521 acgcggctat ttggatgtgg caaaagaatt gcacgagcgt ttccccgatc ccgacaaaat
     2581 cgaaacggaa aaagacaaaa aagattttgc caaactcttc ggcgaatacc tgcgggcgga
     2641 aaacgtattg cagaactacg atgaatttgc cgcgctgcgc gagttgcaga gtgtggacgc
     2701 ggcggacgaa gatgcgatga aggcgtttca agaaaaatac tacctgagcg atgaagacgt
     2761 gcaggaaatg cggcaagtgc cgatgccgtc tgaaagggcg gtgcaggact accgttccgc
     2821 ctacaacgac atccgcgatt ggttgcgccg ccaaaaagca ggcgaacaga aagaacagtc
     2881 aaaaatcgac tgggacgatg tggtttttga ggtggatttg ctcaaatcgc aggaaatcaa
     2941 tctggattac atcttgcaac tgattttcga gcatcacaaa aaaatcaaag gcaaagcgga
     3001 gctggtggaa gaaatccgcc gtatcatccg cgccagtatc ggacaccgcg ccaaagagag
     3061 cctgattgtg gatttcatca acgatacgga tttggataaa gtccccgatg ttcccgccat
     3121 actggaaacc ttctacacct acgctcaaga ggtgatgagg aatgaagccg cagagctgat
     3181 tgccgccgaa ggtttgaacg aaaccgccgc caaacgctat ttaatcagct cgctcaaacg
     3241 cggctatgcc agcgaaaacg gtacggaact gaccgaaacc atgccgaaaa tgagtccgct
     3301 caacccgcaa tatctgacga agaaacaaag tgtttttcaa aagattgcgg cgtttgtgga
     3361 gaagtttgcc ggaataggga cagatatttg acaaaatgcc gtctgaacct ttcagacggc
     3421 atttttgatt ttatgcggag gcggttttta ttttgacctt gcttttctta aacttcaaca
     3481 cggcttcttc ttttgccgca tcccagtcta tccgcacgaa gccgccgtcg gatagtttgc
     3541 cgaacaggag ttcgtcggcg agcggtttgc ggattttttc ctgaatcagg cggtgcatcg
     3601 ggcgcgcgcc catttgcggg tcgaaacctt tttccgccag atatttgtgc aatgccgacg
     3661 tgaattcggc ttcgactttt ttgtcgagga gctggtgttc gagctggagc aggaatttgt
     3721 ccacgacttt gacgatgatg ggttcggaca agggtgcaaa cgggataatc gcgtccaagc
     3781 ggttgcggaa ctcgggcgtg aagagcttgt tgattgcctg catttcgtcg ccgcgttcgc
     3841 gcttggcggt aaagccgagg ctggggcggc tgaggctttc cgcgcctgcg ttggtggtca
     3901 taatcaggat gacgttgcgg aaatcggcac tcttgccgtt gttgtcggtc agtttgcctg
     3961 cgtccatgac ttgcaggagg acgttgaaaa tgtcggggtg ggctttttcg atttcgtcca
     4021 agagcaatac gcaatgcggc tgtttgttga cggcttcggt caaaaggccg ccttgttcaa
     4081 agccgacgta gcccggtggc gcgccgatga ggcgcgatac ggcatggcgt tccatgtatt
     4141 cggacatatc aaagcgttgc agcggtacgc ccagcgagta ggcaagctgt ttggcggctt
     4201 cggttttgcc cacgccggtc gggccggaga agaggaagct gcctatcggt ttgtcgggca
     4261 gggcaaggcc ggaacgcgac attttgacgg cggcaaccag cgcgtcgatg gcgttttctt
     4321 gaccgtaaac catgtttttc aaatcgcgac cgaggaattg cagcacttgt ttgtcgtcgt
     4381 gcgacacggt tttttcggga atccgcgcaa ctttggcgat gacggtttca atttgtgctt
     4441 tgccgatgac ttttttctgt ttggatttgg gcagaatccg ttgcgccgcg cctgcttcgt
     4501 ccatcacgtc gatggctttg tcgggcagga aacgctcgtt gatgtagcgt gcggagagtt
     4561 cggcggcggc ttcgagtgcg ccttgcgtat agcggacttg gtggaaggct tcaaacatcg
     4621 gcttcaagcc gcgcaggatt tgtacggttt cggaaacggt gggttcgacc acgtcgattt
     4681 tttggaagcg gcggcttaag gcgtggtctt tgtcgaaaat ggtgcggtat tcgtcgtaag
     4741 tggtcgcgcc gatgcagcgc agcgaacctt ttgccagcgc gggtttgagc aggttggacg
     4801 cgtccatggt gccgccgctg gtgctgcctg cgccgatgat ggtgtggatt tcgtcgataa
     4861 acaaaatggc gtgcgggatt ttttcgagct gtttcaagac ggatttgacc cgcgcttcaa
     4921 agtcgccgcg gtatttcgtg cccgccaaca gcgagcccat atccagcgcg tacacttcgg
     4981 catctttgag cgcgtctgga atgccgccgt tgacgatttg atgtgccaaa ccttccgcca
     5041 gcgcggtttt gcccacgccc gcttcgccga ccaaaagcgg attgtttttg cggcggcggc
     5101 ataggatttg caccagccgt tccatttcgt gtttgcgacc aatcaaaggg tcgatacggc
     5161 cggctttgac ttcggcgttg aggttgacgg tgtacgccga taaagggttt ttgcccggtt
     5221 tggtgcggtt ttcattatcg tcgtccatgc cgtctgaaga atagttgcca tcgtcttcat
     5281 cttcatcggg agagccgtgg gcaatacagc gcaaaacttc aaaacgcgta accgattgca
     5341 gcttgaggaa atagacggtg tggctgtcgg tttcgctcat cagcgcgacc aaaacgtcca
     5401 acggttcgac tgcggctttt ccggcagact gggtatgcac catcgcccgt tgcatcacgc
     5461 gttggaagcc gagcgtgggc cgtgtttcga ccgtgtctaa aaggtgttcg ggaatcaggg
     5521 gggtgttttc ggcaacgctg gcggcgagct gttcggacac cactttcaaa tccgcgccgc
     5581 agagttttaa gacgttcggc acggaggcat cttcttcgat gagtaccaaa agcagatgct
     5641 cgaggctgat aaattcataa tgagccttac gcgcctcgcg gtaaagctgc tgcaaaatct
     5701 gttccaattc gggtgcaagc atattaaatc tcctcgacaa tacattgcag cggatgccct
     5761 tcggcttttg cccgctgcat gacttgttgc tgtttggttt gggcaatatc gcgcgtgtaa
     5821 gtgccgcaca ggcctttgcc ttcgtgatga accaagagca ttaccgctac cgcctgttct
     5881 tgtccgagca tgaagatttc ggtcaggatt tcaacgacaa attccatcgt ggtgtaatcg
     5941 tcgttcaata ggaaaacgcc gtaacgtttc ggcggcaggg tgttcagacg gtgcaagagc
     6001 gtgtcggatt ggtgttgcgc ggtcatagtg tgtcccattt gaaagccgcg ttcagacggc
     6061 atttttgttg tattttcggt acttttgcct attttcccac ttttttgaaa acatagcttg
     6121 acgttttgtc ttaacaaatg taaaaagacg gttaagcagg attgggcatc cgccgagtat
     6181 atcaagctgg aaggaacgcc agacggctcg gtttgccgta tgccttgttt tgctgatttt
     6241 gttaattttt gagtatagga agtttctaat ggcaaccggt atcgtaaaat ggtttaacga
     6301 cgctaaaggt tttggtttca tcacgcctga tgaaggcggc gaagatttgt tcgctcactt
     6361 ctcagcaatc aatatggaag gtttcaaaac cctgaaagaa ggccaacgcg tctctttcga
     6421 cgtaaccacc ggccctaaag gcaaacaggc cgccaacatt caggctgctt aattcctgat
     6481 gtacggtcaa a
//
LOCUS       DAWITQ010000115         6481 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.115, whole genome shotgun sequence.
ACCESSION   DAWITQ010000115 DAWITQ010000000
VERSION     DAWITQ010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6481)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6481)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6481
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.115"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            17..337
                     /locus_tag="WIX18_001619"
     CDS             17..337
                     /locus_tag="WIX18_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HEZ5238701.1"
                     /translation="MGEKIKDGKKTVLSCEEEQKICNTFTNKQAVEDFSVVIGYDEIK
                     AKNHSLSAGQYFEVKIDYVDISADEFAQKMAGFSADLDKLFAESAELEKEIKDRLAML
                     KFNS"
     gene            348..485
                     /locus_tag="WIX18_001620"
     CDS             348..485
                     /locus_tag="WIX18_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HEZ5238702.1"
                     /translation="MKPVKLKMPSESLSDGILFGLENTYAVLSLKERIQKTKATGIYR
                     K"
     gene            complement(645..1982)
                     /gene="ribB"
                     /locus_tag="WIX18_001621"
     CDS             complement(645..1982)
                     /gene="ribB"
                     /locus_tag="WIX18_001621"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HEZ5238703.1"
                     /translation="MTDTAGLRRRNLRQWIAEHYGGLQTRFAEAVALNTGELSALLKN
                     KSFGEKKARKIEQAAKMPAFWLDTEHTARPPEHTGKHTMSHISPIPEILADIKAGKMV
                     IITDAEDRENEGDLLMAAQFVTPEAINFMIKHARGLVCLPMDGEMVEKLGLPMMTQKN
                     GAQYGTNFTVSIEAAHGITTGISAADRALTIQTAVSPTAKPEDIVQPGHIFPLRAQKG
                     GVLVRAGHTEAGVDLAQMNGLIPASVICEIINDDGTMARMPELMKFAEEHKLKIGTIA
                     DLIEYRSRTESLLEDMGNAPVQTPWGEFQQHVYVDKLSGETHLALVKGTPSADTETLV
                     RVHEPFSVMDFIQANPRHSWSLPKALERIQQAESGVVILLHRTEDGAALLDRTLPKGA
                     NQAYKWDSKSYGIGAQILAGLNVKKLRVLGQPSSFTGLTGFGLEVVGFEEAEK"
     gene            complement(2204..3218)
                     /locus_tag="WIX18_001622"
                     /pseudo
     CDS             complement(2204..3218)
                     /locus_tag="WIX18_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273336.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
     gene            complement(3374..3967)
                     /gene="ribA"
                     /locus_tag="WIX18_001623"
     CDS             complement(3374..3967)
                     /gene="ribA"
                     /locus_tag="WIX18_001623"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HEZ5238704.1"
                     /translation="MSELLNYVASCRLPTEWGVFTMHGFEEANGQEHVALTVGDFSDG
                     NPVLTRIHSECLTGDALFSRKCDCGPQLEAAMRAVQTEGRGIIVYLRQEGRGIGLINK
                     IRAYHLQDQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLK
                     DAGINVVERIPLHVGENLENKRYLQTKADKLGHLMSE"
     gene            complement(3960..4634)
                     /locus_tag="WIX18_001624"
     CDS             complement(3960..4634)
                     /locus_tag="WIX18_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238705.1"
                     /translation="MPAALIKDFLLTQGLKLPLDEVRTAYLTAQTVMDMGTTSIERSV
                     LWLEHEDWRLADYLEQNSGNEEGLKRLFMALDSVFSRCKGVRAAAVYALMPSENAAFR
                     LVCLSRQGEVLENLWDLDEAAGKVSLACRSAQSGWMNVASDVRRWLDLGELSGERNHA
                     SAAQISIPVCTESGGVLGVVHVEFECAECAGTAAQVEWVALALALSEPLKQLLGITAA
                     EGDENV"
     gene            4788..4872
                     /locus_tag="WIX18_001625"
     tRNA            4788..4872
                     /locus_tag="WIX18_001625"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4822..4824,aa:Leu,seq:tag)
     gene            5392..6426
                     /gene="purM"
                     /locus_tag="WIX18_001626"
     CDS             5392..6426
                     /gene="purM"
                     /locus_tag="WIX18_001626"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HEZ5238706.1"
                     /translation="MSTSLSYRDAGVDIDAGDQLVENIKPFAKRTMRPEVLGDLGGFG
                     ALVEIGKKYKNPVLVSGTDGVGTKLKLAFDWDKHDMVGIDLVAMSVNDILVQGAEPLF
                     FLDYFACGKLDVPRATDVIKGIAQGCEESGCALIGGETAEMPGMYPVGEYDLAGFAVG
                     VVEKENVITGRSIGAGDVVLGLASNGAHSNGYSLIRKIIERDNPDLDAEFDNGKTLRE
                     AVIAPTRLYVKPILAALEKFTIKGMAHITGGGITENVPRVLPENTVAQIDAKSWELPK
                     LFQWLQKAGNVETQEMYRTFNCGIGMVVIVAAEDADAVQGLLGEQGETVYRLGLIRER
                     QGDEHQTQVA"
BASE COUNT         1614 a         1572 c         1687 g         1608 t
ORIGIN      
        1 aatcgacgca tcgggcttgg gcgaaaaaat taaagacggc aaaaaaaccg tactttcctg
       61 cgaagaagaa caaaaaatct gcaatacttt cacgaacaaa caggcagtgg aagatttcag
      121 tgtggtaatc ggctacgatg aaatcaaagc gaagaatcac agcttgtcgg cggggcagta
      181 tttcgaggta aagattgatt atgtggatat ttccgccgac gaatttgcgc aaaaaatggc
      241 gggattttca gcggatttgg ataaactttt cgccgaatct gccgaattgg aaaaagagat
      301 taaggataga ttggcgatgt tgaaattcaa ttcataaata ccgatgaatg aaaccggtca
      361 aacttaaaat gccgtctgaa agcctttcag acggcatttt gtttggtttg gaaaatactt
      421 atgccgttct ttccctgaaa gagagaatcc aaaaaaccaa agccacagga atttatcgga
      481 aatgacaaaa acccgacgaa ccggattccc gcctgcgcgg gaatgacgaa ttagaagtta
      541 cccgaaattt gcaaaaacaa aatccaaccc aacagaccgg gttttcgttt gcacggaaat
      601 aatgcaataa ataaagcaaa tataaagtat ttgaatttac tatattattt ttccgcttct
      661 tcaaagccga cgacttccaa accgaagccg gtcaggccgg tgaaagatga gggctgcccg
      721 aggacgcgca gttttttgac gttgaggccg gcgaggattt gcgcaccgat gccgtagctt
      781 ttgctgtccc atttgtaggc ttggtttgca cctttgggca gggtgcggtc gagcagggcg
      841 gcgccgtctt cggtgcggtg cagaaggatg actacgccgc tttcggcctg ttggatgcgc
      901 tcgagtgctt tgggcagcga ccatgaatga cgcgggttag cttggatgaa gtccatgacg
      961 ctgaagggtt cgtggacgcg gacgagggtt tcggtgtcgg cggagggcgt gcctttgacg
     1021 agggcgaggt gggtttcgcc ggagagtttg tcgacgtaaa cgtgttgttg gaactcgccc
     1081 cacggggttt gtacaggcgc attgcccatg tcttcaagca ggctttcggt acggctgcgg
     1141 tattcgatga ggtcggcaat cgtgccgatt ttgagcttgt gttcttcggc gaatttcatc
     1201 agttcgggca tacgcgccat cgtgccgtcg tcgttgatga tttcgcaaat aacggaggca
     1261 ggaatcagcc cgttcatttg cgccaggtcg acgccggctt cggtgtgtcc ggcgcggacg
     1321 agtacgccgc ctttttgggc gcgaagcgga aagatatgac cgggttggac gatgtcttcg
     1381 ggtttagcgg tcggggaaac ggcggtttga atagtcaggg cgcggtcggc ggcggaaatg
     1441 ccggtggtaa tgccgtgtgc ggcttcgatg gagacagtaa agttggtgcc gtattgcgcg
     1501 ccgttttttt gggtcatcat cggcagcccg agtttttcga ccatttcgcc gtccatcggc
     1561 aggcagacca agccgcgcgc gtgtttgatc atgaagttga tggcttcggg cgtgacgaat
     1621 tgcgccgcca tcagcaggtc gccttcgttt tctcggtctt cggcatcggt gatgatgacc
     1681 attttgccgg ctttgatgtc ggctaggatt tcggggatgg gggaaatatg ggacatggtg
     1741 tgttttcctg tgtgttcggg cgggcgggcg gtgtgttcgg tatcgagcca gaaggcgggc
     1801 atttttgccg cctgttcgat tttacgggct tttttctcgc cgaaggattt gtttttcaaa
     1861 agggcggaga gttcgcctgt gttgagggca acggcttcgg caaaacgggt ttgcaaaccg
     1921 ccgtagtgtt ctgctatcca ttgccgcagg ttgcggcggc gcagaccggc tgtgtcggtc
     1981 atcgtttcat cctttgtaga aatcggatgt agcggattgt aatcgcgtat ttaccaaaaa
     2041 gcaaatctgt ttttttcgcc aaaccgaatt atttgctttt tggtaaacag atgccgtctg
     2101 aagccggatt cgtggcttca gacggcattg ccgcaatcct tgccggccgg gggctgtttg
     2161 tcccaacttc ccgcgcactt ctgatttggg gtttgccgga agcttattcc gaaaaaaatt
     2221 tctgataaac ggccttgatt gccgggtaca gcataggcgg tacgagcagg cgcaatatcg
     2281 gcaatcctat gatgaatgcg gtcttcccga taaaaaccgg acggattgtc ttcgcgccga
     2341 atatctttct gcatttttct ttaaatgaaa aatatttccg gtagatgagg ataatgtttt
     2401 tggaaaaata aagccttacc aatatagacc tcagatagcc gatattgtcg aagacaaatt
     2461 tttgcaaacc gccgtagatg ggggaatttt tgttttcgac taaaaaatcc acaccccggt
     2521 cgagatgcgc cagcatatcg ctgaaatttt tgtatttgac gttgtggctg atagagttgc
     2581 cgagaacgcg gtattgataa aaagggttat cgtaaaaggc aaaagtcttg acaaaacgcg
     2641 ccaatttcaa actgtacggg aaatcctcgt gaatgtatcc ttttgggaaa aacagattgt
     2701 ttttgatgat tatttcccgc ctgacgattt ttgtccacgc gttggcgata tagtaccgcc
     2761 cctccaccaa cgtttcaaaa tggcggacaa aatcattatc cgaaaagtcc gcccctttgg
     2821 ggatgacgtg gtaattgagg gacgagggat gcaggatcaa atcaaccttt ttgtctgcaa
     2881 gttgttgtaa atcaaagaga atcccccccc cccgcgtttt ttgaacggtt ggtatcggcc
     2941 caataatcgt cgctgtccaa aaagattagg taatcgcctt ttgccgcccg gataccggcg
     3001 ttgcgggcat ccgacagccc gccgttttct tgatgaatca cttttatatg cggatatttg
     3061 cctgcatatt cgtcgcaaat cttcccgcag ccgtccggcg aaccgtcatc gaccaaaatc
     3121 atttcataat cggcaaaatt ttcggcaagc acggaatcca cgcagcagcg gaggtatttt
     3181 tccacattgt aaatagggac gatgatggag aaaatcataa atatcaatcc attatattaa
     3241 gatgtttgcg cgtatgcctc aaacccgcgc tcgcaatgcg tttgcatcca ctataaaact
     3301 tattgcttta tcaaggtatg gaaacctgtt tcccgaaagg cggcgcagga tgcccgttcc
     3361 ctgcaacttt gccttattcc gacatcagat gtcccagctt gtctgctttg gtttggaggt
     3421 agcgtttgtt ttcaaggttt tccccgacgt gcagggggat gcgttcgacc acgttaatcc
     3481 ccgcatcttt cagggtttgg attttttcgg ggttgttggt cagcagtttg accgagcgga
     3541 tgcccagata ttcgtagata gattgcgcca aacggaaatc gcgggcatcg acgggcagcc
     3601 cgagtgccaa attggcttca accgtatcca taccttggtc ttgcagatga taggcgcgga
     3661 ttttgttaat cagcccgatg ccgcgtcctt cctgacgcag atagacgatg atgccgcgcc
     3721 cctctgtctg tacggccctc atggccgctt caagttgagg tccgcagtcg cattttctcg
     3781 agaacagcgc atcgcccgtc aggcattcgg agtggatgcg cgtcagaacc ggattgccgt
     3841 ctgaaaaatc accgacggtc agcgcgacgt gttcctgccc atttgcctct tcaaagccgt
     3901 gcatcgtaaa tacgccccat tcggtcggca ggcggcagga agcaacatag tttaataatt
     3961 cagacatttt catctccttc tgcggcagtg atgcccaaaa gctgcttcaa aggttcggac
     4021 aaagccaagg caagagccac ccattccacc tgtgctgccg tacccgcaca ctctgcgcat
     4081 tcaaattcca catgaaccac gcccaacaca ccgccacttt ccgtgcagac cggaatggaa
     4141 atttgcgccg ccgaagcatg attgcgttct cccgaaagct ctcccaaatc caaccaacgg
     4201 cgtacatccg aggcaacatt catccagccg ctttgcgccg aacggcaagc cagcgaaacc
     4261 ttgcctgccg cttcatccaa atcccacagg ttttccaaaa cctcgccctg ccgggacagg
     4321 caaaccagcc gaaaggcggc attttcagac ggcatcaggg cataaacggc tgcggcgcgc
     4381 acgcctttac agcgtgaaaa caccgaatcc aaagccatga aaagccgttt cagaccttcc
     4441 tcattcccgc tgttttgctc caaataatcg gcaagcctcc aatcctcatg ctcaagccac
     4501 aaaaccgaac gctcaatcga agtcgtcccc atatccatta ccgtctgcgc cgtcagatac
     4561 gccgtccgaa cctcgtcaag cggcagcttc aaaccctgag tcagcagaaa atccttaatc
     4621 aaagcagcag gcatacccaa attccgtcaa taaaaacaaa aaaccgcccg attccgatgt
     4681 caggcggacg aaaaacagat tttaccgccc caaaccccaa gccatcaaca gccccgccga
     4741 aaaccttgca caaaaaaaca aaatctgtat aattgtccaa ttcccatgcg gacgtggcga
     4801 aattggtaga cgcaccagat ttaggttctg gcgccgagag gtgtgagagt tcgagtctct
     4861 ccgtccgcac caataatgat aaataaatca tatagttaat gcttatcggg acaaattagt
     4921 gccacaaaac ataagtcgtc tgcttttcag cgggcggctt ttttatctgc ctatatgttt
     4981 caacacgcag aacggtacat aaagtgccgc catttgttct accccgaatc agaagcgggt
     5041 gcttccgccc gcaatcagat tcaccgcccc taatgccggg gtttcaactg gaaagaagaa
     5101 aatattgatt ttgatgatgg catcaaaaaa ccccttccgc ccgtctgcca aaaggaatgg
     5161 ttaagaaaag caatgcgtct tttgatggaa cgcgatatat aaggaattga ggggaagggc
     5221 aggcgggttt ctgcccgtta atcctgcgga cgatcccgcc aaacccgaca cgcgcgggca
     5281 tatggcggat tgtttacaat attgtctaaa aatctgaacc tgcaaacgtg aaataaggta
     5341 gaatacgccc cgttatttta ccgtccaatc cccatttacc aaggaaaaac gatgagtact
     5401 tcattgagtt accgcgatgc aggtgtcgat atcgacgcag gcgaccaact ggtcgaaaac
     5461 atcaaaccgt ttgccaaacg caccatgcgt ccagaagtat tgggggattt gggcggtttt
     5521 ggcgcattgg tcgaaatcgg caagaaatat aaaaatcccg tattggtcag cggtacggac
     5581 ggtgtgggta ccaagctcaa gcttgccttt gattgggata aacacgatat ggtgggcatc
     5641 gaccttgttg caatgagtgt caacgatatt ttggttcaag gagcagaacc tctgtttttc
     5701 ttggattatt tcgcctgcgg caaattggat gttccgcgcg caaccgatgt catcaaaggc
     5761 attgcacaag gttgcgaaga atccggctgc gccctgattg gcggggaaac tgccgaaatg
     5821 ccgggcatgt atcccgtcgg agaatacgat ttggcgggtt ttgccgtcgg cgtagtggaa
     5881 aaagagaatg tcattaccgg ccgcagtatc ggcgcgggcg atgtggtatt gggtttggct
     5941 tccaacggcg cacattcaaa cggctattcc cttatccgta aaatcatcga acgcgacaat
     6001 cccgatttgg atgccgagtt tgataatggc aaaaccttgc gggaggctgt tattgcgccg
     6061 acccgtctgt atgtgaaacc gattcttgcc gctttggaaa aatttaccat taaaggtatg
     6121 gcacacatta ccggcggcgg cattaccgaa aacgtgccgc gcgtgttgcc tgaaaacacg
     6181 gttgcacaaa tcgatgctaa atcgtgggaa ttgcccaagc tcttccaatg gcttcaaaag
     6241 gcgggcaatg tggaaaccca agaaatgtac cgaaccttta actgcggcat cggcatggtc
     6301 gttattgttg ctgccgaaga tgccgatgcg gttcagggtc tcttgggtga acaaggtgaa
     6361 acagtttacc gtttaggttt gatccgtgag cgtcagggag acgagcatca aacccaggtt
     6421 gcctgattgc ttctatagcg aaatgccgtc tcaaacatgg gtttggacgg catttttata
     6481 g
//
LOCUS       DAWITQ010000116         6343 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.116, whole genome shotgun sequence.
ACCESSION   DAWITQ010000116 DAWITQ010000000
VERSION     DAWITQ010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6343
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.116"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(57..1511)
                     /locus_tag="WIX18_001627"
     CDS             complement(57..1511)
                     /locus_tag="WIX18_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HEZ5238707.1"
                     /translation="MTTQTIKFHMKPETFKQNAAISLQDKPLRKSLRTAMDMLMTKRK
                     AVLTDEEELQSLRDLCEHVRQRSLSKLPALLEQLEENLTKLGVKVHWSETPTEACQII
                     HDIITAKNGKLMVKGKSMVSEEIELNHYLEAKGIKAVESDLGEFIVQMAGEKPTHIVM
                     PAIHKTKEQVSELFHQNLGTPLTDDVDQLTGFARKALRDIYSTADVGLSGVNFAVAET
                     GTLCLVENEGNGRLSTTVPPVHIAITGIEKVVAKLSDIPPLYSLLPRSAIGQNITTYF
                     NMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRTLQCIRCGACMNHCPVYTRI
                     GGAAYGTTYPGPIGEIISPHLLGLDATRDLPTACTMCGACVEVCPVRIPITEQMQRLR
                     VEAQRSPTETVPHPIRGQGASHTFGEQMAWHTFNGIFSGSKTYRAFGWAATKFRNLTP
                     RKQLGWTQNRVPMKPAKKTLHELMAEKMRQKEQA"
     gene            complement(1508..2209)
                     /locus_tag="WIX18_001628"
     CDS             complement(1508..2209)
                     /locus_tag="WIX18_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HEZ5238708.1"
                     /translation="MSARENILAKLKKADALPMEEPAVFDYYREMGVSWGSEVERLKH
                     WAAAMRAVKTEIYWVTKSNWMQVFREAAEGKGLKNILLPLATEHGQIARAALADSNIE
                     PIAFEREIDTWKTEFFTNIDAGFSGAQCGIARTGTLMLFSSPEEPRTLSLVPPVHFCL
                     FDTSKMYNEFHNAVEGEKLVENGMPTNVFLISGPSKTADIQLTLAYGAHGPRDLVILA
                     ILPDHISPADLEENA"
     gene            complement(2206..2985)
                     /locus_tag="WIX18_001629"
     CDS             complement(2206..2985)
                     /locus_tag="WIX18_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HEZ5238709.1"
                     /translation="MSATIPPKIIRYDSNPTDVYFFGTCVLDLFMPEAGMDAIALIEQ
                     QGIRVHFPMAQSCCGQPAYSSGHPTEAFDVARAQLDLFPEEWPIVVPSGSCGGMMKHH
                     WPTLFKGSEYEERAVDCAGRIIEFTHFLLAIGFKPEDKGEPLKVAVHTSCAARREMNV
                     HLSGWQLIDGMENVERIVHDHESECCGFGGTFSVKQADISGAMVTDKVAALKETGATE
                     IISADCGCMMNIGGKIAKDEPDMPRPKHIASFLLERTGGKA"
     gene            3269..4675
                     /locus_tag="WIX18_001630"
     CDS             3269..4675
                     /locus_tag="WIX18_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ5238710.1"
                     /translation="MEKNTLSARAPSPWLPLLLAIAIFMQMLDATILNTALPEIAADM
                     NESPLDMQLAVVAYTLTVALLIPLSGYLADRFGTKKVFFGSIAVFMLGSALCAASGSL
                     FELTLSRVVQGIGGSMLVPIPRLTILRVYDKSKLLNAINYAVMPALIGPVLGPLAGGY
                     LVEYASWHWIFLLNLPIGLLGFILGRNIMPDIKGSNISLDFKGYLIFSAAACLLLLSA
                     ESLSHALPPYFALLPLCGGLLFARRYFRHMKTASKPIYSADLFLIRTFRLGLAGNLFS
                     RLGISSIPFLMPLMFQVAFGFGASLSGWLVAPVALSSLLVKPLIAPLMKRFGYRTVLL
                     WNTKLLAAFIMLLALPDGNSSLWIWIFLSLAIGACNSLQFSAMNTLTLAGLRPQQTGS
                     GNSLMAVNQQLAISMGIVVGALILKNWTFLIPASSGLHSAFRMTLLSIGGITLASSLV
                     FKRLHVSDGANLTRNTPS"
     gene            4787..6313
                     /locus_tag="WIX18_001631"
     CDS             4787..6313
                     /locus_tag="WIX18_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003765285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HEZ5238711.1"
                     /translation="MKTRSLISLLCLLLCSCSSWLPPLEERTESRHFNTSKPVRLDNI
                     LQIRHTPHTNGLSDIYLLNDPHEAFAARAALIESAEHSLDLQYYIWRNDISGRLLFNL
                     VYLAAERGVRVRLLLDDNNTRGLDDLLLALDSHPNIEVRLFNPFVFRKWRALGYLTDF
                     PRLNRRMHNKSFTADNRATILGGRNIGDEYFKVGEDTVFADLDILATGSVVGEVSHDF
                     DRYWASHSAHNATRIIRSGNIGKGLQALGYNDETSRHALLRYRETVEQSPLYQKIQTG
                     RIDWQSVQTRLISDDPAKGLDRDRRKPPIAGRLQDALKQPEKSVYLVSPYFVPTKSGT
                     DALAKLVQDGIDVTVLTNSLQATDVAAVHSGYVKYRKPLLKAGIKLYELQPNHAVPAT
                     KDKGLTGSSVTSLHAKTFIVDGKRIFIGSFNLDPRSARLNTEMGVVIESPKIAEQMER
                     TLADTTPKYAYRVTLDRHNRLQWHDPATRKTYPNEPEAKLWKRIAAKILSLLPIEGLL
                     "
BASE COUNT         1364 a         1823 c         1605 g         1551 t
ORIGIN      
        1 aaatgccgtc tgaagccctg tttcgggttt cagacggcat ttttgcgaac aactttttat
       61 gcctgttctt tttggcgcat tttttctgcc atcagttcgt gcagggtttt cttcgccggt
      121 ttcatcggca cgcggttttg cgtccaaccc aactgtttgc gcggggtcag gttgcggaac
      181 ttggtggctg cccaaccgaa ggcgcggtag gttttgctgc cgctgaaaat accgttgaat
      241 gtgtgccacg ccatttgttc gccgaaggta tgcgatgcgc cttgccctcg gatggggtgc
      301 ggcacggttt cggtcggcga acgttgcgct tcaacgcgca aacgctgcat ttgttcggta
      361 atcgggatgc gtaccggaca aacttccacg cacgcgccgc acatggtaca ggcggttggc
      421 aggtcgcgag tggcatccag acccaacagg tgaggggaaa taatctcgcc aatcgggccg
      481 ggataggttg tgccgtatgc cgcgccgccg atgcgagtat aaaccgggca atggttcata
      541 cacgcgccgc aacggataca ttgcagggtg cggcgcattt ggtcttcggc ataagcctgg
      601 ctgcggccgt tgtcgagcag aaccaagtgc atttcttgcg gaccgtctaa ttcttcactg
      661 cggcgcgggc cggtaatcat attgaaatag gttgtgatgt tttgaccgat ggcggagcgc
      721 ggcagcagac tgtacaaggg tgggatgtcg gacaatttcg ccaccacttt ttcaatgccg
      781 gtaatagcga tatgcacggg aggaacggtg gtactcaagc gaccgttgcc ctcgttttcc
      841 accagacaca gcgtacctgt ttcagcaacg gcaaagttta cgccactcaa accgacatcg
      901 gcagtgctgt aaatatcgcg cagtgcttta cgggcgaagc cggtcagttg gtctacatcg
      961 tctgtcagcg gcgtaccgag gttttggtgg aacagttcgc taacctgttc tttggttttg
     1021 tggatagcag gcatcacgat atgggtcggt ttttcacctg ccatttggac gatgaactcg
     1081 cccaagtcgc tttctaccgc tttaatgcct tttgcttcaa gataatggtt cagctcgatt
     1141 tcctcgctga ccatcgattt acctttgacc atcagcttgc cgtttttggc tgtgatgatg
     1201 tcgtggataa tttggcaggc ttcggtcggg gtttctgacc agtgcacttt cacgcccagc
     1261 ttagttaggt tttcttccag ctgctccagc agggcaggta atttagacaa tgaacgctga
     1321 cggacgtgtt cgcacaaatc gcgcaggctt tgcagctctt cttcgtcggt caaaacggct
     1381 ttgcgtttgg tcatcagcat atccatcgcg gtacgcaggc ttttgcgcaa aggcttgtct
     1441 tgaagggaaa ttgcggcgtt ttgcttgaaa gtttccggct tcatgtgaaa tttgatggtt
     1501 tgcgtagtca tgcgttttcc tccaaatcgg caggggaaat gtggtcgggc aggatggcga
     1561 ggatgaccaa atcgcgcggg ccgtgcgcgc cgtaagcaag cgtcagttgg atgtctgcgg
     1621 ttttggacgg gccggaaatc aggaatacat tggtcggcat accgttttcc accagttttt
     1681 cgccttcgac ggcattatga aactcgttgt acatcttgga cgtatcgaac aggcagaaat
     1741 gcacgggcgg aacgaggctt aaagtacgcg gttcttcggg gctggaaaac agcatcagcg
     1801 tgccggtgcg ggcgatgccg cattgcgcgc cgctgaagcc cgcatcgatg ttcgtgaaaa
     1861 actcggtttt ccaagtatcg atttcgcgct cgaaggcaat cggttcgata ttgctgtccg
     1921 ccaatgcggc acgggcaatt tgtccgtgtt cggtcgccaa gggcagcagg atgtttttca
     1981 aacccttgcc ttctgccgct tcgcggaaaa cctgcatcca attgcttttc gtcacccaat
     2041 aaatttcggt tttgaccgca cgcatagcgg cagcccaatg tttcagacgc tcaacttcgc
     2101 tgccccaaga aacacccatt tcacggtaat aatcaaaaac cgcaggttct tccatcggca
     2161 atgcgtcggc ttttttcagt tttgccaaaa tattttcgcg cgcgctcatg ctttgcctcc
     2221 ggtacgttcc aacaagaagg atgcgatatg tttcggacgc ggcatatccg gctcgtcctt
     2281 ggcgattttg ccgccgatgt tcatcataca gccgcagtcc gcgctgatga tttcggttgc
     2341 gccggtttct ttcagcgcgg cgactttgtc ggttaccatc gcgccggaaa tatcggcttg
     2401 tttgacggag aatgtgccgc cgaagccgca acattcgctt tcgtggtcgt ggacgatgcg
     2461 ttcgacgttt tccataccgt caatcagttg ccagcctgaa agatggacat tcatttcgcg
     2521 gcgggcggcg caggaagtgt gaacggcgac tttgagcggt tcgcccttgt cttcgggttt
     2581 gaaaccgatg gcaagcagga aatgggtaaa ctcgatgatg cggccggcgc aatccacagc
     2641 cctttcctcg tactcgctgc ctttaaacag cgtcggccaa tggtgtttca tcataccgcc
     2701 gcacgaaccg gacggtacga caatcggcca ctcctcgggg aaaaggtcga gttgcgctct
     2761 ggcgacatca aaggcttcgg tcggatggcc ggatgaatag gcaggctggc cgcagcagct
     2821 ttgcgccatc gggaaatgga cgcgtatgcc ctgctgctcg attagggcaa tggcatccat
     2881 gcctgcttcg ggcataaaaa gatcaaggac gcaagtgccg aaaaaataga catcggtcgg
     2941 attgctgtcg tatcggatga tttttggggg aatggttgcg ctcatgtttt ttgataacgg
     3001 gaaacccgtt tttctctgta gaaaggtaag cgtttacttt aagtaattga ctgttgcggg
     3061 tcaagtctaa ttttaaaaaa taatccggtt tttcttacaa actaccccat aacgcttact
     3121 gtaccttact ctgataattt tcgataataa ttatcattac aataaaatgc tgattcgttt
     3181 gcttgtgaac attcaggacg ccgactctga cggcattcag acagcatctg aaaacaataa
     3241 cggcacaagg atggggtaca atcgccctat ggaaaaaaac accctatccg cccgcgcacc
     3301 atccccttgg ctgccgcttc tgctggcaat tgccattttt atgcagatgt tggatgcgac
     3361 cattttaaat accgcactgc ctgaaattgc cgccgacatg aatgagtcgc ctctggatat
     3421 gcaactggca gtcgttgcct atacgctgac ggttgccctg ctgattcctt tgagcggtta
     3481 tttggcggac aggttcggaa cgaaaaaagt ctttttcggt tcgattgccg tttttatgct
     3541 cggatcggca ttgtgcgccg catcgggttc gctgtttgaa ttgacgcttt cccgtgtcgt
     3601 tcagggcatc ggcggttcga tgctggttcc gataccgcgt ctgaccatct tgcgtgtgta
     3661 cgacaagtcc aagctgctca acgccatcaa ttatgcggtt atgcccgcat taatcggacc
     3721 ggttttaggg cctttggcgg gcggttatct ggtcgaatac gcttcgtggc actggatttt
     3781 cctgctcaac ctgcccatcg gtcttttggg tttcatattg ggacgcaaca tcatgcccga
     3841 tattaaaggc agcaatatct ctttagactt caaaggttat ctgatttttt ctgccgccgc
     3901 gtgcctcttg ttactttcgg cagaaagcct gtcgcacgcg ctgcctccgt attttgcact
     3961 gttgccgctg tgcggcggac tgctgtttgc acgccgttat ttccgacata tgaaaaccgc
     4021 gtccaaaccg atttattccg ccgacctgtt tctgatacgc actttccgtc tgggactggc
     4081 gggcaatctg ttcagccgtc tcggcatcag ctcgattcct tttctgatgc ccctgatgtt
     4141 tcaagtcgct ttcggcttcg gcgcaagcct gtcgggttgg ctggtcgccc ccgtcgccct
     4201 gtcttcgctg ctggtcaaac cgctgattgc accgctcatg aaacgtttcg gctaccgcac
     4261 ggtactgctt tggaacacca agctgcttgc cgccttcatc atgctgctcg ccctgcctga
     4321 cggaaactcg tcgctgtgga tttggatttt cctctcgctg gcgatcggcg cgtgcaactc
     4381 cctgcagttt tctgccatga atacactgac cctcgccggt ttgcgcccgc aacagaccgg
     4441 cagcggcaac agcctgatgg cggtcaacca acagcttgcc atcagcatgg gcattgttgt
     4501 cggcgcatta atccttaaaa actggacatt tctgataccg gcttcttcag gtctgcattc
     4561 cgccttccgt atgaccctgc tcagcatcgg cggcatcacc cttgcctcgt cgttggtttt
     4621 caagcgtctg cacgtttcag acggcgcaaa cctgacacgg aacacaccgt cctaaagcgg
     4681 tccgcacgca aaacttttac ccgtttcaac gtttggatta tgatgccgca cttccatgcg
     4741 cgccaacccc aaaacacagg caatgccgtc tgaaaccata tccctgatga aaacacgcag
     4801 cctaatttcc cttttatgcc tccttctctg ttcatgttct tcatggttgc ccccactgga
     4861 agaacggacg gaaagccgtc atttcaatac ttccaaaccc gtccgcctgg acaacatcct
     4921 gcaaatccgg cacacccctc ataccaacgg gctatccgat atctatctgc tgaacgaccc
     4981 ccacgaagcc tttgccgccc gcgccgccct tatcgaatct gccgaacaca gcctcgattt
     5041 gcaatactac atctggcgca acgacatttc cggccgactg ctgttcaacc tcgtgtacct
     5101 tgccgcagaa cgcggtgtgc gcgtacgcct gctgttggac gacaacaaca cgcgcggatt
     5161 ggacgacctc ctgctcgccc tcgacagcca tcccaatatc gaagtgcgcc tgttcaaccc
     5221 cttcgtcttc cgcaaatggc gcgcactcgg ctacctgact gatttccccc gcctcaaccg
     5281 ccgcatgcac aacaaatcct ttaccgccga caaccgcgcc accatactcg gcggacgcaa
     5341 tatcggcgac gaatacttca aagtcggtga ggacaccgtt ttcgccgacc tggatatcct
     5401 cgctaccggc agcgtcgtcg gcgaagtatc gcacgacttc gatcgctact gggcaagcca
     5461 ttccgcccac aacgccacgc gcatcatccg cagcggcaac atcggcaagg gtcttcaagc
     5521 actcggatac aacgacgaaa cgtccagaca cgcgctcctg cgctaccgcg aaaccgtcga
     5581 acagtcgccc ctctaccaaa aaatacagac aggacgcatc gactggcaga gcgtccaaac
     5641 ccgcctcatc agcgacgacc ctgcaaaagg actcgaccgc gaccgccgca aaccgccgat
     5701 tgccgggcgg ctgcaagacg cgctcaaaca gcccgaaaaa agcgtctatc tggtttcacc
     5761 ctatttcgtc cccacaaaat ccggcacaga cgcactggca aaactggtgc aggacggcat
     5821 agacgttacc gtcctgacca actcgctaca ggcgaccgac gttgccgccg tccattccgg
     5881 ctatgtcaaa taccgaaaac cgctgctcaa agccggcatc aaactctacg agctgcaacc
     5941 caaccatgcc gtccctgcca caaaagacaa aggcctgacc ggcagctccg taaccagcct
     6001 gcatgccaaa accttcattg tggacggcaa acgcatcttc atcggctcat tcaacctcga
     6061 cccccgttcc gcacggctca atactgaaat gggcgttgtt atcgaaagcc ccaaaatcgc
     6121 agaacagatg gagcgcaccc ttgccgatac cacacccaaa tacgcctacc gcgttaccct
     6181 cgacaggcac aaccgcctgc aatggcacga tcccgccacc cgaaaaacct acccgaacga
     6241 acccgaagcc aaactttgga aacgcatcgc cgcaaaaatc ctatccctgc tgcccataga
     6301 aggtttatta tagaaatgta gcggattaac aaaaaccagt acg
//
LOCUS       DAWITQ010000117         6302 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.117, whole genome shotgun sequence.
ACCESSION   DAWITQ010000117 DAWITQ010000000
VERSION     DAWITQ010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6302)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6302)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6302
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.117"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(506..751)
                     /locus_tag="WIX18_001632"
     CDS             complement(506..751)
                     /locus_tag="WIX18_001632"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238712.1"
                     /translation="MPSELQTAFPASQLQRERTHTAIPAKNRKSKKKPKIRHSRAGGN
                     PIRPVSVFFEFQVTSKPPFPQKRESRNSKLQEFIKND"
     gene            complement(764..1348)
                     /gene="rnhB"
                     /locus_tag="WIX18_001633"
     CDS             complement(764..1348)
                     /gene="rnhB"
                     /locus_tag="WIX18_001633"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEZ5238713.1"
                     /translation="MHILTAGVDEAGRGPLVGSVFAAAVILPEIFDLPGLTDSKKLSE
                     KKRDALAEMIKNQAVAWHVAAASPEEIASLNILHATMLAMKRAVDGLAVRPERIFIDG
                     NRIPEHLNIPAEAVVKGDSKIIEISAASVLAKTARDAEMYALAQRHPQYGFDKHKGYG
                     TKQHLEALKQYGVLPEHRRDFAPVRNLLAQQTLF"
     gene            complement(1416..3311)
                     /gene="mnmG"
                     /locus_tag="WIX18_001634"
     CDS             complement(1416..3311)
                     /gene="mnmG"
                     /locus_tag="WIX18_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HEZ5238714.1"
                     /translation="MTHMIYPKTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIET
                     LGQMSCNPSIGGIGKGHLVRELDALGGAMALATDKSGIQFRRLNASKGAAVRATRAQA
                     DRILYKAAIREMLENQENLDLFQQAVEDVTLDGDRISGVITAMGVEFKARAVVLTAGT
                     FLSGKIHIGLENYEGGRAGDPAAKSLGGRLRELNLPQGRLKTGTPPRIDGRTIDFSQL
                     TEQPGDTPVPVMSVRGNAEMHPRQVSCWITHTNTQTHDIIRSGFDRSPMFTGKIEGVG
                     PRYCPSIEDKINRFADKDSHQIFLEPEGLTTHEYYPNGISTSLPFDIQIALVRSMKGL
                     ENAHILRPGYAIEYDYFDPRNLKASLETKTIAGLFFAGQINGTTGYEEAAAQGLLAGA
                     NAVQYVREQDPLLLRREQAYLGVLVDDLITKGVNEPYRMFTSRAEYRLQLREDNADMR
                     LTEDGYKIGLVGEAQWRMFNEKREAIEREIQRLKTTWYTPQKLAEDEQIRVFGQKLSR
                     EANLHDLLRRPNLDYAALMTLEGAMPSERLSAEVVEQVEIQVKYQGYIDRQNEEIDSR
                     RDIETLKLPEDIDYSKVKGLSAEVQQKLNQHKPETVGQASRISGVTPAAVALLMVHLK
                     RGFKDAK"
     gene            complement(3636..5063)
                     /locus_tag="WIX18_001635"
     CDS             complement(3636..5063)
                     /locus_tag="WIX18_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEZ5238715.1"
                     /translation="MNENFTEWLHGWVGAINDPMWSYLVYMLLGTGLFFTVTTGFVQF
                     RLFGRSIKEMLGGRKQGDDPHGITPFQAFVTGLASRVGVGNIAGVAIAIKVGGPGAVF
                     WMWVTALIGMSSAFVESSLAQLFKVRDYDNHHFRGGPAYYITQGLGQKWLGVLFALSL
                     IFCFGFVFEAVQTNTIADTVKAAWGWEPHYVGVALVILTAPIIFGGIRRISKAAEIVV
                     PLMAVLYLFIALFIILTNIPMIPDVFGQIFSGAFKFDAAAGGLLGGLISQTMMMGIKR
                     GLYSNEAGMGSAPNAAAAAEVKHPVSQGMIQMLGVFVDTIIVCSCTAFIILIYQQPYG
                     DLSGAALTQAAIVSQVGQWGAGFLAVILFMFAFSTVIGNYAYAESNVQFIKSHWLITA
                     VFRMLVLAWVYFGAVANVPLVWDMADMAMGIMAWINLVAILLLSPLAFMLLRDYTAKL
                     KMGKDPEFKLSEHPGLKRRIKSDVW"
     gene            5223..6212
                     /gene="pdxA"
                     /locus_tag="WIX18_001636"
     CDS             5223..6212
                     /gene="pdxA"
                     /locus_tag="WIX18_001636"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HEZ5238716.1"
                     /translation="MKQPVFAVTSGEPAGIGPDICLDLAFARLPCRCAVLGDKNLLRA
                     RAEALGKSVVLRDFDPESGGAAYGELEVLHIPAVEAVEAGKLNPANAAYVLQLLDTAL
                     AGISDGIFDGIVTAPLHKGIINDARASTGFFSGHTEYLAEKSGTGQVVMMLAGKGLRV
                     ALVTTHLPLKDVAAAITQPLIESVARILHHDLKHKFGIKNPKILVAGLNPHAGEGGHL
                     GHEETDTIIPALENLRREGINLAGPYPADTLFQPFMLEGADAVLAMYHDQGLPVLKYH
                     SFGQGVNITLGLPFIRTSVDHGTALDLAATGRADSGSLITAVETAVEMARGSL"
BASE COUNT         1330 a         1660 c         1807 g         1505 t
ORIGIN      
        1 tgatttttgt taatccacta tatcgtcatt cccgcaaaaa caaaaaaatc aaaaacacaa
       61 aactgaaata tcgtcattcc cgtgcaggcg ggaatctagg tctgtcggta cggaaactta
      121 tcgggaaaaa cggtttttcc aaccctgaga ctccggattc ctgttttcgc gggaatccgg
      181 ttttttgagt ttcagtcatt tttgataaat tcttgcagct ttgagtttct agattcccgc
      241 ttttgcggga atgacgcgga aaagttgctg tgatttcgga taaattttcg tcacgcttaa
      301 tttctgtttt atccgataaa tgcctgcaat ctaaaatttc gtcattcccg caaaaacaaa
      361 aaatcaaaac agaagcctaa aatttcgtca ttcccgcgaa ggcgggaatc taggtctgtc
      421 ggtacggaaa cttatcgggt aaaacggttt tgccagccct gagactccgg attcctgttt
      481 tcgtaggaat ccggtttttt gagcttcagt catttttgat aaattcttgc agctttgagt
      541 ttctagattc ccgcttttgc gggaatggcg gtttggaagt tacctgaaat tcaaaaaaaa
      601 cggaaaccgg acggattgga ttcccgcctg cgcgggaatg acggatttta ggtttctttt
      661 ttgattttct gtttttcgcg ggaatggcgg tatgggttct ttctctttga agttgcgatg
      721 ctggaaatgc cgtctgaagt tcagacggca tttttgtgcc ggtttaaaac agcgtctgct
      781 gcgcgagcag gtttctgacg ggggcgaagt cgcggcgatg ttcgggcagc acgccgtatt
      841 gtttgagggc ttccagatgc tgcttcgtgc cgtaaccttt gtgtttgtcg aaaccgtatt
      901 ggggatggcg ttgcgccagt gcgtacattt ccgcatcgcg tgcggtcttt gccaaaacgg
      961 atgcggcgga gatttcgatg attttgctgt cgcctttgac gacggcttcg gcagggatgt
     1021 tcaaatgttc gggaatgcgg ttgccgtcga tgaatattct ttcgggacgc acagccaaac
     1081 cgtcaacggc gcgtttcatc gcgagcatgg tggcgtgcag gatgttgagg ctggcgattt
     1141 cttcgggcga ggcggcggca acgtgccacg caaccgcctg attttttatc atttcggcaa
     1201 gcgcgtcgcg ttttttctcg ctgagttttt tggagtcggt cagtccgggc aggtcgaata
     1261 tttccggaag gatgacggcg gcggcaaaca cgctgccgac taaaggcccg cgccctgcct
     1321 cgtccacgcc ggcggtcagt atgtgcatga tgtttcctgt cgggatggcg cgatgccgtc
     1381 tgaacggtgt ttcagacggc atcgcgccga tgtgtttatt tcgcgtcttt aaacccgcgc
     1441 ttcaaatgca ccatcagcaa tgccactgcc gcaggggtta cgccggaaat gcggcttgcc
     1501 tgcccgacgg tttcgggttt gtgctggttg agcttttgct gcacttctgc cgacaaacct
     1561 ttaactttgc tgtaatcgat atcctcgggc agctttaagg tttcgatgtc gcggcggctg
     1621 tcgatttctt cgttttggcg gtcgatatag ccttggtatt tgacttggat ttcgacttgt
     1681 tcgaccactt cggcggagag gcgttcagac ggcatcgcgc cttcgagcgt catcagcgcg
     1741 gcgtagtcga ggttcgggcg gcgcaggagg tcgtgcaggt tggcttcgcg gctgagcttt
     1801 tgcccgaata cgcggatttg ttcgtcttcg gcgagttttt gcggcgtgta ccacgttgtt
     1861 ttcaaacgtt ggatttcgcg ttcgatggct tcgcgttttt cgttgaacat gcgccattgc
     1921 gcttcaccca ccaagccgat tttgtagccg tcttcggtca ggcgcatatc ggcgttgtct
     1981 tccctgagtt gcaggcggta ttcggcacgg ctggtgaaca ttcggtaggg ttcgttcacg
     2041 cctttggtga tgaggtcgtc caccaatacg ccgagatagg cttgttcgcg gcgcagcagg
     2101 agcgggtctt gttcgcggac gtattgcacg gcgttcgcgc ctgccagcag tccttgcgcg
     2161 gcggcttctt cataacctgt cgtaccgttg atttgcccgg cgaaaaacaa tccggcaatg
     2221 gttttggttt cgaggcttgc tttgaggttg cgcggatcga agtagtcgta ttcgatggcg
     2281 tagccggggc gcaggatatg ggcgttttcc aaacctttca tactgcggac gagcgcgatt
     2341 tggatgtcga acggcaggct ggtggagata ccgttggggt agtattcgtg cgtagtcagg
     2401 ccttcgggtt ctaggaaaat ctggtggctg tctttgtcgg cgaagcggtt gattttgtct
     2461 tcgatagacg gacaataacg cgggcccacg ccttcgattt tgccggtaaa catcgggctg
     2521 cggtcgaagc ctgagcggat gatgtcgtgg gtttgcgtgt tggtatgcgt aatccagcag
     2581 gacacttggc gcgggtgcat ttcggcgttg ccgcgtacgg acatgacggg aacgggcgtg
     2641 tcgccgggct gttcggtcag ttgggagaag tcaatcgtgc gtccgtcgat gcgcggcggc
     2701 gtgccggttt tcagacggcc ttgcggcagg ttcaattcgc gcaaacgtcc gcccagcgat
     2761 ttggcggcgg ggtcgccggc gcgtccgccc tcgtagtttt ccaaaccgat gtggattttg
     2821 ccggacaaaa acgtgcctgc ggtcaacacc acggcgcgtg ctttaaactc cacgcccatc
     2881 gcggtgatta cgcctgaaat gcggtcgcca tcgagcgtta cgtcttcgac ggcttgttgg
     2941 aaaaggtcga ggttttcttg gttttccaac atttcgcgga tggcggcttt atataggata
     3001 cgatccgcct gcgcgcgcgt ggcccgtact gccgcgcctt tgctggcgtt cagacggcgg
     3061 aactggatgc cggatttgtc ggttgccaac gccatcgcgc cgccgagcgc gtcgagttcg
     3121 cgcaccaaat gccctttgcc gatgccgccg atggaagggt tgcacgacat ttgtccgagc
     3181 gtttcaatat tgtgtgtgag caaaagcgtc tgcgcgccca tacgggcggc ggcgagcgcg
     3241 gcttctgtgc cggcgtgtcc gccgccgacg acgataacgt cgtaggtttt ggggtaaatc
     3301 atgtgggtca tgtgtgtatt gcctgacggt gtttcagacg gcatttatag tggattaaca
     3361 aaaaccagta cagcgttgcc tcgccttagc tcaaagagaa cgattctcta aggtgctgaa
     3421 gtaccaagtg aatcggttct gtactatctg tactgtctgc ggcttcgccg ccttgtcccg
     3481 atttttgtta aaccactata ttcaatatgc cgtctgaaaa acgaaatgga ttcaaaagta
     3541 aagggttggg attgtacgct tgttcgccct gtttttacag tgtgcggaaa gggaaaagcc
     3601 gcttcgcggg gaagcggctc cggtaagggc gggatttacc aaacgtcgga tttgatacgg
     3661 cgtttcaggc ccggatgttc ggaaagtttg aactcggggt ctttgcccat tttcagcttg
     3721 gcggtgtaat cgcgcagcag cataaacgcc agtggcgaga gcagcaggat ggcgacaagg
     3781 ttgatccacg ccataatgcc catcgccata tccgccatat cccagaccaa aggcacattg
     3841 gcaaccgcgc cgaaatagac ccacgccaaa accagcatac ggaaaacggc ggtaatcagc
     3901 caatggcttt tgatgaattg gacgttggac tcggcatagg catagttgcc gataacggtg
     3961 gaaaaggcaa acataaacag gatgacggcg aggaagcccg cgccccattg ccccacttgg
     4021 ctgacaatcg ccgcctgcgt cagcgccgca ccgctcaaat cgccgtaagg ctgttggtaa
     4081 atcaagatga tgaaggcggt gcaagaacaa acgatgatgg tatcgacaaa cacgcccagc
     4141 atttgaatca taccttgcga aacagggtgt ttcacttcgg cggcggcggc ggcgttcggc
     4201 gcggaaccca tacccgcctc gttggaatac aggccgcgtt tgatgcccat catcatcgtt
     4261 tgcgaaatca gaccgccgag taagccgcct gctgccgcgt cgaatttgaa cgcgcccgaa
     4321 aaaatctgac cgaacacgtc cggaatcatc ggaatattgg tcaaaatgat gaaaagcgcg
     4381 ataaagaggt acaaaaccgc catcaggggg acgacgattt ccgccgcttt agatatgcgc
     4441 ctgatgccgc cgaagataat cggcgcggtt aaaatcacca gggcgacgcc gacataatga
     4501 ggctcccaac cccacgccgc tttgacggta tcggcaatgg tattggtctg aaccgcttca
     4561 aacacaaagc cgaaacagaa aatcaggctc agggcgaaca acacgcccag ccatttctgc
     4621 cccagccctt gagtgatgta gtaggcaggg ccgccccgga aatggtggtt gtcgtagtcg
     4681 cggactttaa agagctgcgc cagcgaagat tcgacaaacg ccgaactcat accgattaag
     4741 gcggttaccc acatccaaaa caccgcgccc ggtccgccga ctttgatggc gatggccacg
     4801 cccgcgatat tgcccacgcc cacgcggctg gcaaggccgg ttacaaatgc ctgaaacggc
     4861 gtgatgccgt gagggtcgtc cccctgtttg cggccgccga gcatttcttt gatgctgcgc
     4921 ccgaacaggc ggaattggac aaagcccgtg gttacggtga agaaaagccc cgtacccaaa
     4981 agcatataaa ccaagtatga ccacatcgga tcgttgatgg cgccgaccca gccgtgcagc
     5041 cattcggtaa agttctcgtt catatcgctt ccttaaagtt gaaactcgca catattggcg
     5101 gtatgcaagc agggtttaaa ttttgtaaac gcccattcta gcagattgtc aacaaaatca
     5161 gaaaaattta catcgccgcg cggctgcggc gttagaatcg cattttgttt ggagcaaaca
     5221 cgatgaaaca gcctgttttt gccgttactt ccggcgagcc tgccggcatc ggccccgata
     5281 tttgtttgga cttggcgttt gcacgcctgc cctgccgctg cgcggtattg ggcgacaaaa
     5341 acctattgcg cgcgcgcgcc gaagccttgg gcaaaagcgt cgtcctgcgc gacttcgatc
     5401 cagaatcagg cggcgcggca tacggcgagc tggaagtgct gcacatccct gccgtcgaag
     5461 cggttgaggc gggcaaactc aatcccgcca acgccgccta tgtgctgcaa cttttggaca
     5521 ccgcgctcgc aggcatttca gacggcattt tcgacggcat cgttaccgcg ccgctgcaca
     5581 aaggcatcat caacgacgcg cgcgcaagca caggtttttt cagcggacac accgaatatc
     5641 tggcggaaaa aagcggcacg gggcaggtcg tgatgatgct tgccggcaaa ggcctgcgcg
     5701 tcgccctcgt aacgacccac ctgccgctga aagacgttgc cgccgccatc acgcaaccgc
     5761 tgattgaaag cgtcgcacgc attttgcatc acgacttaaa acacaaattc ggcatcaaaa
     5821 atcccaaaat ccttgtcgcc ggacttaatc cccacgccgg cgaaggcgga cacctcggac
     5881 acgaagaaac cgacaccatt atccctgcat tggaaaacct gcgccgcgaa gggataaacc
     5941 ttgccggccc gtatccggcg gacacattgt tccagccgtt tatgctcgaa ggtgcggatg
     6001 ccgtattggc gatgtaccac gaccaagggc tgcccgtgtt gaaataccac agtttcgggc
     6061 agggcgtgaa catcacgctg ggtctgccct ttatccgcac ctctgtcgat cacggcaccg
     6121 cgctcgattt ggcggcaacc ggcagggcgg attccggcag cctgataact gccgtggaga
     6181 ccgccgtcga gatggcgcgc ggcagccttt aaagatgata aaagacccgt catttccgcg
     6241 caggcggcat cgtccaccct ccgccgtcat tcccgcgcag gcgggaatcc agaccttcgg
     6301 gc
//
LOCUS       DAWITQ010000118         6245 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.118, whole genome shotgun sequence.
ACCESSION   DAWITQ010000118 DAWITQ010000000
VERSION     DAWITQ010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6245)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6245)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6245
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.118"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..130)
                     /locus_tag="WIX18_001637"
     CDS             complement(<1..130)
                     /locus_tag="WIX18_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2061 domain-containing protein"
                     /protein_id="HEZ5238717.1"
                     /translation="MLKTLTFAALHFTTAFSVTYVLTGSIGVSGAVALVDPLINTVV"
     gene            253..1206
                     /locus_tag="WIX18_001638"
     CDS             253..1206
                     /locus_tag="WIX18_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HEZ5238718.1"
                     /translation="MNHKKIVVLDADTLPGRAFHFDFPHELAVYGTTGADETAERVRD
                     AHIVITNKVMISADIIAANPQLELIAVSATGVNNVDIGAAEAAGVAVCNVRAYGNESV
                     AEHAFMLMIALMRNLPAYQRDVAAGLWEKSPFFCHYGAPIRDLNGKTLAVFGRGNIGR
                     TLAGYAQAFGMEVVFAEHKHAPDVREGYVSFEDAVRTADVLSLHCPLNAQTENMIGEN
                     ELRQMKPGAVLINCGRGGLVDENALLAALKYGQIGGAGVDVLTNEPPKNGNPLLNARL
                     PNLIVTPHTAWASREALDRLFDILLANIHAFVKGEAQNRVV"
     gene            complement(1280..3337)
                     /gene="metG"
                     /locus_tag="WIX18_001639"
     CDS             complement(1280..3337)
                     /gene="metG"
                     /locus_tag="WIX18_001639"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEZ5238719.1"
                     /translation="MTRKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECY
                     YCCADDTHGTPVMLAAQKQGIAPEDMIAKVREEHLADFTGFNIGYDNYYSTHSPENKQ
                     FSQDIYRALKANGKIESRVIEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCG
                     TTYSPTELINPYSAVSGAKPELRESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPE
                     ALNKMKEWLGEGEETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNL
                     CDRIGIDFDEYFKAGSQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLT
                     VDGQKMSKSRGTFITAKSYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSD
                     LVGKYVNIAARASGFIAKRFEGKLKDVSDSALLAKLTAQSEAIAECYENREYARALRD
                     IMALADIVNEYVDANKPWELAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPQTATN
                     AARFLNLDAITWTNTRVTLGKHAINKYKHLMQRVEQKQVDDLIEANKQSIAAAAAPAA
                     EEGKYEKVAEQASFDDFMKIDMRVAKVLNCEAVEGSTKLLKFDLDFGFEKRIIFSGIA
                     ASYPNPAELNGRMVIAVANFAPRKMAKFGVSEGMILSAATADGKLKLLDVDTGAQPGD
                     KVG"
     gene            complement(3453..5291)
                     /gene="glmS"
                     /locus_tag="WIX18_001640"
     CDS             complement(3453..5291)
                     /gene="glmS"
                     /locus_tag="WIX18_001640"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEZ5238720.1"
                     /translation="MCGIVGAIRAHHNVVDFLTDGLKRLEYRGYDSSGIAVNTDGKIK
                     RVRRVGRVQLMEDAAREKGIAGSIGIGHTRWATHGGVTEPNAHPHISGGMIAVVHNGI
                     IENFESERKRLEGLGYRFESQTDTEVIAHSINHEYAQNGGRLFEAVQEAVKRFHGAYA
                     IAVIAQDKPDELVVARMGCPLLVALGDDETFIASDVSAVIAFTRRVAYLEDGDIALLA
                     SDGIKRLTDKSGLPAERKVKVSELSLASLELGPYSHFMQKEIHEQPRAIADTAEVFLD
                     GGFIPENFGKNAKSVFESIRSVKILACGTSYYAALTAKYWLESIAKIPADVEIASEYR
                     YRSVIADPDQLVITISQSGETLDTMEALKYAKSLGHRHSLSICNVMESALPRESSLVL
                     YTRAGAEIGVASTKAFTTQLVALFGLAVTLAKVRGLVSEEDEARYTEELRQLPGSVQH
                     ALNLEPQIAAWAQQFAKKTSALFLGRGIHYPIALEGALKLKEITYIHAEAYPAGELKH
                     GPLALVDENMPVVVIAPNDSLLDKVKANMQEVGARGGELFVFADLDSNFNATKGVHVI
                     RAPRHVGKLSPVVHTIPVQLLAYHTALARGTDVDKPRNLAKSVTVE"
     gene            5573..6091
                     /locus_tag="WIX18_001641"
     CDS             5573..6091
                     /locus_tag="WIX18_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238721.1"
                     /translation="MKQMLLAVGVAAVLAGCGKDAGGYEGYWREKSDKKEGMIAVKKE
                     KGNYFLNKINVVTGKEESMLLSEKDGELSINTGIGEIPIKLSDDGKELYVERRQYVKT
                     DAAMKDKIIAHQKKCGQTAQAYLDARNALPSNQTYQQRQAAIEQLKRRFEAEFDELEK
                     EIKCNGKLTLLF"
BASE COUNT         1340 a         1474 c         1892 g         1539 t
ORIGIN      
        1 aaacgacggt gttgattagg gggtcgacca gcgcgaccgc gccagatacg cctatactgc
       61 ccgtcagcac ataggttaca ctgaaggcgg tggtgaaatg cagtgcggca aaagtcaggg
      121 ttttaagcat catcctctcc cgaattgaaa atttacggag agatgataaa gattatcatc
      181 aggccgtgcc ggtttaaatt tgctatttac tgttagtgta aataaatcaa ttttaaagta
      241 aggatagaaa tgatgaatca caaaaagata gtcgttctgg atgcggatac tttgcccggc
      301 agggcttttc acttcgattt tccgcacgag cttgcggttt acggtacgac aggtgcggat
      361 gaaacggcgg aacgggtgcg cgatgcacat attgtcatta ccaataaggt aatgatttcc
      421 gccgacatta ttgcggctaa tccgcagttg gagctgattg ccgtcagtgc gaccggtgtg
      481 aacaatgtcg atattggggc ggcggaggcg gcgggcgttg cggtatgcaa tgtccgcgcc
      541 tacggaaacg aatcggttgc ggaacacgcc tttatgctga tgattgcctt gatgcggaat
      601 ctgcctgcct atcagcgtga tgttgcggca ggattatggg aaaagtcgcc gtttttctgc
      661 cattacggcg cgccaattcg ggatttgaac ggtaaaacgc tggcggtttt cggacgcggc
      721 aatatcggac ggacgcttgc cggatacgcg caggcgttcg gtatggaggt ggtgtttgcc
      781 gaacacaaac acgcgcccga cgtgcgcgaa ggctatgttt cctttgaaga tgcggtacgg
      841 actgccgacg tgttgtcgct gcactgtccg ctaaacgccc aaactgaaaa tatgataggc
      901 gaaaacgaat tgcggcagat gaagcctggc gcggttttaa tcaattgtgg gcgcggcggg
      961 ctggtggatg aaaacgcgct gcttgccgca ctcaaatacg ggcagatcgg cggggctggt
     1021 gtcgatgttt tgacgaatga gccgcccaaa aacggcaatc ccttgctgaa tgcacgactt
     1081 cccaatctga ttgttacgcc gcataccgcg tgggcaagcc gcgaggcttt ggacaggctg
     1141 ttcgatatat tgttggcgaa cattcacgcc tttgtgaaag gcgaggcgca aaaccgggtg
     1201 gtttgagctt gtcgggattg cggaaaaaat gccgtctgaa cgcctcaagg gttcagacgg
     1261 catttcttga gattcccgtt taaccgactt tgtcgcccgg ctgcgcgcct gtatccacat
     1321 ccaagagctt cagtttcccg tctgccgtgg cggcactcaa aatcatgcct tcagatacac
     1381 cgaattttgc cattttgcgc ggggcgaagt tggcgacggc gatgaccatg cggccgttca
     1441 attcggcagg gttcgggtaa gacgcggcga tgccggagaa gataatgcgt ttttcaaaac
     1501 caaaatcgag gtcgaatttc aaaagtttgg tgctaccctc gacggcttcg cagttcaata
     1561 ctttggcgac gcgcatgtcg attttcatga agtcgtcgaa gctcgcttgt tcggcgactt
     1621 tttcgtattt gccctcttcg gcggcaggtg cggctgcggc ggcgatgctt tgtttgttgg
     1681 cttcgattaa atcgtccact tgtttttgct ccactcgttg cattaaatgt ttgtatttgt
     1741 tgatggcgtg tttgcccaag gttacccttg tgttcgtcca agtaatcgcg tccagattga
     1801 ggaaacgcgc ggcattggtg gcggtttgcg gcaatacggg ggcgaggtag gcggtcagca
     1861 tcgtaaaggc gttgatgagt tcgctgcata cttcgtgcag gcgttcgtct tggccttctt
     1921 gtttggcgag ttcccaaggt ttgttggcat caacgtattc attaacaatg tctgccaatg
     1981 ccatgatgtc gcgcagggcg cgggcgtatt cgcggttttc gtagcattcg gcaatggctt
     2041 cgctttgcgc agtcagtttt gccagcaatg cgctgtcgga aacgtctttg agttttcctt
     2101 caaagcgttt ggcgatgaaa cctgacgcgc gggcggcgat gttgacgtat ttgccgacga
     2161 ggtcgctgtt gacgcgcgag ataaagtctt gcaggttcaa atcgatgtct tcgattttgc
     2221 tgttgagttt ggcggcgatg tagtagcgca tccactcggg gtttaggcct tgttccagat
     2281 aggatttggc ggtaataaac gtgccgcgcg atttggacat tttttgtccg tccacggtca
     2341 aaaagccgtg tgcgtacacg ccggtcgggg cgcggtggcc ggagaaatgc agcatggcgg
     2401 gccagaacag ggcgtggaaa tagaggatgt ctttgccgat gaagtggtac atctcggttt
     2461 ggctgccggc tttgaagtat tcgtcgaaat cgatgccgat gcggtcgcac aggtttttaa
     2521 acgatgccat gtagccgacg ggcgcgtcca gccagacgta gaagtatttg cccggcgcgt
     2581 cggggatttc aaaaccgaaa tacggcgcgt cgcgggaaat gtcccagtcg gacagggtgg
     2641 tttcttcgcc ttcgcccagc cattctttca ttttgttgag ggcttctggt tgcagatggg
     2701 gtttgccgtc gtgcgggttg ttgccggaag tccatgcttt gaggaagtcg gcgcattcgc
     2761 ccagtttgaa gaagaagtgt tcggattcgc gcaattcggg tttcgcgccg gaaacggcgg
     2821 aatacgggtt aatcagttcg gtcggggaat aggtcgtgcc gcagacttcg cagttgtcgc
     2881 cgtattggtc ttgggcgtgg catttcgggc attcgccttt aacgaagcgg tcgggcagga
     2941 acatttgttt ttcggggtcg aaaagctgct cgatgacgcg gctctcaatc ttgccgttgg
     3001 ctttcagcgc gcggtaaata tcttgggaaa actgtttgtt ttcaggggaa tgggtgctgt
     3061 aataattgtc gtagccgatg ttgaaaccgg taaagtcggc gaggtgttct tcgcgcactt
     3121 tggcaatcat gtcttcgggc gcgatgcctt gtttttgcgc ggcaagcatc acgggcgtgc
     3181 cgtgggtgtc gtcggcgcag cagtagtagc attcgttgcc gcgcagtttt tggaagcgca
     3241 cccaaacgtc ggtttggatg tgttcgacca tgtggccgag gtggatgctg ccgttggcat
     3301 agggcagggc ggaggtaact aagattttgc gtgtcatatt gtgctttgca aacaatgggt
     3361 aaaggcggat tataccgcaa atcaaacggg gaaatgccgt ctgaagcctg aaaaatcggg
     3421 cttcagacgg catttttgca aaacggcggg agttattcga cggttacgga tttcgccagg
     3481 ttgcgcggct tgtccacatc ggtaccgcgt gcgagggcgg tgtggtaggc gaggagctgc
     3541 acggggatag tatgcacgac gggggacagt ttgccgacgt ggcgcggtgc gcggataacg
     3601 tgcacacctt tggtggcatt aaaattactg tcgaggtcgg caaagacgaa aagttcgccg
     3661 ccgcgcgcgc cgacttcctg catattggct ttgactttgt ccaacaggct gtcgttgggt
     3721 gcgatgacga cgacgggcat gttttcgtcc accaaggcaa gcggcccgtg cttcagttcg
     3781 ccggcaggat aggcttcggc gtggatgtag gtgatttcct tcagttttaa cgcgccttcg
     3841 agggcaatcg ggtaatggat gccgcgcccc aaaaacagcg cgctggtttt cttggcaaac
     3901 tgttgcgccc aggcggcaat ttgcggttcg aggtttaaag cgtgctgcac gctgccggga
     3961 agctggcgga gttcttcggt gtaacgtgct tcgtcttctt cggaaaccaa accgcgcact
     4021 ttcgccagcg ttaccgccaa accgaacagc gcaaccagct gcgtggtaaa tgctttggtt
     4081 gaggcgacgc cgatttccgc accggcacgg gtataaagca cgaggctgct ttcgcgcggc
     4141 agggcggatt ccatcacgtt gcagatggag aggctgtggc ggtgtcccaa ggattttgcg
     4201 tatttcaacg cctccatcgt gtccagcgtt tcgccggatt gggaaatggt aatgaccagt
     4261 tggtccggat cggcaatcac gctgcggtat cggtattcgc tggcgatttc gacatcggcc
     4321 gggattttgg cgatggattc caaccaatat ttggcggtca gcgcggcgta ataggacgtg
     4381 ccgcaggcaa ggattttgac gctgcggatg ctttcaaaca cgcttttggc gtttttgccg
     4441 aagttttcgg ggatgaagcc gccgtcgagg aaaacctccg ccgtgtctgc aatcgcgcgc
     4501 ggctgctcat ggatttcctt ttgcataaag tggctgtacg gtcccagttc caaagaggcg
     4561 agcgagagtt cggatacctt gactttgcgt tcggcaggca ggccgctttt atcggtcagc
     4621 cgtttgatgc cgtctgaagc cagcagcgcg atgtcgccgt cttcgaggta cgccacgcgg
     4681 cgcgtaaagg cgatgacggc ggatacgtcc gaagcgataa aggtttcatc gtcgcccaaa
     4741 gcgaccaaaa gcgggcagcc catacgcgcc acaactaatt catcaggctt gtcttgggca
     4801 ataaccgcga tggcgtatgc gccgtggaaa cgtttgaccg cttcctgtac cgcttcaaac
     4861 agcctgccgc cgttttgcgc gtattcgtga ttgatgctgt gtgcgatgac ttcggtatcc
     4921 gtttgcgatt caaaccggta tcccaaacct tccaagcgtt tgcgttcgct ttcaaagttt
     4981 tcgatgatgc cgttgtggac gacggctatc atcccaccgg aaatatgcgg atgggcattc
     5041 ggctcggtaa cgccgccgtg tgtcgcccaa cgcgtatgtc cgatgccgat gctgcccgct
     5101 attccttttt cacgggcagc gtcctccata agctgcacgc gtccgacgcg gcgcacgcgt
     5161 ttgattttgc cgtcggtgtt gacggcaata cctgatgagt cataaccccg gtattcgagg
     5221 cgtttgaggc cgtcggtcag aaaatcgacg acgttgtgat gggcgcggat ggcgccgacg
     5281 ataccgcaca taactgttcc ttagtatcag gttgaaaaaa aacaggtgcg gacggctccc
     5341 gtgccgcacc ttccgcttcg gattataaac cgcctcccgc gccgaaaaac agcaaaatgc
     5401 cgtctgaagg cttgggcttg ctcaaaaaag ggagggattt ccctgtttat ccgagatggg
     5461 cgttcagacg gcattgcctg ccgccggttt atagttttta caaatcaata ttgacaagct
     5521 gaaaaaaaaa aacaatatac tcgctcggtc ttaatgttaa aggagtatgg aaatgaaaca
     5581 aatgctttta gccgtcggcg tggcggcggt gttggcgggc tgcggcaagg atgccggcgg
     5641 ttacgagggt tattggcgcg aaaaatcgga caaaaaagag ggtatgattg ccgtcaaaaa
     5701 agaaaaaggc aattacttcc ttaataaaat caacgtggtt acaggtaagg aagaatctat
     5761 gcttttgtct gaaaaagacg gcgagctttc gataaacacg gggatagggg aaatcccgat
     5821 caaactttcc gacgacggga aagagctgta tgtcgaacgc aggcagtatg tcaaaaccga
     5881 tgcggcgatg aaggacaaaa tcatcgccca tcagaaaaag tgcggacaaa cggcacaggc
     5941 atatctcgac gcgcgaaatg cgttgccgtc aaaccaaacg tatcagcagc gtcaggcggc
     6001 gatcgagcaa ttgaaacggc ggtttgaagc cgagtttgac gaattggaaa aagaaatcaa
     6061 atgcaacggc aaactgacat tgttgtttta gcgtaggaca accgggagga tgccgccgtc
     6121 cgaatcggat gtgcggtttc cgtaccggta cgggcgggca ggaatgtccg ctttttttgt
     6181 tcggacgcgt ttgaatatcc gtccgattcc gtccgtttgc aaagggtatt tttgttcggg
     6241 cggaa
//
LOCUS       DAWITQ010000119         6237 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.119, whole genome shotgun sequence.
ACCESSION   DAWITQ010000119 DAWITQ010000000
VERSION     DAWITQ010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6237)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6237)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6237
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.119"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            20..403
                     /locus_tag="WIX18_001642"
     CDS             20..403
                     /locus_tag="WIX18_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HEZ5238722.1"
                     /translation="MEPSSYAAEKKGKGGIRRVINAFGYSIDGIAAAYRYEAAFRQVL
                     WLNVLLVCAAFFWVSETAVRLPLIIASFVSVIVELFNTAVEAAVDHTSTEKHELAKRA
                     KDAGSAAQLFAMLMLAAVWLSALFG"
     gene            517..990
                     /locus_tag="WIX18_001643"
     CDS             517..990
                     /locus_tag="WIX18_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HEZ5238723.1"
                     /translation="MKKLLAAVMMAGLAGAVSAAGVHVEDGWARTTVEGMKIGGAFMK
                     IHNDEAKQDFLLGGSSPVADRVEVHTHINDNGVMRMREVKGGVPLEAKSVTELKPGSY
                     HVMFMGLKKQLKEGDKIPVTLKFKNAKAQTVQLEVKTAPMPAMNHGHHHGEAHQH"
     gene            1116..2219
                     /gene="mnmA"
                     /locus_tag="WIX18_001644"
     CDS             1116..2219
                     /gene="mnmA"
                     /locus_tag="WIX18_001644"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HEZ5238724.1"
                     /translation="MNTTANPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWED
                     DDNDEYCSIKQDSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDV
                     LCNAEIKFKCFLDYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLK
                     PFQLERAIFPLGGLEKPEVRRLAAEFKLPTAAKKDSTGICFIGERPFREFLQKYLPTD
                     NGKMVTPEGKTVGEHVGLMFYTLGQRKGLGIGGAGEPWFVAAKDLTKNELIVVQGHDH
                     PLLYTRSLVMNDLSFTLPERPKAGRYTCKTRYRMADAPCELRYLDEETAELVFDEPQW
                     AVTPGQSAVLYEGDVCLGGGIIQSTDKPVIITR"
     gene            2290..3960
                     /locus_tag="WIX18_001645"
     CDS             2290..3960
                     /locus_tag="WIX18_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEZ5238725.1"
                     /translation="MKKIWLDSYEKGVSAEIDITQYNSVSDVFRQSVEKFADQPAFQN
                     MGKTLTYAETGKLATDFASYLQNVLKLPRGERVAIMLPNVLQYPVALFGILQAGLVAV
                     NTNPLYTPRELEHQLKDSGATAIIVLENFANTLELVLPRTQIKHVIVASVGEMFGLLK
                     GSLINFIIRKIKKMVPEYRIRETISFQTALKEGAKHVFQPVALNREDTALLQYTGGTT
                     GVAKGAVLSHGNICANMLQAKEWIKNQLREGKETVIAALPLYHIFALTVNLMIFANAG
                     SKIILITNPRDMKGFIGELKKQRVNVFIGVNTLFNAMVNRPDFAEVDFSGLRLTLGGG
                     MATQKAVAEKWKKITGTPIVEAYGLTEASPGVCCNPLNIESYSGSIGLPVSSTEVELR
                     DANGKEVPVGQPGELWVKGPQVMQGYWNRPEETAKAIDARGFLETGDIAVMDEKGWLK
                     LVDRKKDLVVVSGFNVYPNEIEEVIAHHGKVMEVACIGVPDEKTGEALKVFVVKKDPS
                     LTKEELIAFCRTELTAYKVPKNIEFRDELPKSNVGKILRRELRQSTGK"
     gene            4072..5706
                     /locus_tag="WIX18_001646"
     CDS             4072..5706
                     /locus_tag="WIX18_001646"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEZ5238726.1"
                     /translation="MTKFIFVTGGVVSSLGKGIAAASIAAILESRGLNVTMLKLDPYI
                     NVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIDSTMTRRNSFSTGQVYENVIAKE
                     RRGDYLGGTVQVIPHITDEIKRRIHEGAAGYDVAIVEIGGTVGDIESLPFLEAIRQMR
                     SQLGRNNTLFAHLSYVPYIAAAGEIKTKPTQHTVKEMLSIGLQPDILICRMDRTMPAD
                     ERRKIALFCNVEERAIVGSYDVDSIYECPEMLHDQGIDNIITEQLQLNVQQADLTAWK
                     KIVHAIQNPKHTVKIAMVGKYVDLTESYKSLIEALKHAGIHTETDVQITFVDSESIEK
                     NNGDVSMLKDMDAILVPGGFGSRGVEGKIAAVRYARENNVPYLGICLGMQIALIEYAR
                     DVAGLKGANSTEFDLKCAAPVVALIDEWQTADGSVETRDESADLGGTMRLGAQEVELK
                     AGSLAAKIYGSEHIRERHRHRYEVNNNYVPTLEQAGLVIGGVSAGRERLVETIELPNH
                     PWFFACQFHPEFTSNPRKGHPLFTAFVKAALNNKKA"
     gene            5934..>6237
                     /locus_tag="WIX18_001647"
     CDS             5934..>6237
                     /locus_tag="WIX18_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ5238727.1"
                     /translation="MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTR
                     YLRDHRGRPAYPLLSMFKAVLLGQWHSLSVPELEHSLITRIDFNLFCRFDELSIPDY"
BASE COUNT         1630 a         1721 c         1552 g         1334 t
ORIGIN      
        1 acattttgaa aggataccga tggaaccttc ctcctacgcg gcagaaaaaa aaggcaaagg
       61 cggcatcagg cgcgtcatta acgcattcgg ctattcgata gacggcatcg ccgccgccta
      121 ccgttacgaa gcggcattcc gtcaggtttt gtggctgaac gtactgctgg tgtgcgcggc
      181 atttttttgg gtttccgaaa ccgccgtccg cctgccgttg attatcgcgt cttttgtgtc
      241 ggtcattgtc gaactgttca acaccgccgt cgaagctgcc gtcgatcata cttcgaccga
      301 aaaacacgag ctggccaaac gcgccaaaga cgcaggttct gccgcacaat tgttcgcgat
      361 gctgatgttg gcggcggttt ggctgtctgc cctgttcggg taaaacgctt gcagcaggat
      421 ttgtaatcct ttaggattag tatgtggtat ttattattca cttaatccac tataagatta
      481 agcacattcc ccgtctgata ttcaaggagc agaaagatga aaaaattatt ggcagccgtg
      541 atgatggcag gtttggcagg cgcggtttcc gcggccggag tccacgtcga ggacggctgg
      601 gcgcgcacca ccgtcgaagg tatgaaaata ggcggcgcgt tcatgaaaat ccacaacgac
      661 gaagccaaac aagacttttt gctcggcgga agcagccccg ttgccgaccg cgtcgaagtg
      721 catacccaca tcaacgacaa cggcgtgatg cggatgcgcg aagtcaaagg cggcgtgcct
      781 ttggaggcga aatccgttac cgaactcaag cccggcagct atcacgtgat gtttatgggt
      841 ttgaaaaaac aattaaaaga gggcgacaag attcccgtta ccctgaaatt taaaaacgcc
      901 aaagcgcaaa ccgtccaact ggaagtcaaa accgcgccga tgccggcaat gaaccacggt
      961 catcaccacg gcgaagcgca tcagcactaa tctgctgaaa atatttgaaa tgccgtctga
     1021 aaaagcccgg gctttcagac ggcattttta tgactgcctt taaaatgtgt taaaatccgc
     1081 ctttaaaaac cgccgtttcc aaccatattc tacgcatgaa tacgacagca aacccttcca
     1141 atatcatcgt cgggctctcc ggcggtgtcg attcttccgt aaccgccgcc ctgctcaagc
     1201 agcagggtta tcaagtgcgc ggtgtgttca tgcagaactg ggaagacgac gacaacgacg
     1261 aatattgcag catcaaacag gattcgtttg atgccatcgc cgttgccgat attgtcggca
     1321 tcgacatcga catcgttaat ttcgccgcgc aatataaaga caaagtcttt gcttattttc
     1381 ttcaggaata cagtgcgggg cgcacgccga atcccgatgt gttgtgcaac gccgaaatca
     1441 aattcaaatg ctttttggat tacgccgtag ggcagggcgc ggataccatc gccaccggac
     1501 actatgcgcg caaagaagtc cgcaacggcg tgcattacct gctcaaaggt ttggatcgaa
     1561 acaaagacca aagctatttc ctctaccgcc tcaagccttt ccaactcgag cgcgcgattt
     1621 ttccgttggg cggtttggaa aaacccgaag tccgccgcct tgccgccgag ttcaaactgc
     1681 cgactgccgc caaaaaagac agcacgggca tctgcttcat cggcgaacgc ccgtttcgcg
     1741 agtttctgca aaaatacctg ccgaccgaca acggtaaaat ggttacgccc gaagggaaaa
     1801 ccgtcggcga acacgtcggg ctgatgttct acacgctcgg acagcgcaaa ggtttgggca
     1861 ttggcggcgc gggcgaaccg tggtttgttg cggctaaaga tttgacgaaa aacgaactga
     1921 ttgtcgtgca aggacacgac catccgctgc tctatacccg cagccttgtg atgaacgatt
     1981 tgagtttcac gcttcccgaa cgcccgaagg caggacgcta tacctgcaaa acgcgttacc
     2041 gtatggcgga cgcgccttgt gagttgcgct atttggatga agaaaccgcc gagctggtgt
     2101 ttgacgaacc gcaatgggcg gttacgccgg gccagtctgc cgtgctgtat gagggcgatg
     2161 tctgcttggg cggtggcatt atccaatcaa ccgacaaacc cgtcatcatc acgcgataaa
     2221 ggtaatgccg tctgaaacgg ttttcagacg gcattgttcc gctcaattcc actttaaaga
     2281 ccgataccta tgaaaaaaat ctggttagac agctacgaga agggcgtcag tgccgaaatc
     2341 gacatcacgc aatacaattc cgtcagcgac gtattccgcc aaagcgtgga aaaatttgcc
     2401 gaccaacctg cttttcaaaa catgggtaag acgctgactt atgccgaaac cggcaaactg
     2461 gcaacagatt ttgcttctta tctgcaaaac gtccttaaat tgcctcgagg agagcgcgtg
     2521 gcaataatgt tgcccaatgt actgcaatat ccggttgccc ttttcggcat tttgcaggca
     2581 ggtttggtag cggtgaacac caatccgctc tataccccgc gcgagctgga gcatcagttg
     2641 aaagacagcg gcgcgaccgc catcatcgtt ttggaaaatt tcgccaacac gctggagctg
     2701 gtgctgccgc gcacgcagat caaacacgtc atcgtcgcct ctgtcggcga aatgttcggg
     2761 ctgcttaaag gttcgctgat caatttcatc atccggaaaa tcaagaaaat ggtgcccgaa
     2821 taccgtattc gggaaaccat ttcctttcag acggcattga aagaaggggc gaagcacgtt
     2881 ttccaacctg tcgcattaaa ccgcgaagat accgcgctgt tgcaatacac gggcggcacg
     2941 acaggtgttg ccaaaggggc ggtgctgagt cacggcaaca tctgcgccaa tatgcttcag
     3001 gcaaaagaat ggattaaaaa ccagttgcgc gagggcaaag aaaccgttat cgccgccctg
     3061 ccgctgtatc atatttttgc cttaaccgtg aatctgatga tttttgccaa tgccggctcg
     3121 aaaatcatcc tgattaccaa cccgcgcgat atgaaaggct ttatcggaga actgaaaaaa
     3181 cagcgggtta atgtatttat cggcgtgaac acgctgttta acgcgatggt taaccgtcct
     3241 gattttgccg aagtcgattt ttcaggattg cggctgactt tgggcggcgg tatggcgacc
     3301 caaaaagccg ttgccgaaaa atggaaaaaa atcaccggca cgcccatcgt cgaagcctac
     3361 ggtctgaccg aagccagccc cggcgtgtgc tgcaacccct taaacatcga atcatacagc
     3421 ggcagcatcg gtttgcccgt ctcgtccacc gaagtcgaac tgcgcgacgc aaacggcaaa
     3481 gaagtccccg tcgggcagcc gggcgaattg tgggtaaaag gccctcaagt gatgcaaggc
     3541 tactggaacc gccccgaaga aaccgccaaa gccatagacg cgcgcggctt cttggaaacc
     3601 ggcgatattg ccgtcatgga cgaaaaaggc tggttgaagc tggtcgatcg taagaaagac
     3661 ctcgtcgttg tttccggatt caatgtttat ccgaacgaaa tcgaggaagt catcgcgcat
     3721 cacggcaaag tcatggaagt cgcctgtatc ggcgttcccg acgaaaaaac cggcgaggca
     3781 ctcaaagtat tcgtcgtcaa aaaagacccg tcattgacca aagaagaact tatcgccttt
     3841 tgccgcaccg aattaaccgc atataaagta ccgaaaaata tcgaattccg cgacgagttg
     3901 cccaagtcca acgtcggcaa aatcctgcgc cgcgagttgc ggcaaagtac cgggaaataa
     3961 agaaaagatg ccgtctgaaa acagccgtcc accgttcaga cggcatccgt ccgtttgcca
     4021 gaaccgcgcg cttcacgtta aaatcacgca ttccaacatg ggtattccat catgaccaaa
     4081 ttcattttcg taaccggcgg cgttgtctcc tcactgggta aaggtatcgc cgccgcttct
     4141 attgccgcca tcctcgaatc gcgcggcttg aacgttacca tgctcaagct cgatccttat
     4201 atcaacgtcg atcccggcac gatgagcccg tttcaacacg gcgaagtgtt cgtaaccgac
     4261 gacggcgcgg aaaccgacct cgacttggga cactacgaac gtttcatcga ttccacgatg
     4321 acccgccgca acagcttcag cacggggcag gtgtacgaaa acgtcatcgc caaagaacga
     4381 cggggcgact acctcggcgg tacggttcaa gtcatcccgc acattaccga cgaaatcaaa
     4441 cgccgcatcc acgaaggcgc ggcaggttac gatgtggcga ttgtcgaaat cggcggtaca
     4501 gtcggcgata tcgaatcttt gccattcttg gaagccatcc gccaaatgcg cagccagctc
     4561 ggccgcaaca atacattgtt tgcccacctg agctatgttc cttacatcgc cgctgcaggc
     4621 gaaatcaaaa ccaagccgac ccagcacacc gttaaagaaa tgttgagcat cggtttgcaa
     4681 cccgacatcc tgatttgccg tatggacagg acaatgcctg cggacgaacg ccgcaaaatc
     4741 gccttgttct gcaacgtgga agaacgcgcg attgtcggca gctacgatgt ggacagcatc
     4801 tacgaatgcc ccgaaatgct gcacgaccaa ggcatcgata acatcattac cgagcagttg
     4861 cagcttaatg tgcagcaggc ggatttgacc gcgtggaaaa aaatcgtcca cgccatccaa
     4921 aacccgaaac acaccgtcaa aatcgccatg gtcggcaaat acgtcgattt gaccgagtcc
     4981 tacaaatcgc tgatcgaagc cttgaaacac gcaggcattc acaccgaaac cgacgtacaa
     5041 attacctttg ttgacagcga aagcatcgag aaaaacaacg gcgacgtttc tatgctcaaa
     5101 gatatggacg ccatcctcgt tcccggcggt ttcggttcgc gcggcgtgga aggcaaaatc
     5161 gccgctgtgc gctatgcccg cgaaaacaac gtgccatact tgggcatctg cctcggtatg
     5221 cagattgcgc tgatcgaata cgcccgcgac gtggcaggtt tgaaaggtgc gaattccacc
     5281 gagttcgacc tcaaatgcgc cgcccccgtc gttgccctga ttgacgaatg gcaaactgcc
     5341 gacggcagcg tcgaaacccg cgacgaatcc gccgatttgg gcggcaccat gcgtttgggc
     5401 gcgcaagaag tcgaattgaa agcaggcagc ctcgccgcca aaatctacgg cagcgaacac
     5461 atccgcgaac gccaccgcca ccgctacgaa gtcaacaaca actacgttcc tacgctggaa
     5521 caggcaggtt tggtcatcgg cggcgtatcc gccggacgcg aacgcttggt cgaaaccatc
     5581 gaactgccga accatccttg gttcttcgcc tgccagttcc accccgagtt tacctccaat
     5641 ccgcgcaaag ggcatccttt gttcaccgcg tttgtcaaag ctgcgttgaa caataaaaaa
     5701 gcctgataaa gcgttacttg atgatcaaaa tgccgtctga aagcctgaat gaagactttc
     5761 agacggcatt tttgcaaatc ggggatcata aaagccatca atttaatttt tatggtttta
     5821 tctaatattg accaactgaa tattgttaag cggggcgtga aactcaagtt gagacctttg
     5881 caaaatcccc caaaatcccc taaattccca ccaagacatt taggagattt ctcatgagca
     5941 ccttctttca gcaaaccgca caagccatga ttgccaaaca catcgaccgc ttcccgctat
     6001 tgaagttgga ccaggtgatt gattggcagc cgatcgaaca atacctgaac cgtcaaagaa
     6061 cccgttacct cagagaccac cgcggccgtc ctgcctaccc gctgttgtcc atgttcaaag
     6121 ccgtcctgct cggacaatgg cacagcctct ccgttcccga actcgaacac agcctcatca
     6181 cccgcatcga cttcaacctg ttttgccgtt tcgacgaact gagcatccct gattaca
//
LOCUS       DAWITQ010000120         6077 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.120, whole genome shotgun sequence.
ACCESSION   DAWITQ010000120 DAWITQ010000000
VERSION     DAWITQ010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6077)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6077)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6077
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.120"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(57..1460)
                     /gene="mtrE"
                     /locus_tag="WIX18_001648"
     CDS             complement(57..1460)
                     /gene="mtrE"
                     /locus_tag="WIX18_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit MtrE"
                     /protein_id="HEZ5238728.1"
                     /translation="MDTTLKTTLTSVAAAFALSACTMIPQYEQPKVEVAETFKNDTAD
                     SGIRAVDLGWHDYFADPRLQKLIDIALERNTSLRTAVLNSEIYRKQYMIERNNLLPTL
                     AANANDSRQGSLSGGNVSSSYKVGLGAASYELDLFGRVRSSSEAALQGYFASTANRDA
                     AHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREETYKLSELRYKAGVISAVALRQQE
                     ALIESAKADYAHAARSREQARNALATLINQPIPDDLPAGLPLDKQFFVEKLPAGLSSE
                     VLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTGTVGTGSAELGGLFKSGTGVWS
                     FAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESAVQSAFQDVANALAAREQLDKAY
                     DALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSSYAAEGAALSAQLTRAENLAD
                     LYKALGGGLKRDTQTDK"
     gene            complement(1515..4718)
                     /gene="mtrD"
                     /locus_tag="WIX18_001649"
     CDS             complement(1515..4718)
                     /gene="mtrD"
                     /locus_tag="WIX18_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MtrD"
                     /protein_id="HEZ5238729.1"
                     /translation="MAKFFIDRPIFAWVISIFIIAAGIFGIKSLPVSQYPSVAAPTIT
                     LHATYPGASAQVMEDSVLSVIERNMNGVEGLDYMSTSADSSGSGSVSLTFTPDTDENL
                     AQVEVQNKLSEVLSTLPATVQQYGVTVSKARSNFLMIVMLSSDVQSTEEMNDYAQRNI
                     VPELQRIEGVGQVRLFGAQRAMRIWVDPKKLQNYNLSFADIGSALSAQNVQISAGSIG
                     SLPAVRGQTVTATVTAQGQLGTAEEFGNVILRANTDGSNVYLKDVARVGLGMEDYSSS
                     TRLNGVNTTGMAVMLSNSGNAMATAKAVKERMATLEKYFPQGMSWKTPYDTSKFVEIS
                     IEKVIHTLIEAMVLVFVVMYLFLQNIRYTLIPTIVVPISLLGGFAFISYMGMSINVLT
                     MFAMVLVIGIVVDDAIVVVENVERIMAGEGLPPKEATKKAMGQISGAVIGITAVLISV
                     FVPLAMFSGATGNIYKQFALTMASSIAFSAFLALTLTPALCATMLKTIPKGHHEEKKG
                     FFGWFNKKFNSWTHGYEGRVAKVLRKTFRMMVVYIGLAVVGVFLFMRLPTSFLPTEDQ
                     GFVMVSVQLPAGATQERTNATLAQVTQLAKSIPEIENIITVSGFSFSGSGQNMAMGFA
                     ILKDWNERTAPGSDAVAIAGKLTGMMMGTLKDGFGIAVVPPPILELGNGSGLSINLQD
                     RNNTGHTALLAKRNELIQKMRASGLFDPSTVRAGGLEDSPQLKIDINRAAAAAQGISF
                     ADIRTALASALSSSYVSDFPNQGRLQRVMVQADEDARMQPADILNLTVPNKSGVAVPL
                     STIATVSWENGTEQSVRFNGYPSMKLSASPATGVSTGQAMAAVQKMVDELGGGYSLEW
                     GGQSREEAKGGSQTLILYGLAVAAVFLVLAALYESWSIPLAVILVIPLGLIGAAAGVT
                     GRNLFEGLLGSVPSFANDIYFQVGFVTVMGLSAKNAILIIEFAKDLQAQGKSAVEAAL
                     EAARLRFRPIIMTSFAFILGVVPLYIAGGASSASQRAIGTTVFWGMLIGTLLSVFLVP
                     LFYVVVRKFFKETAHEHEMAVKHAAEAGITGSDDSQH"
     gene            complement(4730..5968)
                     /gene="mtrC"
                     /locus_tag="WIX18_001650"
     CDS             complement(4730..5968)
                     /gene="mtrC"
                     /locus_tag="WIX18_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit MtrC"
                     /protein_id="HEZ5238730.1"
                     /translation="MAFYAFKAMRAAALAAAVALVLSSCGKGGDAAQGGQPAGREAPA
                     PVVGVVTVHPQTVALTVELPGRLESLRTADVRAQVGGIIQKRLFQEGSYVRAGQPLYQ
                     IDSSTYEAGLESARAQLATAQATLAKADADLARYKPLVAAEAVSRQEYDAAVTAKRSA
                     EAGVKAAQAAIKSAGINLNRSRITAPISGFIGQSKVSEGTLLNAGDTTVLATIRQTNP
                     MYVNVTQSASEVMKLRRQIAEGKLLAADGVIAVGIKFDDGTVYPEKGRLLFADPTVNE
                     STGQITLRAAVPNDQNILMPGLYVRVLMDQVAVDNAFVVPQQAVTRGAKDTVMIVNAQ
                     GGMEPREVTVAQQQGTNWIVTSGLKDGDKVVVEGISIAGITGAKKVTPKEWASSENQA
                     AAPQSGVQTASEAKTASEAE"
BASE COUNT         1368 a         1721 c         1633 g         1355 t
ORIGIN      
        1 aaagaaatgc cgtctgaaac cttatcgttt cagacggcat tttattgccc gaccggttat
       61 ttgtcggttt gggtatcccg tttcaatccg ccgccgagtg ccttgtacaa atcggcaagg
      121 ttttcggcgc gggtcagttg tgccgacaaa gccgcaccct ccgccgcata gctgctgcgt
      181 tccgcatcga gcaagtcgag cgcgccggat acgccgtgct tgtaacgcag gccgaccaag
      241 cgcaacgctt ctttagaggc gcggctttgt ttgcttaaag cgtcataggc tttatccagc
      301 tgctcgcgcg ccgccaatgc gtttgccacg tcttgaaatg cggattggac ggcggattca
      361 taggcaacga tttgtgcctg ttggcgcagc ttggctacat caaggttcgc cttgttcgta
      421 ccccaggtaa aaatcggcag ggtaatagac ggcgcgaacg accaaacgcc cgtgccgctt
      481 ttgaacaacc cacccaattc ggcagaaccc gtaccgacgg ttccggtcag gcggatggat
      541 gggaaaaagg cggcgcgtgc cgcaccgata ttggcgtttg cctgtttgag cgcgtgttcg
      601 gcggcgcgta tgtcgggacg gtcgagcaat acttcggaac tcaaaccggc cggcagtttt
      661 tcaacaaaaa actgcttgtc caacggcaaa ccggcgggca ggtcgtcggg tatcggttgg
      721 ttaatcaagg ttgccaaggc attgcgcgcc tgttcgcggc tgcgcgcggc atgggcataa
      781 tcggctttgg cagattcgat tagggcttcc tgctgacgta gggcgacggc ggaaatcacg
      841 cctgccttgt aacgtaattc ggacagcttg taggtttcct cgcgcgtttt caaaacacgt
      901 tgcgccaaag acatcgcttc ttcggcgtaa cgttcgttga aataggcttt ggcaacggtg
      961 gcaatcaggc tcaaatgtgc cgcatcgcgg ttggcggtgc tggcgaaata gccttgcagt
     1021 gccgcctcgc tgctgctgcg tacacgcccg aacagatcga gttcgtaaga tgccgcaccc
     1081 agtccgactt tgtagctgct gcttacattg ccgccgctca agctgccttg gcgcgagtcg
     1141 ttcgcattgg cggcaagcgt gggcaggagg ttgttgcgct caatcatgta ttgtttgcgg
     1201 tagatttcgc tgttcaatac ggcggtacgc aaactggtat tgcgctcgag tgcgatgtcg
     1261 atcagctttt gcaggcgcgg gtcggcaaaa tagtcgtgcc aacccaaatc gacggcgcgg
     1321 atgccgctgt cggcggtatc gtttttgaac gtttcggcaa cttcgacttt gggctgctcg
     1381 tattggggaa tcatggtgca ggcggataat gcgaaggctg ctgcaacaga agtcaaggtg
     1441 gttttcaatg tagtatccat aaaaaagtcc tgatgccgtc tgaaaacccg tgggcgttca
     1501 gacggcatgg ttgcttaatg ttggctgtcg tccgaaccgg tgatgcccgc ttcggcggcg
     1561 tgttttactg ccatttcgtg ttcgtgcgcg gtttctttga agaatttgcg caccaccaca
     1621 tagaaaagcg gaacaaggaa caccgacaag agcgtgccga tgagcatccc ccagaatacg
     1681 gttgtaccaa tggcgcgctg gctggcagaa cttgcaccgc cggcaatata caggggaacc
     1741 acgcccaaaa taaaggcaaa cgaggtcatg ataatcggac ggaaacgcag gcgggctgct
     1801 tccaaagcgg cttcaaccgc gcttttccct tgcgcttgaa ggtctttggc aaactcgata
     1861 atcaaaatcg cgtttttcgc actcaaaccc atcacggtaa cgaaaccgac ttgaaagtag
     1921 atgtcgttgg cgaacgaggg aacgctgccc aacagtcctt caaacaggtt gcgcccggtt
     1981 acgcccgcag ccgcaccgat caaacccaac ggaatcacaa ggatgaccgc cagcggaatc
     2041 gaccagcttt cataaagcgc ggcaagtacc aaaaatacgg ctgcaaccgc caaaccgtac
     2101 aaaatcaggg tttgcgagcc gccttttgcc tcttcgcgcg actgtccgcc ccactccagg
     2161 ctgtaaccgc cgcccaattc gtcaaccatt ttttgaaccg ccgccatagc ctgcccggtg
     2221 gaaacgccgg ttgcaggcga agcggacagc ttcatcgaag gataaccgtt gaagcgtacg
     2281 ctctgttccg taccgttttc ccaagaaaca gtagcaatgg tggaaagcgg tacggcgacg
     2341 ccggatttgt tcggcacggt caggttcaaa atatcggcag gctgcatacg ggcatcctcg
     2401 tcggcctgca ccatcacgcg ttgcagacgg ccttggttcg ggaagtcgct gacataagac
     2461 gaactcagcg cacttgccaa tgcggtgcgg atgtcggcaa acgaaatgcc ttgcgccgcc
     2521 gcggcggcac ggttgatgtc gattttcaac tgcggcgagt cttccaaacc gccggcacgg
     2581 acggtgctgg ggtcaaacaa accgctggca cgcattttct gaatcaactc gttgcgcttc
     2641 gccagcaatg cggtatggcc ggtattgttg cggtcttgca ggttgatgct cagacccgaa
     2701 ccgttgccca actccagaat cggaggcggg acgacggcga tgccaaaacc gtctttaagc
     2761 gtccccatca tcatacccgt cagcttgccg gcaatcgcaa cggcatcgct gccgggcgcg
     2821 gtacgctcgt tccaatcttt caatatggca aaacccatcg ccatattctg accgctgccc
     2881 gaaaagctga agccggaaac ggtaatgatg ttttctattt caggaatgct tttcgccagt
     2941 tgggtaactt gcgccaaagt cgcattggtg cgctcttggg tcgctcctgc aggcagttgc
     3001 acgctgacca tgacgaagcc ttggtcttcg gtcggcagga acgaagtcgg caggcgcata
     3061 aacaggaaca cgcccacaac cgccaagccg atatagacaa ccatcatgcg gaaagtctta
     3121 cgcagcactt tggcaacccg gccttcgtaa ccgtgcgtcc aactgttgaa tttcttgtta
     3181 aaccagccga agaaaccttt tttctcttcg tgatgccctt tcgggattgt cttcaacatt
     3241 gtggcacaca aagcaggggt aagggtcagc gcaaggaagg cggagaatgc gattgatgac
     3301 gccatcgtca gggcaaactg tttgtaaata ttgcccgtcg ccccgctgaa catcgccaac
     3361 ggtacgaaca cggaaatcag aacggcggta ataccgatga ccgcgcccga aatctgaccc
     3421 atcgcttttt tggtcgcttc tttgggcggc aagccttcac ccgccataat gcgctcgacg
     3481 ttttcaacca ccacaatcgc gtcatcgacc acgatgccga tgaccaaaac catcgcaaac
     3541 atggtcagta cgttaatcga catgcccata taagagatga aagcgaaacc gcccaacagc
     3601 gaaatcggta cgacgatggt cggaatcagc gtataacgga tgttttgcag gaagagatac
     3661 attacgacaa acaccagcac catcgcttcg attaaagtat gaatcacttt ttcaatcgaa
     3721 atttcgacga atttggaagt atcgtaaggg gttttccagc tcataccctg aggaaagtat
     3781 ttttccaacg tcgccatgcg ttctttaacc gcctttgccg tcgccatcgc attgccgctg
     3841 ttggacagca tcaccgccat accggtggta tttacaccgt tcagacgggt tgaggaagaa
     3901 tagtcttcca tacccagtcc gacccttgcc acatccttca ggtaaacatt agaaccgtcg
     3961 gtattggcgc ggaggatgac gttgccgaat tcttctgccg tacccaactg cccttgcgcc
     4021 gttacggtag ccgtaaccgt ctgtccgcga acggcgggaa gcgaaccgat agaacccgct
     4081 gaaatctgga cgttctgggc ggacagcgca ctgccgatat cggcaaacga caaattgtag
     4141 ttttgcagtt tcttaggatc aacccaaatc cgcatcgcgc gttgcgcgcc gaacaggcgt
     4201 acctgcccca cgccttcgat acgctgcagt tcgggaacga tattacgctg cgcgtagtcg
     4261 ttcatctctt cggttgactg cacatccgac gaaagcatca caatcatcag gaaattggaa
     4321 cgcgccttgg atacggttac gccgtattgc tggacggttg ccggcagcgt gctcaatact
     4381 tcggaaagct tgttctgcac ttccacctgc gccagattct cgtcggtatc gggcgtaaag
     4441 gtcaggctca cgctgccgct gccgctcgaa tcggcggaag tggacatata atccaaacct
     4501 tccacgccgt tcatattccg ctcgatcacg gaaagcacgc tgtcttccat tacctgcgcg
     4561 gacgcacccg gataagtggc gtgcaaagta atggtcgggg cggcgacaga cggatattgc
     4621 gaaacaggca ggcttttgat gccgaaaata cccgccgcaa taatgaaaat cgaaataacc
     4681 cacgcaaaaa tagggcggtc gataaaaaat ttagccatcg atgccttcct tattccgctt
     4741 cagaagcagt tttggcttca gatgccgtct gaacgccgga ttgaggcgcg gcggcttggt
     4801 tttcagacga cgcccattct ttgggcgtta cctttttcgc acccgttata ccggcgatac
     4861 tgatgccttc cacaaccacc ttgtccccgt ccttcagacc cgacgtaaca atccaattcg
     4921 taccctgctg ttgcgcaacc gttacctcgc ggggttccat accgccttgg gcattcacaa
     4981 tcatcacggt atctttcgca ccgcgcgtta ccgcctgctg cggcacaaca aatgcgttat
     5041 ccaccgccac ttggtccatc agcacgcgca catacaggcc gggcatcagg atattctgat
     5101 cgttcggtac ggcggcgcgc agggtaatct gaccggtcga ttcgttgacg gtcggatcgg
     5161 caaacagcag gcggcctttt tcagggtaaa ctgtaccgtc gtcaaatttg atgccgaccg
     5221 caatcacacc atccgccgcc agcagtttgc cttcggctat ctgacggcgc aatttcatca
     5281 cttcggatgc agactgggta acgttcacat acatcggatt ggtttggcgg atggttgcca
     5341 gcacggtcgt atcgcccgca ttcaacagcg taccttcgga aactttggac tgaccgataa
     5401 agccggaaat cggcgcggta atgcgcgaac ggttcagatt aatgccggca gatttgattg
     5461 ccgcctgtgc tgctttgaca cctgcctcgg cagaacgttt cgccgttacc gcagcatcgt
     5521 attcctgccg gctgacggct tcggcggcaa ccaaaggctt gtatcgcgcc aaatccgcat
     5581 ccgctttggc aagcgttgcc tgagccgttg ccagttgcgc gcgcgcactt tccagacctg
     5641 cttcataagt ggaactgtcg atctgataca gcggctgtcc ggcacggaca taactgcctt
     5701 cttggaacag gcgtttttgg atgatgccgc cgacttgggc gcggacatcg gcggtacgca
     5761 gcgattccaa acgccccggc aactcgacgg tcaatgcgac ggtttgcgga tggacggtta
     5821 cgacaccgac gacgggcgca ggggcttccc gaccagcagg ctgcccgccc tgcgccgcgt
     5881 ctccgccttt accgcaagac gacagtacca atgcaacggc ggcagccaac gcggccgcac
     5941 gcatcgcctt aaaagcataa aaagccatta tttatcctat ctgtctggtt tgatgtaaag
     6001 ggttttgcca atcaacaggc attcttatag tggattaaca aaaaccagta cggcgttgcc
     6061 tcgccttagc tcaaaga
//
LOCUS       DAWITQ010000121         5994 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.121, whole genome shotgun sequence.
ACCESSION   DAWITQ010000121 DAWITQ010000000
VERSION     DAWITQ010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5994)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5994)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5994
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.121"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            165..1277
                     /gene="nadA"
                     /locus_tag="WIX18_001651"
     CDS             165..1277
                     /gene="nadA"
                     /locus_tag="WIX18_001651"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HEZ5238731.1"
                     /translation="MQTAARRSFDYDMPLIQTPTSACQIRQAWAKVADTPDRETADRL
                     KDEIKALLKEKNAVLVAHYYVDPLIQDLALETGGCVGDSLEMARFGAEHEAGTLVVAG
                     VRFMGESAKILCPEKTVLMPDLEAECSLDLGCPEEAFSAFCDQHPDRTVVVYANTSAA
                     VKARADWVVTSSVALEIVSYLKSRGEKLIWGPDRHLGDYIRRETGADMLLWQGSCIVH
                     NEFKGQELAALKAEHPDAVVLVHPESPQSVIELGDVVGSTSKLLKAAVSRPEKKFIVA
                     TDLGILHEMQKQAPDKEFIAAPTAGNGGSCKSCAFCPWMAMNSLGGIKYALTSGRNEI
                     LLDRKLGEAAKLPLQRMLDFAAGLKRGDVFNGMGPA"
     gene            1329..2837
                     /gene="nadB"
                     /locus_tag="WIX18_001652"
     CDS             1329..2837
                     /gene="nadB"
                     /locus_tag="WIX18_001652"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HEZ5238732.1"
                     /translation="MQTDCDVLIAGNGLAALTLALSLPESFRIVILCKNRLDDTASRH
                     AQGGIAAAWSGEDDIEKHVADTLEASAGLCDEAAVRTILSQGKPAIEWLLAQGVAFDR
                     NHNDLHLTREGGHTCRRIAHVADYTGEAVMQSLLAQIRRRPHIRVCERQMALDIQTES
                     GVACGLIVLDRRTQETYLIRARHTVLAGGGLGQIYAATTTPPECTGDAIAMAIRAGCA
                     VENLEFIQFHPTGLARSSENGRTFLISEAVRGEGGILTNQAGERFMPYYDRRAELAPR
                     DIVARAIAAEIAKQTQDFVSLDISHQPAAFVRRHFPSIHRHCLSQCGLDITRQAIPVR
                     PVQHYTCGGIQTDPCGRTSLPQLYSLGETACTGLHGANRLASNSLLECVVTARLAAQT
                     IADGQAFQAKTSPRPSESLSSEAGIFSDGIQSAFSRPVLQAFNQRHLGILRNDTGLRC
                     AIAQLRLWKQNQTEPHTASEYENRNLLECSLAVAQAAYRRRQNIGAHFNSDC"
     gene            complement(3015..3680)
                     /gene="pgmB"
                     /locus_tag="WIX18_001653"
     CDS             complement(3015..3680)
                     /gene="pgmB"
                     /locus_tag="WIX18_001653"
                     /EC_number="5.4.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase"
                     /protein_id="HEZ5238733.1"
                     /translation="MTFTAVLFDLDGVITDTAEYHYRAWKKLAEELGIGIDRKFNEQL
                     KGVSRDDSLKRILAHGGKTVGEAEFAELTRRKNDNYVEMIQAVKPEDVYLGILPLLEA
                     LKANGKKIALASASKNGPFLLERMGLTHFFDTVADPAAVAHSKPAPDIFLAAAEGVGA
                     DIRRCIGIEDAAAGVAAIKAAGALPIGVGKAEDLGSDIALVSDTAELTYAYLQNVWAQ
                     SGR"
     gene            complement(3693..5951)
                     /locus_tag="WIX18_001654"
     CDS             complement(3693..5951)
                     /locus_tag="WIX18_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 65 protein"
                     /protein_id="HEZ5238734.1"
                     /translation="MYTRIMEISPWTLRSAKLEKEHKRLQESLTSLGNGYMGMRGSFE
                     ETYSADSHLGTYIAGVWFPDKTRVGWWKNGYPKYFGKAINALNFSKVKIFVDGQEVDL
                     AKNDVAGFSVELDMQHGVLRRSFTVFGVRFDVCKFLSVAQKELAVIRWEAVSVDGKTH
                     QVRIDSIIDADVKNEDSNYEEKFWQVLDKGVSDSLSYIAAQTVANPFGVEQFIVNAEQ
                     TFAGSFKALGGSQTDWQVSNSFESEVGGTPKTFEKRVIVTTSRDYQGLEAVKAAGRAL
                     SEKVAGVAFETLLDAHKAGWLHRWEIADVVIEGSDEAQQGIRFNLFQLFSTYYGEDAR
                     LNIGPKGFTGEKYGGATYWDTEAYAVPLYLALAEPEVTRNLLQYRRNQLPQAQHNARE
                     QGLAGALYPMVTFTGIECHNEWEITFEEIHRNGAIPYAIYNYTNYTGDESYLAKEGLE
                     VLVEVSRFWADRVHFSKRSGKYMIHGVTGPNEYENNINNNWYTNTLAAWVLDYTREAL
                     AKYPRPDLNVSAAELEKWADISANMYRPHDEELGVFVQHDGFLDKDIRPVSALSPDDL
                     PLNQKWSWDKILRSPFIKQADVLQGIYFFGDRFNIDEKRRNFDFYEPMTVHESSLSPC
                     IHSILAAELGKEEKAVEMYRRTARLDLDNYNNDTEDGLHITSMTGSWLAIVQGFAQMK
                     TWGGKLSFAPFLPSAWTGYTFHINYRGRLIKVAVGKENVVFTLLKGEPLDLQVYGKDI
                     TLNGSHTAALEK"
BASE COUNT         1241 a         1672 c         1747 g         1334 t
ORIGIN      
        1 ccaaagcggt ttgtcggaac gaagcgggtc ggttttacgg tatcgcaaac ctgttttcag
       61 acgaccttgc ttattatact caatttgagc ataatataaa aatatttcaa aatataaacg
      121 gcaaatcttt atgccgtctg aaaaaccagc cataaggaag tctcatgcaa accgccgccc
      181 gccgctcgtt cgactacgat atgccactca tccaaacgcc gacttccgcc tgccaaatcc
      241 gtcaggcgtg ggcgaaggtt gccgacacgc ccgaccgcga gacggcagat cgtctgaaag
      301 acgaaatcaa ggctttgctg aaggagaaaa acgcggtctt ggtggcgcat tattatgttg
      361 atccgctgat tcaggatttg gctttggaaa cgggcggatg cgtgggcgat tctctggaaa
      421 tggcacgctt cggcgcggaa cacgaagccg gtacgctggt ggtggcgggc gtgcgtttca
      481 tgggagagag cgcgaaaatc ctctgccctg aaaaaacggt gctgatgcct gatttggaag
      541 cggaatgttc tttggatttg ggttgcccgg aagaggcgtt ttcggcgttt tgcgaccaac
      601 accccgaccg cacggtggtg gtgtacgcca acacttccgc cgccgtgaaa gcgcgtgccg
      661 attgggtggt aacgtcttcg gtggcgttgg aaatcgtgtc gtatctgaaa tcgcgcggcg
      721 agaagctgat ttgggggccc gaccgccacc tcggcgacta catccgccgc gaaacgggcg
      781 cggatatgct gttgtggcag ggttcgtgca tcgtccacaa cgaatttaaa gggcaggagc
      841 tggcggcgtt gaaggcggaa caccccgatg cggtggtgct ggttcatccc gaatcgccac
      901 aaagcgtcat cgaactgggc gacgtggtcg gctcgaccag caaactgctg aaagctgccg
      961 tatcacgccc cgaaaaaaaa ttcatcgtgg cgaccgattt gggcatcctg cacgaaatgc
     1021 aaaagcaggc gcccgacaaa gaatttatcg ccgcgccgac ggcgggcaac ggcggaagtt
     1081 gcaaaagctg cgcgttctgc ccgtggatgg cgatgaattc gctgggcggc atcaaatacg
     1141 ccctgacaag cggacgtaac gaaatcctgt tggacaggaa gctgggcgaa gccgccaaac
     1201 tgcctttgca gcgtatgctc gacttcgcgg caggactcaa acgcggggat gtgttcaacg
     1261 gcatggggcc cgcctgattt gccgtccata ttgccgtttc agacgacctc tccaacaagg
     1321 acaacaccat gcaaaccgat tgcgacgtat tgattgccgg aaacgggctg gcggcactga
     1381 cgctcgccct gtcgctgcct gaatcgttcc gcatcgtcat tttgtgcaaa aaccggctgg
     1441 acgacaccgc cagccgtcat gcgcaaggcg ggattgcggc ggcgtggtcg ggagaggacg
     1501 acatcgaaaa acacgtcgcc gatactttgg aagcgagcgc aggtttgtgc gacgaagccg
     1561 ccgtccgcac catcctgtcg cagggcaaac cggcaatcga atggctgttg gcgcagggtg
     1621 tggcgttcga ccggaatcat aacgacctgc acctgacgcg cgaaggcggg catacctgcc
     1681 gccgaatcgc ccacgtcgcc gactacacgg gcgaagccgt catgcagagc ctgcttgccc
     1741 aaatacgccg ccgcccgcac atccgcgttt gcgagcggca gatggcgttg gacattcaaa
     1801 ccgaatcagg tgtggcgtgc ggactgatcg tccttgaccg ccgaacgcaa gaaacctacc
     1861 tcatccgcgc ccgccatacc gtactcgcag gcggcggctt gggacagatt tacgccgcca
     1921 ccaccacgcc gcccgaatgc acgggcgacg ccatcgccat ggcgatacgc gcaggctgcg
     1981 cagtcgaaaa cctcgaattt atccaattcc accccacagg cttggcaaga tcgtctgaaa
     2041 acggccgcac cttcctgatt tccgaagccg tgcgcggcga aggcggcatc ctgaccaacc
     2101 aagcgggcga acggtttatg ccgtattacg accgccgcgc cgaactcgcg ccgcgcgaca
     2161 tcgttgcccg cgccatcgcc gccgaaatcg ccaaacaaac gcaagacttc gtctcactcg
     2221 atatcagcca tcaacccgca gcgttcgtcc gccggcattt cccgtccatc catcggcact
     2281 gtttatccca atgcggcctg gatatcacgc gccaagccat ccccgtccgc cccgtgcaac
     2341 actacacctg cggcggcatc caaaccgacc cctgcggcag aacttccctg ccgcagctct
     2401 actccttagg cgaaaccgcc tgcaccggct tgcacggagc caaccgcctt gccagcaact
     2461 ccctgctcga atgtgtcgtt accgccagac ttgccgccca aaccatcgca gacggacaag
     2521 cattccaagc caaaacgtct ccaaggccgt ctgaaagcct ctcctccgaa gcaggcatct
     2581 tttcagacgg catccaaagc gcattcagcc gccccgtcct gcaagcgttc aaccaacgcc
     2641 atctgggcat cctccgcaac gataccggtc tgcgctgcgc catcgcccag ctgcggcttt
     2701 ggaaacaaaa ccaaaccgaa ccgcacaccg cgtccgaata cgaaaaccgc aacctgctcg
     2761 aatgcagcct cgccgtcgcc caagccgcat acaggcggag acagaacatc ggcgcgcatt
     2821 ttaatagtga ttgttaaggt tggctggtta gaaaaaaaat cgttcaaata aatttgaata
     2881 gcatggttaa gaaattggca tttagttttt agggttgcgt aagttgggtt atcaatctgt
     2941 tctaaaagca gaaaggccgt ctgaaacact gttcagacgg ccttttactt ccttgacact
     3001 ttatctgacg cgttttacct gcccgactgt gcccacacgt tttgcaggta ggcgtaggtc
     3061 agctcggcgg tatcggacac cagcgcgatg tcgctgccca agtcttcggc tttgcccacg
     3121 ccgataggca aggcgccggc ggctttgatg gcggcgacac ctgcggcagc gtcttcaatg
     3181 ccgatgcagc ggcggatgtc cgcgcccacg ccctcggcgg cggcgaggaa gatgtcgggg
     3241 gcgggtttgg aatgcgcgac ggcggcaggg tcggcgacgg tgtcgaagaa gtgggtcagc
     3301 cccatgcgtt cgagcaggaa ggggccgttt ttactggcgg acgcaagggc gatttttttg
     3361 ccgtttgctt ttaatgcttc cagcagcggc aaaatgccga gatacacgtc ttcgggtttg
     3421 actgcctgaa tcatctcgac gtagttgtcg tttttgcggc gggtcagttc ggcgaactcg
     3481 gcttcgccga cggttttgcc gccgtgtgcg aggatgcgtt tgagcgaatc gtcgcgcgac
     3541 acgcctttga gctgctcgtt aaacttgcgg tctatgccga tgcccagttc ttcggcgagc
     3601 tttttccatg cgcggtagtg gtattcggcg gtgtcggtga tgacgccgtc gagatcgaag
     3661 agcactgcgg taaacgtcat tttgcgccct ccttattttt ccaacgcggc ggtatggctg
     3721 ccgttgagtg tgatgtcttt gccgtacacc tgcaaatcga gcggctcgcc tttgagcagg
     3781 gtgaagacga cgttttcttt gccgacggcg actttaatca gacggcctcg gtagttgata
     3841 tggaaggtgt agcctgtcca cgcgctcggc aggaacggtg cgaagctgag tttaccgccc
     3901 caagttttca tttgggcgaa accttggacg atggcgagcc acgagccggt catagaagta
     3961 atgtgcaggc cgtcttcggt gtcgttgttg tagttgtcca agtccaggcg tgcggtgcgc
     4021 cggtacattt ccacggcttt ttcttctttg cccagttcgg cggcgagaat agagtggata
     4081 cacggcgaca acgagctttc atgcacggtc atcggttcgt agaagtcgaa gttgcggcgt
     4141 ttttcgtcga tattgaaacg gtcgccgaag aaatagatgc cttgcaatac gtccgcctgt
     4201 ttgataaagg gcgaacgcag gattttgtcc cacgaccatt tctggttgag cggcaaatcg
     4261 tcgggcgaaa gcgcggacac ggggcggatg tctttgtcga ggaagccgtc gtgttgcacg
     4321 aatacgccga gttcttcgtc atgaggacgg tacatattcg cgctgatgtc cgcccatttt
     4381 tccaactcgg cggcgctcac gttcaaatcc ggacgcgggt atttcgccag ggcttcgcgg
     4441 gtgtagtcca atacccatgc ggcgagggtg ttggtgtacc agttgttgtt gatgttgttt
     4501 tcgtattcgt tcgggccggt tacgccgtga atcatgtatt tgccgctgcg tttggagaag
     4561 tggacgcggt ccgcccagaa gcgggacact tcgaccaaga cttccaagcc ttctttggca
     4621 agatagcttt cgtcgccggt gtagttggtg tagttgtaga tggcgtaagg aatcgcgcca
     4681 ttgcggtgga tttcctcgaa ggtgatttcc cattcgttgt ggcactcgat gccggtaaac
     4741 gttaccatcg gatagagtgc gcccgccaag ccctgttcgc gcgcgttgtg ctgcgcctgc
     4801 ggcagttggt tgcggcggta ttgcagcagg ttgcgggtaa cttcgggttc cgccagtgcg
     4861 aggtagagcg gtacggcata ggcttcggta tcccaatagg tcgcgccgcc gtatttttcg
     4921 ccggtaaagc ctttggggcc gatgttcagg cgcgcgtctt cgccgtagta ggtggagaac
     4981 agttggaaca gattgaaacg gatgccttgc tgcgcttcgt cgctgccttc gatgaccacg
     5041 tcggcgattt cccaacggtg cagccagcct gctttgtgcg cgtccagcaa ggtttcaaac
     5101 gcaacgcctg cgactttttc cgacaaggcg cggcctgcgg ctttcactgc ttccaagccc
     5161 tgataatcgc ggctggtggt aacaatcacg cgtttttcaa aggttttggg cgtgccgccg
     5221 acttcggact cgaaagaatt ggagacctgc cagtcggttt ggctgccgcc gagggctttg
     5281 aagctgccgg cgaaagtttg ctcggcgttg acgataaatt gttccacgcc gaagggattg
     5341 gcgacggttt gggcggcaat gtaggagaga ctgtctgaaa cgcctttgtc caatacctgc
     5401 cagaattttt cttcgtagtt ggagtcttcg tttttcacgt cggcatcgat gatggaatcg
     5461 atgcggactt ggtgggtttt gccgtcaacg gatacggctt cccagcggat gaccgccaac
     5521 tctttttgcg cgacggacag gaatttacac acatcgaaac gcacgccgaa tacggtgaac
     5581 gagcggcgca acacgccgtg ctgcatatcg agttcgacgg agaagccggc aacatcgttt
     5641 ttcgccaagt ccacctcttg tccgtcgaca aagattttga ctttgctgaa attgagcgcg
     5701 ttgatggctt taccgaaata tttggggtag ccgtttttcc accagccgac gcgggttttg
     5761 tcgggaaacc acacaccggc gatgtaggta cccaagtggc tgtcggcgga ataggtttcc
     5821 tcaaagctgc cgcgcatacc catatagccg ttgcccaaac tggtcaggct ctcttgcagc
     5881 cgtttgtgtt ctttttccag ctttgccgaa cgcagcgtcc aagggctgat ttccataatt
     5941 cttgtgtaca tttatgaagc tcctgtttgg attgatttga gggaatggtg aaat
//
LOCUS       DAWITQ010000122         5988 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.122, whole genome shotgun sequence.
ACCESSION   DAWITQ010000122 DAWITQ010000000
VERSION     DAWITQ010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5988)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5988)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5988
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.122"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..79)
                     /locus_tag="WIX18_001655"
     CDS             complement(<1..79)
                     /locus_tag="WIX18_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HEZ5238735.1"
                     /translation="MKPAVWAALLLCACTSNFGDREHQFL"
     gene            282..1610
                     /gene="miaB"
                     /locus_tag="WIX18_001656"
     CDS             282..1610
                     /gene="miaB"
                     /locus_tag="WIX18_001656"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEZ5238736.1"
                     /translation="MKKVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADII
                     LFNTCSVREKAQEKVFSDLGRVRPLKEKNPGLIIGVAGCVASQEGENIIKRAPYVDVV
                     FGPQTLHRLPKMIVDKETSGLSQVDISFPEIEKFDHLPPARVEGGAAFVSIMEGCSKY
                     CSFCVVPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRGEMDDGEICDF
                     ATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSDRVLSA
                     MKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSF
                     VFIYSPRPGTPAANLHDDTPHEEKVRRLEALNEVIEAETARINQTMIGTVQRCLVEGI
                     SKKDPDQLQARTANNRVVNFTGTPDMINQMIDLEITEAYTFSLRGKTVSI"
     gene            complement(1695..3608)
                     /gene="dxs"
                     /locus_tag="WIX18_001657"
     CDS             complement(1695..3608)
                     /gene="dxs"
                     /locus_tag="WIX18_001657"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HEZ5238737.1"
                     /translation="MNPSPLLDLIDSPQDLRRLDKKQLPRLAGELRAFLLESVGQTGG
                     HFASNLGAVELTIALHYVYDTPEDKLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAG
                     FPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGSDRRSVAIIGDGAMTAGQAFEAL
                     NCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDMHGLLSTVKAQTGKVLDKI
                     PGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLR
                     SRKGPQLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQMPSEKEPKPAAKPTYTQ
                     VFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVGIAEQHAVTFAGGLA
                     CEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGPTHAGLYDLSF
                     LRCIPNMIVAAPSDENECRLLLSTCYQADAPAAVRYPRGTGTGAPVSDGMETVEIGKG
                     IIRREGGKTAFIAFGSMVAPALAVAEKLNATVADMRFVKPIDEELIVRLARSHDRIVT
                     LEENAEQGGAGGAVLEVLAKHGICKPVLLLGVADTVTGHGDPKKLLDDLGLSAEAVER
                     RVRAWLSDRDAAN"
     gene            complement(3693..4610)
                     /gene="xerC"
                     /locus_tag="WIX18_001658"
     CDS             complement(3693..4610)
                     /gene="xerC"
                     /locus_tag="WIX18_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HEZ5238738.1"
                     /translation="MVLDGFAAHFDAYLENIVREGKSGHTVAAYRRDLEELFALLAQM
                     PSEDAGGVPQGLSQRDFTAALRRLSQRGLNARTLARKLSSWRQYCAWLVKRGLLHTDP
                     TADIKPPKQPERVPKALPQEWLNRMLDLPVDGGDPLAVRDHALFELMYGSGLRVSEIH
                     GLNADDVYLDEAWVHVTGKGRKQRQVPLVGKSVEALKNYLSLRQTASDGKALFTGRNG
                     TRLSQRQIQKRLAQWAAQNGDGRHVSPHMMRHSYAGHLLQASRDIRAVQELLGHSSLS
                     TTQIYTKLDFDHIARLYDEAHPRAKRQDE"
     gene            4804..5868
                     /locus_tag="WIX18_001659"
     CDS             4804..5868
                     /locus_tag="WIX18_001659"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-bisphosphate aldolase class II"
                     /protein_id="HEZ5238739.1"
                     /translation="MALVSMRQLLDHAAENSYGLPAFNVNNLEQMRAIMEAADQVNAP
                     VIVQASAGARKYAGAPFLRHLILAAVEEFPHIPVVMHQDHGASPDVCQRSIQLGFSSV
                     MMDGSLMEDGKTPSSYEYNVNATRTVVNFSHACGVSVEGEIGVLGNLETGEAGEEDGV
                     GAVGKLSHDQMLTSVEDAVRFVKDTGVDALAIAVGTSHGAYKFTRPPTGDVLRIDRIK
                     EIHQALPNTHIVMHGSSSVPQEWLKVINEYGGNIGETYGVPVEEIVEGIKHGVRKVNI
                     DTDLRLASTGAVRRYLAENPSDFDPRKYLSKTIEAMKQICLDRYLAFGCEGQAGKIKP
                     VSLEKMANRYAKGELNQIVK"
BASE COUNT         1348 a         1824 c         1563 g         1253 t
ORIGIN      
        1 gcaggaactg atgttccctg tcgccaaaat tgctggtaca cgcacacagc agcaatgccg
       61 cccacacagc cggtttcata cacacctccc attaaagcca aacattatac agccgtcctg
      121 accgattaaa ttcatatttt aaaacaatat tctgtttaca aaacccacat cgtgctataa
      181 tccgcaccga ttttcagacg gcatcgtcat gccgtctgaa attttttcat tccaacaaca
      241 atcagccccg cgattacggc tgcctgagaa agacacaaac catgaaaaaa gtatttatcc
      301 gcaccttcgg ctgccagatg aacgaatacg acagcgacaa aatgctcgcc gtcctcgccg
      361 aagaacacgg cggcatcgaa caggttaccc aagccgacga agccgacatc atcttgttca
      421 acacctgctc cgtgcgcgaa aaagcgcaag aaaaagtctt ctccgatttg gggcgcgtgc
      481 gtccgctcaa agaaaaaaac cccggcctca tcatcggcgt tgccggctgc gtcgcctcgc
      541 aagaaggcga aaacatcatc aaacgcgcgc cttatgttga cgtggttttc ggcccgcaaa
      601 cgctgcaccg cctgcccaaa atgattgtgg acaaagaaac cagcgggctg tcgcaagtcg
      661 atatttcctt ccccgaaatc gaaaaattcg accacctgcc gcccgcccgc gtcgaaggcg
      721 gcgcggcatt tgtatcgatt atggaaggct gttccaaata ctgctcattc tgcgtcgtcc
      781 cctacacgcg cggcgaagaa ttctcccgcc cgctcaacga cgtattgaca gaaatcgcca
      841 accttgccca gcaaggcgtt aaagaaatca acctcttagg ccaaaacgtc aatgcctatc
      901 gcggcgaaat ggacgacggc gaaatctgcg acttcgccac cctgctgcgc atcgtccacg
      961 aaatccccgg catcgaacgt atgcgcttca ccaccagcca cccgcgcgag tttaccgact
     1021 cgattatcga gtgctaccgc gacctgccca aattggtttc ccacctgcac ctgccgattc
     1081 aaagcggttc cgaccgcgta ttgagcgcga tgaaacgcgg ctacaccgct ttggaataca
     1141 aatccatcat ccgcaaactg cgtgccatcc gtcctgattt atgcctgagc agcgacttta
     1201 tcgtcggctt ccccggcgag accgaacgcg agttcgagca aaccttgaaa ctggtgaaag
     1261 acattgcctt cgacttgagc ttcgtgttta tttacagtcc gcgccccggc acgcctgccg
     1321 ccaacctgca cgacgacacg ccgcacgaag aaaaagtgcg ccgcctcgaa gccttgaacg
     1381 aagtcatcga agccgaaacc gcgcgcatca accaaacgat gatcggcacg gttcaacgct
     1441 gcctggtcga aggcatctcc aaaaaagacc ccgaccaact gcaagcccgc accgccaaca
     1501 accgcgtcgt caactttacc ggcacgcccg atatgatcaa ccaaatgatc gatttggaaa
     1561 tcaccgaggc ctacaccttc tccctgcgcg gcaaaaccgt cagcatttga tttcccccgc
     1621 cgcaaaaatg ccgtctgaag cgtttcagac ggcattttgc cttgtatcgg cagacgacgg
     1681 cgcggccggg cggcttaatt tgccgcatcc cgatccgaca gccacgcgcg cacacgccgt
     1741 tccaccgctt cggcactcaa gcccaaatcg tctaaaagtt ttttcggatc gccgtgtccg
     1801 gttacggtat cggcaacgcc caaaagcaaa acgggtttgc agatgccgtg tttcgccaat
     1861 acttccagca ccgcgccgcc tgcgccgccc tgttcggcgt tttcttcaag ggtaacgatg
     1921 cggtcgtggc ttcgggcaag gcggacaatc aactcttcgt ctatcggttt gacgaagcgc
     1981 atatcggcga cggtggcgtt cagtttttcg gcaaccgcca atgcgggggc gaccatgctg
     2041 ccaaaggcaa tgaaggcagt tttcccacct tcgcggcgga taatgccctt gccgatttca
     2101 acggtttcca tgccgtctga aaccggcgcg cccgtacccg tgccgcgcgg atagcggacg
     2161 gcggcgggcg cgtctgcctg atagcaggtc gaaagcagca ggcggcattc gttttcatcg
     2221 ctcggcgcgg cgacaatcat attcggaatg cagcgcaaga agctcaaatc gtacaaaccg
     2281 gcgtgggtcg ggccgtccgc gccgacgatg cccgcgcggt cgacggcaaa caaaacgggc
     2341 aggttttgca gggcgatgtc gtgcaccagt tggtcgtagg cgcgttgtaa aaaggtggaa
     2401 taaatcgcca cgacgggctt catcccttcg caagccaaac cgccggcaaa ggtaacggcg
     2461 tgctgctcgg cgatgccgac atcgaaatag cggtcgggga atcgttgttc aaactcaacc
     2521 aagccgctgc cctcgcgcat ggcgggggta atcgcaacca gtcgggaatc tgccgccgcc
     2581 cggtcgcaca gccatttgcc gaacacttgg gtataggtcg gtttggcggc gggcttgggt
     2641 tctttttcag acggcatttg cgccgcgctt tctttaggca ggttggcgac ggcgtggtat
     2701 ttgacgggat cgttttcggc gagtttgtag ccgttgcctt ttttggtaat gacgtgcagc
     2761 aactgagggc ctttgcggct gcgcaagtct ttcaatacgt ccaccagatt ttcgacgttg
     2821 tgtccgtcca cggggccggt gtagcggaag ccgaagtttt caaacaaaga cagcgactgt
     2881 ttggcgtgtt cggcttcttc ggcaagggtt ttgattttgt gttcgacttt ttgggcaaac
     2941 tccatcgcgc cgggtatttt gtctaatacc ttgcccgttt gcgctttgac ggtactcaac
     3001 aggccgtgca tatcgcgcac gacgttgctg gcaaggtatt tcggcagcgc gccgacgttg
     3061 ggggaaatcg acatttcgtt gtcgttgagg acgaccagca aatccacatc catatcgcct
     3121 gcgcaattca aggcttcaaa cgcctgcccc gccgtcatcg cgccgtcgcc gatgatggcg
     3181 acgctgcggc ggtcgctgcc caagagtttg tctgccgccg ccatacccaa agccgcgccg
     3241 atggaagtgg acgaatgccc cacgccgaac gcgtcgtatt ccgactcaca acgtttcgga
     3301 aaacccgcca agccgccgta ttggcgcatc gtgtgcattt ggtttttcct gcctgtcagg
     3361 attttgtgcg gatagctttg gtgtccgaca tcccacacca gcttgtcttc gggcgtgtcg
     3421 tacacatagt gcagggcgat ggtcagttcg accgcgccca gattgctggc gaaatgaccg
     3481 ccggtctgcc cgacagattc cagcagaaag gcgcgcagct cgccggcaag gcgcggcagc
     3541 tgttttttgt ccagacggcg caaatcttgc gggctgtcaa tcaggtcgag tagggggctt
     3601 gggttcatgg tgtgtctttt ttatgtgtcg tccgggtgca acggtcaatt atatatcaag
     3661 agcgtgcggc tgacggctga ttttgccgta tgtcattcgt cctgccgctt ggcgcgcggg
     3721 tgggcttcgt catacaggcg ggcgatgtgg tcgaaatcga gtttggtgta aatctgcgtg
     3781 gtcgaaaggc tgctgtgtcc gagcagctcc tgcaccgccc ggatgtcgcg cgaagcctgc
     3841 aacaggtgtc cggcgtagct gtggcgcatc atatgcggcg aaacgtgcct gccgtcgccg
     3901 ttttgcgccg cccattgcgc caaacgtttt tggatttggc gttggctcag gcgcgtgccg
     3961 ttcctgccgg taaacagggc tttgccgtcc gatgccgtct gacgcagcga cagatagttt
     4021 ttcagggctt ccacgctttt gccgaccagc ggcacctgcc gctgcttgcg ccctttgccg
     4081 gtaacgtgta cccacgcctc gtccaaatag acatcatctg cattcaagcc gtgtatctcg
     4141 ctcacgcgca aaccgctgcc gtacatcagc tcgaacaggg cgtgatcgcg caccgccagc
     4201 gggtcgccgc cgtccacggg caaatccagc atccggttca gccattcctg cggcagggct
     4261 ttgggtacgc gctcgggctg cttcggcggt ttgatgtcgg cggtcgggtc ggtatgcagc
     4321 agaccgcgtt tgaccagcca ggcgcaatac tgccgccaag acgacagctt gcgcgccagc
     4381 gtccgcgcat tcaaaccgcg ctgcgacagc cgccgcaacg ccgccgtaaa atcgcgttgc
     4441 gacaagccct gcggcacgcc gcctgcatct tcagacggca tttgtgccaa cagcgcaaac
     4501 agttcttcca aatcgcgccg gtatgccgcc accgtgtgcc ccgacttgcc ctcgcgcacg
     4561 atgttttcca aataagcgtc aaaatgcgcc gcaaacccgt ccaaaaccat aaccgcccca
     4621 cacaaatatc aaaaaaacag tgaaaacatt atcataaacg acacaccaaa accccgaacc
     4681 gcccaaaatc cgacccgtcc gcccgccgtt atcgttaaca taaaatcaat gagccgttta
     4741 tggttttttg ccgcaaaaaa cattataatc cgccttattt acctattgcc caaggagaca
     4801 caaatggcac tcgtatccat gcgccaactg cttgatcatg ctgccgaaaa cagctacggc
     4861 ctgcccgcgt tcaacgtcaa caacctcgaa caaatgcgcg ccattatgga agccgccgac
     4921 caagtcaacg cgcccgtcat cgtacaggcg agtgcaggtg cgcgcaaata tgcgggcgcg
     4981 ccgtttttgc gccacctgat tctggcggct gtcgaagaat ttccgcacat ccccgtcgtg
     5041 atgcaccaag accacggcgc atcgcccgac gtgtgccaac gctccatcca actgggcttt
     5101 tcctccgtga tgatggacgg ctcgctgatg gaagacggca aaaccccttc ttcttatgaa
     5161 tacaacgtca acgccacccg taccgtggtt aatttctccc acgcttgcgg cgtatccgtc
     5221 gaaggcgaaa tcggcgtgtt gggcaacctc gaaactggcg aagccggcga agaagacggt
     5281 gtaggcgcag tgggcaaact ttcccacgac caaatgctca ccagcgtcga agatgccgtg
     5341 cgtttcgtta aagataccgg cgttgacgca ttggcgattg ccgtcggcac cagccacggc
     5401 gcgtacaaat tcacccgtcc gcccacaggc gacgtgttgc gtatcgaccg catcaaagaa
     5461 atccaccaag ccctgcccaa tacacacatc gtgatgcacg gttccagctc cgttccgcaa
     5521 gaatggctga aagtcatcaa cgaatacggc ggcaatatcg gcgaaaccta cggcgtgccg
     5581 gttgaagaaa tcgtcgaagg catcaaacac ggcgtgcgca aagtcaacat cgataccgac
     5641 ttgcgccttg cttccaccgg cgcggtacgc cgctaccttg ccgaaaaccc gtccgacttc
     5701 gatccgcgca aatatttgag caaaaccatt gaagcgatga agcaaatctg cctcgaccgc
     5761 tacctcgcgt tcggttgcga aggtcaggca ggcaaaatca aaccggtttc cttggaaaaa
     5821 atggcaaacc gttatgccaa gggcgaattg aaccaaatcg tcaaataaca ggttgcttgt
     5881 aaacaaaatg ccgtctgaac cgttgttcgg acggcatttg atttttgctt ctttgacctg
     5941 cctcattgat gcagtatgca aaaaaagata ccataaccaa aatgttta
//
LOCUS       DAWITQ010000123         5963 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.123, whole genome shotgun sequence.
ACCESSION   DAWITQ010000123 DAWITQ010000000
VERSION     DAWITQ010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5963)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5963)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5963
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.123"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(42..965)
                     /gene="truB"
                     /locus_tag="WIX18_001660"
     CDS             complement(42..965)
                     /gene="truB"
                     /locus_tag="WIX18_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEZ5238740.1"
                     /translation="MNTGKPQKRAVNGVLLLDKPEGLSSNTALQKARRLFHAEKAGHT
                     GVLDPLATGLLPVCFGEATKFAQYLLDADKAYTATLKLGEASSTGDAEGEIIATARAD
                     ISLAEFQTACQALTGNIRQVPPMFSALKHEGKPLYEYARKGIVIERKARDITVYAIDI
                     AEFDAPKAVIDVRCSKGTYIRTLSEDIAKHIGTFAHLTALRRTETAGFTIAQSHTLEA
                     LANLNETERDSLLLPCDVLVSHFPQTVLNDYAVHMLHCGQRPRFEEDLPSDTPVRVYT
                     ENGRFVGLAEYQKEICRLKALRLMNTAASAA"
     gene            complement(998..1369)
                     /gene="rbfA"
                     /locus_tag="WIX18_001661"
     CDS             complement(998..1369)
                     /gene="rbfA"
                     /locus_tag="WIX18_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEZ5238741.1"
                     /translation="MRKPQRGYARQDRVKEQIMRELAELVRTGLKDPRAGFITVNEVE
                     VTRDYSHATVFYTILNQDAREITEEVLEHARGHLRSELAKRIKLFKTPELHFKYDESL
                     ERGLNLSALIDQVAAEKPVED"
     gene            1560..2804
                     /gene="clpX"
                     /locus_tag="WIX18_001662"
     CDS             1560..2804
                     /gene="clpX"
                     /locus_tag="WIX18_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HEZ5238742.1"
                     /translation="MSNENRTCSFCGKSKSHVKHLIEGENAFICDECVSNCIEILHED
                     GNDGTPSESAGGEPEESGKLPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRHP
                     KAGANVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ
                     IITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT
                     VASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK
                     DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVK
                     QYQALFGMENVELEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRLPDLKGL
                     KKVVVGKAVIEEGREPELVFES"
     gene            complement(2907..4103)
                     /locus_tag="WIX18_001663"
     CDS             complement(2907..4103)
                     /locus_tag="WIX18_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEZ5238743.1"
                     /translation="MQNYLTPNFAFAPMIPERASGSRVWDTEGREYIDFSGGIAVNAL
                     GHCHPALADALNAQMHKLWHISNIYTTRPAQELAQKLVANSFADKVFFCNSGAEANEA
                     ALKLARKYARDRFGGGKSEIVACINSFHGRTLFTVSVGGQPKYSKDYAPLPQGITHVP
                     FNDIAALEAAVGEQTCAVIIEPIQGESGILPATAEYLQTARRLCDRHNALLILDEVQT
                     GMGHTGRLFAYEHYGVVPDILSSAKALGCGFPIGAMLATEKIAAAFQPGTHGSTFGGN
                     PMACAVGSRAFDIINTPETLNHVREQGQKLQTALLDLCRKTGLFSQVRGMGLLLGCVL
                     DEAYRGRASEITAAALKHGVMILVAGADVLRFAPSLLLNDEDMAEGLRRLEHALTEFA
                     ATSDNP"
     gene            4507..5007
                     /locus_tag="WIX18_001664"
     CDS             4507..5007
                     /locus_tag="WIX18_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238744.1"
                     /translation="MNAMPQTAAQNETLHTCSIIVDDAQDFSPMLLDAGRDDTLISES
                     MIPQIRTVAALIAAERHDFSRSSPAEFTDAADFFAARILVLGVRRFHLDVSLLQILKT
                     ANSRARRFAEKHRLFFTPAQAELSLNKHKNRRLLTVETEHEVENKGNPVANSLAFVRK
                     LHTLPL"
     gene            5092..5646
                     /locus_tag="WIX18_001665"
     CDS             5092..5646
                     /locus_tag="WIX18_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238745.1"
                     /translation="MKKIIASALIATFALAACQDDTQARLEQQQKQIEALQQQLAQQA
                     DDTVYQLTPEAVKDTIPAEAQANGNNGQPVTGKDGQQYIYDQSTGSWLLQSLVGAAAG
                     AFIGNALANKFTRAGNQDSPVARRARAAYHQSARPNARTSRDLNTRSLRAKQQAAQAQ
                     RYRPTTRPPANYRRPAMRGFGRRR"
BASE COUNT         1418 a         1589 c         1609 g         1347 t
ORIGIN      
        1 caacacatta ttcaaacaca gcctgtattt ttaaccgccg ttcaggcggc ggatgccgcc
       61 gtgttcatca ggcgcaaggc tttcagacgg catatttctt tttgatattc cgccagaccg
      121 acaaagcggc cgttttccgt gtaaacgcgt accggcgtgt cggaaggcag gtcttcttcg
      181 aaacgcggac gttgtccgca gtggagcata tggacggcat aatcgtttaa aacggtttgg
      241 ggaaagtgtg aaaccaatac gtcgcagggt agcagcaagc tgtcgcgttc tgtttcgttc
      301 aaatttgcca aggcctcaag cgtgtggctt tgggcgatgg taaagccggc ggtttcagtg
      361 cggcgcaggg cggtcaggtg ggcgaacgtg ccgatgtgtt tggcgatgtc ttcgctgagg
      421 gtgcggatgt aggtgccttt gctgcaacgt acgtcgatga cggctttggg cgcgtcaaat
      481 tcggcaatat cgatggcgta aacggtaatg tcgcgcgctt tgcgttcgat gacgatgcct
      541 ttgcgggcgt attcgtacag cggtttgcct tcgtgcttga gcgcggaaaa cattggcggc
      601 acttggcgga tgttgcctgt cagtgcttgg caggccgtct gaaattcggc taaggaaata
      661 tcggcgcggg cggtggcaat gatttcgcct tcggcatcac ccgtgctgct ggcttcgccg
      721 agtttcagcg tggcggtgta ggctttgtcg gcatccagca ggtattgggc gaacttggtc
      781 gcttcaccga agcagacggg caaaagtccg gttgccaaag ggtcgagcac gccggtatgt
      841 ccggcttttt cggcatgaaa caaacgccgc gctttttgca gcgcggtgtt gctggaaagg
      901 ccttcgggtt tgtccaagag caaaacaccg ttgacggcac gtttttgggg tttgcctgta
      961 ttcatggttc gatgttcgga cggcatgggc atatccgtca gtcttcaacc ggtttttccg
     1021 ccgccacttg atcgataagg gcggacaggt tcaaaccgcg ttccaaagat tcgtcgtatt
     1081 tgaaatgcag ttcgggcgtt ttgaacagct tgatgcgttt ggccaattcg ctgcggaggt
     1141 gtccgcgcgc gtgttccagc acttcttccg taatttcgcg cgcgtcttgg tttaaaatgg
     1201 tgtagaacac ggtggcgtgg ctgtaatcgc gggtaacttc gacttcgttg acggtaatga
     1261 agccggcgcg cgggtctttc agtccggtac ggacgagttc ggcaagctcg cgcataattt
     1321 gttctttgac acggtcttgg cgggcgtagc cgcgttgggg ttttctcatg aatatcctca
     1381 gatttcagat ttggtttcag acggcatttt tgccgccggg gcggttgcga aagggcgtat
     1441 tatagcctaa tcggcgggat tttaaggtaa tacattgata agaacggata tagttattat
     1501 acttggcaac ccgaacggca cgtgccgttt tctgtaacgc atacattgta aagaaagcca
     1561 tgtccaacga aaaccgtact tgttcctttt gcggaaaatc caaatcacac gtcaaacatt
     1621 taattgaggg cgaaaacgcc tttatctgtg acgaatgcgt ctcaaactgt attgaaatat
     1681 tgcatgaaga cggaaatgac ggcacgcctt cggaaagtgc cggaggggag ccggaagaat
     1741 ccggcaagct gcccacgccc gccgaaatcg tcgccaacct caacgaccac gttatcggtc
     1801 aggaacaagc caagaaagcc ttggcggtgt cggtgtacaa ccattacaaa cgcctgcgcc
     1861 atcctaaagc aggagctaat gtcgaattgt cgaaatccaa catcctgctt atcggcccga
     1921 ccggatcggg taaaaccctg ctggcgcaat ctttggcgcg caaactggat gtgccgttcg
     1981 tgatggcgga tgccacaact ttgactgaag caggttatgt cggcgaagac gtcgagcaaa
     2041 tcattaccaa gcttttgggc aaatgtgatt tcgatgtcga aaaagcccag cgcggcattg
     2101 tctatatcga cgaaatcgat aaaatttcac gcaaaagcga caacccgtcg attacccgcg
     2161 acgtatccgg cgaaggtgtg caacaagcct tgttgaaact gattgaaggt acagtggcca
     2221 gcgttccgcc ccaaggcggc cgcaagcatc cgaatcagga atttatcaac gtcgatacca
     2281 ccaacatcct gtttatctgc ggcggcgcgt ttgcaggctt ggaaaaagtc atccgccagc
     2341 gtactgaaaa aggcggtatc ggtttcggtg cgtccgttca cagcaaggac gaaaatgccg
     2401 acattaccaa gctgttcggc atcgtcgaac cggaagactt gattaaattc ggtctgattc
     2461 cagaattaat cggacgtttg cctgtgattg caactttaga agaattggac gaagacgcgc
     2521 tgattaatat tttgaccgag ccgaaaaatg ctttggtcaa gcagtatcag gcgttgttcg
     2581 gtatggaaaa tgtcgaactg gagtttgaag aaggcgcatt gcgttccatc gcgcgtcagg
     2641 caatggaacg caaaaccggc gcgcgcggcc tgaggtccat cgtcgaacgc tgcctgctcg
     2701 atacgatgta ccgcctgcct gatttgaaag gcttgaaaaa agtggtggtc ggtaaggcag
     2761 tcatcgaaga gggcagggaa ccggaattgg tgttcgagtc ctgatggcaa acaaaaccgc
     2821 ttcggaacgt tgaaccacgt ttctgaagcg gttttttgtt tctgatgccg tctgaagcct
     2881 tcccgccttc agacggcatt tgagttttac ggattgtctg atgtcgcggc aaattccgtc
     2941 agcgcgtgtt ccaaacgtcg caaaccttcc gccatatcct catcgttcaa cagtagcgaa
     3001 ggcgcgaaac gcaatacgtc cgcacccgca accaaaatca tcacgccgtg tttcaaggcg
     3061 gcggcggtga tttcggatgc gcgtccgcga taggcttcgt ccaacacgca gccgagtagc
     3121 agccccatcc cgcgaacttg tgagaacaag cccgttttcc tgcacaaatc cagcaatgcc
     3181 gtctgaagtt tctgcccctg ttcacggaca tggtttaaag tttcgggcgt attgatgatg
     3241 tcgaatgcgc ggctgccgac cgcacacgcc atcgggttgc cgccgaaagt cgagccgtgc
     3301 gtgcccggtt ggaaggcggc ggcaatcttt tctgtcgcca gcatcgcgcc gatcggaaag
     3361 ccgcagccca aggcttttgc cgaactcaaa atatcgggaa caacgccgta atgttcatag
     3421 gcaaacagcc tgcccgtatg ccccatcccg gtttgaactt cgtccaaaat caacaacgca
     3481 ttgtgccggt cgcacagacg gcgcgcggtt tgcaaatatt ccgcagtggc gggcaggatg
     3541 ccgctttcgc cctgtatcgg ctcgatgatg accgcgcagg tctgttcgcc gacggcagct
     3601 tccagcgcgg caatatcgtt gaacggaacg tgcgtaatgc cttgcggcag cggtgcataa
     3661 tccttgctgt atttcggctg accgccgacg gacacggtaa acagcgtgcg tccgtggaaa
     3721 ctgttgatac aggcgacgat ttcgcttttt cctccgccga aacggtcgcg cgcatatttc
     3781 cttgccagct tcaacgccgc ctcattcgct tccgcgcccg agttgcagaa aaaaaccttg
     3841 tcggcaaaac tgtttgcaac caatttttgc gccaattcct gcgccggacg cgtcgtatag
     3901 atattggaaa tgtgccacag cttgtgcatc tgcgcgttta aagcatcggc aagggcaggg
     3961 tggcagtgtc ccagcgcatt gacggcgata ccgcctgaaa aatcaatata ttcacgccct
     4021 tccgtatccc aaacgcggct gcctgaagcg cgttcgggaa tcatcggggc aaaggcgaaa
     4081 ttgggggtca gatagttttg cataattgct cctgattgcg gttttgctcg ggattatgca
     4141 ccgtttttca aagcagataa agggaaattg ccgacaatat cgggcagcgg taaaaataaa
     4201 ccgaaatatt ttcaatcgga tagatgaaaa atcaaaaaaa tttcgataaa atgcttgagg
     4261 cgcggcagcg ttttgattta gaatctcccc aatattttta tcttcagacg gcatttcatc
     4321 atgcaaggca aaaaatttac aaccgcttat tgctattggt accacacaga cgtgcggtac
     4381 ttttttgcgc ttgcttgaaa tccatcccat acgcaaaaca ggccgctcga aaatggggcg
     4441 gcttttttgt taccttcaca caggtcgccc gattcggcaa cacacgacag aatcaggaaa
     4501 atgaccatga atgcaatgcc ccaaaccgcc gcacaaaacg aaaccctgca cacttgtagc
     4561 attattgtcg atgatgcgca ggatttttcc cccatgcttc tcgatgcagg gcgggacgac
     4621 acacttatca gcgaatcgat gattccgcaa atccgcaccg ttgccgccct gatagccgcc
     4681 gaacggcacg acttcagccg cagcagcccc gccgagttta ccgatgccgc cgattttttt
     4741 gccgcacgga ttctcgtatt gggcgtgcga cgcttccatc tggacgtatc gctgcttcag
     4801 attttgaaaa ccgccaacag ccgcgcccgc cgctttgccg aaaaacaccg cctgtttttc
     4861 acacccgcac aagccgaatt gagcctgaac aaacacaaaa accgccgcct gctgaccgta
     4921 gaaaccgaac acgaagtcga aaacaaaggc aacccagtcg ccaacagcct cgcatttgtc
     4981 cgcaaactgc acaccctgcc cctgtaaaca tcacgatttg tcggcagaat gcttgccaaa
     5041 attcccgacg gcgatacaat aaaaccgatt ttccacccaa acaggacaca catgaaaaaa
     5101 atcatcgcct ccgcgcttat cgcaacattc gcactcgccg cctgccaaga cgacacgcag
     5161 gcgcggctcg aacagcagca gaaacagatt gaagccctgc aacagcagct cgcacagcag
     5221 gcagacgata cggtttacca actgactccc gaagcagtca aagacaccat tcctgccgaa
     5281 gcacaggcaa acggcaacaa cgggcaaccc gttaccggta aagacgggca gcagtatatt
     5341 tacgaccaat cgacaggaag ctggctgctg caaagcctgg tcggcgcggc ggcaggcgcg
     5401 tttatcggca acgcgctggc aaacaaattc acacgggcag gcaaccaaga cagtcccgtc
     5461 gcccggcgcg cgcgtgcagc ctaccatcag tccgcacgcc ccaatgcgcg caccagcagg
     5521 gatttgaaca cgcgcagcct ccgcgcaaaa caacaggcgg cgcaggcgca gcgttaccgc
     5581 ccgacaacgc gcccgcccgc caattaccgc cgaccggcta tgcgcggttt cggcaggagg
     5641 cggtaaaccc ggcgcgccaa tgccgtctga agggctttca gacggcattt tgtttccaag
     5701 agtttgatgt cgggatggca attctgattt acgtgcgttg gcagggcggc attgtcatgc
     5761 cgccgttggg ttttcagacg gcatcatatc gaaccgtcag gtcgtggggt gagcattctt
     5821 gcccaccgtt gtaagggcgg gattttttgg tgaacaggaa tgcccaccct gcatctgaaa
     5881 cccttctgcg tcattcccac gcaggaagga atttagatat ttgaatttac agaaattttc
     5941 aatcgttgcc aaagcggaaa agg
//
LOCUS       DAWITQ010000124         5880 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.124, whole genome shotgun sequence.
ACCESSION   DAWITQ010000124 DAWITQ010000000
VERSION     DAWITQ010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5880)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5880)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5880
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.124"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(147..1190)
                     /locus_tag="WIX18_001666"
     CDS             complement(147..1190)
                     /locus_tag="WIX18_001666"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HEZ5238746.1"
                     /translation="MSKKIKVGIVGATGYTGVELLRLLAAHPDVEVAAVTSRSEAGTA
                     VADYFPSLRGVYGLAFQTPDEAGLEQCDIVFFATPNGIAMKDAPRLIEQGVRVIDLSA
                     DFRIRDIPTWEHWYGMTHAAPDLVSQAVYGLSELNREAVAQARLVANPGCYPTCVSLP
                     LVPLLRQCRLKPGMPLIADCKSGVSGAGRKGNVGSLLCEVGDNFKAYGIAGHRHLPEI
                     RQTIAGLQDGIAEGFVFTPHLAPMIRGMHATVYLHLSDGICPETILRDYYRDSLFVDI
                     LPAGSTPETRSVRGANLCRISIQQAAQSDVWVVLSVIDNLVKGAAGQAVQNMNIMFGL
                     KETHGLDAIPLLP"
     gene            complement(1187..1468)
                     /locus_tag="WIX18_001667"
     CDS             complement(1187..1468)
                     /locus_tag="WIX18_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238747.1"
                     /translation="MKTLVLLLLSFSTTTAFAAYGLGLGQAPKYPADFRAYGYVYSGR
                     QGWVLKTEADAIKLDTLFKRFVYRPSTANQNPVGQRSDGIPANHTKEKP"
     gene            1836..2990
                     /locus_tag="WIX18_001668"
     CDS             1836..2990
                     /locus_tag="WIX18_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEZ5238748.1"
                     /translation="MSIHLDFGISPKTFRQTYLYQKPKLFKGAARNLEAASWKDINEI
                     YQRADPTAPLFYLRKKGAIVPKEEYVESFDALGKTRYRFIKSVIYEHMKNGVSLVYNH
                     INNEPFSDHISRQVARFAGAHTIVSGYLAFGSDESYKNHWDTRDVYAIQLFGKKRWQL
                     TAPDFPMPLYMQQTKDTDISIPEHIDMDIILEAGDVLYIPRGWWHRPIPLGCETFHLA
                     VGTFPPNGYNYLEWLMKKFPTIESLRHSFSDWEQDRTRINDTAAQIAAMIADPVNYEA
                     FSEDFLGKERTDTAFHLEQFANPNATPLSDDVRLRLNANNLDTLEKGYLIGNGMKISV
                     DELGKKVLEHIGKNEPLLLKNLLVNFNQGKHEEVRKLIYQLIELDFLELL"
     gene            3410..3670
                     /locus_tag="WIX18_001669"
     CDS             3410..3670
                     /locus_tag="WIX18_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin transporter"
                     /protein_id="HEZ5238749.1"
                     /translation="MERKNNIIELSIENLELIYGGGLGERILEGGANGAQIGGSIGAG
                     IGLGVGIVSGGIPAGPAIILGGTVGAAVGAVTGMGVAAYEYY"
     gene            3830..4456
                     /locus_tag="WIX18_001670"
     CDS             3830..4456
                     /locus_tag="WIX18_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretion protein"
                     /protein_id="HEZ5238750.1"
                     /translation="MNRPKQPFFRPEVTVARQTSLTGKVILTRPLSFSLWTTFASISA
                     LLIILFLIFGNYTRKTTVEGQILPASGVIRVYAPDTGTITTKFVEDGEKVKAGDKLFA
                     LSTSRFGAGGSVQQQLKTEAVLKKTLAEQELGRLKLIHENETRSLKATVERLENQKLH
                     ILQQIDGQKRRIRLAEDQWQKRHWADRNCRDWAWYPPIWRRAANLFIL"
     gene            4408..4608
                     /locus_tag="WIX18_001671"
     CDS             4408..4608
                     /locus_tag="WIX18_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238751.1"
                     /translation="MVSSDLAKSSEPVYLVKIKPDKSTITAYGEEKPLQIGMTLEADI
                     LHEKRRLYEWVLELIYSISGKL"
     gene            4921..5223
                     /locus_tag="WIX18_001672"
     CDS             4921..5223
                     /locus_tag="WIX18_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238752.1"
                     /translation="MTWVGGSGNAQQSSYYCEICESAGLNDTGNPDKSLGLPNNTFSN
                     PPGWGATIGALAGSRIGMPEFGTFASHAIENFDWSWYRRYREIAETIEREYSGGLP"
     gene            5507..5746
                     /locus_tag="WIX18_001673"
     CDS             5507..5746
                     /locus_tag="WIX18_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEZ5238753.1"
                     /translation="MPHLQNLSLGLKKKLPVILQTEISECGLACLAAVAGFHGFHTNL
                     RALRSKYCPRPLQNSPKSPKCLGGNFGEFCKGLIL"
BASE COUNT         1584 a         1257 c         1431 g         1608 t
ORIGIN      
        1 attcccgctt ttgcgggaat gacgggattt tagatttttg ttttcgcgga ataatgagcc
       61 aaaagccgtc tgaacctaaa aaaccgccac tttcagatgg catcaaaaaa ccgcaggcac
      121 gatacctgcg gtttgccgtt tgcgtttcag gggagcaggg ggattgcgtc caagccgtgt
      181 gtttccttca gtccgaacat gatgttcata ttttgcaccg cctgacccgc cgcgcctttg
      241 acgaggttgt cgatgacgga aaggacgacc cacacatcgg attgcgccgc ctgttggatg
      301 ctgatgcggc agaggtttgc gccgcgcacg ctgcgggttt cgggtgtcga accggcgggc
      361 aggatgtcca cgaacaggct gtcgcggtaa tagtcgcgca ggatggtttc ggggcagatg
      421 ccgtctgaaa ggtggaggta aacggtggcg tgcataccgc gtatcatcgg cgcgaggtgc
      481 ggcgtgaata cgaatccttc ggcgatgccg tcctgaagcc cggcgatggt ctgcctgatt
      541 tcgggcaggt ggcggtgtcc agctatgccg taggctttga agttgtcgcc gacttcgcac
      601 aacagcgaac cgacattgcc tttcctgccc gcgccggaca cgccggattt gcagtcggca
      661 atcagcggca taccgggctt cagacggcat tgccgcaaca gcggcacgag cggcagggat
      721 acgcaggtcg ggtagcagcc ggggttggcg acgaggcgtg cctgtgcgac ggcttcgcgg
      781 ttgagttcgc tcaatccgta cacggcttgg gaaacgaggt cgggggcggc gtgggtcatg
      841 ccgtaccagt gttcccaggt cggaatgtcc cgtatgcgga agtcggcgga aaggtcgatg
      901 acgcgcacgc cctgttcaat caggcgcggc gcgtctttca tggcgatgcc gttgggcgtg
      961 gcgaagaaga cgatgtcgca ttgttccaaa cctgcctcgt cgggcgtttg gaaggcgagg
     1021 ccgtacacgc cgcgcaaact cggaaagtaa tcggcaactg cagttcccgc ttcgctgcgg
     1081 ctggttacgg cggcgacttc gacatcggga tgggcggcaa gcaggcgcag cagttccacg
     1141 cccgtgtagc ccgtcgcgcc gacaatgccg actttgattt ttttactcat ggtttttcct
     1201 ttgtgtggtt ggcgggtatg ccgtccgaac gctgtccgac ggggttttga ttggcggtgg
     1261 aaggacggta cacaaagcgt ttgaaaagcg tgtctaattt aatggcatcc gcctctgttt
     1321 ttaaaaccca gccctgccgt ccggaataaa cataaccgta ggcgcgaaag tcggcaggat
     1381 atttcggtgc ctgccccaaa cccaaaccgt atgcggcgaa agcggtggtc gtggagaagg
     1441 aaagcaggag gaggacgagg gttttcataa ggttccaaac cggacggggc gatgaagccc
     1501 gattatagca aaaggtcgtc tgaaaaccgt tttcagacga ccttttattt aattacaata
     1561 aaaatgttaa caacaaaaaa caaaccgctt tttttcgttt ggaaacaaaa caaattttta
     1621 tagtggatta aatttaaacc agtacagcgt tgcctcgcct tgccttgccg tactatctgt
     1681 actgtctgcg gtttcgtcgc cttttcctga tttttgttaa tccactataa ctaaaattgt
     1741 caacaattcc ttgacgcaca cacaaaaaaa actttaatat ttgtaaatat atgtaacatt
     1801 ataaatttta aatattttct gagtaagggg aagtaatgag catccatctc gacttcggca
     1861 ttagtcctaa aacgttccga cagacttatc tgtatcaaaa gcccaagctc tttaaaggag
     1921 cggctcggaa tctcgaagcc gcatcttgga aagatatcaa cgagatatac caacgagcag
     1981 acccaaccgc accgctgttt tatctgcgta aaaaaggtgc aattgttcct aaagaagaat
     2041 acgtcgaaag tttcgacgct ttgggcaaaa ctcgctaccg ttttattaaa tccgttatct
     2101 acgaacatat gaagaatggt gtgtcgttag tctataacca tattaacaac gagccgtttt
     2161 cagatcatat ttcccgtcaa gtcgcccgct ttgctggcgc acatactatt gtcagtggat
     2221 atcttgcttt tggcagcgac gaatcttata aaaaccattg ggacacccgc gatgtgtatg
     2281 ccatccagct tttcggcaag aaacgttggc aacttactgc ccctgatttc cctatgccat
     2341 tgtatatgca acagactaaa gatactgata tttccattcc tgaacatatc gatatggata
     2401 ttatccttga agcaggtgat gtcctctaca tcccgcgcgg ttggtggcac agacctatcc
     2461 cgctcggctg tgaaaccttc cacctcgctg tcggtacctt tccgcccaac ggctataatt
     2521 acctcgagtg gctaatgaag aaattcccca cgatagaaag tctgcgccac agtttctcag
     2581 actgggagca agataggacg cgtatcaacg atactgccgc acaaattgct gccatgattg
     2641 ccgaccccgt caattacgaa gccttcagtg aagacttcct cggcaaagaa cgcaccgata
     2701 ccgcttttca tctcgaacag ttcgcgaatc ccaacgctac tccgctttca gacgacgtca
     2761 ggttgagact aaatgccaat aatttggata cgttggaaaa ggggtatttg attgggaatg
     2821 ggatgaagat aagcgtagat gaattgggga aaaaagtttt agaacacatc ggtaagaatg
     2881 aaccgttatt gttgaaaaat ctactggtta acttcaatca gggaaaacat gaagaagtta
     2941 ggaagttgat ttatcagttg atagagttag attttctgga acttttgtga gggattctat
     3001 gaaaaactgg aagcaattta catttttcgt aatattagta atagcttgtt atcaagtgct
     3061 atatttttta tcagatatgt ttcttctcga ctacattaac aaatatagtt ggaatttgaa
     3121 ttttattcag ggtactttga attttttttc aatatatctg ccatatgttt ttgttagccg
     3181 aatttttagg aatactaacc aatgaaagac taggctatga aatcaaaatt tatgtataag
     3241 ttactggtac ttgcaaagta cctgtatatt ttaatttgta tatcaatacc aatcgttttt
     3301 atttatgaaa gctaccaagg agatgatgtt gattttatga tttatattca tgcttttatt
     3361 attttttcca tattgggtgt attgactcaa tattctacgt ctaatttttt tggaaaggaa
     3421 aaataacatc attgaactat ccattgagaa tctggagcta atttatggcg gaggcttagg
     3481 ggagagaatc cttgaaggag gagcaaatgg tgcacaaata ggaggatcaa ttggtgcagg
     3541 tattggtctg ggtgtcggta tagtttctgg tggtattcct gccggaccgg ctattattct
     3601 cggtggcaca gttggtgctg ctgttggtgc tgtaactggt atgggtgttg cagcatatga
     3661 gtattactaa gaaactcagc ccaaagggac agtaacggtc ggtccgattt ctgcttttgc
     3721 tgtggacaaa tcaggaaacg gctacactga cggtacagat tactgctgat atttctcatc
     3781 tttcagacga tctctagggg tcgtctgaaa ctttcttaac ttcaatttta tgaatagacc
     3841 caagcaacct ttcttccgcc ctgaagtcac agttgcccgg caaaccagcc tgacgggtaa
     3901 agtgattctg acacgaccgt tgtcattttc cctatggacg acatttgcat cgatatctgc
     3961 gttactgatt atcctgtttt tgatatttgg taactatacg cgaaagacaa cagtggaggg
     4021 acaaatttta cctgcatcgg gcgtaatcag ggtgtatgca ccggatacgg ggacaattac
     4081 aacgaaattc gtggaagatg gagaaaaggt caaggctggc gacaagctat ttgcgctttc
     4141 gacctcacgt ttcggcgcag gaggtagcgt gcagcagcag ttgaaaacgg aggcagtttt
     4201 gaagaaaacg ttggcagaac aggaactggg tcgtctgaag ctgatacacg agaatgaaac
     4261 gcgcagcctt aaagcaactg tcgaacgttt ggaaaaccag aaactccata ttttgcaaca
     4321 gatagacggt cagaaaaggc gcattagact tgcggaagat cagtggcaaa aacggcactg
     4381 ggcagacagg aattgtcggg attgggcatg gtatcctccg atttggcgaa gagcagcgaa
     4441 cctgtttatc ttgtgaaaat aaaacccgac aaatcaacca tcactgcata cggtgaggaa
     4501 aaaccgctgc aaatcggcat gacgttggaa gcagacatcc tgcacgagaa acggcgattg
     4561 tacgaatggg tattggagct gatttatagt atatcgggca aactgtaaga cttgaggctg
     4621 aaagataaag aagttgtctg aaaccttttc agacgaccag aagacaatat ataaaaacac
     4681 aaacttcaaa actgcctgaa accatcctct tttacaggca ctccgtctgt aaaagcaagg
     4741 atagggcatc tgcccttttg attgtttgat taacgataca aggagtttca aaatgagagt
     4801 tttatagtgg attaacaaaa accagtacag cgttgcctcg ccttgccgta ccatttgtac
     4861 tgtctgcggc ttcgtcgcct tgtcctgatt taaatttaat ccactatatg tgttcatgaa
     4921 atgacttggg tcggaggctc aggtaatgcg caacaaagtt catattattg cgaaatttgc
     4981 gaatctgcag ggcttaacga tacgggaaat cctgataaat ctttaggatt gccaaacaat
     5041 acgttcagta atccgcctgg ttggggagct acaatcggag ctttagcagg tagccgcata
     5101 gggatgcctg aatttggtac gtttgcgagc catgccattg aaaatttcga ctggtcatgg
     5161 tatcgacgtt atagggaaat tgccgaaacg attgaacgag aatattcagg cggtttgcct
     5221 taatagttga ggaggtcatg atgtttgcca aacattatca attcatcgca ctcggcatca
     5281 tgctgcttct ttatatgttg attctctata cgaccgattt ttccaatctg acgtattgga
     5341 tgctgttttt tatctgtttt attacaggaa aaatattagc tcgtttgtta gagaaaagct
     5401 ttaaataaaa tagcagctag tcgcaaaagg tcgtctgaaa ccttttcagg cggcctttct
     5461 aaaatacatc caacttccta atccctattt ttcaaaaagg aaatctatgc cccatctgca
     5521 aaacctgtct ttgggcttaa agaaaaagct gcctgttatc ctgcaaacag aaatatcaga
     5581 atgcggcttg gcatgtctgg cggctgtggc gggatttcat ggtttccata cgaatttacg
     5641 cgcactgcgt tcaaaatact gtccgagacc tttgcaaaat tccccaaaat cccctaaatg
     5701 tcttggtggg aattttgggg aattttgcaa aggtctcatt ctataactgt aaatactttt
     5761 aaatttatga caaaatagta aatattgcta aaataatatt gatgtcatga aattttttcc
     5821 tgctccatgt ctgttggtta tcctggctgt catacccctt aaaaccttag ctgccgatga
//
LOCUS       DAWITQ010000125         5866 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.125, whole genome shotgun sequence.
ACCESSION   DAWITQ010000125 DAWITQ010000000
VERSION     DAWITQ010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5866)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5866)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5866
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.125"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            41..454
                     /locus_tag="WIX18_001674"
     CDS             41..454
                     /locus_tag="WIX18_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEZ5238754.1"
                     /translation="MMPAYAYAALAFSAFTSATLLPGTSEAAFALFVRRFPEHAYGAL
                     LCAGLANGLGSMVSYWMGRLLPSRKMPSEKTLNLMRRFGIWLLPFAWLPVVGDALPLA
                     AGWLRLNPWTSGLMLVIGKTARYAFILWGMQYYAA"
     gene            500..1129
                     /gene="nth"
                     /locus_tag="WIX18_001675"
     CDS             500..1129
                     /gene="nth"
                     /locus_tag="WIX18_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HEZ5238755.1"
                     /translation="MNRHIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATD
                     VGVNKATAKLFPVADTPQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNG
                     EVPEDREALESLPGVGRKTANVVLNTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVE
                     DKLMRFIPKEFLMDAHHWLILHGRYTCKALKPQCQTCIINDLCEYPAKA"
     gene            1267..2766
                     /locus_tag="WIX18_001676"
     CDS             1267..2766
                     /locus_tag="WIX18_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HEZ5238756.1"
                     /translation="MFKKYQYLALAALCAASLAGCDKAGSFFGADKKEASFVERIEHT
                     KDDGSVSMLLPDFVQLVQSEGPAVVNIQAAPAPRTQNGSGNAETDSDPLADSDPFYEF
                     FKRLVPNMPEIPQEEADDGGLNFGSGFIISKDGYILTNTHVVTGMGSIKVLLNDKREY
                     TAKLIGSDVQSDVALLKIDATEELPVVKIGNPKDLKPGEWVAAIGAPFGFDNSVTAGI
                     VSAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISF
                     AIPIDVAMNVAEQLKNTGKVQRGQLGVIIQEVSYGLAQSFGLDKAGGALIAKILPGSP
                     AERAGLQAGDIVLSLDGGEIRSSGDLPVMVGAITPGKEVSLGVWRKGKEITVAVKLGN
                     ASEQTGSSSEPDKAPYAEHQSGTFSVESAGITLQTHTDSSGGRLVVVRVSGAAERAGL
                     RRGDEILAVGQVPVNDEDGFRKAMDKAGKNVPLLVMRRGNTLFIALNLQ"
     gene            2969..4489
                     /locus_tag="WIX18_001677"
     CDS             2969..4489
                     /locus_tag="WIX18_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HEZ5238757.1"
                     /translation="MQLIDYSHSFFSVVPPFLALALAVITRRVLLSLGIGILVGVAFL
                     VGGNPVDGLTHLKDMVVGLAWSDGDWSLGKPKILVFLILLGIFTSLLTYSGSNQAFAD
                     WAKRHIKNRRGAKMLTACLVFVTFIDDYFHSLAVGAIARPVTDKFKVSRAKLAYILDS
                     TAAPMCVLMPVSSWGASIIATLAGLLVTYKITEYTPMGTFVAMSLMNYYALFALIMVF
                     VVAWFSFDIGSMARFEQAALNEAHDETAASDATKGRVYALIIPVLALIASTVSAMIYT
                     GAQASETFSILGAFENTDVNTSLVFGGTCGVLAVVLCTLGTIKTADYPKAVWQGAKSM
                     FGAIAILILAWLISTVVGEMHTGDYLSTLVAGNIHPGFLPVILFLLASVMAFATGTSW
                     GTFGIMLPIAAAMAVKVEPALIIPCMSAVMAGAVCGDHCSPISDTTILSSTGARCNHI
                     DHVTSQLPYALTVAAAAASGYLALGLTKSALLGFGTTGIVLAVLIFLLKDKKRANA"
     gene            4546..5631
                     /gene="nagZ"
                     /locus_tag="WIX18_001678"
     CDS             4546..5631
                     /gene="nagZ"
                     /locus_tag="WIX18_001678"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HEZ5238758.1"
                     /translation="MTVPHIPRGPVMADIAAFRLTGEERQRLLDPAIGGIILFRRNFQ
                     NIEQLKTLTAEIKALRTPELIIAVDHEGGRVQRFIEGFTRLPAMSTLGEIWDKDGASA
                     AETAAGQVGRVLATELSACGIDLSFTPVLDLDWGNCPVIGNRSFHHNPEAVAHLALAL
                     QKGLAKGGMKSCGKHFPGHGFVEGDSHLVLPEDRRSLSELEAADLAPFHIMSREGMAA
                     VMPAHVVYPQVDTKPAGFSEIWLKQILRRDIGFKGVIFSDDLTMEGACGAGGIKERAR
                     ISFEAGCDIVLVCNRPDLVDELREDFRIPDNPALAQRWQYMANTLGSAAAQAVMQTAD
                     FQEAQAFVAGLASPQDTAGGVKVGEAF"
     gene            5712..5788
                     /locus_tag="WIX18_001679"
     tRNA            5712..5788
                     /locus_tag="WIX18_001679"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5746..5748,aa:Pro,seq:cgg)
BASE COUNT         1325 a         1806 c         1489 g         1246 t
ORIGIN      
        1 caatccgtcg ccgatttttg cctgtttgag actgtttgca atgatgcccg cctacgccta
       61 cgccgcgctc gccttttccg ccttcacttc cgccaccctc ctgcccggca catccgaagc
      121 cgcctttgcc ctgttcgtcc gccgctttcc cgaacacgca tacggcgcgt tgctgtgcgc
      181 cggccttgcc aacggattgg gcagtatggt ttcctattgg atgggacgtt tgctgccttc
      241 ccgaaaaatg ccgtctgaaa aaacactgaa tctgatgcgg cgtttcggta tttggctgct
      301 tccgtttgcc tggctgcccg tcgtcggcga cgcactgccg cttgccgccg gctggctgcg
      361 gttgaatccg tggacaagcg ggctgatgct ggttatcggc aaaacggcgc gttacgcctt
      421 cattctgtgg ggaatgcaat attacgccgc ctgaaccgtg cgttataatg ccgaccgcac
      481 aaaccgactg cacaaaaaaa tgaacagaca catccgccaa gaaattttcg aacgcttccg
      541 cgccgccaac ccccatccga ccaccgagct gaatttcaac tcccctttcg agcttttaat
      601 tgccgttctg ctttcggcgc aggcgaccga tgtcggcgta aacaaggcga cggcgaagct
      661 gtttccggtt gccgatacgc cgcaggcgat gctggatttg ggtttggacg gcgtgatgga
      721 atacacgaaa accatcgggc tgtataaaac caagtccaag cacatcatgc aaacctgccg
      781 catcctgctg gaaaaataca acggcgaagt gccggaagac cgcgaggctt tggaatcgtt
      841 gcctggcgtg gggcgcaaaa cggcaaacgt ggtattgaac acagcgttcg gacaccccgt
      901 tatggcggtc gatacgcata ttttccgcgt gtccaaccga accaaaatcg cccccgggaa
      961 agatgtgcgc gaagtcgaag acaaactgat gcgcttcatt cctaaagaat ttctgatgga
     1021 cgcgcaccac tggctgattt tgcacggacg ctacacctgc aaggcactca aaccgcaatg
     1081 ccaaacctgc atcatcaacg atttgtgcga atatcccgcc aaagcctgac cgccgccgcc
     1141 cttcaaaatg aaacgcttga aaattcggac ggacgttgta gaatttcaac ctatgccgtc
     1201 tgaagccgac aaaatgcgct tcagacggca ttaaagccgg taccggcatc cgacaaagga
     1261 caaaacgtgt tcaaaaaata ccaatacctc gctttggcag cactgtgtgc cgcctcgctg
     1321 gcaggctgcg acaaagccgg cagctttttc ggtgcggaca aaaaagaagc atccttcgta
     1381 gaacgcatcg aacacaccaa agacgacggc agcgtcagta tgctgctgcc cgactttgtc
     1441 caactggttc aaagcgaagg cccggcagtc gtcaatattc aggcagcccc cgccccgcgc
     1501 acccaaaacg gcagcggcaa tgccgaaacc gattccgacc cgcttgccga cagcgacccg
     1561 ttctacgaat ttttcaaacg cctcgtcccg aatatgcccg aaatccccca agaagaagca
     1621 gatgacggcg gattgaactt cggttcgggc ttcatcatca gcaaagacgg ctatattctg
     1681 accaatacgc acgtcgttac cggcatgggc agtatcaaag tcctgctcaa cgacaagcgc
     1741 gaatataccg ccaaactcat cggttcggat gtccaatccg atgtcgccct tctgaaaatc
     1801 gacgcaacgg aagagctgcc cgtcgtcaaa atcggcaatc ccaaagattt gaaaccgggc
     1861 gaatgggtcg ccgccatcgg cgcgcccttc ggcttcgaca acagcgtgac cgccggcatc
     1921 gtgtccgcca aaggcagaag cctgcccaac gaaagctaca cacccttcat ccaaaccgac
     1981 gttgccatca atccgggcaa ctccggcggc ccgctgttca acctgaaagg acaggtcgtc
     2041 ggcatcaact cgcaaatata cagccgcagc ggcggattca tgggcatttc cttcgccatc
     2101 ccgattgacg ttgccatgaa tgtcgccgaa cagctgaaaa acaccggcaa agtccaacgc
     2161 ggacaactgg gcgtgattat tcaagaagta tcctacggtt tggcacaatc gttcggtttg
     2221 gacaaagccg gcggcgcact gattgccaaa atcctgcccg gcagccccgc agaacgtgcc
     2281 ggcctgcagg cgggcgacat cgtcctcagc ctcgacggcg gagaaatacg ttcttccggc
     2341 gaccttcccg ttatggtcgg cgccattacg ccgggaaaag aagtcagcct cggcgtatgg
     2401 cgcaaaggta aggaaatcac cgttgccgtc aaactgggca atgcttccga acaaaccggt
     2461 tcctcgtccg agccggacaa agccccttat gccgaacacc aatccggtac gttctcggtc
     2521 gaatccgcag gcattaccct tcagacacat accgacagca gcggcggacg gcttgtcgtc
     2581 gtgcgggttt cgggggcggc agaacgcgca ggcttgaggc gcggcgacga aatccttgcc
     2641 gtcgggcaag tccccgtcaa tgacgaagac ggtttccgca aagctatgga caaggcaggc
     2701 aaaaacgtcc ccctgctggt catgcgccgt ggcaacacgc tgttcatcgc attaaacctg
     2761 caataacaca cataatttaa ccaaaatatt ttttaaatga taaaatgccc gtcaataccg
     2821 attaacgggc attttacaga aatcagttgg ttgattttaa acaaatattt tttacgacaa
     2881 aaaatatttc cgcccatttt gccaacaaaa cccaaaccgg aggcggacag atacgctccc
     2941 atccggacgc ttaacacccc cgtaaaccat gcagctgatc gactattcac attcattttt
     3001 ctcggttgtg ccaccctttt tggcactggc acttgccgtc attacccgcc gcgtactgct
     3061 gtctttaggc atcggtattc tggtcggcgt tgcctttttg gtcggcggca accccgtcga
     3121 cggtctgaca cacctgaaag acatggtcgt cggcttggct tggtcagacg gcgattggtc
     3181 gctgggcaaa ccaaaaatct tggttttcct gatacttttg ggtattttta cttccctgct
     3241 gacctactcc ggcagcaatc aggcgtttgc cgactgggca aaacggcaca ttaaaaaccg
     3301 gcgcggcgcg aaaatgctga ccgcctgcct cgtgttcgta acctttatcg acgactattt
     3361 ccacagtctc gccgtcggtg cgattgcccg ccccgttacc gacaagttta aagtttcccg
     3421 cgccaaactc gcctacatcc tcgactccac tgccgcgcct atgtgcgtgc tgatgcccgt
     3481 ttcaagctgg ggcgcgtcga ttatcgccac gcttgccgga ctgctcgtta cctacaaaat
     3541 caccgaatac acgccgatgg ggacgtttgt cgccatgagc ctgatgaact attacgcact
     3601 gtttgccctg attatggtgt tcgtcgtcgc atggttctcc ttcgacatcg gctcgatggc
     3661 gcgtttcgaa caagccgcgt tgaacgaagc ccacgatgaa actgccgctt cagacgctac
     3721 caaaggtcgt gtttacgcac tgattattcc cgttttggcc ttaatcgcct caacggtttc
     3781 cgccatgatc tacaccggtg cacaggcaag cgaaaccttc agcattttgg gtgcatttga
     3841 aaatacggac gtgaacactt cgctggtatt cggcggcact tgcggcgtgc ttgccgtcgt
     3901 cctctgcacg ctcggcacga ttaaaaccgc cgattatccc aaagccgttt ggcagggtgc
     3961 gaaatccatg ttcggcgcaa tcgccatttt aatccttgcc tggctcatca gtacggttgt
     4021 cggcgaaatg cacacgggcg actacctctc cacgctggtt gcgggcaaca tccatcccgg
     4081 cttcctgccc gtcatccttt tcctgctcgc cagcgtgatg gcgtttgcca caggcacaag
     4141 ctgggggacg ttcggcatca tgctgccgat tgccgccgcc atggcggtca aagtcgaacc
     4201 cgcgctgatt atcccgtgta tgtccgcagt aatggcgggg gcggtatgcg gcgaccactg
     4261 ctcgcccatt tccgacacga ccatcctgtc gtccaccggc gcgcgctgca accacatcga
     4321 ccacgttacc tcgcaactgc cttacgcctt aaccgttgcc gccgccgccg catcgggcta
     4381 cctcgcattg ggtctgacaa aatccgcgct gttgggcttt ggcacgacag gcattgtatt
     4441 ggcggtgctg atttttctgt tgaaagataa aaaacgcgcc aacgcctgac ccctttccct
     4501 gttcagacgg catatgccgt ctgaagcttt ttggagcaaa ccgcaatgac cgtcccccat
     4561 attccgcgcg gccccgtcat ggcagacatt gccgccttcc gcctgaccgg agaagaaagg
     4621 caacgcctgc tcgaccccgc aatcggcggc atcatcctct tccgccgcaa cttccaaaac
     4681 atcgaacaac tcaaaacact caccgccgaa atcaaagccc tgcgcacacc cgaactcatt
     4741 atcgccgtcg atcacgaagg cggcagggtg caacgtttca tcgaaggctt cacccgcctg
     4801 cccgcaatga gtacgctcgg cgagatttgg gacaaagacg gcgcgtccgc cgccgaaacc
     4861 gccgccggac aagtcggccg ggttttggca accgagcttt ccgcctgcgg catcgatttg
     4921 tccttcacgc ccgtcttaga tttggactgg ggaaactgcc ccgtcatcgg caaccgcagt
     4981 ttccaccaca atcccgaagc ggtcgcccac ctcgccctcg cccttcaaaa aggtttggca
     5041 aaaggcggta tgaaatcctg cggcaaacat tttcccggac acggatttgt cgaaggagac
     5101 agccatctgg tcttgccgga agacaggcgc agcctgtccg aactcgaagc cgccgacctc
     5161 gcccccttcc acattatgag ccgcgaaggt atggcggcgg ttatgcccgc ccacgtcgtt
     5221 tatccacaag tggacacaaa gcccgcaggg ttttccgaaa tctggctcaa acaaattttg
     5281 cgccgcgaca tcgggtttaa aggcgtaatt ttctcggatg atttgactat ggagggcgcg
     5341 tgcggggcag gcggcatcaa agaacgcgcc cgcatttcct ttgaggcagg ttgcgacatc
     5401 gtcctcgtct gcaaccgtcc cgaccttgtg gacgaactgc gcgaagattt ccgcattcct
     5461 gacaatcccg ctttggcgca acgttggcaa tacatggcca acacgctcgg cagtgccgcc
     5521 gcgcaagccg ttatgcagac ggcggatttc caagaggcgc aagcctttgt tgccggcctt
     5581 gcctcgccgc aagacacggc gggcggcgta aaagtcggcg aagcctttta aatccgcccg
     5641 acacgctgca aaaaggcaaa acggtatagg cacgccgtat tttttgcgct ataatcacgc
     5701 cttacttaat tcggaatgta gcgcagcccg gtagcgcact tcgttcggga cgaaggggtc
     5761 ggaggttcga atcctctcat tccgaccaaa tccaaaccgc ctcggcatcc attgccggag
     5821 cggtttttcc ttttggcggc aacagaaaaa tgccgtctga aacaga
//
LOCUS       DAWITQ010000126         5848 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.126, whole genome shotgun sequence.
ACCESSION   DAWITQ010000126 DAWITQ010000000
VERSION     DAWITQ010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5848)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5848)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5848
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.126"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(98..1015)
                     /gene="thrB"
                     /locus_tag="WIX18_001680"
     CDS             complement(98..1015)
                     /gene="thrB"
                     /locus_tag="WIX18_001680"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HEZ5238759.1"
                     /translation="MSVYTSVSDDEMRGFLDDYDLGEFVSLQGIAQGITNSNYFLTTT
                     SGRYVLTVFEVLKQEELPFFLELNRHLSMKGVAVAAPVARKDGRLDSVLAGKPACLVA
                     CLKGSDTALPTAEQCFHTGAMLAKMHLAAADFPLEMENPRYDAWWTEACARLLPVLSQ
                     DDAALLCSEIDALKDNLGNHLPSGIIHADLFKDNVLLDGGQVSGFIDFYYACRGNFMY
                     DLAIAVNDWARTADNKLDEALKKAFIGGYEGVRPLSAEEKAYFPTAQRAGCIRFWVSR
                     LLDFHFPQAGEMTFIKDPNAFRNLLLSLG"
     gene            complement(1051..1779)
                     /gene="ubiG"
                     /locus_tag="WIX18_001681"
     CDS             complement(1051..1779)
                     /gene="ubiG"
                     /locus_tag="WIX18_001681"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HEZ5238760.1"
                     /translation="MGGKMSDKKYNVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLR
                     LDYIDGHADLRGKRVLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALNN
                     VADIEYECIRVEDLAEAEPHSFDVVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFST
                     INKNPKSYLHLIVAAEYLLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYH
                     VLSQTYALCDSTDVNYMFACRPAF"
     gene            1931..3172
                     /locus_tag="WIX18_001682"
     CDS             1931..3172
                     /locus_tag="WIX18_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235268.1"
                     /note="tryptophan transporter of high affinity; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan permease"
                     /protein_id="HEZ5238761.1"
                     /translation="MPTKTPSLFGGAMIIAGTVIGAGMLANPTATSGVWFTGSLAVLL
                     YTWFSMLSSGLMILEVNTHYPHGASFDTMVKDLLGRSWNIINGIAVAFVLYLLTYAYI
                     FVGGDLTAKGLGSAAGGNVSLTVGQLVFFGILAFCVWASARLVDRFTSVLIGGMVLTF
                     IWATGGLIADAKLPVLFDTQAPTGTNYWIYVATALPVCLASFGFHGNVSSLLKYFKGD
                     APKVAKSIWTGTLIALVIYVLWQTAIQGNLPRNEFAPVIAAEGQVSVLIETLSKFAQT
                     GNMDKILSLFSYMAIATSFLGVTLGLFDYIADIFKWNDSVSGRTKTAALTFLPPLISC
                     LLFPTGFVTAIGYVGLAATVWTGIIPAMLLYRSRKKFGAGKTYKVYGGLWLMVWVFLF
                     GIVNIAAQVLSQMELVPVFKG"
     gene            3305..3868
                     /gene="gmhB"
                     /locus_tag="WIX18_001683"
     CDS             3305..3868
                     /gene="gmhB"
                     /locus_tag="WIX18_001683"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HEZ5238762.1"
                     /translation="MKLIILDRDGVINQDRDDFVKSVDEWIPVEGSMDAVAFLTQAGY
                     TVAVATNQSGIGRKYFTVQNLTEMHAKMHRLVRQAGGEINGIWFCPHTDADNCNCRKP
                     KPGMIEDIIGRFNAQASETWLVGDSLRDLQAIDAVGGKPALVLTGKGKKTLSQHGHEL
                     PEHTQVFDTLLDFSQYIMQENAAPQAD"
     gene            3898..4641
                     /locus_tag="WIX18_001684"
     CDS             3898..4641
                     /locus_tag="WIX18_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEZ5238763.1"
                     /translation="MLIIRNLIYWLILCSTLIFLFPFMLLASPFRDGAHKMARVWVKI
                     LNLSLKHIVGLKYRIIGAENIPDRPAVICAKHQSGWETLALQDIFPPQVYVAKRELFK
                     IPFFGWGLKLVKTIGIDRNNRREANEQLIKQGLARKNEGYWITIFPEGTRLAPGKRGK
                     YKLGGARMAKMFEMDIVPVALNSGEFWPKNSFLKYPGEITVVICPTIPHASGSEAELM
                     EKCEHLIETQQPLISGAGPFAAKMPSETV"
     gene            4638..5327
                     /locus_tag="WIX18_001685"
     CDS             4638..5327
                     /locus_tag="WIX18_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEZ5238764.1"
                     /translation="MTSLIHTLSDGMELTIEIKRRAKKNLIIRPIGTHTVRISVPPCF
                     SVSALNRWLYENEAVLRRTLAKTPPQTAENRLPESILFHGRQLALTAHQDTQILLMPS
                     EIRVPEGAPEKQLALLQDFLERQAHSYLIPRLERHARTTQLFPASSSLTSAKTFWGVC
                     RKTTGIRLNRRLVGAPEYVADYVCIHELCHLAHPDHSPAFWELTRRFAPYTPEAKQWL
                     KIHGRELFALG"
     gene            5439..5624
                     /locus_tag="WIX18_001686"
     CDS             5439..5624
                     /locus_tag="WIX18_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238765.1"
                     /translation="MPEQARARPIQTAMTLCRRFGAGWRHTRRLPRFISHRSSETRNP
                     PGPTCGMKRLSWREVFY"
BASE COUNT         1371 a         1898 c         1382 g         1197 t
ORIGIN      
        1 aaaatactcg gctatcgtct cattttcgtt ttaatcagcc ataaaaatgc cgtctgaaac
       61 cctttcagac ggcatttctg tcaaacgccg gacgcactca acccaaactc aacagcaggt
      121 tgcggaacgc gttcgggtct ttgataaacg tcatctcgcc cgcctgcgga aaatgaaaat
      181 ccaacaggcg cgacacccaa aaacggatgc agcctgcacg ttgggcggtc gggaaatacg
      241 ccttttcttc ggcactcaag gggcgcacgc cctcataacc gccgataaac gcctttttca
      301 acgcctcatc caacttattg tccgccgtcc ttgcccaatc gttgaccgca atcgccaagt
      361 catacataaa attgccccgg caggcataat agaaatcgat gaaacccgat acctgaccgc
      421 cgtcaagcaa cacattgtct ttaaacagat cggcatggat gatgcccgaa ggcagatgat
      481 tgccgagatt gtccttcaac gcatcgattt cggaacacag cagtgcggca tcgtcttgcg
      541 acaggacggg cagcagccgg gcgcacgcct ccgtccacca cgcatcgtaa cgcgggtttt
      601 ccatttccaa agggaaatca gcggcggcaa ggtgcatttt ggccaacatc gcaccggtat
      661 ggaagcactg ctccgccgtc ggcagcgcag tatccgaacc tttcaggcag gcaaccaggc
      721 aggcaggctt gcccgccaaa acggaatcaa gccggccgtc tttgcgcgca accggcgcgg
      781 caaccgccac gcccttcata ctcaaatgcc ggttaagctc cagaaaaaac ggcagctctt
      841 cctgtttcaa cacttcaaac acggtcagca cataacgtcc cgaagtcgtc gtcagaaaat
      901 aattgctgtt ggtaatcccc tgcgcgatgc cctgcaggga aacaaattct cccaaatcgt
      961 aatcatccaa aaagccgcgc atttcatcat cggaaacact ggtataaaca gacatatcca
     1021 ttcacccgtt caaaacaatc aaacccgccg tcagaacgcc ggacggcagg caaacatata
     1081 attcacatcg gtcgaatcgc acagggcata agtttgcgac aacacatggt aagtcatacc
     1141 cttcgtatcc gccacatcca agcctgcctg acggcacatc cgcgccagct cggcaggcgc
     1201 gatgaatttt ttccagtcgt gcgtaccttt ggggacgaac ttcaacagat attccgccgc
     1261 cacaatcaga tgcaggtacg atttcgggtt tttattgatg gtggaaaaaa acaccatgcc
     1321 gtccggtttg accagcttgg cacaggcgcg aacgatggcg gcgggatcgg ggacgtgttc
     1381 catcatttcc atgcacgtta ccacatcgaa cgagtgcggt tccgcctcgg caaggtcttc
     1441 cacgcggata cattcgtatt cgatatcggc gacattgttc aaagccgcgt gcaggcgggc
     1501 ggtttccagc gactgctccg ccatgtcgat accctttaca aacgccgcgc cgcgccgcgc
     1561 catactttcc gccaagatgc cgccgccgca gcccacatcc aaaacccgtt tgccgcgcaa
     1621 atccgcgtgt ccgtcgatat aatccagccg cagcggattg atgtcgtgca aggttttgaa
     1681 ctcgcccgac ttgtcccacc atttgtcggc aatccggctg aatttggcga tttccccctc
     1741 atcgacatta tattttttgt cggacatttt ccctcccatc tgacgaaccg cccactccaa
     1801 aacccaagat tatactatgg aacgcaatgc cgtctgaaag ccttttcggg cggcgcggcg
     1861 caaatacctt acaaatcctt acactttacg gcataatggc ggctcgcttt ttctggcaga
     1921 aagacaaaat atgcccacca aaaccccttc actgttcggc ggcgcgatga ttatcgccgg
     1981 cacggtcatc ggcgcaggta tgctcgccaa cccgaccgcc acatccggcg tatggtttac
     2041 cggctcgctg gccgtgttgc tgtacacctg gttttccatg ctctccagcg gcctgatgat
     2101 tttggaagtc aacacccact acccccacgg cgcgagcttc gacaccatgg ttaaagacct
     2161 gctcggacgg agctggaaca tcatcaacgg catcgccgtc gccttcgttt tatacctgct
     2221 tacttacgct tatatcttcg tcggcggcga cctgaccgcc aaaggcttag gcagcgcggc
     2281 aggcggcaat gtttcactca ccgtcggaca actcgtcttc ttcggcattc tcgccttttg
     2341 cgtatgggca tccgcacgct tggtcgaccg attcaccagc gtcctcatcg gcggcatggt
     2401 attaaccttt atttgggcaa ccggcggcct gattgccgat gccaaactgc ccgtcctctt
     2461 cgacacccaa gcccctaccg gcaccaacta ctggatttat gtcgccaccg ccctgcccgt
     2521 ctgccttgcg tcattcggtt tccacggcaa cgtctccagc ctgctcaaat actttaaagg
     2581 cgacgcgccc aaagtggcta aatccatctg gacgggcaca ctgattgcgc tggtaattta
     2641 cgtcctctgg caaaccgcca tccaaggcaa cctgccgcgc aacgagttcg cccccgtgat
     2701 tgccgccgaa gggcaagtct ccgtcctgat tgaaaccctg tccaaattcg cccaaaccgg
     2761 caatatggac aaaatattgt ccctgttttc ctatatggcg atcgccacct cgtttttagg
     2821 cgtaacgctc ggactcttcg actacatcgc cgacatcttc aaatggaacg acagcgtgtc
     2881 cggccgcacc aaaaccgccg cgctgacctt cctgccgcct ctaatttcct gcctgctctt
     2941 ccccaccggc tttgttaccg ccatcggcta cgtcggcctg gcggcaaccg tctggacagg
     3001 catcatcccc gccatgctgc tctaccgttc gcgcaaaaaa ttcggcgcag gcaaaaccta
     3061 taaagtttac ggcggcttgt ggctgatggt ttgggtcttc cttttcggca tcgtcaacat
     3121 cgccgcacag gtattgagcc aaatggaact cgtccccgta tttaaaggat aaaggcaaaa
     3181 tgccgtctga agcccgccgg cggcttcaga cggcattgcc tcgttatcac gcggcacagg
     3241 cgcatcactg ccgatatttc agtataatgc cacccccgac ctgccccaat ccaaaggaaa
     3301 cgcgatgaaa ctcatcattc tcgaccgcga cggcgtcatc aatcaggacc gcgatgactt
     3361 cgtcaaatcc gttgacgagt ggatacctgt cgaaggcagc atggatgcgg tggcatttct
     3421 gacgcaggca ggctacaccg tcgccgttgc caccaaccaa tccggcatcg ggcgcaaata
     3481 ttttaccgtt caaaacctta ccgaaatgca cgccaaaatg caccgcctcg tccgtcaggc
     3541 aggcggcgaa atcaacggca tctggttctg cccgcacacc gatgccgaca actgcaactg
     3601 ccgcaagccc aaaccgggta tgattgaaga catcatcgga cgcttcaacg cccaagcctc
     3661 ggaaacctgg ctggtcggcg acagcctgcg cgatttgcag gcaatcgatg ccgtcggcgg
     3721 aaaacccgcg ctggttctga ccggaaaagg caaaaaaacg ctctcccaac acggacacga
     3781 attacccgaa cacacacagg ttttcgatac cttgctcgat ttctcacaat acatcatgca
     3841 ggaaaacgcc gcaccgcaag ccgactgaac ataccgcatt tccgacaagg caaaaccatg
     3901 ctcatcatcc gcaacctgat ttactggctg atactctgtt ccaccctgat tttcctcttt
     3961 ccctttatgc tgctcgcctc gcctttccgg gacggggcgc acaagatggc gcgggtctgg
     4021 gtcaaaatcc tcaacctctc gctcaaacac atcgtcgggc tcaaataccg catcatcggc
     4081 gcggaaaaca tccccgaccg ccccgccgtc atctgcgcca aacaccaaag cggctgggaa
     4141 acgcttgccc ttcaggacat ttttccgccg caggtttacg ttgccaaacg cgagctgttc
     4201 aaaatcccct ttttcggctg gggtttaaaa ctggtcaaaa ccataggcat agaccgcaac
     4261 aaccgccgcg aagccaacga acagctcata aaacaggggt tggcgcgcaa aaacgaaggc
     4321 tattggatta ccattttccc cgaaggcacg cgccttgcgc ccggaaaacg cggcaaatac
     4381 aaactcggcg gcgcgcgcat ggcgaaaatg tttgagatgg acatcgtccc cgtcgccctc
     4441 aacagcggcg aattttggcc gaaaaactcc tttctgaaat atccggggga aatcaccgtc
     4501 gtcatctgtc cgaccatccc gcacgcaagc ggcagcgaag ccgaattgat ggaaaaatgc
     4561 gaacacctca tcgaaacgca gcagccgctc atttccggcg caggcccgtt tgccgccaaa
     4621 atgccgtctg aaaccgtatg acctccctga tccacactct ttctgacggc atggaactga
     4681 ctatagaaat caagcgccgt gccaagaaaa acctgattat ccgccctatc ggcacacata
     4741 ccgtccgcat cagcgtccca ccctgcttct ccgtctccgc tctaaaccgc tggctgtatg
     4801 aaaacgaagc cgtcctgcgg cgaacactgg cgaaaacacc gccgcaaact gccgaaaacc
     4861 ggctgcccga atccatcctc ttccacggca gacaacttgc cctcaccgcc catcaagaca
     4921 cgcaaatcct gctgatgccg tctgaaatcc gcgttcccga aggcgcaccc gaaaaacagc
     4981 ttgcgctgct gcaggacttt ttggaacggc aggcgcacag ttacctgatt ccccgcctcg
     5041 aacgccacgc ccgcaccaca caactgttcc ccgcctcctc ctcgctgacc tctgccaaaa
     5101 ccttctgggg cgtgtgccgc aaaaccacag gcatacgcct caaccggcgg ctggtcggcg
     5161 caccggaata cgttgccgat tatgtctgca tacacgaact ctgccacctc gcccatcccg
     5221 accacagccc cgccttttgg gaactgaccc gccgcttcgc cccctacacg cccgaagcga
     5281 aacagtggct caaaatccac ggcagggaac ttttcgcctt aggctgacgc ggtcccgggc
     5341 cggcatccgc caattcagac ctcctcccaa acggacatcc ggaaagcagc atcacagccg
     5401 gcgacacata ccgctgccgc cgctttcaga cggcatccgt gccggaacag gcacgcgccc
     5461 gcccgattca aaccgcgatg acgctttgcc gccggttcgg ggcaggatgg cggcacacgc
     5521 gccgtctgcc gcgtttcatt tcacaccgct cttccgaaac ccgaaacccg cccggtccga
     5581 cgtgcggtat gaaacgctta agctggcgcg aagtctttta ctgatttgcc cgcgaaaatg
     5641 ccgtctgaaa ggttttcgga cggcattttt ttgcgtttcc caggatggcg gcggattcgt
     5701 aaaaggcggt cagggtggat tgtaggatgg gttgagacct gccgaatccg ccgcatctgc
     5761 caaatctacc gccgtcattc ctacgaaagt gggaatctag aacgcggggt taagaaaacc
     5821 tgcatcccgt cattcccacg aaagtggg
//
LOCUS       DAWITQ010000127         5794 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.127, whole genome shotgun sequence.
ACCESSION   DAWITQ010000127 DAWITQ010000000
VERSION     DAWITQ010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5794)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5794)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5794
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.127"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            117..1292
                     /locus_tag="WIX18_001687"
     CDS             117..1292
                     /locus_tag="WIX18_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS aminotransferase family
                     protein"
                     /protein_id="HEZ5238766.1"
                     /translation="MLNTFLSPWPCFTQEEADAVSKVLLSNKVNYWTGSECREFEKEF
                     AAFAGTRYAVALANGTLALDVALKAMGIGAGDDVIVTSRTFLASASCIVNAGANPVFA
                     DVDLNSQNISAETVKAALTPNTKAVIVVHLAGMPAEMDGIMTLAKEHDLWVIEDCAQA
                     HGAKYKGKSVGSIGHVGAWSFCQDKIMTTGGEGGMVTTNDKTLWEKMWSYKDHGKSYD
                     AVYHREHAPGFRWLHESFGTNWRMMEMQAAIGRIQLKRLPEWTACRQAHAAKLAESLG
                     KFKSIRLVEVADYIGHAQYKFYAFVKPEHLKDGWTRDRIVNELNARKVPCYQGSCSEV
                     YLEKSFDDTPWRPKERLKNAVELGDTSLMFLVHPTLTDDEIAFCKKHIEAVLAEATR"
     gene            1340..3250
                     /gene="pglD"
                     /locus_tag="WIX18_001688"
     CDS             1340..3250
                     /gene="pglD"
                     /locus_tag="WIX18_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent dehydratase PglD"
                     /protein_id="HEZ5238767.1"
                     /translation="MTLETLIALPRNIKKICFLIHDFLMIFIAFWFTQSLKADYSNEW
                     FDPANWQSFLLTAPLTIGLFVRMGLYRAVTRFISFRILSTALAGSLASAVLFFLNTLI
                     FEERLRLALPIVYFLLLFVSVTGSRMVLRGLLSEHPKKQMIPVIIYGAGRSGRQLLEA
                     VKQIREYSAVAFVDDNPKLWHTVIYDLAVYQPDAIAFLIERYGVEKILLAIPGATQEQ
                     RRRIISKLEAYPCEVLTIPGMKDLMDGKISIGTLKKISVSDLLGRDSVAPDNRLMSAD
                     IEGKTVMVTGAGGSIGSELCRQIIRRRPEKLLLFELSEFALYAVEKELRETCIQKRLD
                     TEILPFLGSVQNRTLLEHVMTAFSVATVYHAAAYKHVPMVEFNTVEGIRNNIFGTLEC
                     ALAATTSGVRTFVLISTDKAVRPTNTMGASKRMAELCLQALAAEPGQKTRFSMVRFGN
                     VLGSSGSVVPLFEKQIAEGGPLTLTHPDITRYFMTIPEAAQLVIQAGAMGTGGDVFVL
                     DMGESVKIIDLARQMITLSGLKPKTPEQPDGDIEILITGLRPGEKLYEELLIGDNVRK
                     TGHPRIMTADEAMLPWHELSVLLDRIRAACDRYDQQAIRTLLINAPTGFTPSDGICDL
                     LWVRETHRKNAV"
     gene            3306..4598
                     /locus_tag="WIX18_001689"
     CDS             3306..4598
                     /locus_tag="WIX18_001689"
                     /EC_number="2.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--pyruvate transaminase"
                     /protein_id="HEZ5238768.1"
                     /translation="MQFSAFGEKFTQHSGILQLMDDLGDALKSDKPVNMLGGGNPARI
                     PEIDRAFADIFSKLAAEHAVENIGNYSNPQGDAALIDALTAFLNREYGWNLTADNIAL
                     TNGSQNAFFYLFNLFGGKFKLSDGTSAEKAILLPLAPEYIGYADVHVEGQHFVSVKPK
                     IENVEHEGEAGFFKYRVDFDALENLPELKAGKIGAICCSRPTNPTGNVLTDGEMARLD
                     ALAREHGIPLIIDNAYGMPFPNIIYSDVTLNWHENIILCFSLSKVGLPGVRTGIIVAA
                     PEVVKAVSSLNAIVNLAPTRFGAAIAAPLLESGEMKRLADQVIRPFYRNQAQTAVSLL
                     KRELGAYPMKIHKPEGAIFLWLWFENLPVSSQTLYEMLKAEGTLIIPGEHFFVGIDTQ
                     DYPHAGECIRMSIAQDAQTLEKGIAAIGKTVRKLYDNV"
     gene            complement(4650..5486)
                     /locus_tag="WIX18_001690"
     CDS             complement(4650..5486)
                     /locus_tag="WIX18_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HEZ5238769.1"
                     /translation="MIDLHCHSTVSDGMLSPAEVVRLAHQNGCTLLALTDHDHTGGIA
                     EARAEADRLGLRLINGVEISVTWRGRTIHVVGLDFDEQDENLQNLLAQVRQGRLKRLE
                     AIAAKLEKKGIGGAYDGALALAANKEMVSRTHVAEFLIRAGHVKNKQQAFTKYLGDGK
                     SCAVRHEWATLEDCVSAVNGAGGMAVIAHPMRYDLSATAKRNLFEEFKNLGGAGIEVH
                     SGNCCKNDRLNYAFLAERFGMLASAGSDFHRLNDFSSGILGACPELPENCRPVWAHFS
                     RH"
BASE COUNT         1358 a         1775 c         1484 g         1177 t
ORIGIN      
        1 ccccgtacag accgattttg acaacacctg cggcgcgcgc ccgattcttc ggaacacgcc
       61 cccttcagac ggcatagggt cggaaatgcc gtctgaaaac cgacggacaa accatcatgc
      121 tgaacacttt cctttccccg tggccctgct tcacccaaga agaagccgat gccgtttcca
      181 aagtcctgct gtccaacaaa gtcaactact ggacgggcag cgaatgccgc gaatttgaaa
      241 aagaatttgc tgctttcgcc ggcacgcggt acgccgtcgc ccttgccaac ggcacgctgg
      301 cactcgatgt cgcgctcaaa gcaatgggca taggcgcggg cgacgatgtg attgttacct
      361 cgcgcacctt ccttgcctcc gcatcctgca tcgttaacgc aggcgcaaac cccgtgtttg
      421 ccgacgtgga tttgaacagc caaaacatca gcgcggaaac cgtcaaagcc gcgctgacgc
      481 cgaataccaa agccgtcatc gtcgtccacc ttgccggtat gcctgccgaa atggatggca
      541 ttatgacttt ggcaaaagaa catgatttgt gggtgattga agactgcgcc caagcgcacg
      601 gcgcaaaata caaaggcaaa tccgtcggct ctatcggaca cgtcggcgcg tggtcgttct
      661 gccaagacaa aatcatgacc accggcggcg aaggcggtat ggttacgacc aacgacaaaa
      721 ccctgtggga aaaaatgtgg tcgtacaaag accacggcaa aagctacgat gccgtgtacc
      781 accgcgaaca cgcgcccggt ttccgctggc tgcacgaaag tttcggcaca aactggcgta
      841 tgatggaaat gcaggcggca atcgggcgca tccagctcaa acgcctgccc gaatggactg
      901 cctgccgtca agcgcacgcc gccaagctgg cggaaagcct aggcaaattc aaaagtatcc
      961 gcttggttga agtcgccgac tacatcggac acgcgcaata taagttctac gccttcgtca
     1021 aacccgaaca cctcaaagac ggctggacgc gcgaccgcat cgtgaacgaa ctgaacgcac
     1081 gcaaagtccc ctgctatcaa ggcagctgct ccgaagtcta tttggaaaaa tctttcgacg
     1141 acacgccttg gcggccgaaa gagcgtttga aaaatgctgt cgaactgggc gacaccagcc
     1201 tgatgttctt ggtgcacccg acgctgaccg acgacgaaat cgcgttctgc aaaaaacaca
     1261 tcgaagccgt attggcagaa gccacacgat aacccttcag acggcatatg ccgcctgaaa
     1321 gcacataccg ccccacgata tgactctgga aaccctgatc gccctgccgc gcaacatcaa
     1381 gaaaatctgt ttcctcatac acgattttct gatgattttc attgcattct ggttcaccca
     1441 aagcctaaag gccgactact cgaacgaatg gttcgaccct gccaactggc agtctttcct
     1501 attgaccgcg ccgttgacca tcggcctgtt cgtcagaatg gggctctacc gtgccgttac
     1561 acgcttcatc agcttccgca tcctctccac cgcgctggca ggcagcctcg cctccgccgt
     1621 attgttcttc ctcaacacat tgatttttga agaaaggctg cgcctcgccc tgccgattgt
     1681 ctatttctta ctgctgtttg tttccgtgac cggctcgcgt atggttttgc gcggactgtt
     1741 gtccgaacac cccaaaaaac agatgatccc cgtcatcatt tacggcgcgg gacggtcggg
     1801 cagacaactg cttgaggccg tcaaacagat acgcgaatat tccgcggtcg cctttgtgga
     1861 cgacaacccc aagctttggc acaccgtcat ctacgacctt gccgtttacc agcccgatgc
     1921 catcgccttc ctcatcgaac gctacggcgt ggaaaaaatc ctgctcgcca tccccggcgc
     1981 gacccaggaa caacgccgcc gaatcatcag caaactggaa gcctatccct gcgaagtgtt
     2041 gaccattccc ggaatgaaag acctgatgga cgggaaaatc agcatcggca cgctcaaaaa
     2101 aatctccgtg tccgacctgc tcgggcgtga ttccgtcgcg cccgacaacc gcctcatgag
     2161 tgccgacatc gaaggcaaaa ccgtcatggt aaccggcgcg ggcggctcca tcggttcgga
     2221 actctgccgc cagattatcc gccgccgccc cgaaaagctg ctgctgtttg agttatccga
     2281 attcgccctg tacgccgtcg aaaaagaatt gcgcgaaacc tgcatccaaa aacgcctcga
     2341 caccgaaatc ctgccctttc tcggttcggt gcaaaaccgc acgctgctcg aacacgtcat
     2401 gaccgccttt tccgttgcga ccgtctatca cgccgctgcc tacaaacacg tccccatggt
     2461 cgaattcaac accgtcgaag gcatacgcaa caacattttc ggcacactcg agtgcgcgct
     2521 tgccgccacg acatcgggcg taagaacttt cgtcctcatc tccaccgaca aagccgtccg
     2581 ccccaccaac accatgggtg ccagcaaacg catggcggaa ctctgccttc aggcactcgc
     2641 cgccgaaccc ggacaaaaaa cccgcttcag catggtacgt ttcggcaatg ttttaggttc
     2701 gtccggctcc gttgtcccgc tgtttgaaaa acagattgca gaaggcggcc cgcttaccct
     2761 gacccacccc gacatcacac gttatttcat gaccataccc gaagccgccc aactcgtcat
     2821 acaggcaggc gcgatgggta cgggcggcga cgtattcgtc ctcgatatgg gcgaatccgt
     2881 caaaatcatc gaccttgccc gccaaatgat taccttaagc ggcctcaaac ccaaaacacc
     2941 cgaacaaccc gacggcgaca tcgaaatcct cattaccgga ctgcgtcccg gcgaaaaact
     3001 ctacgaagag ctgctcatcg gcgacaacgt ccgcaaaacc ggccatccgc gcattatgac
     3061 ggctgacgag gcgatgctgc cgtggcacga gctctctgtc ctgctcgacc gcatccgtgc
     3121 ggcctgcgac cgttacgacc agcaggcaat ccgcaccctg ctcatcaacg ccccgaccgg
     3181 ctttacccca agcgacggta tctgcgacct gctttgggta cgagaaacac acagaaaaaa
     3241 tgccgtctga accttcagac ggcataacgt acaaaccaac ctgcctgaca cacacggagt
     3301 ttgatatgca gttttcggca ttcggcgaaa aattcacgca acacagcggc atcctgcaac
     3361 tgatggacga cctcggcgac gcgctcaaaa gcgacaagcc cgtcaatatg ctcggcggag
     3421 gcaacccggc acgcattccg gaaatcgatc gggcgttcgc cgacatattc tccaaactgg
     3481 cggcggaaca cgccgtcgaa aacatcggca actactccaa tccccaaggc gatgccgcgc
     3541 tgattgacgc gctgaccgcc ttcctcaacc gcgaatacgg ctggaatttg accgccgaca
     3601 atatcgcgct gaccaacggt tcgcaaaacg cgtttttcta tttattcaac ctcttcggcg
     3661 gcaaattcaa gctttcagac ggcacatccg cagaaaaagc cattttgttg ccgctcgcgc
     3721 ccgaatacat cggctatgcc gacgtacatg tcgaagggca gcacttcgtt tctgtcaagc
     3781 ccaaaatcga aaacgtcgaa cacgaaggcg aagcaggctt cttcaaatac cgcgtggact
     3841 ttgacgcact ggaaaacctg cccgaactca aagcgggcaa aatcggcgcg atttgctgtt
     3901 cgcgcccgac caacccgacc ggcaatgtgt tgaccgacgg cgaaatggca cgtttggacg
     3961 ctttggcgcg tgaacacggg attccgctga ttatcgacaa cgcctacgga atgccgttcc
     4021 ccaacatcat ttacagcgac gtaacgctga attggcacga aaacatcatc ctctgcttca
     4081 gcctttccaa agtcggcctg ccgggcgttc gcaccggcat cattgtcgcc gcgcccgaag
     4141 tcgtcaaagc cgtcagcagc ctgaacgcga ttgtgaacct tgcccccacg cgcttcggcg
     4201 cggccatcgc cgccccgcta ctggaaagcg gcgagatgaa acggcttgcc gaccaagtca
     4261 tccggccgtt ttaccgcaat caggcgcaaa ccgccgtctc gctgctcaag cgcgagctgg
     4321 gcgcgtaccc gatgaaaatc cacaaacccg aaggcgcgat tttcctgtgg ctctggtttg
     4381 aaaacctacc cgtttcttcg caaaccctgt acgaaatgct caaagccgaa ggtacgctga
     4441 ttattccggg cgagcatttc ttcgtcggca tcgacacaca ggattacccg cacgcgggcg
     4501 agtgcatccg catgagcatc gcgcaggacg ctcaaacgct ggaaaaaggc attgccgcca
     4561 tcggtaaaac cgtccgaaaa ctgtacgaca acgtttaaac cgcaaaaaat gccgtctgaa
     4621 agcctttcag acggcatttt tatccgcatt caatgtcggg agaaatgcgc ccacaccggc
     4681 ctgcagtttt ccggcagttc gggacacgcg ccgaggatgc cgctgctgaa gtcgtttaaa
     4741 cggtggaagt cgctgcccgc actggcgagc atgccgaagc gttctgccaa aaatgcgtag
     4801 ttgaggcggt cgtttttgca gcagttgccg ctgtggactt cgatgcccgc gccgccgagg
     4861 tttttaaatt cttcaaacag attgcgcttg gcggtagcgg acaaatcata gcgcatcgga
     4921 tgggcgatga ctgccatgcc gcccgcgccg ttgacggcgg agacgcagtc ttccagcgtc
     4981 gcccattcgt gtcggacggc gcaggatttg ccgtcgccca agtatttggt gaacgcctgc
     5041 tgcttgtttt tgacatgtcc cgcccggatg aggaactcgg cgacgtgggt gcggctgacc
     5101 atttctttgt ttgccgccag cgcgagcgcg ccgtcgtatg cgccgccgat gcctttcttt
     5161 tcgagcttgg cggcgatggc ttcgaggcgt ttcagacggc cttgccgcac ttgcgccaac
     5221 aggttttgca ggttttcgtc ttgttcgtca aagtctaagc cgacaacgtg tatggtacgc
     5281 ccgcgccacg ttacggagat ttccacgccg ttaatcaggc gcaaaccgag cctgtcggct
     5341 tcggcacgcg cttcggcgat gccgccggtg tggtcatggt cggtcaacgc cagcagcgtg
     5401 cagccgtttt gatgcgcgag gcgcacgact tcggcggggg aaagcatacc gtcggaaacg
     5461 gtggaatggc agtgcaggtc tatcatgggg tgttatatgt gtggtgaatg aaggtcgggg
     5521 ggcaatattg tcgggcagtg tggcggcggc ggtcatttta aaaaacaggt gtatggcaaa
     5581 tgcaaagaaa aagtccctat accgtcattc ccgcgcaggc gggaatccag actttgattt
     5641 attggaaatg tttaaggtta accgctattt caaacttccg gattcccgcc tgcgcgggaa
     5701 tgacgatagg gatgttttca attttaatct actataaaag actgtctgaa aacgtggttt
     5761 tatagtgaat taaatttaaa ccggtacagc gttg
//
LOCUS       DAWITQ010000128         5789 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.128, whole genome shotgun sequence.
ACCESSION   DAWITQ010000128 DAWITQ010000000
VERSION     DAWITQ010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5789)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5789)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5789
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.128"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(245..352)
                     /locus_tag="WIX18_001691"
                     /pseudo
     CDS             complement(245..352)
                     /locus_tag="WIX18_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(398..1126)
                     /gene="pdxJ"
                     /locus_tag="WIX18_001692"
     CDS             complement(398..1126)
                     /gene="pdxJ"
                     /locus_tag="WIX18_001692"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEZ5238770.1"
                     /translation="MLLGVNIDHIATVRNARGTTYPSPVEAALVAETHGADLITMHLR
                     EDRRHIKDADVFAVKNAIRTRLNLEMALTEEMLENALKVMPEDVCIVPEKRQEITTEG
                     GLDVLAQQEKIAGFTKILTDAGIRVSLFIDADDRQIQAAYDVGAPVVELHTGAYADAR
                     SHAEQLKQFERLQNGAHFAGDLGLVVNAGHGLTIHNVTPIAQILAIRELNIGHSLIAQ
                     ALFLGLPEAVRQMKEAMFRARLLP"
     gene            complement(1150..1941)
                     /gene="recO"
                     /locus_tag="WIX18_001693"
     CDS             complement(1150..1941)
                     /gene="recO"
                     /locus_tag="WIX18_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HEZ5238771.1"
                     /translation="MSEHRVNHEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSAR
                     KRQSELRGVLVSFVPVSASWYGSQELKTLHRAEWVGGWRQPQGRALFSGLYVNELVLK
                     LTAREDPMPELYDALAKVMEAVCREANHIADLRRFEWKLLNALGVAPDLHADGTGGDI
                     LADKTYRLMPEEAVMPVCRDTDALSHEAGAIVEGQSLIDLREGSFRTAESLQQALKIT
                     RLFIRHLLPEGLKSRQVLEQIRQFDRKETARETVPTSDGTASNAV"
     gene            complement(1975..3102)
                     /gene="pheA"
                     /locus_tag="WIX18_001694"
     CDS             complement(1975..3102)
                     /gene="pheA"
                     /locus_tag="WIX18_001694"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HEZ5238772.1"
                     /translation="MLECTANHRSGEIMSQTIDELLLPHRNAIDTIDAEILRLLNERA
                     QHAHAIGELKGTGAVYRPEREVAVLRRIQDLNKGPLPDESVARLFREVMSECLAVERP
                     LTIAYLGPQGTFTQQAAIKHFGHAAHTMACPTIDNCFKQVETRQADYLVAPVENSTEG
                     SVGRTLDLLAVTALQACGEVVLRIHHNLLRKNNGSTEGIAKVFSHAQALAQCNDWLGR
                     HLPNAERIAVSSNAEAARLVAESDDGTVAAIAGRTAAEIYGLDMVAECIEDEPNNTTR
                     FLVMGHHETGASGSDKTSLAVSAPNRAGAVASLLQPLTESGISMTKFESRPSKSVLWE
                     YLFFIDIEGHRRDAQIQTALERLGERASFVKVIGSYPTAVL"
     gene            complement(3141..4373)
                     /locus_tag="WIX18_001695"
     CDS             complement(3141..4373)
                     /locus_tag="WIX18_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HEZ5238773.1"
                     /translation="MPSAHYPEMSEKLMAVLMAMLVTLMPFSIDAYLPAIPEMAQSLN
                     ADVHRIEQSLSLFMFGTAFGQVVGGSVSDIKGRKPVALTGLAVYCLAVAAIVFASSAE
                     QLLNLRVVQAFGAGMTVVIVGAMVRDYYSGRKAAQMFALIGIILMVVPLVAPMVGALL
                     QGLGGWQAIFVFLAAYSLVLLGLVQYFLPKPAVGGKIGRDVFGLVAGRFKRVLKTRAA
                     MGYLFFQAFSFGSMFAFLTESSFVYQQLYRVTPHQYAWAFALNIITMMFFNRVTAWRL
                     KTGVHPQSILLWGIVVQFAANLSQLAAVLFFGLPPFWLLVACVMFSVGTQGLVGANTQ
                     ACFMSYFKEEGGSANAVLGVFQSLIGAGVGMAATFLHDGSATVMAATMTASTSCGIAL
                     LWLCSHRAWKENEQSEYL"
     gene            complement(4892..5746)
                     /locus_tag="WIX18_001696"
     CDS             complement(4892..5746)
                     /locus_tag="WIX18_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEZ5238774.1"
                     /translation="MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALP
                     ACRRHVGKIPREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFV
                     GHFFFNDKARAYHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMR
                     PTQRLIARIGAPAFTSVSIAAASLMCLPFSLALAQSYTVDWNVGMVLSLLYLGLGCGW
                     YAYWLWNKGMSRVPANVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLV
                     AGRLSHQK"
BASE COUNT         1347 a         1664 c         1581 g         1197 t
ORIGIN      
        1 ctatattaca taatcatcgc ctcaatattt aatatcccaa aatatagatt taaaaccatc
       61 gcctttgtgg tttgtcagca ttcctaattg agatagaaag tcaaataatt tcttgtttct
      121 ccggctgcca tcaagatggt ttagattaag accgcgaaca atacaataac caatacgctg
      181 tactgtattg tgaatttctt ctatcaaact attattgttt gcagataaaa tatacttttg
      241 attcatatag tgaattaaat ttaaaccagt acggcgttgg cttgccttgc cgtactattt
      301 gtactgtctg cggcttcgcc gccttgtcct gatttaaatt taatccacta taacatatcc
      361 ctgtcgtgaa atgctgtctg aaagggtttg cctgccctta cggcagcagc cttgccctga
      421 acatcgcctc cttcatctgg cgcacggctt cgggcagtcc gaggaagagg gcttgggcaa
      481 tcagcgaatg cccgatgttc agttcgcgga tggcgaggat ttgggcgatg ggggtaacgt
      541 tgtgtatggt cagtccgtgt ccggcgttga cgaccaagcc caaatcgccg gcaaaatgcg
      601 cgccgttttg cagacgctcg aattgcttga gttgttcggc gtggctgcgc gcgtcggcat
      661 acgcgccggt gtgcagctcg acaacgggcg cgccgacatc ataggcggct tggatttgcc
      721 tgtcgtcggc atcgataaag agagagactc ggatgcctgc gtcggtcagg attttggtga
      781 acccggcgat tttttcctgt tgcgccaata cgtccaagcc gccttcggtc gtgatttcct
      841 gacgtttttc aggcacgatg cacacgtctt ccggcatcac tttaagcgcg ttttcgagca
      901 tttcttccgt caacgccatt tcaaggttca ggcgcgtgcg gatggcgttt ttgacggcaa
      961 acacatccgc gtctttgatg tggcggcggt cttcgcgcag gtgcatggta atcaaatccg
     1021 caccgtgcgt ttcggcaacc agtgccgcct ccacggggct gggataagtc gtgccgcgcg
     1081 cattgcggac ggtagcgatg tggtcgatgt tgacacctaa aagcataatc tttcctttta
     1141 tttctgcctt cagacggcat ttgaagccgt gccgtccgaa gtcgggacgg tttcccgggc
     1201 ggtttctttg cggtcaaact gccgtatctg ttccaacacc tgccgcgatt tcagcccctc
     1261 gggcaacagg tggcggataa aaagccgtgt gattttcaat gcctgttgca ggctttcggc
     1321 ggtgcggaaa ctgccttcgc gcaaatcgat caggctttgc ccttcgacaa ttgcgccggc
     1381 ctcgtgcgaa agcgcgtccg tgtcccggca tacgggcatg accgcctctt cgggcatcag
     1441 ccggtaggtt ttatccgcca aaatatcgcc gcccgtgccg tcggcgtgca aatcgggggc
     1501 aacgcccaag gcattgagca gcttccactc gaagcggcgc aaatcggcaa tgtggttggc
     1561 ttcacgacac accgcctcca tcacttttgc caacgcgtcg tacagttcgg gcatcgggtc
     1621 ttcgcgcgcg gtcagtttca acaccagttc gttcacatac agaccgctga acaacgccct
     1681 gccctgcggc tgccgccatc cgccgaccca ttcggcacgg tgcagggttt tgagttcctg
     1741 actgccgtac cacgacgcac tgacgggcac gaaggaaacc agcacgccgc gcaattcgct
     1801 ctgccgcttg cgcgcgcttc ttgccaaaag tgccacacgc ccgtaacggc ggctgaacgc
     1861 ttcgacccgc aggctgcttt cgcgccatgg cgaggaagcc aacaggaaga caggttcgtg
     1921 gttgactcgg tgttcggaca tcatgcctga aatgccgtct gaacgctgct gccgctacaa
     1981 aacggcggtc gggtacgaac cgatgacttt gacgaacgaa gcgcgttcgc ccaagcgttc
     2041 caatgccgtc tgaatctgcg cgtcccggcg gtgtccttcg atgtcgatga agaacaggta
     2101 ttcccacaaa acggatttac tcggacggct ctcaaacttg gtcatggaaa tacccgactc
     2161 agtcagcggt tgcagcagcg aggcaaccgc gcctgcccgg ttgggcgcgg aaacggccag
     2221 cgaagtcttg tcgctgccgc ttgcaccggt ttcgtgatgt cccatcacca agaagcgcgt
     2281 ggtgttgttc ggttcgtctt cgatgcactc ggcaaccata tcgagtccgt agatttccgc
     2341 cgccgtgcgt ccggcgatgg cggcaaccgt accgtcgtcc gattcggcaa ccagccttgc
     2401 ggcttcggca ttgctggaca cggcaatccg ttcggcgttg ggcaggtgtc tgcccaacca
     2461 gtcgttgcac tgcgccaacg cctgcgcgtg ggaaaagact ttggcaatgc cttcggtgct
     2521 gccgttgttt ttacgcaaaa ggttgtggtg gatgcgcaaa acgacttcgc cgcacgcctg
     2581 caacgcggta acggcaagca aatccaacgt gcgcccgacc gagccttcgg tcgagttttc
     2641 cacgggcgcg accagataat ccgcctgacg ggtttcaacc tgcttgaagc agttgtctat
     2701 ggtcggacac gccatggtgt gcgcggcgtg tccgaaatgc ttgatcgccg cctgctgggt
     2761 aaacgtgccc tgcggcccca gataggcgat ggtcagcggg cgttcgacgg cgaggcactc
     2821 gctcatcact tcccgaaaca ggcgtgctac cgattcgtcg ggcagcgggc ctttgttcaa
     2881 atcctgaatg cggcgcaaca cggcgacttc gcgttcggga cggtacactg cgcccgtgcc
     2941 tttcagctcg ccgatggcgt gggcgtgttg cgcacgttcg ttgagcaggc gcaggatttc
     3001 ggcatcgatg gtgtcgatgg cgttgcggtg gggaaggagg agttcgtcga tagtttggga
     3061 cataatttcg cctgaacggt ggtttgccgt gcattctaac atcaaatgcc gtctgaaacg
     3121 gtttcagacg gcatttgatg ttaaaggtat tcgctctgtt cgttttcttt ccacgcacga
     3181 tgtgagcaga gccacagaag cgcaatgccg caagaggtgg acgcggtcat cgttgccgcc
     3241 atcacggttg ccgaaccgtc gtgcaagaag gtcgccgcca tacccacccc cgcgccgatt
     3301 aaagattgga atacacccaa tacggcgttt gcgctgccgc cctcttcttt gaaataagac
     3361 ataaagcatg cctgcgtgtt cgcaccgacc aagccctgcg taccgacgga aaacatcacg
     3421 cacgcgacca gcagccaaaa cgggggcaac ccgaaaaaca gcacggcggc gagttgggac
     3481 aggttggcgg caaactggac gacaatcccc cacagcagga tgctttgcgg atgcacgccg
     3541 gttttgagcc gccacgcggt aacgcggttg aaaaacatca tcgtgatgat gttgagtgca
     3601 aacgcccaag cgtattgatg aggcgtaaca cggtagagct gctggtacac gaaggaagat
     3661 tcggtcagaa aggcgaacat cgaaccgaag ctgaatgcct gaaaaaacag ataacccatc
     3721 gcggcacggg ttttcaatac gcgtttgaac cgcccagcca ccagcccgaa cacatcccgt
     3781 ccgattttgc cgccgacggc aggcttgggc aggaaatact gtaccaaacc gagcagcacc
     3841 agcgaatacg ccgccagaaa aacaaaaatc gcctgccagc cacccaagcc ctgcaacaat
     3901 gcgccgacca tgggtgcgac cagcggcaca accatcaaaa tgatgccgat aagggcaaac
     3961 atctgggcgg ctttgcgtcc ggaataataa tcgcgcacca ttgcgccgac gatgaccaca
     4021 gtcatgcccg caccgaatgc ctgcacgacg cgcaggttga ggagctgttc ggcactcgaa
     4081 gcaaatacga tggcggcaac ggcaaggcag tagacggcca gtccggtcag cgcgacgggt
     4141 ttgcgccctt tgatgtcgga caccgaaccg ccgaccacct gtccgaacgc cgtgccgaac
     4201 ataaacaaac tcaggctctg ttcgatgcgg tggacatccg cgttcagcga ctgcgccatt
     4261 tcgggaatcg cgggcaggta ggcatcgatg gaaaacggca tcagcgtaac cagcatcgcc
     4321 atcaaaaccg ccatcagttt ttcgctcatt tcaggataat gggcagaagg cataaattct
     4381 cgtccgattc gcaaacaaac cgcccggcgg cggaaaacac aatacgcgga aacggaaaat
     4441 tttaacacac cggcacaaac aggcggcaac aaaagccccg gcaaaaccgg acgaaccgga
     4501 acgatatagt ggattaacaa aaaccagtac agcgttgcct tgccttagct caaagagaac
     4561 gattctctaa ggtgcttaag caccaagtga atcggttccg tactatctgt actgtctgcg
     4621 gctcgccgcc ttgtcctgat ttttgttaat ccactataaa atcccgtcat tcccgcgcag
     4681 gcgggaatct ggacatccaa cgctgcagca atttgtcgga aataaccgaa actcaaaaaa
     4741 ccggatgccc gcctgcgcgg gaatgacgat gcaaagatgg tcgttatttc ggataaatat
     4801 ccgtcttttc gttccggata cccgctttcg caggaatgga gatggaaaga tttcagccta
     4861 ttcggcaatc atcaaatacc gcttcccaac tttatttttg atgcgacagc cggccggcaa
     4921 ccaaggtggc ggcgatgacg acaaacacgc ccaaggcgga cacgggcgac aggtgttcgc
     4981 ccaaaatcaa aaccgccagc agcacgccga cgacgggttc gagcgaaatc aacagtcccg
     5041 aaacgttggc aggaacacgg ctcatcccct tgttccacag ccaataggcg taccagccgc
     5101 accccaagcc caaatacagc agcgacaata ccatcccgac gttccagtcc acggtataac
     5161 tttgcgccaa agcaagcgaa aacggcaggc acatcaacga tgcggcggca atggaaacag
     5221 atgtgaatgc cggtgcgccg atgcgtgcaa tcagcctttg cgtcggacgc atagcggcac
     5281 aaaagcccgc gcccgccaac aacaccagca ggcagccgaa ccagccgact tcgccgccct
     5341 cttccgcacc gcccgccatc agcagcgcga caccggcaaa tgccgccgcg ccgcatatcc
     5401 agtggtaggc acgcgctttg tcgttgaaga aaaagtgtcc gacaaacacc atcagcagtg
     5461 gctcgagtcc gacaatgacc gatgcgctgg cggcggaagt gtatttcaac ccgacaaact
     5521 gaagcagcag ggtcagcaca tagttgacga acgacacaat cagcaacggc ttccattcct
     5581 cacgcggaat cttgccgaca tgacggcggc aggcgggcag tgcaggcagc gcagcaatca
     5641 gcaggcgcac gccgaccatc aatgcgggat cgatgccgcc atagacatat ttggcggcaa
     5701 taaacgagct gctccagata atcagggcaa ggatttggta aaacatagtg agtgataaag
     5761 tcagatggtc atacaaaagt atagcggat
//
LOCUS       DAWITQ010000129         5754 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.129, whole genome shotgun sequence.
ACCESSION   DAWITQ010000129 DAWITQ010000000
VERSION     DAWITQ010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5754)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5754)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5754
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.129"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..249)
                     /locus_tag="WIX18_001697"
     rRNA            complement(<1..249)
                     /locus_tag="WIX18_001697"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            complement(623..1039)
                     /gene="dksA"
                     /locus_tag="WIX18_001698"
     CDS             complement(623..1039)
                     /gene="dksA"
                     /locus_tag="WIX18_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HEZ5238775.1"
                     /translation="MAKLTEQDILNWNGPEDDYMNDEHLAFFRELLVKMQDELIENAS
                     ATTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYGFCA
                     DTGEPIGLKRLLARPTATLSVESQERRERMKKQFAD"
     gene            complement(1186..1977)
                     /locus_tag="WIX18_001699"
     CDS             complement(1186..1977)
                     /locus_tag="WIX18_001699"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HEZ5238776.1"
                     /translation="MNVYFLGGGNMAAAIAGGLVKQGGYRIYIANRGAEKRERLEKEL
                     GVETSATLPELHSDDVLILAVKPQDMEAACKNIRTNGALVLSVAAGLSVDTLSRYLGG
                     NRRIVRVMPNTPGKIGLGVSGMFAEAEVSETDRRIADRIMKSVGLTVWLEDEAQMHSI
                     TGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFKGAVALAEQTGEDFEKLQ
                     KNVTSKGGTTHEAVEAFRRHRVAEAISEGVCACVRRSQEMERQYQ"
     gene            complement(2026..2433)
                     /locus_tag="WIX18_001700"
     CDS             complement(2026..2433)
                     /locus_tag="WIX18_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HEZ5238777.1"
                     /translation="MEIRAIKYTAMAALLAFTVAGCQLAGWYECSSLSGWCKLRKPAA
                     IDFWDIGGESPPSLEDYEIPLLDGNRSVRANEYESAQQSYFYRKIGKFEACGLDWRTR
                     DGKPLIETFKQEGFDCLKKQGLRRNGLSERVRW"
     gene            complement(2433..3119)
                     /locus_tag="WIX18_001701"
     CDS             complement(2433..3119)
                     /locus_tag="WIX18_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HEZ5238778.1"
                     /translation="MTVLQERYCEVSDRIGKLVLQAGRDPHSVSLIAVGKTFPSDGIR
                     EVYAAGQRDFGENYIQEWYGKTEELADLTDIVWHVIGDVQSNKTKFVAERAHWVHTIC
                     RLKTAVRLSGQRPSSMPPLQVCIEVNIAGEAAKHGVAPEEAVVLAVEVAKLPNIVVRG
                     LMCVAKAGGSEAELKTQFQTMQKLLADLNTAGVKADVLSMGMSDDMPAAIECGATHVR
                     IGSAIFGKRG"
     gene            3239..4282
                     /locus_tag="WIX18_001702"
     CDS             3239..4282
                     /locus_tag="WIX18_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HEZ5238779.1"
                     /translation="MQITDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSA
                     EEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVARFRVNAFNIGRGPAAVFRTIPST
                     VLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
                     PIEFVHQSKKSLINQRELHQHTLSFANALRSALREDPDVILVGEMRDPETIGLALTAA
                     ETGHLVFGTLHTTGAAKTVDRIVDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNG
                     RVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQSLQSLVRQGLIAPEV
                     ARRRAQNSESMSF"
     gene            4445..5671
                     /locus_tag="WIX18_001703"
     CDS             4445..5671
                     /locus_tag="WIX18_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEZ5238780.1"
                     /translation="MNTDNLHDILDEMVQVYSQKKQSRSETPAEIGAHFHPLLDRLCE
                     TAEAQNASDILISKGFPPSLKINSALTPQPQKALTGEETAAIAASTMNAEQSEIFRRD
                     GEINYSVQSRSGTRYRANAYHSQGSAGLVLRRINHVIPQMQELGLPEKLKDLAVAPRG
                     LLIIVGPTGSGKSTTMATMLEHRNKTLPSHIVTIEDPIEFIYKPRRCIFTQREIGVDT
                     INWQTAVQNAMRQSPDVVCIGEVRSRESMEYAMQLAQTGHLCIFTLHANTAPQSLERI
                     LNFYPKEQHNQILIDIALNLTGIICQRLALKQDKTGRTAVVDLLINTPAIQDFILKGD
                     LMNISKIMETAKTDGMQTMDQNLFELYRHGIISYEEALRQSVSANNLRLHIQLHKEGK
                     TPELLYDRVNGLNLIS"
BASE COUNT         1433 a         1764 c         1267 g         1290 t
ORIGIN      
        1 agctaatcag atatcggccg ctcgaatagc gcaaggcccg aaggtcccct gctttctctc
       61 tcaagacgta tgcggtatta gctgatcttt cgatcagtta tcccccacta ctcggtacgt
      121 tccgatatgt tactcacccg ttcgccactc gccacccaag aagcaagctt ctctgtgctg
      181 ccgtccgact tgcatgtgta aagcatgccg ccagcgttca atctgagcca ggatcaaact
      241 cttatgttca atctctaact ttttaacttc tggtctgctt caaagaaacc gacaggacaa
      301 tgttcaaaac attatcttgt ctgtctttca aacagtgtga gactcaaggc actcacactt
      361 atcggtaatc tgttttgtta aagagcgttt gaactgcttc atcaccgccg cttcgtcagc
      421 agcgaagaaa cgaactatac gcttgaagac gtatacggtc aatacttcat cttgcttttt
      481 ttaattattt tctccatctc gttgtctgat aaggtttttt atttcgccac aaaccacatc
      541 cgactcgaaa tttacctgcc gccatcttaa tctgcttccc tttttttctg tcatatggtt
      601 tgaaaataac caaaaggcaa atttagtcgg caaactgttt tttcatcctc tctcggcgtt
      661 cttgggactc aacagataaa gtggctgtcg ggcgtgccag cagccgcttc agaccgatag
      721 gctctcccgt atcggcacag aatccataat ccccttcatc aatattgcgg atggtcgcct
      781 gtattttact gagaagtttt cgttcccgat cgcgggtacg gagttccaat gcgtactctt
      841 cttcctgtgt ggcacggtcg gcaggatcgg gggctgattc gtgttcttgg agatgccctg
      901 tcgtagcgga agcattttcg atgagttcgt cttgcatttt taccagcaat tcgcggaaaa
      961 aagccaaatg ctcgtcattc atataatcgt cttccggccc gttccaattc aaaatatctt
     1021 gttctgtcag ctttgccata atgtatatcc tctcggttca ccgaaaaaaa caaagcacca
     1081 caaagtggct ttattccttt gatttttata aggcttattg cctaaggcgt ttttgaaaac
     1141 gcgcatcata acacgttttg gattggtttt tttattttct ttacattatt gatattgccg
     1201 ttccatttcc tgcgaacggc gcacacaggc acaaacgccc tcacttatgg cttcggcgac
     1261 acgatgccgc ctgaaggctt ccacggcttc gtgggttgtc ccgccttttg acgttacatt
     1321 tttttgaagc ttctcgaaat cttcacccgt ctgctcggca agggcaaccg ctcctttaaa
     1381 cgttgccaga ctgagcgcgc gtgcttctgc catatcaaac ccttgtcgga tggcggcatt
     1441 ttgcaatgcg tccagcagat aaaacacata tgccggcccg ctgccgctga taccggtaat
     1501 gctgtgcatt tgcgcttcat cttccaacca aacggtcaaa ccgactgatt tcatgattcg
     1561 atcggcaatc ctgcggtctg tttccgatac ttccgcttcg gcaaacatac cggatacgcc
     1621 cagcccgatt tttccgggtg tattcggcat aacccggaca atgcggcggt ttcccccgag
     1681 gtaacggctg agcgtatcaa ccgacaatcc agctgcaaca gaaagcacca atgcgccgtt
     1741 ggtgcggata tttttgcacg cggcttccat atcctgcggt ttgacggcaa ggattaaaac
     1801 atcgtcggaa tgaagctccg gcagggttgc cgaagtttcg acccccaact ctttttccaa
     1861 acgttcgcgt ttttccgcac cccgattggc tatatagatg cggtaaccgc cttgtttgac
     1921 caatccgcct gcgatggcag ccgccatatt gccgccgccg agaaaataaa cattcattat
     1981 ttctacccta ttcaaaatta ccttactaaa ttcattccca attttttacc atcggacacg
     2041 ctcggacaga ccgttgcgcc gcaacccctg ctttttcaaa caatcaaaac cttcctgttt
     2101 gaacgtctca atcaaaggtt tgccgtcacg cgtacgccaa tccaacccgc aggcttcaaa
     2161 cttccctatt ttcctgtaaa agtaagattg ttgtgcggat tcatattcgt ttgccctgac
     2221 ggaacgattg ccgtctaaaa gcggtatctc gtagtcctct aaagacggcg gactctcgcc
     2281 gccaatgtcc caaaaatcga tggcagccgg ttttctcagc ttacaccagc cggacaggga
     2341 cgaacactca taccaacccg ccaactggca gcctgcaacc gtaaatgcaa gcaacgcagc
     2401 cattgccgta tattttattg cccgaatttc catcagcccc ttttcccgaa aatcgcgctg
     2461 ccgatacgga cgtgtgtcgc accgcactca atggcggcag gcatatcgtc cgacatcccc
     2521 atagacagca cgtccgcctt aacgccagcc gtattgaggt cggcaagcaa cttttgcatg
     2581 gtctgaaact gggttttcaa ttctgcctcg ctgccgccgg ctttggcaac acacatcagt
     2641 ccgcgtacga cgatattcgg caacttcgcc acttcgaccg caagcacgac cgcttcttcg
     2701 ggcgcgacac cgtgtttcgc cgcctcgccc gcaatgttca cctcgataca cacctgcaaa
     2761 ggcggcattg aggaaggacg ttgcccgctc agccggacgg cggtctttag acggcatatg
     2821 gtatgcaccc aatgcgcgcg ttcggcgaca aacttggttt tgttggactg cacatcgccg
     2881 atgacgtgcc acacgatgtc ggtcaaatcc gccaactctt ccgttttgcc gtaccactcc
     2941 tgaatatagt tctcgccgaa atcacgctgt ccggcggcgt aaacttcgcg gatgccgtct
     3001 gaagggaaag tcttaccgac ggcaatcagg ctgacggaat gcggatccct gcccgcctgc
     3061 agaaccaatt ttccgatacg gtcggacacc tcacaataac gttcttgcaa caccgtcata
     3121 gattatcccc taattaaaaa tgattaaaca gttgaaaccc ctccagtcag ggcggtacaa
     3181 tcaaggttgt tagaaccatt ccaaccaatc gaaacattat actaaacaga gccgcattat
     3241 gcagattacc gacttactcg ccttcggcgc taaaaacaaa gcatccgacc ttcacctgag
     3301 ttcgggcata tcccctatga ttcgggttca cggcgatatg cggcgcatca accttcccga
     3361 aatgagcgcg gaagaggtcg gtaatatggt aacttcggtg atgaacgacc accagcggaa
     3421 aatctaccag caaaacttgg aagtcgactt ctcgttcgaa ctgcccaacg tcgcccgatt
     3481 ccgcgtcaac gccttcaaca tcggccgcgg tcccgccgcc gtattccgca ccattcccag
     3541 caccgtctta tcgctggaag aattgaaagc cccgagcatt ttccaaaaaa tcgcagaatc
     3601 gccgcgcggc atggttttgg ttaccggccc taccggttcg ggcaaatcga ccacgcttgc
     3661 cgcaatgatc aactacatca acgaaaccca gccggcacac atcctgacca tcgaagaccc
     3721 gatcgaattc gtccaccaaa gcaaaaaatc cctgattaac cagcgcgagc tgcaccagca
     3781 caccctcagc ttcgccaacg cgctgcgttc cgcattgcgc gaagaccccg acgttatcct
     3841 tgtcggcgag atgcgcgacc cagaaaccat cggcttggcg ctgaccgccg ccgaaaccgg
     3901 acacttggtt ttcggcacgc tgcacacgac cggcgcagca aaaaccgtcg accgtatcgt
     3961 ggacgtattc ccggcgggag aaaaagaaat ggtgcgctct atgctgtccg aatcgctgac
     4021 cgccgtcatc tcccaaaacc tgctgaaaac gcacgacggc aacggccgtg tcgcctcgca
     4081 cgaaatcctg attgccaacc ccgccgtccg caacctcatc cgcgaaaaca aaatcacgca
     4141 gattaactcc gtcctgcaaa ccgggcaggc gagcggtatg cagacaatgg accaatcgct
     4201 gcaatcgctg gtgcgccaag ggctgatcgc accggaagtc gcacgcagac gcgcgcaaaa
     4261 cagcgaaagt atgagtttct gacacacaac cgccttccgg ccataccggc gggaaaacaa
     4321 ggcgcaaaca cgcgaggcgg gacgcagcat cccgcccggc tacctttccg aacaagaagc
     4381 gtccgccttc ctgttgaaac ctgccgccgc aaactgcaag gcttaaaccg aaaagaagct
     4441 aacgatgaat accgataacc tgcacgacat cttggacgaa atggttcaag tgtattctca
     4501 aaaaaaacaa agccgatccg aaaccccggc cgaaatcggc gcacacttcc acccgctgct
     4561 cgaccgcctg tgcgaaaccg cagaagcaca aaacgcgtcc gacatcctta tcagcaaagg
     4621 attcccgccc tcgttgaaaa tcaacagcgc attaaccccg cagccgcaaa aggcgctgac
     4681 aggcgaggaa accgccgcca tcgccgcatc gacgatgaac gccgaacaat cggaaatatt
     4741 ccggcgcgac ggcgaaatca actactccgt ccagtcgcgc agcggcacgc gctaccgcgc
     4801 caacgcctac cacagccaag gcagcgcagg tttggttttg cggcgcatca accacgtcat
     4861 cccgcaaatg caggaattgg gcctgcccga aaaactcaaa gacctcgccg tcgcaccgcg
     4921 cgggctgctg attatcgtcg ggcctaccgg ttcgggcaaa tccaccacga tggcgactat
     4981 gctcgaacac cgcaacaaaa ccctgcccag ccatatcgtt accatcgaag acccgattga
     5041 gtttatctac aaaccgcgcc gctgcatctt tacccagcgc gaaatcggcg tcgacaccat
     5101 aaactggcag acggcggtac aaaacgctat gcgccaatcc cccgacgtgg tctgcatcgg
     5161 cgaagtccgc agcagggaaa gtatggaata cgcgatgcag ctcgcccaaa ccggccacct
     5221 gtgcattttt acgctccacg ccaacaccgc gccgcagtcg ctcgaacgca tactcaactt
     5281 ctaccccaaa gaacagcaca accaaatact gatcgacatc gccctcaacc tgaccggcat
     5341 catctgccaa cgcctcgccc tcaaacaaga caaaacgggc aggacggcgg ttgtcgactt
     5401 gctcatcaac acgcccgcca tccaagactt catcctgaag ggcgacctga tgaacatcag
     5461 taaaatcatg gaaaccgcca aaaccgacgg aatgcagacg atggatcaaa accttttcga
     5521 actgtaccgt cacggcatca tcagttacga agaagccctg cgccagtccg tttccgccaa
     5581 caacctgcga ttgcacatcc aactgcacaa agaaggcaaa acgcccgaac tcctttacga
     5641 cagggtcaac ggtctcaacc tcatttcctg atccgcaaaa cccaatgccg tctgaaaacc
     5701 gcatccccgt tttcagacgg catgatttta tccgccccat tcatgtgcta cact
//
LOCUS       DAWITQ010000130         5691 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.130, whole genome shotgun sequence.
ACCESSION   DAWITQ010000130 DAWITQ010000000
VERSION     DAWITQ010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5691)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5691)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5691
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.130"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            98..814
                     /locus_tag="WIX18_001704"
     CDS             98..814
                     /locus_tag="WIX18_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEZ5238781.1"
                     /translation="MNFENDDIIHAPTTSSLILEERHDSELFRVYALILDGITDQVLL
                     PGKKLTESELCRQMVCSRNTVRGALSLLAHDKIVDLQPNRGAFVHVPDLKEMQDVFNA
                     RIEMETMILNILADLPDLETRLKPLYAMIRREEEASGRGDRVGWNRLSNAFHVELARL
                     VGNDVLFDIMNTLCARSSLIVAVAGVHREEKHAINTHTHSEHREILDLLLAGRRNRVV
                     KILRRHLGNCMERLEKTLED"
     gene            963..1865
                     /locus_tag="WIX18_001705"
     CDS             963..1865
                     /locus_tag="WIX18_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine exporter LysO family protein"
                     /protein_id="HEZ5238782.1"
                     /translation="MDSLMTLISVLIPMFAGFFIRVPKPYLPALDKVLSVLVYAVLLL
                     IGVSLSRVEDLGSRLDDMALTVLWLFVCTVGTNLLALAVLGKLFPWRIKGKGKGVSVG
                     VSGSVGQLGCVLLGFASGKLMRDIWMPSESAGMYCLMLLVFLIGVQLKSSGLSLRQVL
                     VNRRGIRLSVWFMLSSLSGGLLFAASADGVSWTKGLAMASGFGWYSLSGLVMTEAYGA
                     VWGSIMLLNDLARELFALAFIPLLMKRFPDAAVGVGGATSMDFTLPVIQGAGGLEVVP
                     VAVSFGVVVNIAAPFLMVVFSTLG"
     gene            1908..2681
                     /locus_tag="WIX18_001706"
     CDS             1908..2681
                     /locus_tag="WIX18_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEZ5238783.1"
                     /translation="MKPKIQRHGEILSLVRRHQFMSVDELAAALDVTPQTIRRDIREL
                     EDAGSLKRHHGGASSGGNLPEGLPASRQIQCQNEKNAIARLIAEHIPDESSLFVSIGT
                     TMEAVVSELVRRRGSLRVITNNIHAASIASARTDYTVIITSGVVRPLDGGITGVATVD
                     FINQFKVDYAVMSTHGVESDGSLLDDDYKEVSVMQAMIANARVRFLGVDHSKFRSNAL
                     VRLGDITAFDKVFTDRLPDTAMQKMLKEAGVECLIADAV"
     gene            2793..4481
                     /locus_tag="WIX18_001707"
     CDS             2793..4481
                     /locus_tag="WIX18_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase/YqeY domain fusion
                     protein"
                     /protein_id="HEZ5238784.1"
                     /translation="MLNKDQFADNHFIRTFIEEDLKSGKHETIQTRFPPEPNGYLHIG
                     HAKSICLNFGLAYIYDGLCNLRFDDTNPEKENDEYVNAIKEDVEWLGFHWAGEPRFAS
                     NYFDQLYDYAVGLVKDGKAYVDDLTPEEMREYRGTLTEAGKNSPYRDRSIEENLDLFT
                     RMKNGEFPDGSKTLRLKIDMASGNINMRDPVIYRIRRAHHHNTGDKWCIYPMYDYTHC
                     ISDAIEGITHSLCTLEFEAHRPLYDWVLDNIPAPHATRPRQYEFSRLELLYTITSKRK
                     LNQLVVEKHVSGWDDPRMPTISGMRRRGYTPEGLRLFAKRAGISKSENIVDMSVLEGA
                     IREELENSAPRLMAVLNPLKVTLTNFETGRTQSRRAAFHPNHEEMGEREVPISQTIYI
                     EADDFAENPPKGFKRLIPGGEVRLRHGYVIKCDEVVKDEAGNVVELKCSIDHDTLGKN
                     PEGRKVKGVIHWVSAEHAAEIKVRLYDRLFTVERPDAVRGEDGEYLPFTDFLNPESVK
                     EITAYAEPAAKDLPAESRWQFERIGYFVTDRKDHGKDTPVFNRTVTLKDSWQPK"
     gene            4574..5530
                     /gene="gshB"
                     /locus_tag="WIX18_001708"
     CDS             4574..5530
                     /gene="gshB"
                     /locus_tag="WIX18_001708"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HEZ5238785.1"
                     /translation="MKVLFIADPMASFKTYKDTTYAMMREMAKRGWRLFHTLSGELSV
                     KNGLVVADASAFEFLGAQDDHDKNWFAAADKVQTALKAFDAVIMRTDPPFDMQYLYAT
                     QLLTLAEQQGAKVFNSGQAMRDFNEKLAILNFSRFTAPTLVTTRSADVRAFLKEHGDI
                     IIKPLDGMGGMGIFRLTEKDPNIGSILETLMQLDSRTIMAQRYIPEIVHGDKRILIIG
                     GEVVPYALARIPQNGETRGNLAAGGRGVAQELGGRDREIAETLAPELKRRGILLAGLD
                     VIGSNLTEVNVTSPTGFQEIMKQKGFDVAAMFADAVAAWSVR"
BASE COUNT         1329 a         1533 c         1575 g         1254 t
ORIGIN      
        1 aatttgtgca atgctttaat tcctctgaca cgatttgaaa cacagccgcc ttaaaatatc
       61 ttaaaaaatt tgaaagcgta aaaatacgga aaacatcatg aactttgaaa acgacgacat
      121 tatccatgcg ccgactacgt cttccctgat tctcgaagag cggcacgatt ctgagctgtt
      181 ccgtgtttac gccctgattt tggacggcat taccgatcag gtgctgctgc ccggcaaaaa
      241 gctgaccgaa tccgaacttt gccgtcagat ggtgtgttcg cgcaacaccg tccgcggcgc
      301 gctgtcgctt ttggcgcacg acaagattgt cgatttgcaa cccaacaggg gcgcgttcgt
      361 ccacgttccc gatttgaaag aaatgcagga tgtgttcaat gcgcgcatcg aaatggagac
      421 gatgattttg aatatcctcg cagatttgcc ggatttggaa acgcgcctca agccgcttta
      481 tgcgatgata cggcgcgaag aagaggcctc cggcaggggc gaccgcgttg gctggaaccg
      541 cctgtccaat gccttccacg tcgaactggc gcgcctggtg ggcaacgatg tgctgttcga
      601 cattatgaac acgctgtgcg cgcggtcttc cctgattgtc gccgtggcgg gcgtgcatcg
      661 cgaggaaaaa cacgccatca atacgcatac gcattcagaa caccgcgaaa tcctcgacct
      721 gctgctggcg ggcaggcgca accgcgtggt caaaatcctg cgccgccatt tgggcaactg
      781 tatggagcgt ttggaaaaga ctttggaaga ttgaatgccg gagcggataa gccgcctgaa
      841 ccttcaggcg gttttttaat ggcgaacctg atgccgtctg aaatatggat gcgggtatct
      901 gcaattttca gacggcaatt tttaaaccgc acatatcatg cggcaataaa ggaggccagg
      961 agatggacag cctgatgaca ttgatttcgg ttttgatacc gatgtttgcc ggatttttta
     1021 tccgtgtgcc caagccttac ctgcccgctt tggataaggt gctatcggtt ttggtgtatg
     1081 ccgtgctgct gctgatcggc gtatcgttgt cgcgcgtgga ggatttgggt tcgcggttgg
     1141 acgatatggc gttgacggtt ctgtggctgt ttgtttgtac ggtcgggacg aacctgcttg
     1201 ctttggcagt gttgggaaag ttattcccgt ggcggataaa ggggaaaggg aagggcgttt
     1261 cggtcggtgt gtcgggcagt gtggggcagc tcggatgcgt gctgctcgga tttgcatccg
     1321 gcaaactgat gcgcgatatt tggatgccgt ctgaaagcgc gggcatgtat tgtctgatgc
     1381 tgctggtgtt cctcatcggc gtacagctca aaagcagcgg cctatcgttg cggcaggttt
     1441 tggtcaaccg caggggtatt cggttgtcgg tctggtttat gctttcatct ctttcgggcg
     1501 ggctgctgtt tgccgcatcg gcagacggtg tgtcgtggac gaaaggtttg gcgatggctt
     1561 ccggcttcgg ttggtattcc ctctcgggtt tggtcatgac cgaggcttac ggcgcggtat
     1621 ggggcagcat catgctgctg aacgatttgg cacgagagct gtttgcactg gcatttatcc
     1681 cgctgctgat gaagcgtttt ccggatgcgg cggtgggggt tggcggtgcg accagtatgg
     1741 attttacatt gcccgtgatt cagggtgcgg gcggtttgga agtcgtgccg gtagcggtca
     1801 gcttcggcgt ggtggtcaat attgccgccc cgtttctgat ggtggtgttt tccacgctgg
     1861 gctgaacgcg gtaaaatcgg catcccgatg caaggaggca gaaaacgatg aaaccgaaaa
     1921 tccaaaggca cggagagatt ttaagccttg tccgccggca tcagtttatg tcggtggacg
     1981 agcttgccgc cgcattggac gttaccccgc agacgatacg ccgcgacatc cgcgaattgg
     2041 aggatgctgg cagcctgaaa cgccaccacg gcggcgcatc ctcgggcgga aacttgccgg
     2101 aggggctgcc tgccagccgc caaattcaat gtcaaaacga aaaaaacgcc attgcccggc
     2161 tgattgcgga acatattccc gacgagtcat cgctgtttgt cagtatcggc acgacgatgg
     2221 aggccgtggt gtcggagctg gtcaggcggc gcggcagcct gagggtgatt accaacaata
     2281 tccacgccgc ctcgattgct tcggcgcgga cggattatac ggtcattatc acttctggag
     2341 tcgtccgtcc tttggacggc ggtattaccg gcgtggcaac cgtcgatttt atcaaccagt
     2401 tcaaagtcga ttatgccgtg atgagtacgc acggcgtgga aagcgacggt tcgcttttgg
     2461 acgacgacta caaagaagtc agcgtgatgc aggcgatgat tgccaatgcg cgcgtccgct
     2521 tcctcggcgt ggaccacagt aaattccgca gcaacgcgct ggtcaggctc ggcgacatta
     2581 cggcgtttga caaagtattt accgaccggc tgcccgatac cgcgatgcag aagatgctga
     2641 aagaggcggg ggtggaatgc ctgattgccg atgccgtctg aacgctatgt caaagcgcgc
     2701 aagtcgggta caataaacac atcatcaaac cgcttcagac ggcataagga accgccccaa
     2761 tgccgtctga agccatctgt tcaaagaaaa ctatgctcaa taaagaccaa tttgcggaca
     2821 accattttat ccgcaccttc atcgaagaag acctcaaaag cggcaaacac gaaaccatcc
     2881 aaacccgttt tccgccggag cccaacggct acctgcacat cggacacgcc aaatccatct
     2941 gcctgaactt cggtttggcg tatatttacg acggcttgtg caacctgcgt tttgacgata
     3001 ccaaccccga aaaagaaaac gacgaatacg tcaacgccat caaagaagac gttgagtggc
     3061 tcggtttcca ttgggcgggc gagccgcgtt tcgcttccaa ctatttcgac cagctttatg
     3121 actacgccgt cggtttggtt aaagacggca aagcgtatgt cgatgatttg acgccagaag
     3181 aaatgcgcga ataccgcggt acgctgaccg aagcaggcaa aaacagccct tatcgcgacc
     3241 gcagtatcga agaaaacctc gacctgttca cgcgcatgaa aaacggtgag ttccccgacg
     3301 gcagcaaaac cctgcgcctg aaaatcgaca tggcatccgg caacatcaat atgcgcgatc
     3361 cggtcatcta ccgcatccgc cgcgcccatc accacaacac cggcgacaaa tggtgcatct
     3421 atccgatgta cgactacacg cattgtattt ccgatgccat cgaaggcatc acgcattcct
     3481 tgtgtacgct cgaatttgaa gcccatcgtc cgctgtatga ctgggtgttg gacaacatcc
     3541 ccgcgccgca cgccacacgt ccgcgccaat acgagttttc acgcttggag cttttgtaca
     3601 ccattacctc caaacggaaa ttgaatcagt tggttgtgga aaaacacgtt tccggctggg
     3661 acgatccgcg tatgccgacc atttccggta tgcgccgacg cggctacacg cccgaagggc
     3721 tgcgcctgtt tgccaaacgc gccggtattt ccaaatctga aaacatcgtc gatatgagcg
     3781 tgttggaagg cgcgattcgc gaagagttgg aaaattccgc cccacgcctg atggcggtgt
     3841 tgaacccgct caaagtgacc ctgaccaact ttgaaaccgg cagaacccaa agccgccgtg
     3901 ccgcgttcca tccgaaccac gaggaaatgg gcgagcgcga agtacctatt tcacaaacca
     3961 tctatattga agccgacgac tttgccgaaa atccgcccaa aggcttcaaa cgcctgattc
     4021 ccggcggcga agtacgcttg cgccacggct atgtcatcaa gtgcgatgaa gtcgtcaaag
     4081 acgaagcagg caatgtggtt gaactcaaat gcagcatcga ccacgacacc ttgggcaaaa
     4141 atccagaagg ccgtaaagtt aaaggcgtga ttcattgggt ttccgccgaa cacgccgccg
     4201 aaatcaaagt ccgtctgtac gaccgcctct ttaccgtcga gcgtcccgat gccgtgcgcg
     4261 gcgaagacgg cgaatacctg ccgttcaccg atttcctcaa tccggaatcc gtcaaggaaa
     4321 tcaccgccta cgccgaacct gccgccaaag atttgccggc agaaagccgt tggcagttcg
     4381 agcgtatcgg ctacttcgta accgaccgta aagaccacgg caaagacacg ccggtgttta
     4441 accgcacggt cacgctgaaa gattcttggc agcctaagta aaaccccatc cttgccgtct
     4501 gaatattgtt cggacggcat ttcccctttg cccgcgaaat gcggcacatt cggcacaccg
     4561 gaaaggaaat atgatgaaag tcctctttat cgccgacccg atggcaagtt tcaaaaccta
     4621 caaagacacc acctacgcca tgatgcgcga gatggcaaaa cgcggttggc ggctgtttca
     4681 taccttgagc ggggaattgt cggttaaaaa cggtctggtg gttgctgatg cgtctgcttt
     4741 tgagtttctc ggcgcacaag acgaccacga caaaaactgg tttgccgccg ccgacaaagt
     4801 tcagacggca ttgaaagcat ttgatgccgt gattatgcgt accgatccgc cgttcgatat
     4861 gcaatacctc tacgccaccc aattactgac gctggcggag cagcagggcg cgaaggtctt
     4921 taacagcgga caggcgatgc gtgatttcaa tgaaaaactg gcgattttga acttcagccg
     4981 ctttaccgcg cccacgctgg taacgacccg ttccgccgat gtccgcgcat ttttgaaaga
     5041 acacggcgac atcatcatta aaccgctcga cggcatgggc ggtatgggca tcttccgcct
     5101 gaccgaaaaa gaccccaaca tcggcagcat cctcgaaacc ctgatgcagc ttgattcccg
     5161 caccattatg gcgcaacgct acattcccga aatcgtacac ggtgacaaac gcatcctgat
     5221 tatcggcggc gaagtcgtcc cctatgcttt ggcgcgtatc ccgcaaaacg gcgaaacacg
     5281 cggcaacctt gcggcaggcg ggcgcggcgt ggcgcaggaa ttgggcggac gcgaccgcga
     5341 aattgccgaa acgctcgccc ccgaactcaa acggcgcggc atcctgctgg ccggtttgga
     5401 cgttatcggc agcaacctga ccgaagtcaa cgtaaccagc ccgaccggat tccaagaaat
     5461 tatgaaacaa aaaggtttcg acgtggcggc aatgtttgcc gatgccgttg ccgcgtggtc
     5521 ggtacgttaa accgatgccg tttgaaaggc ttttgcttca caaccgtttg gtttgatcgg
     5581 gcaggcaggg ttttccctca gccggcagag atacgcttaa tgccgtacgg acacaccgcc
     5641 gccccgtttt cagacggtat atatagtgga ttaacaaaaa tcaggacaag g
//
LOCUS       DAWITQ010000131         5670 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.131, whole genome shotgun sequence.
ACCESSION   DAWITQ010000131 DAWITQ010000000
VERSION     DAWITQ010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5670)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5670)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5670
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.131"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            73..999
                     /gene="fabD"
                     /locus_tag="WIX18_001709"
     CDS             73..999
                     /gene="fabD"
                     /locus_tag="WIX18_001709"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEZ5238786.1"
                     /translation="MSFAFFFPGQGSQSLGMMNGFAEQAIVKATFDEASAILGQDLWA
                     MINGSDAEIIGQTVNTQPIMLAAGVAVYRAYLEAGGKTPAAVAGHSLGEYTALVAAGA
                     LNFADAVKLVRLRAELMQSAVPQGVGAMAAILGLEDEQVRQICTESAQDEVVEAVNFN
                     SPGQVVIAGNAAAVGRAMTAAKEAGAKRALPLPVSVPSHCSLMKPAADKLAEALKTVE
                     IKQPQIRVIHNADVAAYDDADKIKDALVRQLYSPVRWTETVNALVSDGIAESAECGPG
                     KVLAGLAKRINKTAACSALTDAGQVAAFIEAH"
     gene            1138..3003
                     /gene="msbA"
                     /locus_tag="WIX18_001710"
     CDS             1138..3003
                     /gene="msbA"
                     /locus_tag="WIX18_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A export permease/ATP-binding protein
                     MsbA"
                     /protein_id="HEZ5238787.1"
                     /translation="MIEKLTFGLFKKEDARSFMRLMAYVRPYKIRIIAALIAIFGVAA
                     TESYLAAFIAPLINHGFSAPAAPPELSAAAGIISTLQNWREQFTYMVWGTENKIWTVP
                     LFLIILVVIRGICRFTSTYLMTWVSVMTISKIRKDMFAKMLTLSSRYHQETPSGTVLM
                     NMLNLTEQSVSNASDIFTVLTRDTMIVTGLTIVLLYLNWQLSLIVVLMFPLLSLLSRY
                     YRDRLKHVISDSQKSIGTMNNVIAETHQGHRVVKLFNGQAQAANRFDAVNRTIVRLSK
                     KITQATAAHSPFSELIASIALAVVIFIALWQSQNGYTTIGEFMAFIVAMLQMYAPIKS
                     LANISIPMQTMFLAADGVCAFLDTPPEQDKGTLAPQRVEGRISFRNVDVEYRSDGIKA
                     LDGFNLDIRQGERVALVGRSGSGKSTVVNLLPRFVEPSAGNICIDSIDIADIKLDCLR
                     AQFALVSQDVFLFDDTLFENVRYSRPDAGEAEVLFALQTANLQSLIDSSPLGLHQPIG
                     SNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERLMENRTGI
                     IVAHRLTTIEGADRIIVMDDGKIIEQGTHEQLMSQNGYYTMLRNISNKDAAVRTA"
     gene            3103..4668
                     /gene="guaA"
                     /locus_tag="WIX18_001711"
     CDS             3103..4668
                     /gene="guaA"
                     /locus_tag="WIX18_001711"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HEZ5238788.1"
                     /translation="MTQDKILILDFGSQVTQLIARRVREAHVYCELHSFDMPLDEIKA
                     FNPKGIILSGGPNSVYESDYQADTGIFDLGIPVLGICYGMQFMAHHLGGEVQPGNQRE
                     FGYAQVKTIDSELTRGIQDGEPNTLDVWMSHGDKVSKLPDGFAVIGDTPSCPIAMMEN
                     AEKQFYGIQFHPEVTHTKQGRALLNRFVLDICGAQPSWTMPNYIEEAVAKIREQVGSD
                     EVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRLNEGKMVMDMFARNLGVKVI
                     HVDAEGQFMAKLAGVTDPEKKRKIIGAEFIEVFDAEEKKLTNAKWLAQGTIYPDVIES
                     AGAKTKKAHAIKSHHNVGGLPENMKLKLLEPLRDLFKDEVRELGVALGLPREMVYRHP
                     FPGPGLGVRILGEVKKEYADLLRQADDIFIQELRNTTDENGTSWYDLTSQAFAVFLPV
                     KSVGVMGDGRTYDYVVALRAVITSDFMTAHWAELPYSLLGRVSNRIINEVKGINRVVY
                     DVSGKPPATIEWE"
     gene            4730..5476
                     /gene="fabG"
                     /locus_tag="WIX18_001712"
     CDS             4730..5476
                     /gene="fabG"
                     /locus_tag="WIX18_001712"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HEZ5238789.1"
                     /translation="MSTQDLSGKIALVTGASRGIGAAIADTLAAAGAKVIGTATSESG
                     AAAISERLAQWGGEGRVLNSAEPETVENLIADIEKTFGKLDILVNNAGITRDNLLMRM
                     KEEEWDDIMQVNLKSVFRASKAVLRGMMKQRSGRIINITSVVGVMGNAGQTNYAAAKA
                     GLIGFSKSMVREVGSRGITVNCVAPGFIDTDMTRALPEETRQTFTAQTALGRFGDAQD
                     IADAVLFLASDQAKYITGQTLHVNGGMLMP"
BASE COUNT         1386 a         1823 c         1373 g         1088 t
ORIGIN      
        1 attttgtccc gcctgaattt ttcgtaaaac tcgggcagaa tacctgatta tccaaccaaa
       61 caaaggaata ctatgtcttt tgcattcttc tttcccggac aaggctcaca aagcctaggc
      121 atgatgaacg gctttgccga gcaagccatc gttaaagcca catttgacga agcttccgcc
      181 atattggggc aggacttgtg ggcgatgatt aacggcagcg atgccgaaat catcggtcaa
      241 accgtcaaca cccagcccat tatgctcgcc gccggcgttg ccgtttaccg cgcctatttg
      301 gaagcgggcg gcaaaacgcc tgccgccgtt gccggacaca gcctcggcga atacaccgca
      361 ctcgttgccg ccggcgcatt gaattttgcc gacgcggtca aactcgtgcg cctacgcgcc
      421 gaactgatgc agtccgccgt accgcaaggc gtgggcgcaa tggcggcaat tttgggtttg
      481 gaagatgaac aggtaaggca gatttgcacc gaatccgcac aggatgaagt ggttgaagcc
      541 gtcaacttca actcgcccgg acaagtcgta attgcaggca atgccgccgc cgtcggacgc
      601 gccatgaccg ccgccaaaga agccggtgcc aaacgcgccc tgccgctgcc cgtgtccgta
      661 ccttcccatt gcagcctcat gaaacccgcc gccgacaaac tcgccgaagc cctcaaaacc
      721 gtcgaaatca agcagccgca aatccgcgtc atccacaacg ccgacgttgc cgcctacgat
      781 gatgccgaca aaatcaaaga cgcgctcgtc cgccagcttt acagccccgt acgctggacg
      841 gaaaccgtca acgcccttgt ttcagacggc attgccgaat ccgccgaatg cggaccgggc
      901 aaagtgttgg cgggcttggc aaaacgcatc aacaaaaccg ccgcgtgcag cgcgctgacc
      961 gatgccggac aggttgccgc ctttatcgaa gcgcactgac ttcgttccgc aaaaagcagc
     1021 ctgccctctt caggctgctt ttcacgtccg aacggcaaac agccgcatat ttacgctata
     1081 atccatcccg accaaaccac cgacagcggc tgccgttgca gtttccgccc caccgatatg
     1141 atagaaaaac tgactttcgg actgtttaaa aaagaagacg cgcgcagctt tatgcgcctg
     1201 atggcatacg tccgccccta caaaatccgc atcattgccg ccctgattgc cattttcggc
     1261 gttgccgcca ccgaaagcta ccttgccgcc ttcatcgccc ccctgattaa ccacggcttt
     1321 tccgcacctg ccgcgccgcc cgagctgtct gccgccgccg gcatcatttc caccctgcaa
     1381 aactggcgcg aacagtttac ctatatggtt tgggggacgg aaaacaaaat ctggaccgtc
     1441 ccgctcttcc tcatcatcct cgtcgtcatc cgtggcatct gccgctttac cagcacctat
     1501 ctgatgactt gggtctccgt gatgaccatc agcaaaatcc gcaaagatat gtttgccaaa
     1561 atgctgaccc tttcctcccg ctaccatcag gaaacgccgt ccggcaccgt actgatgaat
     1621 atgctcaacc tgaccgaaca gtcggtcagc aacgccagcg acatcttcac cgtcctcacg
     1681 cgcgacacga tgatcgttac cggcctgacc atcgtcctgc tttacctcaa ctggcagctc
     1741 agcctcatcg tcgtcctgat gttccccctg ctctccctgc tctcgcgcta ctaccgcgac
     1801 cgtctgaaac acgtcatttc cgactcgcaa aaaagcatag gcacgatgaa caacgtgatt
     1861 gccgaaaccc atcagggaca ccgcgtcgtc aagctgttca acgggcaggc gcaggcggca
     1921 aaccggttcg acgcggtcaa ccgcaccatc gtccgcctca gcaaaaaaat cacgcaggca
     1981 acggcggcac attccccgtt cagcgaactg atcgcctcga tcgccctcgc cgtcgtcatc
     2041 ttcatcgccc tgtggcaaag ccaaaacggc tacaccacca tcggcgaatt tatggcattc
     2101 atcgtcgcga tgctgcaaat gtacgccccc atcaaaagcc ttgccaacat cagcatccct
     2161 atgcagacga tgttcctcgc cgccgacggt gtatgtgcat ttctcgacac cccgcccgaa
     2221 caggacaaag gcacgctcgc gccgcagcgt gtcgaagggc gcatcagctt ccgcaacgtc
     2281 gatgtcgaat accgttcaga cggcatcaaa gccctcgacg gcttcaacct cgacatcaga
     2341 caaggcgaac gcgtcgccct ggtcggacgt tccggcagcg gcaaatccac cgtcgtcaac
     2401 ctgctgcccc gctttgtcga accgtctgcc ggcaacatct gcatagacag tatcgacatc
     2461 gccgacatca aactcgactg cctgcgcgcc caattcgccc tcgtctccca agacgtattc
     2521 ctgtttgacg ataccctttt tgaaaacgtc cgatatagcc gtcccgacgc aggcgaagcc
     2581 gaagtcctgt tcgccctcca aaccgccaac ctgcaaagcc tgattgacag ctccccgctc
     2641 ggactgcacc agcccatcgg atcgaacggc agcaacttat ccggcggaca gcggcaacgc
     2701 gtcgccattg cccgcgccat tttgaaagac gcgccgatat tattattgga cgaagccacc
     2761 agcgcattag acaacgaatc cgaacgcctc gtccaacaag cgctcgaacg cctgatggaa
     2821 aaccgcaccg gcatcatcgt cgcccaccgc ctgaccacca tcgaaggggc cgaccgcatc
     2881 atcgtgatgg acgacggcaa aatcatcgaa caaggcacac acgaacaact gatgtcccaa
     2941 aacggctact acacaatgtt acgcaatatc tcaaacaaag atgccgccgt ccggacggca
     3001 taaacaaaat gccgtccgaa atggtacaat cgccccgacc ctttcagacg gcatcatatc
     3061 cgccgaccca tccgattatc ttcaatcact gtaaaaccca ttatgaccca agacaaaatc
     3121 ctcatcctcg acttcggttc tcaagttacc cagctgattg cccgccgcgt gcgcgaagcc
     3181 cacgtttact gcgaactgca ttccttcgat atgcctttgg acgaaatcaa agccttcaac
     3241 cccaaaggca tcatcctctc tggcggcccc aattccgttt acgaatccga ctatcaagcc
     3301 gataccggta tttttgattt gggcattccg gttttgggca tctgttacgg catgcagttt
     3361 atggcgcacc acttgggcgg cgaagtgcag cccggcaacc agcgcgaatt cggttatgcg
     3421 caagttaaaa ccatagacag cgagctgaca cgcggcattc aagatggtga gccaaacaca
     3481 ctcgacgtat ggatgagcca cggcgacaaa gtgtccaaac tgcccgacgg tttcgccgtc
     3541 atcggcgaca cgccgtcctg cccgattgcc atgatggaaa acgccgaaaa acaattctac
     3601 ggcatccaat tccaccccga agttacccac accaaacaag gccgcgccct gttgaaccgc
     3661 tttgtcttgg atatttgcgg cgcgcaacct agctggacga tgccgaacta catcgaagaa
     3721 gccgttgcca aaatccgcga acaggtcggc agcgacgaag tgattttggg tttgtccggc
     3781 ggcgtggact cttccgtagc cgccgcgctg attcaccgcg ccatcggcga ccaactgacc
     3841 tgcgtgttcg tcgatcacgg tttgttgcgc ctgaacgaag gcaaaatggt gatggatatg
     3901 ttcgcccgca acttgggtgt gaaagtgatt cacgtcgatg ccgaagggca gtttatggcg
     3961 aaactcgccg gcgtgaccga tccggagaaa aaacgcaaaa taatcggcgc ggaatttatc
     4021 gaagtatttg atgccgaaga gaaaaaactc accaacgcca aatggctggc gcaaggcacg
     4081 atttaccctg acgtaatcga atccgcaggc gcgaaaacca aaaaagccca cgccatcaaa
     4141 tcgcaccaca acgtcggcgg cctgcctgaa aacatgaagc tcaagctgct tgagccgttg
     4201 cgcgacttat tcaaagacga agtgcgcgaa ctcggcgtcg ctttgggctt gccgcgcgaa
     4261 atggtgtacc gccatccgtt ccccggtccc ggtttgggcg tgcgcatctt gggcgaagtg
     4321 aaaaaagaat acgccgactt attgcgtcaa gcagacgata ttttcatcca agaattacgc
     4381 aatactaccg acgaaaacgg cacatcttgg tacgacctga ccagccaagc cttcgccgtc
     4441 ttcctgcccg taaaatccgt cggcgtaatg ggcgacggac gcacttacga ctacgtcgtc
     4501 gcactgcgcg cagtcatcac cagcgacttc atgaccgcac actgggcaga actgccttac
     4561 tcactgctcg gacgcgtgtc caaccgcatc atcaacgaag tcaaaggcat caaccgcgtg
     4621 gtgtacgatg tcagcggcaa accgcctgcc accatcgagt gggaataacc agcaaacagg
     4681 gctgcaccgt ccggcgcagt ctttcgatta tcggaaaaaa ggaaaaaata tgagcacaca
     4741 agatttaagc ggcaaaatcg ctttggtaac cggcgcatcg cgcggtatcg gtgcagcaat
     4801 tgccgacaca ctggcggcag ccggtgccaa agtcatcggt acggcgacca gtgagagcgg
     4861 tgcggcggcg attagcgagc ggttggcgca atggggcggc gaaggccgcg tattaaattc
     4921 cgccgaaccc gaaaccgtcg aaaacctgat tgccgacatc gaaaaaacgt tcggcaaact
     4981 cgatattctg gtcaacaacg ccggcatcac ccgcgacaac ctcctgatgc gcatgaaaga
     5041 agaagagtgg gacgacatca tgcaggtcaa cctcaaatcc gtgttccgcg cttctaaagc
     5101 cgttttgcgc ggtatgatga aacaacgttc cggccgcatc atcaacatca catccgtcgt
     5161 cggcgtgatg ggcaatgccg gtcaaaccaa ctatgccgcg gcaaaagcag gcttaatcgg
     5221 tttctccaaa tccatggtgc gcgaagtcgg cagccggggc attaccgtca actgcgtcgc
     5281 ccctggcttt atcgataccg acatgacacg cgccctgccg gaagaaaccc gccaaacctt
     5341 taccgcccaa accgccttgg gcagattcgg cgacgcgcaa gacatcgccg atgcggttct
     5401 gttcctcgct tccgaccaag caaaatacat caccggccaa acgctgcacg tcaacggcgg
     5461 tatgctgatg ccctgacggg cagccgtacc gacaatgccg tctgaagccc tttcagacgg
     5521 catttgcatt ctcaggcaaa atgaacacac gccacacccc gccctgcccc tgcggatcag
     5581 gcacaagctg agacctttgc aaaactcctt tccctcccga cagccgaaac ccaaacacag
     5641 gttttcggct gttttcgccc caaatacctc
//
LOCUS       DAWITQ010000132         5667 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.132, whole genome shotgun sequence.
ACCESSION   DAWITQ010000132 DAWITQ010000000
VERSION     DAWITQ010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5667)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5667)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5667
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.132"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            16..207
                     /locus_tag="WIX18_001713"
     CDS             16..207
                     /locus_tag="WIX18_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238790.1"
                     /translation="MFQQRTAHQAPHCVLPERDYPTIRFYRYKQTGFNRKGMGIKSIS
                     DISRAMPSENQSPLSDGIV"
     gene            284..1231
                     /locus_tag="WIX18_001714"
     CDS             284..1231
                     /locus_tag="WIX18_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HEZ5238791.1"
                     /translation="MNILSKISSFIGKTFSLWVALFAAAAFFAPDTFKWAGPYIPWLL
                     GIIMFGMGLTLKPSDFDILFKHPKAVIIGVIAQFAIMPATAWLLSKLLNLPAEIAVGV
                     ILVGCCPGGTASNVMTYLARGNVALSVAVTSVSTLISPLLTPAIFLMLAGEMLEIQAA
                     GMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKI
                     MESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKTLAIEVGMQNSGLAAALAAAH
                     FAAAPVVAVPGALFSVWHNISGSLLATYWAAKAGKHKKP"
     gene            complement(1384..2508)
                     /gene="rluD"
                     /locus_tag="WIX18_001715"
     CDS             complement(1384..2508)
                     /gene="rluD"
                     /locus_tag="WIX18_001715"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HEZ5238792.1"
                     /translation="MQNTSFDNESDYSDDSDFASASETENRIGLTVPLELAGGRLDAV
                     LAKLLPDYSRSRLTSWIKEGAVIVNDKPSQPKDKMIGGEQICVTVRPSEENLAFVPEP
                     MALDIVYEDDTVIVVNKPAGLVVHPAAGNWTGTLLNGLLAHCPELSQIPRAGIVHRLD
                     KETSGLMVVAKTLSAQNSLVRQLQERTVKRIYRAVANGIVPFDGKIETQIGRDPHNRL
                     KMAVVKFGGKPAVTHVKVLERYLAHSYIECSLETGRTHQIRVHMREANHPLAGDPVYG
                     NPRHPCGDTVKEAVKSLGARQALHAYRLSFTHPESGETVSFEAPIPDDIYHLLSVLRL
                     EAGLDSSLSNEEEWQDKFGADDDDDWNEDDYDVEVVYVRE"
     gene            2507..3310
                     /locus_tag="WIX18_001716"
     CDS             2507..3310
                     /locus_tag="WIX18_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HEZ5238793.1"
                     /translation="MKKILLTVSLGLALSACATQGTVDKDAQITQDWSVEKLYAEAQD
                     ELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLH
                     PQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNS
                     KYAADATARMVKLVDALGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESL
                     AILELAYQKLGKPQLAADTRRVLETNFPKSPFLTHAWQPDDMPWWRYWH"
     gene            complement(3368..5587)
                     /locus_tag="WIX18_001717"
     CDS             complement(3368..5587)
                     /locus_tag="WIX18_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HEZ5238794.1"
                     /translation="MFRRWFLPCWVVGAAASFALPVVPHWLFWLAAFAVFAVFARRFA
                     FAGLMLCVLAGAAYGVFRTEAALSSQWWAEAVSGVPLTVEVADMPRSDGRRVQFAAKA
                     VDSGGRTFDLLLSDYKRREWAVGSRWRITARVHPVVGELNLRGLNREAWALSNGIGGA
                     GTVGADRVLLHGGSGWGIAVWRSRISRNWQQADADGGLSDGIGLMRALSVGEQSALRP
                     ELWQAFRPLGLTHLVSISGLHVTMVAVMFAWLAKRLLACSPRLPARPRAWVLAAGCAG
                     ALFYALLAGFSVPTQRSVLMLAAFAWAWRRGRLSAWATWWQALAAVLLFDPSAVLGVG
                     TWLSFGLVAALIWACSGRLHEGKRQTALRGQWAASVLSLVLLGYLFASLPLVSPLVNA
                     VAIPWFSWVLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLADVSPEFAVASAPLP
                     LLVLAVCAALLLLLPRGLGLRPWAVLLLAGFVFYRSPGVPENEVAVTVWDAGQGLSVS
                     VQTANHHLLFDTGTAAAAQMGIVPSLNASGIRYLDYLVLSHHDSDHDGGFQAVGKIPN
                     GGIYAGQPEFYEGARHCAEQRWQWDGVDFEFLMPSERKNIDDNGKSCVLRVVAGGAAL
                     LVTGDLDTKGEESLVGKYGGNLYSQVLVLGHHGSNTSSSGVFLNAVSPEYAVASSGYA
                     NAYKHPTEAVQNRVRAHGIKLLRTDLSGALQFGLGRGGVKAQRLRGYKFYWQKKPFE"
BASE COUNT         1362 a         1796 c         1371 g         1138 t
ORIGIN      
        1 ttctccgagc tttatatgtt tcaacagagg acggcacatc aagcaccgca ctgcgtgttg
       61 cccgaacgag actaccctac gattagattc tatcgctata aacagacggg tttcaaccga
      121 aaaggaatgg ggataaagtc catttccgac atctctcggg cgatgccgtc tgaaaaccaa
      181 tctccacttt cagacggcat tgtttaggca cggtcatttt gcaaattaag gttaaggcgt
      241 gtatgcttgc cttcccttaa aaacaaacac gcaacgcatt attatgaata tcctcagtaa
      301 aatcagcagc tttatcggaa aaacattttc cctctgggtc gcgctctttg ccgccgccgc
      361 ttttttcgcg cccgacacct tcaaatgggc ggggccttat attccttggc tgttgggcat
      421 tattatgttc ggtatgggtt tgacgctcaa accttccgac ttcgatattt tgttcaaaca
      481 tcccaaagcc gtcatcatcg gcgtaatcgc acaattcgcc attatgccgg caaccgcctg
      541 gctgctgtcc aaactgttga acctgcctgc cgaaatcgcg gtcggcgtga ttttggtcgg
      601 ctgctgcccg ggcggtacgg cttccaatgt gatgacctat ctggcgcgcg gcaatgtggc
      661 tttgtcggtt gccgttacgt ctgtttccac cctgatttcc ccattgctga ctcccgccat
      721 cttcctgatg cttgccggtg aaatgctgga aatccaagcg gccggtatgt tgatgtccat
      781 cgtcaaaatg gttttgctcc ccattgtttt gggtttgatt gtccataagg ttttgggcag
      841 taaaaccgaa aagctgaccg atgcgctgcc gctggtttcc gttgccgcca tcgtgctgat
      901 tatcggcgcg gttgttgggg caagcaaagg caagattatg gaaagcggcc tgctgatttt
      961 tgcggttgtc gtactccaca acggcatcgg ctacctgctc ggcttctttg ccgccaaatg
     1021 gaccggcctg ccttatgatg cacaaaaaac gctggccatc gaagtcggta tgcaaaactc
     1081 gggtctggcc gccgcgctgg ccgccgcaca ctttgccgct gcgccggtcg ttgccgttcc
     1141 gggcgcattg ttcagcgtgt ggcacaatat ctccggctcg ctgctggcaa cttattgggc
     1201 ggccaaagcc ggtaaacata aaaaacccta aacgcctttc atcataatgc cgtctgaacg
     1261 gggcaaacaa aactggcggt ttctgcccgg ccccttcaga cggcctttgt ttgaaatcgg
     1321 cggggacgat tgcccggctg ctccggttcg gctgcctgcg ttcgccccgc ctttcaagcc
     1381 acctcactcc cttacataaa ccacttcgac atcgtagtcg tcttcgttcc aatcgtcatc
     1441 gtcgtccgcg ccgaatttgt cctgccattc ctcttcattg ctcaaagacg aatccaaacc
     1501 ggcttcaaga cggaggacag acaataaatg atatatgtcg tccggaatcg gtgcctcaaa
     1561 cgaaacggtt tcgccgcttt ccggatgggt aaaactcaag cggtaggcgt gcaatgcctg
     1621 acgcgcaccc aaacttttaa cggcttcttt caccgtgtcg ccgcacggat ggcgcgggtt
     1681 gccgtaaacc gggtcgccgg caagcggatg gttggcctca cgcatatgga cgcggatttg
     1741 gtgcgtcctg cctgtttcga gcgagcattc gatatagctg tgggcaagat agcgttccaa
     1801 cactttgacg tgggtaacgg ctggtttgcc gccgaatttg acgactgcca ttttcaggcg
     1861 gttgtgcgga tcgcgtccga tttgggtttc gattttaccg tcaaagggga cgatgccgtt
     1921 ggcgacggcg cggtagatgc gtttgaccgt gcgttcttga agctgcctca cgagggaatt
     1981 ttgcgccgac agggttttgg caaccaccat cagcccgctg gtttctttgt ccaaacggtg
     2041 tacgatgccc gcgcgcggaa tttgggacag ctcggggcaa tgcgccaaca ggccgttgag
     2101 cagcgtcccc gtccagttgc ccgccgccgg atgcaccacc agtccggccg gtttgttgac
     2161 gacgatgacg gtatcgtctt cgtaaacaat atccaaagcc ataggctctg gaacaaacgc
     2221 cagattttcc tcactcggac ggacggttac acaaatttgc tcgccgccta tcattttgtc
     2281 tttgggttgc gaaggtttat cgtttacaat aaccgcgcct tctttaatcc atgatgtcag
     2341 gcggctgcgc gagtagtcgg gcagaagttt cgccaacacc gcatccaacc gcccgccggc
     2401 aagctcgagc ggaacggtca gaccgatacg gttttcagtt tcggaagctg acgcaaagtc
     2461 tgaatcgtcg ctataatcgg attcattatc aaaggaagta ttctgcatga aaaaaattct
     2521 tttaacggtt tcattaggtt tggcactgag tgcctgtgcc actcaaggta cggtcgataa
     2581 agatgctcag attacccaag attggagtgt ggagaagctc tatgccgaag cccaggacga
     2641 attgaacagc agcaattata cgcgggctgt caagttatac gaaatcttgg aatcgcgctt
     2701 ccccaccagc cgccatgccc ggcaatccca actggatacc gcatacgcct attataaaga
     2761 cgatgaaaaa gacaaggctc tggcggcaat cgaacgcttc cgccgcctcc atccgcagca
     2821 tccgaatatg gattacgcgc tgtatctgcg cggcttggtg ctgttcaacg aagaccagtc
     2881 cttcttgaac aaactggcct cgcaagactg gtccgaccgc gacccgaaag ccaaccgcga
     2941 agcgtatcag gcctttgcgg aactcgtcca acgcttcccg aacagcaaat acgccgccga
     3001 tgcaaccgca cgcatggtca aactggtcga tgcactgggc ggcaatgaaa tgtcggtggc
     3061 gcgttactac atgaaacgcg gcgcatatat cgccgccgcc aaccgcgccc aaaaaattat
     3121 cggcagctat caaaatacac gctatgtcga agaatcgctc gccatattgg aacttgccta
     3181 ccaaaaactc ggcaaaccgc agcttgccgc cgatacgcgc cgcgtgttgg aaaccaactt
     3241 cccgaaaagc ccgtttttga cgcacgcctg gcagcccgac gatatgccct ggtggcgtta
     3301 ctggcattaa gcccatcttc gtaatgccgt ctgaagccgt ttcagacggc attttatgtt
     3361 tcaaacctca ttcaaacggt tttttctgcc aatagaattt ataccctctc aaacgttgag
     3421 ccttcacgcc gccgcgtccc aagccgaatt gcagtgcgcc cgacaaatcg gtacgcagca
     3481 gtttgatgcc gtgtgcgcgg acacggttct gcaccgcttc ggtcggatgt ttgtaggcgt
     3541 tggcataacc gcttgaagca acggcatatt cgggcgagac ggcattgagg aacacgcccg
     3601 acgaggacgt attgctgccg tgatgtccca aaaccaaaac ctggctgtac aggttgcctc
     3661 catacttgcc gaccaggctt tcctcgccct tcgtatccaa atcgcccgtt accagcagtg
     3721 ccgcaccgcc cgccacaaca cgcaaaacac aacttttccc attatcatcg atgtttttgc
     3781 gttcagacgg catcaaaaac tcaaaatcca cgccgtccca ttgccaacgc tgttccgcac
     3841 aatgccgcgc cccctcataa aattccggct gcccggcata aatcccgccg ttcggtatct
     3901 tgccgactgc ctgaaaaccg ccgtcgtggt cgctgtcgtg atgcgacaaa accaaataat
     3961 ccaaatacct gattcccgac gcattcaagc tcggcacaat ccccatctgc gccgccgctg
     4021 ccgttccggt gtcaaacaaa agatgatgat ttgccgtctg aaccgacacc gacaaaccct
     4081 gccccgcatc ccaaaccgta accgcaacct cattttccgg cacgccgggt gaacggtaaa
     4141 acacaaaccc tgccaacagc aacaccgccc acggacgcaa acccaagccg cgcggcagca
     4201 gcaacagcaa agcggcacac accgccaaca ccaacagcgg caaaggtgcg gaggcaacgg
     4261 caaactcggg cgacacatcg gcaagccaca ccaaaaaccg caaagtatat tccgccaaaa
     4321 atgcccccaa ctgttgcaaa ggcgcaaacg gcacgaccga acccagcaac gccagcggcg
     4381 tcaataccca agaaaaccac ggaattgcca ccgcattgac caaagggctg accaaaggca
     4441 gcgaagcaaa cagataaccg agcaaaacca gcgacaacac cgaagccgcc cactgcccgc
     4501 gcaaagcagt ttgccgtttt ccctcgtgca aacgccccga gcacgcccat atcagggccg
     4561 ccaccaaacc gaaagacagc caagtcccca cacccaagac cgccgacggg tcgaacagca
     4621 gcaccgccgc caacgcctgc caccacgtcg cccacgccga caatcttccc ctgcgccaag
     4681 cccacgcaaa cgccgccaac atcaaaacgc tgcgctgcgt cggcacggaa aaaccggcaa
     4741 gcagcgcgta aaacagcgcg cctgcacacc ccgccgccaa aacccacgcg cgcggccggg
     4801 caggaaggcg cggggaacag gcaagcagcc gcttcgccag ccacgcaaac attaccgcca
     4861 ccatcgtaac gtgcaaaccc gaaatactga ccaaatgcgt cagccccaac ggccggaacg
     4921 cctgccacaa ttcggggcgc aatgccgact gttcgcccac gctcaacgcg cgcatcagcc
     4981 cgatgccgtc tgaaagcccg ccgtccgcat ccgcctgctg ccaattacgg ctgatgcggc
     5041 tgcgccaaac cgcaatcccc caaccgcttc cgccatgcag caaaaccctg tccgcaccga
     5101 ccgtccccgc gccgcctatt ccgttggata atgcccacgc ctcacggttc aaaccgcgca
     5161 ggttcaactc cccgacgaca gggtgcacac gtgccgttat ccgccatctg ctcccgaccg
     5221 cccattcgcg ccgtttgtag tccgacagca gcaaatcaaa cgtccgacca ccgctgtcca
     5281 cagcctttgc cgcaaactgc acacgccgcc cgtccgacct cggcatatcc gccacttcca
     5341 ccgtcaaagg cacgcctgaa acggcttctg cccaccattg ggaagacaat gccgcctccg
     5401 tcctgaatac gccgtaagcc gcgcccgcca acacgcacag catcagaccg gcaaacgcaa
     5461 aacgccttgc aaacacagca aaaaccgcaa aagccgccag ccaaaacagc caatgcggca
     5521 cgaccggcag cgcgaacgaa gccgccgcac cgacaaccca acacggcaaa aaccaacgac
     5581 ggaacacgtc tccccacccc agatatttca aaaataaacg gataataaag caaatccgaa
     5641 aaaccgtcat aacaagattt gaaaatg
//
LOCUS       DAWITQ010000133         5565 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.133, whole genome shotgun sequence.
ACCESSION   DAWITQ010000133 DAWITQ010000000
VERSION     DAWITQ010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5565)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5565)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5565
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.133"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            132..566
                     /locus_tag="WIX18_001718"
     CDS             132..566
                     /locus_tag="WIX18_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HEZ5238795.1"
                     /translation="MPLPAPCRFAKPAASFLSMALLSCQLSHAATAYIPPNDFQPNCD
                     IRRLGLTQSQHNELRKIRTAFKMAGDRARLKVMHSEHSRRRSVVEIISSDVFNRNEAR
                     DYVESRYLSGMDFAVDELEIQHRFFHILTPQQQQMWLSSCLK"
     gene            complement(579..1442)
                     /locus_tag="WIX18_001719"
     CDS             complement(579..1442)
                     /locus_tag="WIX18_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEZ5238796.1"
                     /translation="MELNEFLDKAYAVLRRLDAVLPPEPGHTDWNALAFRWQSAGKKG
                     FLEHLPDPHTFPLVRLAGVGRQTELLVRNTEQFIVGRPANNVLMSGARGTGKSSLVKA
                     LLHEYADKGLRLIEVDKSDLIGLPYLLTLLKERPEKFIVFCDDLSFESGDETYKALKT
                     ALDGGLSQRCANVLVYATSNRRHLMPEYFDENAGTTGMRGEIHQKEAVEEKISLSDRF
                     GLWLSFYPFDQNDYLAAVQNWLEDFGVPYDETAQMAALQWAQTRGSRSGRSAWQFACD
                     WAGRLPKQRAL"
     gene            complement(1450..2067)
                     /locus_tag="WIX18_001720"
     CDS             complement(1450..2067)
                     /locus_tag="WIX18_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HEZ5238797.1"
                     /translation="MFTGIVQGLGKLTAIHRPSEAFHTYVVELPQEAADNLQRGASVA
                     NNGCCLTITEIEGNRVSFDLMAETLAKTNLGLLKEGDCVNIERAARFGDEIGGHVMSG
                     HIMATVPIVEIERDGFNRTVWFSLPHELKPYILTKGFVGLDGCSLTIGKVEDGRFNVH
                     LIPETLERTLFGSRKVGDRINIEIDPNTQAIVDTVERLMAQRYAK"
     gene            complement(2229..2700)
                     /locus_tag="WIX18_001721"
                     /pseudo
     CDS             complement(2229..2700)
                     /locus_tag="WIX18_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221680.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
     gene            2823..4595
                     /locus_tag="WIX18_001722"
     CDS             2823..4595
                     /locus_tag="WIX18_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite sensor histidine kinase"
                     /protein_id="HEZ5238798.1"
                     /translation="MILPARFSDGISLSLRLKLLTGVWVGLAALSVVLTLLLSLRLEN
                     AASVIEEAGNLRMQAYRLAYMAGEGSPRAQIDNQVAEFEKSLNRISQSDAIHPLIPSD
                     TPLAYDLIQSMLIIDWQAHILPPLQSYRRPTQVDLYRFAGNIELFLQALENANEKNTW
                     WLRRFQWAIMLMTLVSSVLMLFWHQIWVIRPLQALREGAERIGRRCFDIPVPEGGTPE
                     FKQVGRCFNQMGGRLKILYDDLEGQVAEQTRSLEKQNQNLTLLYQTTRDLHQSYIPQQ
                     AAEHFLNRILPAVGADSGRVCLDGGSDVYVSIHHADCGTAASDLGKYHEEIFPIEYQN
                     ETLGRLLLSFPNGISLDEDDRILLQTLGRQLGVSLAGAKQEEEKRLLAVLQERNLIAQ
                     GLHDSIAQALTFLNLQVQMLETAFAENKREEAAENIGFIKTGVQECYEDVRELLLNFR
                     TKISNKEFPEAVADLFARFTQQTGITVETAWENGSFLPPQEAQLQMIFILQESLSNIR
                     KHARATHVKFTLSEHGGRFTMTIQDNGQGFDTEKIGEPTGSHVGLHIMQERAKRIHAV
                     LEIRSQAQQGTTVSLTVASEESLK"
     gene            4592..5248
                     /locus_tag="WIX18_001723"
     CDS             4592..5248
                     /locus_tag="WIX18_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEZ5238799.1"
                     /translation="MTIKIILIDDHTLFRSGIKALLSRQHDFEVIGEAADGLSGIKMI
                     NRLQPDVVLLDLDMPGMNGREALSQIISINPQQAVIMLTVSEDNDDLTECMRIGARGY
                     LLKNINADFLLESIRKAAEGDNVFSPEMTAKLVKSLISPQPAQGTQALSSLTPRELEI
                     LGYLAAGHSNKIIARHLDLAESTVKVHVQNLLRKLNLSSRVQAAVYAIRHNVPQPVLE
                     "
BASE COUNT         1384 a         1566 c         1283 g         1332 t
ORIGIN      
        1 gttccgattc cgccgttatg tctgcctgcc ggacatacgt acgcattatt aacaaaagtt
       61 aaccgcgata ataccatctt tcacacgtca atctagtata tttcctaaaa tttccaacaa
      121 gaggaaaagc cgtgccactg cctgctccct gccgttttgc caaacctgcc gcctcttttt
      181 taagtatggc tttgctttcc tgtcagcttt cccacgccgc cacggcttat atccccccga
      241 acgattttca accgaactgc gacatacgcc gactcgggct gacccaaagt cagcacaatg
      301 agctgcgtaa aatccgcacc gccttcaaaa tggcgggcga cagggcgcgt ttgaaggtta
      361 tgcattccga acacagccgc cgccggtctg tcgtcgaaat catttcttcg gatgttttta
      421 atcggaacga ggcgcgcgat tatgtcgaaa gccgctattt gtccggtatg gattttgcgg
      481 tggacgaatt ggaaatccaa caccgcttct tccatatcct cacaccgcaa cagcagcaaa
      541 tgtggctttc ttcctgcctc aaataatccc cgaaacgctc acaacgcccg ttgtttcggc
      601 agcctgcccg cccagtcgca ggcaaactgc cacgcggaac gtcccgaacg gctgccccgc
      661 gtctgcgccc actgcaatgc cgccatctgt gcggtttcat catacggcac gccgaaatct
      721 tccagccaat tttgcaccgc cgccagataa tcgttttgat cgaacggata aaaactgagc
      781 cacaatccga atcggtcgga cagggatatt ttttcttcca ccgcttcttt ctgatggatt
      841 tccccccgca tccccgtcgt accggcattc tcgtcaaaat attcgggcat caggtgccgt
      901 ctgttggaag tcgcgtaaac caaaacgttg gcgcaacgtt gagacagacc gccgtctaac
      961 gcggttttca atgccttata ggtttcatcg ccgctttcaa acgacaaatc gtcgcaaaat
     1021 acgataaatt tttccggacg ttccttcaaa agcgtcaaca ggtaaggcag gccgattaaa
     1081 tcgcttttat cgacttcgat caggcgcaat cccttatccg catattcgtg tagcagggct
     1141 ttgaccagcg aggatttgcc tgttccgcgc gcgccgctca tcaatacatt gttcgcgggt
     1201 ctgccgacaa tgaactgttc ggtattacgc accagcaatt cggtttgcct gccgactccc
     1261 gccagcctta ccaagggaaa ggtgtgcgga tcgggcaagt gttccaaaaa accttttttg
     1321 cccgcactct gccagcggaa ggcaagcgcg ttccaatccg tatgcccggg ttcgggcgga
     1381 agcacggcat ccaaacgccg caaaacggca taggctttat cgagaaattc gttcaattcc
     1441 atctctacct cactttgcat atctttgcgc catcagccgt tcgacggtgt cgacgattgc
     1501 ctgcgtattc ggatcgattt cgatgttgat cctgtcgccg acctttctgc tgccgaacag
     1561 cgtccgttcc aaagtttcgg gaatcagatg gacattgaaa cggccgtctt cgactttgcc
     1621 tatggtcagg ctgcaaccgt ccaagccgac gaaccctttg gtcaggatat agggtttgag
     1681 ttcatgcggg agcgaaaacc aaaccgtgcg gttgaacccg tcccgttcga tttcgacaat
     1741 aggcacggtt gccataatgt gtccgctcat gacgtgtccg ccgatttcgt ctccgaaacg
     1801 cgccgcccgt tcgatgttga cgcaatcgcc ttccttcagc agccccaaat tggtttttgc
     1861 caaagtttcc gccattaaat cgaaactaac gcggtttcct tcgatttcgg taatcgtcag
     1921 gcagcagccg ttattggcaa ccgatgcgcc gcgttgcaga ttgtccgccg cctcttgcgg
     1981 aagctcgacg acataagtgt gaaatgcctc cgacgggcgg tggattgccg tcagttttcc
     2041 caagccttga acaatgcctg taaacataat cctgttttcc tgtgtcggta aaatggtgca
     2101 aattgtagca tctccccgcg aaaaatgccg tctgaaatgc cttcagacag cattatgcct
     2161 ccgattcggg caaaaaccgc ccggtatggc ttgacctttc ctttccacgc cggtcggcgg
     2221 tcttgccctt atccctcctg caaatcgatt tgcgtgttca agtcggcaaa atgcccgtca
     2281 aactcgaatc tgaccgaccg cgccctttgc tgctgcaacc agcttcttaa tgttttcata
     2341 cccgaaaaca gatagggaat cgcgctttgc agaatctgcg ggcggatata cataatgttg
     2401 tagtgcatcg ttatcggcgt ttccacataa tacgcattgc acaacggtgt gcgtttcgac
     2461 acggtttcaa accttgccac caaatcgtcc ggcagatacg gcatatcgca cggcacaacc
     2521 aaaagccagt cagcagtcgc caactgcaaa tcgttggctg cggtacacaa tgccgaaagc
     2581 gggccgaaat gctgccactg ccgtgcgtcc ggaaaaatat gcggacttct tcgagcatat
     2641 tcttccaaat tccggttggt gctgatggca aataaattca tattatctga attttatcat
     2701 aacatgattt aacactgaag cggtgcggat taagttttcc ttaaccaatt ctttctgagc
     2761 agttgtatct aatcccaaag aatgatattg tttgcattat ttagaacaat ttttcgccga
     2821 gcatgatact gccagcccgt ttttcagacg gcatcagcct ttccctacgc ctgaaactcc
     2881 tgaccggagt gtgggtcggg ttggcggcat tgtctgtcgt tttgacactg ctgctctctt
     2941 tgcgtctgga aaacgcggcc tccgtcatcg aagaggcggg caacttgaga atgcaggcat
     3001 accgtctggc atacatggcg ggtgaaggct cgccccgtgc gcaaattgac aatcaggttg
     3061 ccgaatttga aaaaagcctg aatcgtattt cacaaagtga tgccatccat ccgctgattc
     3121 cttcggacac ccctcttgct tatgatttga tacaatccat gctgattata gattggcagg
     3181 cacacatcct ccccccgctc cagtcctacc ggcgaccgac tcaggtcgat ctctaccgct
     3241 ttgccggaaa catcgaactg tttttgcagg cattggaaaa tgccaacgaa aaaaacacat
     3301 ggtggctcag gcgttttcaa tgggcaatta tgttgatgac gctggtgtcg tctgtactga
     3361 tgctgttttg gcaccagatt tgggttatcc ggccgctgca ggcgttaagg gaaggtgcgg
     3421 aacgcatcgg acggaggtgt ttcgatattc cggttcccga aggcggtacg ccggaattca
     3481 aacaggtcgg gcgttgtttc aatcaaatgg gcggcaggtt gaaaatttta tatgatgatt
     3541 tggaaggaca agtcgccgag cagacacgca gtctcgaaaa acaaaatcaa aacctgaccc
     3601 tgctgtacca aactacacgg gacctgcacc aatcctacat accgcaacag gctgcagaac
     3661 attttctaaa ccgtatcctg cccgccgtag gagcagattc cggcagagtt tgtttggacg
     3721 gcggatccga tgtttatgtt tccattcatc atgcggattg cggcacagca gcttcggatt
     3781 tggggaagta ccatgaggaa atcttcccca ttgagtacca gaacgaaaca ttgggcaggc
     3841 tgttgctcag ctttccaaac ggcatttctc ttgatgaaga cgaccgcatc ctgcttcaaa
     3901 cactaggcag gcaattgggc gtatcgcttg ccggcgcaaa acaggaggaa gaaaaacgcc
     3961 tgcttgcagt attgcaggaa cgcaacctga ttgcgcaagg attacatgac agcatcgcac
     4021 aagcattaac gttcctaaac ctacaggtac agatgctgga aaccgccttt gccgaaaaca
     4081 aacgggagga agccgcagaa aacatcggct tcatcaaaac aggcgtgcag gaatgttatg
     4141 aagatgtccg cgaactgctg ctcaacttcc gtaccaaaat cagcaataaa gaatttcccg
     4201 aagccgttgc cgacctattc gcccgcttta cgcaacaaac cgggataacg gtcgaaaccg
     4261 cctgggaaaa cggttcgttc ctgccgcctc aggaagcgca gctccaaatg atttttatcc
     4321 tgcaggaaag cctgtccaac atccgcaaac acgcccgcgc cacccatgta aaattcaccc
     4381 tttccgaaca cggcggacgc tttaccatga ccatccaaga caacggacaa ggtttcgaca
     4441 cggagaaaat aggagaaccc acgggcagcc atgtcggact gcacatcatg caggagcgtg
     4501 ccaaacgcat ccatgccgtt ttagaaatcc gttcccaagc tcaacaggga accaccgtct
     4561 cattgacggt tgcatctgaa gaaagcttga aatgaccatt aaaattatcc tgatagacga
     4621 ccataccctc ttccgcagcg gcattaaagc ccttttgtcg cgccaacatg attttgaggt
     4681 catcggcgaa gccgcagacg gcctctcggg cattaaaatg atcaaccggc tgcaacccga
     4741 tgtcgtcctg cttgaccttg atatgcccgg tatgaacgga cgcgaagcac tctcccaaat
     4801 catcagcatc aatccgcagc aggcagtgat tatgctgacc gtttccgaag acaacgacga
     4861 cttgaccgaa tgtatgcgca tcggcgcgcg cggctacctg ctgaaaaaca tcaacgccga
     4921 ctttctgctc gaaagcatac gcaaagccgc cgaaggcgat aatgtattct cgcccgagat
     4981 gaccgccaaa ctcgttaaaa gcctgatttc cccccaacct gcccaaggga cacaggcact
     5041 ctcctcactt acccctcgcg aactggaaat cttgggctat ctcgccgcag gacacagcaa
     5101 caaaatcatc gcccgccacc tcgatcttgc cgaatccacc gtcaaagtcc acgttcaaaa
     5161 cctgctccgc aaactcaacc tcagcagccg ggtgcaggcc gctgtttacg ccatccggca
     5221 caacgtcccc caacccgtgc tggaataagg cgggttcaga cggcatatta ggggttttaa
     5281 tccccgtacg gtcattcgga taacagacca cgcatgtaag tttatgcccc cataagtacg
     5341 cttggcatag cagtaatatt gttcggttta gtgttttccg tttgccccta tctgatactg
     5401 caatatcaac tatgccgtct gaaaacgcat catcatgata ttttcagacg gcataataaa
     5461 aagcggaaat actaatgcag ggtaaaatgt tccattccga atcccataaa tatacaatgg
     5521 cttatatcgt ttaagcatgt gtaacccacc ctcatatcaa tcaat
//
LOCUS       DAWITQ010000134         5481 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.134, whole genome shotgun sequence.
ACCESSION   DAWITQ010000134 DAWITQ010000000
VERSION     DAWITQ010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5481)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5481)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5481
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.134"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            65..490
                     /locus_tag="WIX18_001724"
                     /pseudo
     CDS             65..490
                     /locus_tag="WIX18_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701621.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NosR"
     gene            496..1725
                     /locus_tag="WIX18_001725"
                     /pseudo
     CDS             496..1725
                     /locus_tag="WIX18_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777561.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase family maturation
                     protein NosD"
     gene            1783..2403
                     /locus_tag="WIX18_001726"
     CDS             1783..2403
                     /locus_tag="WIX18_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ5238800.1"
                     /translation="MTTHHVELRKVTKRFGAQKAVNQVDLVLKAGESVGLAGHNGAGK
                     STIMKLILGLITPTEGEVMLLGERTGSKAGARLRSQIGYLPETVALHPSLTGIETLDF
                     YAKLKKQPLTQNRGLLERVGISQAAHRRVGTYSKGMRQRLALAQALLGEPKVLLFDEP
                     TTGLDPASRQMFYEVVRELNGRGATVLLSTHALAELDGHADRIIVD"
     gene            2414..2545
                     /locus_tag="WIX18_001727"
                     /pseudo
     CDS             2414..2545
                     /locus_tag="WIX18_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688339.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            2542..3036
                     /locus_tag="WIX18_001728"
     CDS             2542..3036
                     /locus_tag="WIX18_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase accessory protein NosL"
                     /protein_id="HEZ5238801.1"
                     /translation="MKKTLLAIVAVSALSACRQAEEGSPPLPRQISDRSVGHYCSMNL
                     TEHNGPKAQIFLNGKPDQPVWFSTIKQMFGYTKLPEEPKGIRVIYVTDMGNVTDWTNP
                     NADTEWMDAKKAFYVIDSGFIGGMGAEDALPFGNKEQAEKFAKDKGGKVVGFDDMPDT
                     YIFK"
     gene            complement(3124..4785)
                     /locus_tag="WIX18_001729"
     CDS             complement(3124..4785)
                     /locus_tag="WIX18_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein-ubiquinone
                     oxidoreductase"
                     /protein_id="HEZ5238802.1"
                     /translation="MTESITRDSMQYDVVIVGAGPSGLSAAIKLKQLAEQNGREISVC
                     VVEKGSEAGAHSLAGAVIDPIALNELIPDWKEKGAPLTRTVTQDKVLFLTEKKAFNLP
                     ITPNFDNHGNYIVSLGEVVRWLAEQAENLGVEIYPGFAAAEVLYHEDGSVKGIATGNM
                     GIGKDGEPTDSFQPGMELWAQQTLFAEGCRGSLSKQVIERFQLDQNSQPQTYGLGIKE
                     IWEVPSEKHQPGLVVHSAGWPLDSKTYGGAFVYHFDDNKVAVGFVVGLDYQNPYLSPF
                     EEFQRFKTHPEIRKTFEGGRRIAYGARSLIEGGLQSLPKLSFKGGVLIGDAAGFLNMP
                     RIKGIHTAMKSAMLAAEAVFPLLENLEEVENFDSGKEAADYQQRFEQSWLYQELYAAR
                     NVRPSFKWGVYLGSIYTGIDQMIFRGKAPWTLKHHGKDNEQLKKAAACKPIDYPKPDG
                     VLTFDRLSSVFLANLAHEENQPDHLVLNNPQTMIDVNYKEYASPETRYCPAGVYEIVE
                     ENGNPRLQINAANCVHCKTCDIKDPTQNITWICPEGASGPNYGGM"
     gene            complement(4915..5457)
                     /locus_tag="WIX18_001730"
     CDS             complement(4915..5457)
                     /locus_tag="WIX18_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEZ5238803.1"
                     /translation="MQSWKERRDFNIVKQDLDFSCGAASVVTLLNNFYGQKLTEEDVL
                     KKLDKEQMPASFEDMRRIMPDLGFEAKGYALSFEQLAQLQIPVIVYLKYRKDDHFSVL
                     RGIDGNTVLLADPSLGHVSMSRAQFLDAWQTREGNLAGKILAVVPKGRDAGGDKAFFT
                     RSPKRQTEFAVGQVKWWRAY"
BASE COUNT         1308 a         1478 c         1398 g         1297 t
ORIGIN      
        1 tatcccgtat gcggattggt tttaagattt gtaaatttaa tttgcatcaa aaaatcgccg
       61 atagatgatt catataatat caatattaaa gagtatcggt atatcgggga tagtcatgtc
      121 ctgtttttca atcaaacgta tgtccgcgtt tcgggcgcgg ataacggcgt tttttgccgc
      181 ctttgtcttt ttgacggcgg cactgcccgc ttatgcggag cgtctgcctg attttctggc
      241 gaaaatacag ccttcggaaa tttttccggg tgcggaccgt tacggcaagc cggaaggtaa
      301 gcctatggtt gcccgcgttt acaaaggcga tgagcagttg ggcttggtct atatcacgac
      361 cgatgcggtc aatacgcgcg gttattcgag caaaccgatt gatacgctga tggcgttggc
      421 taaagacggt acgatagccg gagcgaaatt ggttgatcac catgagtcga ttatgctgat
      481 cggtatcccg catttgcccg cgcccgggcg ggcgatacgc tcaaactggc ttccggcgta
      541 tatcaaacca aactttatat cgacaaaccg attacgattg aagggcctgc cgaccgttct
      601 gcaaccatcg aaggggacag gagcgggcgt accatagccg tacacgcgcc ggacgtaacg
      661 ctccgcaacc tgaccgttac ccgttccggc atgagcctgc cagcaatgga tgccggtatt
      721 tatctcgaag aaaccgctcc gcacgccctg attgaacaca ataatatttt ggataattcg
      781 gtcggcgtct atctgcatgg ttcttccgaa gcgatggtgc gcgagaacaa aatcgtcggc
      841 gacgcgactt tgcgcgtgaa cgagcgcggc aacggcgtta ccgtttggaa cgcgcccggt
      901 gcgcaagtcg tcggcaacga catttccaaa gggcgggacg gcattttttc caacaccagc
      961 acatataaca cctacaaaaa caaccgcttc agcgatttgc gtttcgccgt ccactatatg
     1021 tacaccaacg acagcgaaat cagcggcaat atttccgtgg gcaacaatat gggctatgtg
     1081 ctgatgtttt ccgagcggct caaagtattc gacaatatcg ccgtcggcag ccgcgatcag
     1141 ggcattatgc tcaactatgt caactattcc gatattcacg acaacattat caacaaagcg
     1201 ggcaagtgcg tatttgccta taatgccaac tacgataaac ttttcgccaa tcattttgaa
     1261 aactgccaaa tcggcataca ctttaccgcc gccatcgaag gcacgtccct gcacgacaat
     1321 tccttcatca acaacgaaag ccaggtcaaa tacgtcagca cgcgctttct cgactggagc
     1381 gagggcggac acggcaacta ttggagcgac aacagcgcgt tcgatttgaa cggcgacggc
     1441 ttcggcgaca gcgcgtaccg gcccaacggc atcatcgacc aaatcatctg gcgcgcgccc
     1501 gtatcgcgtc tcttgatgaa cagtcccgca atcagcatcg tcaaatgggc gcaggcgcag
     1561 tttcccgccg ttctgcctgg cggcgtggtg gacagcaaac cgctgatgaa gccttatgcc
     1621 cccaaaattc aaacccgtta tcaggcgatg aaggacgagt tgctcaaaga agccgaaacg
     1681 cggcagtcgg aatggggcag ggcggaaaac gggtctttga actagtctgt ttcagacggc
     1741 atccggattc aaatgccgtc tgaaaacaca aaaggaacaa ccatgaccac acatcatgtc
     1801 gaattgagga aggtaaccaa acggttcggg gcgcaaaaag ccgttaacca agtcgatttg
     1861 gttttgaagg caggagaaag cgtcgggctt gccggacaca acggcgcggg caagtccacc
     1921 attatgaagc tgatactcgg gctgattacc ccgaccgaag gcgaagtgat gcttttgggc
     1981 gaacgtaccg gcagcaaagc gggggcgcgg cttcgcagcc aaatcggcta cctgcccgaa
     2041 actgttgcgt tgcacccttc gctgaccggc atcgaaacgc tggattttta tgccaaactt
     2101 aaaaaacagc cgctcacgca gaatcggggg ctgctcgagc gcgtcggcat ttcacaggcg
     2161 gcacaccgcc gcgtcggcac ttattctaaa gggatgcgcc aacgccttgc cttggcacaa
     2221 gccctgctgg gcgagcccaa agtcctgctg tttgacgaac cgacaaccgg cctcgaccct
     2281 gcatcaaggc aaatgtttta cgaagtcgtg cgcgaactca acgggcgcgg cgcgaccgta
     2341 ttgctcagta cccacgccct tgccgagttg gacgggcacg ccgaccgcat tatcgtggat
     2401 taaatttaat ccactatatg cgggtatggc gggtttgagc ggacaaatca gcctgaccgt
     2461 ccccgttttg ctgaccgctc aggttttatg ggttatcatt ccgcttgttt tggcagccgg
     2521 aatttttaga aagcgacaaa tatgaaaaaa accctgttgg caattgttgc cgtttccgcc
     2581 ttaagtgcct gccggcaggc ggaagaggga tcgccgcctt taccccggca gattagcgac
     2641 cgttcggtcg gacactattg cagtatgaac ctgaccgaac acaacggccc caaagcccag
     2701 attttcttga acggcaaacc cgatcagccc gtttggttct ccaccatcaa gcagatgttc
     2761 ggctatacca agctgcccga agagcctaaa ggcatccgcg tgatttacgt taccgatatg
     2821 ggcaatgtta ccgattggac gaatcccaat gccgacacgg agtggatgga tgcgaaaaaa
     2881 gccttttacg tcatcgacag cggctttatc ggcggtatgg gtgcggaaga cgcgctgccg
     2941 ttcggcaaca aagagcaggc tgagaaattt gcaaaggata aaggcggtaa ggttgtcggt
     3001 ttcgacgata tgcctgatac ctatattttc aaataatatt gaaaaaaccg gccgaaactt
     3061 taaaaacgag tttcggtcgg tttttctttt cttgttcggt atagtgtcgg caggaaagaa
     3121 ccttcacatc ccgccgtaat tcggcccgct cgcgccttcg gggcaaatcc aagtgatgtt
     3181 ttgcgtcggg tctttgatat cgcaggtttt gcagtgcacg cagtttgccg cgttgatttg
     3241 caggcgcgga ttgccgtttt cttcaacaat ttcgtacacg ccggccggac aatagcgcgt
     3301 ttcgggcgag gcgtattctt tgtagttcac gtctatcatc gtttgcggat tgttcagcac
     3361 caaatggtcg ggctggtttt cttcgtgcgc gagattggca aggaagacgc tgctcaagcg
     3421 gtcgaaggtc aacacgccgt cgggtttcgg ataatcaatc ggcttgcacg cggcggcttt
     3481 tttgagctgc tcgttgtctt tgccgtgatg tttcaaggtc cacggggctt tgcctctgaa
     3541 aatcatctga tcgatgccgg tgtagattga gccgaggtaa acgccccatt tgaatgacgg
     3601 acggacattg cgcgcggcgt aaagctcttg atacagccag ctttgttcaa aacgttgctg
     3661 ataatccgcc gcctctttgc cgctgtcgaa gttttccact tcttcaaggt tttccaacaa
     3721 ggggaacacg gcttctgcgg cgagcatggc ggatttcatc gcggtatgaa tgcctttgat
     3781 gcgcggcata ttgaggaagc ctgccgcgtc gccgattaaa acgccgcctt tgaacgagag
     3841 cttcggcaaa ctttgcaaac cgccttcaat cagcgaacgc gcgccgtaag cgatgcggcg
     3901 gccgccttca aaggttttgc ggatttcggg atgggttttg aaacgttgga actcttcaaa
     3961 cggcgacaga taagggtttt gatagtccaa accgaccacg aaaccgacgg cgactttgtt
     4021 gtcatcgaaa tggtaaacaa acgcgccgcc gtaggttttg ctgtccagcg gccagcccgc
     4081 gctgtgcacc accaagccgg gctgatgttt ttcagacggc acttcccaaa tttctttgat
     4141 gcccaagccg taagtttgcg gctggctgtt ttggtcgagt tggaaacgtt cgatgacttg
     4201 tttggaaagc gaaccgcgac aaccttcggc aaacagagtt tgctgcgccc aaagctccat
     4261 gccgggctgg aaactgtcgg tcggctcgcc gtctttgcca atgcccatat tgccggttgc
     4321 aatgcctttg accgaaccgt cttcgtgata cagcacttcg gcggcggcaa agcccggata
     4381 aatttccacg cccaaatttt ccgcctgctc cgccaaccag cgcacgactt cgcccaagct
     4441 gacgatgtag ttgccgtgat tgtcgaaatt tggggtaata ggcagattga acgctttttt
     4501 ctcagtcagg aacaacactt tgtcctgcgt taccgtacgc gtcagcggcg cgcctttttc
     4561 tttccagtcg ggaatcaact cattcagcgc aatcggatcg ataaccgcgc ccgccagcga
     4621 atgtgcaccc gcctccgaac ctttctccac cacgcaaacg ctgatttcgc gcccattttg
     4681 ttcggcaagc tgcttgagtt tgatggcggc ggacaaaccc gatgggcctg cgccgacaat
     4741 cacgacatcg tattgcatac tgtcgcgggt gatggattct gtcatggcgg ttcctgtgta
     4801 tttattattg aattgcaaat ccgtaattat acaacgagaa catatagtta ccaaatacaa
     4861 caaaggtcgt ctgaaaacca tattttcggt tttcagacga cctttgtcga aatttcaata
     4921 agcacgccac cattttacct gtccgaccgc aaactccgtc tgacgtttcg gactgcgtgt
     4981 gaaaaacgcc ttatccccgc cggcatccct ccctttcggc acaaccgcca aaatcttacc
     5041 tgccaaattt ccctcacggg tttgccaagc atccaaaaac tgcgccctgc tcattgaaac
     5101 atgacccagc gacgggtcgg caagcaaaac cgtattgccg tctataccgc gcaataccga
     5161 gaaatgatca tccttgcggt atttcagata cacgatgacg gggatttgca actgtgcaag
     5221 ctgctcgaaa gacagggcat agcctttcgc ttcaaaaccc aaatcaggca taatgcgccg
     5281 catatcctca aacgacgcgg gcatctgctc cttatccagt ttttttaaca cgtcctcttc
     5341 cgtcagcttt tgcccgtaaa aattgttcaa aagcgtcacc accgaagccg ccccgcagga
     5401 aaaatccaaa tcctgcttta caatattgaa atcgcgcctt tctttccaac tctgcacttt
     5461 gatttttcca taagcaacag g
//
LOCUS       DAWITQ010000135         5480 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.135, whole genome shotgun sequence.
ACCESSION   DAWITQ010000135 DAWITQ010000000
VERSION     DAWITQ010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5480)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5480)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5480
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.135"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            207..2339
                     /locus_tag="WIX18_001731"
     CDS             207..2339
                     /locus_tag="WIX18_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HEZ5238804.1"
                     /translation="MNNPLVNQAAMVLPVFLLSACLGGGGGSFDLDSVDTEAPRPAPK
                     YQDVSSEKTASPKDQGGYGFAMRLKRRNWHTQANPKEDEIKLSENDWEATGLPGNPKN
                     LPERQKSVIEKVETDDGSNIYSSPYLTQSNHPNGNTGNGTNLPKNEVTDYKDFKYVYS
                     GWFYKHAKRNFDITNKIVRQGDDGYIFYHGKEPSRQLPVSEKITYKGVWHFVTDTKNG
                     QKFYDIIQPSKKQGDRYSGFSGDDDEQYSNKNDMLKGDQEGYGFTSNLEVDFNNKKLT
                     GKLIRNDKVTNATTGGKHATQYYSLEAQVTGNRFNGKATATDKPGNGETKQHPFVSDS
                     SSLSGGFFGPKGEELGFRFLSDDKKVAVVGSAKTKDKTENGAAASGGTGAAASGGVAG
                     TSSENSKLTTVLDAVELTHGDTAIKNLDNFSNAAQLVVDGIMIPLLPKDSESGNNQAN
                     QGTNGGTAFTRKFDYTPKSDEKDAQAGTAANGDQAASNTAGDANGKTKTYAVEVCCSN
                     LNYLKYGLLTRKTAGNTGEDGNGSPTAAAQTDAQSMFLQGERTDEKEIPNDQNIVYRG
                     SWYGHIANGTSWSGNASNATSGNKADFTVNFGEKKINGTLTAENRQAATFTIEGTIQG
                     NGFSGTAKTADSGFDLDQSNTTGTPKAYITDAKVQGGFYGPKAEELGGWFAYPGNSQA
                     QPPASGSGASAANSATVVFGAKRQQLVQ"
     gene            2426..5188
                     /gene="tbpA"
                     /locus_tag="WIX18_001732"
     CDS             2426..5188
                     /gene="tbpA"
                     /locus_tag="WIX18_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein TbpA"
                     /protein_id="HEZ5238805.1"
                     /translation="MQQQHLFRLNILCLSLMTALPAYAENVQAGQAQEKQLDTIQVKA
                     KKQKTRRDNEVTGLGKLVKTADTLSKEQVLDIRDLTRYDPGIAVVEQGRGASSGYSIR
                     GMDKNRVSLTVDGLAQIQSYTAQAALGGTRTAGSSGAINEIEYENVKAVEISKGSNSV
                     EQGSGALAGSVAFQTKTADDVIGEGRQWGIQSKTAYSGKNRGLTQSIALAGRIGGAEA
                     LLIHTGRRAGEIRAHEDAGRGVQSFNRLVPVEDDSKYAYFIVEEECESKNYETCKANP
                     KKDVVGKDERQTVSTRDYTGPNRFLADPLSYESRSWLFRPGFRFENKRHYIGGILEHT
                     QQTFDTRDMTVPAFLTKAVFDENRKYGPIRGNGKYAGDHKYSGLITNGDNGALVGAEY
                     GTGVFYDETHTKSRYGLEYVYTNADKDTWADYARLSYDRQGIGLDNHFQQTHCSADGS
                     DKYCRPSADKPFSYYKSDRVIYGESHRLLQAAFKKSFDTAKIRHNLSVNLGFDRFGSN
                     LRHQDYYFQNAKRAYSLKTPPKNGNGGSNANPNANPNGGKDKPYWVSIGGGNVVTGQI
                     CLFGNNTYTDCTPRSINGKSYYAAVRDNVRLGRWADIGAGLRYDYRSTHSDDGSVSTG
                     THRTLSWNAGIVLKPADWLDLTYRTSTGFRLPSFAEMYGWRAGVQSKAVKIDPEKSFN
                     KEAGIVFKGDFGNLEASWFNNAYRDLIVRGYEAQIKDGKETAKGDPAYLNAQSARITG
                     INILGKIDWNGVWDKLPEGWYSTFAYNRVHVRDIKKRADRTDIQSHLFDAIQPSRYVV
                     GLGYDQPEGKWGVNGMLTYSKAKEITELLGSRALLNGNSRNTKATARRTRPWYIVDVS
                     GYYTIKKHFTLRAGVYNLLNYRYVTWENVRQTAGGAVNQHKNVGVYNRYAAPGRNYTF
                     SLEMKF"
BASE COUNT         1571 a         1394 c         1389 g         1126 t
ORIGIN      
        1 ccggattccc actttcgtgg gaatgacggg atatacgtgg gaatgacggg atataggttt
       61 ccgtgcggac gcgttcggat tcacgactgc gcgggaatga cgggattttg gtgtattccc
      121 taaaaaaaaa taaaaaagca tttgcaaatt tattaaaaat aaataaaata ataatcttta
      181 tcattcttta attgaattag gtttatatga acaatccatt ggtaaatcag gctgctatgg
      241 tgctgccggt gtttttgttg agtgcttgtt tgggcggagg cggcggcagt ttcgatcttg
      301 attctgtcga taccgaagcc ccgcgtcccg cgccaaagta tcaagatgtt tcttccgaaa
      361 aaaccgcaag cccaaaagac caaggcggat acggttttgc aatgcgcctc aagcggcgga
      421 attggcatac gcaggcaaat cctaaagaag atgagataaa actttctgaa aatgattggg
      481 aggcgacagg attgccgggc aatcccaaaa acttacctga gcgacagaaa tcggttattg
      541 aaaaagtaga aacagacgac ggcagcaata tttattcttc cccctatctc acgcaatcaa
      601 accatccaaa cggcaacact ggcaacggta caaacctgcc aaaaaacgaa gtaacagatt
      661 ataaagattt caaatatgtt tattccggct ggttttataa acatgctaaa cgaaattttg
      721 atattacaaa taaaattgta cgacaaggcg acgacggtta tatcttctat cacggcaaag
      781 aaccttcccg acaacttccc gtttctgaaa aaattaccta taaaggtgtg tggcattttg
      841 taaccgatac gaaaaatgga caaaaatttt atgacattat ccagccttca aaaaaacaag
      901 gcgacaggta tagcggattt tctggcgatg atgatgaaca atattctaat aaaaacgaca
      961 tgctgaaagg tgatcaagag ggttatggtt ttacctcaaa tttagaagtg gatttcaata
     1021 ataaaaaatt gacgggtaaa ttgatacgca atgataaagt tacaaacgct actactggcg
     1081 gcaaacatgc cacccaatat tacagccttg aggctcaagt aacaggcaac cgctttaacg
     1141 gcaaggcaac ggcaaccgac aaacccggca acggcgaaac caaacaacat ccctttgttt
     1201 ccgactcgtc ttctttgagc ggcggctttt tcggcccgaa gggtgaggaa ttgggtttcc
     1261 gctttttgag cgacgataaa aaagttgccg ttgtcggcag cgcgaaaacc aaagacaaaa
     1321 cggaaaatgg cgcggcggct tcaggcggca caggtgcggc agcatcgggc ggtgtggcag
     1381 gcacgtcgtc tgaaaacagt aagctgacca cggttttgga tgcggtcgag ctgacgcacg
     1441 gcgacacagc aatcaaaaat ctcgacaact tcagcaacgc cgcccaactg gttgtcgacg
     1501 gcattatgat tccgctcctg cccaaggatt ccgaaagcgg gaacaatcaa gccaatcaag
     1561 gtacaaacgg cggaacagcc tttacccgca aatttgatta cacgccgaaa agcgatgaaa
     1621 aagacgccca agcaggtacg gcggcgaatg gcgatcaagc cgcttcaaat acggcaggtg
     1681 atgccaatgg caaaacaaaa acctatgcag tcgaagtctg ctgttccaac ctcaattatc
     1741 tgaaatacgg gttgctgaca cgcaaaaccg ccggcaacac gggggaagac ggcaacggca
     1801 gcccaaccgc cgccgcccaa acggacgcgc agagtatgtt cttacaaggc gagcgcaccg
     1861 atgaaaaaga gattccaaac gaccaaaaca tcgtttatcg ggggtcttgg tacgggcata
     1921 ttgccaacgg cacaagctgg agcggcaatg cttccaatgc aacgagtggc aacaaggcgg
     1981 actttaccgt gaattttggc gagaaaaaaa ttaacggaac gttaaccgct gaaaacaggc
     2041 aggcggcaac ctttaccatt gagggaacga ttcagggcaa cggtttttcc ggtacggcaa
     2101 aaactgctga ctcaggcttt gatctcgatc aaagcaatac caccggcacg cctaaggcat
     2161 atatcacaga tgccaaggtg cagggcggtt tttacgggcc taaagccgaa gagttgggcg
     2221 gatggtttgc ctatccgggc aacagtcagg cgcagccgcc cgcttcgggg tcgggcgcat
     2281 cagccgccaa cagcgcgacc gtggtattcg gtgcgaaacg ccaacagctt gtgcaataag
     2341 cacggctgcc gaacaattga gaataaggct tcagacggca tcgctccttc cgatgccgtc
     2401 tgaaagcgaa gagtagggaa acgctatgca acagcaacat ttgttccgat taaatatttt
     2461 atgcctgtct ttaatgactg cgctgcccgc ttatgcagaa aatgtgcaag ccggacaagc
     2521 acaggaaaaa cagttggata ccatacaggt aaaagccaaa aaacagaaaa cccgccgcga
     2581 taacgaagta accggtttgg gcaaattggt caaaaccgcc gacaccctca gcaaggaaca
     2641 ggtactcgac atccgcgacc tgacgcgtta cgaccccggc atcgccgtcg tcgaacaggg
     2701 gcgcggcgca agctcgggtt attcgatacg cggtatggat aaaaaccgcg tttccttgac
     2761 ggtggacggc ttggcgcaaa tacagtccta caccgcgcag gcggcattgg gcgggacgag
     2821 gacggcgggc agcagcggcg caatcaatga aatcgagtat gaaaacgtca aagctgtcga
     2881 aatcagcaaa ggctcaaact cggtcgaaca aggcagcggc gcattggcgg gctcggtcgc
     2941 atttcaaacc aaaaccgccg acgatgttat cggggaaggc aggcagtggg gcattcagag
     3001 taaaaccgcc tattccggca aaaaccgggg gcttacccaa tccatcgcgc tggcggggcg
     3061 catcggcggt gcggaggctt tgctgatcca caccggccgg cgcgcggggg aaatccgcgc
     3121 ccacgaagat gccggacgcg gcgttcagag ctttaacagg ctggtgccgg ttgaagacga
     3181 cagcaaatac gcctatttca tcgttgaaga agaatgcgaa agcaaaaatt acgaaacgtg
     3241 taaagcgaat ccgaaaaaag atgttgtcgg caaagacgaa cgtcaaacgg tttccacccg
     3301 agactacacg ggacccaacc gcttccttgc cgatccgctt tcatacgaaa gccgatcgtg
     3361 gctgttccgc ccgggttttc gttttgaaaa caaacggcac tacatcggcg gcatactcga
     3421 acacacgcaa caaactttcg acacgcgcga tatgacggtt ccggcattcc tgaccaaggc
     3481 ggtttttgat gaaaatagaa aatacggacc gataagaggc aacggcaaat acgcgggcga
     3541 ccacaaatac agcgggctga ttaccaacgg cgacaacggt gcgctggtgg gcgcggaata
     3601 cggtacgggc gtgttttacg acgagacgca caccaaaagc cgctacggtt tggaatatgt
     3661 ctataccaat gccgataaag acacttgggc ggattatgcc cgcctctctt acgaccggca
     3721 gggcatcggt ttggacaacc attttcagca gacgcactgt tctgccgacg gttcggacaa
     3781 atattgccgt ccgagtgccg acaagccgtt ttcctactac aaatccgacc gcgtgattta
     3841 cggggaaagc cacaggctct tgcaggcggc attcaaaaaa tccttcgata ccgccaaaat
     3901 ccgccacaac ctgagcgtga atctcggttt tgaccgcttt ggctctaatc tccgccatca
     3961 ggattattat tttcaaaatg ccaaacgcgc ctattcgttg aaaacgcctc ctaaaaacgg
     4021 caacggcggc tcaaacgcca accccaacgc caaccccaac ggcggcaagg acaaacccta
     4081 ttgggtcagc ataggcgggg gaaatgtggt tacggggcaa atctgcctct ttggcaacaa
     4141 tacttatacg gactgcacgc cgcgcagcat caacggcaaa agctattacg cggcagttcg
     4201 ggacaatgtc cgtttgggca ggtgggcgga tatcggcgcg ggcttgcgct acgactaccg
     4261 cagcacgcat tcggacgacg gcagcgtttc caccggcacg caccgcaccc tgtcctggaa
     4321 cgcaggcatc gtcctcaaac ctgccgactg gctggatttg acttaccgca cttcaaccgg
     4381 cttccgcctg ccttcgtttg cggaaatgta cggctggcgg gcgggtgttc aaagcaaggc
     4441 ggtcaaaatc gatccggaaa aatcgttcaa caaagaagcc ggcatcgtgt ttaaaggcga
     4501 tttcggcaac ttggaggcaa gttggttcaa caatgcctac cgcgatttga ttgtccgggg
     4561 ttatgaagcg caaattaaag acggcaaaga aacagccaaa ggcgacccgg cttacctcaa
     4621 tgcccaaagc gcgcggatta ccggcatcaa tattttgggc aaaatcgatt ggaacggcgt
     4681 atgggataaa ttgcccgaag gttggtattc tacatttgcc tataatcgtg tccatgtccg
     4741 cgacatcaaa aaacgcgcag accgcaccga tattcaatca cacctgtttg atgccatcca
     4801 accctcgcgc tatgtcgtcg gcttgggcta tgaccaaccg gaaggcaaat ggggtgtgaa
     4861 cggtatgctg acttattcca aagccaagga aatcacagag ttgttgggca gccgggcttt
     4921 gctcaacggc aacagccgca atacaaaagc caccgcgcgc cgtacccgcc cttggtatat
     4981 tgtggatgtg tccggttatt acacgattaa aaaacacttc accctccgtg cgggcgtgta
     5041 caacctcctc aactaccgct atgttacttg ggaaaatgtg cggcaaactg ccggcggcgc
     5101 agtcaaccaa cacaaaaatg tcggcgttta caaccgatat gccgcccccg gtcgcaacta
     5161 cacatttagc ttggaaatga agttttaaac gtccaaacgc cgcaaatgcc gtctgaaagg
     5221 cttcagacgg cattttttta cacaattccc accgtttccc atcatccccg acaataccgt
     5281 aatcttgaaa cccgtcattc ccgagcaggc gggaatccag tccgttcggt ttcggttttt
     5341 ttgaggtttc gggtaactct aaaccgtcat tttctcgaaa gcggaaaatc aaaaacagaa
     5401 atctaaaatc ccgtcattcc cgcgcaggcg ggaatctaga cattcaatac taaggcaatt
     5461 tattgaaaat gactgaaact
//
LOCUS       DAWITQ010000136         5457 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.136, whole genome shotgun sequence.
ACCESSION   DAWITQ010000136 DAWITQ010000000
VERSION     DAWITQ010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5457)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5457)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5457
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.136"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..891)
                     /gene="mafA"
                     /locus_tag="WIX18_001733"
     CDS             complement(<1..891)
                     /gene="mafA"
                     /locus_tag="WIX18_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HEZ5238806.1"
                     /translation="MQARLLIPILFSVFILSACGTLTGIPSHGGGKRFAVEQELVAAS
                     ARAAVKDMDLQALHGRKVALYIATMGDQGSGSLTGGRYSIDALIRGEYINSPAVRTDY
                     TYPRYETTAETTSGGLTGLTTSLSTLNAPARSRTQSDGSGSRSSLGLNIGGMGDYRNE
                     TLTTNPRDTAFLSHLVQTVFFLRGIDVVSPANADTDVFINIDVFGTIRNRTEMHLYNA
                     ETLKAQTKLEYFAVDRTNKKLLIKPKTNAFEAAYKENYALWMGPYKVSKGIKPTEGLM
                     VDFSDIRPYGNHTGNSAPSVE"
     gene            complement(1075..1794)
                     /locus_tag="WIX18_001734"
     CDS             complement(1075..1794)
                     /locus_tag="WIX18_001734"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEZ5238807.1"
                     /translation="MTQQIKYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVK
                     MGVQVGIVVGGGNIFRGVSAQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARV
                     QSALSMQQIAETYARPKAIQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVML
                     KATNVDGVYTADPKKDSSATRYETITFDEALLKNLKVMDATAFALCRERKLNIVVFGI
                     AKEGSLKRVVTGENEGTLVHC"
     gene            complement(2013..2867)
                     /locus_tag="WIX18_001735"
     CDS             complement(2013..2867)
                     /locus_tag="WIX18_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HEZ5238808.1"
                     /translation="MAEITAKMVADLRAATGLGMMECKKALVEAEGNFDKAEEILRIK
                     SGAKAGKLAGRTAAEGVLAYAINGNVGALVEVNCETDFVAKDAGFVEFANFVAKTAAE
                     KKPASVEELSELVEAERKAIIAKLGENMSVRRFQVIDTANQLVAYIHGALATEGVLVE
                     YKGSEDVARKIGMHIVAAKPQCVSEAEVDAETVEKERHIYTEQAIASGKPADIAAKMV
                     EGRIRKFLAEITLNGQAFVMNPDQTVAQFAKENGTEVVSFVRYKVGDGIEKAVVDYAA
                     EVAAAAKV"
     gene            complement(2996..3724)
                     /gene="rpsB"
                     /locus_tag="WIX18_001736"
     CDS             complement(2996..3724)
                     /gene="rpsB"
                     /locus_tag="WIX18_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEZ5238809.1"
                     /translation="MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLE
                     KTLPMFQDAQEAIRRLVANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLT
                     NYKTVKQSIKRLEEKTAALENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDA
                     IFVIDTGYQKGTLVEAEKLGIPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIA
                     DAVLEGKNQALQETVAAAQEAAAE"
     gene            complement(3901..4134)
                     /locus_tag="WIX18_001737"
     CDS             complement(3901..4134)
                     /locus_tag="WIX18_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238810.1"
                     /translation="MWHIVAIGYLFVAVMYSAAQPSIARALIYLVFWAVLPTVFTVFV
                     VTVRRRNRLMKQQEQAEFEQQRAQRQKDSGTKP"
     gene            4212..4793
                     /locus_tag="WIX18_001738"
     CDS             4212..4793
                     /locus_tag="WIX18_001738"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEZ5238811.1"
                     /translation="MRNEEKRALRRELRGRRSQMGRDVRAAATVKINRLLKRYIKHGR
                     KIGVYWPMGKELRLDGFVRAAQKRGAKLYLPYIEPRSRRMWFTPYPESGMERERIRGR
                     ARLNVPQFAGRKIRVHGLSVLLVPLVGIDREGYRLGQAGGYYDATLAAMKYRLQAKTV
                     GVGFACQLVDRLSVEAHDLPLDGFVSEAGILCF"
     gene            4854..5444
                     /locus_tag="WIX18_001739"
     CDS             4854..5444
                     /locus_tag="WIX18_001739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ5238812.1"
                     /translation="MSEKIILPVLSLGGVRLEPLDVHHETGLREAVCDGEVWKLGVTS
                     APHPDRVADYIGTALATRLAFAVVDEEAGRVVGTTAYYHFEPQIPRLDIGFTWYAASA
                     RRTRINTCCKIMLLDYAFDVLACRCVGWRTDILNLASQRAIERLGAEKDGVLRMHMLR
                     KDGSVRDTVVYSMLREDWCKNREILTGRLAGYGVQV"
BASE COUNT         1216 a         1244 c         1524 g         1473 t
ORIGIN      
        1 ctctacggat ggggcggagt tacccgtatg attgccgtat ggtcggatat cggagaaatc
       61 gaccattaat ccttccgtcg gtttaattcc tttgcttact ttatacggcc ccatccacaa
      121 tgcgtaattt tctttatagg cagcttcaaa cgcattggtt ttgggtttga tgagcaattt
      181 tttattggtt ctgtctactg cgaaatattc cagttttgtt tgggctttca gtgtttcggc
      241 attgtatagg tgcatttcgg ttctgttgcg tatcgttccg aatacgtcga tgttaataaa
      301 cacatctgta tcggcattgg caggagaaac aacgtctatg ccgcgcagga aaaatacggt
      361 ctgtaccaag tgggaaagaa aggcagtgtc gcgcgggtta gtcgtcaagg tttcatttcg
      421 ataatccccc atcccgccaa tatttaagcc cagactgctc ctacttccgc taccgtctga
      481 ttgggtgcgc gagcgtgcag gggcattaag tgtagataaa gaagtggtta aacctgtcaa
      541 accgcctgat gttgtttcag cggtggtttc gtaacgtgga taggtgtaat cggtacggac
      601 ggcagggctg tttatgtatt cgccacgaat cagtgcatca atggagtagc gaccccctgt
      661 caaactgcct gaaccttggt cgcccatagt tgcaatgtac aatgcaactt ttcgtccgtg
      721 taatgcctgt aaatccatgt ctttaacggc agctctggca gaagcggcca caagttcttg
      781 ttcgaccgca aagcgtttac ctccgccatg cgatggaata cctgtcagtg tcccgcaggc
      841 ggataaaata aaaactgaaa aaagaatagg tatcagcagc cgtgcttgca tagattttct
      901 cctttgatga aaaacaaatt gtatcaaaat tgtaaatata gtggattaaa tttaaaccag
      961 tacggcaagg cgaggcaacg ccgtactggt ttaaatttaa tccactataa tctccatata
     1021 ataaatggct gtctgaagcc catatgcgac tatatctgcc gacactatgg tcaatcagca
     1081 gtgaaccagc gtaccttcgt tttcaccggt tactacacgt ttgagcgagc cttctttagc
     1141 aatgccgaat actacaatat tgagcttgcg ttcgcggcag agggcgaaag cggtggcatc
     1201 catcactttg aggtttttca acaaggcttc gtcaaaagta atggtttcgt agcgcgtggc
     1261 ggatgagtct tttttggggt ctgcggtgta cacgccgtca acgttggtgg ctttgagcat
     1321 cacgtcgcag ttcatttccg caccgcgcaa tgcggcggca gtgtcggtcg tgaagaacgg
     1381 gttaccggta ccggcggcaa aaatcacgac tttgccttct tccaaatatt ggatggcttt
     1441 aggacgggcg taagtttcag cgatttgctg catagacagt gcggattgta cgcgcgcttt
     1501 gatgcctaaa gtttcaaatg cgtctttgag tgccaacgcg ttcatcacgg tcgccatcat
     1561 gcccatgtag tcggcggtgg cgcgatccat gctgcctgct tgggcggata cgccccggaa
     1621 aatattgccg ccgccgacaa caataccgac ttgcacgccc attttaacga cttcggcaat
     1681 ttcgccgaca gtttgaacga tggtatcgtg attgatgccg aacggatcgg aacccatcag
     1741 ggattcgccg gagagtttca gtaatacgcg tttgtatttg atttgctgtg tcatgggata
     1801 ccttgctttc ttgaatgtcg tcggtcggag tttgggccgt ctgaatttca aacggtcgga
     1861 atattaatga tagggtgtgt cggtttatta ttgttttgtt ttcagacggc ctttatattc
     1921 ggtcgtctta aaataggtac cgtaaacggt tttctcaaaa aaaagcaccc tgattcgttt
     1981 ggaatccagg tgctttcttt ttcataagtg ccttacactt tggcggctgc ggctacttcg
     2041 gctgcgtagt cgacaacggc tttttcgatg ccatcgccta ctttgtagcg tacgaagctg
     2101 accacttcag tgccgttttc tttggcgaat tgggcaacag tttgatcagg gttcatcacg
     2161 aatgcttggc cgttcagagt gatttcagcc aagaatttgc ggatacggcc ttcaaccatt
     2221 ttagcggcga tgtcggcagg tttgccggaa gcgatggctt gttcggtgta gatgtggcgt
     2281 tctttttcaa cggtttcagc atctacttcg gcttcgctta cgcattgtgg tttggcggca
     2341 acaatgtgca taccgatttt gcgtgctacg tcttcagagc ctttgtactc aaccaatacg
     2401 ccttcggtcg ccaatgcgcc gtggatgtag gcaaccagtt ggttggcagt gtcgatcact
     2461 tggaagcgac ggacagacat gttctcgccc aatttggcga tgatggcttt gcgttctgct
     2521 tcaaccagtt cgctcagttc ttcaacagaa gccggttttt tctcggcagc agttttcgca
     2581 acgaagttgg caaattctac gaagcccgcg tctttagcaa cgaagtcggt ttcgcagttt
     2641 acttcaacca atgcgccgac attgccgttg attgcataag ccaatacgcc ttcggcagcg
     2701 gtacggccgg ccagtttacc ggctttcgca ccggatttga tacgcaggat ttcttcggct
     2761 ttgtcgaagt tgccttcggc ttcaaccaag gcttttttgc attccatcat gcccaggccg
     2821 gtagcggcgc gcagatcggc aaccattttt gcagtaattt ctgccatttt gaatctccta
     2881 gatttttggg aaatacggaa aggattttcc gcattcggga atcgtgtgcc gcgaacggac
     2941 gttcagacgg catatttgag aaaaggggca taacgcccct cttcggtttg ccagattact
     3001 cggcagcggc ttcttgggca gcggctacgg tttcttgcag cgcttggttt ttgccttcca
     3061 aaactgcgtc agcgatgccg cggcagtaca ggcggatggc tttggcggag tcgtcgttgc
     3121 cggggatgac gtatttcacg ccgtcagggc tgttgttggt atcgactacg gcgataacgg
     3181 ggatgcccag tttttcagcc tcgaccagag tacctttttg gtagccggta tcgataacga
     3241 aaatcgcgtc gggcaggcct ttcatgtttt tgataccgcc caaagaacgt tccagttttt
     3301 caacatcgcg ttgcatttcc agaatttctt ttttgctgaa accgctttcg gcagcatttt
     3361 ccaaggctgc ggttttttct tccaggcgtt tgatggattg cttaacggtt ttgtagttgg
     3421 tcagcatacc gcccaaccag cggtaatcaa cgaaaggcat accggcgcgg gtcgcttctt
     3481 cgcggatgat gtcgcgggct tggcgtttgg tacctacgaa caatactgta cctttgttgg
     3541 caaccaaacg acgtatggct tcttgcgcgt cttggaacat cggcagggtt ttttccaggt
     3601 tgacgatatg gattttgttg cgcgcaccga aaatgtattg tgccattttc gggttccaga
     3661 aacgggtttg gtggccgaag tggacaccgg cttcaatcat ctgacgcata gtaatttgag
     3721 acattttgat ttccttgaaa gggttaaggg cacacattca atcgcataga acttgatagg
     3781 cgacgcctat tgtcaagcac ccttcggcga aagtgggcat aagttttaaa aaataaaaga
     3841 gtgtttccga aatggaaaac tgacggatta tagcggataa gaggccgtct gaaaagggat
     3901 tcagggtttt gtgccgctgt ctttttgccg ttgtgcacgc tgctgttcga attctgcctg
     3961 ttcctgttgc ttcatcaagc ggttgcggcg gcggacggtt acgacgaaga ccgtgaacac
     4021 ggtgggcagc accgcccaaa aaaccaaata aatcaaggcg cgcgcaatac tcggctgcgc
     4081 ggcggaatac ataacggcaa caaaaagata gccgatggcg acgatgtgcc acattgtgtg
     4141 cgtcctgttt gaatgttaac aaaatcgtta taatcgcaac attctaccgc aatcctgaaa
     4201 ggccgtctga aatgaggaat gaggaaaaac gcgccctgcg ccgcgaattg cgcgggcggc
     4261 gttcgcaaat ggggcgggac gtgcgggcgg cggcaacggt aaaaattaac cgcctgctca
     4321 aacgttatat caagcacggt cggaaaatcg gcgtgtattg gccgatgggc aaggaattgc
     4381 gtttggacgg ctttgtccgc gcggcgcaaa aacgcggcgc aaaactttat ctgccttata
     4441 tcgaaccgcg ttcgcggcgg atgtggttta cgccgtatcc tgaaagcgga atggaacggg
     4501 agcgcatacg gggcagggcg aggttgaacg tgccgcagtt tgcagggcgc aaaatccgcg
     4561 tgcacggttt gtcggtattg ctcgttccgc ttgtcggcat agaccgcgaa ggctaccgtt
     4621 tggggcaggc aggcggctat tacgatgcga cgcttgcagc gatgaaatac cgtttgcagg
     4681 caaaaaccgt gggcgtgggc tttgcctgcc agttggtgga cagactgtcg gtcgaggcgc
     4741 acgacctgcc gctggacggt tttgtgtcgg aggcggggat attgtgtttt tagccgttca
     4801 gacggcattt tgaacggaaa tgccgtctga aggtggaata ttgggagaaa aggatgtcgg
     4861 aaaagataat actgccggtc ttgtcgttgg gtggcgtacg gctcgaaccg ttggatgtgc
     4921 atcatgaaac gggtttgcgc gaggcggttt gcgatgggga agtttggaag ctgggagtaa
     4981 cgtccgcgcc ccatccggat agggtggcag actatatcgg gacagcattg gcaacgcgtt
     5041 tggcgtttgc ggttgtcgat gaagaggcgg gcagggtggt cgggacaacg gcgtattatc
     5101 attttgaacc gcagattccg cgtttggata ttggattcac atggtatgcg gcatcggcac
     5161 ggcggacacg gataaacacc tgttgcaaaa tcatgctgtt ggattacgca tttgatgttt
     5221 tggcttgccg ttgcgtggga tggcgcacgg atattctgaa ccttgcctcg caacgtgcca
     5281 tcgaacggct gggtgcggaa aaagacggcg tgctgcgtat gcatatgctc cgtaaagacg
     5341 gcagtgtgcg cgatacggtc gtgtacagta tgctgaggga agattggtgc aaaaacaggg
     5401 aaatcctgac cggcaggttg gcagggtatg gcgtgcaggt gtgaggcagt attttca
//
LOCUS       DAWITQ010000137         5415 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.137, whole genome shotgun sequence.
ACCESSION   DAWITQ010000137 DAWITQ010000000
VERSION     DAWITQ010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5415)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5415)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5415
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.137"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..341)
                     /locus_tag="WIX18_001740"
     CDS             complement(<1..341)
                     /locus_tag="WIX18_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HEZ5238813.1"
                     /translation="MLCPEKMSGMAGRHPYGVRSGLRRNGLKLWDIHFRMTRFIVARC
                     GLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASLQELEALPGIGPAKAKAIAE
                     YRAQNGAFKSV"
     gene            complement(377..490)
                     /gene="rrf"
                     /locus_tag="WIX18_001741"
     rRNA            complement(377..490)
                     /gene="rrf"
                     /locus_tag="WIX18_001741"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(587..3478)
                     /locus_tag="WIX18_001742"
     rRNA            complement(587..3478)
                     /locus_tag="WIX18_001742"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            complement(3887..3962)
                     /locus_tag="WIX18_001743"
     tRNA            complement(3887..3962)
                     /locus_tag="WIX18_001743"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3927..3929),aa:Ala,seq:tgc)
     gene            complement(3968..4044)
                     /locus_tag="WIX18_001744"
     tRNA            complement(3968..4044)
                     /locus_tag="WIX18_001744"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4008..4010),aa:Ile,seq:gat)
     gene            complement(4146..>5415)
                     /locus_tag="WIX18_001745"
     rRNA            complement(4146..>5415)
                     /locus_tag="WIX18_001745"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT         1169 a         1582 c         1175 g         1489 t
ORIGIN      
        1 tctacagact tgaacgcacc gttttgcgca cggtattccg caatggcctt cgccttcgcc
       61 gggcctatgc ctggcagcgc ctccaactcc tgcagcgaag ccgcattgat gtttaccgcc
      121 gcaagggaga aggcgcagga gaacagcata cagaacagca cgaacatttt cttcatggtt
      181 tttcctttaa gggttgcaaa caataaaccg catcttgcga cgataaaacg agtcattcta
      241 aaatgaatat cccaaagttt caagccgttc ctccgcaaac ccgaccggac gccgtacgga
      301 tgccgtcccg ccatccccga cattttttcc gggcaaagca aaaacccccg aataatcggg
      361 ggttttctga atgggtgttt ggcagtgacc tactttcgca tggaagaacc acactatcat
      421 cggcgctgag tcgtttcacg gtcctgttcg ggatgggaag gcgtgggacc aactcgctat
      481 ggccgccaaa cttaaactgt tacaaatcgg taaagcctta atcaatatat tcggtaatga
      541 ctgaatcagt cagtaagctt ttatctcttg aagttcttca aatgatagag tcaagcctca
      601 cgagcaatta gtatgggtta gcttcacgcg ttaccgcgct tccacacccc acctatcaac
      661 gtcctggtct cgaacgactc tttagtgcgg ttaaaccgca agggaagtct catcttcagg
      721 cgagtttcgc gcttagatgc tttcagcgct tatctcttcc gaacttagct acccggctat
      781 gcaactggcg ttacaaccgg tacaccagag gttcgtccac tccggtcctc tcgtactagg
      841 agcagccccc gtcaaacttc caacgcccac tgcagatagg gaccaaactg tctcacgacg
      901 ttttaaaccc agctcacgta ccactttaaa tggcgaacag ccataccctt gggaccgact
      961 acagccccag gatgtgatga gccgacatcg aggtgccaaa ctccgccgtc gatatgaact
     1021 cttgggcgga atcagcctgt tatccccgga gtacctttta tccgttgagc gatggccctt
     1081 ccatacagaa ccaccggatc actatgtcct gctttcgcac ctgctcgact tgtcggtctc
     1141 gcagttaagc taccttttgc cattgcacta tcagtccgat ttccgaccgg acctaggtaa
     1201 ccttcgaact cctccgttac gctttgggag gagaccgccc cagtcaaact gcctaccatg
     1261 cacggtcccc gacccggatg acgggtctag gttagaacct caaagacacc agggtggtat
     1321 ttcaaggacg gctccacaga gactggcgtc tctgcttcaa agcctcccac ctatcctaca
     1381 caagtgactt caaagtccaa tgcaaagcta cagtaaaggt tcacggggtc tttccgtcta
     1441 gcagcgggta gattgcatct tcacaaccac ttcaacttcg ctgagtctca ggaggagaca
     1501 gtgtggccat cgttacgcca ttcgtgcggg tcggaactta cccgacaagg aatttcgcta
     1561 ccttaggacc gttatagtta cggccgccgt ttactggggc ttcgatccga tgctctcaca
     1621 tcttcaatta accttccagc accgggcagg cgtcacaccc tatacgtcca ctttcgtgtt
     1681 agcagagtgc tgtgttttta ataaacagtc gcagccacct attctctgcg accctccggg
     1741 gcttacggag caagtcctta accttagagg gcataccttc tcccgaagtt acggtatcaa
     1801 tttgccgagt tccttctcct gagttctctc aagcgcctta gaattctcat cctgcccacc
     1861 tgtgtcggtt tgcggtacgg ttcgattcaa actgaagctt agtggctttt cctggaagcg
     1921 tggtatcggt tacttcgtgt ccgtagacac tcgtcgtcac ttctcggtgt taagaagacc
     1981 cggatttgcc taagtcttcc acctaccggc ttaaacaagc tattccaaca gcttgccaac
     2041 ctaaccttct ccgtccccac atcgcatttg aatcaagtac aggaatatta acctgtttcc
     2101 catcgactac gcatttctgc ctcgccttag gggccgactc accctacgcc gatgaacgtt
     2161 gcgcaggaaa ccttgggctt tcggcgagcg ggcttttcac ccgctttatc gctactcatg
     2221 tcaacattcg cacttctgat acctccagca cactttacaa tgcaccttca tcggcctaca
     2281 gaacgctccc ctaccatgcc ggtaaaccgg catccgcagc ttcggttata gatttgagcc
     2341 ccgttacatc ttccgcgcag gacgactcga ccagtgagct attacgcttt ctttaaatga
     2401 tggctgcttc taagccaaca tcctggctgt ctgggccttc ccacttcgtt taccacttaa
     2461 tctatcattg gggaccttag ctggcggtct gggttgtttc cctcttgaca acggacgtta
     2521 gcacccgctg tctgtctccc gaggaaccac ttgatggtat tctgagtttg ccatgggttg
     2581 gtaagttgca ataaccccct agccataaca gtgctttacc cccatcagtg tcttgctcga
     2641 ggcactacct aaatagtttt cggggagaac cagctatctc cgagtttgtt tagcctttca
     2701 cccctatcca cagctcatcc ccgcattttg caacatgcgt gggttcggtc ctccagtacc
     2761 tgttacggca ccttcaacct ggccatggat agatcactcg gtttcgggtc tacacccagc
     2821 aactcatcgc cctattaaga ctcggtttcc ctacgcctcc cctattcggt taagctcgct
     2881 actgaatgta agtcgttgac ccattataca aaaggtacgc agtcacacct ctagggtgct
     2941 cccactgttt gtatgcatca ggtttcaggt tctgtttcac tcccctcccg gggttctttt
     3001 cgcctttccc tcacggtact ggttcactat cggtcgatga tgagtattta gccttggagg
     3061 atggtccccc catattcaga caggatttca cgtgtcccgc cctacttttc gtacgcttag
     3121 taccgctgtt gagatttcga atacgggact gtcacccact atggtcaagc ttcccagctt
     3181 gttcttctat ctcgacagtt attgcgtaca ggctcctccg cgttcgctcg ccactacttg
     3241 cggaatctcg gttgatttct tttcctccgg gtacttagat ggttcagttc tccgggttcg
     3301 cttctctaag tctatgtatt caacttagga tactgcacag aatgcagtgg gtttccccat
     3361 tcggacatcg cgggatcatt gctttattgc cagctccccc gcgcttttcg caggcttaca
     3421 cgtccttcgt cgcctatcat cgccaaggca tccacctgat gcacttattc acttgactct
     3481 atcatttcaa gaacttcttt gacttcgttt gcctacctgt tgactaagta aaagcaaact
     3541 tgaaattcct actttgataa agcttactgc tttgttgtgt cttaatcctg ccttttgtgt
     3601 ttcaggatta agtcgataca atcatcaccc aaatactgtg tttgttttct tttctcttgt
     3661 gagcgatttt ttatcctttg caaagaataa aaaatcaaaa caaacgcttt gtctttgttt
     3721 gttgatttcg gctttccaat ttgttaaaga tcgatgcgtt cgatattgct atctactgtg
     3781 caaatcaaaa cgagctgatt attatatcag cattttgttc ttggtcaagt gtgatgtcgc
     3841 cctgaatgga ttctgttcca ttcttccgtt ttgatttgta cagtattggt ggaggcaaac
     3901 gggatcgaac cgatgacccc ctgcttgcaa agcaggtgct ctaccaactg agctatgccc
     3961 ccgttattgg tgggtctggg aggacttgaa cctccgaccc cacgcttatc aagcgtgtgc
     4021 tctaaccagc tgagctacaa acccggattc tcttcttaag cgaatcttgc cttcactcaa
     4081 gcttcttccg catctttttc agtttaccga taagtgtgaa tgcctaaagc ctcttctttc
     4141 tctagaaagg aggtgatcca gccgcaggtt cccctacggc taccttgtta cgacttcacc
     4201 ccagtcatga agcataccgt ggtaagcgga ctccttgcgg ttatcctacc tacttctggt
     4261 atcccccact cccatggtgt gacgggcggt gtgtacaaga cccgggaacg tattcaccgc
     4321 agtatgctga cctgcgatta ctagcgattc cgacttcatg cactcgagtt gcagagtgca
     4381 atccggacta cgatcggttt tgtgagattg actccacctc gcggcttggc taccctctgt
     4441 accgaccatt gtatgacgtg tgaagccctg gtcataaggg ccatgaggac ttgacgtcat
     4501 ccccaccttc ctccggcttg tcaccggcag tctcattaga gtgcccaact gaatgatggc
     4561 aactaatgac aagggttgcg ctcgttgcgg gacttaaccc aacatctcac gacacgagct
     4621 gacgacagcc atgcagcacc tgtgttacgg ctcccgaagg cactcctccg tctctggagg
     4681 attccgtaca tgtcaagacc aggtaaggtt cttcgcgttg catcgaatta atccacatca
     4741 tccaccgctt gtgcgggtcc ccgtcaattc ctttgagttt taatcttgcg accgtactcc
     4801 ccaggcggtc aatttcacgc gttagctacg ctaccaagca atcaagttgc ccaacagcta
     4861 attgacatcg tttagggcgt ggactaccag ggtatctaat cctgtttgct acccacgctt
     4921 tcgggcatga acgtcagtgt tatcccagga ggctgccttc gccatcggta ttcctccaca
     4981 tctctacgca tttcactgct acacgtggaa ttctacctcc ctctgacaca ctcgagtcac
     5041 ccagttcaga acgcagttcc cgggttgagc ccggggattt cacatcctgc ttaagtaacc
     5101 gtctgcgccc gctttacgcc cagtaattcc gattaacgct cgcaccctac gtattaccgc
     5161 ggctgctggc acgtagttag ccggtgctta ttcttcaggt accgtcatca gccgctgata
     5221 ttagcaacag ccttttcttc cctgacaaaa gtcctttaca acccgaaggc cttcttcaga
     5281 cacgcggcat ggctggatca ggcttgcgcc cattgtccaa aattccccac tgctgcctcc
     5341 cgtaggagtc tgggccgtgt ctcagtccca gtgtggcgga tcatcctctc agacccgcta
     5401 ctgatcgtcg ccttg
//
LOCUS       DAWITQ010000138         5311 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.138, whole genome shotgun sequence.
ACCESSION   DAWITQ010000138 DAWITQ010000000
VERSION     DAWITQ010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5311)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5311)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5311
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.138"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..>5311
                     /locus_tag="WIX18_001746"
     CDS             <1..>5311
                     /locus_tag="WIX18_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HEZ5238814.1"
                     /translation="VNAEGKLVNTGMIAATGENHAVSLHARNVHNSGTVASQDDANIH
                     SQTLDNSGTVLSSGQLTVRNLGRLKNHNNGTIQAARLDMSTGGLDNTGNITQTGSQAL
                     DLVSAGKFDNSGKIGVSDVPQTGLNPNPSVIPQIPSTATGSGSSTVLASKPGSNNPVS
                     PTAPAKNYAGGRIQTTGAFDNAGSINAGGQIDIAAQNGLENSGSLNAAKLRVSGDSFN
                     NTVKGKLQAHDLAVNTQTAKNSGHLLTLTGKIDNRELHNAGEIAANNLTLIHSGRLSN
                     DKKGNIRAAHLQLDTAGLHNAGNILADSGTVTTKNNLRNTGKVSVARLNTEGQTLDNT
                     HGHIEAETVNIQSQQLTNQSGHITATEQLTINSRNVDNQNGKLLSANQAQLAVSDGLY
                     NQHGEIATNRQLSIHDKNQNTLALNNADGTIQSAGNVSLQAKSLANNGTLTAGNKLDI
                     ALTDDFVVERDLTAGKQLNLSIKGRLKNTHTLQASHTLKLNAGNIDNQVTGKIIGGEQ
                     TDITSEQHVDNRGLINSDGLTHIGAGQTLTNTGTGKIYGNHIALDAQILLNREETTEG
                     STKAGTIAARKRLDIGAKEIHNQEGALLSSEGIFAVGNRLDEQHHAAGMADTFVNGSA
                     GLEVQGDALMSVRNMQNINNHFKTETYLAKAEKQVRDYTVLGQNTYYQAGKDGLFDNS
                     QGQKDQTTATFHLKNGSRIEANQWHVRDYHIETYKERIIENRPAHITVGGNLTASGQN
                     WLNKDSRIVVGGRIITDDLNQKEITNQSTTGKGRTDAVGTQWDSVTKKGWYSGRKRQR
                     RTERNHTPYHDTQLFTHDFDTPVSVIQQNAASPSFQPAASAIKLIDGVSTAAVNGQRI
                     HTGNVVSLNNATVTLPNSSLYTTHPDNKGWLVETDPQFADYRRWLGSDYMLQQLKLDT
                     NHLHKRLGDGYYEQKLVNEQIHQLTGYRRLDGYRSDEEQFKALMDNGLTAAKTFALTP
                     GIALSAEQVARLTSDIVWMENQTVTLSDGSTQTVLVPKVYALARKGDLNTSGGLISAE
                     QVLLKLQNGNLTNSGTIAGRQAVLIQARNINSNGNIQADQIGLKAEKSINIDGGQVQA
                     GRLLTAQAQNINLNGTTQTSGNERNGNTAIDRMAGINVVGSHTEQVDNRTSDGILSLH
                     AGNDINLNAATVSNQVKDGTTQITAGNNLNLGTIRTEHREAYGTLDDENHRHVRQSTE
                     VGSSIRTQNGALLRAGNDLKIRQGELEAEEGKTVLAAGRDVTISEGRQITELDTSVSG
                     KSKGILSSTKTQDRYRFSHDEAVGSNIGGGKMIVAAGQDINVRGSNLISDKGIVLKAG
                     HDIDISTAHNRYTGNEYHESKKSGVMGTGGLGFTIGNRKTTDDTDRTNIVHTGSIIGS
                     LNGDTVTVAGNRYRQTGSTVSSPEGRNTVTAKSIDVEFANNRYATDYAHTQEQKGLTV
                     ALNVPVVQAAQNFIQAAQNVGKSKNKRVNAMAAANAAWQSYQAAQQMQQFAPSSSAGQ
                     GQNNNQSPSISVSITYGEQKSRNEQKRHYTEAAASQIIGKGQTTLAATGSGEQSNINI
                     TGSDVIGHAGTALIADNHIRLQSAKQDGSEQSKNKSSGWNAGVAVKIGNGIRFGITAG
                     GNIGKGKEQGGNTTHRHTHVGSTTGKTTIRSGGDTTLKGAQLIGKGIQADTRNLHIES
                     VQDTETYQSKQQNGNVQVTVGYGFSASGSYRQSKVKADHASVTEQSGIYAGEDGYQIK
                     VRDNTDLKGGIITSTRSAESKGKNRFQTATLTHRDIQNHSRYEG"
BASE COUNT         1721 a         1365 c         1184 g         1041 t
ORIGIN      
        1 gtgaatgctg agggtaaact ggtcaacaca ggcatgattg cagcgacggg agaaaatcat
       61 gcggtttcac ttcatgcccg caatgttcat aatagcggta cggttgcctc acaggatgat
      121 gccaatattc acagccagac gctggacaat tcaggtacgg tcttatcctc aggtcaattg
      181 actgtccgta atttaggccg tctgaaaaac cataacaacg gtacgatcca ggctgcacgc
      241 ttagatatgt caacaggtgg tttggataac acaggtaata ttactcaaac aggttcacaa
      301 gcattggatt tggtatctgc aggcaaattc gataacagtg gcaagattgg tgtaagtgac
      361 gttccacaga ccggtttgaa tcccaatcca tcagtcatac cacagattcc gagtactgca
      421 acaggttcag gcagcagcac tgtcttggca tctaagcctg gttcaaacaa tcccgtttca
      481 cctacagcac ctgcaaaaaa ctacgccgga ggacgcattc aaacaacagg agcatttgac
      541 aatgcaggat caatcaatgc aggtgggcaa attgacattg ccgcccaaaa cggtttggaa
      601 aattcgggta gtctgaatgc ggctaaacta cgagtatcag gcgattcatt taacaatacg
      661 gtaaaaggca aactccaggc acacgatctg gctgttaaca ctcaaactgc taaaaacagc
      721 ggtcacttat taactctaac cggcaagatt gacaaccgtg aactgcataa tgccggagaa
      781 attgccgcca acaatctgac actcattcat tcgggccgct tgagcaatga taaaaaaggc
      841 aatattcgag ctgcacattt acagcttgat accgccggtt tacataatgc aggtaacatt
      901 cttgccgata gtggaaccgt taccaccaag aataatcttc gcaatacagg aaaagtttct
      961 gttgcacgac taaataccga aggtcagact ctagataata cgcacggaca tatagaggct
     1021 gaaacggtta acatccaaag tcagcaactg actaaccaaa gtggccatat tactgctacc
     1081 gaacaactga ctatcaatag tcgaaatgta gacaaccaaa acggcaaact cctatctgca
     1141 aaccaagcac aattagctgt ttcagacggc ctatacaacc aacatggtga aattgccacc
     1201 aaccggcagt tgtctattca cgataaaaat caaaacactt tggcgttaaa caatgcggat
     1261 ggcacgattc aatctgccgg taatgtatcg ctacaagcca aatcactcgc caacaatggc
     1321 acattaacag ccggtaacaa actggatatt gctttgacgg acgatttcgt cgtagagcgc
     1381 gacctcactg caggcaaaca attaaatcta agcataaaag gccgtctgaa aaatacccat
     1441 accctacaag caagccatac gctcaaactc aatgccggca atatagataa ccaagttaca
     1501 ggcaaaatta ttggtggaga acaaacggac atcacatccg aacagcatgt tgacaacagg
     1561 ggcttgatca acagcgacgg tttgacccac atcggtgcag gtcaaaccct gaccaacacc
     1621 gggacaggca aaatctatgg caaccatatt gccctggacg cgcaaatact gcttaaccgg
     1681 gaagaaacga cggaaggcag taccaaagcg gggacaatag ctgcaaggaa acgtttggat
     1741 attggagcga aagagattca taaccaagaa ggtgccctac tatccagcga aggtattttt
     1801 gccgtaggta atcgactgga tgaacaacat catgcggcag gcatggccga tacctttgtt
     1861 aatggcagtg ccggtttgga agtacaaggt gatgcattga tgtccgttcg gaatatgcag
     1921 aatatcaata atcactttaa aacagagaca tacttagcca aagcagaaaa gcaagttcgt
     1981 gactacaccg tactggggca aaatacctac tatcaggcag gaaaagacgg tttattcgac
     2041 aactcgcaag gacaaaaaga ccaaactact gctacgttcc atttaaaaaa tggttctcgt
     2101 attgaggcca accaatggca tgtccgagac taccacatcg agacttataa agaacgcatc
     2161 atcgaaaacc ggccggcaca cattactgtg ggcggtaatt tgactgcctc aggtcaaaat
     2221 tggctgaaca aagacagccg gattgtagta ggcgggcgta ttatcactga tgatttaaac
     2281 cagaaagaaa ttaccaatca aagtacaaca ggcaaaggtc gcacagatgc tgtcggcaca
     2341 cagtgggatt cagttacaaa aaaaggatgg tacagcggta gaaaaagaca acgccgtact
     2401 gaaagaaacc atactcctta ccatgatacc caactattta cccacgactt cgacacgcct
     2461 gtatccgtca tccaacagaa tgccgcctcc ccttcctttc aacccgctgc atctgcaatc
     2521 aaactgattg acggagtatc cacagccgcc gtcaatggtc agcgcatcca taccggtaat
     2581 gtggtctcgt taaataacgc tactgttact ctgcctaaca gcagcctcta taccacccat
     2641 cctgacaata aaggctggtt ggttgaaacc gatcctcaat ttgcagacta ccgccgctgg
     2701 ttgggcagcg actacatgtt gcaacaactg aaattggaca ccaatcatct acacaaacgg
     2761 cttggcgacg gctactacga acaaaaactt gttaatgaac aaatccatca gttaacaggc
     2821 taccgccgac tcgacggcta caggagtgat gaagaacaat tcaaagctct gatggacaac
     2881 ggccttactg ctgccaaaac attcgctctc accccaggta tcgccttgag tgcagagcaa
     2941 gttgcccgct taacttcaga tatcgtttgg atggaaaatc aaaccgtcac cctgtctgac
     3001 ggttcgactc aaaccgtact ggttcctaaa gtctatgccc tggcgcgcaa aggtgatctc
     3061 aatacctccg gtggcctgat tagtgccgaa caagtcttac ttaaactgca aaacggcaac
     3121 ctgactaaca gcggtaccat tgcggggcga caggccgtac tcatccaggc acggaatatt
     3181 aacagcaacg gcaacattca agccgaccaa atcggcttaa aagctgaaaa aagtatcaat
     3241 atcgacggcg ggcaggtaca agcaggcaga ctgctgactg cccaagcgca aaatatcaac
     3301 cttaacggta caacccaaac ttccggtaat gaacgtaacg gcaataccgc catcgatcgt
     3361 atggccggca ttaacgtggt cggaagccat actgagcaag tagataacag aacttcagac
     3421 ggcatcctat ccctgcatgc cggcaacgat atcaacctca atgcggccac cgtctctaac
     3481 caagttaaag acggcactac ccaaattacc gccggcaata atctcaacct cggcaccatc
     3541 cgtaccgaac atcgcgaagc ctatggtaca ttagatgacg agaaccatcg ccatgtccgc
     3601 caaagtaccg aagtcggcag cagtatccgc acgcaaaacg gcgcactgct tagagccggt
     3661 aacgacttaa aaatccgcca aggcgaacta gaggccgaag aaggcaaaac cgtccttgcc
     3721 gcgggacgtg atgtcactat cagcgaagga cgccaaataa ccgaactgga tacctcggta
     3781 agcggaaaaa gcaaaggcat cctttccagt accaaaacac aggatcgcta ccgcttcagt
     3841 catgatgaag cagtcggcag caacatcggc ggcggcaaaa tgattgttgc agccgggcag
     3901 gatatcaatg tacgcggcag caaccttatt tctgataagg gcattgtttt aaaagcagga
     3961 cacgacatcg atatttctac tgcccataat cgctataccg gcaatgaata ccacgagagc
     4021 aaaaaatcag gcgtcatggg tactggcgga ttgggcttta ctatcggtaa ccggaaaact
     4081 accgatgaca ctgatcgtac caatattgtc catacaggca gcattatagg cagcctgaat
     4141 ggagacaccg ttacagttgc aggaaaccgc taccgacaaa ccggcagtac cgtctccagc
     4201 cccgaggggc gcaataccgt cacagccaaa agcatagatg tagagttcgc aaacaaccgg
     4261 tatgccactg actacgccca tacccaggaa caaaaaggcc ttaccgtcgc cctcaatgtc
     4321 ccggttgtcc aagctgcaca aaacttcata caagcagccc aaaatgtggg caaaagtaaa
     4381 aataaacgcg ttaatgccat ggctgcagcc aatgctgcat ggcagagtta tcaagcagcc
     4441 caacaaatgc aacaatttgc tccaagcagc agtgcgggac aaggtcaaaa caacaatcaa
     4501 agccccagta tcagtgtgtc cattacctac ggcgaacaga aaagtcgtaa cgagcaaaaa
     4561 agacattaca ccgaagcggc agcaagtcaa attatcggca aagggcaaac cacacttgcg
     4621 gcaacaggaa gtggggagca gtccaatatc aatattacag gttccgatgt catcggccat
     4681 gcaggtactg ccctcattgc cgacaaccat atcagactcc aatctgccaa acaggacggc
     4741 agcgagcaaa gcaaaaacaa aagcagtggt tggaatgcag gcgtagccgt caaaataggc
     4801 aacggcatca ggtttggaat taccgccgga ggaaatatcg gtaaaggtaa agagcaaggg
     4861 ggaaatacta cccaccgcca cacccatgtc ggcagcacaa ccggtaaaac taccattcga
     4921 agcggcgggg ataccaccct caaaggtgcg cagctcatcg gcaaaggcat acaggcagat
     4981 acgcgcaacc tgcatataga aagtgttcaa gatactgaaa cctatcaaag caaacaacaa
     5041 aacggcaatg tccaagttac tgtcggttac ggattcagtg caagcggcag ttaccgccaa
     5101 agcaaagtca aagcagacca tgcttcggta accgagcaaa gcggtattta tgccggagaa
     5161 gacggctatc aaatcaaagt cagagacaac acagacctca agggcggtat catcacctcc
     5221 acccgaagtg ccgaaagcaa agggaaaaac cgctttcaga cggccaccct cacccatcgc
     5281 gacattcaaa accacagccg ctacgaaggc a
//
LOCUS       DAWITQ010000139         5294 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.139, whole genome shotgun sequence.
ACCESSION   DAWITQ010000139 DAWITQ010000000
VERSION     DAWITQ010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5294)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5294)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5294
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.139"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            58..340
                     /locus_tag="WIX18_001747"
                     /pseudo
     CDS             58..340
                     /locus_tag="WIX18_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214428.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            complement(361..1587)
                     /locus_tag="WIX18_001748"
     CDS             complement(361..1587)
                     /locus_tag="WIX18_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY family inner membrane protein"
                     /protein_id="HEZ5238815.1"
                     /translation="MTFLQRLQGLADNKICAFAWFVVRRFDEERVPQAAASMTFTTLL
                     ALVPVLTVMVAVASIFPVFDRWSDSFVSFVNQTIVPQGADMVFDYINAFREQANRLTA
                     IGSVMLVVTSLMLIRTIDNTFNRIWRVNSQRPWMMQFLVYWALLTFGPLSLGVGISFM
                     VGSVQDAALASGAPQWSGALRTAATLTFMTLLLWGLYRFVPNRFVPARQAFVGALATA
                     FCLETARSLFTWYMGNFDGYRSIYGAFAAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQ
                     GEAFRRGFDSRGRFDDVLKILLLLDAAQKEGKALPVQEFRRHINMGYDELGELLEKLA
                     RYGYIYSGRQGWVLKTGADSIELNELFKLFVYRPLPVERDHVNQAVDAVMMPCLQTLN
                     MTLAEFDAQAKKQQQS"
     gene            complement(1602..2027)
                     /locus_tag="WIX18_001749"
     CDS             complement(1602..2027)
                     /locus_tag="WIX18_001749"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238816.1"
                     /translation="MPSEHAAYADLTASSAKRLLCAKAILFSSAVRTGAAVGNIFFDG
                     FADGGDFGDGAQYGFATFNAVDAASDSAGGIAGAAVLGIVEDEDFEGDLGSWADSVKM
                     VRSSNGITVVPMPSETAAVQAFVPDGKLGYNIGHQCPTY"
     gene            2132..2791
                     /gene="queC"
                     /locus_tag="WIX18_001750"
     CDS             2132..2791
                     /gene="queC"
                     /locus_tag="WIX18_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HEZ5238817.1"
                     /translation="MSNQQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHA
                     VELERARWIAQDLGIKQTVLDLSLMRQITHNALMDDTAAIETAGNGVPNTFVDGRNAL
                     FLLYAAIYAKGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPL
                     MYLTKAQTWALADEMGALDYIREQTHTCYNGIVGGCRECPSCILRERGLAEYLESKKA
                     V"
     gene            2819..3334
                     /locus_tag="WIX18_001751"
     CDS             2819..3334
                     /locus_tag="WIX18_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1543 domain-containing protein"
                     /protein_id="HEZ5238818.1"
                     /translation="MPKLHMFYLGGNAGRSNIEVHDIQFAVCDDYREAIPALKAAWFG
                     DADKIHIDGWQVVEWADGYDIAVSEMPKTEMPSEHAPRLYFANVGGYRAGQLAEAHAF
                     GLFTAATPAEAKQKALQTLLTDHVQQHKDNLKDVDNLLALDRIGNFHIRLTPNPHGKP
                     AEIGFQGYLPI"
     gene            3341..3763
                     /gene="queD"
                     /locus_tag="WIX18_001752"
     CDS             3341..3763
                     /gene="queD"
                     /locus_tag="WIX18_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HEZ5238819.1"
                     /translation="MKITKIFTFDSSHMLDGHDGKCQNLHGHTYKLEITVSDDLVRGG
                     PKDGMVMDFTDLKAIVKQHITDPFDHAFIYHGGNGRESQIAALLEGWNMKTLRLPCRT
                     TAENMAVEMYDRLKNAGLNVCRVKLWETPTSCAEYEGE"
     gene            4032..4403
                     /locus_tag="WIX18_001753"
     CDS             4032..4403
                     /locus_tag="WIX18_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HEZ5238820.1"
                     /translation="MKLLSTLLVLLVTAEHFYIAWLEMTQIPSEKAAEIFKLPYEFME
                     QKRVQTLFGNQGLYNGFLGIGLVWSRFAAPDNAVYGATVLFLGFVLIAAAWGAFSSGN
                     KGILVKQGLPAFLAAAAVLAV"
     gene            4400..5038
                     /locus_tag="WIX18_001754"
     CDS             4400..5038
                     /locus_tag="WIX18_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HEZ5238821.1"
                     /translation="MKKINVAPENPQYRIVEIFESLQGEGWNTGMPAVFVRLGKCNLA
                     CGWCDTDYLTFGMMSLSDILGRLKAYAARNIIITGGEPTIQPHLDMLLDMLKAEGYFL
                     CIETNGLNPAPPQIDYVATSPKACYAAKYENSCIETADEVRIVADGDVLAFCENMERK
                     IRAHHYYLSPCEQDGAMNIYDTIRQIGILNSRPDAPVHWQLSVQTHKWAGIE"
BASE COUNT         1354 a         1535 c         1318 g         1087 t
ORIGIN      
        1 tgttttttcg atacggaacc ggatagagga aaaatcgaac attgcgcctg ccttgctatg
       61 attcacgaag aaatctccgc catgcctatg ggctatgaaa ccttgatcgg cgatatgggc
      121 agcgcactgt caggcggaca aaaacaacgc atcgtattgg cgcgggcctt aatattgcga
      181 accgaaaatc ctatttttag atgcagcgac cagccatttg gatattgcca atgaaaaagc
      241 agtcaatgca aacttgaatg gcttgtctat cataaaaatt atggcggcac acagaaagga
      301 aacggtggaa tcagcagata ggaaaatgtc tttaggataa aaatacagtt tcaaaaatac
      361 tcaagattgc tgctgttttt tcgcctgagc gtcaaactct gccagcgtca tgttcaaagt
      421 ctgcaaacac ggcatcatta ctgcatcgac agcttggttc acatgatccc tttccacagg
      481 caacggacgg taaacgaaga gcttgaagag ttcgttcaac tcaatcgaat ccgcccccgt
      541 tttcaacacc caaccctgtc tgccggaata gatatagccg taccgcgcca gcttttccaa
      601 aagctcgccc aactcgtcgt agcccatatt gatatgccgt ctgaactcct gaacaggcaa
      661 ggctttgcct tctttttgcg ccgcatccag aagcagcagg attttcaaca cgtcgtcaaa
      721 ccgtccgcgc gagtcgaagc ccctgcggaa cgcttctccc tgccagtagg agagtgaaga
      781 agtcagcacc gcgccgccca agaccagcgt ccacaacagg ttcagccaca acagaaaaaa
      841 cggcacggcg gcaaacgcgc cgtaaatcga gcggtagccg tcgaaattgc ccatatacca
      901 agtgaagagg gagcgcgcgg tttccagaca aaacgctgtt gccaaagccc cgacaaacgc
      961 ctgccgcgcg ggaacgaagc ggtttggcac gaagcggtac agcccccaca gcaaaagcgt
     1021 catgaaggtc agcgtcgccg ccgttcgcaa cgcgcccgac cactgcggcg cacctgaggc
     1081 aagcgcggca tcctgtaccg agccgaccat aaaggaaatg cccacgccca aagacagcgg
     1141 cccgaacgtc agtaaagccc aatagacgag aaactgcatc atccacggac gctgggaatt
     1201 gacccgccag atgcggttga acgtattgtc tatcgtccga atcagcatca gcgaggtaac
     1261 gaccagcatc acgctgccga ttgccgtcag ccggttcgcc tgctcgcgga acgcattgat
     1321 atagtcgaac accatgtccg cgccctgcgg cacaatggtt tggttgacga aggagacgaa
     1381 cgaatccgac cagcggtcga acacggggaa aatcgaagcg accgccacca tcacggtcag
     1441 cacggggacg agtgccagca gcgtcgtaaa cgtcatgctt gccgccgcct gcggtacgcg
     1501 ttcttcatca aagcggcgga cgacgaacca tgcaaacgca cagattttat tgtctgccaa
     1561 accttgcaaa cgttgtaaaa aggtcataat ttcttgcccg gtcagtaagt tgggcattga
     1621 tgcccgatgt tatagccaag tttgccgtca ggaacaaatg cctgaactgc ggctgtttca
     1681 gacggcatcg gaacaactgt tatgccgttt gaagaccgaa ccattttaac ggaatccgcc
     1741 catgaaccca aatccccctc aaaatcctcg tcctctacta ttcccaaaac ggcagccccc
     1801 gcaatcccgc ccgccgaatc gctcgcggca tcgacagcgt tgaaggttgc gaagccgtat
     1861 tgcgcaccgt ccccaaagtc tccgccgtct gcgaagccgt caaaaaagat attcccgaca
     1921 gcggctcccg tcctgaccgc cgaagaaaac aatatcgcct tcgcacaaag caaacgcttg
     1981 gcggaactcg ccgtcaagtc ggcataagcc gcgtgttcag acggcatggc gttcagatgc
     2041 cgtctgaacg cgtttgcctg tataatccgc atctttactg ttcaacttcg cggttcgcaa
     2101 acctcccgcg ttaccaaaac taggattcga tatgtcaaac caacaagcct tggtcatctt
     2161 ttcgggcggt caggattcga ccacctgcct gattcaggca atccaaacct acgggcgcga
     2221 aaacgtccaa gccatcactt tccaatacgg gcaacgccat gccgtcgagc tggaacgcgc
     2281 ccgctggatt gcgcaggatt tgggcatcaa acaaaccgta ctcgacttga gcctgatgcg
     2341 gcagattacg cacaatgccc tgatggacga taccgccgcc atcgaaaccg ccggcaacgg
     2401 tgttcccaat acctttgtgg acgggcgcaa cgcgcttttc ctgctttacg ccgcgattta
     2461 cgccaaaggg caggggatac ggcacatcat cgcgggcgtg tgcgaaaccg acttctccgg
     2521 ctatcccgac tgccgcgacg tgtttgtcaa atcgatgaac gttaccctta atttggcgat
     2581 ggactatgat tttcaaatcc acacgccgct gatgtatctg accaaggcgc aaacttgggc
     2641 gttggcggac gaaatgggcg cgctggacta tatccgcgag caaacccaca cctgctataa
     2701 cggcatcgtc ggcggctgcc gcgaatgccc gagctgtatc ttgcgcgaac gcgggctggc
     2761 ggaatatctg gaaagtaaaa aggccgtctg aacacgcgca aaccataagg aatacgatat
     2821 gcccaagctc catatgtttt acctcggcgg caatgccggc aggtcgaata tcgaagtgca
     2881 cgacatccaa tttgccgtgt gcgacgacta ccgcgaagcc atccccgcac tcaaagccgc
     2941 atggttcggc gatgcggaca aaatccacat cgacggttgg caggttgtcg aatgggcgga
     3001 cggttacgac atcgccgtat ccgaaatgcc caaaacggaa atgccgtctg aacacgcccc
     3061 gcgcctgtat tttgccaatg tcggcggtta tcgcgcgggg cagcttgccg aggcgcacgc
     3121 gttcgggctg ttcaccgccg ccacgcctgc cgaagccaaa caaaaagccc tgcaaaccct
     3181 gttgaccgac catgttcagc aacataaaga caacttaaaa gacgtggaca acctgcttgc
     3241 gctcgaccgc atcggcaatt tccatatccg cctgaccccg aatccgcacg gcaaacccgc
     3301 cgaaatcggc tttcaaggct atttgcccat ttgagaaccc atgaaaatca ccaaaatctt
     3361 caccttcgac tcctctcata tgctcgacgg gcatgacggc aaatgccaaa acctgcacgg
     3421 gcatacctac aaactcgaaa tcaccgtttc agacgacctc gtcagaggcg ggccgaaaga
     3481 cggtatggtg atggacttta ccgacttgaa agccattgtc aaacaacaca ttaccgaccc
     3541 cttcgaccac gccttcatct accacggcgg caacgggcgc gaatctcaaa tcgccgcact
     3601 cttggaaggc tggaacatga aaaccctgcg cctgccctgc cgcaccactg ccgaaaatat
     3661 ggcggtcgaa atgtacgacc gtctgaaaaa cgcggggctg aacgtgtgcc gcgtcaaatt
     3721 gtgggaaacg ccgacatcgt gtgcggagta tgaaggggag tagggaatat cttgaacgta
     3781 tcgatatagt aaattccaat aagacatgcc caaccgcgtc attcccgcgc aggcgggaat
     3841 ccagaccttg gtttttcagg aatatttaaa aattgcagca attccaaatc tttggattcc
     3901 cgcctgcgcg gaaaggacgg tttagagcgt ccttatttga atttaccgta aaacggtttt
     3961 ttctcctgta cggattcccc gttttttcag acgaccctcc atatcaaata cacccattaa
     4021 aaggaatacc catgaaactt ctctccaccc tcttagtcct ccttgtcacc gccgaacatt
     4081 tctacatcgc ctggcttgaa atgacgcaga ttcccagcga aaaagcggcg gaaatattca
     4141 agctgcctta tgaatttatg gaacaaaagc gcgtgcagac cctgttcggc aaccaagggc
     4201 tgtataacgg ctttctcggc atcgggctgg tgtggtcgcg gtttgccgct ccggataacg
     4261 cggtgtacgg cgcaacggta ctgtttctcg gcttcgtcct gattgccgcc gcgtggggcg
     4321 cgttctcttc cggcaacaaa ggcatactcg tcaaacaagg tttgcccgca tttttggcag
     4381 cggcggcggt gttggcggta tgaaaaaaat caatgttgcc cccgaaaatc cccaataccg
     4441 catcgtcgaa atctttgaaa gcctgcaagg cgaaggctgg aacacgggca tgcccgccgt
     4501 tttcgtccgc ttgggcaaat gcaacctcgc ctgcggctgg tgtgataccg attatttgac
     4561 attcggcatg atgagcctgt ccgacatctt aggccgtctg aaagcctatg ccgcccgcaa
     4621 catcatcatc accggcggcg aaccgaccat ccagccgcat ctcgatatgc tgctggacat
     4681 gctcaaggcg gaaggttatt tcctctgtat cgaaaccaac ggactcaatc ccgcgccgcc
     4741 gcaaatcgac tatgtcgcca ccagccccaa agcctgctac gccgccaaat atgaaaatag
     4801 ctgtatcgaa acagccgacg aagtgcggat tgttgccgat ggtgatgtcc ttgcgttctg
     4861 cgaaaacatg gaacgtaaaa tccgcgcgca tcattactac ctttcgccct gcgaacaaga
     4921 cggtgcgatg aacatctacg acaccatccg ccaaatcggt attttaaaca gtcgccccga
     4981 cgcgccggtg cattggcagt tgagcgtgca gacgcacaaa tgggcgggaa tagagtagtt
     5041 taagcagtgt aactcaaagg gccggcgtac cgttttgccg atgtctaaca tatgggaaaa
     5101 gtgtgccgct tccgcgtgaa actgcccaca tttccgctgc ctgattgagg cggaacctta
     5161 ctgaataaga tgccgccgtt gggtacaagc ccggcttcct aaattccgat ggtcttttga
     5221 accttgccga tactctgtgc cagtgcgcgc aaatggcagg gttagggaaa acgaaatgcc
     5281 gtctgaaaca gcat
//
LOCUS       DAWITQ010000140         5285 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.140, whole genome shotgun sequence.
ACCESSION   DAWITQ010000140 DAWITQ010000000
VERSION     DAWITQ010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5285)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5285)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5285
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.140"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            115..810
                     /gene="pgl"
                     /locus_tag="WIX18_001755"
     CDS             115..810
                     /gene="pgl"
                     /locus_tag="WIX18_001755"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HEZ5238822.1"
                     /translation="MFVWHEYENAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRS
                     PIAFFNALSQKDLDWKNVGITLADERIVPTVHADSNTGLVREYLLKNKAEAAMWIPMV
                     EDGKTETELHPDAVVDYALKHYKQPDVLVLGMGNDGHTASIFPKAPQFQTAIDGSAGV
                     ALVHTTPVTAPHERVSMTLDAIAHTGHVFLAIRGEEKKAVFDQAAQGENREYPINLVL
                     NHQGVNCHVFYAE"
     gene            791..1777
                     /locus_tag="WIX18_001756"
     CDS             791..1777
                     /locus_tag="WIX18_001756"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HEZ5238823.1"
                     /translation="MSSTPNKQAGYPRLVADIGGTNARFALETAPRVIEKAAVLPCKD
                     YDTVTDAVRAYLNQSGATAVRHAAFAIANPILGDWVQMTNHHWAFSIETTRQTLGLDT
                     LILLNDFTAQALAVTQTSSKDLMQVGGQKPVEFAPKAVIGPGTGLGVSGLVHSHAGWV
                     ALAGEGGHTSFPPFDDMEVLIWQYAKNKYGHVSAERFLSGAGLSLVYEALAAKQKAKP
                     AKLMPSEITEKALSGASPLCRQTLDIFCAMLGTVASNLALTLGARGGVYLCGGIIPRV
                     LEYFKTSPFRSRFENKGRFEAYLAAIPVYVVLSEFPGISGAAAALDNHLRNV"
     gene            1827..2675
                     /gene="hexR"
                     /locus_tag="WIX18_001757"
     CDS             1827..2675
                     /gene="hexR"
                     /locus_tag="WIX18_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HexR"
                     /protein_id="HEZ5238824.1"
                     /translation="MLSKISESLANLSGAERKVAECALAEPKWFVHAAVAEIAERASV
                     SQPTVIRFCRSLGYKGLPEFKLALSASIGHEGMPYVHEELNADDDMASVVEKVLGNAA
                     ASLLGERRFLKESELENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYV
                     DTHTQLMAASVLSDQDVLVAISNTGSSIELLDAVSIAKENGASVIALTRNDSPLAQLA
                     DCVLSVATQENAELYTPMVSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKSIHNKH
                     IDYDKD"
     gene            2796..4442
                     /gene="pgi"
                     /locus_tag="WIX18_001758"
     CDS             2796..4442
                     /gene="pgi"
                     /locus_tag="WIX18_001758"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEZ5238825.1"
                     /translation="MKHLHDLPAWSKLWNHFDDSKTLHMREMFEQDPQRAERYWLQVG
                     GLTLDYSKNRINDETMSLLFELAREAGVPERMRQMFHGEKINTTENRAVLHVALRNRT
                     NSPIVVDGEDVMPKVNRVLQRMGEFAHEVRSGSWLGYTNQVITDVVNIGIGGSDLGPL
                     MMCTALKPFGHPRLNMHFVSNVDGSQLRDVLSKVHPETTLFIIASKTFTTQETLTNAL
                     TAREWFLNHAGDEEAVAKHFAAVSTNQKAVAEFGIDTANMFEFWDWVGGRYSLWSAIG
                     LPIMLYLGEENFIEMLNGAHLMDQHFINTPLERNLPVILALIGIWYINYYGGGSHVIA
                     PYDQHLHRLPKFIQQLDMESNGKQVTLDGKAVGHETSPIIWGETGINGQHAFFQLLHQ
                     GTHITPIDLIASLEKRSNLPGHHEILLANVFAQAEAFMRGKTPDEVRAELKAQGMDEA
                     RIEELVPHKTFSGNRPTNLILMDKVNPRNMGSLIAMYEHKTFVQGIIWGINSFDQWGV
                     ELGKQLAKTILGELTGETGPQKHDSSTERLINLYLQTNRK"
     gene            4456..5007
                     /locus_tag="WIX18_001759"
     CDS             4456..5007
                     /locus_tag="WIX18_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1311 domain-containing protein"
                     /protein_id="HEZ5238826.1"
                     /translation="MPSERRPFQTAFLSNRKTVGKLAERVQSRYDGLHKFKHICSAAM
                     ALIKEPLDKAKQRNEELEAAEEAAAQEALGREQEVDRVSEWEERYKLSRSEFEQFWKG
                     LPQTVQNKLQASQKTWKSGMDKICANNAKAEGETPNGIKFSELACKTAETEARLEELH
                     NRKKALIDEMAREADKKELPKRL"
BASE COUNT         1343 a         1473 c         1398 g         1071 t
ORIGIN      
        1 aaaaagcagt cccgatattt ggtatcaaaa gcataaacaa ctgttcggcc gacatattgc
       61 tcaacccgtt tccataacgg aatatgccgt ctgaaataaa aaaaggacac aaatatgttt
      121 gtttggcacg aatacgaaaa tgcggcagaa gcggcgcagt ctttggctga cgcagtggcg
      181 gatgctttgc agggcgcact ggacgagaag ggcggtgcgg tgttggcagt ttccggcgga
      241 cgttcgccga ttgcattttt caacgccctg tcgcaaaaag atttggattg gaaaaacgtc
      301 ggcatcacct tggcagatga acgcatcgtg ccgaccgtcc acgccgacag caataccggt
      361 ttggtgcgcg aatacctgtt gaagaacaaa gcggaagcgg caatgtggat tcctatggtg
      421 gaagacggaa aaactgaaac cgaattacat cccgatgctg ttgtcgatta tgcactgaaa
      481 cattacaaac agcccgatgt tttggttttg ggtatgggaa acgacgggca tacggcttcg
      541 attttcccga aagctccgca gtttcagacg gcaatcgacg gttcggcagg tgtcgcgctg
      601 gtgcatacca cgcccgttac cgcgccgcac gagcgcgtca gtatgacctt ggatgcgatt
      661 gcccatacgg ggcatgtgtt tttggcgata cggggcgaag agaaaaaagc cgtgttcgac
      721 caagccgcac aaggcgaaaa ccgcgaatat ccgatcaacc tcgttttgaa ccatcaagga
      781 gtgaactgcc atgtcttcta cgccgaataa acaagccgga tatccccgac tggtcgccga
      841 tatcggcggg acgaatgcac gctttgcgct ggaaaccgcg ccgcgcgtca ttgaaaaagc
      901 cgccgtgctt ccgtgtaaag actacgatac ggttaccgat gcggtgcgtg cctatctgaa
      961 tcaaagcggt gcaacagccg tacggcacgc ggcatttgcc atcgccaacc cgattttggg
     1021 cgactgggtg cagatgacca accaccattg ggcgttttcc atcgaaacca cccgtcagac
     1081 tttggggctg gacaccctca tccttttgaa cgactttacc gcgcaggcat tggcggtaac
     1141 gcagacttca agcaaagacc tgatgcaggt aggcgggcaa aagcctgtcg aatttgcccc
     1201 caaagccgtt atcggccccg gtaccggcct gggcgtgagc ggattggtgc acagccacgc
     1261 aggctgggtg gctttggcgg gcgagggcgg gcataccagt ttcccgccgt ttgacgatat
     1321 ggaagtgctg atttggcagt acgccaaaaa caaatacggc catgtttccg ccgaacgctt
     1381 tttgagcggc gcgggcttga gcttggttta cgaggctttg gctgcaaaac agaaagccaa
     1441 acccgccaaa ctgatgccgt ctgaaatcac ggaaaaggct ttgagcggcg cgtcgccttt
     1501 gtgccgtcag actttggaca tcttctgcgc catgctcggc acggttgctt ccaacctcgc
     1561 cctgacgctg ggcgcgcgcg gcggcgtgta cctgtgcggc ggcattattc cccgcgtgtt
     1621 ggaatatttc aaaacttccc cgttccgcag ccgtttcgag aacaagggca ggtttgaagc
     1681 atatcttgcc gcgattcccg tgtatgtcgt cttgagcgag tttcccggaa tttccggtgc
     1741 ggctgcggct ctcgacaacc atttgagaaa cgtttaacca cagcggctcc ttgcagcggg
     1801 gctgcattat cgaagggcat atcattatgt taagcaaaat cagtgaatca ctggcaaacc
     1861 tttccggtgc ggaacgcaaa gtcgccgaat gtgcattggc ggaacccaaa tggttcgtcc
     1921 atgccgccgt tgccgaaatt gccgaacgtg cgtccgtcag ccagccgacc gtcatccgat
     1981 tctgccgcag cttgggttat aaagggctgc ccgagttcaa gctcgccttg tccgccagca
     2041 tcggtcatga gggtatgccc tatgtccacg aagaactcaa cgccgacgac gatatggcaa
     2101 gcgtggtcga gaaagtgttg ggcaatgccg ccgcctcgct gttgggcgaa cgccgcttcc
     2161 tgaaagagtc ggagctggaa aacgccattg ccacgctgat gcacgcccgt cgcgtcgagt
     2221 tttacggtgt cggcaattcc ggcattgtgg cacaggacgc gcagcataaa tttttccgtt
     2281 tcggcatgtc caccgtcgcc tatgtcgata cgcacacgca gctgatggcg gcatctgttt
     2341 tgagcgatca ggatgttttg gttgccattt ccaacacggg ttcgtctatc gaacttttgg
     2401 atgcggtcag catcgccaaa gaaaacggcg cgtctgtcat cgcactgacc cgcaacgatt
     2461 cgcctctggc gcaacttgcc gactgcgtgt tgagcgttgc cacacaggaa aatgccgaac
     2521 tctacacgcc catggtttcc cgcctcttgc agcttgccgt catcgacatt ctcgccatcg
     2581 gacttgccct gcgcttgggc gatgctgcca gcctgcaatt gcagaaaagc aaaaaaagca
     2641 tacacaacaa gcacatcgat tacgacaaag attgaccttc agacggcatc ccacaaatgc
     2701 cgtctgaaat gccgaacaac ggtcgtcggc ggcttgcggc agtttccggc agccttttca
     2761 tcccacaaca aaaaacctca ttcaggagca tatagatgaa acaccttcac gacttacccg
     2821 catggtcgaa attgtggaac cactttgacg acagcaaaac attgcatatg cgcgaaatgt
     2881 tcgagcaaga cccgcagcgt gcggaacgct actggctgca agtcggcgga ctgacgctgg
     2941 actactccaa aaaccgcatc aacgacgaaa ccatgtcgct tttgttcgag cttgcccgag
     3001 aagcaggcgt gccggagcgg atgcggcaga tgttccacgg cgaaaaaatc aataccaccg
     3061 aaaaccgcgc cgtcctgcat gtcgcccttc gcaaccgcac caattcgccg attgtggttg
     3121 acggtgaaga tgtgatgccc aaagtcaacc gcgttttgca acgtatgggc gaatttgcac
     3181 acgaagtccg cagcggaagc tggctgggct ataccaacca agtcattacc gacgttgtca
     3241 acatcggcat cggcggatcg gatttgggcc cgctgatgat gtgtaccgcg ctcaaacctt
     3301 tcggtcatcc gcgcctcaat atgcacttcg tctccaacgt ggacggctcg caactgcgcg
     3361 acgtattgtc caaagtccac cccgaaacca cgctgttcat catcgcctcc aaaacattta
     3421 ccacgcagga aacgctgacc aacgcgctga ccgcgcgcga atggtttttg aatcatgcgg
     3481 gcgacgaaga agccgttgcc aaacacttcg ccgccgtttc caccaatcaa aaagccgtcg
     3541 ccgaattcgg catcgacacc gccaatatgt ttgaattttg ggattgggtc ggcggtcggt
     3601 acagcctgtg gtccgccatc ggattgccga ttatgctgta tctcggcgaa gaaaacttca
     3661 ttgaaatgct caacggcgcg cacctgatgg accaacactt catcaacaca ccgctcgagc
     3721 gcaacctgcc cgtcattctc gccctcatcg gcatctggta tatcaactac tacggcggcg
     3781 gcagccacgt catcgcgcct tacgaccaac atttgcaccg cctgcccaaa ttcatccagc
     3841 agctcgatat ggaaagcaac ggcaaacagg ttacgttgga cggcaaagca gtcggacacg
     3901 aaacctcgcc gattatctgg ggcgaaacgg gcattaacgg ccagcacgcc ttcttccaac
     3961 tgctgcacca aggcacgcac attaccccca tcgacctgat tgcctcgctt gaaaaacgca
     4021 gcaacctgcc cggacaccac gaaatcctgc ttgccaacgt cttcgcccaa gcagaagcct
     4081 ttatgcgcgg caaaaccccc gacgaagtcc gtgccgaact caaagcgcag ggtatggatg
     4141 aggcgcgcat cgaagagctg gtcccgcaca aaaccttctc cggcaaccgc ccgaccaacc
     4201 tcattctcat ggacaaggtc aacccgcgca atatgggcag cctgattgcc atgtacgaac
     4261 acaaaacctt cgtacaaggc atcatttggg gcatcaacag cttcgaccag tggggcgtgg
     4321 aactcggcaa acaactggct aaaaccattt tgggcgaact gaccggcgaa accgggccgc
     4381 aaaagcacga cagttcgacc gaacgcctga tcaacctcta cctgcagacc aaccgcaaat
     4441 aaaacctgcg gaaaaatgcc gtctgaacgc cgaccgtttc aaacggcatt tttatcgaac
     4501 aggaaaaccg tcggtaaact tgcagagcgt gtgcaatccc gatatgatgg tttgcataaa
     4561 tttaaacata tatgttccgc agctatggca ctgattaaag agccgttgga caaagcgaaa
     4621 caaaggaacg aagaacttga agcggcagaa gaagcggcgg cgcaggaggc attgggtcgg
     4681 gagcaggaag tcgaccgcgt atccgaatgg gaagaacgct acaagctgtc gcgcagcgag
     4741 ttcgagcaat tctggaaagg attgcctcaa accgtacaga ataagctgca agcctcacag
     4801 aaaacatgga aaagcgggat ggataaaatc tgtgccaaca atgcgaaagc tgaaggtgaa
     4861 acgccaaacg gcataaaatt cagcgaactg gcatgcaaaa cggcggaaac cgaagcacgc
     4921 ttggaagagc tgcacaaccg taaaaaagcc cttatcgacg aaatggccag ggaagcggac
     4981 aagaaagaac tgccaaagcg gctctgaaca gcgcggttca ggcactgccc gccgatattg
     5041 ccgaaaccgt catgcccgag taccgcaact gacaaaacgg tttgaatgcc aaatgcgccg
     5101 acggcgacga atacggcgtg gcacaatctg actgccgtac cagagaaatc aatgcgaaaa
     5161 ccaaagaaat ccaaggttat ctgattgact gaaacttgga tgcgggaatg tcggcggctt
     5221 ttgcgttttt gtcgttttta tagtgaatta aatttaaacc gatacagcgt tggctcgcct
     5281 tagct
//
LOCUS       DAWITQ010000141         5267 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.141, whole genome shotgun sequence.
ACCESSION   DAWITQ010000141 DAWITQ010000000
VERSION     DAWITQ010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5267)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5267)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5267
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.141"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(103..2937)
                     /gene="lbpA"
                     /locus_tag="WIX18_001760"
                     /gene_synonym="tbpA"
     CDS             complement(103..2937)
                     /gene="lbpA"
                     /locus_tag="WIX18_001760"
                     /gene_synonym="tbpA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoferrin/transferrin-binding protein LbpA"
                     /protein_id="HEZ5238827.1"
                     /translation="MNKKHGFQLTLTALAVAAAFPSYAANPETAAPDAAQTQSLKEVT
                     VRAAKVGRRSKEATGLGKIVKTSETLNKEQVLGIRDLTRYDPGVAVVEQGNGASGGYS
                     IRGVDKNRVAVSVDGVAQIQAFTVQGSLSGYGGRGGSGAINEIEYENISTVEIDKGAG
                     SSDHGSGALGGAVAFRTKEAADLISDGKSWGIQAKTAYGSKNRQFMKSLGAGFSKDGW
                     EGLLIRTERQGRETHPHGDIADGVAYGINRLDAFRQTYGIKKPSEGGEYFLAEGESEL
                     KPVAKVAGNGNYLNNQLNRWVKERIEQNQPLSAEEEAMVREAQARHENLSAQAYTGGG
                     RILPDPMDYRSGSWLAKLGYRFGGRHYVGGVFEDTKQRYDIRDMTEKQYYGTDEAKKF
                     RDKSGVYDGDDFRDGLYFVPNIEEWKGDKKLVRGIGLKYSRTKFIDEHHRRRRMGLLY
                     RYENEAYSDNWADKAVLSFDKQGVATDNNTLKLNCAVYPAVDKSCRASADKPYSYDSS
                     DRFHYREQHNVLNASFEKSLKNKWTKHHLTLGFGYDASNAISRPEQLSHNAARISEST
                     GFDEKNQDKYRLGKPEVVEGSVCGYIETLRSRKCVPRKINGSNIHISLNDRFSIGKYF
                     DFSLGGRYDRKNFTTSEELVRSGRYVDRSWNSGIVFKPNRHFSLSYRASSGFRTPSFQ
                     ELFGIDIYHDYPKGWQRPALKSEKAANREIGLQWKGDFGFLEISSFRNRYTDMIAVAD
                     HKTKLPNQAGQLTEIDIRDYYNAQNMSLQGVNILGKIDWNGVYGKLPEGLYTTLAYNR
                     IKPKSVSNRPDLSLRSYALDAVQPSRYVLGFGYDQPEGKWGANIMLTYSKGKNPDELA
                     YLAGDQKRYSTKRASSSWSTADVSAYLNLKKRLTLRAAIYNIGNYRYVTWESLRQTAE
                     STANRHGGDSNYGRYAAPGRNFSLALEMKF"
     gene            complement(2934..5111)
                     /locus_tag="WIX18_001761"
     CDS             complement(2934..5111)
                     /locus_tag="WIX18_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HEZ5238828.1"
                     /translation="MCKPNYGGIVLLPLLLASCIGGNFGVQPVVESTPTAYPVTFKSK
                     DVPTSPPAGSSVETTPVNRPAVGAAMRLPRRNIATFDKNGNEIPNRKQAEEYLPLKEE
                     DILFLDGTPQEQADKLKKEINERYPDVKVITSTNEDAKYNYRFVRAGYVFTKGGRYDN
                     EKEKTPDGKEFVNRFSYDGFVYYSGEHPSQSLPRTETVQYSGNWQFVTDAKRWRTQND
                     GGGINLGFSHFYGNDIGATSYAARDVDDREKHPAKYTVDFGNKTLTGELIKNQYVKPN
                     EQQKPLTIYNITADLNGNRFTGSASVNPDLATNHANKEHLFFHTNADQRLEGGFFGDK
                     GEELAGRFISNDNSVFGVFAGKQKTEAANAADTKPALPSGKHTKILDSLKISVDEAAD
                     KKARPFEVSSMPDFGHPDKLLVEGREISLVKDTQTIDLADGRKMTVSACCDFLTYVKL
                     GRIKTDRPASKPKAEDENSEDEIGESEENEEDLVAEEENTEDEVVEDEDREEDEVSED
                     GNSEDEEEIAEEDDDEAEEEEVEETEEESPVEESGGDSGSILPTPEAPKGRDIDLFLK
                     GIRTAEADIPKTGTAHYTGTWEARIGVPDKKDDQLYGTTFIQKDSYANQGAKAQFTVD
                     FGKKSISGTLTEKNDTHPAVYIEKGVIDGNGFHATARTRDNGIDLSGQGSTNPQRFEA
                     NNLLVTGGFYGPQAAELGGNIIDSDRKIGVVFGAKKDNKEVEK"
BASE COUNT         1124 a         1419 c         1229 g         1495 t
ORIGIN      
        1 ggaaatcttg tttatatcga atcaaaaaaa cctgcacctt aatcagttgg cggtttagtc
       61 cgacttttgg ggtgcagatc aagctttcag acggtatttc ctttaaaact tcatttcgag
      121 cgcgaggctg aagttcctgc ccggtgcggc ataccttcca tagttgctgt cgccgccgtg
      181 ccggtttgcc gtgctttccg cagtctggcg caaggattcc caagtaacgt agcggtagtt
      241 gccgatattg tagatagccg ccctcaaggt cagccgtttt ttcagattca gataggcgga
      301 aacgtctgcc gtcgaccaag aagacgacgc tctttttgtc gaatatcgtt tttgatcgcc
      361 tgccagataa gcaagctcgt cagggttttt ccctttggaa taggtcagca taatgtttgc
      421 gccccatttc ccctctggct ggtcgtatcc gaaccccaaa acataacgcg acggctgtac
      481 cgcatccaaa gcatagctgc ggagggacaa gtccggccgg ttggataccg atttcggttt
      541 gatgcggttg tatgccaatg tggtgtacaa accttcgggc agtttgccgt acacaccgtt
      601 ccagtcgatt tttcccaata tattaacgcc ttggagcgac atattttggg cattgtaata
      661 atcgcgtata tcaatctctg tcaattgtcc tgcctgattc ggcaatttgg ttttgtgatc
      721 ggcaacggca atcatatcgg tataacggtt gcggaagctg ctgatttcca aaaagccgaa
      781 atcgcccttc cactgcaaac cgatttcgcg gttggctgcc ttttccgatt tcagggcggg
      841 acgctgccag cctttcggat aatcgtgata aatgtctatc ccgaaaagtt cttggaatga
      901 gggcgttctg aagccgctgg aggcgcggta agacaaagaa aaatgccggt tcggtttgaa
      961 cacgatgccg ctgttccacg aacggtcaac ataccgtccg ctgcggacga gttcttccga
     1021 cgtggtgaag tttttccggt cgtacctgcc acccaagctg aaatcaaaat atttgccgat
     1081 tgaaaaacgg tcgttcaaag aaatgtggat attgctgccg ttgatttttc ttggcacgca
     1141 tttgcgggaa cgcagggttt cgatgtagcc gcagaccgac ccttcgacga cttcgggctt
     1201 acccaaacgg tacttatctt gattcttttc atcgaatccc gtggattccg aaatccttgc
     1261 cgcattgtgg gaaagctgtt cagggcggga aatcgcgttg gaagcatcgt aaccgaagcc
     1321 caaagtcaga tggtgtttcg tccatttgtt tttcagcgat ttctcaaacg aggcattcaa
     1381 aacattgtgc tgttcgcggt agtggaaacg gtcgctgctg tcgtaggaat acggtttgtc
     1441 cgccgacgcg cggcaggatt tgtccacagc aggatacacg gcgcaattca gcttcagcgt
     1501 gttgttgtcg gttgccacgc cctgtttgtc aaacgacaac accgccttat ccgcccagtt
     1561 gtcagaatac gcttcgtttt cataacggta cagcaaaccc atacggcggc ggcggtgatg
     1621 ttcatcaata aatttggtgc gggaatattt caaacctatg cccctgacca actttttatc
     1681 gcccttccac tcttctatat tcggcacaaa atacaagccg tcgcggaaat cgtcgccgtc
     1741 gtacaccccg ctcttgtctc taaacttttt cgcctcgtcc gtaccgtaat actgtttttc
     1801 cgtcatatcg cggatatcgt aacgctgttt ggtatcctca aacacgccgc cgacataatg
     1861 cctgccgccg aagcggtagc ccagcttggc aagccacgaa ccgctgcggt aatccatcgg
     1921 atcgggcaat atcctgccgc cgcccgtgta agcttgggcg gacaggtttt cgtggcgcgc
     1981 ctgcgcctcc cgcaccatcg cttcttcttc agcacttaaa ggctgatttt gttcaatacg
     2041 ttcttttacc cagcggttga gctggttgtt caaatagttt ccgttgcctg ccacttttgc
     2101 cacaggcttg agctcactct cgccctccgc caggaaatat tcccctcctt cacttggttt
     2161 tttaatgccg tatgtctggc ggaacgcgtc caaacggttt atgccgtatg ccaccccatc
     2221 cgcaatatcg ccgtgcgggt gcgtttcccg cccctgacgt tcggttcgga ttagcagccc
     2281 ttcccaaccg tctttactga aacccgcgcc gagcgacttc ataaattggc ggtttttact
     2341 gccgtaggcg gtttttgcct gtatccccca gcttttgccg tctgaaatca ggtctgccgc
     2401 ctctttggtg cggaaagcga ccgcgccgcc gagtgcgccg ctgccgtgat cggacgaacc
     2461 ggcacctttg tcgatttcca ccgtgctgat gttttcatat tcgatttcgt tgattgcacc
     2521 gctgccgccg cgtccgccgt atccgctcaa cgatccctgc acggtaaacg cctgtatttg
     2581 ggcaacgccg tcaaccgaaa ccgccacacg gtttttatcc acgccgcgta tcgagtagcc
     2641 gccgctcgcg ccgttgccct gttcgacaac cgccacgccc ggatcgtagc gcgtcaggtc
     2701 gcggataccg agtacctgtt ctttgttcaa cgtttccgac gttttgacga ttttgcccaa
     2761 accggtcgcc tctttcgatc gccgtcccac tttggcagca cggacggtaa cctctttcag
     2821 ggattgggtc tgcgcggcat caggtgccgc cgtttcaggg tttgccgcat atgacgggaa
     2881 ggcggcggca acagccaagg cagtcagggt aagctgaaaa ccgtgtttct tattcatttt
     2941 tccacctctt tattatcttt cttcgcaccg aataccacgc cgattttccg gtcactgtcg
     3001 ataatattac cacccaactc tgccgcctgc ggtccataaa agccgcctgt tacaagaaga
     3061 ttgttggctt cgaagcgctg cgggttggtc gaaccctgcc cggaaaggtc aataccgtta
     3121 tcccgagtgc gtgctgtcgc gtggaaaccg ttgccatcaa tcacaccttt ttcaatataa
     3181 acagcggggt gtgtatcatt tttttctgtc aacgttccgg aaatcgattt cttgccgaaa
     3241 tcaacggtaa attgtgcttt tgccccttga tttgcatagc tatccttttg aatgaacgta
     3301 gtgccatata actgatcgtc tttcttatcc ggtacaccga tacgcgcttc ccaagtgccg
     3361 gtataatgcg ccgttccggt ttttggaatg tcggcttccg ccgtgcggat acctttcagg
     3421 aaaaggtcga tgtccctgcc tttaggggct tccggagtgg gcaggatgct gcctgaatcg
     3481 ccaccgcttt cttccaccgg cgattcttct tcggtttctt caacttcctc ctcttcggct
     3541 tcatcatcat cttcttcggc gatttcttct tcgtcttcac tgttaccatc ttcggaaact
     3601 tcgtcttctt ctctgtcttc atcttctacg acttcgtctt ccgtgttttc ttcttcagcg
     3661 accaaatcct cttcattttc ctcgctttca ccaatttcat cttcggaatt ttcatcttcc
     3721 gcctttggtt tacttgccgg gcggtcggtt tttatccgtc cgagtttcac ataggtcaaa
     3781 aagtcgcaac aagcactgac ggtcattttc ctgccgtcgg caagatcaat ggtttgagta
     3841 tctttgacca aggagatttc acgcccttcg acaagaagtt tgtcgggatg accaaaatcg
     3901 ggcatagagg aaacctcaaa cggacgggct tttttatcag ccgcctcgtc aacggaaatt
     3961 tttagagaat ccaagatttt ggtgtgtttt ccagacggca gggcaggttt tgtatctgct
     4021 gcgtttgctg cctctgtttt ttgtttgcct gcgaatacgc cgaatacgct gttgtcgttg
     4081 ctgataaacc gtccggcaag ctcttccccc ttatcgccga aaaaaccgcc ctcaagccgc
     4141 tgatcagcat tggtatggaa aaacaaatgc tccttattgg catggtttgt cgctaaatca
     4201 ggattgacac tggcactgcc ggtaaagcgg ttgccgttta aatcggcagt gatgttgtaa
     4261 atggtcagcg gtttttgctg ctcattgggt ttgacatatt ggtttttaat cagctcgccc
     4321 gtcagggttt tgttaccgaa atctaccgta tatttggcag gatgtttttc cctgtcgtcg
     4381 acatccctag cggcataaga ggttgcaccg atatcgttgc cgtaaaagtg actaaacccc
     4441 aaatttatac cgccaccatc attttgtgtc cgccaacgct tggcatcggt aacaaactgc
     4501 caattaccgg aatattgcac ggtttcagta cgcggcaggg attgagacgg atgttctcct
     4561 gaataatata caaaaccgtc ataactaaat cggttaacaa actccttacc atcaggagtc
     4621 ttttcttttt cattatcgta tcttcccccc ttggtaaaca catagcccgc acggacaaac
     4681 cgataattat attttgcatc ttcatttgtc gatgtgataa ccttcacatc aggataccgt
     4741 tcgttgattt cctttttaag tttgtcagcc tgttcttgcg gcgtaccgtc taaaaacagg
     4801 atatcctcct ctttgagcgg cagatactcc tctgcctgct tcctgttggg aatttcatta
     4861 ccatttttat caaaagttgc gatattccgc cttggcagcc gcattgccgc accgacggcg
     4921 ggccggttga ccggcgtggt ttctaccgaa gacccggcag ggggcgaagt gggaacgtcc
     4981 ttagacttga aagtgacggg gtacgcggtc ggcgttgatt cgacaacagg ctgcacgccg
     5041 aaattgccgc cgatacaaga tgccaaaagt aagggcaaca agacaatgcc gccataattc
     5101 ggtttacaca tccctacttt tcctcctatt tgattaataa taattatcat tatattaata
     5161 tgtacagata atatcaaccc gtttttatag tgaattaaca aaaatcagga caaggcgacg
     5221 agccgcagac agtacagata cattccgtca ttcccacgaa cctacat
//
LOCUS       DAWITQ010000142         5173 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.142, whole genome shotgun sequence.
ACCESSION   DAWITQ010000142 DAWITQ010000000
VERSION     DAWITQ010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5173)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5173)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5173
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.142"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(82..1338)
                     /locus_tag="WIX18_001762"
     CDS             complement(82..1338)
                     /locus_tag="WIX18_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HEZ5238829.1"
                     /translation="MNAAQLDHTAKVLAEMLTFKQPADAVLSAYFREHKKLGRQDRHE
                     IAETAFAALRHYQKISTALRRPHAQPRKAALAALVLGRSTNISQIKDLLDEEETEFLG
                     NLKARKTEFSDGLNTAAELPQWLVEQLQQHWNEEEILAFGRSINQAAPLDIRVNTLKG
                     KRDKVLPLLQAESADAEATPYSPWGIRLKNKIALNKHELFLDGTLEVQDEGSQLLALL
                     VGAKRGEIIVDFCAGAGGKTLAIGAQMANKGRIYAFDIAEKRLANLKPRMTRAGLTNI
                     HPERISSEHDTRIARLAGKADRVLVDAPCSGLGTLRRNPDLKYRQSAETVANLLEQQH
                     SILDAASKLVKPQGRLVYATCSVLPEENELQVERFLSEHPEFEPVNCAELLQSLKVDL
                     DTGKYLRLDSARHQTDGFFAAVLQRK"
     gene            complement(1686..2027)
                     /locus_tag="WIX18_001763"
     CDS             complement(1686..2027)
                     /locus_tag="WIX18_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238830.1"
                     /translation="MKNNVKNWTTKEVKQSLDKFNNILIKNTFLLQYLKKEFSASSAY
                     CLSMLPEEEDIYEILVNGNIIIDLEFNKHTNETVVINVTDVDEYLKTLTNESGRVFFT
                     LAKEIGKQKNI"
     gene            complement(2231..3088)
                     /locus_tag="WIX18_001764"
     CDS             complement(2231..3088)
                     /locus_tag="WIX18_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1853 family protein"
                     /protein_id="HEZ5238831.1"
                     /translation="MNYALDALWWKLTSQPVRDLASLLTAPPLWQSGCELGVRELLGE
                     RGFRYLLALDADPAPLTEHLTRRAPFGHRLGIYAEELLAFWFANAPHAELLAHNLTVS
                     GSDGNTQGAADFVVRLNGKPYHIELTCKYYGGGTGRLEDMRGLDPKDTLLGKAAKLTA
                     QLGLPHTSDGIRTLRQHGLPLDVKPVSIVRGIGFFPHGFHAFEPPLNPYGWRGIYIQD
                     WAEYGFKRQEVRYHLLDRMAYLAPARVAETETLNATEIRRIDQGLIAVLECRPDGFWH
                     EIERIMKAV"
     gene            complement(3149..3964)
                     /locus_tag="WIX18_001765"
     CDS             complement(3149..3964)
                     /locus_tag="WIX18_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEZ5238832.1"
                     /translation="MTTLKPALPAYLDNIRIILTRTSHPANIGSAARAMKTMGLHKLT
                     IVAPNLMATPMTENPPVFDPEHPQSFKLPEESFILASGAADVLENATIAASLDEALAD
                     TTIACALTSRRREITAPLQTPRDLVSELLQTANRGEKVALVFGNETFGLSIEEVQACN
                     RLMTINGNPDYFSLNLAQAVQVVCYEIFSQTGSPMTHLQQEDHAATHEQIKGMVAHME
                     SVMNDIGFFNRRNGERLMRRMQSLFGRANTQTEDIDILRGFFNTVSHRIHKKD"
     gene            4028..4198
                     /locus_tag="WIX18_001766"
     CDS             4028..4198
                     /locus_tag="WIX18_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238833.1"
                     /translation="MPSEMFFNNVGNLTLRLKQTRVGRYFTRFGRIYPNQINSDFAAP
                     KDCASEPAVCHP"
     gene            4208..4993
                     /locus_tag="WIX18_001767"
     CDS             4208..4993
                     /locus_tag="WIX18_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HEZ5238834.1"
                     /translation="MNPFLNTAFKAARRAGQMMIRAAGNLDAVKTDSKAFNDFVSDVD
                     RNSEIILVEALKEAYPHHKITCEESGSHGKAAAEYEWIIDPLDGTTNFLHGHPQYAIS
                     MALLHKGVLQEALVYAPERNDVYMASRGKGALLNDRRIRVSNRIELNRCLIGTGFPVV
                     DQSMMDKYLAILKDFLAKTAGGRREGAASLDLCAVATGRFDGFFEFNLKPWDIAAGAL
                     IVQEAGGIVTDMTGEDGWLESGDIVAANPKVLAQMLKIISAHV"
BASE COUNT         1160 a         1206 c         1414 g         1393 t
ORIGIN      
        1 tttttgttaa tccactataa ttgatgaaat gccgtctgaa cgctttgaaa agggttcgga
       61 cggcattttg ttcaaaccgg tttatttgcg ttgcaatacg gcggcgaaga agccgtcggt
      121 ttggtgtcgg gcggaatcga ggcgcaggta ttttccggta tccaaatcaa ccttcaggct
      181 ttgcagcagt tcggcgcagt tgacgggttc aaattcggga tgttcggaca ggaaacgttc
      241 gacttgcagc tcgttttctt ccggcaacac gctgcaggtg gcgtacacca agcggccttg
      301 cggtttcacc agtttggatg cggcatcgag gatgctgtgt tgctgttcca aaaggttggc
      361 cacggtctcg gcggattggc ggtatttgag gtcgggattg cggcgcagcg tgcctaagcc
      421 ggagcagggc gcatccacta aaacgcggtc ggctttgcct gccagtcggg caatacgggt
      481 atcgtgttca ctgctgatgc gttcagggtg gatgttggtc agtccggcac gggtcatgcg
      541 cggtttgagg ttggcaaggc gtttttcggc gatgtcgaag gcgtagattc tgcctttgtt
      601 cgccatttgc gcgccgatgg cgagggtttt gccgcctgcg ccggcacaga aatcgacaat
      661 gatttcgccg cgttttgcgc ccaccaataa agcaagcagc tggctgcctt cgtcttggac
      721 ttccagtgtg ccgtccaaaa acagctcgtg tttgttaagc gcgattttgt ttttcaggcg
      781 gatgccccaa ggcgaataag gcgttgcctc cgcatcggca ctttcggctt gcaacaatgg
      841 cagcacttta tcgcgtttgc ctttcaaggt attgacgcgg atgtcgagcg gcgcggcttg
      901 gttgatgctg cgtccgaagg cgaggatttc ttcttcgttc caatgctgtt gcagttgttc
      961 gaccagccat tgcggcaatt ctgcggcggt attcagaccg tctgaaaact cggttttgcg
     1021 ggctttcaaa ttgccgagga actctgtttc ttcttcatca agcaggtctt tgatttggct
     1081 gatgttggtg cttctgccga gaaccagtgc ggcgagtgcg gctttgcgcg gctgcgcgtg
     1141 aggacgacgc agggcggtac tgattttttg atagtggcgc agcgcggcaa aggcagtttc
     1201 ggcgatttcg tggcggtctt ggcggccgag ttttttgtgt tcgcggaaat aggcggagag
     1261 gacggcatcg gcaggctgtt tgaaagtcag catttcagcc aaaactttgg cggtatggtc
     1321 gagttgtgcg gcgttcataa tgtaatgggt tctcttactg tgggttattc ataatcaatc
     1381 taacgtcctt aaaataacaa tagcatcttt atcattactt agtattctat ccgcaataag
     1441 aaagatgtgt taaaagtgcg caatcgggat ttgtctaaat ttctccgtta actacaaagg
     1501 cagcctgaaa aaagttctat tttcaggtcg cttgaacagc atccgatata atcacatcag
     1561 cgatttcatt ttgtaatcac tccctaaaac atgaggaaaa aaacaaaatt tattttcttc
     1621 gttcagtata tctatcctaa atatgccatc actccattga gtttttaatt tgtatttcgc
     1681 tcttgttaaa tgtttttctg tttgccgatt tcttttgcta atgtaaaaaa tactctacca
     1741 ctctcattgg ttaaagtttt caagtattca tcaacatcag taacattaat aacaactgtt
     1801 tcatttgtat gtttattaaa ttctaaatca ataataatat tcccattaac caatatttca
     1861 tatatatctt cttcttcagg gagcatagac aaacaataag cacttgaagc tgaaaactct
     1921 tttttcagat actgaagaag aaaagtattt ttaattaaaa tattattaaa tttatctaat
     1981 gattgcttga cttctttagt tgtccaattt ttaacattat tcttcattgt attctacctg
     2041 gggtcgtagt tattaaatta ccatacttat ttgtttggat cgtcataata ttagttggca
     2101 tgttgttgtt atatttatca tatccaatat ccttattaac tcggatgact ctttcataaa
     2161 ttgtatggga aatgagattt ccatcactaa gcctctcaat agatatacgc gttaatgttg
     2221 ggaaagggtt tcagacggcc ttcataatgc gttcgatttc gtgccaaaag ccgtccggcc
     2281 gacattccaa aacggcaatc aagccttggt cgatacggcg gatttcggtt gcgttcaatg
     2341 tttcggtttc ggcgacacgc gcaggcgcga ggtaggccat acggtcgagc agatggtagc
     2401 ggacttcttg gcgtttaaac ccgtattccg cccaatcttg aatatagatg ccgcgccaac
     2461 cgtatggatt aagcggtggc tcaaaagcat ggaaaccgtg tggaaaaaat ccgatgccgc
     2521 gcacgatgga aacgggtttt acgtcaagcg gcagaccgtg ttgccgcaag gttcggatgc
     2581 cgtctgaagt gtgcggcaga ccgagttggg cggtcagttt ggcggctttt cccaacagcg
     2641 tgtctttggg gtcgagtccg cgcatgtctt cgagcctgcc cgtgccgccg ccgtaatatt
     2701 tgcaggtcag ctcgatatgg tagggcttgc cgttaagcct taccacaaaa tccgccgcgc
     2761 cttgcgtatt gccgtccgaa ccggaaaccg tgaggttgtg cgcgagcagt tcggcgtgtg
     2821 gcgcgttggc aaaccaaaat gccagcagtt cttcggcgta aatgccgagg cggtgtccga
     2881 acggggcgcg tcgggtgagg tgttccgtca gcggcgcggg atcggcatcc aatgccaaaa
     2941 gatagcggaa accgcgttcc cccaatagtt cgcgcacgcc caattcgcaa ccgctttgcc
     3001 acaaaggcgg cgcagtcagc agcgaggcga ggtcgcggac gggttggctg gtgagcttcc
     3061 accataatgc gtctagggcg taattcatgc ttatccgaat atcagtcatg ccgtctgaaa
     3121 agctggaaat gttttcagac ggccttaatc agtctttttt atggatacga tggctgacgg
     3181 tattgaaaaa accgcgcagg atatcgatgt cttcggtttg cgtgttggcg cgtccgaaca
     3241 ggctctgcat acggcgcatc agacgctcgc cgttgcggcg gttgaaaaag ccgatgtcgt
     3301 tcatcacgct ttccatgtgg gcgaccatgc ctttgatttg ctcgtgggtc gcagcgtggt
     3361 cttcttgttg aagatgggtc atgggcgaac cggtttggct gaagatttcg tagcacacga
     3421 cctgcacggc ttgggcgagg ttgagcgaga aatagtcggg attgccgttg atggtcatca
     3481 gtcggttgca ggcttggact tcttcgatgc tcaagccgaa agtctcgttg ccgaaaacca
     3541 gtgccacttt ctcgcctcgg tttgcggtct gcagtaattc ggataccaaa tcgcgcgggg
     3601 tttgcagcgg cgcagtaatt tcgcggcggc ggctggtcag ggcgcaggcg atggtggtgt
     3661 cggcaagggc ttcgtccaaa gaagcggcaa tggtggcatt ttccaaaacg tctgccgcgc
     3721 cggaagcgag gatgaagctt tcttccggta atttaaacga ttgaggatgc tccgggtcaa
     3781 acacgggcgg gttttccgtc atcggcgttg ccatcagatt tggggcgacg atggtcagtt
     3841 tgtgcagacc cattgttttc atcgcgcgcg cggcagagcc gatgttggcg ggatggctgg
     3901 tgcgcgtgag gatgatgcgg atgttgtcca gataagcggg cagggcgggt ttgagagtag
     3961 tcatgttcgg ttttcggtcg gaatggaata gggtataatg cgccgtcttt ttcgttcgga
     4021 cggtcaaatg ccgtctgaaa tgttctttaa caacgtcgga aatttaacgt tgcgcctgaa
     4081 gcagacacgc gtcgggcggt attttacccg atttggcagg atttacccca accaaataaa
     4141 ctccgatttt gccgctccga aggactgcgc gtccgaaccg gcggtatgcc acccttaagg
     4201 aaatctgatg aatccgtttt tgaatacagc ctttaaagcc gcccgccgtg ccggtcagat
     4261 gatgatacgc gccgcgggca atctcgatgc cgtcaaaacc gacagcaaag cattcaacga
     4321 ttttgtttcc gatgttgacc gcaattccga aatcatccta gttgaggctt tgaaagaagc
     4381 ctatccgcac cacaaaatca cttgcgaaga aagcggctcc cacggtaaag ccgcagccga
     4441 atacgaatgg attatcgatc cgctcgacgg cacgaccaac ttccttcacg gccatcccca
     4501 atacgccatc tctatggcac tcctgcacaa aggcgtgttg caagaagctt tggtgtacgc
     4561 ccccgaacgc aacgacgttt acatggcttc gcgcggcaaa ggcgcgttgc tcaatgaccg
     4621 ccgcatccgc gtttccaacc gcatcgaatt gaaccgctgc ctgatcggta ccggctttcc
     4681 tgttgtcgat caaagcatga tggacaagta tctggcgatt ttgaaagatt tcttggcaaa
     4741 aaccgccggc ggccgtcgtg aaggcgcggc ttctttggat ttgtgtgctg tggcgactgg
     4801 tcgttttgac ggctttttcg agttcaacct caaaccttgg gatattgccg caggcgcatt
     4861 gattgttcag gaagcgggcg gtatcgtaac cgatatgacg ggtgaagacg gctggctgga
     4921 aagcggcgat attgttgccg ccaatcccaa agtgctggcg caaatgttaa aaatcatttc
     4981 cgcacacgtt taaatttcag cccgctcccg ggaatgcggg aaaacgggcg ggtatgccgt
     5041 ctgaagtatc gcgccgatat ttcagacggc atttttactg gcagcggggg caggaaggtg
     5101 gaaacggcta aatgcccgaa actgccgaag atggaaaccc atatctgatt aaacggagaa
     5161 ccctgtacga ttt
//
LOCUS       DAWITQ010000143         5165 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.143, whole genome shotgun sequence.
ACCESSION   DAWITQ010000143 DAWITQ010000000
VERSION     DAWITQ010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5165)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5165)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5165
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.143"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            188..1372
                     /gene="ubiM"
                     /locus_tag="WIX18_001768"
     CDS             188..1372
                     /gene="ubiM"
                     /locus_tag="WIX18_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-demethoxyubiquinol-8 5-hydroxylase UbiM"
                     /protein_id="HEZ5238835.1"
                     /translation="MSLHSDILVVGAGPAGLSFAAELAGSGLKVTLIERSPLTVLQNP
                     PYDGREIALTHFSREIMQRLGMWDKIPENEIYPLRDAKVLNGRSDYQLHFPQPTEARG
                     EPADCLGYLISNHNIRRAAYEVVSQLDNVSILTDTVVKEVKTSDNEAQVILENGKILT
                     ARLLLAADSRFSQTRRQLGISSDMHDYSRTMFVCRMKHTLSNQHTAYECFHYGRTIAL
                     LPLEEHLTNTVITVDTDKINSVQNLSPEELAASVKEQLKARLGDMELVSSIHHYPLVG
                     MIAKRFYGKRSALIGDAAVGMHPVTAHGFNLGLSSADILAKLILEAEQRGQDIGAASL
                     LEKYSSKHMLHAHPLYHGTNMMLKLFTNETAPAKLLRGLVLRAGNNFPPLKKLITKQL
                     TG"
     gene            complement(1629..1784)
                     /gene="rpmG"
                     /locus_tag="WIX18_001769"
     CDS             complement(1629..1784)
                     /gene="rpmG"
                     /locus_tag="WIX18_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009766925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEZ5238836.1"
                     /translation="MRDKIKLESSAGTGHFYTTTKNKRTMPGKLEIKKFDPVARKHVV
                     YKETKLK"
     gene            complement(1816..2049)
                     /gene="rpmB"
                     /locus_tag="WIX18_001770"
     CDS             complement(1816..2049)
                     /gene="rpmB"
                     /locus_tag="WIX18_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007586227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HEZ5238837.1"
                     /translation="MARVCKVTGKRPMSGNNVSHANNKTKRRFLPNLQSRRFWVESEN
                     RWVRLRVSNAALRTIDKVGIDVVLADLRARGEA"
     gene            complement(2299..3825)
                     /gene="farB"
                     /locus_tag="WIX18_001771"
     CDS             complement(2299..3825)
                     /gene="farB"
                     /locus_tag="WIX18_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     permease subunit FarB"
                     /protein_id="HEZ5238838.1"
                     /translation="MDYPPLKGAALAWVTLSLGLAVFMEVLDTTIANVAVPVIAGNLG
                     AATTQGTWVITSFAVANAVSVPLTGFLAKRIGEVKLFTAAAVGFVITSWLCGIAPNLQ
                     SLVVFRILQGFIAGPLIPLSQSLLMASYPPAKRTLALALWAMTVVVAPVLGPILGGWI
                     SGNWHWGWIFFINIPIGIISAWITWKHLKYRETETVKMPTDYVGLTLMVVGIGALQMM
                     LDRGKELDWFASGEIITLGVVALVCLSYFIVWELGEKYPIVDLSLFKDRNFTVGVIAT
                     SLGFMVYMGTLTLLPLVLQTNLGYTSTWAGLAAAPVGILPVFLSPLIGRFGNKIDMRL
                     LVTASFLTFAFTFYWRTDFYADMDIGNVIWPQFWQGAGVAMFFLPLTTITLSHMKGGQ
                     IAAAGSLSNFLRVLMGGVGVSVVSTLWERREALHHTRFAEHITPYSATLHETAAHLSQ
                     QGISDIQTLGIINNTITQQGFIIGSNEIFMAGSLLFIIMIPVIWLAKPPFHSSGGGGH
                     "
     gene            complement(3849..5003)
                     /gene="farA"
                     /locus_tag="WIX18_001772"
     CDS             complement(3849..5003)
                     /gene="farA"
                     /locus_tag="WIX18_001772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     adaptor subunit FarA"
                     /protein_id="HEZ5238839.1"
                     /translation="MDTHADETKLQNTQAKRKRRLTALTLLFALAAAAAGSAFFLWWQ
                     HEEETEDAYVAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAK
                     NELIQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHA
                     RAAVSQAQAAVKAALAEESSARAALGGQVSLREQPAVQTAIGRLKDAWLNLQRTQIRA
                     PADGQVAKRSVQVGQQVAAGAPLMAVVPLSDVWVDANFKETQLRHMKIGQPAELVSDL
                     YGKQIVYRGRVAGFSAGTGSAFSLIPAQNATGNWIKVVQRVPVRIVLNREDVDRHPLR
                     IGLSMTVKVDTSAAGAPVSKTPGAALPEMESTDWSEVDRTVDEILGQSAP"
BASE COUNT         1316 a         1452 c         1239 g         1158 t
ORIGIN      
        1 ataccccaca cccgatttga tacacattaa gctgaaagta aaaatccgca tacaccctcc
       61 cctgcatatt tcttcaacag tgggttttga tataatcgcc tatctgttac agatagttca
      121 aacggcattc aaacccttac aaataccgtc tgaaatcatc ggcatccgtc tatgcaaagg
      181 atattttatg agtttacaca gcgacatcct cgtcgtcggc gcaggcccgg cgggtttaag
      241 ttttgcagcc gaacttgccg gcagcggttt gaaagttacc ctgatcgaac gcagcccact
      301 gactgttctg caaaatcctc catatgacgg acgcgaaatc gccctgaccc atttttcccg
      361 cgaaatcatg cagcgtttgg gtatgtggga caaaattccc gaaaacgaaa tctacccttt
      421 gcgcgatgcc aaagtgctga acggacgttc cgactaccag ctccactttc cccaaccgac
      481 tgaagcgcgc ggcgaacctg ccgactgttt gggctatctg atttccaacc acaatatccg
      541 ccgcgccgcc tatgaagtcg tatcacaact cgacaatgtc agcattctga ccgatacggt
      601 tgtcaaagaa gtcaaaacat ctgacaacga agcacaagtc attttggaaa acggcaaaat
      661 cctgactgca cgcctgcttt tggcggcaga cagccgcttc tcgcaaaccc gtcgacaact
      721 cggtatctcc tccgatatgc acgattacag ccgaaccatg ttcgtctgcc gtatgaaaca
      781 taccctttcc aaccaacata ccgcttacga atgcttccat tacggacgca ccatcgcact
      841 gctgccgctg gaagagcacc tgaccaatac cgtcattacc gtcgataccg ataaaatcaa
      901 cagcgttcaa aacctttcgc ccgaagaatt ggccgcaagc gtaaaagaac agctcaaggc
      961 caggctcggc gatatggaac tggtcagcag catccaccat tacccccttg tcggtatgat
     1021 tgccaaacgt ttctacggca aacgcagcgc gctgatcggc gatgcggctg tcggtatgca
     1081 ccccgttacc gcacacggtt tcaacttggg tctgtccagc gcagatattt tggcaaaact
     1141 gatactcgaa gccgagcagc gcggtcagga catcggcgcg gcttccttgt tggaaaaata
     1201 cagcagcaaa catatgctgc acgcccatcc gctttatcac gggaccaata tgatgctgaa
     1261 gctgtttacc aacgaaaccg cgccggcaaa actgctgcgc ggcttggtat tgcgtgccgg
     1321 caacaatttc ccgccgctga aaaagctgat taccaaacaa ctgaccggtt gaaaactgcc
     1381 gaaatgccgt ctgaaacgtt tcagacggca tttttgtatt atagtggatt aacaaaaatc
     1441 aggacaaggc gacgaagccg cagacagtac aaatacactt ggtgcttcag caccttagag
     1501 aatcgttctc tatccttggc agacggtttg cagcagattc gcatacggca gatgtttcaa
     1561 gcggaaaaga aacacgataa aaataaaaaa gcctccgaac agtcggaggc tttgctttca
     1621 aactgaaatt atttcagttt ggtttctttg tacactacgt gtttgcgggc aaccggatcg
     1681 aattttttaa tttccagttt gccgggcata gtgcgtttgt ttttggtagt ggtgtagaag
     1741 tgaccagtac ctgcactgga ttccagtttg attttatcgc gcattgcagt aatccttaat
     1801 taaatagtgt ttaaattaag cttcgccgcg agcacgcaaa tcagccaata cgacatcaat
     1861 gcctactttg tcgatggtac gcagagcggc gttagaaacg cgcaggcgaa cccagcggtt
     1921 ttcactttct acccaaaaac gacgtgattg caagttgggc aaaaaacggc gtttggtttt
     1981 gttgttggcg tgcgatacgt tgttgccgga catcgggcgt ttgccggtca ctttgcaaac
     2041 tcgtgccata atcagtctcc aaacttctaa aatagtaaaa cgcgatttat accacgaaaa
     2101 acagtgttag ttcaagtgtt ttaaagaaaa acggctgttt tgcgcggata atccttccga
     2161 ttgtcgcatc tgtggaacgt ttgcaggtgc gaaacagatg gggcgcgatt atagcggatt
     2221 tcgggaactg ctgcattcaa aatgccgtcc gaacatattt ccagtatttt cagacggcat
     2281 ttcaagtttt caaatccctc aatgtccacc gccgccactg ctgtggaacg gcggttttgc
     2341 cagccatatg acgggtatca tgataatgaa taacaagctg cctgccataa agatttcatt
     2401 cgatccgatg atgaagccct gctgggtaat ggtattgttg atgataccta gggtttgaat
     2461 gtcggaaatg ccttgttggg acaaatgcgc cgccgtttcg tgcaatgttg cggaataggg
     2521 cgtgatgtgt tcggcaaagc gcgtgtggtg caacgcttcg cgccgttccc acagggtgct
     2581 gacgacggat acgccgacac cgcccatcag cacgcgcagg aaattcgaca ggctgccggc
     2641 ggcggcaatc tgcccgccct tcatgtgcga cagtgtgatg gtggtcagcg gcaggaagaa
     2701 catggcaacg cctgccccct gccaaaactg cggccagatg acgttgccga tatccatgtc
     2761 ggcataaaaa tcggtgcgcc aatagaaagt aaaggcaaag gtcaggaagc tggcggttac
     2821 gagcaggcgc atatcgattt tattgccgaa cctgccgatt aacggagaca ggaagacggg
     2881 caggatgccg acgggtgcgg cggcaagccc cgcccacgtg gaggtatagc ccaggttggt
     2941 ctgcaacact aacggcagca aggtcagcgt ccccatatac accataaaac ccaatgatgt
     3001 ggcaattacg ccgacggtaa aattccgatc tttaaacagc gataaatcga caatcggata
     3061 tttttctccc aattcccaaa caataaaata cgacaaacac accagtgcga ctacgcccaa
     3121 ggtaatgatt tctccagagg cgaaccagtc gagttcctta cccctgtcca gcatcatctg
     3181 taacgcgccg ataccgacta ccatcaatgt aagcccgaca tagtcggtcg gcattttaac
     3241 ggtttccgtt tcccgatatt tcaaatgttt ccatgtaatc catgccgata tgataccgat
     3301 agggatatta atgaagaaaa tccaacccca atgccagttt ccggaaatcc aaccgccgag
     3361 tatcggcccg agaacagggg cgacaacgac ggtcattgcc cacaatgcca gtgccagcgt
     3421 ccgttttgcg ggcggatagg atgccattaa caggctttgc gacaggggaa tcagcggccc
     3481 ggcgataaag ccctgcaaga tgcggaaaac aaccagcgac tgaaggttgg gggcaatacc
     3541 gcacagccac gatgtgatga cgaaaccgac agcggcggcg gtaaacaatt tgacctcgcc
     3601 gatacgtttt gccaaaaagc ccgttaacgg cacggaaacg gcgtttgcca cagcaaaaga
     3661 agtaatgacc cacgtcccct gcgtggttgc cgcaccgagg ttgccggcga tgacgggaac
     3721 ggcgacattg gcgatagtcg tatctaaaac ttccataaat acggcaagcc ccaaagacag
     3781 cgtaacccac gccaatgccg cacccttaag cggtggataa tccattgtgt cctccgtttc
     3841 agacggcatc agggcgcgga ttgcccgagg atttcatcga ccgtccgatc gacttccgac
     3901 cagtcggtac tttccatttc cggcaatgcc gcacccggcg tttttgaaac aggcgcgcct
     3961 gcggcggaag tatccacttt aaccgtcatc gacaaaccga tacgcaacgg atgcctgtcc
     4021 acatcttcgc ggttcagcac gatacggacg gggacgcgct gcaccacttt aatccagttg
     4081 cccgttgcgt tttgcgccgg aatcagcgaa aacgcgctgc ccgtacctgc cgaaaaacct
     4141 gccaccctgc cgcgataaac aatttgtttg ccgtacaaat cggacaccag ctcggcaggc
     4201 tgtccgattt tcatatgccg caactgcgtc tctttaaaat tagcatccac ccacacatcc
     4261 gacagcggca ccaccgccat cagcggcgcg cctgccgcca cctgctgccc gacctgcacc
     4321 gaacgcttcg ccacctgacc gtccgccggc gcgcggattt gcgtccgctg aaggttcaac
     4381 cacgcatctt tcaacctgcc gattgccgtc tgaaccgccg gctgttcgcg caaagaaacc
     4441 tgaccgccca aagccgcacg tgccgaagac tcttccgcca aagccgcctt aactgccgcc
     4501 tgagcctgag acactgccgc acgggcatgt gccagctctt cggcggacac cgcgcccgat
     4561 tccgctaaag cagaccggcg gcgtaaatca tcctgcgcac gtgccaaatc cgctcggcgc
     4621 aaggcaacct gcgcccccgc ctgcgaagtg gcggcatttt gccggcggtt ttgccgcacc
     4681 gcctgaatca gctcgttttt tgcccgctcg taagccagca catcattatc gtcgtccaat
     4741 accgccagca cgtcgccttt tttcacggca tccgtatcgt cgtgcaaaac cttccgcacc
     4801 gtaccgccct tttgcggcgt aacctgaacc acgcgtccgg caacataagc gtcttccgtt
     4861 tcctcttcgt gctgccacca taaaaaaaac gccgacccgg cggctgcggc ggcaagcgcg
     4921 aacagcagcg tcaatgccgt caggcggcgt ttgcgtttgg cttgcgtgtt ttgaagtttt
     4981 gtttcgtccg cgtgcgtatc cataagattg ggttccgaat ttcctgattt catataaaca
     5041 atgttctttc aataggaagc agattctata tccgcgcaat aacgcaatca agtcagtatt
     5101 ttagatgcaa tattcaaaaa acaacgcttc aggcggcaaa actgaaaata tatttcgttt
     5161 atata
//
LOCUS       DAWITQ010000144         5032 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.144, whole genome shotgun sequence.
ACCESSION   DAWITQ010000144 DAWITQ010000000
VERSION     DAWITQ010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5032)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5032)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5032
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.144"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..868)
                     /locus_tag="WIX18_001773"
     CDS             complement(<1..868)
                     /locus_tag="WIX18_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HEZ5238840.1"
                     /translation="MRFSRFEPKGRLKQQIRFQTTFLSTSHHGNQTKAAHRHIHVGST
                     AGTTTIRSGGDTTLKGAQLIGKSVQADTRNLHIESVQDSETYQSKQQNAGAQVTVGYG
                     FSVSGSYSQSKVKADHASVTEQSGIYSGLNLNQDKATKPQTVQIVRQGEVTPYWFKVN
                     PLYAGEDGYQIKVRDNTDLKGGIITSGKSAEDKGKNLFQTATLTASDIQNHSRYEGRS
                     FGIGGSFDLNGGWDGTVTDKQGRPTDRISLAAGYGSDSDSQSSITKSGINTRNIHITD
                     EAGQLARTGRTAK"
     gene            complement(982..1458)
                     /locus_tag="WIX18_001774"
     CDS             complement(982..1458)
                     /locus_tag="WIX18_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HEZ5238841.1"
                     /translation="MRKLSISSDEGLVPIRTIQQFAEDVGVVFPASYVSLLSKHDHLY
                     PKENIFNFVNQYGENDERDISFLGYKQDLGYEDIYSYSCIDDEYGYAKKVIAFGISAN
                     GDYICFDYRKCNENPCIILMYHDDFYEDENGDTKMVTNHIADSFDAFLDMLYELSD"
     gene            complement(1461..3317)
                     /locus_tag="WIX18_001775"
                     /pseudo
     CDS             complement(1461..3317)
                     /locus_tag="WIX18_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219735.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
     gene            complement(3383..3877)
                     /locus_tag="WIX18_001776"
     CDS             complement(3383..3877)
                     /locus_tag="WIX18_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CdiI family contact-dependent growth inhibition
                     immunity protein"
                     /protein_id="HEZ5238842.1"
                     /translation="MTFKQEQDYWAGYKANERALIIQTWSGFGRYAPDHLYPPHILPL
                     DTDNETLGTTVLQALANSRTFVYDSPEDQDFFDTEKIRQRYEDWVAKLCGNLGYKTRR
                     ALFKNMMSVDIWLHNGCLKISPSRHVKLEAWDAIDADDVILSLDNSPEEIGAGLRLAL
                     SRCR"
     gene            complement(3878..4759)
                     /locus_tag="WIX18_001777"
     CDS             complement(3878..4759)
                     /locus_tag="WIX18_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238843.1"
                     /translation="MRTGAFKYGTWNSLNDIRSSYDRAATKIKGAGNMGLGATTFVGS
                     GAVGGGLCSTGIGCAAGGLIATAGMTGGYTQASEGSRQLFGTYQSDFGRKVVLSLGTP
                     IEYESPLVSDAKNLALWGLQTLITRELGNLATGVKTSLTPKTADVQRNILSQSEVGIK
                     WGKGIEGQGMPWEDYVGKGLSANARLPKNFKTFDYFDRGTGTAISAKTLDTQTTARLS
                     KPEQLYSTMKGYIDKTVNFKSYELSGVPLRADMIKQREIHLAIPAQTNKEQRLQLQRV
                     VEYGKNLNITVKITEIE"
BASE COUNT         1053 a         1249 c         1105 g         1625 t
ORIGIN      
        1 ctttggcagt cctgcctgtt cgggcaagtt gtcccgcttc gtcggtgatg tgtatgttgc
       61 gggtgttgat gccgcttttc gtgatgctgc tttgactgtc gctgtcgctg ccgtagccgg
      121 ctgccaggct tatcctgtcg gtaggcctgc cttgtttgtc ggtaaccgtg ccgtcccagc
      181 caccgttcag gtcgaaactg ccgcctatgc cgaagcttct gccttcgtag cggctgtggt
      241 tttgaatgtc gctggcagta agggtggccg tctgaaaaag gttttttcct ttgtcttcgg
      301 cactcttgcc ggaggtgatg atgccgccct tgaggtctgt gttgtctctg actttgattt
      361 gatagccgtc ttctccggca tatagtggat taactttaaa ccagtacggc gttacctcgc
      421 cttgccgtac tatctgtact gtctgcggct tcgtcgcctt gtcctgattt aaatttaatc
      481 cactataaat accactttgc tcggttacgg aggcatggtc tgctttgact ttgctttggc
      541 tgtaactgcc gcttacactg aatccataac cgacggtaac ttgtgcgccg gcgttttgtt
      601 gtttgctttg ataggtttcg ctatcttgta cgctttctat atgcaggttg cgcgtatctg
      661 cctgtacgct tttgccgatg agctgcgcac ctttgagggt ggtatccccg ccgctgcgga
      721 tggtggttgt gccggccgta ctgccgacat ggatgtggcg atgtgctgct tttgtctgat
      781 tgccgtggtg gcttgttgaa agaaaggtcg tctgaaaccg tatttgttgt ttcagacgac
      841 ctttgggctc aaaccttgag aaccgcatgc gtgcgttccg cacacatcct acttgttgag
      901 tttaggtttc atatgggcta cggcttgctg atttcagacg acctttttaa tttagttggg
      961 ttttcaactc aacctacaca cttaatctga aagttcatat agcatatcca aaaaggcatc
     1021 aaaactatct gcaatatggt tagttaccat tttcgtatcc ccattctcat cttcatagaa
     1081 atcatcatga tacatcagaa tgatacatgg attttcattg cattttctgt aatcaaaaca
     1141 gatataatcg ccattggctg aaatcccaaa agcaatcact ttttttgcat acccatattc
     1201 atcatcaata catgaatagc tataaatatc ttcatagcct aaatcttgct tataccctaa
     1261 aaatgaaatg tccctttcat cattttcacc gtattgattg acaaaattga aaatattttc
     1321 tttagggtat aaatgatcat gtttactaag aagtgataca tatgacgcgg gaaaaacgac
     1381 ccctacatct tcagcaaatt gttgaattgt tcttattgga accaatccct catctgatga
     1441 tattgatagt tttctcattt ttactgacct ttctttaacg atttttgacc agtatgccta
     1501 acagctgtat gaatactatt aggaattaac tgcatattat taggagagct ttgcgcatta
     1561 tgatgccatg tataaccagg aattttttca tttcctgctt taatcttcgt tagttgttca
     1621 ttagtaaatt gatttttggg cacttgtcca ctttcaatag ctttccataa atctttagta
     1681 gctgccctca tctgtcccgt atacgacaat gaattatcta ttttggtggt aaaatttgat
     1741 acgttatcaa atataggtaa tcccctatta tcataggcga tattaacagc cttactttcc
     1801 cctgatatag gatctttata tttaacatta actacctttc cacttttatt agtatataca
     1861 atagatgagt agtccggttt agtttgatta ttgatacttt ggaccggttt ctttggaatc
     1921 gtagtggata caatattctc agctccatat cttttttcca gtttagctcg aatttgtctc
     1981 gaatcataag gcaggtcaac tccactgtgg gtttgatcta ttgcggcttt cattttttcc
     2041 gtatttttag cggctttggc tgcctgatta tttccacttc ctcctccttc aactctaaaa
     2101 taagtttccg tacgcttttg taccagtggt ttatgtgttt ccgctgtctt aatgctttta
     2161 gctaatttag agggtacatt aacaaccttt gacggcaaac tccggcccaa agacacagct
     2221 gctaccgctt tttccgtcat atcctctgcc tgtttgccga tggcgcgctc aacagggttc
     2281 tcgtatggaa taagttcttt gccccagttc gaatagttcg taatgccgag tacatagtgt
     2341 ggcggacccg cctgcaggtt gttggctagg gtattgccga tgcctttacc tacacctctg
     2401 cctattgtgc cgtaggtctt ttcttcaata gttctgttcc tttgcgcttc ggtatggacc
     2461 ggattctgtc ccaactttgc tcttagatct cgatagcctg tatgttcggc aaatttaccg
     2521 ctgtccctgt aatacttcat cggggcaaaa tccaggaacg tttccccgtc ggctttgaaa
     2581 cttcccgcta tgctgcgcag gaattgttcc gccgccgtgt cggtgtcggc atgtttggca
     2641 taataagccg catcgacctg acgcatagct tgtgccacca gccgctcttc tgcctgccgt
     2701 tgggaaatgc cgggatggag tttggcaaat ttagcggcat tatttttaat ttttctgatc
     2761 tcgctgttgt gcagctgcct attgttccaa tcgacattcg cccctactgc cgccgtgccg
     2821 acattcccgc ccgccgcata gccgattgcc gccccgccca gtgcgttgac cgccgctttg
     2881 cccgccggac cgaggttttc cgccgctttg tccaaatacg gtgcagcaag ggaagtgccg
     2941 ctgccggcca gtatgccgcc gaggctgccg gtcgtcagtc cgcctgccgc cccgtgcagt
     3001 atgctcctgc ctatgccgcc ttctttccag gtgtcgtagc ggctttggtt ttcggaaagg
     3061 taggcgttta cttggccgag ggatgcacgg atggcggctt tttcggcttc gctgtccgtg
     3121 ttttgcagtt cggcctccag cagggttcgg gcttcctgat accgttcgta actttgggta
     3181 ttgccgagtt tgtcggcaac ggccgctacg gcttgggcgg cgtttctgcc gaactccttc
     3241 gttacttccc tttgcaggtt gatctctttg gcgaccgcgt ctttgtcgaa gctgtttttc
     3301 agacggcctg tgtgttgttt tacagaaaag taaaggtcgt ctgaaagggt ttaccagctt
     3361 tcagacgacc ttttgtcaaa tattatcggc agcggctcaa tgccaacctt aaacctgctc
     3421 cgatttcttc agggctgtta tccaatgata aaattacatc gtctgcatca atggcatccc
     3481 acgcttccag cttgacatgg cggctcgggc tgattttcag gcagccgttg tgcagccaaa
     3541 tatccacgct catcatgttt ttaaataggg cgcgtctggt tttatagccc aagttcccgc
     3601 atagcttggc aacccaatcc tcatagcgtt gccgaatttt ttcggtatca aaaaaatctt
     3661 ggtcttctgg actgtcataa acgaaagtcc tgctgtttgc caatgcttgc aagaccgttg
     3721 tgcctaaagt ttcattgtcg gtatccaatg gcaggatatg ggggggatat aggtggtctg
     3781 gagcatatcg cccaaatcct gaccatgttt gaataatcaa ggctctttca tttgccttat
     3841 agccagccca ataatcttgt tcttgtttga aagtcattta ttcgatctcc gtaattttga
     3901 ctgtaatgtt tagatttttg ccatactcta ccacgcgttg caactgcaat ctttgctcct
     3961 tattagtttg tgcgggtatg gccagatgga tttcgcgctg tttgatcatg tcggccctta
     4021 acggtactcc tgataattca taacttttga aatttaccgt cttatcgatg taccctttca
     4081 tggtgctgta aagctgttcg ggtttggaca ggcgtgccgt agtttgcgta tccagagttt
     4141 tggcactgat tgccgtgcct gtaccacgat caaaataatc aaatgtttta aaatttttag
     4201 gtaaccttgc attggcagac aagcccttac cgacataatc ctcccaaggc attccctgtc
     4261 cttcaatccc cttgccccac ttgataccga cttcggattg ggacaggata tttcgctgta
     4321 cgtcagcagt tttcggagtc aaggaagttt tcacccccgt tgccaagttt cccaattcgc
     4381 gcgtaatcag cgtttgcaat ccccataagg ctagattttt cgcatcagat actaacggtg
     4441 attcgtattc tattggtgta cccaaagata ggacaacttt tctaccgaaa tcggactggt
     4501 aagtgccaaa caattgccgg cttccttctg aggcctgtgt ataaccaccg gtcatacctg
     4561 ccgttgcaat aagtccaccg gccgcacagc caatcccggt actgcacaga cctccgccca
     4621 cagcacccga accgacaaaa gtcgttgcac ccaatcccat attgcccgcc cccttaattt
     4681 tggtggcagc tcggtcgtaa ctgctgcgta tatcattcag gctgttccat gtcccatatt
     4741 taaatgcacc cgtccgcatc aatacgtttt gttccgctac aaactgttta ccggcatctt
     4801 ggaggttttt cagtccttta taaagaggat cgaagtcagg tacgccttca gcgcactggg
     4861 ttaatgcaca tgcagcggct tttaggcggt actgttcttc agccgatttg ccttttgaca
     4921 gtttgttaag gatttgtgtt tctttcggat acagctgcct attgttccaa tcgacattcg
     4981 cccctactgc cgccgtaccg acattcccgc ccgccgcata gccgattgcc gc
//
LOCUS       DAWITQ010000145         4996 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.145, whole genome shotgun sequence.
ACCESSION   DAWITQ010000145 DAWITQ010000000
VERSION     DAWITQ010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4996)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4996)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4996
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.145"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(29..670)
                     /locus_tag="WIX18_001778"
     CDS             complement(29..670)
                     /locus_tag="WIX18_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HEZ5238844.1"
                     /translation="MPSEKPMNRRTFLLGAGALLLTACGRKSARTHAKIPEGSTVLAL
                     GDSLTFGYGANPGESYPAQLQKLTGWNIVNGGVSGDTSAQALSRLPALLARKPKLVIV
                     GIGGNDFLRKVPKEQTRANIAKIIETVQKENIPAVLVGVPHITLGALFGHLNDHPLYE
                     DLSEEYGIPLFGGAWAEILGDNNLKSDQIHANGKGYRKFAEDLNQFLRKQGFR"
     gene            complement(660..1211)
                     /locus_tag="WIX18_001779"
     CDS             complement(660..1211)
                     /locus_tag="WIX18_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEZ5238845.1"
                     /translation="MNYCEFAASLPENTDNPNKHYHDTQYGFPIDSDNGLFERLVLEI
                     NQAGLSWTLMLKKRQAFQTAFEGFDINTVAAFDDTDRERLLADAGIVRNRLKIDAAIF
                     NARQIQALQQEYGSFKNWLDAHHPRSKDEWVKLFKKHFKFVGGEIVGEFLMSTGYLKG
                     AHAESCPVYRETLKYHPKWLDAI"
     gene            complement(1215..1733)
                     /locus_tag="WIX18_001780"
     CDS             complement(1215..1733)
                     /locus_tag="WIX18_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HEZ5238846.1"
                     /translation="MRLFPIAAALTLAACGTVQSTQYFVLPDSRYIRPATQGGETAVE
                     VRLAEPLKRGGLVYQTDPYRLNTAQNHVWADTLDDMLEAALSNAFNRLDNTRIFVPAS
                     RSGSTEKWTVYIDAFQGSYTGKTLISGYAVLPDGTNRPFHIETEQQGDGYAAMTAALE
                     QGLKQAAQQMVE"
     gene            complement(1733..3394)
                     /gene="pqiB"
                     /locus_tag="WIX18_001781"
     CDS             complement(1733..3394)
                     /gene="pqiB"
                     /locus_tag="WIX18_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intermembrane transport protein PqiB"
                     /protein_id="HEZ5238847.1"
                     /translation="MTDNSPPPNGHAQARVRKNNTFLSAVWLVPLIALIAGGWLWVKE
                     IRNRGPVVTLLMDSAEGIEVNNTVIKVLSIDVGRVTRIKLRDDQKGVEVTAQLNADVS
                     GLIRSDTQFWVVKPRIDQSGVTGLGTLLSGSYIAFTPGKSDEAKDVFQVQDIPPVTAI
                     GQSGLRLNLIGKNDRILNVNSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKL
                     IHSASRFWLESGINIETTGSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTL
                     YDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLH
                     LFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMI
                     ELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQVKLADLLDKFGKLPLDKTVAELN
                     GSLAELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRTTLQGVSPQSPIYG
                     DVQNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKDPIPKGSR"
     gene            complement(3387..4760)
                     /locus_tag="WIX18_001782"
     CDS             complement(3387..4760)
                     /locus_tag="WIX18_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HEZ5238848.1"
                     /translation="MHPDWVYRLFSFIMPPLIFATFPMKPFAENIPHSLRGNCCDEAL
                     PPHTVDCPECGCRADVPRLDSGEAAFCPRCGHKLFRVGRHPFSAPPAYAAASLILMAF
                     AYGMTYIEVGIPGAASVLSLPEMMRLMVFQDYGFLAEVMFVLTFGAPVLFLLLCLYVY
                     AALIRKQAYPALRLATRVMVRLRQAMMVDVFFVSTLVAYIKLSSVAEVRFGPAFYLMF
                     ALSVMLIRTSVSVPQHWVYFQIGRLTGDNAVQTASEGKTCCSRCLYFRDSAESPCGVC
                     GAELYRRRPKSLSISSAFLTAAVILYFPANILPIMISSNPAATEVNTILNGIAYMWDE
                     GDRLIAAVIFSASILVPVLKIAAMSVLIASARFALPTGAKKLSHLYRITEAVGRWSMI
                     DIFVIIILMCSFHTYAARVIPGSAAVYFCLVVILTMLSAYYFDPRLLWDKRASDGIAF
                     NETEKHD"
BASE COUNT         1130 a         1259 c         1407 g         1200 t
ORIGIN      
        1 aacaacttgg gtgcggataa acctttgttt atctaaaccc ctgttttctc aaaaattgat
       61 tcaaatcttc ggcaaatttc cgatagcctt tgccgttggc gtggatttgg tcggatttca
      121 gattattatc gcccaaaatt tccgcccacg cgccgccgaa cagcggaatg ccgtattcct
      181 cggacaaatc ctcatacagc ggatgatcgt tcaaatgccc gaacaacgcg cccaaggtaa
      241 tgtgcggcac gccgacgagg acggcgggga tgttttcctt ctgcacggtt tcgatgattt
      301 tcgcgatatt ggcgcgggtc tgctccttgg gaactttgcg cagaaagtcg ttgccgccta
      361 tgccgacaat cacaagcttg ggtttgcgtg ccaacagcgc gggcaggcgc gacagggctt
      421 gggcggatgt atcgcccgat acgccgccgt tgacaatatt ccaacccgtc agtttttgca
      481 gttgcgcggg gtaggattcg ccagggtttg cgccgtagcc gaaggtaagc gaatcgccca
      541 aggcaagtac ggtgcttcct tcgggaattt tggcgtgggt tcgggcggat tttctgccgc
      601 aggcggtaag gagcaacgcg cctgcgccga ggaggaaggt tcttctgttc attggttttt
      661 cagatggcat cgagccattt cgggtggtat ttcagggttt cacggtaaac cggacagctt
      721 tcggcgtgcg cgcctttgag gtagccggta ctcatcagaa attcgccgac gatttcgccg
      781 ccgacgaatt tgaaatgttt tttaaagagt ttaacccatt cgtctttgct tcgcggatgg
      841 tgcgcgtcga gccagttctt gaacgagccg tattcttgtt gcaacgcttg gatttgccgt
      901 gcattgaaaa tggcggcatc gattttcagg cggttgcgga cgatgcccgc gtcggcaagc
      961 aggcgttcgc ggtcggtgtc gtcgaaggcg gcaacggtat tgatgtcgaa accttcaaat
     1021 gccgtctgaa acgcctgccg cttcttcagc atcagcgtcc agcttaatcc tgcctgattg
     1081 atttccaaca ccagccgttc aaacagtccg ttgtcgctgt caatcggaaa accgtattgc
     1141 gtgtcgtggt aatgtttgtt cgggttatcg gtgttttcgg gaagtgaggc ggcaaattcg
     1201 caatagttca cggtttactc gaccatctgt tgcgccgcct gtttcagtcc ctgttcgagt
     1261 gcggcggtca tcgcggcgta gccgtcaccc tgctgttcgg tttcgatatg gaagggtctg
     1321 ttcgtaccgt cgggtaggac ggcgtagccg ctgatgaggg ttttgcccgt gtagctgcct
     1381 tggaatgcgt cgatatagac cgtccatttt tcggtactgc cgctgcgtga ggcaggaaca
     1441 aagatgcgtg tgttgtccaa acggttgaat gcattgctca acgccgcttc gagcatatcg
     1501 tccaaggtgt ctgcccaaac gtggttttgt gcggtgttga ggcggtaggg gtcggtttga
     1561 tagaccagtc cgccgcgttt gagcggttcg gcaagacgga cttcgacggc ggtttcgccg
     1621 ccttgtgttg caggacggat gtagcggctg tcgggcaaca cgaaatattg tgtgctttgc
     1681 acagtaccgc aggcggcaag cgtcagggcg gcggcaatcg ggaagaggcg cattatcggc
     1741 ttcctttcgg gatggggtct ttgctgctgc tgttgaaaat cagcgcgttg ggtttttctt
     1801 tcaaagtgtt aatgacgggt tgaacgtctt ttaaggtttt gtccaaactt tgcaacgtat
     1861 tttgtacgtc gccgtagata ggcgattgcg gcgatacgcc ttgcagggtt gtgcgcaact
     1921 ctttcagggt ttggttcagt tcgttcggaa tgttttgtgt ctgcggtttg ccgaccagtt
     1981 tgtcgatgga gcttagggcg gcattggcag atttgagtgt ggatttgagc tcggcaagcg
     2041 aaccgttcaa ttcggcaacc gtcttatcta aaggcagttt gccgaatttg tccagcaaat
     2101 ccgccaattt gacctgcaaa tcgtccaaac cgccgccctg ggtcgcgata acggtatcgc
     2161 ctgcataaac ggtatgcggt cgcagcttag gtgatgcgga aggctgatcg ttcaactcaa
     2221 tcattttgct tccggtcagc aggttgttgc tggagatggt ggcggtcagg cctttgttta
     2281 aggccgtctg aaattgttgt ttccaatgtt ctttgctttg ttcgtcggca ttgatttcca
     2341 aacgggaagg ttcaatgcgg atgcgtacgg gtatccagcc gttttcaaac aggtgcaggc
     2401 tgtcgttgcg gtcgaaataa ggaacgtcgg aaaccacgcc gacattcagc cctttgtact
     2461 cgacgggcga accgacggtc aggccgcgca cggattgttt gaaaaacgcg gtgtagtaca
     2521 gcgagcggtc gtcaggcagg ttggcgactt cgctgcggct gtcgtaaagc gtgaagctgt
     2581 cttcgctttt gacgttttta ctgtttttgg ttttcggcga atcaaatgaa atcgcgcccg
     2641 acagcagggc aggcagaggg gcggaattga gtttgatgcc gctgcctgtg gtttcgatat
     2701 tgatgccgct ttccagccag aaacggctgg cggaatgaat cagtttgtcg ttggggcttt
     2761 ggatgaagat ggtgtaatgc acgctttggt cggacgggtc gaaatgcgcg ctttcgactt
     2821 gcccgaccat aaagttttca tacaaaacag ggctgttgac gttgaggatg cggtcgtttt
     2881 taccaatcaa attcaagcgc agcccgcttt gcccgatggc ggtaacgggc ggaatgtcct
     2941 gcacttggaa cacgtctttt gcctcgtcgc ttttgccggg tgtaaaggcg atgtacgaac
     3001 ccgaaagcag cgtacccaaa ccggttacgc cgctttggtc gatacgcggc ttgaccaccc
     3061 aaaactgggt atcgctgcgg atgaggccgg atacgtccgc attgagttgg gcggttactt
     3121 ccacgccttt ttggtcgtcg cgcagtttga ttcgggtaac gcgtccgaca tcgatgctca
     3181 atactttgat gaccgtattg ttgacctcaa tgccttccgc gctgtccatc aagagcgtaa
     3241 ccacaggccc cctgttgcgg atttccttaa cccaaagcca gccgccggca atcagcgcga
     3301 tcagcggaac cagccagacg gcagagagga aggtgttgtt tttgcggacg cgtgcttggg
     3361 cgtgtccgtt tggaggaggg ctgttgtcag tcatgttttt ccgtttcatt gaaagcaatg
     3421 ccgtctgaag cgcgtttgtc ccaaagcagg cgcgggtcga aataataggc ggacagcatc
     3481 gtcagaatca cgaccaggca gaaatagact gccgcactgc ccggaatgac gcgcgcggca
     3541 taagtgtgga acgaacacat caaaataata atcacaaaaa tatcaatcat cgaccagcgg
     3601 ccgaccgctt cggtgatgcg gtagaggtgc gacaatttct ttgcacccgt tggcaaagcg
     3661 aagcgggcgg acgcaatcaa aaccgacatt gccgcaatct tcagtaccgg caccaaaata
     3721 ctcgcgctga aaataaccgc cgcaatcagc ctgtcgccct cgtcccacat ataagcgatg
     3781 ccgttaagga tggtattgac ctccgtggcg gcaggattgg acgaaatcat aatcggcagg
     3841 atattggcag ggaaatacaa aataaccgcc gccgtcagaa acgccgacga aatactcaga
     3901 cttttcggcc gtcggcggta cagttccgca ccgcacacgc cgcaggggga ttcggcactg
     3961 tcgcggaaat acaggcagcg gctgcaacag gttttacctt ccgatgccgt ctgaaccgca
     4021 ttatcccccg tcagccgccc gatttgaaaa tacacccaat gctggggaac cgataccgaa
     4081 gtccgaatca gcataaccga cagcgcgaac atcagataaa acgccggccc gaagcgaacc
     4141 tctgccacag acgagagctt gatatacgcc accaaagtgg aaacaaaaaa cacatccacc
     4201 atcatcgcct gtctcaagcg caccatcaca cgcgttgcca aacgcagcgc aggatacgcc
     4261 tgtttccgta tcagcgcggc atagacatac aggcacagca gcagaaacag aaccggcgcg
     4321 ccgaaagtca gcacaaacat cacttcggcc aaaaaaccat aatcctgaaa caccatcagg
     4381 cgcatcatct cgggcagcga aaggacggat gccgcacccg gtatcccgac ctcgatatac
     4441 gtcataccgt aagcaaacgc cattaaaatc agcgaagccg ccgcataggc gggcggggcg
     4501 gaaaaaggat gcctgcccac cctgaagagt ttgtgtccgc aacggggaca gaacgccgct
     4561 tctccactgt ccaaccgggg tacatccgcg cggcagccgc attccggaca atctaccgta
     4621 tgcggcggca gggcttcgtc gcagcagttg ccgcgaaggc tgtgggggat attttcggca
     4681 aacggcttca tcgggaaagt ggcaaatata agtggcggca ttataaagga aaaaaggcga
     4741 tacacccaat caggatgcaa aaccggcagg ttcggcagta tgaacaaacc cttggtgtcc
     4801 ggcaaaaata ttttttgagc ggttgtccgc cgactgccga acccatttga taaaatcccg
     4861 attctgtaaa gaatagtaaa atacctgctt aaaaacatca cgcaaatgat attttttcca
     4921 aaaatatgtg ataataaatt tcgtttatga ttctttatta tttttatagt ggattaacaa
     4981 aaatcaggac aaggcg
//
LOCUS       DAWITQ010000146         4986 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.146, whole genome shotgun sequence.
ACCESSION   DAWITQ010000146 DAWITQ010000000
VERSION     DAWITQ010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4986)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4986)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4986
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.146"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(267..962)
                     /locus_tag="WIX18_001783"
     CDS             complement(267..962)
                     /locus_tag="WIX18_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEZ5238849.1"
                     /translation="MKAMILAAGRGERMRPLTDTTPKPLLDVAGKPLIGWHLCRLKQA
                     GFTEIVINHAWLGRQIEDALGDGSAYGVNIAYSPEPAGGLETAGGIAQALPLLGGQPF
                     LVVNGDVLTDIDFTAAFQAASSLPEHISAHLWLVENPPHHPDGDFSLLPDGSVRPEVN
                     GGNGLTFSGVGIYRPEMFDGIEAGSVAKLAPVLRNEMRQNRVSGQKHTGLWLDVGTVC
                     RLKEAQALAGAWK"
     gene            complement(978..1478)
                     /gene="hpaC"
                     /locus_tag="WIX18_001784"
     CDS             complement(978..1478)
                     /gene="hpaC"
                     /locus_tag="WIX18_001784"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     reductase component"
                     /protein_id="HEZ5238850.1"
                     /translation="MADLQKTFQTSFRDAMASCAAGVHVITTDGAAGRYGITMTAVTP
                     VTDEPPTVMLCINRSARIIPILSENGSLCINTLADEHQDVAEHFAGLTGLSPEERFAY
                     HIWHRGKTGQLEIEGALAHLHGHIVGKHEIGTHFVFYVRLDEIKNCGCKRPALLYFRR
                     QFRFLD"
     gene            complement(1593..2033)
                     /gene="nadR"
                     /locus_tag="WIX18_001785"
     CDS             complement(1593..2033)
                     /gene="nadR"
                     /locus_tag="WIX18_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family adhesin repressor NadR"
                     /protein_id="HEZ5238851.1"
                     /translation="MPTQSKHASINIGLIQAREALMTQFRPILNQANITDQQWRIIRL
                     LAENGTLDFQDLANQACILRPSLTGILTRLEKAGLVVRLKPSNDQRRVFLKLTAEGEK
                     LYEEIGEEVDERYDAIEEVLGREKMLLLKDLLAELAKIEDALNS"
     gene            complement(2374..2883)
                     /locus_tag="WIX18_001786"
     CDS             complement(2374..2883)
                     /locus_tag="WIX18_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein disulfide oxidoreductase"
                     /protein_id="HEZ5238852.1"
                     /translation="MKKKLLSGIKFAVQTALVFLLVSLFLDWIRKPDEPAGAAGRPLT
                     LLSGQRLTLGQFSRDKAVLVYFWGSWCGVCRYQSPIIDDLAADGVPVVGVAVRSGSAS
                     EVAAYMAKRGLGFPTVNDEDGGLARSWRIVATPAVVLVKNGKMVHYTTGISSYWGLRA
                     RIFQADVFG"
     gene            complement(2962..3037)
                     /locus_tag="WIX18_001787"
     tRNA            complement(2962..3037)
                     /locus_tag="WIX18_001787"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3002..3004),aa:Lys,seq:ttt)
     gene            3248..4327
                     /gene="apbC"
                     /locus_tag="WIX18_001788"
     CDS             3248..4327
                     /gene="apbC"
                     /locus_tag="WIX18_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HEZ5238853.1"
                     /translation="MNIQNIRTLLDTVAVPNTARTLGGEKAVRSVEQRSDGIHIALHF
                     GFPVAHIASETADRIQEILMPLTGDTHIHLSMDTEIGTHKVQPGVTTIKGVKNIIAVA
                     SGKGGVGKSTTTANLATAMARMGARVGVLDADLYGPSQPTMLGVHDRKPDQKNQKLIP
                     VESSDGIQVMSIGFLVDTDQAVVWRGPMVSQALQQLMFQSEWDEVDYLFIDLPPGTGD
                     IQLTLSQRIPVTGSVIVTTPQDIALIDARKAVDMFRKVNIPILGVLENMSVHICTNCG
                     HSEALFGTDGGKDLAARLNVPLLGQLPLSLPVREAMDGGTPAQLFDEHPAIARIYTDA
                     AFQIALGIADKGKDFSSRFPKIVVE"
BASE COUNT         1218 a         1527 c         1219 g         1022 t
ORIGIN      
        1 acggcgggcg tgttggtgct ggcgttgaaa cgttaaaccg aatccgccat accgcctgaa
       61 accgggtttt gacaatctga cgggcggcgg tctgaacaaa gttacccaat aaaatccgac
      121 accgcgccga cggcaaaccg ccgcgcttca gatggcattt gttggacgga aagccccgaa
      181 cgccctattt tcacgcctcc acgaaaatat gccggacatc cggtcggaac cgttcggcag
      241 ccggctcggc aagccaccgt tttatttcac ttccaagccc ctgcaagggc ttgagcctct
      301 ttcagacggc ataccgtgcc gacatccagc cacaagcccg tatgcttctg accgctcacg
      361 cggttttgcc gcatttcgtt ccgcaatacg ggcgcgagtt tcgccacact gcccgcttcg
      421 attccgtcaa acatttcagg acggtaaata cccacgccgc taaatgtcaa tccgttgccg
      481 ccatttactt ccggccgcac gctgccgtcg ggcagcaggg aaaaatcgcc gtcaggatgg
      541 tgcgggggat tttccaccag ccacagatgg gcggaaatgt gctcgggcag ggacgatgcc
      601 gcctgaaacg cggcggtaaa atcgatgtcg gtcagcacgt cgccgttgac caccaaaaac
      661 ggctgcccac ccaacagcgg caatgcctgc gcgatgccgc ctgccgtttc caaaccgcct
      721 gcgggttcgg gcgaataggc gatgttcacg ccataagccg agccgtcgcc caaagcatct
      781 tctatctgcc ggcccagcca agcgtggttg atgacgattt cggtaaaccc cgcctgcttc
      841 agacggcata ggtgccaacc gattagaggc ttacccgcca catcgagcag cggcttcgga
      901 gtggtatcgg tcaaagggcg catacgctcg ccgcgtcctg ccgccagtat catcgctttc
      961 atatatctgt ccgaatatca gtctaaaaat ctaaactgcc gtctgaaata cagcagcgcg
     1021 gggcgtttgc acccgcagtt tttgatttcg tcgagcctga cgtaaaacac aaaatgcgtg
     1081 ccgatttcat gtttgccgac aatatgcccg tgcaggtgcg ccaacgcgcc ctctatttca
     1141 agttgtcccg ttttgccgcg atgccagatg tggtaggcaa accgctcttc gggcgacagc
     1201 ccggtcagcc cggcaaaatg ttcggcaaca tcctgatgtt cgtccgccag cgtattgatg
     1261 cagaggctgc cgttttccga caggatcgga atgattcgcg cactccggtt gatgcacagc
     1321 atcacggtcg gcggctcgtc cgtaaccggt gtaaccgccg tcattgtaat gccgtaacgc
     1381 cctgccgcac cgtctgtcgt gatgacatga acgcctgccg cacaagatgc catcgcatca
     1441 cggaacgaag tttgaaaagt tttctgcaaa tccgccattt ttccccttta aactgtcccc
     1501 tatataagaa tgctgcacac aaggcatccc ccatgtgcag cagttttgat tcaaaaagcc
     1561 gtcggtcgga cgtttccgcg cgttacggcg tattacgagt tcaacgcatc ctcgattttg
     1621 gcaagttctg ccaacaggtc tttaagcagc agcattttct cgcggcccag cacttcctcg
     1681 atagcgtcgt aacgctcgtc cacttcttcg ccgatttcct catacagctt ctcgccctcg
     1741 gcagtcagct tcagaaaaac acgtcgttgg tcgttggaag gtttcaggcg gacaaccaaa
     1801 cccgcttttt caaggcgggt caggataccg gtcaggctgg ggcgcaaaat gcacgcctga
     1861 ttcgccaaat cttgaaagtc cagcgtgccg ttttccgcca aaagacggat aatccgccat
     1921 tgctgatcgg taatattcgc ctgattcaga ataggcctga attgggtcat cagggcttcc
     1981 cttgcctgta tcagaccgat attgatagac gcatgttttg attgggtagg cattgtttaa
     2041 gtctccaagt tatcgaaaat caaactttca aaccgtcggg aaagcctgtg ggcgtaaatt
     2101 ttgatgcaac cgttatataa caaaacgaac atatagcaac aatacgctat aaaccgcatc
     2161 ggacgactgg gtataaaaga ctttaattcc gataatccta tctaaaaata ttttaatagt
     2221 tatatcttaa tctatttttc ccacaatcac aacaagggat tacatcggca ggcgtgccgg
     2281 ctctttccca aaaaacaaaa gccgccgcat ccgacgagca aggcatatgc cgcttgattc
     2341 tctacatagc ggaaaattta ataaaaacaa aggttaaccg aaaacatccg cctgaaaaat
     2401 tcgtgcgcgc aagccccaat aactgctgat tcccgtcgta tagtgaacca ttttcccatt
     2461 tttgaccaaa acgacggcag gcgttgcgac aatccgccaa gaccttgcca aacccccgtc
     2521 ctcatcgttg accgtcggaa agcccaagcc ccgctttgcc atatacgccg ccacttcgga
     2581 cgcgctgccg gaacgtaccg ccacgccgac gaccggaacg ccgtccgccg ccaaatcatc
     2641 gattatcggc gactgataac ggcacacgcc gcaccagctc ccccaaaaat acaccaaaac
     2701 cgccttatct cggctaaact gtcccaaagt cagccgctgc cccgacagca gggtcaaagg
     2761 ccgccctgcc gcaccggcag gttcgtcggg cttgcgtatc caatccaaaa acagcgacac
     2821 caataaaaac accaatgccg tctgaacggc aaatttgatg cccgaaagca gtttcttttt
     2881 catacgctct ctcaaacggt acgcccgcgc aaccggcagg caaacaaaaa gccaagtctc
     2941 aaaacttggc ttccggttat ttggtgggtc gtgagcgatt cgaacgctcg accaacggat
     3001 taaaagtccg ctgctctacc ggctgagcta acgacccgat aagccgtgca ttatacagca
     3061 ccatcctacc tcgtcaagca aattttacag gcttaattgc agaccactgt ttgcacggga
     3121 tattttgaca acggattttc acaatccgcc gcataccgtg taaaagttcg cacaaggaaa
     3181 agcaaaccgc ccgaaatcaa tgtacacttt ccgcccgttt cccaaactgc acacagaaac
     3241 acacattatg aacatacaaa acatccgcac cctcctcgac accgtcgccg ttccgaatac
     3301 ggcacgcacg ctcggcggcg aaaaggccgt ccgttcggtc gaacagcgtt cagacggcat
     3361 ccatatcgcc ctgcatttcg gcttccctgt cgcgcacatc gcctcagaaa cagccgaccg
     3421 catacaggaa atcctgatgc cgctgacagg cgacacacac atccatctgt ccatggacac
     3481 tgaaatcggc acacacaaag tccagcccgg cgttaccacc atcaaaggcg tgaaaaacat
     3541 catcgccgtc gcatcgggaa aaggcggcgt gggcaaatca accaccactg ccaaccttgc
     3601 caccgcgatg gcgcgcatgg gcgcacgcgt cggcgtactc gatgccgacc tttacggccc
     3661 gagccagccc acgatgctgg gcgtacacga ccgcaaaccc gatcagaaaa accaaaaact
     3721 cattcccgtc gaatcttcag acggcataca ggtcatgtct atcggctttc tcgtcgatac
     3781 cgaccaagcc gtcgtctggc gcgggccgat ggtcagccaa gccttgcagc aactgatgtt
     3841 tcaaagcgag tgggacgaag tggactacct gtttatcgac ctgccccccg gcacgggcga
     3901 catccaactc acgctgtccc agcgcatccc cgtaaccgga tcggtcatcg taaccacgcc
     3961 gcaggacatc gccctgatag acgcgcgcaa agccgtggat atgttccgca aagtcaacat
     4021 tcccattttg ggcgtattgg aaaatatgtc cgtccacatc tgcaccaact gcggacacag
     4081 cgaagcactg ttcggcacgg acggcggcaa agatttggcg gcccgcctca acgtccccct
     4141 gctcggacag cttcccctaa gcctgcccgt gcgcgaagcc atggacggcg gcacaccggc
     4201 gcaactgttc gacgaacacc ccgccatcgc ccgaatctac accgatgccg cattccaaat
     4261 cgccctgggc attgccgaca aaggcaaaga cttcagcagc cgcttcccca aaatcgtcgt
     4321 cgaataaagc cgcgtccgaa accgcaacag caatgccgtc ccaagccccg cgcctgccgg
     4381 cgggcttcat agtcctctct ccccgtggga gagggctgga gagagggcaa caagccgcaa
     4441 ggcttgtatt ggggcggtta agctgttggg aaagattgcc gcaacttgga gaatgccctc
     4501 tccccggccc tcccccacag gggagggagc ggattgcggc aggttttgcg gttgcaggcg
     4561 gtttgaaaaa cagattggat ttacaaccgt tgatgcaggt cgtctgaaaa gcaaaaagca
     4621 gcctgcacaa cctgattagt ttacaaaacc cttaacccca acagcctccc cgtcctctct
     4681 ccccgtggga gagggctgga gagagggcaa caagccgaaa ggcttgtatt ggggcggttg
     4741 agttgttggg aaaggttgcc gcaacttgga aaatgccgcc tccccggccc tcccccacgg
     4801 gggagggagt gggtttcggc agatttttcg gttgcaggcg atttgaaagg caacttagat
     4861 ttgcagctgt tgtttcaggt cgtctgaaaa ataaaaagca gcctgcacaa cctgttttcc
     4921 ttgcagcaaa cctcaacccc aacagccgac ccgtcctctc tccctgtggg agagagctag
     4981 agagag
//
LOCUS       DAWITQ010000147         4947 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.147, whole genome shotgun sequence.
ACCESSION   DAWITQ010000147 DAWITQ010000000
VERSION     DAWITQ010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4947)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4947)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4947
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.147"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            102..1007
                     /gene="glyQ"
                     /locus_tag="WIX18_001789"
     CDS             102..1007
                     /gene="glyQ"
                     /locus_tag="WIX18_001789"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEZ5238854.1"
                     /translation="MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRAL
                     GPEPWFAAYVQPSRRPKDGRYGDNPNRLQHYYQFQVALKPAPANIQDLYLDSLRELGI
                     DPKVHDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCTPVLGEITY
                     GIERLAMYLQGVENVYDLVWAKTLDGNTVTYGDVYHQNEVEQSTYNFEYSDADWLLRQ
                     FNDYEAQAKRLLAEENAALALPAYELVLKAGHTFNLLDARGAISVTERATYIGRIRAL
                     SRAVAQKYVESREKLGFPLMKANAA"
     gene            1084..1494
                     /locus_tag="WIX18_001790"
     CDS             1084..1494
                     /locus_tag="WIX18_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggL family protein"
                     /protein_id="HEZ5238855.1"
                     /translation="MPVYFRTPSRKRLHKMNRRQHKKLHLGEFQTLIFGVQGSLHQAE
                     DDAEAFDRFMDELIAYLAANGLEMAGGGDCGDFSCLFQKSGSRGLGETEKKAIISWLA
                     GREDVATLHATPLVDGFYGDDGWENYSETYKQAD"
     gene            1515..3578
                     /locus_tag="WIX18_001791"
     CDS             1515..3578
                     /locus_tag="WIX18_001791"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HEZ5238856.1"
                     /translation="MMTQTLLIELLTEELPPKALNNLGNHFAAAVAEGLEKAQLVDGA
                     AEFTAYASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK
                     IEDLTIVHDGKQDVYAYEYVQTGKPLGELLEDIINQAVKKLPIPKVMRWGSSTFTFVR
                     PVHGLIVLHGGDIVNVSVLGLQSSNQTLGHRFLSNGEITIENADSYAEQMRGQGKVVA
                     SFAERKAAIQTALEGQARRLNATVAADEALLDEVTALVEYPVVLEAGFEEHFLAVPQE
                     CLILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTADPSHIIQGNERVLRARLSDAEFF
                     YKQDQKATLESRLPKLANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAAR
                     LAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDNLPNGKVA
                     TAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFD
                     SFPKGLLNEKTPSETADFMQARLAVLLQNDYPQDIVAAVLAKQPRRLDDVVAKLQAVA
                     AFKQLPEAAALAAANKRVQNLLKKADAELGAVNESLLQQDEEKALFAAAQGLQPKIAA
                     AVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI
                     ALLGE"
     gene            3595..3996
                     /locus_tag="WIX18_001792"
     CDS             3595..3996
                     /locus_tag="WIX18_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEZ5238857.1"
                     /translation="MPSEAFRRHRAYRENKLQPLVSVLICAYNAEKYFAQSLAAVVNQ
                     TWRNLEILIVDDGSTDGTLAIAKDFQKWDSRIKILAHDRLLNRKQQRRDSPANTFKHR
                     LIRALTKISREREKRRQRREQLIGKIIVPFQ"
     gene            4008..4940
                     /locus_tag="WIX18_001793"
     CDS             4008..4940
                     /locus_tag="WIX18_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HEZ5238858.1"
                     /translation="MDIVFAADDNYAAYLCVAAKSVEAAHPDTEIRFHVLDAGISEAN
                     RAAVAANLRGGGNIRFIDVNPEDFAGFPLNIRHISITTYARLKLGEYIADCDKVLYLD
                     IDVLVRDSLTPLWDTDLGDNWLGACIDLFVERQEGYKQKIGMADGEYYFNAGVLLINL
                     KKWRRHDIFKMSCEWVEQYKDVMQYQDQDILNGLFKGGVCYANSRFNFMPTNYAFMAN
                     RFASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTAWGAERFTELAGSLTTVPEE
                     WRGKLAVPHRMFSTKRMLQRWRRKLSARFLRKIY"
BASE COUNT         1260 a         1395 c         1289 g         1003 t
ORIGIN      
        1 atgtatgccg tgttttcaaa tcagtctgtc tttgagataa acctatccaa acagcaatgg
       61 aaacagtaaa ataaaccctt tattttatcg aatcataagc catgcttacc ttccaacaaa
      121 tcatcttcaa actgcaaaca ttctgggcag acaaaggctg caccgtcatc caacccttcg
      181 acatggaagt cggtgccggc acatcccatc ccgccacctg cctgcgcgca ctcggccccg
      241 agccttggtt tgccgcctac gtccaaccca gccgccgccc caaagacggc cgctacggcg
      301 acaaccccaa ccgcctgcaa cactattacc aattccaagt cgccctcaag cccgctcccg
      361 ccaatatcca agacctctat ctcgactctc tgcgcgaatt gggcatcgat cccaaagtcc
      421 acgacatccg ctttgtcgaa gacgactggg aaaaccccac cctcggcgcg tggggtttgg
      481 gctgggaagt ctggctcaac ggcatggaag taacccagtt tacctatttc caacaagtcg
      541 gcggcatcga ctgcaccccc gtactcggcg aaatcaccta cggcatcgaa cgcttggcga
      601 tgtacctgca aggcgtggaa aacgtctatg acctcgtttg ggcaaaaacg ctggacggta
      661 atacagtaac ttacggcgac gtgtaccacc aaaacgaagt cgaacaatcc acctacaact
      721 tcgaatacag cgatgccgac tggctgctgc gccagttcaa cgactacgaa gcgcaagcca
      781 aacgcctgct tgccgaagaa aacgccgccc tcgccctgcc tgcctacgag cttgtcctca
      841 aagcggggca tacgttcaac cttttagacg cacgcggcgc gatttccgta actgagcggg
      901 caacttatat tggacgtatt cgtgcattga gccgcgccgt ggcgcaaaaa tatgttgaaa
      961 gccgcgaaaa actgggcttc cctttaatga aggcaaacgc cgcctaaggg ggcgacgatt
     1021 ttttacgttc gggcggcacg ataaggcagc cgtccggaag ccattatatt ttttaggaaa
     1081 atcatgcctg tctatttccg caccccaagc aggaaacgcc tgcacaaaat gaaccgccgc
     1141 cagcataaaa agctgcattt gggcgagttt caaacattga ttttcggcgt tcaaggcagt
     1201 ttgcaccaag ctgaggacga tgccgaagcg ttcgaccgct ttatggacga gctgattgcg
     1261 tatcttgcgg caaacggctt ggaaatggcg ggcgggggcg attgcggcga tttttcgtgc
     1321 ctgtttcaaa aatccggctc ccgaggcttg ggcgaaaccg agaaaaaagc cattatctct
     1381 tggctggcag gtcgcgaaga tgtcgccact ttgcacgcca ccccgctggt tgacggtttt
     1441 tacggggatg acggctggga aaattacagc gaaacctata aacaggcaga ttaaccaaat
     1501 tcaaagaaag ccgaatgatg acccaaaccc ttttaatcga actccttacc gaagaactcc
     1561 cgcccaaagc tctgaataat ctgggcaacc attttgccgc cgccgttgcc gaaggcttgg
     1621 aaaaagcgca actggttgac ggtgcagccg aatttacggc ttatgcctcg ccgcgccgtt
     1681 tggcggttca agtcaaaaac gttaaagccg ttcaggccga ccaaaaaatc gtgaaaaaag
     1741 gccctgccgt ggcgaatgcc atgaaagacg gtgcgccgac caaggctttg gaaggtttcg
     1801 cacgcggtgc gggcgcgaaa atcgaagact tgaccatcgt ccacgacggc aaacaggatg
     1861 tgtacgccta cgaatacgtc caaaccggca aaccgctggg cgaacttttg gaagacatta
     1921 tcaatcaagc cgttaagaaa ctgccgattc cgaaagtgat gcgttggggc agcagcacgt
     1981 ttaccttcgt gcgccctgtt cacgggctga ttgtgctgca cggcggcgac atcgtaaacg
     2041 tcagcgtttt gggtctgcaa agcagcaatc aaaccttggg acaccgcttc ttgtccaacg
     2101 gcgaaatcac cattgaaaac gccgacagct acgccgaaca aatgcgcggg caaggcaaag
     2161 tcgtcgcttc gtttgccgag cgcaaagccg cgattcagac ggcattggaa gggcaggcgc
     2221 gccgtctgaa cgcgaccgtt gccgccgatg aagcattgct ggacgaagta accgcgctgg
     2281 tcgaataccc cgttgttttg gaagccggtt ttgaggaaca cttcctcgcc gtgcctcaag
     2341 aatgcttgat tttgacgatg cagcaaaacc aaaaatactt cccgctgctc gaccaaaacg
     2401 gcaagctgat gaaccgcttc ctgctggtct ccaacctgca aaccgcagac ccgtcgcaca
     2461 tcatccaagg caacgaacgc gttttgcgcg cgcgcctgtc tgatgccgag ttcttctaca
     2521 aacaagacca aaaggcgact ttggaaagcc gcctgcccaa gctggcaaac gtggtttatc
     2581 acaacaaaat cggttcgcaa gccgaacgca tcgaacgcct gcaaagcatt gccgcccaca
     2641 tcgctaaagc gttgggcgca gatgccgccg ccgccgaacg cgccgcgcgt ctggcaaaag
     2701 ccgacttggt aaccgaaatg gtcggcgagt tccctgaatt gcaaggcacc atgggcaaat
     2761 actatgcccg tttggacggc gaaaccgaag aaatcgccga agccatcgag caacactacc
     2821 aaccgcgttt cgccggcgac aatctgccga atggcaaagt tgccaccgcc gtggcactgg
     2881 cggacaaact agaaaccttg gtcggcattt ggggcattgg tctgattccg accggcgaca
     2941 aagaccccta cgccctgcgc cgcgccgcct tgggtatttt gcggatgctg atgcagtacg
     3001 gtttggacgt gaacgaactg attcagacgg cattcgacag cttccccaaa ggtttgctca
     3061 acgaaaaaac gccgtctgaa accgccgact ttatgcaggc gcgccttgcc gtgttgctgc
     3121 aaaacgatta tccgcaagac atcgttgccg ccgtattggc gaaacagccg cgccgtttgg
     3181 acgacgtagt ggcgaaactg caagccgttg ccgcgttcaa acaactgccc gaagccgccg
     3241 cgctcgccgc cgccaacaaa cgcgtgcaaa atctgctgaa aaaagccgat gccgagttgg
     3301 gcgcggttaa cgaaagcctg ctgcaacagg acgaagaaaa agccctcttt gccgccgcgc
     3361 aaggcttgca gccgaaaatc gccgccgccg tcgccgaagg caatttccaa accgccttgt
     3421 ccgaactggc ttccgtcaag ccgcaagtcg atgccttctt tgacggcgtg atggtgatgg
     3481 cggaagatgc cgccgtaaaa caaaaccgtt tgaacctgtt gaaccgtttg gcagagcaga
     3541 tgaacgcggt agccgacatc gcgcttttgg gcgagtaacc gttgtacagt ccaaatgccg
     3601 tctgaagcct tcagacggca tcgtgcctat cgggagaata aattgcagcc tttagtcagc
     3661 gtattgattt gcgcctacaa cgcagaaaaa tatttcgccc aatcattagc cgccgtcgtg
     3721 aatcagactt ggcgcaactt ggagattttg attgtcgatg acggctcgac agacggcaca
     3781 cttgccattg ccaaggattt tcaaaagtgg gacagccgta tcaaaatcct tgcacacgac
     3841 cgcctcctga accgcaaaca gcaaaggcgc gattcccccg ccaacacatt caaacaccgc
     3901 ctgatccgcg ccttgaccaa aatcagcagg gaaagggaaa aacgtcggca aaggcgcgaa
     3961 cagttaatcg gcaagatcat tgtgcctttc caataaaagg agaaaagatg gacatcgtat
     4021 ttgcggcaga cgacaactat gccgcctatc tttgcgttgc ggcaaaaagc gtggaagcgg
     4081 cccatcccga tacggaaatc aggttccacg tcctcgatgc cggcatcagt gaggcaaacc
     4141 gggcggcggt tgccgccaat ttgcgggggg ggggtaatat ccgctttata gacgtaaacc
     4201 ccgaagattt cgccggcttc cccttaaaca tcaggcacat ttccattacg acttatgccc
     4261 gcctgaaatt gggcgaatac attgccgatt gcgataaagt cctgtatctg gatatagacg
     4321 tattggtcag ggacagcctg acgcccttat gggataccga tttgggcgat aactggcttg
     4381 gcgcgtgcat tgatttgttt gtcgaaaggc aggaaggcta caaacaaaaa atcggtatgg
     4441 cggacggcga atattatttc aatgccggcg tattgctgat caacctgaaa aagtggcggc
     4501 ggcacgatat tttcaaaatg tcctgcgaat gggtggaaca atacaaggac gtgatgcaat
     4561 atcaggatca ggacattttg aacgggctgt ttaaaggcgg ggtgtgttat gcgaacagcc
     4621 gtttcaactt tatgccgacc aattatgcct ttatggcgaa caggtttgcg tcccgccata
     4681 ccgacccgct ttaccgcgac cgtaccaata cggtgatgcc cgtcgccgtc agccattatt
     4741 gcggcccggc aaagccgtgg cacagggact gcaccgcgtg gggtgcggaa cgtttcacag
     4801 agttggcggg cagcctgacg accgttcccg aagaatggcg cggcaaactt gccgtcccgc
     4861 accgtatgtt ttcgacaaag cgtatgcttc aaagatggcg cagaaagctg tctgccagat
     4921 tcttacgcaa gatttattga cggggca
//
LOCUS       DAWITQ010000148         4937 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.148, whole genome shotgun sequence.
ACCESSION   DAWITQ010000148 DAWITQ010000000
VERSION     DAWITQ010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4937)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4937)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4937
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.148"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..696
                     /locus_tag="WIX18_001794"
     CDS             <1..696
                     /locus_tag="WIX18_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="basic amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HEZ5238859.1"
                     /translation="VYRVASNAEFAPFESLDSKGNVEGFDVDLMNAMAKAGNFKIEFK
                     HQPWDSLFPALNNGDADVVMSGVTITDDRKQSMDFSDPYFEITQVVLVPKGKKISSSD
                     DLKNMNKVGVVTGYTGDFSVSKLLGNDNPKIARFENVPLIIKELENGGLDSVVSDSAV
                     IANYVKNNPTKGMDFVTLPDFTTEHYGIAVRKGDEATVKMLNDALEKVRESGEYDKIY
                     AKYFAKEDEQAAK"
     gene            1003..2526
                     /locus_tag="WIX18_001795"
     CDS             1003..2526
                     /locus_tag="WIX18_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HEZ5238860.1"
                     /translation="MTVIKQEDFIQSICDAFQFISYYHPKDYIDALYKAWQKEENPAA
                     KDAMTQILVNSRMCAENNRPICQDTGIATVFLKVGMDVQWDADMSVEEMVNEGVRRAY
                     TWEGNTLRASVLADPAGKRQNTKDNTPAVIHMSIVPGDKVEVTCAAKGGGSENKSKLA
                     MLNPSDNIVDWVLKTIPTMGAGWCPPGILGIGIGGTPEKAVLMAKESLMSHIDIQELQ
                     EKAASGAELSTTEALRLELFEKVNALGIGAQGLGGLTTVLDVKILDYPTHAASKPIAM
                     IPNCAATRHVEFELDGSGPVELTPPRVEDWPDLTYSPDNGKRVDVDKLTKEEVASWKT
                     GDVLLLNGKILTGRDAAHKRLVDMLNKGEELPVDFTNRLIYYVGPVDPVGDEVVGPAG
                     PTTATRMDKFTRQMLEQTGLLGMIGKSERGAAACEAIADNKAVYLMAVGGAAYLVAKA
                     IKSSKVLAFPELGMEAIYEFEVKDMPVTVAVDSKGESIHATAPPQWQAKIGIIPVKS"
     gene            2624..4036
                     /gene="trkA"
                     /locus_tag="WIX18_001796"
     CDS             2624..4036
                     /gene="trkA"
                     /locus_tag="WIX18_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HEZ5238861.1"
                     /translation="MKILILGNGQVGSTVAQNLAAIPNNDVTVIDIDEKALQETGSRL
                     DVQTVFGNGASPFTLERAGAEDADLLLALSRSDETNIVACKVAADLFNIPGRIARVRS
                     SEYLEYLSPKLENNENGSLSIFGITETISPEQLVTEQLAGLIDCPGALQVLRFADDRV
                     RMVIIQARRGGLLVGRSIADIAQDLPDGADCQICAVYRNNRLIVPAPQTVIIEGDEIL
                     FAAAAENIGAVIPELRPKETSTRRIMIAGGGNIGYRLAKQLEHAYNVKIIECRPRRAE
                     WIAENLDNTLVLQGSATDETLLDNEYIDEIDVFCALTNDDESNIMSALLAKNLGAKRV
                     IGIVNRSSYVDLLEGNKIDIVVSPHLITIGSILAHIRRGDIVAVHPIRRGTAEAIEVV
                     AHGDKKTSAIIGRRISGIKWPEGCHIAAVVRAETGETIMGHHTETVIQDGDHIIFFVS
                     RRRILNELEKLIQVKMGFFG"
     gene            complement(4550..4663)
                     /locus_tag="WIX18_001797"
                     /pseudo
     CDS             complement(4550..4663)
                     /locus_tag="WIX18_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705522.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            4804..4879
                     /locus_tag="WIX18_001798"
     tRNA            4804..4879
                     /locus_tag="WIX18_001798"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4838..4840,aa:Glu,seq:ttc)
BASE COUNT         1314 a         1484 c         1178 g          961 t
ORIGIN      
        1 gtgtaccgcg tggcttccaa cgccgagttt gccccctttg aatctttaga ctcgaaaggc
       61 aatgtcgaag gtttcgatgt ggatttgatg aacgcgatgg cgaaggcggg caattttaaa
      121 atcgaattca aacaccagcc gtgggacagc cttttccccg ccttgaacaa cggcgatgcg
      181 gacgttgtga tgtcgggcgt aaccattacc gacgaccgca aacagtctat ggacttcagc
      241 gacccgtatt ttgaaatcac ccaagtcgtc ctcgttccga aaggcaaaaa aatatcttct
      301 tccgacgatt tgaaaaacat gaacaaagtc ggcgtggtaa ccggctacac gggcgatttc
      361 tccgtatcca aactcttggg caacgacaat ccgaaaatcg cgcgctttga aaacgttccc
      421 ctgattatca aagaactgga aaacggcggc ttggattccg tggtcagcga cagcgcggtc
      481 atcgccaatt atgtgaaaaa caatccgacc aaagggatgg acttcgttac cctgcccgac
      541 ttcaccaccg aacactacgg catcgcggta cgcaaaggcg acgaagcaac cgtcaaaatg
      601 ctgaacgatg cgttggaaaa agtacgcgaa agcggcgaat acgacaagat ttacgccaaa
      661 tattttgcaa aagaagacga acaggccgca aaataagccc gcccgtccga acacaatgcc
      721 gtctgaagcc ctttcagacg gcattgttca tcaatcggcc tacaatgaac tgcctgctga
      781 tttctcccta ccgcaaagca acaggcaaag attacaaata tcaaaatccg agtaaaacag
      841 tattttatta aaacaaattg ataatcaaga gattagaatt atgtattgtc tttaccgtac
      901 aaacgctggc actatttcaa cctgataaaa aacagccttc aaaaaggttg cttaaaacag
      961 cagcagacac ttaccgccac aaccttgaaa aggaacacaa tcatgaccgt catcaaacag
     1021 gaagacttta tccaaagcat ttgcgatgcc ttccaattca tcagctacta ccatcccaaa
     1081 gactacatcg acgcgctcta taaagcgtgg cagaaagaag aaaaccccgc cgccaaagac
     1141 gcgatgacgc agattttggt caacagccgc atgtgtgccg aaaacaaccg ccccatctgc
     1201 caagataccg gtatcgcgac cgtcttcctc aaagtcggta tggatgtgca gtgggatgcg
     1261 gacatgagcg tcgaagaaat ggttaacgaa ggcgtgcgcc gcgcctacac ttgggaaggc
     1321 aatacgctgc gcgcttccgt tctcgccgac cccgccggca aacgccaaaa taccaaagac
     1381 aacacgcccg ccgtcatcca tatgagcatc gtgccgggcg acaaagtcga agtaacctgc
     1441 gcggcaaaag gcggcggttc tgaaaacaaa tccaaactcg ccatgctcaa tccttccgac
     1501 aacatcgtcg attgggtatt gaaaaccatc ccgacgatgg gcgcgggctg gtgtcctccc
     1561 ggcatcttgg gcatcggcat cggcggcacg cctgaaaaag ccgtgttgat ggcaaaagag
     1621 tccctgatga gccacatcga catccaagaa ttgcaggaaa aagccgcgtc cggcgcggaa
     1681 ttgtccacca ccgaagccct gcgcctcgaa ctctttgaaa aagtcaacgc gctgggcatc
     1741 ggcgcacaag gtttgggcgg tctgaccacc gtgttggacg tgaaaatcct cgattacccg
     1801 acccacgccg cctccaaacc gattgccatg attccgaact gcgccgccac ccgccacgtc
     1861 gaatttgaat tggacggctc aggccctgtc gaactcacgc cgccgcgcgt cgaagactgg
     1921 cccgatttga cttacagccc cgacaacggc aaacgcgtcg atgtcgacaa gctgaccaaa
     1981 gaagaagtgg caagctggaa aaccggcgac gtattgctgt tgaacggcaa aatcctcacc
     2041 ggccgcgatg ccgcacacaa acgcctcgtc gatatgctca acaaaggcga agaattgccc
     2101 gtcgatttca ccaaccgcct gatttactac gtcggccccg tcgatccggt cggcgatgaa
     2161 gtcgtcggtc cggcaggtcc gaccacagcc acccgcatgg acaaattcac ccgccaaatg
     2221 ctcgaacaaa ccggcctctt gggcatgatc ggcaaatccg aacgcggcgc ggcggcgtgc
     2281 gaagccatcg ccgacaacaa agccgtgtac ctgatggcgg tcggcggcgc ggcatacctc
     2341 gtggcaaaag ccatcaaatc ttccaaagtc ttggcgttcc ccgaattggg tatggaagcc
     2401 atttacgaat ttgaagtcaa agatatgccc gtaaccgtcg ccgtagacag caaaggcgaa
     2461 tccatccacg ccaccgcccc gccccaatgg caggcgaaaa tcggcatcat ccccgtcaaa
     2521 tcttgaggcg tcatgccgtc tgaacacaaa atctgctttc agacggcatt tccgcccccg
     2581 gttgcggtac aatccaccat ttcatcactc ggcgacccac accgtgaaaa tcctcatttt
     2641 aggcaacgga caggtaggtt ctaccgtcgc acaaaacctt gccgccatac ccaacaacga
     2701 cgtaaccgtt atcgacatcg acgaaaaagc attgcaggaa acaggcagcc gcctcgatgt
     2761 ccaaaccgtt ttcggcaacg gcgcatcccc cttcacatta gaacgcgccg gcgcggaaga
     2821 tgccgacttg ctgctcgcgc tctcccgcag cgacgaaacc aacatcgtcg cctgcaaagt
     2881 tgccgccgac ctgttcaaca tccccggccg catcgcgcgc gtccgttcca gcgaatacct
     2941 cgaatacctc agccccaagc tcgaaaacaa cgaaaacggc agcctttcca tattcggcat
     3001 aaccgaaacc atcagccccg aacagctcgt taccgaacag cttgccggcc tgatagactg
     3061 cccgggcgca ttgcaggttt tacgttttgc agacgaccgc gtgcggatgg tcatcataca
     3121 ggcgcggcgc ggcgggttgc ttgtcggacg cagcattgcc gacatcgccc aagatttgcc
     3181 cgacggggcc gactgccaaa tctgcgccgt ttaccgcaac aaccgcctca tcgtccccgc
     3241 gccgcaaacc gtcatcatcg aaggcgacga aatcctattt gccgccgccg ccgaaaacat
     3301 cggcgcggtc atacccgaat tgcgccccaa agaaaccagc acccgccgca tcatgattgc
     3361 cggcggcggc aacatcggct accgtctcgc caagcagctc gaacacgcat acaacgtcaa
     3421 aatcatcgaa tgccggccgc gccgtgccga atggatagcc gaaaacctcg acaacaccct
     3481 cgtcctgcaa ggttcggcaa ccgacgaaac cctgctcgac aacgaataca tcgacgaaat
     3541 cgacgtattc tgcgccctga ccaacgacga cgaaagcaac attatgtccg cccttttggc
     3601 gaaaaacctc ggcgcgaagc gcgttatcgg catcgtcaac cgctcaagct acgtcgattt
     3661 gctcgaaggc aacaaaatcg acatcgtcgt ctccccccac ctcatcacca tcggctcgat
     3721 actcgcccac atccggcgcg gcgacatcgt tgccgtccac cccatccggc gcggcacggc
     3781 ggaagccatc gaagtcgtcg cacacggcga caaaaaaact tccgccatca tcggcaggcg
     3841 catcagcggc atcaaatggc ccgaaggctg ccacattgcc gccgtcgtcc gcgccgaaac
     3901 cggcgaaacc attatgggac accataccga aaccgtcatc caagacggcg accacatcat
     3961 ctttttcgtc tcgcgccggc gcatcctgaa cgaactggaa aaactcatcc aggtcaaaat
     4021 gggctttttc ggataaaccg ccccattccg gacacattgc cgccaagcgg tatggaagcg
     4081 gaaataatgg taggtgggct tcagacggca tccgccctcc ccgtccttcc cgcgtaagcg
     4141 ggaatccaga ccttgggata gcggcaatat tcaaaggtta tctgaaaatt tagaggttct
     4201 agattcccgt ttccacggga aggacgaaga gttgcgggaa tctagaccat tggaaagcgg
     4261 caatattcaa aggttagctg aagctttaga ggttctagat tcccgtttcc acgggaatga
     4321 cgaaaggtgg cgggaatcca aaccattggg caacagcaat attcaaagat tatctgaaag
     4381 tttgaggttc tagattcccg ctttcgcggg aatgacgaaa agtggcggga atgacgaagt
     4441 ttcagacggc atcgcccgcc tgttttgata tggcggcacc cccccgacaa aaaaaacaat
     4501 ccggaacgca tctgaccgtt ccggcttgtt ttcaggcgaa tccgccgcat cagaacatac
     4561 tgcgcacgcc catattgacc tgccaagtct ggcgcatcgt gtgcatcgaa gacctttgcg
     4621 cctcaaaata aagctgcctt ccgttgtcgg cattaccacg caaaaaaaat gaattgcttg
     4681 atattccaat gttttttata tgtttttata ttgtgatgcg atcagacaaa cgcccccctg
     4741 acatttgttt agacggcatc gtattgctaa atttctataa gtatgtataa tgtccgtttc
     4801 cacgcgccca tcgtctagag gcctaggaca ctgccctttc acggcggcaa ccggggttcg
     4861 aatccccgtg ggcgtgccaa ttcaaaaacc tgcttgtttc aagcaggttt ttttattatg
     4921 aatcgtcatt cccgcac
//
LOCUS       DAWITQ010000149         4935 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.149, whole genome shotgun sequence.
ACCESSION   DAWITQ010000149 DAWITQ010000000
VERSION     DAWITQ010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4935)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4935)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4935
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.149"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(128..373)
                     /locus_tag="WIX18_001799"
     CDS             complement(128..373)
                     /locus_tag="WIX18_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238862.1"
                     /translation="MAGATIRIIDRQTDEVIAKKTIYVFEKGLDGTGGARMPWKFAIL
                     CNKERLTSSEPLSDFVLSVLKPYILRPLYIASLRRDD"
     gene            complement(662..1015)
                     /locus_tag="WIX18_001800"
     CDS             complement(662..1015)
                     /locus_tag="WIX18_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238863.1"
                     /translation="MFTTNDLRHFLEGLAILFSIGYWGTMLLLLWFLVRFAYKKPKRN
                     PGKILSGSLTAAAILMLFVWIIPKQFGPIKEEIQAQEEWDRKYKEAEAVFNEQCKTAG
                     ERFTRRRTMWKGLCC"
     gene            1251..2678
                     /locus_tag="WIX18_001801"
     CDS             1251..2678
                     /locus_tag="WIX18_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HEZ5238864.1"
                     /translation="MFFSALKSFLSRYITVWRNVWAVRDQLKPPKRTAEEQAFLPAHL
                     ELTDTPVSAAPKWAARFIMAFALLALLWSWFGKIDIVAAASGKTVSGGRSKTIQPLET
                     AVVKAVHVRDGQHVKQGETLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALES
                     RTVPHIDMAQARSLGLSDADVQSVQVLAQHQYQAWAAQDAQLQSALRGHQAELQSAKA
                     QEQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQ
                     AAIAQAEQNRVLNTQNLKRDTLDALRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGT
                     VQELATYTVGGVVQAAQKMMVIAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPY
                     TRYGYLTGKVKSVSHDAVSHEQLGLVYTAVVSLDKHTLNIDGKAVNLTAGMNVTAEIK
                     TGKRRVLDYLLSPLQTKLDESFRER"
     gene            2747..4150
                     /locus_tag="WIX18_001802"
     CDS             2747..4150
                     /locus_tag="WIX18_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEZ5238865.1"
                     /translation="MTLLNLMIMQDYGISVCLTLTPYLQHELFSAMKSYFSKYILPVS
                     LFTLPLSLSPSVSAFTLPEAWRAAQQHSADFQASHYQRDAVRARQQQAKAAFLPHVSA
                     NASYQRQPPSISSTRETQGWSVQVGQTLFDAAKFAQYRQSRFDTQAAEQRFDAAREEL
                     LLKVAESYFNVLLSRDTVAAHAAEKEAYAQQVRQAQALFNKGAATALDIHEAKAGYDN
                     ALAQEIAVLAEKQTYENQLNDYTDLDSKQIEAIDTANLLARYLPKLERYSLDEWQRIA
                     LSNNHEYRMQQLALQSSGQALRAAQNSRYPTVSAHVGYQNNLYTSSAQNNDYHYRGKG
                     MSVGVQLNLPLYTGGELSGKIHEAEAQYGAAEAQLTATERHIKLAVRQAYTESGAARY
                     QIMAQERVLESSRLKLKSTETGQQYGIRNRLEVIRARQEVAQAEQKLAQARYKFMLAY
                     LRLVKESGLGLETVFAE"
     gene            complement(4314..4889)
                     /locus_tag="WIX18_001803"
     CDS             complement(4314..4889)
                     /locus_tag="WIX18_001803"
                     /inference="COORDINATES: protein motif:HMM:NF024751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HEZ5238866.1"
                     /translation="MLCTQTDGDNAQKKTTTYKEQDPAKVTHYLTQPAEFSDYQRVYL
                     DETGFDRHLFRPYARSLKGQIVKAQISGKRYRRLSLVSAQVGNRLIAPMVYQNTMTGV
                     FFEAWFQQCLLPALTQKSVIILDNARFHRMGVLREMAEKLGHKVLPLAPYSPELNPIE
                     KVWANIKRYLRTVLSDYARFDDALLSYFDFN"
BASE COUNT         1257 a         1202 c         1281 g         1195 t
ORIGIN      
        1 cggcgcgtcc gtcatcacgc cggcaaccgc ctttgtcatc ccttgcttat cttccatggt
       61 gcgaatcctc aaaaacgggc aaaaaaaagc cctgttactt gtagaaagta aaggacgtta
      121 atttttgtta atcgtccctt cttagggacg caatatataa gggacgcaat atataaggtt
      181 ttaaaacgct aagaacaaaa tccgataacg gctctgaaga agtaagtctt tctttattgc
      241 acaagatagc aaacttccac ggcattctcg ccccacccgt gccgtccaag cctttttcaa
      301 agacatagat ggttttcttg gcaatcactt cgtcagtttg gcggtcgata atccgtatgg
      361 tcgcacctgc cacccagtgc ctgcgcagct tggaatcgac attgttttcg aacgttaccg
      421 cataacgggc ggggtgtata tgattaagta tttgatttag cggaaaaatc tttacctgaa
      481 taccgaataa tatcggaatg gttgggttgc aggacatcca catagcggta ttccccatcg
      541 ctaaaaaatc ctaggaaacg agcaataaaa tttacgcctt cgctggtctg taaagccgca
      601 ttgtcccaca tcgggtctct ggtttttgca tctgccgaaa cggtacgctc aggtactacc
      661 ttcaacagca taatcccttc cacattgtcc gccgtctggt aaatctttcc cccgccgttt
      721 tgcattgttc gttaaacacg gcttcggctt ctttgtattt tctgtcccac tcttcttgtg
      781 cctgtatttc ttctttgatc gggccgaatt gtttgggaat aatccaaaca aacagcatca
      841 ggatagcggc ggcggtcagg ctgcctgaaa ggattttgcc ggggttccgt ttgggctttt
      901 tataggcaaa gcggacgaga aaccaaagca acagcagcat ggtgccccaa tagccgattg
      961 agaataggat ggccaaacct tctaggaaat ggcgtaaatc gtttgtggta aacatgggtt
     1021 gttcctgtgg ttaaatgtgc aggctgcttt ttgccgaacc ttgccgcatc tcaaaagcag
     1081 cctgcgcttc agcgttgcgt tacgcagtaa aataatgaat atttgtaacg acttgggtat
     1141 tttttgtcaa tattcccgcc tttcccttaa cagctgccgc gctttccgtt aaaattcctt
     1201 tacatattta tattgtttcc tgtttctata ttgccaaggt tatacccgtt atgtttttct
     1261 ccgccctgaa atcctttctt tctcgataca ttactgtatg gcgcaatgtt tgggcggtgc
     1321 gcgaccagtt gaaaccgccc aaacgcacgg cggaagaaca ggcgtttttg cccgcgcatt
     1381 tggaactgac cgatacgccg gtctctgccg ctccgaaatg ggcggcgcgt tttattatgg
     1441 cgtttgcgct tttggctttg ttgtggtcct ggttcggcaa aatcgatatt gtggcggcgg
     1501 cttcgggcaa aacggtgtcg ggcgggcgca gcaaaaccat ccagccgctg gaaacggcgg
     1561 tggttaaggc ggtacatgtg cgcgacgggc agcatgtgaa acagggagaa acgctggcgg
     1621 aactggaggc tgtgggaaca gacagcgatg tggtgcagtc ggagcaggct ttgcaggctg
     1681 cccaattgtc caaactgcgt tatgaagcgg tattggcggc attggaaagc cgtaccgtgc
     1741 cgcatatcga tatggcgcaa gcacggtctt taggtctctc cgatgccgat gtgcaatcgg
     1801 tgcaggtgtt ggcgcagcac cagtatcagg catgggcggc gcaggatgcg caattgcagt
     1861 cggctttgcg cggccatcag gcggaattgc agtcggccaa ggcgcaggag cagaagctgg
     1921 tttcggtggg ggcgatcgag cagcagaaaa cagcagacta ccgccgtttg cgggccgaca
     1981 attttatttc ggaacatgcg tttttggagc agcagagcaa atcggtcagc aattggaacg
     2041 atttggaaag tacgcgcggt cagatgaggc agattcaggc ggccattgca caggcggagc
     2101 agaatcgggt gctgaatacg cagaacctga aacgcgatac gctggatgcg ctgcgccagg
     2161 caaacgaaca gattgaccaa taccgcggcc aaacggataa ggcaaagcag cggcagcagc
     2221 tgatgacaat acagtcgcct gcggacggca cggtgcagga attggctacc tatacggtgg
     2281 gcggtgtggt gcaggctgcc caaaaaatga tggtgattgc gcccgatgac gacaaaatgg
     2341 acgtggaagt tttggtattg aacaaagaca tcggttttgt ggaacaggga caggatgcgg
     2401 tggtgaagat tgagagcttt ccctatacgc gctacggtta tctgacgggc aaggtgaaaa
     2461 gtgtcagcca tgatgcggta agccacgaac agttgggctt ggtttatacg gcggtggtgt
     2521 cgctggacaa acataccttg aatattgacg gcaaagcagt gaatctgacg gcgggcatga
     2581 atgtcacggc ggagattaaa acgggtaaac ggcgggtgct ggattatctg ttaagcccgc
     2641 tgcaaaccaa attggacgaa agctttaggg agcgataggc ggatccgtac tgggcatttg
     2701 ttatccgccg gttcggacat gcagactgcc tgaaaccatt gcccggatga cattgctcaa
     2761 tctaatgata atgcaagatt acggtatttc cgtttgcctg acactgacgc cctatttgca
     2821 acatgaacta ttttcggcta tgaaatccta tttttccaaa tatatcctac ccgtttcact
     2881 ttttaccttg ccactatccc tttccccatc cgtttcggct tttacgctgc ctgaagcatg
     2941 gcgggcggcg cagcaacatt cggctgattt tcaagcgtcc cattaccagc gtgatgcagt
     3001 gcgcgcacgg caacaacaag ccaaggccgc attccttccc catgtatccg ccaatgccag
     3061 ctaccagcgc cagccgccat cgatttcttc cacccgcgaa acacagggat ggagcgtgca
     3121 ggtgggacaa accttatttg acgctgccaa atttgcacaa taccgccaaa gcaggttcga
     3181 tacgcaggct gcagaacagc gtttcgatgc ggcacgcgaa gaattgctgt tgaaagttgc
     3241 cgaaagttat ttcaacgttt tactcagccg agacaccgtt gccgcccatg cggcggaaaa
     3301 agaggcttat gcccagcagg taaggcaggc gcaggcttta ttcaataaag gtgctgccac
     3361 cgcgctggat attcacgaag ccaaagccgg ttacgacaat gccctggccc aagaaatcgc
     3421 cgtattggct gagaaacaaa cctatgaaaa ccagttgaac gactacaccg acctggatag
     3481 caaacaaatc gaggccatag ataccgccaa cctgttggca cgctatctgc ccaagctgga
     3541 acgttacagt ctggatgaat ggcagcgcat tgccttatcc aacaatcatg aataccggat
     3601 gcagcagctt gccctgcaaa gcagcggaca ggcgcttcgg gcagcacaga acagccgcta
     3661 tcccaccgtt tctgcccatg tcggctatca gaataacctc tacacttcat ctgcgcagaa
     3721 taatgactac cactatcggg gcaaagggat gagcgtcggc gtacagttga atttgccgct
     3781 ttataccggc ggagaattgt cgggcaaaat ccatgaagcc gaagcgcaat acggggccgc
     3841 cgaagcacag ctgaccgcaa ccgagcggca catcaaactc gccgtacgcc aggcttatac
     3901 cgaaagcggt gcggcgcgtt accaaatcat ggcgcaagaa cgggttttgg aaagcagccg
     3961 tttgaaactg aaatcgaccg aaaccggcca acaatacggc atccgcaacc ggctggaagt
     4021 aatacgggcg cggcaggaag tcgcccaagc agaacagaaa ctggctcaag cacggtataa
     4081 attcatgctg gcttatttgc gcttggtgaa agagagcggg ttagggttgg aaacggtatt
     4141 tgcggaataa agcaggctga aacggttatg aaattcccaa agcagcctgc accccgtttc
     4201 gaaagtgcag gctgctttgg gattgatccg atactttcac attctcattg cctttaaata
     4261 aagcacagtt aaaaacacat ttaaattaag tgcgaattaa ttcaaatgta tattcaatta
     4321 aaatcaaaat aggacagtag tgcatcgtca aatcgggcgt aatcagacaa aacggttcgc
     4381 agataccgct taatattcgc ccacactttc tcaatcgggt tgagctcagg tgaataaggt
     4441 gcaagaggca ataccttatg tcccaatttt tccgccattt cccgtaagac acccatacgg
     4501 tgaaatcgcg cattatctaa aataatcacc gatttttgag tcaatgcggg cagtaggcat
     4561 tgctgaaacc acgcttcaaa aaagactccg gtcatcgtat tttgataaac catcggagca
     4621 atcagccggt tgccgacttg tgcggacacc agagataagc gtcggtatct ttttccactt
     4681 atctgcgctt tcactatttg ccctttcagg ctgcgggcat agggacggaa caggtggcgg
     4741 tcaaatcctg tttcatccaa ataaacgcgt tggtagtcag aaaattcggc cggctgtgtc
     4801 aaataatgcg ttactttggc cgggtcttgt tctttgtaag tggtggtctt tttttgcgcg
     4861 ttatccccat ctgtttgagt gcatagcaaa cggtggctgc cgtacaatca aaatgtttgg
     4921 cgatttcatg cagat
//
LOCUS       DAWITQ010000150         4920 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.150, whole genome shotgun sequence.
ACCESSION   DAWITQ010000150 DAWITQ010000000
VERSION     DAWITQ010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4920
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.150"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..213)
                     /locus_tag="WIX18_001804"
     CDS             complement(<1..213)
                     /locus_tag="WIX18_001804"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238867.1"
                     /translation="MPSEDEGSTFCPVPARLPFYAAPPFADNIAHFFISTDFPLSVKI
                     LSHLSTTGYTQVQDKACGDWGFSAAGK"
     gene            complement(225..1556)
                     /gene="pmbA"
                     /locus_tag="WIX18_001805"
     CDS             complement(225..1556)
                     /gene="pmbA"
                     /locus_tag="WIX18_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HEZ5238868.1"
                     /translation="MLFNHTASELLDLCRRTLDLAKAAGATAAEADFSESLGQSVSVR
                     LGEIEQIEFQQDKSLDITVYVGKRKGRASTADFSEKALQDTVKAAIDIARYTAEDDCA
                     GLADASLMAQHIGDPDLYHEWDLDTEAAVELAKQCEQAALNEDERIENSEGAAVQTGH
                     YQYVYGNTHGFAAHQQGTRHSISCSVVAADENGMQRDYWYDSSCRHQDMDSPTQIGQT
                     AAERTLRRLNSRSIPTGSYPVLFDATVSGGLIGHLVGALSGGSLYRQSSFLIDSIGKQ
                     VLPDFLSLREEPHIPRAFGSTYFDSEGVATRPRFVIRDGIVEGYFLSSYSARKLGMQT
                     TGNAGGAHNLYLNHTHETQSDLLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVEN
                     GVIAYPVHEITVAGRLQDMYRDIVGVADDALRRSSNKIGSILIAGMTVAGS"
     gene            1705..2217
                     /locus_tag="WIX18_001806"
     CDS             1705..2217
                     /locus_tag="WIX18_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein"
                     /protein_id="HEZ5238869.1"
                     /translation="MKMFEQEDEWVSKTQMKKQMNGLQDLGMELTKLSSDTLKKIGLD
                     EDLYEAVVTYKKITSNGALKRQAQFIGRLMRDTDPAPIEAFLAKLRGDDAVHNAFLQR
                     VEQARVRLLADDGALTQFMSDFPHADAGKLRTLVRNTKKEQEQNKPPKNFRALFQELK
                     TVMENGDAEI"
     gene            2264..2983
                     /locus_tag="WIX18_001807"
     CDS             2264..2983
                     /locus_tag="WIX18_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238870.1"
                     /translation="MLFRKTTAAVLAAALMLNGCTAMMWGMNDPFSQTTAYKHVDKDQ
                     IRAFGVVAKDNAQLEKGSLVMMGGKYWFVVNPEDSAKLTGILKAGLDKPFQIVEDTPS
                     YARHQALPVKLESPGSQNFSTEGLCLRYDTDKPADIAKLKQLGFEAVKLDNRTIYTRC
                     VSAKGKYYATPQKLNADYHFEQSVPADIYYTVTEKHTDKSKLFANILYTPPPFLILDA
                     AGAVLALPVAALIAATNSSDK"
     gene            3052..4752
                     /gene="recJ"
                     /locus_tag="WIX18_001808"
     CDS             3052..4752
                     /gene="recJ"
                     /locus_tag="WIX18_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HEZ5238871.1"
                     /translation="MSVKIQTRSVNTDVFNHLLTAGADPLIARLCASRGVQSPAELDD
                     KLASLLPYQTLTNCEAAARRLADAVERQEKILIVADYDADGATACAVGLDGLAAMGAK
                     VDFLVPNRFEHGYGLTPELAEIAAAQGVDLLITVDNGIASIAGVARAQELGLDVIVTD
                     HHLPAETVPDCIIVNPNQKGCGFQSKSLAGVGVIFYVLMALRAELRRRNYFSDGLKEP
                     NLGDLLDLVALGTVADVVSLDHNNRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKA
                     QPFDMGFALGPRINAAGRLDDMSVGIACLLARDDSEAQELAAQLNNLNIERREIEQSM
                     LQDALNAFPETLPSGQMTLVAYRDDFHQGVVGIVASRLKDRFYRPTIVFAPADNGEVR
                     GSGRSIPNLHLRDALDLVSKRHPDLILKFGGHAMAAGLSILEHNIPAFQTTFEEAVRE
                     MVCEDDLSQTFITDGSLPACDITLEQAQNLARHVWGQGFAPPSFTDEFHVVRQQPLGA
                     EGKHKKAWLQKDGCEFEAMFWRCSEDIPEYIRTVYRPVANEWRNNLELQLYIDYWEAA
                     "
BASE COUNT         1098 a         1317 c         1412 g         1093 t
ORIGIN      
        1 tttgccggcg gcggaaaaac cccaatcccc gcacgcctta tcctgaactt gtgtgtaccc
       61 tgttgtggac aagtggctta gtattttgac ggataaggga aaatcagtgc tgatgaaaaa
      121 atgtgcaatg ttgtcggcaa aaggcggtgc ggcataaaac ggcaaacggg caggcacggg
      181 gcaaaacgtg ctgccttcgt cttcagacgg catcggcagg gcgttcagct tccggcaacc
      241 gtcatccccg caatcagaat cgagccgatt ttgttggacg aacgccgcaa agcgtcatcc
      301 gccacgccga caatgtcgcg gtacatatcc tgcaagcgtc cggctacggt aatctcgtgg
      361 acggggtagg caatcacgcc gttttccacc caaaaacccg ccgcgccgcg cgagtagtca
      421 ccggtaatgg tgttcgcgcc ctgtcccatc agttcggtaa ccaataatcc cgtccccatt
      481 tctttcagca ggtcggattg cgtttcgtgc gtatggttca aatacaggtt gtgcgcgccg
      541 ccggcgttgc ccgtggtctg cataccgagt ttgcgcgcgc tgtaactgct gaggaaatag
      601 ccttcgacga tgccgtcgcg gataacgaaa cgcggccgcg tggcgacgcc ttcggaatcg
      661 aaataggtgc tgccgaaggc gcggggaata tgcggctctt cgcgcaggct gaggaaatcg
      721 ggcagaacct gtttgcctat gctgtcgatc aggaagctgc tttggcggta gagcgagccg
      781 ccggacagtg cgccgacgag gtgtccgatc agacctcccg aaacggtcgc atcgaatagg
      841 acggggtagc ttccggtcgg aatgctgcgg ctgttcagac gacgtaaggt acgttcggcg
      901 gcggtttgac cgatttgcgt cgggctgtcc atgtcttgat ggcggcagga ggaatcgtac
      961 cagtagtcgc gctgcatgcc gttttcgtcg gcggcaacga cgctgcatga aatgctgtgg
     1021 cgtgtgcctt gctggtgtgc ggcaaaaccg tgggtgttgc cgtaaacgta ttggtaatgt
     1081 ccggtttgca ccgccgcccc ttcggagttt tcgatgcgct catcctcgtt cagggcggct
     1141 tgttcgcatt gttttgccaa ctcgacggcg gcttccgtat ccaaatccca ttcgtggtaa
     1201 aggtcggggt cgccgatgtg ttgcgccata agcgaagcgt ctgccaaacc tgcgcaatcg
     1261 tcttcggcgg tgtagcgggc gatgtcgatg gcggctttga cggtgtcttg cagggctttt
     1321 tcggagaagt cggcagtgct ggcgcggcct ttgcgtttgc cgacgtaaac ggtaatgtcc
     1381 agcgacttgt cctgctggaa ctcgatttgt tcgatttcgc ccagccgcac gctgacgctt
     1441 tgtcccaatg attcgctgaa atcggcttcg gcggcggtcg cgcccgctgc ttttgccaag
     1501 tcgagcgtgc ggcggcagag gtcgagaagt tcggaagcgg tgtggttgaa cagcatagaa
     1561 atctttcttg gtggagcgtt gcggcatttt aaccgtttcg ggcggcaggg gcaaaagcgt
     1621 gccgtttgca gggcggacgg tgcaaaatgc cgtctgaacg cggaatcatt ctgttaaaat
     1681 gcgcccgtcg gataaaattt gagaatgaag atgtttgaac aagaagacga atgggtcagc
     1741 aaaacccaaa tgaaaaagca gatgaacggt ttgcaggatt tgggtatgga gctgaccaag
     1801 ctctcaagcg acacgttgaa aaaaatcggc ttggacgaag atttgtacga agccgtcgtt
     1861 acctataaaa aaatcacatc caacggcgcg ctcaagcggc aggcgcaatt tatcggcaga
     1921 ctgatgcgcg ataccgatcc cgcgcccatc gaggcatttc ttgccaagct gcgcggcgac
     1981 gatgcggtgc acaatgcctt tttgcaacgc gtggaacagg cgcgcgtacg gctgttggca
     2041 gacgacggcg cgttgacgca gtttatgtcg gattttccgc atgcggacgc gggcaagctg
     2101 aggacgctcg tccgcaacac caaaaaagag caggagcaaa acaaaccgcc gaaaaacttc
     2161 cgcgcgctgt ttcaagaatt gaaaaccgtg atggaaaacg gggacgcgga aatttaggca
     2221 tattttcaga cgacatccgc cgttatttag attggaggat aaaatgttgt tccgtaaaac
     2281 gaccgccgcc gttttggcgg cagccttgat gttgaatggc tgtacggcaa tgatgtgggg
     2341 catgaacgac ccgttcagcc aaacgaccgc ctataaacac gttgacaagg atcaaatccg
     2401 cgccttcggt gtggttgcca aagacaatgc ccaattggaa aagggcagtc tggtgatgat
     2461 gggcgggaaa tactggttcg tcgtcaatcc cgaagattcg gcgaagctga cgggcatttt
     2521 gaaggcaggg ctggacaaac ccttccaaat agttgaggat accccgagct atgctcgcca
     2581 ccaagccctg ccggtcaaac tcgaatcgcc tggcagccag aatttcagta ccgaaggcct
     2641 ttgcctgcgc tacgataccg acaagcctgc cgacatcgcc aagctgaaac agctcgggtt
     2701 tgaagcggtc aaactcgaca atcgaaccat ttacacgcgc tgcgtatccg ccaaaggcaa
     2761 atactacgcc acaccgcaaa aactgaacgc cgattaccat tttgaacaga gtgtgcctgc
     2821 cgatatttat tacacggtta ctgaaaaaca taccgacaaa tccaagctgt ttgcaaatat
     2881 cttatatacg ccccctccct ttttgatact ggatgcggcg ggcgcggtac tggccttgcc
     2941 tgtcgcggcg ttgattgcag ccacgaattc ctcagacaaa tgaacggcaa tgccgtctga
     3001 aaagccttca gacggcattt caaacacatc cgcactgtaa agttccacgc tatgtccgtc
     3061 aaaatccaaa cccgatccgt caataccgac gttttcaatc atttgctcac cgccggcgcc
     3121 gatcctttaa tcgcccggct ttgtgcctcg cgcggtgtgc aaagtcctgc cgaattggac
     3181 gacaaactcg cttccctcct gccttatcaa acgctgacga attgcgaagc cgccgcccgc
     3241 cgtttggcgg atgcggttga gcgtcaggaa aaaatcttga ttgtcgccga ctacgatgcc
     3301 gacggcgcga ccgcgtgtgc cgtcggtttg gacggtttgg cggcgatggg ggcaaaagta
     3361 gatttcctcg tgcccaaccg ctttgaacac ggctacggtt taacgcccga gctggccgaa
     3421 atcgccgccg cgcaaggcgt ggatttgctg attacggtcg ataacggcat tgccagcatc
     3481 gcaggcgtgg cgcgtgcgca ggaattgggt ttggatgtga ttgtaaccga ccaccatctg
     3541 cctgccgaga ccgtgccaga ctgcatcatc gtcaatccga accaaaaagg ctgcggtttc
     3601 caaagcaaaa gcttggcggg cgtgggcgtg attttttatg tactgatggc tttgcgtgcc
     3661 gaactgcgcc gccgcaatta tttttcagac ggcctaaaag agccgaatct gggcgacctt
     3721 ttggatttgg tcgcactcgg taccgttgcc gacgtcgtct ccctcgatca caacaaccgt
     3781 atcctcgtgt cgcaaggttt gaaacggatg cgttcgggca aaatgcgccc cggtatccgc
     3841 gccttgtttg aagtggcgcg gcgcgactgg cgcaaagcgc agccgtttga tatgggcttt
     3901 gcgttggggc cgcgcatcaa tgccgccgga cggctagacg atatgtcggt cggcatcgcc
     3961 tgcctgttgg cgcgagatga ttccgaagct caggaactgg cggctcagtt aaacaacctc
     4021 aatatcgagc gtcgcgaaat cgagcagtct atgctgcaag acgcgctgaa tgcttttcct
     4081 gaaaccctgc cttcaggtca gatgactttg gtggcgtatc gcgacgactt ccatcaaggc
     4141 gtggtcggca tcgttgccag ccgcctcaaa gaccgttttt atcgtccgac catcgtgttt
     4201 gcgcctgccg acaacggcga agtacgcggt tcgggacgtt ccattcccaa tttgcacctg
     4261 cgcgatgctt tggacttggt gtccaaacgc catcccgatt tgattttgaa attcggcgga
     4321 cacgcgatgg cggcgggttt gagcatactt gaacacaaca ttcccgcgtt tcagacgacc
     4381 tttgaagaag ccgtgcgcga aatggtgtgc gaagacgatt tgtcgcaaac cttcatcacc
     4441 gacggcagcc tgcccgcctg cgacatcacg ttggaacagg cgcaaaacct tgcccgtcac
     4501 gtttgggggc agggcttcgc gccgccgagc tttaccgacg agttccacgt cgtccgccag
     4561 cagcctttgg gcgcggaagg caaacacaaa aaagcgtggc tgcaaaaaga cggctgcgaa
     4621 tttgaagcaa tgttctggcg gtgcagcgaa gacattcccg aatacatccg cacggtgtac
     4681 cgccccgttg ccaacgaatg gcgcaacaac ctcgaattgc agctttatat cgactactgg
     4741 gaagcggcgt agaggcggcg gaacgccgtt tgaatgtgat ttctgttcct tcatttgcct
     4801 gtttgtacga cgggaatgtt cccaatcgga aaagaaagta aagggcgtta atttttgtta
     4861 atcatccctt cttagggacg caatatataa ggtgcatcaa atttcagact ccggcggatt
//
LOCUS       DAWITQ010000151         4876 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.151, whole genome shotgun sequence.
ACCESSION   DAWITQ010000151 DAWITQ010000000
VERSION     DAWITQ010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4876)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4876)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4876
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.151"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(92..574)
                     /locus_tag="WIX18_001809"
     CDS             complement(92..574)
                     /locus_tag="WIX18_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEZ5238872.1"
                     /translation="MTQQRQLPSHELIMSELMMPDTANFSGNVHGGELLLLLDQVAYS
                     CASRYSGNYCVTLSVDKVLFKEPIHIGDLVTFYAAVNYTGRTSMEIGIRVEAQNIRTG
                     EIRHTNSCYFTMVAVKDGKPVPVPPLEILTDRQRCRYEKAKKRRDISLQASEDMSCGC
                     "
     gene            complement(727..888)
                     /locus_tag="WIX18_001810"
     CDS             complement(727..888)
                     /locus_tag="WIX18_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238873.1"
                     /translation="MSGQPEKHHTSPIEDERKNPVYRMGRAVAGFMLVVWVAVLALVF
                     FLVFRFWLS"
     gene            complement(962..1423)
                     /gene="recX"
                     /locus_tag="WIX18_001811"
     CDS             complement(962..1423)
                     /gene="recX"
                     /locus_tag="WIX18_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HEZ5238874.1"
                     /translation="MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLN
                     EFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQQGIDEETSRNLLPDRSSEKQTA
                     IDVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC"
     gene            complement(1498..2208)
                     /locus_tag="WIX18_001812"
     CDS             complement(1498..2208)
                     /locus_tag="WIX18_001812"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HEZ5238875.1"
                     /translation="MNAAIEHVQAVAFDLDGTLCDSVPDLAAAAEAMLEQLGMKPLPA
                     KVVESYVGDGIGKLVHRVLTNDRDREADSELWEKGFVSYMKYYRDHLSVFTRPYPETE
                     AGLALLKSLGIPLAVITNKNEILAVELLKQLGLADYFSLILGGDSLPEKKPSPLPLRH
                     AAEVLGIDVANMVMVGDSRNDIIAAKAAGCLSVGVTFGYGDMTLLSQDDATRPDWIIG
                     SLPEIYENLQPQKNKDEE"
     gene            2615..3880
                     /locus_tag="WIX18_001813"
     CDS             2615..3880
                     /locus_tag="WIX18_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003420866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HEZ5238876.1"
                     /translation="MSEALAKETLNPFEIARKQVKTACDRLKTDPAVYEILKSPTRVL
                     EVNFPVKLDDGTVKTFTGYRSQHNNAVGPYKGGVRFHPGVNLDEVKALSIWMTIKCCV
                     AGIPYGGGKGGVTLDPRDYSEAELERIARAYSEAISPLIGEKIDIPAPDVNTNGKIMS
                     WMVDAYENVVKHSAPGVFTGKPVEFGGSLARTEATGYGVNLAAVQALEKLGKDVKGAT
                     YAIQGFGNVGYHTGYYAHQSGAKVVAVSTVDVAIYNENGLDMEALFKEFQEKGFITNE
                     ASYGKEITNAELLALDVDVLAPCALENQLTSENAGKVRAKIVVEGANGPTTPEADVIL
                     RQNGVLVVPDILANCGGVVVSYFEWVQNLQGYYWEFDEVQEKETVVLRRAFRDIWNLA
                     QEYDVDLRTASYMMSIRRVEKAMKLRGWY"
     gene            complement(3937..4743)
                     /locus_tag="WIX18_001814"
     CDS             complement(3937..4743)
                     /locus_tag="WIX18_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4198 domain-containing protein"
                     /protein_id="HEZ5238877.1"
                     /translation="MKKTLTLLAVSALFATSAHAHRVWVETAHTHGGEYLKADLGYGE
                     FPELEPIAKDRLHIFSKPMQLVTEKGKENMIQRGTYNYQYRSNRPVKDGSYLVIAEYQ
                     PTFWSKNKAGWKQAGIKEMPDASYCEQTRMFGKNIVNVGHESADTAIITKPVGQNLEI
                     VPLDNPANIHVGERFKVRVLFRGEPLPNATVTATFDGFDTSDRSKTHKTEAQAFSDST
                     DDKGEVDIIPLRQGFWKANVEHKADFPDQSVCQKQANYSTLTFQIGHSHH"
BASE COUNT         1050 a         1106 c         1435 g         1285 t
ORIGIN      
        1 aatttaatcc actatatttg cttgatttca tccgtttgca atggaaacgg atggcgcgat
       61 gtgcctgtct ttcagacggc atagtccgcc gtcagcagcc gcaggacatg tcttcagagg
      121 cttgcaggct gatgtctctg cgttttttgg ctttttcgta gcggcagcgt tggcggtcgg
      181 tcaggatttc cagcggaggg acagggacgg gtttgccgtc tttgaccgca accatcgtga
      241 agtagcagct gttggtgtgg cggatttcgc cggtgcggat gttttgtgct tcgacacgga
      301 tgccgatttc catcgaggtg cgtcccgtgt agttgacagc ggcgtaaaag gtaaccaaat
      361 cgccgatgtg gatgggttct ttaaacagga ctttgtcaac cgacagggta acgcaataat
      421 tgccgctgta acggctggcg caggaatagg cgacttggtc gagcaggagc aggagttcgc
      481 cgccgtgtac gttgccgctg aaattggcgg tgtccggcat catcagttcg gacataatga
      541 gttcgtggga aggcagttgg cgttgttgtg tcatggtgta cctgttttaa gaaagggtgt
      601 tttgaaatgg gtgcggggaa attttaggga atggggaagt ggaattcaag ctaaaaaaag
      661 ctatgatggg atagtctgcc gaaatggacc gccgatgccg tctgaagcct tcagacggca
      721 ttttgtttag gaaagccaaa aacggaagac caggaaaaac acgagtgcca atacggcgac
      781 ccaaacgacg agcatgaatc cggcaactgc ccgtcccata cggtaaaccg ggtttttgcg
      841 ttcgtcttcg atgggggagg tgtggtgttt ttcgggttgt ccggacattt tgttctcaat
      901 cggaaaagtt ggaaacgggc gtaaggttat gttgccgtgc aaaaagattc aagaaggaag
      961 gtcagcagcc gtcttcccaa ttttcgtccc aagcgtgttt caatgccgtc tgaacggtat
     1021 cggcatcgaa tccgcgatag gcgaggaaac gcgcctgttt ttgtttttct ttaaggtcgg
     1081 cggcggggtg tttgaatttt ttacgcaaca cgtctatggc ggtctgtttt tcgcttgagc
     1141 ggtcgggaag caggttgcgg ctggtttctt catctatgcc ctgttgcgcc aaagcctgtt
     1201 tcagcctcaa tgaaccgtgt ttgcggcttt tgctgcggat ataggcttcg gcatagcgca
     1261 aatccgactg ccagttgcgt tcggcaaatt cgtttaacac gttttccaac tcttcttcgc
     1321 tttcggcgtg cggtgcaagt ttgcgtttca gaccgatgcg gctgacttct tggcgcgaga
     1381 ggatgtccat cgcgcgggcg cgtagggatt tttgcggttt catggcggcg gtttcggcgt
     1441 ggggcaggtt tcagacggca tgggaaacgg attccgatgc cgtctgaaca gattgtttta
     1501 ttcttcgtct ttatttttct gcggttgcag gttttcgtaa atttcgggca gcgagccgat
     1561 aatccagtcg gggcgggtcg catcgtcttg cgagagcagc gtcatatcgc cgtaaccgaa
     1621 ggtaacgccg acgctcaggc agccggcggc tttggcggcg atgatgtcgt tgcgcgagtc
     1681 gccgaccata accatgtttg caacatcgat acccaaaact tcggcggcat gccgcagcgg
     1741 cagggggctg ggttttttct cgggcaggct gtcgccgccg agtatcaggc tgaagtagtc
     1801 ggcaagtccg agctgtttca acagttcgac ggcaaggatt tcgtttttgt tggtaatgac
     1861 tgccagcggg atgcccaaag atttgagcaa tgccagcccg gcttcggttt cgggataggg
     1921 gcgggtgaag acgctcaaat ggtcgcggta gtatttcata taggatacga aacctttttc
     1981 ccacagttcg gaatcggctt cgcggtcgcg gtcgttggtg aggacgcggt gaaccagttt
     2041 gccgatgccg tcgcccacat agctttcgac cacttttgca ggcagcggtt tcataccgag
     2101 ttgctccaac atcgcttctg cggcggcggc aaggtcgggg acggaatcgc acagtgtgcc
     2161 gtccaaatcg aaggcgacgg cttggacgtg ttcgatggct gcattcataa tctgatttcc
     2221 tgtcgggttg aaagggttta ttttaacatc gtttgcacag ggcttctaat gtatagattg
     2281 ttaacaatcg caacaggttt tgcaggcggt gttttcggat ttcggggcgg aatcgggcaa
     2341 gggtttgaaa tcccggcgat gttccaatta aatttttaaa aaataaaagg atgcctatat
     2401 ctttatttaa tttgacattt atttttcgga cgcgcgcgct gctttttcag gcggagtccg
     2461 ggctgattcc gtgcggcttg aaaaataaaa tcatatatag attaatcaaa tcgggcttat
     2521 gccgactaca cgctattaca ttttgtcggg aaattggtta tagtaatgag cgaaatgcac
     2581 gcccctgaaa atctttttgt gaaaaggaag caaaatgtct gaagcccttg caaaagaaac
     2641 cctcaatccg tttgaaatcg cgcgcaaaca ggtcaaaacc gcctgcgatc ggctgaaaac
     2701 cgatccggcc gtttatgaaa tcctgaagag tccgacccgc gtgttggaag tcaatttccc
     2761 cgtcaaactc gacgacggca cggtcaaaac cttcacgggc taccgttcgc aacacaacaa
     2821 cgccgtcggc ccctataaag gcggcgtgcg cttccatccc ggtgtgaatc tggacgaagt
     2881 caaagccctg tcaatttgga tgaccatcaa atgctgcgtg gccggcattc cttacggcgg
     2941 cggcaaaggc ggcgttacct tggatccgcg cgattattcc gaggcggaac tggaacgcat
     3001 cgcccgcgct tattccgaag ccatttctcc gctcatcggc gaaaaaatcg atattcccgc
     3061 ccccgatgtg aataccaacg gcaaaattat gtcgtggatg gtggatgctt atgaaaacgt
     3121 ggtgaaacat tccgcgccgg gcgtatttac cggaaaaccg gttgagttcg gcggctcttt
     3181 ggcgcgtacc gaggctaccg gttacggcgt gaacctcgcc gccgtccaag ctttggaaaa
     3241 actgggcaag gacgtgaaag gcgcgactta cgccatccaa ggcttcggta atgtcggtta
     3301 ccacacaggt tattacgcgc atcaatccgg cgcgaaagtt gttgcggttt ctactgttga
     3361 cgttgccatc tacaatgaaa atggcttgga tatggaagcc ctgtttaaag agttccaaga
     3421 aaaaggcttc atcaccaacg aagccagtta cggcaaagaa attaccaacg ccgaactttt
     3481 ggctttggat gtggacgtac tcgccccttg cgcgttggaa aaccaactga cttccgaaaa
     3541 cgccggtaaa gtccgcgcga aaatcgtggt cgaaggcgcg aacggcccga ctacgcccga
     3601 agccgacgtt atcctgcgtc aaaacggcgt attggtcgtg cctgatattt tggcgaactg
     3661 cggcggcgtg gtggtatctt attttgaatg ggtacaaaat ctgcaaggct actactggga
     3721 gtttgacgaa gttcaggaaa aagaaaccgt cgtcctgcgc cgtgcgttcc gcgatatatg
     3781 gaacttggcg caagagtatg atgtcgattt gcgaaccgcg tcttacatga tgagtatccg
     3841 ccgtgttgaa aaagcgatga aactgcgcgg ttggtattga tgtttgaaca aaaaatgccg
     3901 tctgaagcct tcagacggca ttttgtgcgg gcgggattaa tggtgcgaat ggccgatttg
     3961 gaaggttaaa gtcgagtagt tcgcctgttt ttggcacacg ctttgatcgg ggaagtcggc
     4021 tttgtgttcg acattggctt tccagaagcc ttggcgcaag gggatgatgt ccacttcgcc
     4081 tttgtcgtct gtgctgtcgg agaaagcctg tgcttcggtt ttgtgcgttt tgctgcggtc
     4141 gctggtgtcg aagccgtcaa aggtggcggt aacggtggca ttgggcagcg gttcgccacg
     4201 gaacagaacg cggactttga agcgttcgcc tacgtgaatg ttggcgggat tgtccagcgg
     4261 gacgatttcc aagttttgtc cgaccggttt ggtgatgatg gcggtgtccg cgctttcgtg
     4321 tccgacgttg acgatgtttt tgccgaacat tcgggtttgt tcgcaatagc ttgcgtcagg
     4381 catttctttg atgcccgcct gtttccagcc tgctttgttt tttgaccaga aagtaggctg
     4441 atattcggcg atgacgaggt aactgccgtc cttaacggga cggttgcttc ggtactggta
     4501 gttgtatgtg ccgcgttgaa tcatgttttc cttgcctttt tcggtaacca gctgcatcgg
     4561 tttgctgaag atgtgcaggc ggtctttggc gatgggttcg agttcgggaa attcgccgta
     4621 gcccaagtcg gctttaaggt attcgccgcc gtgcgtgtgg gcggtttcga cccagacgcg
     4681 gtgggcgtgg gcggatgtgg caaatagggc ggaaacggcg agcagtgtca atgttttctt
     4741 catggtgcag cctttgtctc gtgtgggtta aagattttgt tatgttataa caaaataggt
     4801 atcgtgtgaa gacggatttg ctgtctgaaa actgtctttt tgtatagtgg attaacaaaa
     4861 accagtacgg cgttgc
//
LOCUS       DAWITQ010000152         4773 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.152, whole genome shotgun sequence.
ACCESSION   DAWITQ010000152 DAWITQ010000000
VERSION     DAWITQ010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4773)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4773)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4773
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.152"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            128..1258
                     /locus_tag="WIX18_001815"
     CDS             128..1258
                     /locus_tag="WIX18_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEZ5238878.1"
                     /translation="MKIVFITTVASSIYGFRAPVIKKLIGKNHQVYAFVSEFSDNELD
                     IIREMGVTPVTYRSNRSGLNPFSDIKSTFLIFKELKKISPDLVFPYFAKPVIFGTFAA
                     KLAGVPRIVGMLEGLGFAFTPQPEGIPLKTKIIKGILIALYRIALPMLESLIVLNPDD
                     KDELTDKYGIKIKNIHILGGIGLDSRQYPYSEADIPDEKEPVKFLFIGRFLKEKGIDD
                     FIRAAEQVKDKYPDTVFTALGAIDKSRGGGGDLERLAARDIIRFPGFVNNVSEVIKEH
                     HIFVLPSYYREGVPRSTQEAMAVGRAVITTDVPGYRETVADKVNGFLIEPWNPRILAE
                     KMIYFIENREAVRLMGNASYAIAKDKFDAEKVDLKLLDILKA"
     gene            complement(1747..2598)
                     /locus_tag="WIX18_001816"
     CDS             complement(1747..2598)
                     /locus_tag="WIX18_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-54 factor"
                     /protein_id="HEZ5238879.1"
                     /translation="MTLLGIKLKQTQQLNQRLQQSLRVLQMSGIELEREVENWLSDNP
                     LLERKDTDEFSDAEFSHYTAPARQIGGDEGEDMLSNIAGEQDFKQYLHAQVCEHPLSD
                     QESACVHILIDFLDEQGYLTDSIEDILDHTPLEWMLDEAMLKQALTALKKFDPAGVAA
                     ADLNESLILQIERSGECAAKPSALHIVRNALDSIDGNRSQTLARIKKRLPQTDSGTLE
                     AALDLIASLNPFPAAGFASSTPTPYSDEALANLLAFRGMEVSRRTIAKYRESFEIPAA
                     HKRKTAE"
     gene            2946..4460
                     /gene="katA"
                     /locus_tag="WIX18_001817"
     CDS             2946..4460
                     /gene="katA"
                     /locus_tag="WIX18_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase KatA"
                     /protein_id="HEZ5238880.1"
                     /translation="MTTSKCPVTHLTMNNGAPVADNQNSLTAGPRGPLLAQDLWLNEK
                     LADFVREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFTTVAG
                     ERGAADAERDIRGFALKFYTEEGNWDVVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNM
                     RSATNNWDFWTLLPEALHQVTIVMSDRGIPAGYRHMHGFGSHTYSFWNEAGERFWVKF
                     HFRTQQGIKNLTNEEAAKIIADDRESHQRDLYEAIERGEFPKWTMYIQVMPEADAEKV
                     PYHPFDLTKVWPKKDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGVGASPDKM
                     LQARLFNYADAQRYRLGVNFRQIPVNRPRCPVHSNQRDGQGRADGNYGSLPHYEPNSF
                     GQWQQQPDFAEPPLKINGDAAHWDYRQDDDDYFSQPRALFNLMNDAQKQALFGNTAAA
                     MGDAPDFIKYRHIRNCYRCDPAYGEGVAKALGLTVEDAQAARATDPALGQAGLL"
BASE COUNT         1203 a         1285 c         1183 g         1102 t
ORIGIN      
        1 ggcaacgccg taccggtttt tgttaatcca ctataatacg caggcaaacc caagccttgc
       61 cggattgcag gatgaaaccc tgccgtagca gaccgcattt ccaatccata ttcaaggtgt
      121 ccgccttatg aaaatcgttt ttatcacaac agtcgcatcc agcatttacg gtttccgcgc
      181 ccccgtcatt aaaaaattaa tcggcaaaaa ccatcaggtg tatgcctttg tatcggagtt
      241 ttccgataat gaattggata ttatcaggga aatgggggtt acacccgtta cctaccgttc
      301 aaaccgcagc gggctgaacc cgttttccga tataaaatcc accttcctca tctttaaaga
      361 actcaaaaaa atatcgccgg atttggtttt cccttatttc gcaaaacccg tgattttcgg
      421 cacttttgcc gcaaaactgg caggcgtgcc cagaatcgtc gggatgctgg aaggtttggg
      481 attcgcattt accccgcagc cggaaggcat accgttaaaa acaaaaatca taaaggggat
      541 cttgattgcc ttataccgca ttgccctgcc gatgttggaa agcctgattg tattaaaccc
      601 cgacgacaaa gacgaactga cggacaaata cggcatcaaa ataaaaaaca tccatatttt
      661 gggcggaatc ggtctggatt cgcggcaata tccttattcc gaggcggata ttcccgatga
      721 aaaagaaccc gtaaaattcc tctttatcgg cagatttctg aaagaaaagg ggattgatga
      781 ttttattcgg gcggcggaac aggttaagga caaatacccc gatacggttt ttaccgcttt
      841 gggcgcaatc gacaaatcac gcgggggggg gggcgatttg gaacggcttg ccgcccgcga
      901 tattatccgt ttccccggtt ttgtgaacaa tgtttccgaa gtgataaaag aacatcatat
      961 attcgtattg ccgtcttatt atagggaagg cgttccccga agcactcagg aggcaatggc
     1021 cgtcggcagg gcagtgatta cgacggatgt ccccggatac agggaaacgg tcgccgacaa
     1081 ggtcaacggc ttcctgatcg aaccttggaa tccccgcatc ttggccgaaa aaatgattta
     1141 ttttatcgaa aacagggaag ccgtccgcct gatggggaat gcaagttatg cgattgccaa
     1201 agataaattc gatgccgaaa aagtcgattt gaaattgctc gatattttga aggcgtaaac
     1261 aaggctgccc gcttttgagt ttcggtcatt tctgataaac ccccgtcatt cccgccacac
     1321 ccccgtcatt cccgcgaaag cgggaatcca ggttcgttga gtttcggtca tttccgataa
     1381 attcttgcaa ctttgagttt ctagattccc actttcgtgg gaatgacggc ggagggttgc
     1441 tgttttcccg acaaattccc gccatctaaa atctcgttat ccatacaaga accgaaaatc
     1501 ttgccattct cacaaaaaca gaaattcaaa aacagaaatc ccaaaccccc gtcattcccg
     1561 cgaaagcggg aatccaggtt cgttgagttt cggtcatttc cgataaattc ttgcagcttt
     1621 gcgtttctag attccctctt tcgcgggaat gacgggatgc aggtttccgc gcggacggat
     1681 tcggcattcc cgctttcgca gaaatgccgg cttttggttt gttgtcttta taagattatt
     1741 cggcaattat tctgcggttt tgcgtttgtg tgctgccgga atctcaaagg attctctgta
     1801 tttggcaatg gtgcggcgag aaacctccat gccgcggaaa gccagcaggt tggcgagcgc
     1861 ctcgtcagaa tacggcgtgg gcgtggacga ggcaaaaccg gcggcgggaa agggattgag
     1921 cgaagcaatg aggtcgagtg cggcttcgag tgtgccgctg tcggtttggg gcaggcgttt
     1981 ttttattcgc gcgagggttt ggctgcggtt gccgtcaatg ctgtcgaggg cgtttcggac
     2041 gatatgcagg gcggagggtt tggcagcaca ttcgcccgat ctttctatct gcagtatcag
     2101 cgattcgttc aaatcggcgg cggccacgcc tgccgggtcg aattttttca atgcggtcag
     2161 ggcttgtttc agcattgctt catccaacat ccactccaag ggcgtatggt cgaggatgtc
     2221 ttcgatgctg tcggtcagat aaccttgctc gtcaaggaaa tcgatgagga tgtggacaca
     2281 ggcggattct tggtcggaaa gcgggtgttc gcatacttgc gcgtgcaggt attgcttgaa
     2341 atcctgctcg ccggcgatgt tggacagcat atcttcgcct tcgtctccgc cgatttgacg
     2401 ggcaggcgca gtgtaatggc tgaactcggc atcggaaaat tcatccgtgt ctttgcgttc
     2461 gagcaggggg ttgtccgaca gccagttttc gacctcgcgt tcaagttcga tacccgacat
     2521 ctgcaatacg cgcaaagatt gttgcagccg ctggttgagc tgctgggtct gtttgagctt
     2581 tattccgagt aaggtcatga taatgtgggg aaaattgtta ttttcagcct gtcggcgcaa
     2641 aaaatgccgc aaagcgtcat tgcattataa atggttttaa tgagcgggtt cggattccgt
     2701 tcgataacaa aaaacaaacg aaaatcaaga accgattgct tataataata ttaaatcgat
     2761 ttcatagttt taatagcgaa aatcttggcg tatagtcgca tccatagttt ttacaaaagg
     2821 gaaataaaat gtcgattcaa gaaatttatt gcaatcaaga aaccggttac gaatacgctt
     2881 tccgccaaat cgtactgtaa gccgtttacc cccatttgac caacctgaga aaaggaacaa
     2941 gagcgatgac tacctccaaa tgccctgtaa cccatctgac catgaacaac ggcgcgcctg
     3001 ttgccgacaa tcaaaacagc ctgaccgccg gtcctcgcgg ccctctgctg gcgcaggatt
     3061 tgtggctgaa tgaaaaactc gccgacttcg tgcgcgaagt catccccgaa cgccgtatgc
     3121 acgccaaagg ttcgggcgcg ttcggtacgt ttaccgtaac gcacgacatc accaaataca
     3181 cccgcgccaa aatcttcagc gaagtcggca aaaaaaccga gatgttcgcc cgtttcacca
     3241 ccgtggcagg cgaacgcggc gcagccgatg cagaacgcga catccgcggt tttgccttga
     3301 aattttatac cgaagaaggc aactgggatg tggtcggcaa caacacgccc gtgttcttcc
     3361 tgcgcgaccc gcgtaagttc cccgacctga acaaagccgt caaacgcgac ccgcgcacca
     3421 atatgcgctc tgccacaaac aactgggact tctggacgct gctgcccgaa gcactgcacc
     3481 aagttaccat cgtgatgagc gaccgcggca tccccgccgg ctaccgccat atgcacggct
     3541 tcggttcgca tacctacagc ttctggaacg aagcaggcga gcgtttttgg gtgaaattcc
     3601 atttccgcac ccaacaaggc attaaaaacc tgaccaacga agaagccgcc aaaatcatcg
     3661 ccgacgaccg cgaaagccat cagcgcgact tatacgaagc catcgaacgc ggcgagtttc
     3721 cgaaatggac gatgtacatc caagtcatgc ctgaagcaga cgcggaaaaa gtaccttatc
     3781 atccgtttga cttgaccaaa gtttggccga aaaaagacta tccgctgatt gaagtgggcg
     3841 aattcgagtt gaaccgcaat cccgaaaact tcttcgccga tgtggaacaa tccgccttcg
     3901 caccgagcaa cctcgttccc ggtgtcggcg ccagcccaga taaaatgttg caagcccgtt
     3961 tgttcaatta cgccgacgcg caacgctacc gcttgggcgt gaacttccgc caaatccctg
     4021 tcaaccgtcc gcgttgccct gttcacagca accagcgcga cggacaagga cgcgccgacg
     4081 gcaactacgg cagcctgccg cactacgaac ccaacagctt cggccaatgg cagcagcagc
     4141 ccgacttcgc cgaaccgcct ttgaaaatca acggcgacgc ggcgcactgg gactaccgcc
     4201 aagacgatga cgactatttc agccaaccgc gcgccctgtt caacctgatg aacgacgcgc
     4261 agaaacaggc attgttcggc aacaccgccg ccgcaatggg cgacgcgccc gacttcatca
     4321 aataccgcca tatccgcaac tgctaccgtt gcgatccggc atacggcgaa ggcgtggcaa
     4381 aagccctcgg actgactgtc gaagacgcac aagccgcccg cgcgaccgac cccgcactgg
     4441 gtcaggccgg tttgctgtaa gggggcatta tgtggatgga aattgaagaa atcctgtccc
     4501 gcgccgtccg ctaccggaaa taaccgggca taaaaatgcc gtctgaaacg tcgtttgacc
     4561 gcttcagacg gcatttccac accccacccc cgccgtttca gtgggcgttt tttattaaac
     4621 gcaaaatatc ccgtcattcc cgccccacag cccacttttc cgccgtcatt cccgcaccat
     4681 ccccaccggt tcaaaccggc acgaaaactt ttccgcgtca ttcccgcgaa agcgggaatc
     4741 tagaacgtaa aatctaaaga aaccgttttt ccc
//
LOCUS       DAWITQ010000153         4733 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.153, whole genome shotgun sequence.
ACCESSION   DAWITQ010000153 DAWITQ010000000
VERSION     DAWITQ010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4733)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4733)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4733
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.153"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            66..326
                     /locus_tag="WIX18_001818"
     CDS             66..326
                     /locus_tag="WIX18_001818"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238881.1"
                     /translation="MENAAASPAGRFRRHSRRRKCPTLKAQTHTKNRMPAPATIRQIP
                     LFFPNRLQVSPIRRVMPPPPFKGNARVNGFAVGKAAGYRYVS"
     gene            433..957
                     /gene="nspA"
                     /locus_tag="WIX18_001819"
     CDS             433..957
                     /gene="nspA"
                     /locus_tag="WIX18_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein NspA"
                     /protein_id="HEZ5238882.1"
                     /translation="MKKALATLIALAIPAAALAEGASGFYVQADAAHAKASSSLGSAK
                     GFSPRISAGYRINDLRFAVDYTRYKNYKAPSTDFKLYSIGASAIYDFDTQSPVKPYLG
                     ARLSLNRASVDLGGSDSFSQTSTGLGVLAGVSYAVTPNVDLDAGYRYNYIGKVNTVKN
                     VRSGELSAGVRVKF"
     gene            1093..1482
                     /locus_tag="WIX18_001820"
     CDS             1093..1482
                     /locus_tag="WIX18_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEZ5238883.1"
                     /translation="MSKTIIHTDKAPAAIGAYSQAVRAGDTVYMSGQIPLDPATMTVV
                     GNGDFRAEARQVFQNLQAVAEAAGGTLADIVKLNAYLTDLGNFAVFNEVMAEFIAEPF
                     PARAAVGVASLPKGVQVEAEAVLVLNA"
     gene            1560..2390
                     /locus_tag="WIX18_001821"
     CDS             1560..2390
                     /locus_tag="WIX18_001821"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="symmetrical bis(5'-nucleosyl)-tetraphosphatase"
                     /protein_id="HEZ5238884.1"
                     /translation="MAHYAIGDIQGCFDELTALLGKIGFNHGTDTLWLTGDIVNRGPK
                     SLETLQFCIRHENSVQIVLGNHDLHLLAVGCGEGAPKRSDTIEPILKHPDGKKMLDWL
                     RAQPLLIREGSRVMVHAGILPQWRIAKAESLAREAEAELRGKKYVKFFSKMYGNKPAA
                     WDEGLEGYARLRFIVNAFTRMRALTFKNELDFDYKSTVKKMPPYLRPWFKAPDRQNLD
                     RTIIFGHWSSLGYTNADNVISLDTGALWGGQLTAVNLETEEITQVQAAGGIDWKSFAK
                     "
     gene            2405..3862
                     /locus_tag="WIX18_001822"
     CDS             2405..3862
                     /locus_tag="WIX18_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HEZ5238885.1"
                     /translation="MHKILPIAHVLSRLGMLFSFILLIPAALSYAFSDGAYTAFATTA
                     TVTLSGSCIVRLATLRFRRELRPRDGFTLVLMLWLAFAAMAAMPMYLYFPNMGFTDAF
                     FESMSGLTTTGATVIPHVDGLAPSVNFWRHMLNWLGGMGIIVLAVAILPMLGVGGTQL
                     FKAEIPGIDKESKMSPRISQVAKKLWFGYTLITILAAACLHFAGMGWFDAVCHAMATL
                     SLGGFSTHDASIAYYNSPLIEAVIIVFTIVGGINFANHFAALNSRSLKTYWKDEECRT
                     MLLLLSGSILAAALYLWHTGYYAGFTESLRYTAFNFVSIGLANGLANTDFAQWPLLIS
                     LWMFFLANILANSGSTGGGIKTIRALVLFKFSLREMMVLLHPKAVRTVKISGKAIPDR
                     LALTVMSFIFIYFMTVVLFSFLLMASGMEFTTAFTAVIACITNSGPGLGEVGPAGNYA
                     GLDVMQKWICVTAMLLGRLEIFTVFILFTPAYWKK"
     gene            complement(3903..4292)
                     /locus_tag="WIX18_001823"
     CDS             complement(3903..4292)
                     /locus_tag="WIX18_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238886.1"
                     /translation="MWKISKENCEDLGFAIVCMFYDAINLSEFKLWLDIVVRDTPIDT
                     IPLYIFDLIDFDKSIGEIYDVIGVVNYGYISNDQKNALTGIAFLRGIDVYDPPISKEK
                     ALKALEKYPEIYQRFQHFFPFVELPLF"
     gene            complement(4474..>4733)
                     /locus_tag="WIX18_001824"
     CDS             complement(4474..>4733)
                     /locus_tag="WIX18_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238887.1"
                     /translation="HFQITDESYKVKFSEYLFENKEKNDWDRNPAINYFFEIIDDSYM
                     DWLKEESFDFFEKKYYKAYIFFFSDSVIEVISSTEPVFYSK"
BASE COUNT         1154 a         1475 c         1020 g         1084 t
ORIGIN      
        1 cgcaaacaaa tcggcggccg cccgggaaaa cccgccccga acgcgtccgg aaaatatgct
       61 tatcgatgga aaacgcagcc gcatcccccg ccgggcgttt cagacggcac agccgccgcc
      121 ggaaatgtcc gacgcttaag gcacagacgc acacaaaaaa ccgtatgcct gcacctgcaa
      181 caatccgaca gataccgctg ttttttccaa accgtttgca agtttcaccc atccgccgcg
      241 tgatgccgcc accaccattt aaaggcaacg cgcgggttaa cggctttgcc gtcggcaaag
      301 cagccggata ccgctacgta tcttgaagta ttgaaaatat tacgatgcaa aaagaaaatt
      361 taagtataat acagcaggat tctttaacgg attcttaaca atttttctaa ctgaccataa
      421 aggaaccaaa atatgaaaaa agcacttgcc acactgattg ccctcgctat cccggccgcc
      481 gcactggcgg aaggcgcatc cggcttttac gtccaagccg atgccgcaca cgcaaaagcc
      541 tcaagctctt taggttctgc caaaggcttc agcccgcgca tctccgcagg ctaccgcatc
      601 aacgacctcc gcttcgccgt cgattacacg cgctacaaaa actataaagc cccatccacc
      661 gatttcaaac tttacagcat cggcgcgtcc gccatttatg acttcgacac ccaatcgccc
      721 gtcaaaccgt atctcggcgc gcgcttgagc ctcaaccgcg cctccgtcga cttgggcggc
      781 agcgacagct tcagccaaac ctccaccggc ctcggcgtat tggcgggcgt aagctatgcc
      841 gttaccccga atgtcgattt ggatgccggc taccgctaca actacatcgg caaagtcaac
      901 actgtcaaaa acgtccgttc cggcgaactg tccgccggtg tgcgcgtcaa attctgatat
      961 gcgccttatt ctgcaaaccg ccgagccttc ggcggttttg ttttctgcca ccgcaactac
     1021 acaagccggc ggttttgtac gataatcccg aatgctgcgg cttctgccgc cctatttttt
     1081 gaggaatccg aaatgtccaa aaccatcatc cacaccgaca aagcccccgc cgccatcggc
     1141 gcgtacagcc aagccgtccg agcaggcgac accgtttaca tgagcggtca aatccccctc
     1201 gatcccgcca cgatgaccgt cgtcggcaac ggcgatttcc gcgccgaagc gcgccaagtg
     1261 ttccaaaacc tgcaagccgt cgccgaagcg gcaggcggca cgctggccga catcgtcaaa
     1321 ctcaacgcct acctgaccga cttgggcaat tttgccgtct tcaacgaagt gatggcggaa
     1381 tttattgccg agcccttccc cgcccgcgcc gccgtcggcg ttgcctccct gccaaaaggc
     1441 gtgcaggtcg aagccgaagc cgtcctcgtt ttgaacgcat aattccacgt tcggactgca
     1501 tgatatttca aaaccatgcc gtccgaaccg caacactttc ccacttcaca acatctgcaa
     1561 tggcacatta cgcaatcggc gacatacaag gctgtttcga cgaactgacc gcgctgctcg
     1621 gcaaaatcgg tttcaaccac ggcacggaca ccctctggct gacgggcgac atcgtcaacc
     1681 gcggcccgaa atccctcgaa acgctgcaat tctgcatccg gcacgaaaac agcgtgcaaa
     1741 tcgtcctcgg caaccacgac ctgcacctgc tcgctgtcgg ctgcggcgaa ggcgcgccca
     1801 aacgcagcga cacaatcgaa cccatactca aacaccccga cggaaaaaaa atgctcgact
     1861 ggctgcgtgc gcaaccgctg ttgatacgcg agggcagccg cgtgatggta cacgccggca
     1921 tcctgccgca atggcgcatc gccaaagccg aatcgctcgc tagagaagcc gaagccgaac
     1981 tgcgcggcaa aaaatacgtc aaattcttct ccaaaatgta cggcaacaaa ccggccgcgt
     2041 gggacgaagg tttggaaggc tatgcccgcc tgcgcttcat cgtcaacgcc ttcacgcgga
     2101 tgcgcgccct gacctttaaa aacgaactgg atttcgacta caaatccaca gtgaaaaaaa
     2161 tgccgcctta cctgcgcccg tggttcaaag cccccgaccg gcaaaacctc gaccgcacca
     2221 tcatcttcgg acactggtcc tcgctgggct acacgaatgc cgacaacgtc atctcgctgg
     2281 acaccggcgc gctgtggggc ggacagctga ccgccgtcaa cctcgaaacg gaagaaatta
     2341 cccaagtcca agccgccggc ggcatagact ggaaaagctt cgcaaaataa cggaccgccc
     2401 cactatgcac aaaatcctgc ccatcgccca cgtcctctcc cgactgggta tgctgttttc
     2461 ctttatcctg ctgatacccg ccgccctctc ctacgccttt tcggacggcg cgtacaccgc
     2521 cttcgccacc accgcgaccg ttaccctttc cggctcgtgc atcgtccggc tcgccaccct
     2581 ccggttcagg cgcgaactgc gcccgcgcga cggcttcacc ctcgtcctga tgttgtggct
     2641 ggcgtttgcc gctatggcgg cgatgccgat gtacctgtat ttcccgaata tgggctttac
     2701 cgacgcattt tttgaatcga tgtcgggact gaccaccacc ggcgcgaccg tcatccccca
     2761 cgtcgacggg ctcgccccct ccgtcaactt ttggcggcat atgctcaact ggctgggcgg
     2821 gatgggcatc atcgtccttg ccgtcgccat cctgcctatg ctcggcgtag gcggcacgca
     2881 gttattcaaa gccgaaatcc ccggcattga caaagaaagc aaaatgtcgc cgcgcatttc
     2941 ccaagtggcg aaaaaacttt ggttcggcta caccctgatc accatcctcg cggcagcctg
     3001 cctgcatttt gccgggatgg gctggttcga tgccgtctgt cacgcgatgg cgaccctctc
     3061 gctgggcggg ttttccaccc acgatgccag catagcttat tacaactccc ccctcatcga
     3121 agcggtcatc atcgttttca ccattgtcgg cggcatcaat tttgccaacc atttcgccgc
     3181 cctcaacagc cgcagcctca aaacctattg gaaagacgaa gaatgccgga cgatgctgct
     3241 gctgctctcc ggcagcatcc ttgccgccgc cctgtacctg tggcacaccg gctattacgc
     3301 cggttttacc gaatccctgc gctacaccgc cttcaacttc gtctccatcg gactggcaaa
     3361 cgggctggcc aacaccgact tcgcacaatg gccgctcctg atttccctgt ggatgttttt
     3421 cctcgccaac atcctcgcca actccggctc gaccggcggc ggcatcaaaa ccatacgcgc
     3481 cctcgtcctg ttcaaattca gcctgcgcga aatgatggtg ctgctgcacc ccaaagccgt
     3541 ccgcaccgtc aaaatcagcg gcaaggccat acccgaccgc ctcgcgctga ccgttatgtc
     3601 cttcatcttc atctacttta tgaccgtcgt cctcttcagc ttcctgctga tggcgagcgg
     3661 tatggaattt accaccgcct tcaccgccgt catcgcctgc atcaccaact ccggccccgg
     3721 cctgggcgaa gtcgggcccg ccggcaatta cgccggtttg gacgtgatgc agaaatggat
     3781 ctgcgttacc gccatgctct tgggcaggct ggaaatcttc accgtcttca tcctcttcac
     3841 ccccgcctac tggaagaaat aaaaaatgcc gtctgaaaac ttttcagacg gcatattgtc
     3901 ttttaaaaaa gcggaagctc tacaaaagga aagaaatgct gaaacctctg ataaatttca
     3961 ggatatttct ctaaggcttt taatgctttt tcttttgaaa taggcggatc atagacatct
     4021 atccccctta agaaggcaat gcccgttaat gcattttttt gatcatttga aatgtaacca
     4081 taattaacga ctccaattac atcataaatt tcccctatac tcttatcaaa atcaatcaaa
     4141 tcaaaaatat acaatggaat tgtatcaata ggagtatctc tgacaactat atccaaccat
     4201 aatttaaatt cagaaagatt aatagcatca tagaacatac agactattgc aaatcctaaa
     4261 tcttcacaat tttctttact aattttccac ataattattt acctttatcc attgcttccc
     4321 aaccgataca tccggtattt tagattctcc tttgccgtca aacgctcttt tggttacctg
     4381 ctttgtatca aaaatgccgt ctgaaagccg aataccgctt cagacggtat tttgattgtt
     4441 gggtttttaa tcagagcttt gtttgataat ttgttatttt gaataaaata caggttctgt
     4501 cgagctgata acttctatta cagaatcgct aaaaaagaaa atataagcct tataatattt
     4561 cttttcaaaa aaatcaaaac tttcttcttt caaccagtcc atataactgt catctattat
     4621 ctcgaaaaaa taatttatag caggatttct atcccaatca tttttttctt tattttcaaa
     4681 taaatattct gaaaatttta ctttataaga ttcatctgtt atttgaaaat gaa
//
LOCUS       DAWITQ010000154         4689 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.154, whole genome shotgun sequence.
ACCESSION   DAWITQ010000154 DAWITQ010000000
VERSION     DAWITQ010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4689)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4689)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4689
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.154"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(418..954)
                     /locus_tag="WIX18_001825"
     CDS             complement(418..954)
                     /locus_tag="WIX18_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEZ5238888.1"
                     /translation="MDLREVKLGGETIYEGGFVSISRDKVRLPNGNEGQRIVIRHPGA
                     ACVLAVTDDEKVVLVRQWRYAANQATLELPAGKLDVAGEDMAACALRELAEETPYVAD
                     SVRLLYSFYTAVGFCNEKMYLFEAEGVRLGSTLANDEDEITETVLMSKEEVRQALAND
                     EIKDGKTLIGLQYWLMKD"
     gene            complement(988..1344)
                     /gene="folB"
                     /locus_tag="WIX18_001826"
     CDS             complement(988..1344)
                     /gene="folB"
                     /locus_tag="WIX18_001826"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HEZ5238889.1"
                     /translation="MDKIFLHGIKADTLIGVYGWERERLQTLIVDLDIGVPEKAGSDD
                     DIANTVHYAEVCETLRRHLKEQDFLLLEALAEYIADLVLGYFGAVWVRVKIVKPGILE
                     GVREVGVEIERGKRED"
     gene            1400..2002
                     /gene="plsY"
                     /locus_tag="WIX18_001827"
     CDS             1400..2002
                     /gene="plsY"
                     /locus_tag="WIX18_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HEZ5238890.1"
                     /translation="MFNIPAVAVSYLIGSLSFAVIVSKYYGMDDPRTYGSGNPGATNV
                     LRSGKKKAAALTLLGDAAKGLVAVLLARVLQEPLGLSDSAIAAVALAALVGHMWPVFF
                     GFKGGKGVATALGVLLALSPATALVCALVWLVMAFGFKVSSLAALTATIAAPLAALFF
                     MPHTSWIFATLAIAILVLLRHKSNIVKLLEGRESKIGGSR"
     gene            2079..2924
                     /locus_tag="WIX18_001828"
     CDS             2079..2924
                     /locus_tag="WIX18_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HEZ5238891.1"
                     /translation="MLSYRHAFHAGNHADMLKHFTLFLVLQYFNRKDKPYWYIDTHGG
                     AGVYNLEGSEAQKVGEYRQGIALLRQAKNLPTELNGFIAHIQKILPSPELYCGSPWLA
                     QSLTRVGDKLRLFELHPTDFVHLQNNMGEAGLGKRGQVLREDGYKGLISLLPPPPRRA
                     TVLIDPPYEEKQDYRHVTETLKAALKRFESGCYLIWYPCLSREESRKLPEELKKLLPD
                     NYLHAELHVHAPKADGFGMHGSGMFVINPPYLLAEQLAANLPALTRLLAQDEGARYLL
                     DSKIR"
     gene            3170..4144
                     /locus_tag="WIX18_001829"
     CDS             3170..4144
                     /locus_tag="WIX18_001829"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HEZ5238892.1"
                     /translation="MDTLTRFLPEHLQQNQLPEALGGVLLSVVSACTEINAKVRLGAL
                     AGVLGMAGTGNIQGEDQKKLDVIANNIMIDTLKANPAVAGLASEEEDSFVSAGENGRY
                     LVLFDPLDGSSNIDVNISVGTIFSILEKPEGALATESFLQTGRQQLAAGYILYGPQTQ
                     LVFTFGHGVYMFTLNAENEFVLTKEKPKVPESTKEFAINMSNRRHWLPPVQQYIDELL
                     AGETGTRGKNYNMRWVASMVAEIHRILMRGGVFMYPQDKRDPSKPGKLRLMYEANPMS
                     LILEQAGASASNAYQAMLDIQPENLHQRVAVFMGSSEEVAYLDRLHAK"
     gene            complement(4287..4505)
                     /locus_tag="WIX18_001830"
     CDS             complement(4287..4505)
                     /locus_tag="WIX18_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HEZ5238893.1"
                     /translation="MFPEYRDLISKLKQENSRFARLFDEHNELDDKITGLVNNPVTSG
                     AETIDELKKAKLKLKDELYAILQKAAGK"
BASE COUNT         1206 a         1402 c          985 g         1096 t
ORIGIN      
        1 ttctcaaatt caaattgggc ttttaggtct ataacaaaga aaaagccttg gtaggataaa
       61 cctaccaagg ctttttctta aaaaaacgct ctattaccgt gcctaaaaat gcaaaaaagt
      121 aaccgtcata acccttttgc caaaatcaat atcatcatcc gatgaatgaa ttgacggtat
      181 ataagaaaga attaataagc tcataaaccg gtaagaaaaa tcagtaacaa agatattcat
      241 tattaaccat tttaaaaatt atcatgttcg tttgggtaat tattataccc ttttccctct
      301 tattactaga gcacgaatga ctttaaagga cgcgcccaga gacaagccga aaaggcatat
      361 ctcatccgcc aaacaaaatg cccaccgact tactccggca ggcagttcaa caccctgtca
      421 atccttcatc agccagtatt gcaaaccgat taatgtcttg ccgtctttaa tttcatcgtt
      481 tgctaatgcc tgacggactt cttctttcga catcaatacg gtttccgtaa tctcgtcttc
      541 gtcattggca agcgtactgc ccaaacgcac gccttccgct tcgaacagat acattttttc
      601 gttgcaaaaa ccgaccgccg tataaaaact gtaaagcagg cgcacgctgt cggcaacata
      661 aggcgtttct tcagccagtt ctctcagcgc acacgctgcc atatcctcgc ccgccacatc
      721 cagcttgccc gcaggaagtt ccaatgtcgc ctgatttgcc gcataccgcc actgccgtac
      781 caaaacgacc ttttcatcat ccgttaccgc caacacgcac gccgctcccg gatgacggat
      841 gacgatacgc tgcccttcat tgccgttggg caacctgacc ttatccctgc tgatgctgac
      901 aaaaccgccc tcgtaaatgg tttcgccgcc taattttact tccctcaaat ccacttcata
      961 tctcctttcc gtttcctatt ctgccgttca atcttcacgc ttgccgcgct cgatttccac
     1021 gccaacctcg cgcacgcctt ccaaaatacc cggcttgacg attttcacgc gtacccacac
     1081 cgcgccgaaa tatcccaaaa ccaaatcggc aatatattcc gccaacgctt ccaaaagcag
     1141 gaaatcctgt tctttcagat gtcggcgcag tgtttcgcat acctcggcat aatgtaccgt
     1201 attggcaata tcgtcgtccg aacccgcttt ctcgggaacg ccgatgtcca aatcgacaat
     1261 cagggtctgc aaccgttcgc gttcccagcc gtacacgccg ataagcgtat ccgccttgat
     1321 gccgtgcaaa aagattttat ccataatccg ccccgttttt tgctaaaata accgcaccat
     1381 tctaagtaaa gtaccacaaa tgttcaacat accggctgtt gccgtttcct atctgatcgg
     1441 ctcactttct ttcgccgtca tcgtttccaa gtattacggg atggacgacc cgcgcaccta
     1501 cggatcgggc aatcctgggg cgaccaatgt tttacgcagc ggcaaaaaaa aggcggccgc
     1561 gctgacgctc ttgggcgatg ccgccaaagg tttagttgcc gttttgcttg cacgcgtgct
     1621 tcaagaaccg ctcggtttat ccgacagcgc aatcgctgcc gtcgcactcg ccgcgctggt
     1681 cgggcatatg tggccggtgt ttttcggatt taagggcggc aaaggcgtgg caacggcatt
     1741 gggcgtgctt ctggcactct ctcccgcaac tgccttggtc tgcgcgttgg tttggcttgt
     1801 tatggcattc ggcttcaagg tgtcctccct tgccgcatta accgccacaa tcgccgcccc
     1861 ccttgccgca ctgtttttta tgccgcatac ttcttggatt ttcgcaaccc tcgcaatcgc
     1921 catattggtg ttgctccgcc acaaaagtaa tatcgtcaag ctgctcgaag gcagagaaag
     1981 caaaatcggc ggcagccgct gatttcccat ccatccctgt ttatgccgtc tgaaccccgc
     2041 ttcagacggc atccgaatat cccgccgttt taccgactat gctcagttac agacacgcat
     2101 tccacgccgg caaccacgcc gatatgctca aacacttcac cttgttttta gtgctgcaat
     2161 atttcaaccg caaagacaag ccctactggt acatcgacac gcacggcggc gcgggtgtgt
     2221 acaatctcga aggcagcgag gcacaaaaag tcggcgaata ccggcaaggc atcgccctac
     2281 ttcgacaagc aaaaaacctg ccaaccgagt taaacggctt tatcgcgcac atacaaaaaa
     2341 tcctgccctc gcccgaactt tactgcggtt ctccgtggct ggcgcaatcg ctgacccgcg
     2401 tcggcgacaa attacgcctg tttgagctgc accccaccga ctttgtccat ctgcaaaaca
     2461 atatgggcga agcaggattg ggcaaacgcg gacaagtgtt gcgcgaagac ggttacaaag
     2521 ggctgatttc cctgctgccg cccccgccgc gccgcgccac cgtcctcatc gacccgccct
     2581 atgaggaaaa acaggactac cggcatgtaa cggaaacgct gaaagccgct ttaaaacggt
     2641 ttgagtccgg ctgttatctc atttggtatc cctgcctcag ccgcgaagaa agccgcaagc
     2701 tgcccgaaga attgaaaaaa ctcctgcccg acaactacct tcacgccgaa cttcacgtcc
     2761 acgcgccgaa agccgacggt ttcggtatgc acggcagcgg aatgttcgtc atcaatccgc
     2821 cctatctgtt ggcggaacaa ttggcggcaa acctccccgc cctgacgcgg ctgctggcgc
     2881 aagacgaagg cgcgcgctac cttttggaca gcaaaatccg ctgaccccga tgccgtctga
     2941 aacccttcag acaacatctc ccgtcaaata aacaaaaccg gacgatatac cggcagtcgg
     3001 cacttttaag aataaatatc ccctcatccg cctgccgcgt tccgacttgc cccatgccgt
     3061 ttttttacac tacaatcccc tagactatcc tgcaaaacgc accaaaggaa tacgccacaa
     3121 taacctgccg cccttcagac ggcacaaacc tttccgaaac gagcaaacta tggacacact
     3181 gacccgattc ctccccgaac acctgcaaca aaaccagctg cccgaagcac tcggcggcgt
     3241 tttactgtcc gttgtttccg cctgcaccga aatcaacgcc aaagtccgcc tcggcgcact
     3301 ggccggcgta ttgggtatgg cgggcacggg caatattcag ggcgaagacc aaaaaaaact
     3361 ggatgttatc gccaacaaca tcatgattga cacactcaaa gccaaccctg ccgttgccgg
     3421 tttggcaagc gaggaagaag actctttcgt aagtgccggt gaaaacggac gctatctcgt
     3481 cctattcgac cctttagacg gatcgtccaa tattgatgtc aacatttccg tcggtacaat
     3541 tttctccatc cttgaaaaac ccgaaggcgc attggcaacc gaatcattcc ttcaaacggg
     3601 cagacagcag cttgccgcag gctatatcct ctacgggcct caaacccagc tcgtattcac
     3661 attcggacac ggcgtatata tgttcacgct caatgccgaa aacgaatttg tgctgaccaa
     3721 agaaaaaccg aaagtacccg aaagtaccaa agaatttgcc atcaatatgt ccaaccgccg
     3781 ccactggctg ccccccgtcc aacaatacat cgacgagctc ttggcgggcg aaaccggcac
     3841 gcgcggcaaa aactacaata tgcgctgggt agccagcatg gttgccgaaa tccaccgcat
     3901 cctgatgcgc ggcggcgtgt tcatgtatcc gcaagacaaa cgcgacccgt ccaaacccgg
     3961 caaactgcgc ctgatgtacg aagccaaccc tatgagcctg atactcgaac aggcgggcgc
     4021 atcggcaagc aacgcatatc aagccatgct cgacatacag cccgaaaacc tgcaccaacg
     4081 cgtcgccgtc ttcatgggca gcagcgaaga agtcgcctat ctcgaccgcc tgcacgcaaa
     4141 atagacagac agccgttcac acaagtacac ggcggcggca atccgatacc gccgccgtta
     4201 tttcaaacag cacaagcctt ctggtcaaat gacaaaaatg ccgtctgaaa acatttcaga
     4261 cggcatttca aaaactcaaa cccgaattat tttcccgctg ctttttgcag gatggcgtac
     4321 aactcgtctt tcagtttcaa tttggctttt ttcagctcat cgatggtttc cgcaccgctg
     4381 gtaaccggat tgttgaccag accggtaatt ttatcgtcca gctcgttgtg ttcgtcgaac
     4441 agacgggcga agcgggaatt ttcctgtttc aatttggaaa tcaaatcacg gtattctggg
     4501 aacatatcgc tttcctctct tggtttacgg ttaaaaagtc aaactgaatc tttacattaa
     4561 ttataacaaa gataatattt ttatccagtg ttttatcgga tacggcaaaa ttttctttta
     4621 acaccgccgt ccggttgata aaaacgttga caatatcacg ctttacgcat aaattttcag
     4681 cctttccta
//
LOCUS       DAWITQ010000155         4650 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.155, whole genome shotgun sequence.
ACCESSION   DAWITQ010000155 DAWITQ010000000
VERSION     DAWITQ010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4650)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4650)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4650
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.155"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            110..1051
                     /gene="miaA"
                     /locus_tag="WIX18_001831"
     CDS             110..1051
                     /gene="miaA"
                     /locus_tag="WIX18_001831"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HEZ5238894.1"
                     /translation="MPTPKAFALLGPTACGKTALALKIAETLPVEIISLDSALVYRDM
                     DIGTAKPSHAERSFVPHHLIDIITPVQTYSAARFVEDCTRLIGEITARGKYPLIVGGT
                     MMYFRALTQGLNDLPEADACLRADLDEQKQMYGLDFLYRTLQKVDPETACRLKPNDSQ
                     RIGRALEVYYLTGKPMSTHLGSPTSHTLPFDLHTAALIPENRARLHENIALRFHLMLE
                     QGFIGEVENLRRLYPSLTADSPAIRCVGYRQAWEYLDGKTDFPAFVEKGIAATRQLAK
                     RQLTWLRKTPLDCVTDPFSDGNSCTRLIEAAKRFFGA"
     gene            1055..1774
                     /locus_tag="WIX18_001832"
     CDS             1055..1774
                     /locus_tag="WIX18_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family DNA transformation protein"
                     /protein_id="HEZ5238895.1"
                     /translation="MLTTPPLAPKTVAALHRLGIRTLEELRQNGAVQTFLLLKASGLT
                     LTKSTLWQLQSLLDGTPPQEMAQHDKTRLLAELKNHPPVAAFPPQGEMAHFMGLALEQ
                     AKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEMQNYRLD
                     GCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHTAIRG
                     GILQEECRAVLSRFFQNKRKG"
     gene            1779..2267
                     /locus_tag="WIX18_001833"
     CDS             1779..2267
                     /locus_tag="WIX18_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HEZ5238896.1"
                     /translation="MTALLVILALALIAAGTAGIVYPALPGLALMFAGTWLLAYSGGY
                     QIYGAGVLWTVGLISLAGILADYVAGIWGTKYTGAGKLAVRGALVGSIIGMFFSLPGL
                     ILGPFIGAAAGELIDRRNMLQAGKAGLGTLLGLVVGTAFKIGCAVSILFILLVKYIAY
                     LF"
     gene            2333..3085
                     /gene="rlmB"
                     /locus_tag="WIX18_001834"
     CDS             2333..3085
                     /gene="rlmB"
                     /locus_tag="WIX18_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HEZ5238897.1"
                     /translation="MANQRPIYGFHAVNARLWQNPKSIVELYVQEGKNDVRTREVLEK
                     AANENIRVYFADADRLNAISKGARHQGVVGFIDASKNHVHLEDVLENLSEPPLLLILD
                     GITDPHNLGACLRTADAMGVHAVIAPKDKSAGLNATVSKVASGAAETVPYITVTNLAR
                     TLRELKEYGIWIIGTDMGGNADLYHCDLPDSAAWVMGNEGDGMRRLTREHCDMLVSIP
                     MFGTVESMNVSVSAGMVLSETRRQRVLKNEKA"
     gene            complement(3147..4538)
                     /locus_tag="WIX18_001835"
     CDS             complement(3147..4538)
                     /locus_tag="WIX18_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine permease"
                     /protein_id="HEZ5238898.1"
                     /translation="MSGQLGKGADAPDLVYGLEDRPPFGNALLSAVTHLLAIFVPMIT
                     PALIVGGALELPVEMTAYLVSMAMVASGVGTYLQVNRFGPVGSGMLSIQSVNFSFVTV
                     MIALGAGMKEGGLTKDAMISTLLGVSFVGAFLVCFSAWLLPYLKKVITPTVSGVVVML
                     IGLSLVHVGITDFGGGFGAKADGTFGSMENLGLASLVLLIVLIFNCMKNPLLRMSGIA
                     VGLIAGYIVALFLGKVDFSALQNLPLVTLPVPFKYGFAFDWHAFIVAGAIFLLSVFEA
                     VGDLTATAMVSDQPIEGEEYTKRLRGGVLADGLVSVIATALGSLPLTTFAQNNGVIQM
                     TGVASRHVGKYIAVILVLLGLFPVVGRAFTTIPSPVLGGAMVLMFGLIAIAGVRILVS
                     HGIRRREAVIAATSVGLGLGVAFEPEVFKNLPVLFQNSISAGGITAVLLNLVLPEDKT
                     EAAVKFDTDHLEH"
BASE COUNT         1162 a         1490 c         1126 g          872 t
ORIGIN      
        1 aaggcatacg gtaaacacgc ccccttgccg tcggcgtgct tccgcaaacc aaaatataac
       61 gtcggcacgc tttccgctat aatccgtatt tttccaaacc tgaaacgtta tgccgacccc
      121 gaaagccttt gccctgctcg ggccgaccgc ctgcggcaaa accgcgctcg ccctcaaaat
      181 tgccgaaacc ttgcctgtcg aaatcatcag cctcgattcc gcgctggttt accgcgatat
      241 ggacatcggc acggcgaaac cgtctcatgc cgagcgttcc tttgtaccgc accaccttat
      301 cgacatcatt acgcctgttc agacatacag tgccgcccgt tttgtcgaag actgcacgcg
      361 tctgattggc gaaatcacgg cgcgtgggaa atatccgctg attgtcggcg gcacgatgat
      421 gtatttccgc gccctgaccc aaggtttgaa cgatttgccc gaagccgacg cctgcctgcg
      481 tgccgacttg gacgaacaaa aacaaatgta cggcttggat ttcctctacc gcaccctgca
      541 aaaagtcgac cctgaaacag catgccgtct gaaaccgaac gacagccagc gtatcggacg
      601 cgctttggaa gtttattatt taaccggcaa accgatgagt acgcatctcg gcagcccaac
      661 ctcccatacg ctccccttcg atttgcatac cgccgccctg attcccgaaa accgcgcccg
      721 cctgcatgaa aacatcgccc tgcgtttcca cctgatgctt gaacagggct ttatcggcga
      781 agtagaaaac ctgcgccgcc tctatcccag cctgaccgcc gactcccctg ccatacgctg
      841 cgtcggctac cgtcaggcat gggaatatct ggacggaaaa accgatttcc cggcatttgt
      901 cgagaaaggc attgccgcca cgcgccaact tgccaaacgc caactgactt ggttgcgcaa
      961 aacaccttta gactgcgtta ccgacccgtt ttcagacggc aattcatgca cacgcctgat
     1021 tgaggcggca aaacggtttt tcggcgcata aactatgctg accacgccgc cgctcgcccc
     1081 caaaaccgtc gccgccctac acaggctcgg tatccgtacg ctcgaagaac tgcggcaaaa
     1141 cggcgcggtt caaaccttct tgttattgaa ggcatcaggt ttgaccctca cgaaaagcac
     1201 gctgtggcag cttcagtcgc tgctggacgg cacgccgccg caagaaatgg cgcaacacga
     1261 taaaacccgc ctgcttgccg agttgaaaaa ccatccgccc gtcgccgcct ttcccccgca
     1321 aggcgaaatg gcgcatttca tgggtttggc attggaacag gcgaaactgt ccgcattaat
     1381 gggcgaaata cccgtcgggg cagtcatcgt ttcagacggc aaaatcatcg catcggcaca
     1441 caacacctgc attgccgact gcaatgtcag ccggcacgcc gaaatcaacg ccttggcaca
     1501 ggcaggcagc gaaatgcaaa actaccgcct tgacggatgc gacatctaca tcaccctcga
     1561 accctgcgcc atgtgcgcgt ccgcactgat acaggcacga atcaggcgcg tgatctacgg
     1621 tgcggcagaa cccaaaaccg gcgcggcagg aagcatcgtc aacctgtttg ccgacaaacg
     1681 cctcaatacg cacaccgcca tacggggcgg aatcctgcaa gaagaatgcc gcgccgtatt
     1741 aagccgtttt ttccaaaaca aaagaaaagg ttgaacctat gaccgccttg ctcgtcatcc
     1801 tcgccctcgc cctgatagcc gccggtacgg cgggcatcgt ttaccccgcc ctgcccggat
     1861 tggcattgat gtttgccgga acctggctgc tcgcctactc cggcggctac caaatctacg
     1921 gcgcgggcgt tttgtggacg gtcggactca tcagccttgc cggcatactg gcggactatg
     1981 tggcaggcat atgggggaca aaatataccg gagcgggcaa gctcgccgtt cgcggcgcat
     2041 tggtcggcag tatcatcggt atgtttttct cccttcccgg actaatactc ggtcccttta
     2101 tcggcgcggc ggcaggcgaa ctgatcgatc ggcgcaatat gcttcaggca ggtaaagcgg
     2161 gcttgggtac gctgttgggg cttgtcgtcg gcacggcgtt caaaatcggc tgcgccgtat
     2221 ccatcttgtt tatcctgttg gtgaaataca tcgcctacct gttttaaccc cttcagacgg
     2281 cataccggca aattgctaca atgccgtctg aacccttttc acaaagcacc atatggcaaa
     2341 ccaaagacct atctacggct tccatgccgt caacgcccga ttgtggcaaa accccaaatc
     2401 catcgtcgaa ctctatgtcc aagaaggcaa aaacgatgta cgcacgcgcg aagtgttgga
     2461 aaaggcggca aacgaaaaca tccgcgtata ttttgccgat gccgaccgcc tcaacgccat
     2521 cagcaaaggt gcgcgccatc agggcgtggt cggatttatc gatgcctcca aaaaccacgt
     2581 ccacctcgaa gacgtattgg aaaacttaag cgaaccgccg ctgctgctga tactcgacgg
     2641 catcaccgat ccgcacaacc tcggcgcgtg cctgcgtacc gccgacgcaa tgggcgtaca
     2701 tgccgtcatc gcaccgaaag acaaaagcgc ggggctgaac gccaccgtca gcaaagtcgc
     2761 cagcggcgcg gcggaaaccg tcccctacat caccgtaacc aacctcgccc gcaccctgcg
     2821 cgagctgaaa gaatacggca tttggatcat cggcaccgat atgggcggca acgccgacct
     2881 ttaccattgc gatctgcccg acagcgcggc atgggtgatg ggcaacgaag gcgacggtat
     2941 gcgccgcctg acacgcgaac attgcgacat gctggtgtcc atacccatgt tcggcacggt
     3001 cgaaagcatg aacgtctccg tgtctgccgg aatggtatta agcgaaaccc gccggcagcg
     3061 cgtattaaaa aacgaaaaag cgtaagcctc aaaaacaatg ccgtctgaaa cagggattct
     3121 gtttcagacg gcattcgttt tcaaaatcag tgttccaagt ggtcggtatc aaacttgacc
     3181 gccgcctcgg ttttatcttc gggcaagacc aaattcagca agactgccgt aatgccgccg
     3241 gcggaaatag agttttggaa caagacaggc aggtttttaa acacttccgg ctcaaacgcg
     3301 acacccaagc ccaaaccgac cgacgttgcc gcaattaccg cttcgcgcct gcggatgccg
     3361 tggctgacca aaatccgcac gcccgcaatc gcaatcaagc cgaacatcaa aaccatcgcg
     3421 ccgcccaaca ccggactcgg aatcgtcgta aacgcgcgtc cgacaacggg gaacagaccc
     3481 aacagcacca aaatcacggc aatatatttg cccacatggc gcgaagccac gccggtcatc
     3541 tgaatcacgc cgttgttttg cgcaaacgtc gtcagcggca gcgaacccaa agccgtcgca
     3601 atcaccgaca ccaagccgtc agccaacacg ccgccgcgca ggcgtttggt gtattcctcg
     3661 ccttcaatcg gctgatcgga caccattgcc gtcgccgtca aatcgccgac cgcctcaaac
     3721 acgctcaaca ggaaaatcgc gcccgccaca ataaatgcgt gccagtcgaa agcaaaaccg
     3781 tatttaaacg gtacgggcag cgtaaccagc ggcaggtttt gcagcgcgga aaaatccacc
     3841 ttgcccaaaa acagcgcgac aatgtaaccg gcaatcagac cgaccgcgat gccgctcatc
     3901 cgcaacagcg ggtttttcat gcagttgaat atcaacacaa tcagcaacac cagcgaagcc
     3961 agccccaagt tttccatcga gccgaacgtg ccgtccgcct tcgcgccgaa gccgccgccg
     4021 aaatcggtaa taccgacgtg taccaaactc aagccaatga gcatcacgac cacgccgctg
     4081 accgtcggcg taatcacttt tttcaaatac ggcaaaagcc acgccgagaa acacaccaaa
     4141 aacgcgccga caaacgatac acccaagagc gtcgaaatca tcgcatcctt agtcaaaccg
     4201 ccctccttca tccctgcgcc cagcgcaatc atcacggtaa cgaacgaaaa attcaccgac
     4261 tggatggaca gcatccccga accgaccggc ccgaagcggt tgacctgcaa ataagtgccg
     4321 acacccgacg caaccatcgc catcgacacg agatacgccg tcatctccac cggcaattcc
     4381 agcgcgccgc ccacaatcag cgcgggcgta atcatcggca caaaaatcgc caaaagatgg
     4441 gtaaccgcgc tcaagagcgc attaccgaac ggcggcctgt cttccaaacc gtacaccaaa
     4501 tcaggcgcat ccgcaccttt gcccaactga ccgctcattg tatttcctta ttttaaaggt
     4561 tgaaaaatcc aagcgcggat tgtagcgaat ctgccgcacg gcttcaattt gcatttcaga
     4621 cggcatccgt ctggtccaca cgtttaccac
//
LOCUS       DAWITQ010000156         4610 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.156, whole genome shotgun sequence.
ACCESSION   DAWITQ010000156 DAWITQ010000000
VERSION     DAWITQ010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4610)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4610)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4610
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.156"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            131..973
                     /locus_tag="WIX18_001836"
     CDS             131..973
                     /locus_tag="WIX18_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HEZ5238899.1"
                     /translation="MCQLLGMNCNTPTDIMFSFEGFRRRGGITDHHADGFGIGFFEGK
                     GVRLFHDDKPSANSPVADLVRAYQIKSENVVAHIRKASQGQTSLANTHPFMREMWGGY
                     WLFAHNGHLIDFFPEQGEFFHPVGTTDSERAFCHILNRLRTRFAARPDDDTLFDAIAG
                     LTHEIRKFGLFNFMLSDGIALFAHASTLLHYIVRQAPFGKARLLDDDVMVDFAEVTTP
                     SDRVAVIATLPLTRDESWSQLAVDELVMFREGNIVRHDRPENPVYMSVEEGLETARAA
                     GVAV"
     gene            1003..1467
                     /gene="nrdR"
                     /locus_tag="WIX18_001837"
     CDS             1003..1467
                     /gene="nrdR"
                     /locus_tag="WIX18_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor NrdR"
                     /protein_id="HEZ5238900.1"
                     /translation="MKCPFCAHPDTRVADSRLMDERNAVRRRRYCPNCGKRFGTLETA
                     ELKMPAVIGPDKKRSPFNAQRLRNDLTAAARKSALTPEQIDETVRLTEHRLYTSGQRD
                     IPSAALADMVLKELLRQDTEAAVRFAALHKRFDNPADFASWLAQAVKTDRKA"
     gene            1499..2608
                     /gene="ribD"
                     /locus_tag="WIX18_001838"
     CDS             1499..2608
                     /gene="ribD"
                     /locus_tag="WIX18_001838"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HEZ5238901.1"
                     /translation="MFSETDISMMQNALKLAALGRFSTSPNPRVGCVIAQGSQIVGQG
                     FHVKAGEPHAEVHALRQAGEMAQGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAA
                     MRDPNPLVAGKGLALLEAAGIKTECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSL
                     DGKTALSDGSSFWITGEDARADVQVLRAESCAVLTGIGTVLADNPRLNVRAFPTLRQP
                     ARIVLDSRLRLPLDSHLLTDGQSPTYIATLERDEDKLRPYREHAHIRILMPSETADGK
                     IDLHRLMRLLADEGYGEVMVEAGAKLTSAFLAEDLADEIVLYRSPKILGSGKDLFSLP
                     ENRAALSAPPLWTPVSTEILGHDVKTVFRKNGNAF"
     gene            2711..4129
                     /locus_tag="WIX18_001839"
     CDS             2711..4129
                     /locus_tag="WIX18_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HEZ5238902.1"
                     /translation="MDTKEILGYAAGSIGSAVLAVIILPLLSWYFPADDIGRIVLMQT
                     AAGLTVSVLCLGLDQAYVREYYAAADKDILFKTLFLPPLLSAAAIAALLLSRPSLPSE
                     ILFSLDDAAAGIGLVLFELSFLPIRFLLLVLRMEGRALAFSSAQLVPKLAILLLLLTV
                     GLLHFPANTAVLTAVYALANLAAAAFLLFQNRCRLKAVRRAPFSSAVLHRGLRYGIPI
                     ALSSIAYWGLASADRLFLKKYAGLEQLGVYSMGISFGGAALLFQSIFSTVWTPYIFRA
                     IEANAPPARLSATAESAAALLASALCLTGIFSPLASLLLPENYAAVRFIVVSCMLPPL
                     FCTLVEISGIGLNVVRKTRPIALATLGALAANLLLLGLAVPSGGARGAAVACAASFWL
                     FFVFKTESSCRLWQPLKRLPLYMHTLFCLASSAAYTCFGTPANYPLFAGVWAAYLAGC
                     ILRHRKDLHKLFHYLKKQGFPL"
     gene            4126..>4610
                     /locus_tag="WIX18_001840"
     CDS             4126..>4610
                     /locus_tag="WIX18_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ5238903.1"
                     /translation="MKIILTTSMAGLGGTETATVRLGRLLKRRGHDVILASSDGPFVG
                     EAQASGIRWQPVDFYRGGLAGYLKSTFTYARMLRREQPDIIDCQMARVVPACALAAKI
                     VSPKTKIIYHSHGLDAATYPKIAKLFDKLGVYIIGNCKHEREKLIRHGFPAGRIAYAY
                     NA"
BASE COUNT          917 a         1568 c         1175 g          950 t
ORIGIN      
        1 gaaccttaag tttccgtctt tgttttctgt tttcgcggga ataatgggga acaaaccgta
       61 tttcagacgg cattttcagt tcggggtata atccgaatac ttgcgaccat ctgaatcatt
      121 gggacaaact atgtgtcaac tgctgggcat gaactgcaat acgccgaccg atattatgtt
      181 ttcctttgaa ggcttccgcc ggcgcggcgg cattaccgac catcatgccg acggtttcgg
      241 catcggcttt ttcgaaggca aaggcgtgcg cctgttccat gacgacaaac ccagtgccaa
      301 ttcgcccgtc gccgacctcg tgcgcgccta ccagattaaa tcggaaaacg tcgtcgccca
      361 tatccgcaaa gcatcgcaag gacaaacctc gctggcgaac acccatccct ttatgcgcga
      421 aatgtggggt ggctactggc tgtttgccca caacgggcat ttgattgatt ttttccccga
      481 acagggcgaa tttttccacc ccgtcggcac aaccgattcc gaacgcgcgt tctgccacat
      541 cctcaaccgc ctgcgcaccc gctttgccgc ccgtcccgac gacgacacgc tgtttgacgc
      601 gattgcgggg ctgacgcacg aaatccgcaa gttcgggctg tttaacttta tgctttcaga
      661 cggcattgcc ctgtttgccc acgccagcac actgctgcac tacatcgtcc gccaagcccc
      721 gttcggcaag gcgcgcctgc tcgacgacga cgtgatggtc gattttgccg aagtaaccac
      781 gccctccgac cgcgtcgccg ttatcgccac cctgccgctg acccgcgacg aatcatggtc
      841 ccaacttgcc gtggacgaac tggtcatgtt ccgcgaaggc aacatcgtcc gacacgaccg
      901 tcccgaaaac cccgtttata tgagtgtcga agaaggtttg gaaaccgcgc gcgccgccgg
      961 cgtcgccgtc tgaacttcag acgacatagg aggacgaacc cgatgaaatg cccgttttgc
     1021 gcccaccccg acacccgcgt tgccgattcg cgcctgatgg acgaacgcaa cgccgtccgc
     1081 cgccgccgat actgccccaa ctgcggcaaa cgcttcggca cgctcgaaac cgccgaactc
     1141 aaaatgcccg ccgtcatcgg tccggacaaa aaacgttcgc cctttaatgc acaacgcctc
     1201 cgcaacgacc tgaccgccgc cgcccgaaaa tccgccctga cacccgaaca gatcgacgaa
     1261 accgtccgcc tgacggaaca caggctctac acttcgggtc agcgcgacat cccctctgcc
     1321 gcacttgccg acatggtgct aaaagaactg ctccgacaag atacggaagc cgccgtccgt
     1381 ttcgccgccc tgcacaaacg cttcgacaat ccggcagact ttgcctcgtg gctggcgcaa
     1441 gccgtcaaaa cagaccgcaa agcctgattc ccccaaccca tactgatacg gtatccccat
     1501 gttttccgaa acagatattt ctatgatgca aaacgccctc aaacttgccg ctttggggcg
     1561 tttttccact tcgcccaatc cgcgcgtcgg ctgcgttatc gcacaaggca gccaaattgt
     1621 cggacagggc ttccacgtca aagcgggcga accgcacgcc gaagtccacg ccctgcgtca
     1681 ggcgggcgaa atggcacaag gcgcgaccgc ctttgttacc ctcgaaccgt gcagccatta
     1741 cggacgcaca ccgccctgcg ccgaagctct gctccgttcc ggcgtaacac gcgtcgttgc
     1801 cgccatgcgc gaccccaacc cgctggttgc aggcaaaggg cttgccctgc tcgaagcagc
     1861 aggcatcaag acggaatgcg gtttactcga acatcaggca agggaactca accgaggctt
     1921 cctgtcgcgc atcgaacgcc gccgcccctt cgtccgcctc aaatgcgccg tttcgctgga
     1981 cggcaaaacc gccctttcag acggcagcag cttttggatt accggcgaag acgcgcgtgc
     2041 cgacgtacag gttttgcgtg ccgaaagctg cgcggtgctg accggcatcg gcacggtgtt
     2101 ggcggacaat ccccggctca acgtccgcgc ttttccaact ttgcgccaac ccgcacgcat
     2161 cgtgttagac agccgcctgc gcctgccctt ggacagccac cttctgaccg acggacaatc
     2221 tccaacctac atcgccacct tggaacgcga tgaagacaaa ctccgcccct atcgggaaca
     2281 cgcacatatc cgcatcctga tgccgtctga aacggcagac ggcaaaatcg acctgcaccg
     2341 cctgatgcgc ctccttgccg acgaaggata cggcgaagta atggtggaag ccggcgcgaa
     2401 actcacatcc gcctttttgg cggaagattt ggcggacgaa atcgtgctgt accgttcgcc
     2461 caaaatcctc ggcagcggca aagacctgtt ttccctgccc gaaaaccgcg ccgccctttc
     2521 cgcaccgccc ttatggacac ccgtttccac cgaaatcctc ggacacgacg tcaaaaccgt
     2581 attccggaaa aacggcaacg ccttttaaag ggtttgccgc cgtttcacta tataataacg
     2641 ccgtcaaatt ccgatcaaaa aaggcttcag acggcaccgg cggcatcccg cctccgcccg
     2701 gacatcaaaa atggacacaa aagaaatcct cggctacgcg gcaggctcga tcggcagcgc
     2761 ggttttagcc gtcatcatcc tgccgctgct gtcgtggtat ttccctgccg acgacatcgg
     2821 gcgcatcgtg ctgatgcaga cggcggcggg actgactgtg tcggtattgt gcctcgggct
     2881 ggatcaggca tacgtccgcg aatactatgc cgccgccgac aaagacattt tgttcaaaac
     2941 cctgttcctg ccgccgctgc tgtctgccgc cgcgatagcc gccctgctgc tttcccgccc
     3001 gtccctgccg tctgaaatcc tgttttcgct cgacgatgcc gccgccggca tcgggctggt
     3061 gctgtttgaa ctgagcttcc tgcccatccg ctttctctta ctggttttgc gtatggaagg
     3121 acgcgccctt gccttttcgt ccgcgcaact cgtgcccaag ctcgccatcc tgctgctgct
     3181 gctgacggtc gggctgctgc actttccggc gaacaccgcc gtcctgaccg ccgtttacgc
     3241 gctggcaaac cttgccgccg ccgccttttt gctgtttcaa aaccgatgcc gtctgaaggc
     3301 cgtccggcgc gcaccgtttt catccgccgt cctgcatcgc ggcctgcgct acggcatacc
     3361 gatcgcacta agcagcatcg cctattgggg gctggcatcc gccgaccgtt tgttcctgaa
     3421 aaaatatgcc ggcctagaac agctcggcgt ttattcgatg ggtatttcgt tcggcggagc
     3481 ggcattattg ttccaaagca tcttttcaac ggtctggaca ccgtatattt tccgcgcaat
     3541 cgaagcaaac gccccgcccg cccgcctctc ggcaacggca gaatccgccg ccgccctgct
     3601 tgcctccgcc ctctgcctga ccggcatttt ctcgcccctc gcctccctcc tgctgccgga
     3661 aaactacgcc gccgtccggt ttatcgtcgt atcgtgtatg ctgccgccgc tgttttgcac
     3721 gctggtagaa atcagcggca tcggtttgaa cgtcgtccga aaaacacgcc cgatcgcgct
     3781 cgccaccttg ggcgcgctgg cggcaaacct gctgctgctg gggcttgccg taccgtccgg
     3841 cggcgcgcgc ggcgcggcgg ttgcctgtgc cgcctcattt tggctgtttt ttgttttcaa
     3901 gaccgaaagc tcctgccgcc tgtggcagcc gctcaaacgc ctgccgcttt atatgcacac
     3961 attgttctgc ctggcctcct cggcggccta cacctgcttc ggcacgccgg caaactaccc
     4021 cctgtttgcc ggcgtatggg cggcatatct ggcaggctgc atcctgcgcc accggaaaga
     4081 tttgcacaaa ctgtttcatt atttgaaaaa acaagggttt ccattatgaa aatcatcctg
     4141 accacttcta tggcaggctt gggcggcacg gaaaccgcca ccgtccgcct cgggcggcta
     4201 ctcaaacggc gcgggcacga cgtcatcctt gcttcttcgg acgggccttt tgtcggagaa
     4261 gcgcaagcat cgggcatccg ttggcagccg gttgattttt accggggcgg gcttgccggc
     4321 tacctcaaaa gcacctttac ctacgcccgg atgctgcgcc gcgaacaacc cgacatcatc
     4381 gactgtcaaa tggcgcgcgt cgttcccgcc tgcgcccttg ccgccaaaat cgtttcgccg
     4441 aaaaccaaaa tcatctacca ctcgcacggt ttggacgcgg caacctaccc caaaatcgcc
     4501 aaactcttcg acaagttggg cgtgtacatc atcggcaact gcaaacacga gcgcgaaaaa
     4561 ctcatccgcc acggcttccc cgccggccgg attgcctacg cctacaacgc
//
LOCUS       DAWITQ010000157         4490 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.157, whole genome shotgun sequence.
ACCESSION   DAWITQ010000157 DAWITQ010000000
VERSION     DAWITQ010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4490)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4490)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4490
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.157"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(102..1040)
                     /locus_tag="WIX18_001841"
     CDS             complement(102..1040)
                     /locus_tag="WIX18_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ5238904.1"
                     /translation="MLELNGLCKRFGGKTVADDICLTVGRGKILAVLGRSGCGKSTLL
                     NMIAGIIRPDGGEIRLNGENITRMPPEKRRISLMFQDYALFPHMSALENAAFGLKMQK
                     MPKAEAERLAMAALAEVGLENEVHRKPEKLSGGEKQRLALARALVVRPSLLLLDESFS
                     SLDTHLRDRLRRMTAERIRNGGIPAVLVTHSPEEACTTADEIAVMHEGRILQYGTPET
                     LVQTPAGVQVARLMGLPNTDDDRHIPQNAVRFDQDGMECRVLSRTCLPESFSLSVLHP
                     EHGILWLNLDMRHAGAVSGKDTVRIHIEEREIVRFR"
     gene            complement(1049..1924)
                     /locus_tag="WIX18_001842"
     CDS             complement(1049..1924)
                     /locus_tag="WIX18_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEZ5238905.1"
                     /translation="MPTVRFTESVSKHDLDALFEWAKASYGAESCWKTLYLNGLPLGN
                     LSPEWAERVQKDWEAGCSESSDGIFLNADGWSDMGRRLQHLARTWNKAGLLHGWRNEC
                     FDLTDGGGNILFSLERAAFRPFGLLSRAVHLNGLTESDGRWHFWIGRRSPHKAVDPDK
                     LDNIAAGGVSSGELPSEAVCRESSEEAGLDQTLFPLIRPVSQLHSLRPVSRGVHNEIL
                     YVFDAVLPETFLPENQDGEVTCFEKMDIGSLVAAMLSENMMHDAQLVTLDAFCRYGLI
                     DVAHPLSEWLDGIRL"
     gene            complement(2106..2182)
                     /locus_tag="WIX18_001843"
     tRNA            complement(2106..2182)
                     /locus_tag="WIX18_001843"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2146..2148),aa:Met,seq:cat)
     regulatory      2332..2431
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            2523..4424
                     /gene="thiC"
                     /locus_tag="WIX18_001844"
     CDS             2523..4424
                     /gene="thiC"
                     /locus_tag="WIX18_001844"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HEZ5238906.1"
                     /translation="MTTPKKTAKTSGNEARELADLSEDIGIRFKYPNSERVYLQGSRG
                     DIRVPLREIRQDDTYTAQGTEANPPIPVYDTSGVYGDPAAHINLKQGLPHIRTAWLDE
                     RGDTEILPKLSSEYGTERAHDPKTAHLRFNQITRPRRAKSGSNVTQLHYARQGIITPE
                     MEFVAIRERLKLDELSQKSEYAKLLKQHAGQSFGANIPTRPDQITPEFVRQEIAAGRA
                     IIPANINHPELEPMIIGRNFRVKINGNLGNSAVTSSLTEEVEKMVWSLRWGADTIMDL
                     STGAHIHETREWIIRNAPVPIGTVPIYQALEKTGGIAEDLTWDLFRDTLIEQAEQGVD
                     YFTIHAGVLLRYVPMTANRLTGIVSRGGSIMAKWCLAHHRENFLYTHFDEICEIMKAY
                     DVSFSLGDGLRPGCIADANDESQFAELHTLGELTDKAWKHDVQVMIEGPGHVPLQRVK
                     ENMTEELQHCFEAPFYTLGPLVTDIAPGYDHITSGIGAANIGWYGTAMLCYVTPKEHL
                     GLPDKEDVRTGIITYKLAAHAADLAKGWPGAQLRDNALSKARFEFRWRDQFRLSLDPE
                     RAESFHDETLPAEGAKIAHFCSMCGPKFCSMKITQEVRDYADKQKAQRQGMEEKAVEF
                     VKKGAKIYS"
BASE COUNT         1089 a         1304 c         1170 g          927 t
ORIGIN      
        1 gttgtttcgg ataaattttg cagccctgat aaaaaatatg gctgctttgg taaaaaatgc
       61 cgtctgaaag gttttcagac ggcatttgtt tttaagaagc atcagcggaa gcggacgatt
      121 tcccgttctt cgatatggat gcgtaccgta tccttgcccg ataccgcccc ggcgtgccgc
      181 atatcgaggt tcagccacag gatgccgtgt tccggatgga ggacggacag gctgaacgat
      241 tcgggcaaac aggtacggga taatacgcgg cactccatgc cgtcttggtc gaaacgcacc
      301 gcattttgcg ggatatggcg gtcatcgtcg gtgttgggca gccccatcag acgggcgacc
      361 tgcacgccgg caggcgtttg aaccaaggtt tcgggtgtgc cgtattgtag aatcctccct
      421 tcatgcatca cggcgatttc gtctgccgtc gtacaggctt cttcgggcga atgcgttacc
      481 aaaacggcag ggatgccgcc gtttcggata cgttcggcag tcatgcggcg cagccggtcg
      541 cgcaaatgcg tgtccaaact ggaaaacgat tcgtccaaca gcagcaggga agggcggaca
      601 accaaagcgc gcgccagtgc caaccgttgc ttctcgcccc cggaaagttt ttcaggcttg
      661 cggtgcacct cgttttccag tccgacttcg gcaagtgccg ccatggcaag gcgttcggct
      721 tcggctttcg gcattttttg cattttcaaa ccgaatgccg cattttccag cgcactcata
      781 tggggaaaca gcgcgtaatc ttgaaacatc agcgaaatac ggcgtttttc gggcggcata
      841 cgggtaatgt tttccccgtt cagccgaatt tcgccgccgt ccggacggat aatccccgca
      901 atcatattca gcagtgttga ttttccgcag cccgaccgcc ccaaaacggc gagtattttg
      961 ccgcgcccga cagtcaggca gatatcgtcg gcaaccgttt tgccgccgaa gcgtttgcag
     1021 agtccgttca gttcaagcat ggcgcatcct ataaacgtat gccgtccagc cactcggaca
     1081 gcggatgggc gacatcaatc agaccgtaac ggcaaaacgc gtccagcgta accagttgcg
     1141 cgtcgtgcat catgttttcc gacaacatgg cggcaaccag gctgccgatg tccattttct
     1201 caaaacacgt aacctcgccg tcctgatttt caggcaggaa ggtttcgggc aggacggcat
     1261 cgaacacata caggatttca ttgtgcacac cccggctgac ggggcgcagg ctgtgcagct
     1321 gcgataccgg gcggatgagc ggaaacagcg tttgatccaa acccgcttct tcgctgcttt
     1381 cgcgacacac ggcttcagac ggcaattcac cgctggaaac accgccggcg gcaatattgt
     1441 cgagtttgtc gggatcgact gctttgtgcg gactgcgcct gcctatccaa aaatgccatc
     1501 tgccatccga ttcagtcaga ccgttgagat ggacggcgcg gctgagcagt ccgaacggac
     1561 ggaaagcggc gcgttcgagt gagaacaaga tattgccgcc gccgtcggtc aggtcgaaac
     1621 actcgttgcg ccatccgtga agcagccccg ccttgttcca tgtgcgggcg aggtgctgca
     1681 agcgtctgcc catatctgac cagccgtccg cattcagaaa aatgccgtct gaagactccg
     1741 agcagcctgc ctcccagtct ttctgaacgc gctccgccca ttccggcgac aggtttccca
     1801 aaggcaggcc gttcagatac agcgttttcc agcaactttc cgcaccgtaa cttgcctttg
     1861 cccactcgaa tagggcatca aggtcgtgtt tgctgacgga ttcggtaaaa cggacggtcg
     1921 gcatagtcgg ctttcttgaa cataatgcgg aagattgtaa tcaaaccgcc tgaatttgca
     1981 actgcaaaca gacggcgggc tgccgttccg atattgcggc aggaaggaaa atccggcaaa
     2041 aaacggaggc ggcaggaaac aggcaaaaca aaacccctcg gcattgaacc gaggggtttg
     2101 atatttggtt gcgggagcag gattcgaacc tacgaccttc gggttatgag cccgacgagc
     2161 taccatgctg ctccatcccg cgtcagaaga tgagactata cggcagattt tttatgttgt
     2221 caaacattac ttccgcgaaa aatcataaaa ttttgccgtc cggcggttta tgcctgattc
     2281 gacatattat tttctttaca aaagttcatg ttcgtgattt aattttggtt aacatcgaaa
     2341 caggggtgct gcctgatgtt caggcggctg agaaataccc tttacacccg atcgggataa
     2401 tacctgcgtg gggagttttc acggattctg tctttcagac ggcattggtt ttcaaatgcc
     2461 gtctgaaaac gcaaaacgct cctgtttctt tattctaaac gagaaaacag gagcattttt
     2521 ttatgactac gccaaaaaaa accgccaaaa cttccggcaa cgaagcgcgc gagcttgccg
     2581 acttgagcga agacatcggc atccgcttca aatatccgaa ctcggaacgc gtgtatctgc
     2641 aaggcagccg tggcgacatc cgcgtgcctt tgcgcgaaat ccgtcaggac gacacctata
     2701 cggcgcaagg tacggaagcc aatccgccga ttcccgtcta tgacaccagc ggcgtgtacg
     2761 gcgatccggc ggcacacatc aatttaaaac aaggtctgcc ccacatccgc acggcgtggc
     2821 tggacgaacg cggcgatacc gaaatcctgc ccaaactctc cagcgaatac ggcaccgaac
     2881 gcgcacacga tccgaaaacc gcccatctgc gtttcaacca aatcacccgc ccgcgccgcg
     2941 cgaaaagcgg cagcaacgta acccagcttc actacgcgcg ccaaggcatt atcacgcccg
     3001 aaatggagtt tgtcgccata cgcgaacgtt taaaattaga cgaattgtcc caaaaatcgg
     3061 aatacgccaa actcttgaaa caacacgcag ggcaaagttt cggcgcgaac atcccaaccc
     3121 gtcccgacca aatcacgccc gaattcgtgc gccaagaaat cgccgccgga cgcgcgatta
     3181 tccccgccaa catcaaccac cccgaactcg aaccgatgat tatcggccgc aacttccgtg
     3241 tcaaaatcaa cggcaacttg ggcaattccg ccgtcacttc cagcctgacc gaagaagtcg
     3301 aaaaaatggt gtggtcgctg cgttggggcg cggacacaat tatggactta tccacaggcg
     3361 cgcacatcca tgaaacgcgc gaatggatta tccgcaacgc gcccgtcccc atcggcaccg
     3421 tgcccatcta tcaggctttg gaaaaaaccg gcggcattgc cgaagatttg acttgggatt
     3481 tgttccgcga caccttaatc gagcaggcgg agcaaggcgt ggactatttc accatacacg
     3541 cgggcgtgtt gctgcgttat gtgccgatga ccgccaaccg cctcaccggc atcgtctcgc
     3601 gcggcggttc gattatggcg aaatggtgtt tggcacatca tcgggaaaat ttcctctaca
     3661 cgcatttcga cgaaatctgc gaaattatga aagcgtatga cgtatcgttc agcctcggcg
     3721 acggcctgcg ccccggctgc attgccgatg ccaacgacga atcccaattc gccgaactgc
     3781 acaccttggg cgaattgacc gataaagcgt ggaaacatga cgtacaagtc atgatcgaag
     3841 gccccggcca tgtgccgctg caacgcgtca aagaaaacat gaccgaagag ctgcaacact
     3901 gctttgaagc acctttttac acgctcggcc cgctcgttac cgacatcgca cccggctacg
     3961 accacatcac ctcgggcata ggcgcggcca atatcggctg gtacggcacg gcgatgcttt
     4021 gttacgttac ccccaaagaa catttggggc tgcccgacaa agaagacgtg cgcaccggca
     4081 tcatcaccta caaactcgcc gcccacgccg ccgatctcgc caaaggctgg ccgggcgcac
     4141 aattacgtga caacgccctg agcaaggcgc gtttcgagtt ccgctggcgc gaccaattcc
     4201 gcttaagcct cgaccctgaa cgtgccgaaa gcttccacga cgaaaccctg cccgccgaag
     4261 gcgcgaaaat cgcccacttc tgctcgatgt gcggccccaa attctgctcg atgaaaatca
     4321 cgcaggaagt gcgcgactac gccgacaagc aaaaagccca acggcagggc atggaggaaa
     4381 aagcggtcga gttcgtcaaa aaaggcgcga agatttacag ttgaaacgtc aagcaaaaaa
     4441 tgccgtctga aacccggaaa aaaggcttca gacggcattc tttcgcttgt
//
LOCUS       DAWITQ010000158         4480 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.158, whole genome shotgun sequence.
ACCESSION   DAWITQ010000158 DAWITQ010000000
VERSION     DAWITQ010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4480)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4480)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4480
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.158"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..819
                     /locus_tag="WIX18_001845"
     CDS             <1..819
                     /locus_tag="WIX18_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
                     /protein_id="HEZ5238907.1"
                     /translation="ATANKGKCQDGAIGAAVGEIVGEALVKNTDFSDMTPEQLDLEVK
                     KITAYAKLAAGTVAGVTGGDVNTAAQTAQNAVENNAVKAVVTAAKVVYKVARKGLKNG
                     KINVRDLKQTLKDEGYNLADNLTTLFDETLDWNDAKAVIDIVVGTELNRANKGEAAQK
                     VKEVLEKNRPYIPNKGAVPNMSTYMKNNPFGKQLAQISEKTTLPTQQGQSVFLVKRNQ
                     GLLKTGDRFYLDGQHKNHLEVFDKNGNFKFVLNMDGSLNQMKTGAAKGRKLNLK"
     gene            828..1205
                     /locus_tag="WIX18_001846"
     CDS             828..1205
                     /locus_tag="WIX18_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238908.1"
                     /translation="METLNDIKKILINVGLYQGFDLTDPKVSEEVNHETANMKWIKDY
                     TSDGNWDNEFKEDLKNFLDYMEVCQLALNDKNFKIASNSLFMAMIYAGNLSLIFDSIK
                     TDISTLLSAEYKKNSFSWPSLDE"
     gene            1483..1857
                     /locus_tag="WIX18_001847"
     CDS             1483..1857
                     /locus_tag="WIX18_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238909.1"
                     /translation="MKNFNVVKESLRELGIKQGFDLYEKATTEKLNSEDPLDLQWLSN
                     YSSDWNDELEEDFDSFFQHMKEYQYAIDNEDIKSACSSLCEAMLYVGNIKNFFEFLKS
                     DMIRLLRGESKTTDFQWPQFDE"
     gene            1892..3697
                     /locus_tag="WIX18_001848"
     CDS             1892..3697
                     /locus_tag="WIX18_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HEZ5238910.1"
                     /translation="MRKVCASARTRSMIYGSMPSEKLTIFQTAFVMQVNIQIPYILPR
                     CVRAEDTPYACYLKQLQVTKDVNWNQVQLAYDKWDYKQEGLTGAGAAIIALAVTVVTA
                     GAGAGAALGLNGAAAAATDAAFASLASQASVSLINNKGNIGNTLKELGRSSTVKNLMV
                     AVATAGVADKIGASALNNVSDKQWINNLTVNLANAGSAALINTAVNGGSLKDNLEANI
                     LAALVNTAHGEAASKIKQLDQHYITHKIAHAIAGCAAAAANKGKCQDGAIGAAVGEIV
                     GEALVKNTDFSRMSATEIEKAKAKITAYSKLVAGTASAVVGGDVNTAANAATVAVENN
                     TLYPRCVGAKCDEFQKEQQKWIRENPEEYREVLLLQTGFIPIIGDIQSFVQAQTAADH
                     LFALLGVVPGIGESIQAYKVAKAAKNLQGMKKALDKAATVATAQGYVSKTKIKIGQTE
                     LRVTAATDKQLLKAIGEGRDTTGKMTEQLFDSLAKQNGFRVLSGGKYGGNNGFDHVWQ
                     AADGSVVLIVESKQIRNGTVQLNPNGAGGYTQMSREWIKQVVKSLPDGSPAKAVVLKA
                     NQNGKLKTAIAGVDRQTGKAVILSVKVPSKTNIRR"
     gene            3700..>4480
                     /locus_tag="WIX18_001849"
     CDS             3700..>4480
                     /locus_tag="WIX18_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 49 family protein"
                     /protein_id="HEZ5238911.1"
                     /translation="MGHNMMTTQKWYEHITNVIIGNTANFNSGCPESIDYVDEKKGVP
                     LAAMKYILMYTEAAASHAYLFEHDLKKFKQYAYVAGKLGILQSVDDEDPEPFFFPCDM
                     LNIQDPMFLMLMSDSPQLREFLVRNIDNIANDTEAFVNRYDLNRHMIYNTLLMVEGKQ
                     LDRLKQRSEKVLAHPTPSKWLQKRLYDYRFFLAFAEQDAEAMKAALEPLFDKKTARMA
                     AKETLSYFDFYLQPQIVTYAKIASMHGFDLGIDHEIAPRDLT"
BASE COUNT         1428 a          848 c         1067 g         1137 t
ORIGIN      
        1 gcgacggcga ataagggtaa gtgtcaggac ggtgcgattg gcgcagccgt gggtgagatt
       61 gttggggaag ctttggttaa aaataccgat tttagcgata tgaccccgga acaattagat
      121 ctggaagtta agaaaattac cgcctatgcc aaacttgcgg caggtacagt tgcaggcgta
      181 acgggaggag atgtcaatac tgctgcacaa accgcacaaa acgcggtaga aaataatgcg
      241 gttaaagctg ttgtaactgc tgcaaaagtg gtttataagg tagccagaaa aggattaaaa
      301 aacgggaaaa tcaacgttag agatttaaaa cagacgttga aagacgaagg ttataattta
      361 gccgacaacc tgaccacctt attcgacgaa acattggatt ggaacgatgc caaagccgtt
      421 attgatattg tcgtcggaac agagctgaat cgcgctaata aaggggaagc ggcacaaaag
      481 gtcaaggaag ttttagaaaa aaatcgtcct tatatcccta ataaaggtgc tgtaccgaat
      541 atgagtacat acatgaaaaa taatcctttt ggaaaacagc tggctcaaat ttcagaaaag
      601 acaacgcttc cgacgcagca agggcagtct gtcttcttgg taaaaagaaa ccaagggtta
      661 ttaaaaaccg gtgataggtt ttatttagat ggccaacata aaaatcattt agaggttttt
      721 gataaaaatg ggaactttaa gtttgttcta aatatggatg gttcgcttaa ccaaatgaaa
      781 actggggcag caaaaggtcg taaattaaac ttaaaatagg aaattttatg gaaacattga
      841 atgatataaa aaaaatcttg attaatgtgg ggctttatca agggtttgat ttgacagatc
      901 caaaagtatc agaagaagtt aatcatgaaa cagctaatat gaaatggatt aaagattata
      961 cttcagacgg gaattgggat aatgaattta aggaggattt aaaaaacttt ttagattata
     1021 tggaagtatg ccaattagcc ctaaacgata aaaatttcaa aattgccagt aattctttat
     1081 ttatggctat gatttacgca ggtaatctat ctcttatatt tgattcaata aaaactgata
     1141 tatcaacatt attgagtgct gagtataaaa agaatagttt ttcatggcca tctcttgatg
     1201 aatagaaagc aagttgtagc ctgcatgaaa tctaaaaccc atgcataagg tgtgggcttc
     1261 agtatacgcg ttccatgatt tacggccata tgccgtctga aaagctcaat tttttcagac
     1321 ggcatttgtt atgaaagtaa atatttagat tccctgtata ctgtttagac tcgtgtgtgc
     1381 tgagtaagct gtagtctgca tgaaacctaa aactcgctca aaattaagct aagacattag
     1441 cagggcaagg gcgaaaattg aatcttaaat aaggtgattc agatgaaaaa ttttaatgta
     1501 gtaaaagaaa gtttaagaga gttaggaatt aaacaaggat ttgatcttta tgagaaagcc
     1561 acaactgaaa aattgaatag tgaagatcct cttgacttac aatggctttc taactattca
     1621 tctgattgga atgatgaatt agaagaagac tttgattctt tttttcagca tatgaaggaa
     1681 tatcaatatg ctattgacaa tgaagacatt aaatctgcat gtagttcact atgtgaagct
     1741 atgctctatg ttggtaatat taaaaatttt tttgagtttc tcaaaagcga tatgattaga
     1801 ctgttgagag gtgaaagtaa aacaacagac tttcaatggc cgcaatttga tgaatagcag
     1861 caagctgtag cctgcatgaa acctaaaatc catgcgtaag gtgtgtgctt cagcacgcac
     1921 gcgttccatg atttacggct caatgccgtc tgaaaagctc acaatttttc agacggcatt
     1981 tgttatgcaa gtaaatattc agattcccta tatactgccc agatgcgtgc gtgctgaaga
     2041 caccccctac gcttgctatt tgaaacagct ccaagtcacc aaagacgtca actggaacca
     2101 ggtacaactg gcgtacgaca aatgggacta taaacaggaa ggcttaaccg gagccggagc
     2161 agcgattatt gcgctggctg ttaccgtggt tactgcgggc gcgggagccg gagccgcact
     2221 gggcttaaac ggcgcggccg cagcggcaac cgatgccgca ttcgcctcgc tggccagcca
     2281 ggcttccgta tcgctcatca acaacaaagg caatatcggt aacaccctga aagagctggg
     2341 cagaagcagc acggtgaaaa atctgatggt tgccgtcgct accgcaggcg tagccgacaa
     2401 aatcggtgct tcggcactga acaatgtcag cgataagcag tggatcaaca acctgaccgt
     2461 caacctggcc aatgcgggca gtgccgcact gattaatacc gctgtcaacg gcggcagcct
     2521 gaaagacaat ctggaagcga atatccttgc ggctttggtg aatactgcgc atggagaagc
     2581 agccagtaaa atcaaacagt tggatcagca ctacattacc cacaagattg cccatgccat
     2641 agcgggctgt gcggcagcgg cggcgaataa gggcaagtgt caagatggcg cgataggcgc
     2701 tgcagtcggt gagattgttg gtgaggcttt ggttaagaat actgatttca gtcgtatgag
     2761 tgcgaccgaa atcgaaaaag ctaaagcgaa gattactgcc tattcaaaac tggttgccgg
     2821 cactgcgtct gccgttgtag gcggggatgt gaatacagcg gcgaatgcgg ctactgtggc
     2881 ggtggagaat aatactttgt atcctagatg cgttggtgca aagtgtgatg aatttcaaaa
     2941 ggaacaacaa aaatggatac gtgaaaatcc tgaagaatat cgagaagttt tgcttcttca
     3001 gacaggattt attccaatta tcggtgatat acagagtttt gtacaagcac agaccgctgc
     3061 cgatcacctg tttgctttgc tgggtgtggt tccgggtatc ggtgaatcga tacaggccta
     3121 taaagtagcg aaagcggcaa aaaatttaca aggcatgaaa aaagccttgg acaaggcagc
     3181 aaccgttgcc actgcacagg gctatgtcag taaaaccaaa atcaaaatcg gtcaaactga
     3241 attaagggtt actgcagcaa ctgacaaaca attgctgaaa gctattggcg aaggaaggga
     3301 cacgacaggt aaaatgaccg agcagttatt tgactcttta gctaaacaaa atggcttcag
     3361 agtgctttcg ggcggcaaat acggcggaaa taacggtttt gatcatgtat ggcaggctgc
     3421 cgatggtagt gttgttttga ttgtagaaag taagcagatt aggaacggta cggtacagct
     3481 gaatccgaat ggtgcgggtg gatatacgca gatgagtcgt gaatggatta aacaagttgt
     3541 aaaaagttta cctgatggta gtcctgctaa ggcagttgtc ttaaaagcaa atcagaacgg
     3601 caaattaaaa acggcaatag caggcgttga tcgtcaaaca ggtaaggccg ttattctttc
     3661 tgtcaaagtt ccttctaaaa ccaatataag gagataacaa tggggcacaa tatgatgacc
     3721 acccaaaaat ggtatgaaca tattactaat gtaatcatag gcaatactgc taatttcaat
     3781 agcggttgcc ccgaatctat agattatgta gatgaaaaaa aaggcgtgcc gcttgcagcg
     3841 atgaaataca ttttaatgta cactgaagct gcggcttccc atgcctatct atttgaacat
     3901 gatcttaaga aattcaagca atatgcttat gttgcaggaa agttgggtat tttgcagagt
     3961 gtagatgatg aagaccccga acccttcttc tttccctgcg acatgctcaa cattcaagat
     4021 ccgatgtttc tgatgctgat gagcgacagc ccgcagctgc gcgagttttt ggtgcgcaat
     4081 atcgacaaca tcgccaacga tacagaagcc ttcgtaaacc gatacgacct caaccgtcat
     4141 atgatttaca atactctgct gatggtggag ggtaagcagc ttgatcggtt gaaacaacgt
     4201 agcgagaaag tcttggcgca tcccacccct agcaaatggc tgcaaaagcg gttgtacgat
     4261 taccgcttct tcctcgcttt cgccgaacag gatgccgagg cgatgaaggc cgccttagag
     4321 ccgctttttg ataaaaaaac cgcgcgtatg gctgccaaag aaacattgtc ctatttcgat
     4381 ttctacctgc agccgcaaat cgttacctac gccaaaatcg catccatgca cggtttcgat
     4441 ttgggcatag accacgaaat cgcgccgagg gatttgactg
//
LOCUS       DAWITQ010000159         4373 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.159, whole genome shotgun sequence.
ACCESSION   DAWITQ010000159 DAWITQ010000000
VERSION     DAWITQ010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4373)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4373)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4373
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.159"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(69..2045)
                     /locus_tag="WIX18_001850"
     CDS             complement(69..2045)
                     /locus_tag="WIX18_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEZ5238912.1"
                     /translation="MNEFSLAPIVVVLLVSVITVILCRKFNIPSMLGYLLVGFLAGPG
                     MLSLIPKSHATDYLGEIGIVFLMFSIGLEFSLPKLRAMRRLVFGLGGLQVGVTMLSVM
                     GILMLTGVPFNWAFAVSGALAMSSTAIVSRILSEKTELGQPHGQMAMGVLLMQDIAVV
                     PLMILIPALAGGGDGNIWAALGLAFAKMLLTLGLLFFVGSKIMSRWFRMVAKRKSSEL
                     FMINVLLVTLGVAYLTELEGLSMALGAFVAGMLLSETEYRFQVEDDIRPFRDILLGFF
                     FITVGMKLDIQALIGGWRQVLMLLAMLLVLKALVVFAIAFKMKHSVGDSLKTALYLAQ
                     GGEFGFVMLAIAGQLDMVSPEWEQAATAAVLLSMIIAPFLLGGSDALVGRLVKSSWDM
                     KSLDLHSMLVETMSKSDHVLIVGFGRGGQTVGRVLAQEDIPYFALDLDIARVQVARSA
                     GEPVSFGDAKRREVLEAAGLGRAKMVVLTLNNMHETQHVLDNVLSMYPNMPVYVRATN
                     DDYVKTFTDIGAEEAVSDTKETGLVLAGYAMLGNGASYRHVYQTMANIRHSRYAALEG
                     LFVGSDDEAGFGENGETVRHAFPLAAEAYAVGKTVGTLPMAAYGIKLLFVRRRTGRIE
                     NPDASFTLEGGDVLVVAGKKEEIISFENWSLQGI"
     gene            2194..3033
                     /locus_tag="WIX18_001851"
     CDS             2194..3033
                     /locus_tag="WIX18_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit B"
                     /protein_id="HEZ5238913.1"
                     /translation="MTATAAAIDRLLPQTQCRECGYDGCLPYAQAVATGEAYNLCAPG
                     GEAVIRDISALLGKPLVAPAKTQAKALARIDETACIGCTACIRACPADAIMGAGKLMH
                     TVIADECTGCGLCVAPCPVDCIHMQPVADTVLPRARRFSLSADSRFAAAEHARARYLK
                     RNERKQREADERKAMLAEREAAVRNARPQTPDTPKKPAFNPADLIAKAMAKAQTQQDR
                     LAAADNRKDYQAKQIAEARERAELRRAQRDMKYGSDSEKAAALEYLKQYKAKQEAAQN
                     TAS"
     gene            3234..4265
                     /gene="gap"
                     /locus_tag="WIX18_001852"
     CDS             3234..4265
                     /gene="gap"
                     /locus_tag="WIX18_001852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEZ5238914.1"
                     /translation="MGIKVAINGYGRIGRQVLRAIYDYQIQDQLQIVAVNASGSLETN
                     AHLTKFDTVHGRFEADVSHDGGNLIVNGDKIPFFSTRNPAELPWKELGVDLVMECTGA
                     FTSKEKAKVHLESGAKKVLISAPGGDDVDATVVYGVNDSILTADMTVVSNASCTTNCL
                     SPVAKVLSESVGIVKGAMTTIHALTNDQTVTDVRHKDLRRARSGVENMIPTKTGAAKA
                     VGLVLPELKDKLDGLAIRVPTVNVSLVDLNFQAARDTTIEEINALMKAASEAGALKGV
                     LGYNTLPLVSMDFNHTTEASHFDATLTKVVDGNMIKVFAWYDNEWGFSCQMLNTARRM
                     FGLEVRPLK"
BASE COUNT         1118 a         1466 c         1002 g          787 t
ORIGIN      
        1 tgaattttgc gaaagcgtta ttaaaccaaa taaccggaaa tggcgcaagc cttatttcgg
       61 catttcattt atattccctg caaactccag ttttcaaaag agataatttc ttcttttttg
      121 cctgcgacca ccaacacgtc accgccttcc aatgtaaacg aggcatccgg gttttcaatc
      181 cggcctgtgc ggcggcggac gaacaagagt ttgatgccgt aagccgccat cggaagcgtg
      241 ccgactgttt tgccgacggc gtatgcttct gcagccaaag gaaaggcgtg gcggacggtt
      301 tcgccatttt cgccgaatcc tgcctcatca tcactaccga caaacaaacc ctccaacgcg
      361 gcataacggc tgtggcggat atttgccatc gtctgataga cgtgccggta cgacgcgccg
      421 ttgcctaaca tcgcatagcc tgccagcacg agtccggttt ctttggtgtc cgacacggct
      481 tcttccgcac ctatatcggt aaacgttttc acataatcgt cgttggtggc gcgcacatat
      541 acgggcatat tgggatacat ggacagcaca ttgtctaaaa cgtgttgcgt ttcgtgcata
      601 ttgttgagcg tcagcaccac cattttcgcc cgccccaaac cggcggcttc caatacttcc
      661 ctgcgtttcg catcgccgaa cgacaccggt tcgcccgcac ttctggcaac ctgcacccgc
      721 gcaatgtcca agtcgagcgc gaaatacgga atatcctctt gggcaaggac gcgtccgacc
      781 gtctgcccgc ccctgccgaa gccgacaatc agcacatggt cggacttgct catggtttct
      841 accagcatac tgtgcagatc gagcgacttc atgtcccagc ttgacttgac caaacgcccg
      901 accagcgcat cgctgccgcc caagaggaag ggcgcgataa tcatcgacag cagcaccgcc
      961 gccgtcgccg cctgttccca ttctggcgaa accatatcaa gctgcccggc aatggccagc
     1021 atcacgaagc cgaactcgcc gccttgtgcg agatacaaag ccgttttgag gctgtcgccg
     1081 accgaatgtt tcattttgaa ggcaatggca aacacaacca gtgccttcaa caccagcagc
     1141 attgccaaca gcatcaatac ctgccgccag ccgccgatca atgcctgaat gtccagcttc
     1201 atgccgaccg tgataaagaa aaagccgagc aaaatatcgc ggaacgggcg gatgtcgtct
     1261 tcgacttgga aacggtattc cgtttccgaa agcagcatcc ccgccacaaa cgcgcccaac
     1321 gccatagaca aaccttccag ctcagtcaga taagccacac ccaaggttac cagcagcaca
     1381 ttgatcataa agagttcgga cgatttgcgt tttgccacca tcctgaacca tcgcgacata
     1441 attttgctgc cgacgaaaaa cagcagcccc agcgtcagca gcatttttgc aaacgccaaa
     1501 cccaaggccg cccaaatatt tccgtcccct ccgcccgcca gcgcgggaat cagaatcatc
     1561 agcggcacga cggcgatgtc ctgcatcagc agcacgccca tcgccatctg accgtgcggc
     1621 tgccccaatt ccgtcttttc cgacaaaatc cggctcacaa tcgccgtgga cgacatcgcc
     1681 aacgcgcccg acacggcaaa cgcccaattg aacggcacgc ccgtcagcat cagtatgccc
     1741 attaccgaca gcatcgtaac gccgacctgc aaaccgccca gcccgaatac cagccgcctc
     1801 atcgccctca acttgggcag cgagaactcc aaaccaatgc tgaacatcag gaacacaatc
     1861 ccgatttcac ccaaataatc cgtcgcatgg cttttcggaa tcaggctgag cataccgggc
     1921 cccgccaaaa agcccaccag caggtagccc agcatggagg gaatgttgaa cttgcggcac
     1981 aggatcaccg taatgaccga caccagcaaa acaaccacaa taggggcaag cgaaaattcg
     2041 ttcatagacc gtccgaacag gaaaatacag aaaaatgccg tctgaaacgg catacgccgc
     2101 cgtattataa caaaacaccg cgcaccatcc gaaacgggcg cggcatacaa ttctgctaaa
     2161 atacgccctt tcgattttga gccgcacacc gacatgaccg ccacagccgc cgccatagac
     2221 cgcctgcttc cccaaaccca atgccgcgaa tgcggctacg acggctgcct gccctacgca
     2281 caggcagtcg caacaggcga agcgtacaac ctctgcgccc cgggcggaga agccgtcatt
     2341 cgggacattt ccgccctgct cggcaaaccc cttgtcgcac ctgccaaaac ccaagccaaa
     2401 gcactcgccc ggatagacga aaccgcctgt atcggctgca ccgcctgcat ccgcgcctgc
     2461 cctgccgatg ccattatggg tgcgggcaaa cttatgcaca ccgtcatcgc cgacgaatgc
     2521 accggctgcg gactctgcgt cgccccctgc cccgtcgact gcatccatat gcagcccgtt
     2581 gccgacaccg tcctgccccg cgcgcgccgc ttcagcctgt ccgccgacag ccgttttgcc
     2641 gccgccgaac acgcgcgtgc gcgctacctc aaacgcaacg aacgcaaaca gcgcgaagcc
     2701 gacgaacgca aggccatgct tgccgaacgc gaagccgccg tccgcaacgc gcgtccgcaa
     2761 acacccgaca caccgaaaaa accggcgttt aaccctgccg acctcatcgc caaagccatg
     2821 gcaaaagcgc aaacccaaca agaccgcctc gccgccgccg acaaccgcaa agactatcag
     2881 gcgaaacaga tagccgaagc ccgcgaacgc gccgagttgc gccgcgccca acgcgatatg
     2941 aaatacggca gcgacagcga aaaagccgcc gccctcgaat atctcaaaca atacaaagcc
     3001 aaacaggaag ccgcacagaa taccgcctcc tgacccttcc ctgatatgcc gtctgaaaac
     3061 cgtttcagac ggcattttat caagctctcc gtccgccgca cccgtgccgt ccgcatctta
     3121 ccgcccaccc ttccggccgc gccgttttca ataaaatatt aattacacgc cactacaaat
     3181 ttgctataat ccgccccgaa aatctaccca acccctcaac aaaggaacaa accatgggca
     3241 tcaaagtcgc catcaacggc tacggacgca tcggccgcca ggttttgcgc gccatctacg
     3301 attatcagat tcaagaccaa ctccaaatcg tcgccgtcaa cgccagcggc agccttgaaa
     3361 ccaacgccca cctcaccaaa ttcgacaccg tgcacggacg ctttgaagcc gacgtatccc
     3421 acgacggcgg caacctcatc gtcaacggcg acaaaatccc cttcttctcg acccgcaacc
     3481 ctgccgaact gccgtggaaa gaactcggtg tcgatttggt catggaatgc accggcgcgt
     3541 tcaccagcaa agaaaaagcc aaagttcatc tggaaagcgg cgcgaaaaaa gtcctcattt
     3601 ccgcaccggg cggcgacgat gtcgatgcaa ccgtcgtgta cggcgtgaac gacagcatcc
     3661 tgaccgccga catgaccgtc gtttccaacg cttcctgcac caccaactgc ctctcgccgg
     3721 ttgccaaagt gttgagcgaa agcgtcggca tcgtcaaagg cgcgatgacc accatccacg
     3781 cgctgaccaa cgaccaaacc gttaccgacg tgcgccacaa agacctgcgc cgcgcccgca
     3841 gcggcgtgga aaacatgatt ccgaccaaaa ctggcgcggc aaaagccgtc ggactggtac
     3901 tgcccgaatt gaaagacaaa ctcgacgggc ttgccatccg cgtgccgacc gtcaacgtat
     3961 cattggtaga tttgaacttc caagccgcgc gcgacacgac aatcgaagaa atcaacgcac
     4021 tgatgaaagc cgcctcggaa gcaggcgcgc tcaaaggcgt tttaggctac aacaccctgc
     4081 ccttggtttc catggacttc aaccacacca ccgaagccag ccacttcgac gcaacactga
     4141 ccaaagtcgt tgacggcaac atgattaaag tcttcgcatg gtatgacaac gaatggggct
     4201 tcagctgcca aatgctgaac accgcacgcc gtatgttcgg acttgaagtg cgcccgctca
     4261 aataagcaat aaaccgtcaa acaaaatgcc gtctgaaacc cgatgttttc aagttccaga
     4321 cggcattttt catttttcac cgtgatttta cccggctgtc gtcatttcta att
//
LOCUS       DAWITQ010000160         4340 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.160, whole genome shotgun sequence.
ACCESSION   DAWITQ010000160 DAWITQ010000000
VERSION     DAWITQ010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4340)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4340)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4340
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.160"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            236..1156
                     /gene="ribF"
                     /locus_tag="WIX18_001853"
     CDS             236..1156
                     /gene="ribF"
                     /locus_tag="WIX18_001853"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEZ5238915.1"
                     /translation="MRIRLGRHNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADA
                     RGLPVVAVIFEPQPKEFFASRTGRVPPCRISPLRTKLELLEGTGCIDAVWVLRFDRHF
                     SEISAQGFIDRLLRQTLNTRYLLVGDDFRFGAGREGCFELLAQQPDMQTERTPSVIVE
                     DIRTSSTAVRQALSDGNLAYAKKLLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHR
                     YALGGVFVVEADGAFGTRRGVASFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRF
                     LHKLRDEEKFDGMAELKRQIAADMEAAKCW"
     gene            1297..4086
                     /gene="ileS"
                     /locus_tag="WIX18_001854"
     CDS             1297..4086
                     /gene="ileS"
                     /locus_tag="WIX18_001854"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HEZ5238916.1"
                     /translation="MTDYSKTVNLLESPFPMRGNLAKREPAWLKSWYEQKRYQKLREI
                     AKGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI
                     EVMVEKLHGKDMPKARFRELCREYAAEQVARQKKDFIRLGVLGDWDHPYLTMDFKTEA
                     DTVRMLGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVGYPFKDTAA
                     LATAFGLAGIEGKAFAVIWTTTPWTLPASQAVSAGADVVYQLIDTPTGKLVLAKDLAE
                     DALKRYGFSDGIAILAETTGDKLENLHMNHPFLERDIPMLNGEHVTTDAGTGLVHTAP
                     AHGLEDYAVCNKYGIELYNPVNAEGKYISETPRVAGMRVWEANPVILQWLEETGNLLA
                     SSKIEHSYAHCWRHKTPLIYRATGQWFVGMDKAGADGKTLRDKAIKAVDDTEFFPSWG
                     RARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAELLEKVAQRIEEKGIE
                     AWFSLDKSELLSAEDCEHYDKLPDTMDVWFDSGSTHYSVVKQREELEWPADLYLEGSD
                     QHRGWFQSSMLTGCASSMGRAPYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFG
                     ADILRLWAASTDYSGELAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQA
                     DMVEIDRYALVLARRLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLY
                     TTKADSRARRSAQTALYHITRSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEF
                     PTINEKTEAELVKKWTAIREAREAVTAAIEPLRADKTVGSSLQAEAEITAPEEMAGYL
                     NALGEELRFAMLVSKAEVKVGSELAVAAKASDGEKCERCWHYTRDVGAVAGYETVCKR
                     CAENVGGEGETRHYA"
BASE COUNT         1052 a         1195 c         1161 g          932 t
ORIGIN      
        1 tctcggttta cctggttaaa aaagaacgat tttcactgat gttgcatcag gtttggggcg
       61 atgtttcaac acatagcacc gcgcctgctg cgcgctttat gcgtttggcg cgttcggctg
      121 cgggaaattt gcctactttt cccgcgtcgg gcgggcgtaa cgggcggcac actgtctata
      181 aaccgcaata ccgtttacaa tgaccgcctg tttcaccaca tacccgaaca taacaatgag
      241 aatcaggctg gggcggcaca acgcgcccga ctttccgcac ggggccgccg taaccatagg
      301 caattttgac ggcgtacacc tcggacacaa acacatcctc caaaaactcc gcctcgaagc
      361 cgatgcgcgc ggcctgcccg tcgtagccgt tatcttcgag ccgcaaccca aagaattttt
      421 tgcaagccgc acgggtagag tgccgccgtg ccgcatcagc cccctgcgta ccaaactgga
      481 attgctggaa gggacgggct gcatcgatgc cgtctgggtt ttgcgtttcg accggcattt
      541 ttccgaaata tccgcgcaag ggtttatcga ccgcctgctg cgtcaaactt taaatacgcg
      601 ctatttgctc gtcggcgacg atttccgttt cggtgcgggg cgggaaggct gttttgaact
      661 tttggcacaa cagcccgata tgcagaccga gcgtacgcct tccgtcatcg tcgaagacat
      721 ccgcaccagc agtaccgccg tgcgacaagc cctttcagac ggcaaccttg cctatgcgaa
      781 aaaacttttg ggacacgact acgtcttgag cggcagggtg gtgcacggca gaaaactcgg
      841 acgcacctta aacgccccga ctgccaacat ccgcctgccc cgccaccgtt atgcactcgg
      901 cggcgtgttc gtcgtcgaag cggacggcgc attcggcacg cggcgcggcg tggcgagctt
      961 cggtttcaat cccaccgttg atagcggctg ttctcaaaag cttgaagtcc acctgttcga
     1021 ctttcaaggc gacctgtacg gacaacggct gaacgtccgc ttcctgcaca aactgcgcga
     1081 tgaagaaaag tttgatggta tggcagaact gaaaaggcag atagcagccg atatggaagc
     1141 cgcaaagtgt tggtagaaaa accttataca aaccatccga ttgggctaca atcaatcttt
     1201 taacttttca gacggcatag gggtttcccg ttgtgaaata ctgtttgagg cgcaatgccg
     1261 tctgaaccga aatattgtaa caatagagat taaaaaatga ccgattacag caaaaccgtc
     1321 aacctgctcg aaagcccgtt cccgatgcgc ggcaatcttg ccaagcgcga gcctgcatgg
     1381 ctgaaaagct ggtacgagca aaaacgctac caaaaactgc gcgaaatcgc caaaggccgt
     1441 ccgaaattca tcctgcacga cggcccgccg tatgccaacg gcgacatcca catcggtcat
     1501 gccgtcaata aaattctcaa agacatcatt atccgcagca aaacccaagc cggttttgac
     1561 gcgccttatg tgccgggttg ggactgccac ggtttgccca tcgaagtgat ggtagaaaaa
     1621 ctgcacggca aagacatgcc taaagcgcgt ttccgtgaat tgtgccgcga atatgccgcc
     1681 gaacaagttg cccgccagaa aaaagacttt atccgcttgg gcgtgttggg cgactgggac
     1741 catccttacc tgactatgga tttcaaaacc gaagccgata ccgtgcgtat gctcggcgaa
     1801 atctacaaat ccggctatct ctaccggggt gcgaaaccgg ttcaattctg cttggactgc
     1861 ggttcttcgc tggccgaagc ggaagtggaa tacaaagaca aagtatcgcc tgcgattgac
     1921 gtgggctatc cgtttaaaga caccgctgcg cttgccactg cattcggttt ggcaggtatc
     1981 gaaggcaaag cgtttgccgt tatctggaca accacgcctt ggacgctgcc ggcgagccaa
     2041 gccgtgtctg ccggtgcgga cgtggtgtat caattaatcg atacgcctac aggcaaattg
     2101 gtgctggcga aagatttggc agaagacgcg ctcaaacgtt acggtttttc agacggcatt
     2161 gctattcttg ccgaaaccac cggcgacaag ctggaaaacc tgcacatgaa tcatccgttc
     2221 ctcgagcgtg atattcccat gctcaacggc gaacacgtta ccaccgacgc cggtacgggt
     2281 ttggtacata ccgcccctgc gcatggtttg gaagactacg ctgtctgcaa taaatatggc
     2341 atcgagcttt acaaccccgt caacgccgaa ggcaaataca tcagcgaaac gccgcgcgtt
     2401 gccggtatgc gcgtttggga agccaatccc gttatcctgc aatggctgga agaaaccggc
     2461 aaccttttgg caagcagtaa aatcgaacac agctacgccc actgctggcg gcacaaaacg
     2521 ccgctgattt accgcgcgac cggtcaatgg tttgtcggta tggacaaagc cggtgccgac
     2581 ggcaaaaccc tgcgcgacaa agccatcaag gccgtggacg ataccgaatt cttcccgtct
     2641 tggggtcgcg cgcgtttgga agccatgatt gaaggtcgtc ctgactgggt ggtttcacgc
     2701 caacgctatt ggggcacgcc gatgactttc tttgttcaca aagaaacggg cgagctgcat
     2761 ccgaactctg ccgaactttt ggaaaaagtc gcgcaacgca ttgaagaaaa aggcatcgag
     2821 gcttggttct ccctcgataa aagcgaatta ttaagcgcgg aagattgcga acattacgac
     2881 aaactccccg atacgatgga cgtatggttc gattccggtt cgacccatta ttccgttgtg
     2941 aaacaacgcg aagaattgga atggccggcg gatttgtatc tcgaaggcag cgaccagcac
     3001 cggggctggt ttcaatcgtc catgctgacc ggctgcgcct catcaatggg acgcgcaccg
     3061 tataaacagc tgctgaccca cggttttgtt gtagacggcg aaggcaaaaa aatgtcgaaa
     3121 tccatcggca acgtcgtcgc gccgcaagaa gtctataacg aattcggcgc ggacatcctg
     3181 cgtctgtggg cggcatctac cgattacagc ggcgaattgg cgatttctaa agaaatcctt
     3241 aagcgcgtaa ccgaaagcta ccgccgtatc cgcaatacct tgagcttttt gtttgccaac
     3301 ttgagcgact ttaatccgat tgaagatgcc gtgcaacagg cggatatggt ggaaatcgac
     3361 cgctatgccc tggtgttggc gcgtcggctg caagagcgtc tggcaggcga ttactatccg
     3421 cgttatgcct tccattttgc cgtgaaagac attgtttctt tctgctcgga agacttgggc
     3481 gcgttctacc tcgatatcct gaaagaccgc ctctacacca ccaaagccga cagccgcgcc
     3541 cgccgcagcg cgcaaaccgc cctgtaccac atcacgcgca gcctggttct cttgattgca
     3601 ccgattttgt gctttaccgg cgaagaagcg tgggacatca tcggcggcgg cgaagaagac
     3661 agcgtcctct tccatacttg gcacgagttc ccgaccatca acgaaaaaac cgaagccgaa
     3721 ctggtgaaaa aatggacggc aatccgcgaa gcccgcgaag cggtaaccgc cgccatcgag
     3781 cctttgcgcg ccgacaaaac cgtcggttcg tccttgcaag ccgaagccga aatcaccgcg
     3841 ccggaagaaa tggccggcta cctgaacgcc ttgggcgaag aattgcgctt tgccatgctg
     3901 gtgtctaaag cagaagtgaa agtaggcagc gaacttgccg ttgccgctaa agccagtgat
     3961 ggtgaaaaat gcgaacgctg ctggcactac acccgcgatg tgggcgcggt tgcaggctat
     4021 gaaaccgtct gcaaacgctg tgcagagaat gtcggcggag aaggcgaaac gcgccattac
     4081 gcctgataaa gtttgagcaa atgccgtctg aaaccgccga acagcatttc agacggcatt
     4141 ttttgtgccg caatttgtct tcataatggc ggacgggttt caagattacg gtgttgtcgg
     4201 aatgcaactg aaccgtcatt cccacgaaag tgggaatcta gaatctcgag gtttcagtca
     4261 tttccgatag attcccgccg cgtcgtgggt ctggattccc gcctgtgcgg gaatgacgga
     4321 tttcgagatt gcggtgttgt
//
LOCUS       DAWITQ010000161         4309 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.161, whole genome shotgun sequence.
ACCESSION   DAWITQ010000161 DAWITQ010000000
VERSION     DAWITQ010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4309)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4309)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4309
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.161"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(153..2081)
                     /gene="dnaK"
                     /locus_tag="WIX18_001855"
     CDS             complement(153..2081)
                     /gene="dnaK"
                     /locus_tag="WIX18_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HEZ5238917.1"
                     /translation="MAKVIGIDLGTTNSCLAISENGQTKVIENAEGARTTPSVIAYLD
                     GGEILVGAPAKRQAVTNAKNTIYAAKRLIGHKFEDKEVQRDIESMPFEIIKANNGDAW
                     VKAQGKELSPPQISAEVLRKMKEAAEAYLGEKVTEAVITVPAYFNDSQRQATKDAGRI
                     AGLDVKRIINEPTAAALAFGMDKGDNKDRKVAVYDLGGGTFDISIIEIANLDGDKQFE
                     VLATNGDTFLGGEDFDQRLIDHIIAEFKKEQGIDLKQDVMALQRLKEAAEKAKIELSS
                     GQQTEINLPYITMDATGPKHLAMKITRAKFESLVEDLITRSIEPCKIALKDAGLSTGD
                     IDDVILVGGQSRMPKVQEAVRDFFGKEPRKDVNPDEAVAVGAAIQGEVLSGGRSDVLL
                     LDVTPLSLGIETMGGVMTKLIQKNTTIPTKASQVFSTAEDNQSAVTIHVLQGERERAS
                     ANKSLGQFNLGDIAPAPRGMPQIEVTFDIDANGILHVSAKDKGTGKAANITIQGSSGL
                     SEEEIERMVKDAEANAEEDKKLTELVASRNQAEALIHSVKKSLADYGDKLDAAEKEKI
                     EAALKEAEEAVKGDDKAAIDAKTEALGTASQKLGEMVYAQAQAEAQAGESEQANASAK
                     KDDDVVDADFEEVKDDKK"
     gene            complement(2289..2561)
                     /locus_tag="WIX18_001856"
     CDS             complement(2289..2561)
                     /locus_tag="WIX18_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238918.1"
                     /translation="MKKTGKYLIYAAAFTAFCFAFQENRSEAKQPDITLSASLCEQFN
                     ILNAKDMDAEQVSLSKECDIIESSHDWEKEYGNLNEQEMLAGIVYE"
     gene            2747..3433
                     /locus_tag="WIX18_001857"
     CDS             2747..3433
                     /locus_tag="WIX18_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ5238919.1"
                     /translation="METFKDRLVFLWKSEAKQAKIASDIEMTIAGFSRIWNEGGLPKS
                     ETLKKIKQLKGCSIDWLLTGEGNPFPDEAPKKSLAYDTLGNEVDTDEFVFVPRYDIRA
                     AAGYGQFVDHEEPVFTMAFRRHWIENYVTRDTKNLSVISVKGDSMEGVLNDGDSILVN
                     HGENTPRDGLYVLRINENLLVKRLQIVPGGIINVISANEAYPAFEINLNDLTDDVEII
                     GRVEWFGRTI"
     gene            3565..3903
                     /gene="erpA"
                     /locus_tag="WIX18_001858"
     CDS             3565..3903
                     /gene="erpA"
                     /locus_tag="WIX18_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HEZ5238920.1"
                     /translation="MSDESPIIFTDSCCAKVADLIAEENNPDLKLRVFVNGGGCSGFQ
                     YGFTFDEIKNDDDFEIEKNGLVFLVDPMSYQYLVGAEIDYTESLQGSQFVIRNPNAET
                     TCGCGSSFSV"
     gene            3920..4066
                     /locus_tag="WIX18_001859"
     CDS             3920..4066
                     /locus_tag="WIX18_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238921.1"
                     /translation="MPSERSDGIFTFGKYIIGMNSHIIRLFEDESGFPKGTGGTVSGV
                     FVPL"
     gene            4063..>4309
                     /locus_tag="WIX18_001860"
     CDS             4063..>4309
                     /locus_tag="WIX18_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238922.1"
                     /translation="MIEMSKDYRNDLYDVYVSYPPQVDRGLIRECLRENLGEEKAEGL
                     IESLDSKPQVLVEEKCTWAKREELHDYFSYLGLDIITR"
BASE COUNT          976 a          858 c         1148 g         1327 t
ORIGIN      
        1 aaaaaatttc cagagaaccg atataacagt tagaacttgg gcttgggaat atcacggtag
       61 atgaatttgg aacctctgtt atgctatggt cttttatctc aattgaaaaa agcgcgaatc
      121 aaacggttcg cgcttttttc agacggcatc aattattttt tgtcgtcttt tacttcttca
      181 aagtcggcat ctacgacatc atcgtctttc tttgcagaag cattggcttg ttcgctttcg
      241 cctgcttggg cttcagcttg tgcttgagcg taaaccattt cccccagttt ttggctggct
      301 gtgcccagtg cttcggtttt ggcatcgata gcggctttgt cgtcgccttt aactgcttct
      361 tcggcttctt tcagcgcggc ttcgattttt tctttctcgg ctgcgtcgag tttgtcgccg
      421 tagtcggcca aagatttttt cacagagtga atcagggctt cggcttggtt gcgggaagcg
      481 accaattcag tcagtttttt atcttcctcg gcattggctt cggcatcttt caccatgcgt
      541 tcgatttctt cttcgctcaa acctgaagaa ccttggatgg tgatgttggc tgctttaccg
      601 gtgcctttgt ctttggcgga aacgtgcagg atgccgttgg cgtcgatgtc gaaggttact
      661 tcgatttgcg gcataccgcg cggtgcaggt gcgatgtcgc ccaagttgaa ctgacccaaa
      721 gatttgttgg cagaagcgcg ttcgcgttcg ccttgcagta cgtggatggt tactgcgctt
      781 tggttgtctt cggcggtaga gaacacttgc gacgctttgg tcgggatggt ggtgttcttc
      841 tgaatcagtt tggtcatcac gccgcccatg gtttcgatac ccaaagacag aggagttacg
      901 tccagtagca atacgtcgct gcggccgccg ctcaatactt cgccttggat cgctgcgcct
      961 acggcaacgg cttcgtcagg gttcacgtct ttgcgcggtt ctttgccgaa gaagtctctc
     1021 acggcttctt gtactttcgg catacgggac tgcccgccga ccaagattac gtcgtcgatg
     1081 tcgccggtgc tcaagccggc atctttcaat gcaattttgc aaggttcgat agagcgggta
     1141 atcaggtctt caaccaggct ttcgaatttg gcgcgggtaa ttttcatcgc caagtgtttc
     1201 gggccggttg cgtccatggt gatgtacggc aggttaattt cggtttgctg gccgctggac
     1261 aattcgattt tggctttttc ggcagcttct ttcaggcgtt gtagagccat cacgtcttgt
     1321 ttcaaatcaa tgccttgttc ttttttgaac tcggcgatga tgtggtcgat gaggcgttgg
     1381 tcgaagtctt caccgcccaa gaaggtatcg ccgttggttg ccaatacttc gaattgtttg
     1441 tcgccgtcga ggttggcgat ttcgatgatg gaaatatcga aagtaccgcc gcccaagtca
     1501 tatacggcta ctttgcggtc tttgttgtcg cctttgtcca taccgaatgc caaagcggct
     1561 gcggtcggct cgttgatgat gcgtttcacg tccaaaccgg cgatacggcc tgcgtctttg
     1621 gtggcttgac gttggctgtc gttgaagtag gcagggacgg taatcacggc ttcggttact
     1681 ttttcgccca agtaagcttc ggcggcttct ttcattttac gcaggacttc tgcggaaatt
     1741 tgaggaggag acagctcttt gccttgtgct tttacccatg cgtcgccgtt gttggctttg
     1801 atgatttcga aaggcataga ttcgatgtcg cgttggactt ctttgtcttc aaatttgtgg
     1861 ccgatcaggc gtttggcggc gtaaatggtg tttttagcgt tggttacggc ttggcgtttg
     1921 gcaggcgcac cgacgaggat ttcgccgccg tccaaataag cgataacgga cggcgtggtg
     1981 cgtgcgcctt ctgcgttttc gatcactttg gtttgaccgt tttcggaaat ggccaaacaa
     2041 gagttggttg tacctaagtc gataccgatt acttttgcca tgtggataat cctatttgat
     2101 tttgcttatt ttgagaaata tgttggaaca ttttgtcccg atgggctgta aatagggcgg
     2161 gcggcgggct gtttcaagct acagcatggc tataagtata taactttatg aatatattgg
     2221 ttttatattt gatttaatac atttggctcc aatgcattta agcataatat ttcaaatggc
     2281 aggcaggttt attcatagac gatgccggcg agcatttcct gttcgttcaa gttgccgtac
     2341 tctttttccc agtcgtgtga agactcgatg atgtcgcatt ctttggaaag ggagacttgt
     2401 tctgcatcca tatctttggc gttcagtatg ttgaattgtt cgcacaggga tgcggataaa
     2461 gtgatgtcag gctgtttggc ttcagaacgg ttttcttgga aggcaaagca gaatgcggta
     2521 aatgccgcag catagataag atatttgccg gttttcttca ttttctatcc tttttctgtc
     2581 aactcaggat taaacctatg gaaaatctta aaaattatgt attgagtaag aaaaatcata
     2641 atttaaattt agtttatcat agttgtttcg tttttgggat agctaaggta aaatatattt
     2701 catgtttact ttagatgatt gaatgaaggg gagcggaagg atatttatgg aaacctttaa
     2761 agacagactg gtttttttat ggaaaagcga agcgaagcag gcaaaaatcg catccgatat
     2821 tgaaatgacg attgcgggct tcagcaggat atggaatgaa ggcggtctgc cgaagtctga
     2881 aacattaaaa aaaatcaagc agttgaaggg gtgtagtatc gattggctgc tgaccgggga
     2941 gggtaatccg tttccggatg aagccccaaa aaaatccctt gcttacgata ccttgggaaa
     3001 tgaagtcgat acggacgagt ttgtctttgt gccgagatat gatattcggg cggctgcggg
     3061 atacgggcag tttgtcgatc atgaggaacc ggtatttaca atggcgttca gacggcattg
     3121 gattgagaat tatgttaccc gcgatacgaa aaacctgtct gtaatttccg tcaaggggga
     3181 ttcgatggag ggggttttga atgacggcga ttcgattttg gtcaatcatg gtgaaaatac
     3241 gccgagggac ggtctgtatg tgttgcggat taatgaaaat ctgctggtta aacgtttaca
     3301 gattgtaccg ggcgggatta tcaatgtgat ttctgcaaac gaggcttatc ctgcttttga
     3361 aatcaatttg aacgatttga ccgatgatgt ggagattatc gggcgtgtcg agtggttcgg
     3421 caggacgatt tgagtttggg gcttgaaatt gcaggcggtc aaacttatct attggaacaa
     3481 ttcctttttc aaaggcgaag cctgcttgcc tttaaagggg gtttgagaga gaatgcagaa
     3541 aatattatat taaggaataa caccatgtcg gatgaaagcc ctattatttt tactgacagc
     3601 tgctgtgcca aagttgccga tttgattgcc gaagaaaaca atcccgattt gaaattgcgg
     3661 gtttttgtca atggcggcgg ctgttcgggt ttccagtacg gatttacttt tgacgaaatc
     3721 aaaaacgacg acgattttga aattgagaaa aacggtttgg tctttttggt cgatccgatg
     3781 agctatcaat atctggtcgg tgcggaaatc gactatacgg aaagtttgca gggttcgcaa
     3841 ttcgtcatcc gcaatccgaa tgcggaaaca acctgcggtt gcggatcgtc gttttccgta
     3901 tgaccgcttg gtttgtgtga tgccgtctga acgttcagac ggcattttta cttttggaaa
     3961 atatattatc gggatgaatt cacatataat ccgattgttt gaagatgaat cgggtttccc
     4021 gaaaggaacg ggcggaacgg tatcaggcgt atttgttccc ttatgattga gatgagtaaa
     4081 gattaccgaa atgatttgta cgatgtatat gtttcctacc cgccccaagt ggatcgcggg
     4141 cttatccggg agtgcctcag ggagaatctc ggcgaggaaa aggcggaagg attgatcgaa
     4201 tcgctcgatt ccaaacctca agtgctggtt gaggaaaaat gcacttgggc gaaacgggaa
     4261 gagttgcatg attatttcag ctatttgggt ttggatatta ttacccgga
//
LOCUS       DAWITQ010000162         4259 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.162, whole genome shotgun sequence.
ACCESSION   DAWITQ010000162 DAWITQ010000000
VERSION     DAWITQ010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4259)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4259)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4259
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.162"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            536..2263
                     /gene="ilvB"
                     /locus_tag="WIX18_001861"
     CDS             536..2263
                     /gene="ilvB"
                     /locus_tag="WIX18_001861"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HEZ5238923.1"
                     /translation="MQLSGAQIIVQSLKAEGVEYVFGYPGGAVIEIYDALFQLNKFKH
                     ILTRHEQAAVHAADAYARVSGKVGVALVTSGPGVTNALTGIATAYTDSIPMVVISGQV
                     GNSLIGTDAFQEVDTVGITRPCVKHNFLVTDINELAETIKKAFQIAASGRPGPVVVDV
                     PKDVTQAMAKFSYPQEDIFIRSYQPVVQGHIGQIKKAVQMLASAKRPVVYFGGGVVLG
                     NASEELTRFVRMTGAPCTGTLMGLGAYPSGDRQFLGMLGMHGTYEANLAMQNADVVLA
                     VGARFDDRVVSVPSKFFEKAKKVIHIDVDPSSIAKRVKADIPIVGDVKNVLSEMVALW
                     QKQESVPSEDALGKWWKTIEEWRSRDCLWFDNGSEIIKPQYVIQKLAEITGNSAIITS
                     DVGQHQMFAAQYYPFERPRQWLNSGGLGTMGVGLPYAIGAKLAAPDQDVFCITGDGSI
                     QMNIQELSTCFQYRIPVNVITLNNGYLGMVRQWQEIYYGGRESETYFDSLPDFVKLAE
                     AYGHIGIRVDKKSDVEGALLEALNQKDRLVFIDFLTDQKQNVMPMVGNGKGLDEMVLP
                     PHMRADEKA"
     gene            2274..2765
                     /gene="ilvN"
                     /locus_tag="WIX18_001862"
     CDS             2274..2765
                     /gene="ilvN"
                     /locus_tag="WIX18_001862"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HEZ5238924.1"
                     /translation="MRHILSVLIENESGAMSRVVGLFSARDYNIDSLAVAPTEDKTLS
                     RMTIVTHGDEQVIEQITKQLNKLIEVIKVVDLNESRFVERELMLVKVRAAGKDRDEFL
                     RLTEIYRGSIIDVTDRSYTIEITGSTDKLDSFLETVGRAQILETVRTGAAGIGRGERI
                     LKI"
     gene            2832..3125
                     /locus_tag="WIX18_001863"
     CDS             2832..3125
                     /locus_tag="WIX18_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEZ5238925.1"
                     /translation="MSNIKIVALVTVKPEYTETLAAQFKELVKASRAEEGNISYDLHQ
                     EIGKPNRFVFVENWKSQAAIDEHNASAHFQAFVQSVDGKTEALEIVLMNEVAD"
     gene            3205..4218
                     /gene="ilvC"
                     /locus_tag="WIX18_001864"
     CDS             3205..4218
                     /gene="ilvC"
                     /locus_tag="WIX18_001864"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011239815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HEZ5238926.1"
                     /translation="MQVYYDKDADLSLIKGKTVAIIGYGSQGHAHAANLKDSGVNVVI
                     GLRQGSSWKKAEAAGHVVKTVAEATKEADVVMLLLPDETMPAVYHAEVTANLKEGATL
                     AFAHGFNVHYNQIVPRTDLDVIMVAPKGPGHTVRSEYKRGGGVPSLIAVYQDNSGKAK
                     DIALSYAAANGGTKGGVIETTFREETETDLFGEQAVLCGGVVELIKAGFETLTEAGYA
                     PEMAYFECLHEMKLIVDLIFEGGIANMNYSISNNAEYGEYVTGPEVVNASSKEAMRNA
                     LKRIQTGEYAKMFIQEGNVNYASMTARRRLNADHQVEKVGAQLRAMMPWITANKLVDQ
                     DKN"
BASE COUNT         1107 a         1021 c         1076 g         1055 t
ORIGIN      
        1 caatatatta agtcgttgtt agccctcttg gttctgtcaa tgccgtccaa tacagtccgg
       61 tgcaatgagc cattttcagg aagtatggtt gggaatattt ttgatatatc aaaaataaaa
      121 tcaagttcaa tcaatatccc gagtctttat tgggatgaaa ccatgtaaat tttacaattc
      181 ttgatatcga agaagggttt ttcacatctg cccctcctgc ataaactgtc aacaatttcc
      241 atctttcaaa aaaggtactc ctgattttat tcttttaaaa tcaatcaata atttctctgc
      301 tttcaaaaaa tattaaaaga tgaaagattt ttcttgattg aactgtcggt ttgcgttatc
      361 gtttctactc tttttcacaa actctgtgtt cctttccaat tgattggata atccgtctgt
      421 tgccgtgttc ccccaatgcg cgtaccctaa atcgctgctt ggtggaattg cattacaggt
      481 gctgtggcaa agcggtttgt ccctattggt ttgaaaccgt ataaaagagg tcgttatgca
      541 gttatcaggc gcgcaaatca tagtgcagag tctcaaagcc gaaggtgtcg agtacgtttt
      601 cggttatccc ggcggtgcgg ttatcgaaat ctacgatgcc cttttccaac tcaataaatt
      661 caagcacatt ctgacccgtc acgagcaggc ggcagtacac gcggcagatg cgtatgcgcg
      721 cgtcagcggt aaggtgggcg tggcattggt tacatccggc ccgggcgtta ccaatgcact
      781 gaccggtatt gctactgcct atacggattc gattccgatg gtggtcatca gcgggcaggt
      841 aggcaattcc ctgattggta cggatgcgtt ccaagaagtt gatacggtgg gtattacccg
      901 tccgtgcgtc aaacacaatt tcctggttac ggacatcaat gagttggcgg aaaccattaa
      961 aaaggcgttc caaattgccg caagcggccg accggggccc gtggtggttg atgtcccgaa
     1021 agatgttacg caggcgatgg cgaaattcag ctatcctcag gaagacattt ttatccgttc
     1081 gtatcaaccg gttgttcaag ggcatatcgg tcagattaaa aaggccgtgc agatgttggc
     1141 atctgccaaa cgtccggtcg tctattttgg cggcggcgtg gtgttgggta atgcttctga
     1201 agagctgacc cgatttgtcc gaatgacggg tgctccgtgc acgggtacgc tgatgggctt
     1261 gggcgcttat ccttccggcg accgccaatt cctcggtatg ctcggtatgc acggtactta
     1321 cgaggcaaac cttgccatgc agaatgcgga tgtcgttctt gccgtaggtg cgcgttttga
     1381 cgaccgtgtg gtttccgtac cgtccaaatt tttcgagaag gcgaagaagg ttatccatat
     1441 cgatgtcgat ccttccagca tcgccaaacg cgtgaaggcg gacattccga ttgtcggcga
     1501 cgtgaaaaac gttttgtccg agatggttgc gctgtggcaa aaacaagagt ccgtgccgtc
     1561 tgaagatgct ttgggcaaat ggtggaaaac catagaggaa tggcgttccc gcgattgctt
     1621 gtggtttgac aacggcagcg aaattatcaa gccacaatat gtgattcaga agcttgccga
     1681 gattaccggc aattcggcaa tcatcacatc ggatgtaggg cagcatcaaa tgtttgcggc
     1741 tcaatattat cccttcgaac gtccgcgcca atggctcaac tccggcggtt tgggtacgat
     1801 gggcgttggt ctgccttatg cgattggtgc aaaacttgcc gccccggatc aagacgtatt
     1861 ctgtattacc ggcgacggct cgatccagat gaacatccaa gagctgtcca cctgtttcca
     1921 atatcggatt ccggttaacg tcattacgct gaacaacggt tatctcggta tggtacgcca
     1981 gtggcaggaa atatattacg gcggccgaga gtcggaaact tatttcgatt ctttgcccga
     2041 tttcgtcaaa cttgccgagg catacggtca tatcggcatc cgcgtggaca agaagtctga
     2101 tgtggaaggt gcgttgttgg aagcattgaa ccaaaaagac aggctggtgt ttatcgactt
     2161 cctgaccgac cagaaacaga atgtgatgcc catggtcggt aacggcaaag gtttggacga
     2221 aatggtactt ccgccgcata tgcgtgcgga cgaaaaggcg taaggagagg caaatgcgac
     2281 atatcttatc tgttctgatt gaaaacgaat caggtgcgat gagccgcgtg gtcggtttgt
     2341 tctctgcacg cgattacaat atcgattctt tggcggttgc gccgaccgaa gacaaaaccc
     2401 tgtcccgtat gaccatcgtt acccacggcg acgagcaggt catcgaacaa atcaccaagc
     2461 aactcaataa attgattgaa gtgattaaag tggtcgattt gaacgaaagc cgttttgtcg
     2521 aacgcgaact gatgttggta aaagtccgtg ccgccggcaa agaccgcgac gaatttttac
     2581 gcttgaccga aatctaccgg ggcagcatca tcgacgtaac cgaccgcagc tatacgattg
     2641 aaattaccgg ctcgacagac aagctggatt cctttttgga aacggtcgga cgcgcccaaa
     2701 ttttggaaac cgtacgcaca ggcgcggccg gcatcggtcg cggtgagcgt attttgaaaa
     2761 tttaacgccg taacctttca gacggcacgg tatttgaatg tcgtctgaaa aacgaacggc
     2821 aggagagatt tatgtcgaac attaaaattg tcgcactggt taccgtcaaa ccggaataca
     2881 cagaaacact ggcagcacag tttaaagaac tggtcaaagc cagccgtgca gaagagggca
     2941 acatcagcta cgatctccat caggaaatcg gcaaaccgaa ccgttttgtt ttcgtggaaa
     3001 attggaaatc tcaagcagct attgacgaac ataacgccag cgcgcatttc caagccttcg
     3061 tccagtccgt cgacggcaaa accgaagcgt tggaaatcgt attgatgaat gaagttgccg
     3121 attaagcggc acactctgtt taacccgtcc gaagccgctc aacattttaa ggcttcgaca
     3181 accatttacc ttaaaggaaa tcaaatgcaa gtctattacg ataaagatgc cgatctgtcc
     3241 ctaatcaaag gcaaaaccgt tgccatcatc ggttacggtt cgcaaggtca tgcccatgcc
     3301 gccaacctga aagattcggg tgtaaacgtg gtgattggtc tgcgccaagg ttcttcttgg
     3361 aaaaaagccg aagcagccgg tcatgtcgtc aaaaccgttg ctgaagcgac caaagaagcc
     3421 gatgtcgtta tgctgctgct gcctgacgaa accatgcctg ccgtctatca cgccgaagtt
     3481 acagccaatt tgaaagaagg cgcaacgctg gcatttgcac acggcttcaa cgtgcactac
     3541 aaccaaatcg ttccgcgtac cgacttggac gtgattatgg ttgcccccaa aggtccgggt
     3601 cataccgtac gcagtgaata caaacgcggc ggcggcgtgc cttctctgat tgccgtttac
     3661 caagacaatt ccggcaaggc caaagacatc gccctgtctt atgcggctgc caacggcggc
     3721 accaaaggcg gtgtgattga aaccactttc cgcgaagaaa ccgaaaccga tctgttcggc
     3781 gaacaagccg tattgtgcgg tggcgtggtc gagttgatca aagcaggttt tgaaaccctg
     3841 accgaagccg gttacgcgcc tgaaatggct tacttcgaat gtctgcacga aatgaaactg
     3901 atcgttgacc tgattttcga aggcggtatt gccaatatga actactccat ttccaacaat
     3961 gcggagtacg gcgaatacgt taccggccct gaagtggtca atgcttccag caaagaagcc
     4021 atgcgcaatg ccctgaaacg catccaaacc ggcgaatacg caaaaatgtt tatccaagag
     4081 ggtaatgtca actatgcgtc tatgactgcc cgccgccgtc tgaatgccga ccaccaagtt
     4141 gaaaaagtcg gcgcacaact gcgtgccatg atgccttgga ttactgccaa caaattggtt
     4201 gaccaagaca aaaactgatt gttttcaaac gggactgcct acacatcgtg taggcagtt
//
LOCUS       DAWITQ010000163         4243 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.163, whole genome shotgun sequence.
ACCESSION   DAWITQ010000163 DAWITQ010000000
VERSION     DAWITQ010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4243)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4243)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4243
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.163"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..570
                     /locus_tag="WIX18_001865"
     CDS             <1..570
                     /locus_tag="WIX18_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ5238927.1"
                     /translation="FHFRKTEKECAVLGTLSRLDTVRAVHLMLDILKKMVDRGMPVRL
                     NIAGIGEEMDNLKTQAKRLGIEDKITFLGGIRDLTGYFKEIDILVNTPHCVGDHGAGV
                     GNNILEAGLYDTPVVTYDMAGISEMVVNGETGYCIPFGDEEAFIAAVDTLVRQPLLRE
                     AMGKRLHAHVAALCSDDEIYRTTMAAYTM"
     gene            590..1756
                     /locus_tag="WIX18_001866"
     CDS             590..1756
                     /locus_tag="WIX18_001866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ5238928.1"
                     /translation="MNITIVAPYCSLPSEPYFNRFWYLAERLSQSHDVLLITSRFRHY
                     DKSFRRPEDAEAASQGRLKVMLLEESGYGKNVSLERVASHYRFVKNFEQWLKNCRPGE
                     QDIVYSAYPLMATNLLLGKHKARLGYKLIVDVQDVWPESFSSVVPFLKKVPHKLLPFA
                     SRANRAYRCADALVAVSQTYLDRAKEANPNVPGEAVYIGTDFAAIAPPPRFRSKTVRL
                     FYLGTLSYSYDVETVCKGVRKLLDDGENVELHIMGGGPDLEKLKQYENRAIKFYGYLP
                     YSEMMSIAKACDIAVNAIHSHAMQSVTNKLSDYMALQKPILNSQNNAEVLDLMNLLPH
                     ENYRSGDVDGFVQAAKDILKRKNDPVQSEEIVRRFKRDISYQKIVNLIERLANE"
     gene            1749..3326
                     /locus_tag="WIX18_001867"
     CDS             1749..3326
                     /locus_tag="WIX18_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEZ5238929.1"
                     /translation="MSKAVKRLFDIIASASGLIVLSPVFLILAYLIRKNLGSPVFFIQ
                     ERPGKDGKPFKMVKFRSMRDALDSDGIPLPDGERLTPFGKKLRAASLDELPELWNVLK
                     GEMSLVGPRPLLTGYLPLYNDFQNRRHEMKPGITGWAQVNGRNALSWDEKFACDVWYI
                     DHYSFWLDMKILFLTIRKVLIKEGISAEGEATMPYFTGNQTNEKNNILILSAGRRVEL
                     VQDFQTEAARFSDGISVFATDLNPRMSSACHVSDGSFEVPPISADSYIDSIFNLAVRE
                     NIGLIIPTIDTELQKLADERERFEAASVHIVVSDSDFIAQCRDKRKTATLFARYGIRS
                     PEIYDRKKLVFPCFAKPYDGSRAIGAKRIDTPADLTPEVLADTKLMFCQFIDIENKFS
                     EFTVDMYYDRQCRLKCAIPRKRLEVRSGEISKGVTCKNSLYQTLLEKMSVLQGARGCI
                     TVQFFYNEETGEFYGVEINPRFGGGFPLTYAAGGNYPSRLMREYLGDEEIPFSDDWEN
                     NLIMLRYDAKVLVHEND"
     gene            3313..4000
                     /locus_tag="WIX18_001868"
                     /pseudo
     CDS             3313..4000
                     /locus_tag="WIX18_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219797.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
     gene            4048..4242
                     /locus_tag="WIX18_001869"
     CDS             4048..4242
                     /locus_tag="WIX18_001869"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238930.1"
                     /translation="MTKYYSWGVNGFPPYVFDTIWKRWKLNGRGGGYRVRHPGRHNRR
                     GQSGKAAAAQKPQDRDGISD"
BASE COUNT         1076 a         1191 c         1013 g          963 t
ORIGIN      
        1 tttcatttcc ggaaaaccga aaaagaatgc gccgtactcg gcacgctttc ccgtttggac
       61 accgtccgcg ccgtgcatct gatgttggat attttgaaga aaatggttga ccgaggtatg
      121 cccgtccgcc tcaacatagc gggcatagga gaagaaatgg acaatttgaa aacgcaggcg
      181 aagcgtctgg gcattgaaga caaaattacc ttcctcggcg gcatacgcga cttgaccggc
      241 tacttcaaag aaatcgatat tttggtgaac acgccgcatt gcgtgggcga ccacggtgca
      301 ggtgtcggca acaatatttt ggaagccggc ctttacgaca cgcctgtcgt gacctacgac
      361 atggcgggta tttccgaaat ggtcgtcaac ggagaaacgg gttactgcat ccccttcggc
      421 gacgaagaag cctttatcgc cgccgtagac acgctcgtca gacagccgct gttgcgcgaa
      481 gcaatgggca aaaggttgca cgcacacgtc gccgcactct gttccgacga cgaaatctac
      541 cgtaccacca tggcggcgta taccatgtaa tgccgtctga aagccgccga tgaacatcac
      601 catagtcgcc ccttattgct cgctgccgtc cgaaccgtat ttcaaccgct tttggtatct
      661 ggcagaacga ttgtcgcaat cgcacgacgt gttgctgatt accagccgtt tccgccacta
      721 cgacaaatcc ttcagacggc ccgaagatgc cgaggccgcc tcgcaaggcc gtctgaaagt
      781 catgctgttg gaagaaagcg gctacggcaa aaacgtgtct ttagaacgtg ttgccagcca
      841 ttaccgcttc gtcaaaaatt ttgagcaatg gctgaaaaac tgccggccgg gcgaacaaga
      901 catcgtctat tccgcctatc cgctgatggc aaccaacctg ctgttgggca aacacaaagc
      961 gcgtttgggc tacaaactga ttgtcgatgt gcaggacgta tggccggagt ctttctcctc
     1021 ggtcgtaccg tttttgaaaa aagtaccgca caagctgctg ccctttgctt cacgcgccaa
     1081 ccgtgcctac cgctgcgccg acgcgctggt tgccgtatcg cagacttatc tcgaccgcgc
     1141 caaagaagcc aatccgaacg tacccggcga agccgtctat atcggtacgg attttgccgc
     1201 catcgccccc cccccgcgat tccgctccaa aaccgtccgc cttttctact tgggcacgct
     1261 cagttacagc tatgacgtgg aaaccgtgtg caaaggcgtt cggaaacttt tagacgacgg
     1321 cgaaaacgtc gaattgcaca ttatgggcgg aggacccgat ttggagaaac tcaaacaata
     1381 tgaaaatcgc gccatcaagt tttacggtta tttaccctat tctgaaatga tgtcgattgc
     1441 caaagcgtgc gacattgccg tcaacgccat ccatagccac gccatgcagt cggttaccaa
     1501 caaactctcc gactatatgg ctttgcaaaa accgattctg aacagtcaga acaatgccga
     1561 agtcctcgac ctcatgaatc tgctgccgca cgaaaactac cgttccggcg atgtggacgg
     1621 tttcgttcaa gccgccaaag atattttgaa gcgcaaaaac gatcctgttc agtccgaaga
     1681 aatcgtccgc cgcttcaagc gcgacatttc ctatcaaaaa atcgtcaacc tgattgaaag
     1741 attggcaaat gagtaaagcc gtcaaacgcc tgttcgacat catcgcatcc gcatcgggac
     1801 tgattgtcct ctcacccgtt ttcctgattt tggcgtacct catccgcaag aatctgggtt
     1861 cgcccgtctt cttcattcag gaacgccctg gaaaggacgg aaaacctttt aaaatggtca
     1921 aattccgttc catgcgcgac gcgcttgatt cagacggcat tccgctgccc gacggagaac
     1981 gcctgacacc gtttggcaaa aaactgcgtg ccgccagctt ggacgaactg cccgaattat
     2041 ggaatgtctt aaaaggcgag atgagcctgg tcggcccgcg cccgcttttg acgggctacc
     2101 tgccgcttta taacgacttc caaaaccgcc gccacgaaat gaaaccgggc attaccggct
     2161 gggcgcaggt caacgggcgc aacgcgcttt cgtgggacga aaagttcgcc tgcgatgttt
     2221 ggtatatcga ccattacagt ttttggctgg atatgaaaat cctgtttttg acaatcagaa
     2281 aagtcttgat taaagaaggc atttcggcgg aaggggaagc cactatgcct tatttcactg
     2341 gaaatcaaac taatgaaaaa aataatatac tgattctgtc ggcaggtcgc cgtgtcgaat
     2401 tggtgcagga cttccaaacc gaagccgcac gtttttcaga cggcatcagc gtttttgcca
     2461 ctgacctcaa cccccgcatg tcttctgcct gccatgtttc ggacggttca tttgaagtgc
     2521 cgccgattag tgccgattca tatatcgaca gcattttcaa tctggcggta cgcgaaaata
     2581 tcggtttaat catcccaacc atagacaccg aactgcaaaa gctggcagac gagcgcgaac
     2641 gctttgaagc ggcaagtgtc cacatcgtcg tttccgattc ggacttcatc gcacaatgcc
     2701 gcgacaaacg gaaaaccgcc accttgtttg cccgctacgg catacgctca cccgaaattt
     2761 acgaccgcaa gaagttggtt ttcccttgct tcgccaagcc ttatgacggc agccgcgcca
     2821 tcggtgcaaa acggattgac acacctgccg acctgacacc ggaagtcttg gcagacacca
     2881 aattaatgtt ctgtcagttt atcgacatcg aaaataaatt ttccgagttt accgtcgata
     2941 tgtattacga ccgtcaatgc cgtctgaaat gcgccatccc gcgaaaacgc ttggaagtgc
     3001 gctccggcga aatcagcaaa ggcgttacct gcaaaaacag cctctaccaa acgctgctgg
     3061 aaaaaatgtc ggtattgcag ggcgcgcgcg gctgtatcac ggtgcagttc ttctacaacg
     3121 aagaaaccgg cgaattctac ggcgtggaaa tcaacccccg cttcggcggt ggcttcccgc
     3181 tgacgtatgc cgcaggcggc aattatccga gccggttgat gcgcgaatac ctcggcgacg
     3241 aagaaatccc gttttcagac gactgggaaa acaacctcat tatgttgcgc tacgatgcca
     3301 aggtcttggt tcatgaaaac gattaatcct gaaaccaccg tcatcgtctt cgacttggac
     3361 gataccctgt attcggaata cgaatacaag ctctccggta tccgttcggt catcgatacc
     3421 gttgccgcac tgtatcccga ttggaattca gacaacctat ggcgcaacat cgaccccgac
     3481 ggcaaagatt ggctggacaa attgtgccgc cactgtggtt ttaatgaatc ggaaaaacag
     3541 gttctttctg tggcaatacc ggctgcaccg cccgacgctg actccgtatg ctccgccgga
     3601 tttcctgtcc gaactgaccg cgcccttcgc cgcacgcgcg ctgattaccg acggcagaag
     3661 cctgacccaa cgcctgaagc tggaagcctt gggtctgtct tccctgtttg acgacatcct
     3721 catctctgaa gcctgctctt cggaaaagcc cgacggcaaa cgcttccgcc atcttcaaga
     3781 caaatatgcc gacaaggcag gctgcttcat ctatatcggc gacaacattt ccaaagactt
     3841 tatcgcgctg aacactttgg gctggataac cataggattg cttccctccg gacagaacat
     3901 ccaccgccac cagcctgaaa gttttaacac agaatatcat cccgactttt gggttaactc
     3961 ccttcaagat ttagttccta taattgattc aaatacttaa ccattacata atcaaacatg
     4021 cactcacaat attaaaagga ctatttcatg acaaaatatt attcatgggg cgtaaacggc
     4081 tttccgccct acgttttcga caccatttgg aaacgatgga agttgaatgg gcgcgggggc
     4141 ggttatcgtg tgcgacatcc cggacggcat aaccgtcgcg ggcaatccgg caaagccgct
     4201 gccgcgcaaa aaccccaaga ccgggacggc ataagcgatt aaa
//
LOCUS       DAWITQ010000164         4170 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.164, whole genome shotgun sequence.
ACCESSION   DAWITQ010000164 DAWITQ010000000
VERSION     DAWITQ010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4170)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4170)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4170
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.164"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..107)
                     /locus_tag="WIX18_001870"
     CDS             complement(<1..107)
                     /locus_tag="WIX18_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HEZ5238931.1"
                     /translation="MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIE"
     gene            complement(235..1485)
                     /locus_tag="WIX18_001871"
     CDS             complement(235..1485)
                     /locus_tag="WIX18_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEZ5238932.1"
                     /translation="MFSKSVTLAQYDPDLAAAIAQEDQRQQDHVELIASENYVSCAVM
                     ETQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRVKKLFGAQYANVQPHSGSQAN
                     QAVYASVLKPGDTILGMSLAHGGHLTHGASVNISGKLYNAVTYGLDENEVLDYAEVER
                     LALEHKPKMIVAGASAYALQIDWAKFREIADKVGAYLFVDMAHYAGLIAGGEYPNPVP
                     FCDFVTTTTHKTLRGPRGGVILCRDNTHEKALNSSIFPSLQGGPLMHVIAAKAVAFKE
                     ALQPEFKQYAKQVKINAAAMAEELVKRGLRIVSGRTESHVFLVDLQPMKITGKAAEAA
                     LGKAHITVNKNAIPNDPEKPFVTSGIRIGSAAMTTRGFNEADARVLANLVADVLSNPE
                     DEANLAKVREQVTALCNKYPVYGA"
     gene            complement(1552..1747)
                     /locus_tag="WIX18_001872"
                     /pseudo
     CDS             complement(1552..1747)
                     /locus_tag="WIX18_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221594.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1966..3741)
                     /gene="ggt"
                     /locus_tag="WIX18_001873"
     CDS             complement(1966..3741)
                     /gene="ggt"
                     /locus_tag="WIX18_001873"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEZ5238933.1"
                     /translation="MAKTYLLTALIMSMTISGCQVIHANQGKVNTHSAVITGADAHTP
                     EHATGLIEQKQVIASDFMVASANPLATQAGYDILKQGGSAADAMVAVQTTLSLVEPQS
                     SGLGGGAFVLYWDNTAKTLTTFDGRETAPMRATPELFLDKDGQPLKFMEAVVGGRSVG
                     TPAIPKLMETIHQRYGVLPWGKLFDTPIRLAKQGFEVSPRLAISVEQNQQHLARYPKT
                     AAYFLPNGVPLQAGSLLKNLEFADSVQALAAQGAKALHTGKYAQNIVSVVQNAKDNPG
                     QLSLQDLSDYQVVERPPVCVTYRIYEVCGMGAPSSGGIAVGQILGILNEFSPNQVGYD
                     AEGLRLLGDASRLAFADRDVYLGDPDFVPVPIRQLISKDYLKHRSQLLEQSDKALPSV
                     SAGDFIHEWVSSQAIELPSTSHISIVDKAGNVLSMTTSIENAFGSTLMANGYLLNNEL
                     TDFSFEPIKQGKQVANRVEPSKRPRSSMAPTIVFKAGKPYMAIGSPGGSRIIGYVAKT
                     IVAHSDWNMDIQDAISAPNLLNRFGSYELETGTTALQWQQALNDLGYKTDVRELNSGV
                     QAIIIEPSRLVGGADPRREGRVMGD"
     gene            complement(3909..4145)
                     /locus_tag="WIX18_001874"
     CDS             complement(3909..4145)
                     /locus_tag="WIX18_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin"
                     /protein_id="HEZ5238934.1"
                     /translation="MWIFSACSRGADPIGRPFAFVNILENPEIRSTLPLIANRPTFPQ
                     LWVNGELIGGSDIILQMYQSGELKPLIEEHSPKV"
BASE COUNT         1041 a          982 c          988 g         1159 t
ORIGIN      
        1 tgttcgatcg gctgccaatc aatcacttga tccaacttca atagtgggaa acggtcgatg
       61 tgtttggcaa tcatggcttg tgcggtttgc tgaaagaagg tgctcatgga acatccccta
      121 aatgtcttgg tgggaattta ggggattttg gggaattttg caaaggtttc cgcctgaaac
      181 attatgagat ttcaggcggc attggattgc ttagcggaat atttttaaaa aggcttacgc
      241 gccgtaaacg gggtatttat tgcacaaagc agttacttgt tcgcggactt tggcgaggtt
      301 ggcttcgtct tcggggttag acaatacgtc ggcaaccaag ttcgccaata cgcgcgcgtc
      361 ggcttcgtta aaaccgcgtg tggtcatggc ggcggaaccg atgcggatgc cggaggtaac
      421 gaagggtttt tccggatcat tcgggatggc gtttttgttg acagtgatgt gcgctttgcc
      481 caaagcagct tcggcggctt tgccggtaat tttcatcggt tgcaggtcaa cgaggaaaac
      541 gtggctttcg gtgcggccgg aaacgatgcg caaaccgcgt ttaaccaact cttccgccat
      601 ggcggctgca ttgattttca cttgttttgc gtattgtttg aactcgggtt gcaatgcttc
      661 tttaaacgcc acggctttgg cggcgataac gtgcatcagc gggccgcctt gcaggcttgg
      721 gaagatggaa gagttcaacg ctttttcgtg ggtattgtcg cggcacaaaa ttacgccgcc
      781 gcgaggaccg cgcagggttt tgtgggtggt ggtggtaacg aagtcgcaga atggcaccgg
      841 gttgggatat tcgccaccgg caatcagtcc ggcgtagtgc gccatgtcga caaagaggta
      901 tgcgccgact ttatcggcga tttcgcggaa ttttgcccag tcgatttgca acgcgtaggc
      961 agacgcaccc gccacaatca ttttgggttt gtgttcgagc gcgaggcgtt cgacttcggc
     1021 ataatcgagc acttcgtttt catccaaacc ataagtaacg gcattgtaga gtttgcctga
     1081 gatattaacg ctcgcgccgt gggtcaggtg gccgccgtgc gccagagaca tacccaaaat
     1141 ggtgtcgcct ggttttaaaa cggaagcgta cacggcttgg ttggcttgcg agccggagtg
     1201 cggttggacg ttggcgtact gcgcgccgaa cagttttttg acgcggtcaa tcgccaattg
     1261 ttcgacaata tcgacgtatt cgcagccgcc gtagtagcgt ttgccggggt agccttcggc
     1321 gtatttgttg gtcagctggg aaccttgcgt ttccattacg gcgcagctga cgtagttttc
     1381 agaggcaatc agctcgacgt ggtcttgctg gcgttggtct tcttgggcaa tggctgctgc
     1441 caaatcgggg tcatattgtg cgagggtaac gctttttgaa aacatgttct cggctccttt
     1501 gtgtaatcag ggtatcatga gtgttttttg tataaaaaaa tacttcaaaa cctaaggcag
     1561 atagtccata atgcgtaaat tttctttggc attatcaggt aatttattta acatgctggt
     1621 ttttagcgtc tcattacctt tatgttagta caaggctacc caaaggcaat acatcaaatg
     1681 gtaaattttc ggcagtttgt gcaaaatcaa tcaaataacc agcaccaacc acatctttat
     1741 cagccataac ccgctgatac accacttgcc aagacaactc tcctgcccca ccatgtctta
     1801 aaatcagatg aatggcttgt aatgctgtgt ttggcgtctc acaaattgcg aagatctgct
     1861 cagaagcttg cttgatggct tgtatttttg tttgattact cacaatttcc ccctatttta
     1921 atattaactt aatgcggtca aattcacaaa atacaagctt cacctctaat cacccatcac
     1981 tcgaccttct cggcgtggat cggcaccacc aaccagcctg cttggctcga taataatggc
     2041 ttgaacacct gaatttagct cacgcacgtc agtcttatag cccaaatcat ttaatgcttg
     2101 ttgccactgg agggcggttg tacccgtttc tagttcatag ctaccaaagc gatttaataa
     2161 attgggtgca ctgatggcat cttggatatc catattccag tcgctatgtg ccacaatcgt
     2221 cttagcgaca tagccaatga tacggctacc acctggggag ccgattgcca tataaggctt
     2281 gcctgcttta aatacgatgg ttggtgccat tgaggagcgt ggtctcttgc tgggctcgac
     2341 acgattggcg acctgtttgc cctgctttat tggctcaaaa ctaaagtctg tcagctcatt
     2401 attcagcagg tagccatttg ccatcaaagt tgagccaaac gcattttcaa tggaagtcgt
     2461 cattgatagc acattgcccg ccttatccac aattgatata tgactggtag aaggtaactc
     2521 aatcgcttgt gaggacaccc actcatgaat aaaatcgcct gcagatacgc taggcaatgc
     2581 cttatccgac tgctcaagca gctggctgcg atgttttagg tagtctttag aaatcaactg
     2641 gcgaatgggt actggtacaa aatcagggtc gcccaaatat acatcacgat ccgcaaacgc
     2701 aagcctagaa gcgtcgccca agagacgtaa accttcagca tcatacccca cctgattggg
     2761 tgaaaattca tttaaaatcc ccaaaatttg acccacagca atcccacctg agcttggtgc
     2821 acccataccg catacttcat aaatacgata agtcacacaa acaggcgggc gttccaccac
     2881 ttgataatca gataaatctt gtaaggataa ttgaccgggg ttatccttag cattttggac
     2941 aactgaaacg atattttggg catatttacc agtatgcaga gcttttgcac cttgagctgc
     3001 taacgcctga acactgtcag caaattctaa atttttcagc aagctgcctg cttgtagcgg
     3061 cacaccattc ggcaaaaaat aagcggctgt ttttggatag cgtgccaaat gctgctgatt
     3121 ttgctcaacc gagatggcaa gccttggcga cacctcaaag ccttgttttg ccaagcggat
     3181 cggtgtatca aataattttc cccaaggcaa tacaccgtat cgctgatgta ttgtctccat
     3241 cagtttaggg atagcaggcg tacccaccga gcgaccaccg accaccgctt ccataaattt
     3301 caatggttga ccatctttat ccaaaaataa ttccggcgtc gcacgcatcg gtgccgtctc
     3361 acgcccatca aatgtggtca atgttttggc ggtattatcc caatacaaca caaatgcacc
     3421 accgcccaag cctgacgact gtggctctac caagcttagt gtcgtctgca ccgccaccat
     3481 cgcatctgca gcgctaccgc cttgctttaa gatatcatag ccagcttgtg ttgctaatgg
     3541 attggctgac gctaccataa aatcacttgc aatcacctgc ttttgttcga tcagtcccgt
     3601 tgcatgttca ggcgtgtgag cgtctgcacc tgtgatgaca gcagaatgag tattaacctt
     3661 accttgattg gcatggatga cttgacatcc agagattgtc atagacatta tcaatgcagt
     3721 caataaatat gttttagcca caagcactcc ttcgcctgag tttgattgat gattcataca
     3781 aggcatgctg attattgtat ttaatatggc taaataattc aatccaaact atcaatcttg
     3841 accatcaaaa aaagaccgct aatgtcatca gcagtctttt ttgatattta ttttaagata
     3901 ttaagtaatc agacctttgg gctatgctct tcaatgagtg gttttagctc acctgattgg
     3961 tacatttgta ggataatatc actaccaccg attaactcac cattaaccca aagctgtgga
     4021 aaggttggcc gattggcgat gagtggtaga gtactgcgaa tttctgggtt ttctaggata
     4081 ttaacaaaag caaagggtct gccaattggg tcagcacctc tactgcacgc gctgaaaatc
     4141 cacattgggg aaactggggc gtgcctttca
//
LOCUS       DAWITQ010000165         4156 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.165, whole genome shotgun sequence.
ACCESSION   DAWITQ010000165 DAWITQ010000000
VERSION     DAWITQ010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4156)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4156)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4156
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.165"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            337..1854
                     /locus_tag="WIX18_001875"
     CDS             337..1854
                     /locus_tag="WIX18_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ5238935.1"
                     /translation="MLYFRYGFLVVWCAAGVSAAYGADAPAILDDKALLQVQRLVSDK
                     WAESDWKVENDAPRVVDGDFLLAHPKMLEHSLRDALNGNQADLIASLADLYAKLPDYD
                     AVLYGRARALLAKLAGRPAEAVARYRELHGENAADERILLDLAAAEFDDFRLKSAERH
                     FAEAAKLDLPAPVLENVGRFRKKTEGLTGWRFSGGISPAVNQNANNAAPQYCRQNGGR
                     QICSVSRAERAAGLNYEIEAEKLTALADNHYLLFRSNIGGTSYYFSKKSAYDDGFGRA
                     YLGWQYKNARQTAGILPFYQVQLSGSDGFDAKTKRVNNRRLPPYMLAHGVGVQLSHTY
                     RPNPGWQFSVALEHYRQRYREQDRAEYNNGRQDGFYVSSAKRLGESATVFGGWQFVRF
                     VPKRETVGGAVNNAAYRRNGVYAGWAQEWRQLGGLNSRVSASYARRNYKGVAAFSTEA
                     QRNREWNVSLALSHDKLSYKGIVPALNYRFGRTESNVPYAKRRNSEVFVSADWRF"
     gene            complement(1915..3795)
                     /locus_tag="WIX18_001876"
     CDS             complement(1915..3795)
                     /locus_tag="WIX18_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional anthranilate synthase component I
                     family protein/aminotransferase class IV"
                     /protein_id="HEZ5238936.1"
                     /translation="MPYFALFDDAVSGRAKRYQNHVESRFFRPEELDALDSALQKGWQ
                     KGLHSVLFADYGFGLPLTGVESERGGNLALHWFADCADTDAENWLARHSDGLPAGIST
                     PQSSVSEADYLDHIRQIHEAIRRGDTYQINYTTRLHLQAYGNPISLYRRLRQPVPYAV
                     LSHLPDAEGQSAWTLCFSPELFLNLASDGTISTEPMKGTAPILGDGQDERRAAELQAD
                     PKNRAENVMIVDLLRNDLGKIAQTGKVCVPEPFKVSRFGSVWQMTSTIQAQALPHTSF
                     ADILRAAFPCGSITGAPKKMSMQIIETLETEARGLYTGSIGYLNPCSGGLGFEGTFNV
                     VIRTLSLKPASASDGIVSGIGGPDSNVQARTAGQGEATPYRFQVHPLYQGVYGVGSGI
                     VIDSDPAAEYRECGWKARFLNELRPDFGIFETMRVENRQCALLDRHLCRLKAAAQALN
                     LPLPDGCENQIKQYIADLPDGAFRVKALLASDGISLSRAVLNHLADKQRVIISPAVLP
                     AQNYLRRFKTTHRTLFDQAWQTAETQGAFDSLFFNSDGILLEGGRSNVFVKHRGQWLT
                     PSLDLDILNGIMRQAVLDEPQKYLQTNQVIETHITQKTLQEAEEIRLSNALRGVFAAA
                     LA"
BASE COUNT          870 a          935 c         1350 g         1001 t
ORIGIN      
        1 tttgcgggaa tgacggcgac agggttgctg ttatagcgga ttaacaaaaa ccagtacggc
       61 gttgcctcgc ctcagctcaa agagaacgat tctctaaggt gctgaagcac cgagtgaatc
      121 ggtttcgtac tatttgtact gtctgcggct tcgtcgcctt gtcctgattt ttgttaatcc
      181 gctataaatg tgaaatccgc cctttgaaaa tcgggcggcg gttttttgcc tgcctgcttt
      241 cagacggcaa agccggtttt cacgggtttc tgcctgtttt tcggatggtt tgacgtgctt
      301 cggcggcgtg tttgccagaa aggtaaatga cagggtatgt tgtatttcag atacggtttt
      361 ttggttgttt ggtgtgcggc aggtgtttct gccgcctatg gggcggatgc gcccgcgatt
      421 ttggatgaca aggcattgtt gcaggtgcaa cggttggtgt cggataagtg ggcggaatcg
      481 gattggaaag ttgaaaatga tgccccgcgc gtggttgacg gggatttttt gttggcgcat
      541 ccgaaaatgt tggaacatag tttgcgcgac gcgctcaacg gcaatcaggc ggatttaatc
      601 gcttcgttgg cggatttgta tgccaagctg ccggattatg acgcggtttt gtacggcagg
      661 gcgcgggctt tgctggcgaa attggcggga aggccggcgg aggcggtggc gcggtatcgg
      721 gaactgcacg gggaaaatgc ggcagacgag cggattttgc tggatttggc ggcggcggag
      781 tttgacgatt tccgactgaa gtcggcagaa aggcattttg cggaggcggc aaaattggat
      841 ttgccggcac cggttttgga aaatgtgggg cgttttcgga aaaaaacgga ggggctgacg
      901 ggctggcgtt tttcgggcgg catcagtccg gcggtcaatc aaaacgccaa taatgccgcg
      961 ccgcagtatt gccggcaaaa cggaggccgg cagatatgca gtgtcagccg ggcggagcgg
     1021 gcggcagggt tgaattatga aatcgaggcg gaaaaactga cggcgttggc agataatcat
     1081 tatttgttgt tccgttccaa tatcggcggc acgagctatt atttcagtaa aaaatcagct
     1141 tatgacgacg ggttcggcag ggcgtatttg ggttggcagt ataaaaatgc acggcagacg
     1201 gcggggattt tgccgtttta tcaggtgcag ttgtcgggca gcgacggctt tgatgcgaaa
     1261 acaaaacggg taaacaaccg ccgcctgccg ccgtatatgc tggcgcacgg agtcggcgtg
     1321 cagctgtccc atacttaccg accaaacccg ggatggcaat tttcggtcgc gctggaacat
     1381 taccgccaac gctaccgcga acaggatagg gcggaataca ataacggcag gcaggacggg
     1441 ttttatgttt cgtcggcaaa acgtttgggc gaatcggcaa ctgtgttcgg cggctggcag
     1501 tttgtgcggt ttgtgccgaa acgcgaaacg gtgggcggcg cggtcaataa tgccgcctac
     1561 cggcgcaacg gtgtttatgc cggttgggcg caggagtggc ggcagttggg cggtttgaac
     1621 agtcgggttt ccgcgtctta tgcccgccgc aactataagg gcgttgcggc tttctcgaca
     1681 gaggcgcaac gcaaccgcga atggaatgtc tcgctggctt tgagccacga caagttgtcg
     1741 tataaaggta tcgtgcccgc gttgaattat cgtttcggca ggacggaaag taatgtgccg
     1801 tatgcgaaac gccgcaacag cgaggtgttt gtgtcggcgg attggcggtt ttgaatggtg
     1861 gaataatgcc gtccgaactt tgtggaaaca ggttcggacg gcatttttgc gcgttcaggc
     1921 aagggcggcg gcaaatacgc cgcgcaaggc gttggagagg cggatttctt cggcttcttg
     1981 cagtgttttt tgtgtgatgt gtgtttcgat tacttgattt gtttgcaaat atttttgcgg
     2041 ttcgtccaac acggcttggc gcattatgcc gtttaaaatg tctaaatcta aagagggcgt
     2101 gagccattgt ccgcgatgtt tgacgaacac gttgcttctg ccgccttcga gcaggatgcc
     2161 gtctgaattg aaaaacaggc tgtcgaacgc gccttgtgtt tcggcggttt gccacgcttg
     2221 gtcgaagaga gtgcggtggg tggttttgaa gcggcgcagg tagttttgtg cgggcaggac
     2281 ggcgggcgaa atgatgacgc gttgtttgtc agccaaatgg tttaaaacgg cgcgggacag
     2341 gctgatgccg tctgaagcga gcagggcttt gacgcggaac gcgccgtcgg gcaagtcggc
     2401 aatgtattgt ttgatttgat tttcgcagcc gtcgggcagg ggcaggttga gggcttgggc
     2461 ggcggctttc agacggcata ggtggcggtc gagtagggcg cattgcctgt tttccacgcg
     2521 catggtttca aaaatgccga agtcggggcg caattcgttg aggaaacggg ctttccagcc
     2581 gcattcgcga tattcggcgg cgggatcgct gtcgatgacg atgccggaac cgacgccgta
     2641 caccccttga tagagtggat gaacttgaaa ccggtacggc gttgcctcgc cttgccctgc
     2701 cgttcgggct tgcacgtttg aatctgggcc gccgatgcct gaaacaatgc cgtctgaagc
     2761 cgaagcaggt ttgagcgaca aggtgcggat aacgacgttg aacgtgcctt caaaccccaa
     2821 gccgccggaa cacgggttca aatagccaat gctgcccgta taaagtccgc gcgcttcggt
     2881 ttcgagcgtt tcgataatct gcatactcat ttttttgggc gcgccggtga tgctgccgca
     2941 ggggaaggcg gcgcggagga tgtcggcgaa cgaggtgtgc ggcaaggctt gggcttggat
     3001 ggtgctggtc atctgccaga cgctgccgaa acgcgatact ttaaacggct cgggtacgca
     3061 tactttgccg gtttgggcga ttttgccgag gtcgttgcgc agcaaatcga caatcatcac
     3121 gttttcggcg cggtttttcg ggtctgcttg caactcggcg gcgcggcgtt cgtcttgtcc
     3181 gtcgcccaaa atcggcgcgg tgcctttcat cggttcggtg ctgatggtgc cgtctgaagc
     3241 gaggttgagg aagagttcgg gcgagaaaca cagcgtccac gcggattgcc cctccgcatc
     3301 gggcaggtgg gacaagacgg cataggggac gggctggcgc aggcggcggt agaggctgat
     3361 gggattgccg taggcttgca ggtgcaggcg ggtggtgtag ttgatttgat aggtgtcgcc
     3421 gcgccggatg gcttcgtgga tttggcggat atggtcgagg taatcggctt cggatacgga
     3481 ggattgcggc gtggaaatgc cggcggggag gccgtctgaa tgtcgggcaa gccagttttc
     3541 ggcatcggtg tcggcgcagt cggcaaacca gtgcagggca agattgccgc cgcgttcgga
     3601 ctcgaccccc gtcagcggca aaccgaatcc gtagtctgca aacaacaccg aatgcagccc
     3661 tttttgccag cccttttgca gcgcgctgtc caaagcatcg agttcttcgg gacggaaaaa
     3721 acggctttcc acatgatttt gatagcgttt tgcgcggccg cttacggcat cgtcaaacag
     3781 ggcgaaataa ggcatggcaa ttcggggcaa atgttttgat tatacgctct ttttacacat
     3841 attttcagac gattcggcaa atatcggcaa aatgtaattt tatgtagaga aagtgggggg
     3901 cgaaggtgta aaattgtgaa aacaaattcc gatttccaac ctgaaataca ataaggagac
     3961 ctttatgaca gaccaccagc tgcaaccgtt tgaaaacgta gaattaggcg aaaagcaaga
     4021 ccagctccaa gtatagtgga ttaacaaaaa ccagtacagc gttgcctcgc tttagctcaa
     4081 agagaacgat tctctcaggt gctgaagcac caagtgaatc ggttccgtac tatctgtact
     4141 gtcttcggct tcgttg
//
LOCUS       DAWITQ010000166         4142 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.166, whole genome shotgun sequence.
ACCESSION   DAWITQ010000166 DAWITQ010000000
VERSION     DAWITQ010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4142)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4142)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4142
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.166"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            157..414
                     /locus_tag="WIX18_001877"
                     /pseudo
     CDS             157..414
                     /locus_tag="WIX18_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612076.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(467..655)
                     /locus_tag="WIX18_001878"
     CDS             complement(467..655)
                     /locus_tag="WIX18_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HEZ5238937.1"
                     /translation="MTVKYTIFFSTSHHSNQTKATHRHTHVGSTAGQTTIRSGGDTTL
                     KGAQLIGIGIQADPQLQP"
     gene            complement(800..1750)
                     /locus_tag="WIX18_001879"
     CDS             complement(800..1750)
                     /locus_tag="WIX18_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEZ5238938.1"
                     /translation="MYLGIDVSKLTIDCCLIVDGQNYQKKFQNNKGGFEQLINWLQSH
                     KVNDKLHCVCEATGTYYEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKL
                     IAQYCQDRKHKLKAWKPPTKEQKQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQ
                     TTISNLTAQIQIVKKQLLQFYKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFK
                     NARQFTAYLGLDPRKFQSGTSVNGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVG
                     RLKNKGKHIKLILIAIMRKLAVIAFTILQNGQDFQVERYK"
     gene            complement(2376..3461)
                     /locus_tag="WIX18_001880"
     CDS             complement(2376..3461)
                     /locus_tag="WIX18_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zonular occludens toxin domain-containing
                     protein"
                     /protein_id="HEZ5238939.1"
                     /translation="MIYLFTGNMGTGKTSRVVSMILNNEDGLFKMKLEDGTEVDRPLY
                     FCHIDGLDKRQFKAHELTEEQIMSAPLRDVIPEGAVLIVDEAHYTYPVRAAGRPVPPY
                     IQELTELRHHGHTVILMTQHPSQLDIFVRNLVSKHVHLERKAIGMKQYYWYKCVTSLD
                     NPAGVSGVEVASWKPPKEAFKYYKSASQHQKFKKKVPWAVWALIAIVGFVGWKSYGIF
                     KVYSKATDSRIEQEAQKESVVQTMTEQPASSEEMPLKNSDNLKPEDFVPTLPEKPESK
                     PIYNTVRQVKTFEQIAGCIDGGKSDCTCYSNQGTPLKEITKIMCKEYVKNGLPFNPYK
                     DEQQRTEQVEQSAKADKPQVLVMGGKP"
     gene            complement(3471..3761)
                     /locus_tag="WIX18_001881"
     CDS             complement(3471..3761)
                     /locus_tag="WIX18_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2523 domain-containing protein"
                     /protein_id="HEZ5238940.1"
                     /translation="MPLLAGLIPLLGILLKMLIVRIILATGLTFVTYAGYLIALEKFK
                     DYTSNAINSMPSDILNLLLISGFGQGLGYLFGAFSFFIGMHAFKKLTFVFPG"
     gene            complement(3762..>4142)
                     /locus_tag="WIX18_001882"
     CDS             complement(3762..>4142)
                     /locus_tag="WIX18_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T cell/B cell stimulating protein TspB"
                     /protein_id="HEZ5238941.1"
                     /translation="TRPDSPAVPDRPNGRHRKERKEGEDGGLLCDYFPEILACQEMGK
                     PSDGMFHDISIPQVIDDKTWSSHNFLPSNGVCPQPKTFHVFGRQYQASYEPLCVFAEK
                     IRFAVLLAFIIMSAFVVFGSLKGK"
BASE COUNT          981 a          903 c          906 g         1352 t
ORIGIN      
        1 agaaagaacg caactcgtcg cagggttaag gcaatgccat ccgttgaact gctgttggtg
       61 attgtcggac tgccacgcgg caccttctat taccaattgg ttgtccaatc ggcagaagac
      121 aaatatgccg atttgaaacg gcatatccat gatatttatc aaaagcagtt gaaagacaac
      181 ggtctggttc agagtatgtc ccgcaaggga aactgcttgg acaatgcggc aatggaaagt
      241 ttcttcggaa cgttgaaatc ggaatgtttc catacgtgca aatatgattc cgttaccgaa
      301 ttggaagctg tactgcacga atatatccgt tactacaaca acgatagaat caagttgaaa
      361 ttaaaaggac tgagccctgt tcagtacaga attcagtccc tgaaagccgc ttgattaaac
      421 tgtccaactt ttgggggtca gttaatatcg gttccaccaa tagtcgtcag ggttgtagtt
      481 gggggtctgc ctgtatgcct atgccgataa gctgagcacc tttgagggtg gtatccccgc
      541 cgcttcggat ggtggtttgt ccggccgtac tgccgacatg ggtgtggcgg tgggttgctt
      601 ttgtctgatt gctgtggtgg cttgttgaaa aaaagatagt gtatttcacg gtcaaataac
      661 tttacatttc ttgaagttgc aagaatgcgc accccgactt tttcgggatg tttgtttcgt
      721 tttgaatgga tttgatgttt taatttatac tttattttca ataaattgaa aatcaccggc
      781 gaaagcccag tttaattttt tatttatatc tttccacttg gaaatcttgg ccgttttgca
      841 aaatcgtaaa cgctattacc gccagtttcc gcatgatggc aattaatatc aattttatat
      901 gcttcccttt atttttcaga cgccctacaa attcagggaa ggcattacaa cgatatgcaa
      961 caagtgcagg catataaagg cttttcctta tttccgaact tcctattttt gatattctgc
     1021 tttttccgtt cacgcttgtt cctgattgaa attttctagg gtctaggcct agataagccg
     1081 tgaactgtct tgcattttta aattcatgtc ttttataggt tgatagcaat actgctgtcg
     1141 cttgctcgcc tatgcctgtt attgttttca gccttttgcg tagattgtta taacttggat
     1201 tgtctttgta gaactggagt aattgctttt tgactatctg tatttgtgct gtcaggtttg
     1261 aaatagttgt ttgaatatgg gatttgatat agtcgggtgc ttcgtgttgt ttagcttttt
     1321 ctgttgcgcg ttgctgtttc agatagtcta aatatcgggc gatttcctgt aattgcttct
     1381 gttcttttgt cggcggtttc catgctttta atttgtgctt tcggtcttgg caatattggg
     1441 ctatcaactt tgcgtcttgt gtatctgttt ttgatcgttg tagttctgct atcgcatatc
     1501 cttttatctt tcgtggattc tctacggtaa ttgtatatct tgaataaaga tattcggcta
     1561 atgcttcgta atatgtgcct gttgcttcgc acacgcaatg gagcttatcg tttactttat
     1621 gactttgtag ccaatttatt aattgttcaa atcctccttt gttgttctga aacttctttt
     1681 gataattttg accgtctaca atcaaacagc aatctattgt gagctttgaa acgtctattc
     1741 ctaagtacat ggtttaacct tattaattcg ggctttttgc cctagatagt gttcaaactt
     1801 aagatgtacg aaagcccacg cttctatctt tcttacaagc tgtacgcttt ggccgtactt
     1861 tcgaagtcgt gggctttact tggtgtttcg tcaaacgcca agccctcaat gggctgattt
     1921 actcattcag ggcttgaagc ttatcgcctt tgccgtatct gattttattg gggtcgcagg
     1981 ttttggtaaa ggtttctgtt gcgacccgaa tgtctgattt tttttgggcg tatctcagtc
     2041 tggaatcact ccgttcgggg gtttccggta ttgaaaaaca gttcataaaa aaggaaaagg
     2101 gggtattcat aaagattggg taaaaagcgc gcccaatctt tacaaagctt cccccttttc
     2161 cttttttctg ccctattttc ctgcacctac aacccccgaa cgaagcgatt ccagactgag
     2221 acactttaaa aaaaacagcc attctagcaa ttaaccccct tcactcagct caagccatcc
     2281 tgaggggtag ggattgaact ttctgcttta cgactccgcc gccaattcct tcaaacggtt
     2341 ttccgcgctc ttcagttgtc gtacatgaga ttttgctacg gctttccgcc cattacgaga
     2401 acttgcggct tgtccgcttt cgcggactgt tccacctgtt ccgtcctttg ctgttcgtcc
     2461 ttataaggat tgaaaggcaa cccgtttttc acatattctt tacacattat ctttgttatt
     2521 tctttcaagg gtgttccttg atttgaatag catgtgcaat ctgattttcc gccgtctata
     2581 catccggcga tttgctcaaa ggtttttact tgtcggactg tgttataaat aggcttgctt
     2641 tcgggctttt cgggtaaagt cggcacaaag tcttcaggtt tcaaattgtc tgaatttttt
     2701 aaaggcattt cctctgatga tgcaggctgc tccgtcatcg tctgcacaac gctttctttt
     2761 tgcgcttcct gctcaatccg gctgtctgtg gctttgctgt aaactttaaa aatgccgtaa
     2821 cttttccagc ctacaaaccc tacaatcgca atcaacgccc aaaccgccca aggtactttt
     2881 ttcttgaact tttggtgctg gcttgctgat ttatagtatt taaaggcttc tttcggcggt
     2941 ttccaacttg cgacttctac gccgcttacg cctgcgggat tgtccaacga ggttacgcat
     3001 ttataccaat aatactgttt cattccgatt gccttgcgtt caaggtgtac atgctttgaa
     3061 acaaggttgc ggacgaatat atcaagttgg ctcgggtgct gcgtcatcaa aataacggta
     3121 tgcccgtgat ggcggagttc tgtcagttcc tgaatataag gcggaacggg acggcctgcc
     3181 gcgcgtaccg gataagtgta gtgcgcttcg tcaacaatca gcactgcgcc ttccggtatg
     3241 acatcacgaa gcggggcgga catgatttgc tcttccgtca gttcgtgggc tttaaactgc
     3301 cgtttatcca atccgtcgat atggcagaaa taaagcggtc tgtctacctc tgtgccgtct
     3361 tccaatttca ttttgaacaa tccgtcttcg ttgttcaaaa tcatagagac gacgcgggag
     3421 gttttgcctg tccccatgtt tcctgtaaac agataaatca tgcttctacc tcatcctgga
     3481 aagacaaacg tcagtttttt gaatgcgtgc ataccaatga agaacgagaa tgcgccgaac
     3541 aggtagccca acccctgacc gaatcccgaa attaaaagaa ggttcagtat gtcggaaggc
     3601 atggaattga tcgcatttga cgtgtagtct ttgaactttt ccagcgcgat gagatacccg
     3661 gcataggtta caaatgtcag acctgttgca aggattattc tgacaatcag cattttcaga
     3721 agtatgccta aaagtggaat cagaccggca agtaatggca tttatttccc cttcaacgaa
     3781 ccgaaaacga caaaagccga cataatgata aaggcgagca gtacggcaaa acggattttt
     3841 tcggcaaaca cgcataacgg ctcatagctt gcctgatatt gcctaccgaa aacatgaaag
     3901 gttttcggct gcggacatac gccgttagac ggtaaaaagt tatgtgaaga ccatgtttta
     3961 tcgtctataa cctgcggtat gcttatatcg tgaaacatgc cgtctgaagg tttgcccatc
     4021 tcctgacagg ctaggatttc cggaaaataa tcgcacaaaa gcccgccgtc ttcgccttct
     4081 ttcctttctt tgcgatgcct accgtttggg cggtccggaa cggcggggga atcgggtctt
     4141 gt
//
LOCUS       DAWITQ010000167         4128 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.167, whole genome shotgun sequence.
ACCESSION   DAWITQ010000167 DAWITQ010000000
VERSION     DAWITQ010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4128)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4128)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4128
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.167"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            43..675
                     /locus_tag="WIX18_001883"
     CDS             43..675
                     /locus_tag="WIX18_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HEZ5238942.1"
                     /translation="MENTNRVPEQARYDAERRQADEALAGVFPAVSIFGSARTPQNHA
                     DYAFACRLARRLSDSGIAVISGGGPGIMEAANKGAFAGKSVSVGLNIVLPHEQKPNPY
                     QDIALRFSRFAERKAVFFRYSQAYVVMPGGFGTLDELFEILTLVQTGKVPPRPIVLVG
                     KAFWSGLAEWINAQLLARGLISEGAVSLFAISDDEDEIVAYLSEHGLQTA"
     gene            747..2117
                     /gene="purB"
                     /locus_tag="WIX18_001884"
     CDS             747..2117
                     /gene="purB"
                     /locus_tag="WIX18_001884"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEZ5238943.1"
                     /translation="MINPIASLSPLDGRYAQSVEALRPIFSEYGLMKARVKVELNWLK
                     ALAAEPKIAEVPPFSAETLAEIDTVIENFSLEDAAAVKAIEATTNHDVKAIEYWLKKR
                     FAEVPEVAAVSEFIHFACTSEDINNLSHALMLQEAREAVLLPKLAEIIEKLTAMAHDL
                     AAVPMMSRTHGQPATPTTLGKETANVVYRLQRQFKNLQAQEFLGKINGAVGNYNAHMV
                     AYPDVDWETHCRNFVEISLGLTFNPYTIQIEPHDYMAEFFQTLSRINTILIDFNRDVW
                     GYISLGYFKQKVKAGEVGSSTMPHKVNPIDFENSEGNLGMANAVLGFLSEKLPISRWQ
                     RDLTDSTVLRNMGVGVGYAVLGFAAHLRGLNKLEPNPAALAADLDATWELLAEPIQTV
                     MRRYGVANPYEKLKDLTRGKGGITPEVLKGFIGLLEIPAEAKAKLLELTPALYVGKAE
                     ALAKRI"
     gene            2198..4066
                     /locus_tag="WIX18_001885"
     CDS             2198..4066
                     /locus_tag="WIX18_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEZ5238944.1"
                     /translation="MQAVRYRPEIDGLRAVAVLSVMIFHLNNRWLPGGFLGVDIFFVI
                     SGFLITGIILSEIQNGSFSFRDFYTRRIKRIYPAFIAAVSLASVIASQIFLYEDFNQM
                     RKTVELSAVFLSNIYLGFQQGYFDLSADENPVLHIWSLAVEEQYYLLYPLLLIFCCKK
                     TKSLRVLRNISIILFLILTATSFLPSGFYTDILNQPNTYYLSTLRFPELLAGSLLAVY
                     GQTQNGRRQTANGKRQLLSSLCFGALLACLFVIDKHNPFIPGMTLLLPCLLTALLIRS
                     MQYGTLPTRILSASPIVFVGKISYSLYLYHWIFIAFAHYITGDKQLGLPAVSAVAALT
                     AGFSLLSYYLIEQPLRKRKMTFKKAFFCLYLAPSLILVGYNLYARGILKQEHLRPLPG
                     APLAAENHFPETVLTLGDSHAGHLRGFLDYVGSREGWKAKILSLDSECLVWVDEKLAD
                     NPLCRKYRDEVEKAEAVFIAQFYDLRMGGQPVPRFEAQSFLIPGFQARFRETVKRIAA
                     VKPVYVFANNTSISRSPLREEKLKRFAANQYLRPIQAMGDIGKSNQAVFDLVKDIPNV
                     HWVDAQKYLPKNTVEIHGRYLYGDQDHLTYFGSYYMGREFHKHERLLKSSHGGALQ"
BASE COUNT          942 a         1119 c         1070 g          997 t
ORIGIN      
        1 tttttgacgg tgtacaatcg ctgtttttga acggaggatg gaatggagaa tacaaaccgt
       61 gtgccggagc aggcacgtta tgatgccgaa cgcaggcagg cagacgaagc attggcgggc
      121 gtgtttccgg cagtcagtat cttcggcagc gcgcgcacgc cgcagaatca tgcggattat
      181 gcgttcgcct gccgtctggc gcggcggctg tcggattcgg gcattgccgt catttcgggc
      241 ggcgggccgg ggattatgga ggcggcaaac aagggcgcgt ttgcagggaa gtcggtttcg
      301 gtggggctga acatcgtttt gccgcacgag cagaaaccga atccgtatca ggacatcgcc
      361 ttgcggtttt cccgttttgc cgaacgcaag gcggtgtttt tccgctattc ccaagcatat
      421 gtcgtgatgc cgggcggctt cgggacgctg gacgaattgt ttgaaatcct gaccttggtg
      481 cagacgggca aagtgccgcc gcgtccgatt gttttggtcg gaaaggcgtt ttggtcgggc
      541 ttggcggagt ggataaacgc gcagcttttg gcgcgcggtc tgatttccga aggggcggtc
      601 tctttgtttg ccatatcgga cgatgaagac gaaatcgttg cgtatctgtc ggaacacggg
      661 cttcagacgg catagcgtcc tgagagtgat gtataattgc aaacaattta acaatttttg
      721 atgtctttcc cgaacaggat gccgaaatga tcaaccccat cgcctcgctt tcccctttag
      781 acggccgtta tgcccaatcc gttgaagcat tgcgcccgat tttttccgaa tacggcctga
      841 tgaaagcgcg cgtcaaagtc gaattaaact ggctcaaagc cctcgccgcc gagccgaaga
      901 ttgccgaagt gccgcccttc agtgccgaaa cgcttgccga aatcgacacg gtgattgaaa
      961 acttttcatt ggaagacgcg gccgccgtca aagccatcga agccacgacc aatcatgatg
     1021 tcaaagccat tgaatattgg ctgaaaaaac gttttgccga agtgccggaa gtcgccgccg
     1081 tgagtgagtt catccacttc gcctgcacca gcgaagacat caacaacctg tcccacgctt
     1141 taatgctgca agaagcgcgt gaggctgttt tgctgccgaa gctggccgaa atcatcgaaa
     1201 aactgaccgc tatggcgcac gaccttgccg ccgtcccgat gatgagccgc acccacggcc
     1261 agcccgccac gccgaccact ttgggcaaag aaaccgccaa tgtcgtgtac cgcctgcaac
     1321 gccagtttaa aaacctgcaa gcgcaagagt tcctcggcaa aatcaacggc gcggtcggca
     1381 actacaacgc ccatatggtc gcctatcctg atgtagattg ggaaacccac tgccgcaact
     1441 tcgtcgaaat cagcctcggt ctgaccttca acccctacac catccaaatc gagccgcacg
     1501 actatatggc ggaattcttc caaaccctca gccgcatcaa cacgattctg atcgacttta
     1561 accgcgacgt ttggggttat atttcattgg gttacttcaa acaaaaagtc aaagcgggcg
     1621 aagtcggctc atcgaccatg ccgcacaaag tcaaccccat cgactttgaa aactccgagg
     1681 gcaacctcgg tatggccaat gccgtattgg gctttttgtc cgaaaaactg ccgatttccc
     1741 gctggcagcg cgacctgacc gacagcaccg tattgcgcaa tatgggcgtg ggcgtgggct
     1801 atgccgtgtt gggtttcgcc gcccacctgc gcggtctgaa caagctcgaa cccaaccctg
     1861 ccgcgcttgc cgctgatttg gatgccactt gggaactgct cgccgagccg attcaaaccg
     1921 tgatgcgccg ttacggtgtc gccaatcctt acgaaaaact gaaagacctg acgcgcggca
     1981 aaggcggcat cacgcccgaa gtgctgaaag gctttatcgg attgctggaa atccccgccg
     2041 aagccaaagc caaattgctt gagctgaccc ccgcgctgta tgtgggcaag gctgaagcgt
     2101 tggcgaaacg gatttgagcg tttactgaaa ccgatgccgt ctgaacgcgc gttcagacgg
     2161 catttttaag ataacgggac atacgggggc gatatttatg caagctgtcc gatacagacc
     2221 ggaaattgac ggattgcggg ccgtcgccgt gctatccgtc atgattttcc acctgaataa
     2281 ccgctggctg cccggaggat tcctgggggt ggacattttc tttgtcatct caggattcct
     2341 cattaccggc atcattcttt ctgaaataca gaacggttct ttttctttcc gggattttta
     2401 tacccgcagg attaagcgga tttatcctgc ttttattgcg gccgtgtcgc tggcttcggt
     2461 gattgcctct caaatcttcc tttacgaaga tttcaaccaa atgcggaaaa ccgtggagct
     2521 ttctgcggtt ttcttgtcca atatttatct ggggtttcag caggggtatt tcgatttgag
     2581 tgccgacgag aaccccgtac tgcatatctg gtctttggca gtagaggaac agtattacct
     2641 cctgtatcct cttttgctga tattttgctg caaaaaaaca aaatcgctac gggtgctgcg
     2701 taacatcagc atcatcctat ttctgatttt gactgccaca tcgtttttgc caagcgggtt
     2761 ttataccgat attctcaacc aacccaatac ttattacctt tcgacactga ggtttcccga
     2821 gctgttggca ggttcgctgc tggcggttta cgggcaaacg caaaacggca gacggcaaac
     2881 agcaaatgga aaacggcagt tgctttcatc actctgcttc ggcgcattgc ttgcctgcct
     2941 gttcgtgatt gacaaacaca atccgtttat cccgggaatg accctgctcc ttccctgcct
     3001 gctgacggca ctgcttatcc ggagtatgca atacgggaca cttccgaccc gcatcctgtc
     3061 ggcaagcccc atcgtatttg tcggcaaaat ctcttattcc ctatacctgt accattggat
     3121 ttttattgct ttcgcccatt acattacagg cgacaaacag ctcggactgc ctgccgtatc
     3181 ggcggttgcc gcgttgacgg ccggattttc cctgttgagt tattatttga ttgaacagcc
     3241 gcttagaaaa cggaagatga ccttcaaaaa ggcatttttc tgcctctatc tcgccccgtc
     3301 cctgatactt gtcggttaca acctgtacgc aagggggata ttgaaacagg aacacctccg
     3361 cccgttgccc ggcgcgcccc ttgctgcgga aaatcatttt ccggaaaccg tcctgaccct
     3421 cggcgactcg cacgccggac acctgcgggg gtttctggat tatgtcggca gccgggaagg
     3481 gtggaaagcc aaaatcctgt ccctcgattc ggagtgtttg gtttgggtag atgagaagct
     3541 ggcagacaac ccgttatgtc gaaaataccg ggatgaagtt gaaaaagccg aagccgtttt
     3601 cattgcccaa ttctatgatt tgaggatggg cggccagccc gtgccgagat ttgaagcgca
     3661 atccttccta atacccgggt tccaagcccg attcagggaa accgtcaaaa ggatagccgc
     3721 cgtcaaaccc gtctatgttt ttgcaaacaa cacatcaatc agccgttcgc ccctgaggga
     3781 ggaaaaattg aaaagatttg ccgcaaacca atatctccgc cccattcagg ctatgggcga
     3841 catcggcaag agcaatcagg cggtttttga tttggttaaa gatatcccca atgtgcattg
     3901 ggtggacgca caaaaatacc tgcccaaaaa cacggtcgaa atacacggac gctatcttta
     3961 cggcgaccaa gaccacctga cctatttcgg ttcttattat atggggcggg aattccacaa
     4021 acacgaacgc ctgcttaaat cttcccacgg cggcgcattg cagtagcctg ccttcttgtc
     4081 ggatattgcc tttggcagcc tatgccgctg tttgccgttc ggggcggc
//
LOCUS       DAWITQ010000168         4058 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.168, whole genome shotgun sequence.
ACCESSION   DAWITQ010000168 DAWITQ010000000
VERSION     DAWITQ010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4058)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4058)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4058
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.168"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(1169..1606)
                     /gene="rnhA"
                     /locus_tag="WIX18_001886"
     CDS             complement(1169..1606)
                     /gene="rnhA"
                     /locus_tag="WIX18_001886"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HEZ5238945.1"
                     /translation="MDKTVYLYTDGACKGNPGAGGWGVLMRYGSREKELFGGEAQTTN
                     NRMELTAVIEGLKSLKRRCTVIICTDSQYVKNGMENWIHGWKRNGWKTAAKQPVKNDD
                     LWKELDVLVGQHQVSWTWVKGHAGHAENERADDLANRGAAQFS"
     gene            1720..2589
                     /gene="tehB"
                     /locus_tag="WIX18_001887"
     CDS             1720..2589
                     /gene="tehB"
                     /locus_tag="WIX18_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase TehB"
                     /protein_id="HEZ5238946.1"
                     /translation="MKEWIVGQSGELFCFGQMPVWKAENLPEVLLSGYSSEGGEWVCL
                     NVLQGDVEVRTQDGAAEVWSAESGDCVFAPQQVFSVKPKTDDAEIRLSMYCVAEDYFH
                     KKYGMSATHSAVAAAQDIVPAGRALDMGCGQGRNALFLGLKGFEVTAVDHNPAALANV
                     AELAEAEGLNVRTLEYDLNAAALQGEFDYIVATVVLMFLMPQRVPDVIADMQAHTAAG
                     GYNLIVSAMDTADFPCPMPFPFKFKEGELKDYYRDWELVEYKEELGAMHAKDENGNPI
                     RFKFVTMLAKRPE"
     gene            complement(2639..3445)
                     /gene="thiD"
                     /locus_tag="WIX18_001888"
     CDS             complement(2639..3445)
                     /gene="thiD"
                     /locus_tag="WIX18_001888"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEZ5238947.1"
                     /translation="MKSSFVQTLTIAGSDSGGGAGIQADLKTFQMRGVFGTCVITAVT
                     AQNTLGVSAVHLVPTETITAQIQAIREDFDIRAYKIGMLGTAEIIECVADKLKHCDFG
                     RRVLDPVMIAKGGAPLLQDSAVAALTRLLLPDTDVLTPNLPEAEALTGVHIENRKDAE
                     RAAKILLDYGVKNVVIKGGHLNGSSSGRCTDWLFTQNETLELDSPRFPTAHTHGTGCT
                     FSACITAELAKGSDVCEAVQTAKAYITAAISNPLEIGAGHGPVNHWAYRD"
BASE COUNT          871 a         1011 c         1141 g         1035 t
ORIGIN      
        1 ggtttttgtt aatccactat agtttaattt gtctgtccgc attgccgcta attgtaccac
       61 ttcatcgtat ttccttttcg gttgaaaccc cgccctttag ggcggcagga tcagacttta
      121 tttgggaggg ggtgtaaccc cttccaaatc aggacgacac atagggaggt gctttatgtg
      181 tcgtcctgtg tgttgaaata tatcggacgc gtttgaacag ttgtgcggca aactgtttta
      241 gcggcaggca agagatgccg tctgatgccg tctgaagccc attgtccgtc attcccacac
      301 aggcagttgc tacggttgct gaagcccctt agccgtcgcg caggcggttg ctacggttac
      361 taaaatcccg tcattcccgc gcaggcggga atccagtccg ttcggtttca gttgtttctg
      421 ataaatcttg cagcgttggg tttttagatt cccgctttcg cgggaatgac ggggcggtcg
      481 gatgccgcct gaaactccgt cattcttgca acttttcgtc attcccgtga aagcgggaat
      541 ctagaccttt taaattttca cacggctttt gaatattgcc gttacccgaa ggtctagatt
      601 cccgcttgcg cgggaatgac ggtagagcgg tttcagttgc tcccgataaa tgccgcaatc
      661 tcaaatcccg tcattccctc aaaaacagaa aaacaaaatc agaaacctaa aatcccgtca
      721 ttcccgcagc tcttcgtcat tcccgtgaaa gcgggaatct agacctttta aattttcaca
      781 cggcttttga atattgccgt tacccgaagg tctggattcc cgcctgcacg ggaatgacgg
      841 cagagcggtt tcagttgttt ctaaataaat ttttgcagcg ttggattttt agattcccgc
      901 tttcgcggga atgacggggc ggtcggatgc cgcctgaagc ccgacaaagc ccccaatgcc
      961 gtctgaaacc tcgtcattcc tctgctgtcc gcaacttttc gtcattcccg caaaagcggg
     1021 aatctagagc ctctaaattt tcagacggct tttgaatatt gccgttgccc gacggtttgg
     1081 attcccgcct gcgcgggaat gacggtggag gacgatgccg tctaaagccc attagcggtt
     1141 tcagacggca tttttgccgg agcggcagtc aggaaaactg cgctgcgcca cggtttgcca
     1201 aatcgtcggc gcgttcgttt tccgcgtgtc ccgcgtgtcc tttaacccaa gtccagctga
     1261 cttggtgctg cccaaccaga acgtcgagtt ctttccacaa gtcgtcgttt ttgacgggct
     1321 gtttggcggc ggttttccag ccgttgcgct tccaaccgtg tatccagttt tccatgccgt
     1381 ttttgacgta ttgcgagtcg gtgcagatga tgacggtgca gcggcgtttg agcgatttca
     1441 gtccttcgat gacggcggtc agctccatgc ggttgttggt ggtttgcgct tcgccgccga
     1501 aaagttcttt ttcgcggctg ccgtagcgca tcaacacgcc ccagccgccc gcgccgggat
     1561 tgcctttgca cgcgccgtcg gtgtaaaggt aaacggtttt gtccattatt gtgcctttgt
     1621 gtggtgtccg gcgtgattat aagcggtttg tgcgccgtgc cgtctgaaag attgcggcgg
     1681 attaaaatag gcatataatg tgcaacttta tttttgaata tgaaggagtg gatagtgggt
     1741 caaagcggcg agttgttttg tttcggacag atgcccgtat ggaaggcgga aaacctgccg
     1801 gaagttttgt tgtcgggcta ttcgtccgaa ggaggggaat gggtctgcct gaatgtgttg
     1861 cagggcgatg tcgaagtccg cacgcaggac ggggcggcgg aggtttggtc ggcagaaagc
     1921 ggcgattgcg tgtttgcgcc gcagcaggtg ttttcggtca aaccgaaaac ggacgatgcc
     1981 gaaatccgtt tgtcgatgta ttgtgtggcc gaagattatt tccacaaaaa atacggcatg
     2041 agtgccacgc attctgcagt ggcggcggct caggatatcg tacctgcggg cagggcgctc
     2101 gatatgggct gcgggcaggg gcgcaacgcg ctgtttctcg gtttgaaggg gtttgaagtt
     2161 actgcagtcg atcacaatcc cgccgccttg gcaaacgtgg cggagctggc agaggcggag
     2221 ggtttgaacg tccgcacgct ggaatatgat ttgaacgccg ccgccttgca gggcgagttt
     2281 gattatattg tggcaacagt ggtgctgatg ttcctgatgc cgcagcgcgt acccgacgtg
     2341 attgccgata tgcaggcgca tacggcggcg ggcgggtaca acttgattgt atcggcaatg
     2401 gatacggcgg atttcccctg cccgatgccg ttccccttca aatttaaaga gggagaactg
     2461 aaggattatt atcgggattg ggagctggtc gaatataaag aagaattggg cgcgatgcac
     2521 gccaaagacg aaaacggcaa tccgatacgg tttaaatttg taaccatgct ggcgaaaagg
     2581 cctgaataat cttcaaaaat gccgtctgaa cattttgttt cagacggcat ttttacggtt
     2641 agtcccgata cgcccaatga ttgaccggcc cgtgtcccgc gccgatttcc aaagggtttg
     2701 agattgccgc cgtgatatag gccttggcag tctgtacggc ttcgcaaacg tccgagcctt
     2761 ttgccaattc agcggtaatg caggcggaaa acgtgcagcc tgtgccgtgc gtgtgggcgg
     2821 tcggaaagcg cgggctgtcc aattccagcg tttcgttttg cgtaaacagc caatccgtgc
     2881 agcgtccgct gctgctgccg ttcaaatgtc cgcctttgat aacgacattt ttgacaccgt
     2941 aatcaagcag gatttttgcc gcacgttccg catctttacg gttttcgata tgcacgccgg
     3001 tcagggcttc cgcctcgggc aggttggggg tcaatacatc cgtatcggga agcagcaggc
     3061 gcgtcagtgc cgcaacggcg gaatcctgca acagcggcgc accgcctttg gcaatcatca
     3121 cagggtcgag tacgcgcctg ccgaagtcac agtgtttcag cttgtcggca acgcattcga
     3181 tgatttccgc cgtgccgagc attcctattt tgtaggcgcg gatgtcaaag tcttccctga
     3241 ttgcttggat ttgtgcggtg atggtttcgg tcgggacgag atgaaccgcc gacacgccca
     3301 aggtattttg cgcggtaacg gcggtgatga cgcacgttcc gaacacgccg cgcatctgaa
     3361 acgttttcaa atccgcctga atgcccgcac cgccgcccga atccgaaccg gcgatggtaa
     3421 gcgtttgcac aaaagagctt ttcatttgtt cctccttaat attgtgtccg ataaaaaggg
     3481 ctaatgcctg taaaaaagca cggcgatgcc gtctgaaaac cgcagcgcgg ggtttgtggt
     3541 gcattatatg ccgtattgca ggacaaggca cagggcaggg cggcggggtg catcgtagca
     3601 actgtatttt tgcccgacgg ggtgaaaaat acagttgcta cacccactga taatgaaaaa
     3661 agagagcaat gccgtctgaa ccgcgtgttg cggcgagcat aaaccggcac gctttattcg
     3721 tcattcccac aaaaacagaa acctaaaatt ccgtcattcc tacgaaagcg ggaatccagt
     3781 gtgttcggtt tcagttgttt ttgggtttcg ggtgatttcc aaatcatcat tcccgcgcag
     3841 gcgggaatct agcccttggg gcagcggcaa tatttataaa gccgtctgaa aattcagaag
     3901 ttctagattc ccgttttcac gggaatgacg aagggttgtg ggaatgacga agtttcagac
     3961 ggcatcgccc cgccccgtca ttcccgcata agcgggaatc caaaccattg ggcagagcag
     4021 ccttaaaggt tataaaagac tcgtcattcc cacgaaag
//
LOCUS       DAWITQ010000169         4003 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.169, whole genome shotgun sequence.
ACCESSION   DAWITQ010000169 DAWITQ010000000
VERSION     DAWITQ010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4003)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4003)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4003
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.169"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..632)
                     /locus_tag="WIX18_001889"
     CDS             complement(<1..632)
                     /locus_tag="WIX18_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEZ5238948.1"
                     /translation="MGRHFGRRRFLTVAAVAAAGAAVSFLPNPFAADDEKRNKDEKHN
                     ENVFFWKGVALGSGAELRLFGVDDRQAADLVNKVLAEVARLEKMFSLYREDSLISRLN
                     RDGYLTSPSADFLELLSLCRDIHALTEGAFDPTVQVLWKLYADYFSAHPDAETPPPEN
                     SVKEALKRVGFGKVSFDDREIRFTEKGMGLSLNGIAQGYSGLTKTSTALPR"
     gene            complement(641..1435)
                     /locus_tag="WIX18_001890"
     CDS             complement(641..1435)
                     /locus_tag="WIX18_001890"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HEZ5238949.1"
                     /translation="MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPL
                     LTTKKLHLRSIIHELLWFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWP
                     APDGRHIDQIANVVEQIKKNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLS
                     CQLYQRSADIFLGVPFNIASYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAAL
                     QLEREPRALPVMKINPEVKDLFAFKFEDFELEGYDPHPHIKAAVSV"
     gene            1858..3192
                     /gene="gdhA"
                     /locus_tag="WIX18_001891"
     CDS             1858..3192
                     /gene="gdhA"
                     /locus_tag="WIX18_001891"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HEZ5238950.1"
                     /translation="MTDLNTLFANLKQRNPNQEPFHQAVEEVFMSLDPFLAKNPKYTQ
                     QSLLERIVEPERVVMFRVTWQDDKGQVQVNRGYRVQMSSAIGPYKGGLRFHPTVDLGV
                     LKFLAFEQVFKNALTTLPMGGGKGGSDFDPKGKSDAEVMRFCQAFMTELYRHIGADTD
                     VPAGDIGVGGREIGYLFGQYKKIRNEFSSVLTGKGLEWGGSLIRPEATGYGCVYFAQA
                     MLQTRNDSFEGKRVLISGSGNVAQYAAEKAIQLGAKVLTVSDSNGFVLFPDSGMTEAQ
                     LAALIELKEVRRERVATYAKEQGLQYFENQKPWGVAAEIALPCATQNELDEEAAKTLL
                     ANGCYVVAEGANMPSTLGAVEQFIKAGILYAPGKASNAGGVATSGLEMSQNAIRLSWT
                     REEVDQRLFGIMQSIHESCLKYGKVGDTVNYVNGANIAGFVKVADAMLAQGF"
     gene            3334..3708
                     /locus_tag="WIX18_001892"
     CDS             3334..3708
                     /locus_tag="WIX18_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238951.1"
                     /translation="MIMDQYYMELKNKLSNRPILLDNTNDFLFVLVNTVKAMIENTDK
                     SQLSELDKILDGVTSQELKLAYDFCQGKFGQAGFSYRRHPNYFYLSSLIATFPEFELS
                     KADRDYLKGIINFDNYLLYELD"
     gene            3752..>4003
                     /locus_tag="WIX18_001893"
     CDS             3752..>4003
                     /locus_tag="WIX18_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone acetyltransferase"
                     /protein_id="HEZ5238952.1"
                     /translation="MIELKLVDESSFQAVLDLKISEADERARFVAPNVRSLADAWLYR
                     ENEDVFPRAIYWDKQVVGFLLLEIDKDEAEYFIWRIMIGQ"
BASE COUNT         1089 a         1045 c          936 g          933 t
ORIGIN      
        1 cgaggcaacg ccgtactggt ttttgttaat ccactatagc cttgcgcgat gccgttcaag
       61 gacaaaccca tacccttttc ggtaaaacgg atttcacggt cgtcaaacga gactttgccg
      121 aagccgaccc gcttcagggc ttccttcacg ctattctccg gcggcggcgt ttccgcatcg
      181 ggatgggcgg aaaaataatc ggcatacagt ttccacaaaa cctgaaccgt cggatcgaac
      241 gcgccttccg tcagcgcgtg aatatcgcgg cacaggctca acagttccaa aaaatccgcc
      301 gacggcgaag tcagataacc gtcacggttc aggcggctga tcaggctgtc ttcacggtaa
      361 aggctgaaca ttttttccaa acgcgccact tccgccaaaa ccttattgac caaatccgcc
      421 gcctgtctgt cgtccacgcc gaacagacgc agctccgcac cggaacccag cgcgacacct
      481 ttccagaaaa acacattttc attgtgtttt tcatctttat tgcgtttttc atcatcggcg
      541 gcaaaaggat tcggcaaaaa agaaaccgcc gcgcccgccg ccgcaacggc ggcaactgtc
      601 aaaaaacgcc tgcgcccgaa atgcctgccc ataccgcctc ctaaaccgac actgccgcct
      661 tgatgtgcgg atgcggatcg tagccttcca actcaaaatc ttcaaatttg aaggcaaaca
      721 aatctttgac ttcaggattg attttcatca caggcaaggc gcgcggttcg cgttccaact
      781 gcaatgcggc ctgctcgaaa tggttgcggt acaggtgcgc gtcgccaaac gtatggacaa
      841 actcgcccgc ctccaatccg cacacttgcg ccatcatcat ggtcaacagc gcgtagctgg
      901 caatattaaa cggcacacca aggaaaatat ccgcgctgcg ctggtaaagc tggcaggaca
      961 gtttgccgtc ggcaacgtaa aactgaaaca gcgcgtggca gggcggcaat gccatttcat
     1021 cgaccaaagc cggattccac gccgatacaa tcaggcggcg cgagtcgggg tttttcttaa
     1081 tttgttccac cacattggcg atttggtcga tatgcctgcc gtcgggcgcg ggccagttac
     1141 gccactggta gccgtaaacc gggcctaagt cgccgttttc gtccgcccac tcgtcccaaa
     1201 tggaaacatt gttgtccttt aggtatttga tattggtatc gcctttgaga aaccaaagca
     1261 gctcgtggat aatcgagcgc aaatgcagct ttttggtcgt cagcagcgga aaacctttgc
     1321 ccaagtcaaa acgcatctga taaccgaata cggagcgcgt gcccgtaccg gtgcggtctg
     1381 atttgtccgt accgttgtcg aggacgtggc gcatcaagtc caaataggcc ttcatcatca
     1441 tctttcatca aattaaacgg cgcatattgt aacatttccg gccaacgccc gagtccggac
     1501 aaacgcacac gccgccccgc cggacgataa aaacgcagat acaggcaggc aggattgttg
     1561 gcaatttcag tccttttcca cagtaaaacc cagtgggaaa acaaaattac cttgattgga
     1621 atcaaaaaat ctagtttaat tacttagaat aaaatttcaa taatattttt atttacgaaa
     1681 ttaatttatg attattgatt aattatcggc aacaaacatc aaacatcgaa aacatggaaa
     1741 aaataatgtc aacaattttt gccaaatcgg gcttggcatc agaaaaaaat aggtttatat
     1801 tcccacctac aaatttgttt tcccattagt acactatcaa ccaaaaggag tatccgaatg
     1861 actgacctga acaccctgtt tgccaacctc aaacaacgca atcccaatca ggagccgttc
     1921 catcaggcgg ttgaagaagt cttcatgagt ctcgatccgt ttttggcaaa aaatccgaaa
     1981 tacacccagc aaagcctgct ggaacgcatc gtcgaacccg aacgcgtcgt catgttccgc
     2041 gtaacctggc aggacgataa agggcaagtc caagtcaacc ggggctaccg cgtgcaaatg
     2101 agttccgcca tcggtcctta caaaggcggc ttgcgcttcc atccgaccgt cgatttgggc
     2161 gtattgaaat tcctcgcttt tgaacaagtg ttcaaaaacg ccttgaccac cctgcctatg
     2221 ggcggcggca aaggcggttc cgacttcgac cccaaaggca aatccgatgc cgaagtaatg
     2281 cgcttctgcc aagcctttat gaccgaactc taccgccaca tcggcgcgga caccgatgtt
     2341 ccggccggcg acatcggtgt aggcgggcgc gaaatcggct acctgttcgg acaatacaaa
     2401 aaaatccgca acgagttttc ttccgtcctg accggcaaag gtttggaatg gggcggcagc
     2461 ctcatccgtc ccgaagcgac cggctacggc tgcgtctatt tcgcccaagc gatgctgcaa
     2521 acccgcaacg atagttttga aggcaaacgc gtcctgattt ccggttccgg caacgtggcg
     2581 caatacgccg ccgaaaaagc catccaactg ggcgcgaaag tgctgaccgt ttccgactcc
     2641 aacggcttcg tcctcttccc cgacagcggt atgaccgaag cgcaactcgc cgccttgatc
     2701 gaattgaaag aagtccgccg cgaacgcgtt gccacctacg ccaaagagca aggtctgcaa
     2761 tactttgaaa accaaaaacc gtggggcgtc gccgccgaaa tcgccctgcc ctgcgcgacc
     2821 cagaacgaat tggacgaaga agccgccaaa accctgttgg caaacggctg ctacgtcgtt
     2881 gccgaaggtg cgaatatgcc gtcgactttg ggcgcggtcg agcaatttat caaagccggc
     2941 atcctctacg ccccgggaaa agcctccaat gccggcggcg tagcaacttc aggtttggaa
     3001 atgagccaaa acgccatccg cctgtcttgg actcgtgaag aagtcgacca acgcctgttc
     3061 ggcatcatgc aaagcatcca cgaatcctgt ctgaaatacg gcaaagtcgg cgacacagta
     3121 aactacgtca atggtgcgaa cattgccggt ttcgtcaaag ttgccgatgc catgctggcg
     3181 caaggcttct aagcaaacgc cgccgctccg caaacaaaat gccgtccgaa ccgcaaatgc
     3241 tgttcagacg gcatttcatt atccgcccgt tcgaatcggg tgatactatt tgtatccaga
     3301 attgttggat agtttgggag tggagaggaa gaaatgatta tggaccaata ctatatggag
     3361 ttaaagaata agttatctaa cagaccaatc ctactggata atactaatga ttttcttttt
     3421 gttttagtaa atacagtgaa agctatgata gaaaatactg ataaaagtca gctttcagag
     3481 ttagataaaa ttttagacgg tgtcacaagt caagaattga aacttgccta tgatttttgt
     3541 caagggaaat tcggtcaagc aggtttttct tatcgtaggc acccgaatta tttttatttg
     3601 tccagtttaa ttgcgacttt tccagaattt gagttgtcta aagcagaccg agattacctc
     3661 aaaggaatca taaattttga taactacctt ttatatgagt tagattagtc tttaatcacc
     3721 tcaaaaccct atttattcaa aaggagaaaa aatgattgag ctgaaattag tagatgagag
     3781 cagttttcag gcagtgctgg atttgaaaat atctgaagct gatgaacgag cacgttttgt
     3841 ggctccaaat gtacgctctt tagctgacgc atggctctac cgggaaaatg aagatgtgtt
     3901 tccgagggca atctattggg ataagcaagt ggttggcttt ctcctgctgg aaatagacaa
     3961 ggatgaagca gaatacttta tctggcggat aatgattggt cag
//
LOCUS       DAWITQ010000170         3878 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.170, whole genome shotgun sequence.
ACCESSION   DAWITQ010000170 DAWITQ010000000
VERSION     DAWITQ010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3878)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3878)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3878
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.170"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            37..735
                     /locus_tag="WIX18_001894"
     CDS             37..735
                     /locus_tag="WIX18_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HINT domain-containing protein"
                     /protein_id="HEZ5238953.1"
                     /translation="MVKTADGYKAIAHIQAGDRVLSKDEASGETGYKPVTTRYGNPYQ
                     ETVYIEVSDGIGNSQTLISNRIHPFYSQGKWIQAGRLKKGDTLLSESGAKQTVQNITL
                     KQQPLKAYNLTVADWHTYFVKGDKAETEGVWVHNSCPPYKRPNNATTKAQRESVQGKP
                     CVECGKLAEKMIADHKKPLVVEYYETGTIDKSKMRAIESVQPQCPTCSAKQGGRLSQY
                     SKEQKRKLSNGNKK"
     gene            719..1072
                     /locus_tag="WIX18_001895"
     CDS             719..1072
                     /locus_tag="WIX18_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238954.1"
                     /translation="MGIKNEQIIICKKYNTEIYPVSDVSKIGVAENVKQANLYPINGL
                     RHRPKGDTNGWYIWAGENFSYDKNFFLPLHTFHLQIWRPEIIPFLTLPPGYRFLIGEN
                     GYEDVWFDELLLNDN"
     gene            1062..1385
                     /locus_tag="WIX18_001896"
     CDS             1062..1385
                     /locus_tag="WIX18_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HEZ5238955.1"
                     /translation="MIIDEKSTSDVLKQYQELGFDLTKSMIIEFFIEGSQKNLQSIES
                     QLISYRQDFQISIEQDEFGEMWTCYCSVNIVPSLENILAIETTLFDIAQKNDCNYEGF
                     GSYGN"
     gene            1620..1889
                     /locus_tag="WIX18_001897"
     CDS             1620..1889
                     /locus_tag="WIX18_001897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238956.1"
                     /translation="MSVKELFKVILDKNKDFPIRTIHRTPIGILPKPVALSIVQYEDD
                     QGFYLFYLDETGQEQTDTYHDTLDSAFEQVEFEFGISKEEWMQSP"
     gene            1871..2023
                     /locus_tag="WIX18_001898"
     CDS             1871..2023
                     /locus_tag="WIX18_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238957.1"
                     /translation="MDAKPLGGNIKMPLYFSDGISVNKKVGIGAQNSLRLAGIGMKSL
                     RKNDYS"
     gene            2010..2555
                     /locus_tag="WIX18_001899"
     CDS             2010..2555
                     /locus_tag="WIX18_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004463655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HEZ5238958.1"
                     /translation="MIIVEHLEHYLGEIESGIKCLDRRYHLSVSVFPSQPYKGVTTFS
                     TLGLNRYDLNYKSRFELIFTCSEEWNKENIAAFLSGVAEYLIDNRQPILRGEIIQLPR
                     VIIEGSKMDALYVSAPFYFDDDFQVCYGEHYNIVFPLLVPLYKQEAELVEKKGWNAFE
                     QFLLDNEVGNLSDMNRKPFVW"
     gene            2689..3318
                     /locus_tag="WIX18_001900"
     CDS             2689..3318
                     /locus_tag="WIX18_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HINT domain-containing protein"
                     /protein_id="HEZ5238959.1"
                     /translation="MVKTADGYKAIAHIRVGESVLSKDEASGKTGYKPVTAQYGNPYQ
                     ETVYIEISDGIGNSQTLVSNKIHPFYSQGKWIQAGRLKKGDTLLSESGAKQTVQNITL
                     KQQPLKAYNLTVADWHTYFVKGDKAETEGVWVHNSCPPKRTGSSKNEKHGDGGRSQIS
                     AESKIAELTNKIIPGMSKNERLKIERTIRNITKNANRKAKGEEHGRRGR"
     gene            3299..3754
                     /locus_tag="WIX18_001901"
     CDS             3299..3754
                     /locus_tag="WIX18_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238960.1"
                     /translation="MVDAVVKTPEFLPFTSVGIFRFGADITEYKNILETFMYEPPDEF
                     RTEYYESPDSNLLISVKKNKIISIFCYQELYFMGVNIIGLNFEDFKQLFHHPKSYGVD
                     KYYLSNESYPTYVYEFDEIGVQAWEAKGKIVTIIAGGKDNYSTEPYYDE"
     gene            3761..3817
                     /locus_tag="WIX18_001902"
                     /pseudo
     CDS             3761..3817
                     /locus_tag="WIX18_001902"
                     /inference="COORDINATES: protein motif:HMM:NF026864.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         1322 a          728 c          777 g         1051 t
ORIGIN      
        1 tctaaatcct acacctgctc cttccacggc agcaccttgg tcaaaacggc agacggctac
       61 aaagccattg cccatattca agccggagac cgcgtccttt ccaaggacga ggcaagcgga
      121 gaaacgggat acaaacccgt taccacccga tacggtaatc cgtaccagga aaccgtttac
      181 attgaagttt cagacggcat cggcaacagc caaaccctga tttccaaccg catccatccg
      241 ttttacagtc aaggaaaatg gatacaggca ggtcgtctga aaaaaggcga caccctgctt
      301 tccgaaagcg gcgcaaaaca gacggttcaa aacattaccc tcaaacagca gccgctcaaa
      361 gcctacaacc tgaccgttgc cgactggcat acttacttcg tcaagggaga taaggcggaa
      421 acggaagggg tgtgggttca taattcttgt ccgccatata agagaccaaa taacgcaacg
      481 acaaaagcac aacgagaaag tgtacaagga aaaccctgcg ttgaatgcgg taaattagcc
      541 gaaaaaatga ttgccgacca taaaaaacca ttagttgtcg agtattatga aacagggaca
      601 attgacaaat ctaagatgag agcaattgaa tcagtacaac cgcaatgtcc gacttgttct
      661 gcaaaacaag gagggagatt aagccaatat tcaaaagaac agaaaaggaa actgagtaat
      721 gggaataaaa aatgaacaaa taataatttg taaaaaatat aatacagaaa tatatcctgt
      781 ttccgatgtt tcaaaaatcg gtgttgctga aaatgtcaaa caggcaaacc tgtatccgat
      841 taacgggtta aggcaccgtc ccaaaggtga tactaacggt tggtatatct gggccggtga
      901 aaacttctcc tatgataaaa attttttcct gcccttgcat actttccatt tgcaaatatg
      961 gcgacccgaa atcatcccct ttttgacact tccgcccggt taccgttttt taattgggga
     1021 aaacggttat gaagacgtat ggtttgatga gttgctatta aatgataatt gacgaaaaat
     1081 ctacttcaga tgtactgaaa caatatcaag aactagggtt tgatttgaca aaatcgatga
     1141 taatagagtt ttttatagag ggttctcaaa aaaatctgca atcaatagaa agccaactca
     1201 tttcttatcg gcaagatttt caaatcagta ttgaacaaga tgaattcgga gaaatgtgga
     1261 cttgctattg ttccgtcaat atcgtccctt cccttgaaaa cattttagct attgaaacta
     1321 cgttatttga tattgcacaa aaaaatgatt gtaattatga aggttttggt tcgtatggga
     1381 actaacaaga agtgtaggtt gggttgaaaa acacaacaat caaaaggtcg tctgaaacca
     1441 tgtttaattt tcagatggct tttccttcat ttaaaacagg atattgagat ctaagttctt
     1501 taaaaatcct acacctgctc cttccacggc agcaccttgg tcaaaacggc agacggctac
     1561 aaagccaatg gacgtgtaat agaaaatagt gcagtaacaa ttattcggat taaaaaatta
     1621 tgagtgtaaa agaattattc aaagttatct tagataaaaa taaagatttt cctattagaa
     1681 cgattcatcg cacgccaata gggatacttc ccaaacctgt tgctttaagt attgttcaat
     1741 atgaagatga ccaaggattt tatttgtttt atttggatga gaccggtcag gaacaaacgg
     1801 atacttatca tgacacatta gattcggcat ttgaacaggt ggagtttgaa tttggaatta
     1861 gcaaagaaga atggatgcaa agcccttagg tggcaatatc aagatgccgc tttatttttc
     1921 agacggcatt tccgtcaata aaaaagtcgg tattggagcc caaaacagcc tacgtcttgc
     1981 cgggataggg atgaaatctt taagaaaaaa tgattatagt tgaacattta gaacattatt
     2041 tgggtgaaat cgaaagcggt ataaaatgct tggatcgacg ttatcatctc agcgtttccg
     2101 tcttcccatc acaaccatat aaaggggtaa ctactttttc tactttaggc ttgaatcgat
     2161 atgacttgaa ctataagagt aggtttgaat taatttttac ctgttctgaa gaatggaata
     2221 aagaaaatat tgcagctttt ctatcaggag tagccgaata tttgattgac aatagacaac
     2281 ctattttaag aggtgaaatt attcaattac ctagggtaat tatcgaaggt agcaaaatgg
     2341 acgcactgta tgtttccgcc ccattttatt tcgacgatga ttttcaggtc tgttatggcg
     2401 aacactacaa tatcgttttc cctttgcttg tcccgttgta taaacaggaa gcagaattgg
     2461 tggaaaagaa aggttggaat gcttttgagc agttcttgct ggataatgaa gttggcaacc
     2521 tttcggatat gaatcggaaa ccgtttgttt ggtaagggct ttcttaaatt tgattaaagg
     2581 tcgtctgaaa ccgtgtttaa ctttcagaca acctttcctt catttgaaac aggatattga
     2641 aaactaagtt tttcaacatt ctacacctgc tccttccacg gcagcacctt ggtcaaaacg
     2701 gcagacggct acaaagctat tgcccatatc cgagtcggcg agagcgttct ttccaaggac
     2761 gaggcaagcg ggaaaacagg atacaaaccc gttaccgccc aatacggtaa tccgtatcaa
     2821 gaaaccgttt acattgaaat ttcagacggc atcggtaaca gccaaaccct tgtttccaat
     2881 aaaatccacc cgttttacag tcaaggaaaa tggatacagg caggtcgtct gaaaaaaggc
     2941 gacaccctgc tttccgaaag cggtgcaaaa cagacagttc aaaacattac cctcaaacag
     3001 cagccgctca aagcctacaa tctgaccgtt gccgactggc atacttactt tgtcaaaggc
     3061 gataaggcgg aaacggaagg agtttgggtt cataattctt gtccgcctaa aagaacagga
     3121 agctccaaga atgaaaaaca tggagatggc ggtcgaagtc aaatatcagc ggaatcaaaa
     3181 attgctgaat taacaaataa aattattccc ggaatgtcca aaaatgaacg cttaaagatt
     3241 gagcgaacaa tcagaaatat tacaaaaaat gccaatcgaa aagcaaaagg agaagagcat
     3301 ggtcgacgcg gtcgttaaaa ctcccgaatt tttacctttt acttctgtag gaatattccg
     3361 ttttggtgcg gatataacag agtacaaaaa catactggaa acttttatgt atgaacctcc
     3421 tgatgagttt agaacagaat attatgaatc tcccgactca aatttactca tttccgtcaa
     3481 aaaaaacaaa attatttcga tattttgtta tcaggagcta tattttatgg gcgttaatat
     3541 aataggtctg aattttgaag attttaaaca gcttttccat caccctaaat catacggtgt
     3601 tgataaatat tatttatcaa atgaatctta tccgacatat gtctatgagt ttgatgaaat
     3661 aggagtacaa gcatgggaag caaaagggaa aattgttact atcattgccg ggggcaaaga
     3721 caattattca acagaacctt actacgatga ataacattac agaaaagaaa caagaaacgg
     3781 tacatttgat aaaaacctaa atcgtattgg agattaatta ttatgtgtat tatgtgtgag
     3841 ttaaaaaact tcagaagaaa tattacttgt tttgaggg
//
LOCUS       DAWITQ010000171         3857 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.171, whole genome shotgun sequence.
ACCESSION   DAWITQ010000171 DAWITQ010000000
VERSION     DAWITQ010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3857)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3857)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3857
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.171"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..274
                     /locus_tag="WIX18_001903"
     CDS             <1..274
                     /locus_tag="WIX18_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PspA"
                     /protein_id="HEZ5238961.1"
                     /translation="NETTKGACKGFCYSHSSYFAEVPEQYQRDASGEYVIRDGKKVET
                     EAWKDYKSIWGEPTEKDENGKYINKYIPKLINPNKPNGEKYEDKPF"
     gene            255..563
                     /locus_tag="WIX18_001904"
     CDS             255..563
                     /locus_tag="WIX18_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238962.1"
                     /translation="MKINHFNIALLFVSTMMLTGCFGHCADFNCTRLDPRWVKAVDTC
                     ETKNLTIVLQVLGEDLGYKSLIEVQDSKIGQHISSQCIYHSGKYDIHKDKQYEHLFAK
                     "
     gene            911..2836
                     /locus_tag="WIX18_001905"
     CDS             911..2836
                     /locus_tag="WIX18_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin"
                     /protein_id="HEZ5238963.1"
                     /translation="MTVGYGFSAGGDYSQSKIRADHASVTEQSGIYAGEDGYQINVQN
                     HTDLKGGLITSTQKSEDDGKNTFSTGTLTFEDLANHAEYKGEAIGLGVSGSVAGDNPN
                     QNSRIYTVNQSGMSSTMGYGKDSDKQYATTHSGINTANITIRDNEKQQQITGISAEEA
                     KRAVKADVTTDNYAEHSGSLKNNFDKDKVQSEIDLQVKVTQEFDSNRKALRAEINKAA
                     DEKRQKAEDIRRENYIDGKNGYNTAESLALDKSADKLEKVAFYTDLALGGLYGIGDST
                     ALTYVTGSAVANPAIRAGTRPRQFWFEKCDGDSLYCSNRNYDDTADRKIYDKNGQEID
                     TKDPNYTGMVEIGDKRQISDLNEIEPNKVTGSIVTTNDGILNPRNDALKNGIKQQKWE
                     VDKEGILLIYNPPTGNSISELLYAAYDKTNDLLGGRLPLASAQKANLELNQYAESKGY
                     KIDSNNHSRGGLTRSVSDKYSVRHNLPLPYNNVQFFGSAANVDDYTNYMNEYGRKDFN
                     ISATTHYTDFVGRTPLVALRSKHIVGGNEPTGGVEDKWFLYSHSSYFAEKPTPYLVNE
                     HGFYMDKNGDLIKDNSGNPIKMTEENKLEYSTKVPNPYLDDFEQKWIKGQTHNKVSGD
                     NPSLPVPVRTKKQQGER"
     gene            2836..3267
                     /locus_tag="WIX18_001906"
     CDS             2836..3267
                     /locus_tag="WIX18_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238964.1"
                     /translation="MKKYFFSVCLLLTGCGVLFDDPLTRFWNGGYFLFPDKEIASDGI
                     YKTSDTDLHYYESLSLEQRKRYLKFKPIKDKCEHKYSDRTKYDYATQMANIVRCFNEQ
                     GYQSETAFILNGHTITQKGSICTKDEPKQCDNVMRSYIVLF"
     gene            3309..3560
                     /locus_tag="WIX18_001907"
     CDS             3309..3560
                     /locus_tag="WIX18_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238965.1"
                     /translation="MKPIYFIIFSFLLTACVVNNDDYFAEPPTPYLINEHGFYMNKKG
                     DLIRDSHGNAIKMTEENKHNFPKESANPYYEKWIKQKRK"
BASE COUNT         1416 a          659 c          782 g         1000 t
ORIGIN      
        1 taatgagaca acaaaaggag cttgtaaggg attttgctat tcgcatagca gttattttgc
       61 ggaagtgcct gaacagtacc aaagggatgc gagcggagag tatgttatta gagatggtaa
      121 aaaagttgag acagaagctt ggaaagatta taagtcaata tggggcgaac cgaccgaaaa
      181 agatgaaaat ggtaaataca tcaacaaata tattcctaaa ttaatcaacc caaataaacc
      241 aaatggagaa aaatatgaag ataaaccatt ttaatatagc attacttttt gtttccacca
      301 tgatgctaac aggatgtttt ggtcattgtg cggattttaa ttgcacgaga ctcgatccac
      361 gctgggtaaa agcagttgat acatgtgaaa ctaaaaatct cacaatagtg ttacaagtat
      421 taggggaaga tttaggatac aaatctctca ttgaggtaca agacagtaaa attggtcaac
      481 acatttcttc tcaatgtatt taccatagcg gtaagtatga tattcataaa gataagcagt
      541 atgagcattt gtttgcaaaa tgatattacg ccaatgtttt acagaaaaac ggctatacct
      601 atacgggtgc ggacggcaaa acttataatt cgattgtgca taataaggat tttgtggaga
      661 acaaagggat acctttcttg ctagaaacca atgacaccac acaaggtata tgtaagggat
      721 tttgctatcc gcatagcaat tattttacgg aagtgcctga acagcaccaa aaggataaga
      781 atgggaatat tgttaaaaag aatggtgaac ctgcatcaaa ggcgtacaag tcaatgccaa
      841 aaacctaagt attcaaagcg tacaagatag agaaacttat caaagcaaac aacaaaacgc
      901 cagtgcacaa gtgaccgtag gctacggctt cagtgccggt ggcgattaca gccaaagcaa
      961 aatccgagcc gaccatgctt cggtaaccga gcaaagcggt atttatgccg gagaagacgg
     1021 ttatcaaatc aatgtgcaga accacaccga tttgaaaggc ggtttgatta cttccaccca
     1081 aaaatcggaa gacgatggca aaaacacatt ctcaacgggt acgctcacct ttgaagacct
     1141 agcgaatcac gccgaatata agggtgaagc gattggtttg ggtgtttcag gcagcgttgc
     1201 gggcgataat ccaaatcaaa acagccgtat ttataccgtt aatcaaagcg gtatgagtag
     1261 cacaatgggc tatggcaaag acagcgacaa acaatacgcc acaacccatt caggcattaa
     1321 cactgccaat atcaccattc gtgataacga aaaacaacag caaatcacag gaatatcggc
     1381 ggaagaagcg aaacgggctg ttaaagccga tgtaacaacc gacaactacg ccgaacattc
     1441 aggcagcctg aaaaacaatt tcgataaaga caaagtgcaa tcagagattg atttgcaggt
     1501 taaggttaca caggagtttg atagtaatcg caaagccttg cgtgcagaaa tcaacaaagc
     1561 agcagatgaa aaaagacaaa aagccgaaga tataagaaga gaaaattata ttgacggcaa
     1621 aaacggttat aacaccgcag aatctttggc tttggataag tctgccgaca aattggaaaa
     1681 agtcgctttt tacactgatt tggcattagg tggattgtat ggaattggcg atagcacggc
     1741 tttaacttat gtaacaggta gtgcagtggc taatccagcc attcgagcgg gtacaagacc
     1801 aagacagttt tggtttgaga aatgtgacgg cgatagtttg tattgttcta atagaaatta
     1861 tgacgatacg gcggatagaa aaatttatga taaaaacggg caagaaattg acactaaaga
     1921 tccaaattac actggaatgg ttgagattgg tgataaacgg caaatctctg atttaaatga
     1981 gattgaacct aacaaagtaa ctggaagcat cgttactaca aatgacggta tattgaaccc
     2041 acgaaatgac gctctcaaaa atgggattaa gcaacaaaaa tgggaagtag ataaggaagg
     2101 tattttgctt atctacaatc cgccaacagg caattctatt tctgaacttt tgtatgccgc
     2161 ttatgataaa actaacgatt tgttaggcgg tcgtttgcct ttagcttctg cacaaaaagc
     2221 gaaccttgaa ttaaatcaat atgcagaaag taaaggttat aagattgata gtaacaatca
     2281 tagtcgtggc ggtttaactc gaagtgtttc tgataaatat tcagtcagac ataatctgcc
     2341 tttaccgtat aacaatgttc aattcttcgg tagtgcggca aatgtagatg attacacaaa
     2401 ctacatgaac gaatatggta ggaaagattt taatatttct gccacaacac attacacaga
     2461 ttttgttggt agaactccat tagttgcatt gcgtagtaag catattgttg gtggaaatga
     2521 accaacaggc ggagttgaag ataaatggtt cttatattcg cacagcagtt attttgcaga
     2581 aaaaccaacc ccataccttg taaatgaaca cggtttttat atggataaaa atggcgacct
     2641 gataaaagat aattcaggaa atcctataaa aatgacggaa gaaaataaat tggaatattc
     2701 aacaaaagtt ccaaatccat atttagatga ttttgaacag aaatggataa aaggacaaac
     2761 tcataacaag gtgtcaggtg ataatccgtc tcttccagtt ccagttagaa caaaaaaaca
     2821 acagggagag cgataatgaa aaaatacttc ttttcagtct gcttgttatt aacaggctgt
     2881 ggggttttgt ttgatgaccc actaacaaga ttttggaatg gcggttattt tttgtttcca
     2941 gacaaagaaa tagcaagtga tggaatttat aaaacttcgg atactgactt gcattattac
     3001 gaaagtttgt cgcttgaaca aagaaaacgc tatctaaaat ttaagcctat taaggataaa
     3061 tgcgaacata agtattcaga tagaacaaaa tatgattacg ctacacaaat ggcaaatatc
     3121 gttaggtgtt ttaatgaaca aggctatcaa tctgaaactg cttttatatt gaatggacat
     3181 acaataactc aaaaaggtag tatttgcaca aaagatgaac ccaaacaatg cgataatgtt
     3241 atgcgtagtt atatcgtttt attttaattg aaatgcaact tgaaaattga caatacagga
     3301 gcaacaaaat gaaaccgatt tattttatta ttttttcttt tttattaact gcttgcgtgg
     3361 ttaataatga tgattatttt gctgaaccgc ctacaccata cttaattaac gaacacggtt
     3421 tttatatgaa taaaaaaggt gatttaatta gagatagtca cggtaacgca attaaaatga
     3481 cagaagaaaa taaacacaat ttccccaaag aatccgctaa tccttattac gaaaaatgga
     3541 taaaacaaaa acgaaaataa ataacaaagc aaacatagtg taggcaactt gttgcccacg
     3601 cgttaatgat aactttcagg cagcctgaaa gcctaaaacc acaaggaaag ctccaaaaat
     3661 gaacaaccgc ttacacaaag tcatcttcaa ccgcaacaca gcaagcgtag ggtgggcaac
     3721 ttgttgccca cgcagttcaa tcagatacac ataaaatgat gttttaatgt gaaatatttg
     3781 atttcaggct gtctgaaaaa taaaatgatg tggtgtgcat caaaccgcgt gggcaacaag
     3841 ttgcccaccc tacgctt
//
LOCUS       DAWITQ010000172         3848 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.172, whole genome shotgun sequence.
ACCESSION   DAWITQ010000172 DAWITQ010000000
VERSION     DAWITQ010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3848)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3848)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3848
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.172"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..2076
                     /locus_tag="WIX18_001908"
     CDS             <1..2076
                     /locus_tag="WIX18_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HEZ5238966.1"
                     /translation="GKANAFTAPITVVNYDEQALNNTEARTLVDAVAKKDASVWQFGG
                     ESNTLTGLYFRGYQLDARQFSVNGLAGMYGTQGTASVQVGSAQLIKGASTAVNGMNPE
                     GAVSGSVNIETKKAADEGNRKIGLGRFSNNRAQGTFDLGQRFGENKAFGVRANGKLRH
                     GDTPRHGYSEDNKEFAVNADYRGETLRVAFDSIYAKRKTNGGRARMQDIQNAGGRLFG
                     APDGKTNLLPSWNWQNTAGQTNMLTFEWDAFDNAQITGGIGYNKARYYGTLISPTVCL
                     NATSTCTDMQNTNASGKVTARNYDYNTGTARLTDQYFRTLSMNLSARGEFETGPVTHN
                     WSTAFDRVIRQRKTINGSGNGNSKIEVKANENIANQLASFTADYPNSWENSANLDANI
                     KVNSLALSDTLGFVDNKYRLTLGERFQTVEYTDKKSQSGDAKRFSPMLMAAWVPQPDL
                     VVYGNYMEDLEPADIKTDDSGETTMAKPRVSRQFEVGVRKNWGDFVTTLNAFQIKRPG
                     YWRGNTKKGTDFAAYKAAGGADGDEQGMERSRGIEFNAYANLLNKTLRPTFGLMYLQS
                     TVKDYPNSRDMLVNGVQVANPRVIAKAGLEWDTPFAKGLTLNSNVSYFGKSYQDTQKQ
                     YAFPSYTLVDVGARYKTKLGKNTLTVSSSVENLFNKNYWQVQRGQYDRSFAVVGLPRT
                     YWLKAELDF"
     gene            2200..3750
                     /locus_tag="WIX18_001909"
     CDS             2200..3750
                     /locus_tag="WIX18_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HEZ5238967.1"
                     /translation="MKKPLISVAAALLGVALGTPYYLGVKAEESLTQQQKILQETGFL
                     TVESHQYERGWFTSMETTVIRLKPELLNNAQKYLPDNLKTVLEQPVTLVNHITHGPFA
                     GGFGTQAHIETEFKYAPETEKVLERFFGKQAPVSLANTVYFNGSGKMEVSVPAFDYEE
                     LSGIRLHWEGLTGKTVYQKGFKSYRNSYDAPLFKIKLADKGDAAFEKAHFDSETSDGI
                     NPLALGSSNLTLEKFSLEWKEGVDYNVKLNELVNLVTDLQIGAFINPNGSIAPSKIEV
                     GKLAFSTKTGESGSFINSEGQFRFDTLVYGNEKYGPLDIHIAAEHLDASALTVLKRKF
                     AQISAKKMTEEQIRNDLIAAVKGEASGLFTNNPVLDIKTFRFTQPSGKIDVGGKIMFK
                     DMKKEDLNQLGLMLKKTEADIRMSIPQKMLEDLAVSQAGNIFSVNAEDEAEGRASLDD
                     INETLRLMVDSTVQSMAREKYLTLNGDQIDTAISLKNNQLKLNGKTLQNEPEPDFDEG
                     GMVSEPQQ"
BASE COUNT         1087 a          951 c          969 g          841 t
ORIGIN      
        1 ggcaaagcca acgcctttac cgcgccgatt accgtcgtca actacgacga acaagccctc
       61 aacaacaccg aagcgcgtac tttggtggat gccgtagcga aaaaagacgc ttccgtttgg
      121 cagttcggcg gagaaagcaa cacgctgact ggactgtatt tcagaggtta tcagcttgat
      181 gcgcgccaat tcagcgtcaa cggtttggca ggtatgtacg gcacgcaagg cacggccagc
      241 gtgcaagtcg gctccgcaca actgattaaa ggcgcgtcca ccgccgtaaa cggcatgaac
      301 cctgaaggtg cggtatccgg ttccgtcaat atcgaaacca aaaaagccgc cgatgaaggc
      361 aaccgcaaaa tcggtttggg ccggtttagc aacaaccgcg cccaaggtac gttcgatttg
      421 ggtcaacgct tcggcgaaaa caaagcattc ggcgtacgcg ccaacggcaa actgcgccac
      481 ggcgacactc cgcgccacgg ttacagcgaa gacaacaaag aatttgcggt aaatgccgac
      541 tatcgcggcg aaacactgcg cgtagcgttc gattccatct acgcaaaacg caaaaccaac
      601 ggcggtcgcg cgcgtatgca ggacattcaa aacgccggcg gacgcttgtt tggcgcgccc
      661 gatggtaaaa ccaacctgct gccttcttgg aactggcaaa ataccgccgg ccaaaccaat
      721 atgcttacgt ttgaatggga tgcgtttgat aatgcacaga ttacaggcgg tatcggctac
      781 aacaaggcac gctattacgg cacgctgatt tccccgaccg tatgtttgaa tgctaccagc
      841 acttgtaccg atatgcaaaa cacaaacgcc agcggcaaag taacggcacg caactatgac
      901 tacaataccg gtactgcgcg cctgaccgac caatacttcc gcactttaag catgaacctg
      961 tctgcgcgag gcgaatttga aaccggcccg gtaacacata actggagtac ggctttcgac
     1021 cgcgttatcc gccagcggaa aaccataaac ggcagcggga acggcaacag caagatagaa
     1081 gtgaaggcaa acgaaaatat tgcgaatcaa ttggcatcgt ttacagccga ctatcccaat
     1141 tcttgggaga actctgccaa cttggatgcc aatatcaaag tcaacagcct ggctttgtcc
     1201 gacaccttgg gcttcgtgga taacaaatac cgcctgactt tgggcgaacg tttccaaaca
     1261 gtcgaatata ccgacaaaaa atcacagagc ggcgatgcca aacgtttcag cccgatgctg
     1321 atggcggcgt gggtgccgca acctgatttg gttgtgtacg gcaactatat ggaagacttg
     1381 gagcctgccg acattaaaac cgatgattcc ggtgaaacga caatggcgaa accgcgcgtc
     1441 agccgccagt ttgaagtggg cgttcgtaaa aactggggcg actttgttac gacgttgaac
     1501 gcgtttcaaa tcaaacgccc gggctactgg cgcggcaata ccaaaaaagg tactgatttt
     1561 gcagcatata aagcagcagg aggcgcagac ggagatgaac aaggcatgga acgcagccgc
     1621 ggtatcgaat tcaatgccta tgccaacctg ttaaacaaaa ccctgcgccc gactttcggc
     1681 ctgatgtacc tgcaatcgac cgtgaaagac tacccaaatt cacgcgatat gctggttaac
     1741 ggcgtacaag tcgccaatcc gcgcgtaatt gccaaggcag gtttggaatg ggatacaccg
     1801 tttgccaaag gcttgacttt aaacagcaat gtttcgtatt tcggcaagtc ttaccaagac
     1861 acgcaaaaac aatacgcctt cccatcctat accttggttg atgtaggcgc gcgctacaaa
     1921 accaagctcg gcaaaaatac gttgaccgtc agcagctcgg tggaaaatct gttcaacaaa
     1981 aactactggc aggtacagcg cggccaatac gaccgcagct tcgccgtcgt cggtctgccg
     2041 cgtacttact ggctgaaggc ggaattggat ttctgatttc tccgcatctg gaaaatgccg
     2101 tccgaacagg tttcagacgg catttctttt aaagagatat ggcgggatac gcttaaataa
     2161 tgctattcta gcgtctttga aacctgcttg tttgaagtga tgaaaaaacc tttgatttcg
     2221 gttgcggcag cattgctcgg cgttgctttg ggcacgcctt attatttggg tgtcaaagcc
     2281 gaagaaagct tgacgcagca gcaaaaaata ttgcaggaaa cgggcttctt gaccgtcgaa
     2341 tcgcaccaat atgagcgcgg ctggtttacc tctatggaaa cgacggtcat ccgtctgaaa
     2401 cccgagttgc tgaataatgc ccaaaaatac ctgccggata acctgaaaac agtgttggaa
     2461 cagccggtta cgctggttaa ccatatcacg cacggccctt ttgccggcgg atttggcacg
     2521 caggcgcaca ttgaaaccga gttcaaatac gcgcctgaaa cggaaaaagt tttggaacgc
     2581 ttttttggga aacaagctcc ggtttccctt gccaataccg tttattttaa cggcagcggt
     2641 aaaatggaag tcagtgttcc cgccttcgat tatgaagagc tgtcgggcat caggctgcat
     2701 tgggaaggat tgacgggaaa aacggtttat caaaaaggtt tcaaaagcta ccgcaacagc
     2761 tatgatgcgc ccttgttcaa aatcaagctg gcagacaaag gcgatgccgc gtttgaaaaa
     2821 gcgcatttcg attcggaaac ttcagacggc atcaatccgc ttgctttggg cagcagcaat
     2881 ctgaccttgg aaaaattctc cctagaatgg aaagagggtg tcgattacaa cgtcaagtta
     2941 aacgaactgg tcaatcttgt taccgatttg cagattggcg cgtttatcaa tcccaacggc
     3001 agcatcgcac cttccaaaat cgaagtcggc aaactggctt tttcaaccaa gaccggggaa
     3061 tcaggctcat ttatcaacag tgaagggcag ttccgttttg acacgctggt gtacggcaat
     3121 gaaaaatacg gcccgctgga catccatatc gccgccgaac atctcgatgc ttctgcctta
     3181 accgtattga aacgtaagtt tgcacaaatt tccgccaaaa aaatgaccga ggaacaaatc
     3241 cgcaatgatt tgattgccgc cgtcaaaggc gaggcttccg gactgttcac caacaatccc
     3301 gtattggaca ttaaaacttt tcgtttcaca cagccgtcgg gaaaaatcga tgtgggtgga
     3361 aaaatcatgt ttaaagacat gaagaaggaa gatttgaacc aattgggttt gatgctgaag
     3421 aaaaccgaag ccgacatcag aatgagtatt ccccaaaaaa tgctggaaga cttggcggtc
     3481 agtcaggcag gcaatatttt cagcgtcaat gccgaagatg aggcggaagg cagggcaagt
     3541 cttgacgaca tcaacgagac cttgcgcctg atggtggaca gtacggttca gagtatggca
     3601 agggaaaaat atctgacttt gaacggcgac cagattgata ctgccatttc tctgaaaaac
     3661 aatcagttga aattgaacgg taaaacgttg caaaacgaac cggagccgga ttttgatgaa
     3721 ggcggtatgg tttcagagcc gcagcagtaa tgggtcaaat gccgtctgaa atgttcaggc
     3781 ggcattttgt tgtattggaa actgccgttt tcaaccattc ctttagataa gccgtgtcgg
     3841 attcgttt
//
LOCUS       DAWITQ010000173         3837 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.173, whole genome shotgun sequence.
ACCESSION   DAWITQ010000173 DAWITQ010000000
VERSION     DAWITQ010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3837)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3837)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3837
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.173"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..287)
                     /locus_tag="WIX18_001910"
     CDS             complement(<1..287)
                     /locus_tag="WIX18_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238968.1"
                     /translation="MKKDIFYCEQWSYGYKKLHKPFSEKQAEEKHLKGELYTAVIGSA
                     TQPEYVITLREEVGFFSVHFFDKFGRDYLTHQFQKYSNSNYYFLSMAVWRD"
     gene            complement(284..469)
                     /locus_tag="WIX18_001911"
     CDS             complement(284..469)
                     /locus_tag="WIX18_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238969.1"
                     /translation="MRTHFVISNVPSTPTTIRGRELEGKLILEVPAQVNPIPQSVLRA
                     AQEENVIIRDTTGRIYK"
     gene            complement(886..1821)
                     /locus_tag="WIX18_001912"
     CDS             complement(886..1821)
                     /locus_tag="WIX18_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 49 family protein"
                     /protein_id="HEZ5238970.1"
                     /translation="MGHNMMTTQKWYEHITNVIIGNTANFNSGCPEAIDYVDERKGVP
                     LAAMRHILMYTEAAASHAYLFEHDLNKFKQYAYVAGKLGILRSVNSTDPEPFFFPCDM
                     LNIQDPMFLMLMSDSPQLREFLVRNIDNIANDTEAFVNRYDLNRHMIYNTLLMVEGKQ
                     LDRLKQRSEKVLAHPTPSKWLQKRLYDYRFFLAFAEQDAEAMKAALEPLFDKKTARMA
                     AKETLSYFDFYLQPQIVTYAKIASMHGFDLGIDHEIAPRDLTVYDPLPADEYQDIFDF
                     MKQYDLSYPYEYLQDWIDYYTFKTDKLVFGNAKRE"
     gene            complement(1824..1997)
                     /locus_tag="WIX18_001913"
     CDS             complement(1824..1997)
                     /locus_tag="WIX18_001913"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238971.1"
                     /translation="MIKQVANNLPDGSPAKAAVFKAEREGKLKTAIAGVDRQTGKAVI
                     LSVKVPSKTNIRR"
     gene            1996..2264
                     /locus_tag="WIX18_001914"
                     /pseudo
     CDS             1996..2264
                     /locus_tag="WIX18_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244123.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS30 family transposase"
     gene            complement(2332..2775)
                     /locus_tag="WIX18_001915"
     CDS             complement(2332..2775)
                     /locus_tag="WIX18_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238972.1"
                     /translation="MQAMNKNYLFYLIQNIKSIFLIGGVFFGLLIFSGLWGNDFKLSF
                     LGVIDFIFGMVGGGFIVMLWFLIPVILSTLFRWVFQNQLAVSVILTFIVFYTYGYFSL
                     FNSSERVGSFWYLVIPTIMFIGLSEWFIYKSSVHSLGENVTPRSN"
     gene            complement(2763..3458)
                     /locus_tag="WIX18_001916"
                     /pseudo
     CDS             complement(2763..3458)
                     /locus_tag="WIX18_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238820.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin"
     gene            complement(3466..>3837)
                     /locus_tag="WIX18_001917"
     CDS             complement(3466..>3837)
                     /locus_tag="WIX18_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
                     /protein_id="HEZ5238973.1"
                     /translation="AAANKGKCQDGAIGAAVGEILGEALLDGRDPGSLNVKDRAKIIA
                     KAKLAAGTVAALSKGDVNAAANAAAVAVESNALSKERMDKLTKCLSGKTCSTTMEKVN
                     AIKKDEQFSKVIDTEIQKSLF"
BASE COUNT         1130 a          858 c          703 g         1146 t
ORIGIN      
        1 taatctctcc atacagccat agaaagaaaa taataattcg aattggaata tttttgaaat
       61 tgatgggtta aataatccct tccaaattta tcgaaaaaat gtaccgaaaa aaaacctact
      121 tcctctcgca aggtaattac atattcaggt tgtgtcgccg aacctattac ggcagtatat
      181 aactcccctt taagatgttt ttcctcagct tgtttctcag aaaaaggctt atgaagtttc
      241 ttataaccat aagaccactg ctcacaataa aaaatatctt tcttcatttg taaatccttc
      301 ctgttgtatc tctaatgata acattttctt cttgtgccgc ccttaataca gattgtggaa
      361 ttggattgac ctgagcagga acttctaaaa taagttttcc ttcaagctct cttcctctta
      421 tcgtagtagg tgtacttgga acattggaaa tgacaaagtg agtacgcaaa ccatctgaag
      481 gcggtgtgtt tgaacctgtt gaaagccgcc aacaggctaa gtgcgcccgc gccgcctaaa
      541 aggcagcccg gatgcctgat tatcgggtat ccgggaagga ttaaggggat atttgggtaa
      601 aattaggagg tatttggtac gaaaacagcc gaaatcctgt gtttgggttt cggatgtcgg
      661 ggaagggctt ttttgcaaag gtctcaactc atgttattgc aaagatctca tgccttgttt
      721 tgccagcagg ttgagttctt ctccggcaat cagcgtggta aagccccgcc acaacacaga
      781 tctatgtact gtggaagggc ttcaatttat agctttcgaa aatctttcag ctttaagacg
      841 gcctaaagtt gtaatctata aaacaggagc tcagagtttt acggctcact ctcgcttcgc
      901 gttaccaaat accagcttat cggttttgaa cgtatagtaa tctatccaat cctgcagata
      961 ttcatacgga taagacaagt catactgttt cataaaatcg aagatgtctt gatattcgtc
     1021 tgccggcagc ggatcgtaaa cagtcaaatc cctcggcgcg atttcgtggt ctatgcccaa
     1081 atcgaaaccg tgcatggatg cgattttggc gtaggtaacg atttgcggct gcaggtagaa
     1141 atcgaaatag gacaatgttt ctttggcagc catacgcgcg gtttttttat caaaaagcgg
     1201 ctctaaggcg gccttcatcg cctcggcatc ctgttcggcg aaagcgagga agaagcggta
     1261 atcgtacaac cgcttttgca gccatttgct aggggtggga tgcgccaaga ctttctcgct
     1321 acgttgtttc aaccgatcaa gctgcttacc ctccaccatc agcagagtat tgtaaatcat
     1381 atgacggttg aggtcgtagc ggtttacgaa ggcttctgta tcgttggcga tgttgtcgat
     1441 attgcgcacc agaaactcac gcagctgcgg gctgtcgctc atcagcatca gaaacatcgg
     1501 atcttgaatg ttgagcatgt cacagggaaa gaagaagggt tcagggtctg tagaatttac
     1561 actccgcaaa atacccagct ttcctgcaac ataagcatat tgcttgaatt tattaagatc
     1621 atgttcaaat agataggcat gggaagccgc agcttcagtg tacattaaaa tatgtctcat
     1681 tgctgcaagt ggaacgcctt ttctttcatc tacataatct atagcttcag ggcaaccgct
     1741 attgaaatta gcagtattgc ctatgattac attagtaata tgctcatacc atttttgggt
     1801 ggtcatcata ttgtgcccca ttgttatctc cttatattgg ttttagaagg aactttgaca
     1861 gaaagaataa cggccttacc tgtttgacga tcaacgcctg ctattgccgt ttttaatttg
     1921 ccttcccgct ccgctttgaa gacagcagct ttagcaggac taccatcagg taagttattt
     1981 gcaacttgtt taatcaaaga attctaccga cacatccaaa tggccaaaac attgaaggcg
     2041 gaaacctatt tttaccgccc ttaccattct tgggagaaag ggctgaatga aaacaccaat
     2101 ggactcatcc gacaatattc cccaaacaaa ccgttttccg aaacatcagc gatcgggaga
     2161 tacgtagggt tcaagatgag ttgaaccacc gaccgagaaa aacacttggc tacgaaacgc
     2221 caagtgtttt attcttgaat ttgttccaac catcgatacc ctagtgttgt acttgaaatc
     2281 cgaatctaag gtcatctgaa attaaattta gttttcagac aatctttttc ttcaattgga
     2341 acgtggagtt acattttcac ctaaactatg cacgctagat ttatagataa accattcaga
     2401 cagtccaata aacattatgg ttgggattac caaataccaa aaactaccga ctctttcaga
     2461 tgaattaaat aaagaaaagt acccatatgt ataaaaaaca atgaaggtta atatgacaga
     2521 tacagcaagt tgattttgaa atacccatct gaataaagtt gataatatca ctggaattag
     2581 aaaccataac ataactataa acccaccccc taccatccca aatataaaat ctattacccc
     2641 taaaaaagat agtttaaaat cattacccca taaacctgaa aaaattaaaa ggccaaaaaa
     2701 tactccacct attaagaaaa tagatttaat attttgaata agataaaata aataattttt
     2761 attcatggct tgcatccctg tttctcagaa tatcccataa gcttacaacc atatttaatt
     2821 ctagatttgt aatctaacat attaattcca tcctctattt tttcctctca tctaaaggat
     2881 ttggaattat tgaaaatatc ttatttgatg ttaccccttt aatcaatgac aaataatcct
     2941 tctcattact caaatatttt tggttgaata ggctgtaata acttttgctc gcttttcaac
     3001 tgttgaatat cccactccct aggattagtt tttttattga acaagtctct aaaattataa
     3061 aatccattta ctatcagtgc attgcctgac gcagccctcc attcataaat tggaggatta
     3121 ccaacaactt tacctgccgc aaaagttata taagaagctt ctccgtctgc ccctaaccca
     3181 gttatagcag cacgcgatac aaaatcagct ccaccaaacc atcgtgcttt tgaacccaaa
     3241 ttttgctcat aaagattgct ggcagcaaag aaatctgcac gattgtcaat ggtgttgaaa
     3301 tacttgtcaa atcttgtaga tgccccttgt gagttatata aatagccaaa aacttctttg
     3361 gcaacccgtg atacatccgt aggcatatac ttccacgcag caggcatggc aatatattta
     3421 atagacatat taatgccgtt tctgcaacca tcgcccaatg ggttcctaga acagactttt
     3481 ttgaatttcc gtatcaatta ctttgctaaa ttgttcatcc tttttgatgg catttacttt
     3541 ttccatcgta gtagaacaag ttttaccgga aaggcatttt gtcaatttat ccattctttc
     3601 cttgctaagc gcattactct ctaccgccac agcagccgca ttcgccgcag cattcacatc
     3661 ccccttgctc aacgccgcaa ccgtccctgc tgccagcttc gccttagcaa tgatttttgc
     3721 cctgtccttc acattcaggc tgccagggtc tctgccgtcc agtagggctt cgccgaggat
     3781 ttcaccgacc gccgctccta tcgcgccgtc ctgacacttg cccttattcg ccgccgc
//
LOCUS       DAWITQ010000174         3739 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.174, whole genome shotgun sequence.
ACCESSION   DAWITQ010000174 DAWITQ010000000
VERSION     DAWITQ010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3739)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3739)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3739
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.174"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            100..1215
                     /gene="lst"
                     /locus_tag="WIX18_001918"
     CDS             100..1215
                     /gene="lst"
                     /locus_tag="WIX18_001918"
                     /EC_number="2.4.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyllactosaminide
                     alpha-2,3-sialyltransferase"
                     /protein_id="HEZ5238974.1"
                     /translation="MGLKKACLTVLCLIVFCFGIFYTFDRVNQGERNAVSLLKDKLFN
                     EEGEPVNLIFCYTILQMKVAERIMAQHPGERFYVVLMSENRNEKYDYYFNQIKDKAER
                     AYFFHLPYGLNKSFNFIPTMAELKVKAMLLPKVKRIYLASLEKVSIAAFLSTYPDAEI
                     KTFDDGTINLIQSSSYLGDEFSVNGTIKRNFARMMIGDWSIAKTRNASDEHYTIFKGL
                     KNIMDDGRRKMTYLPLFDASELKAGDETGGTVRILLGSPDKEMKEISEKAAKNFNIQY
                     VAPHPRQTYGLSGVTTLNSPYVIEDYILREIKKNPHTRYEIYTFFSGAALTMKDFPNV
                     HVYALKPASLPEDYWLKPVYALFTQSGIPILTFDDKD"
     gene            complement(1380..1838)
                     /locus_tag="WIX18_001919"
     CDS             complement(1380..1838)
                     /locus_tag="WIX18_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEZ5238975.1"
                     /translation="MKTQISLAAAAITLLLSACGGSGIPSQPKGEISENRTAAFKSMM
                     PDFSRMGKMVKGEEPYDVEKFKQAAAAFAESSKKPFTLFESDPQGNGRALPAVWSDGA
                     KFEAEKTKFAAAVEKLNAAAQTGKLDEIKAAYGETGASCKSCHDSFRAPE"
     gene            1957..2778
                     /locus_tag="WIX18_001920"
     CDS             1957..2778
                     /locus_tag="WIX18_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEZ5238976.1"
                     /translation="MAVLITGASAGFGEAMCRAFVGAGYRVIGAARRADRLQALADEL
                     GALFYPLEMDVSRRESVENALNGIPDEFSDIDCLINNAGLALGLDTADKADFEDWETM
                     IQTNVLGLTFLTRKILPQMVERGGGYVMNLGSIAGNYAYAGSNVYGATKAFVRQFSLN
                     LRAELADKNIRVTNIEPGLCGNTEFSNVRFKGDDEKAAGVYEGVEFIRPEDIAETALW
                     LYRRPAHMNVNTIEIMPVAQTFAGMKVIKKAVPEVREDFEKQSMSLFSRIRSWFK"
     gene            complement(2829..3275)
                     /gene="yciA"
                     /locus_tag="WIX18_001921"
     CDS             complement(2829..3275)
                     /gene="yciA"
                     /locus_tag="WIX18_001921"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HEZ5238977.1"
                     /translation="MQHEEGNRQRPQGELLLRTVAMPRDTNPNQDIFGGWIMSQMDLG
                     GGILAAEIARGRIVTVAVQEMNFIRPVKVGNVVCCYGHCVRVGNTSLQLKVEVWVKTL
                     MNDCVTEDRHLVTEAVFTYVAIDAEGNPRPIPKEGNPKLAGLLPTP"
BASE COUNT          875 a          825 c         1075 g          964 t
ORIGIN      
        1 tattcggtaa ctgtcggaat atctgctaaa attccgcatt tttccgtccc gggacactcg
       61 gggcgtatgt tcaatttgtc ggaatggagt tttagggata tgggcttgaa aaaggcttgt
      121 ttgaccgtgt tgtgcctgat tgttttttgt ttcgggatat tttatacatt tgaccgggta
      181 aatcaggggg aaaggaatgc ggtttccctg ctgaaggaca aactcttcaa tgaagagggg
      241 gaaccggtca atctgatttt ctgctatacc atattgcaga tgaaggtggc ggaaaggatt
      301 atggcgcagc atccggggga gcggttttat gtggtgctga tgtctgagaa caggaatgaa
      361 aaatacgatt attatttcaa tcagataaag gataaggcgg agcgggcgta ttttttccac
      421 ctgccctacg gtttgaacaa atcgtttaat ttcattccga cgatggcgga gctgaaggtg
      481 aaggcaatgc tgctgccgaa ggtcaagcgg atttatttgg caagtttgga aaaagtcagc
      541 attgccgcct ttttgagcac ttacccggat gcggaaatca aaacctttga cgacgggaca
      601 atcaatttaa ttcaaagcag cagctatttg ggtgatgagt tttctgtaaa cgggacgatc
      661 aagcggaatt ttgcccggat gatgatcgga gattggagca tcgccaaaac ccgtaatgct
      721 tccgacgagc attacacgat attcaagggt ttgaaaaaca ttatggacga cggccgccgc
      781 aagatgactt acctgccgct gttcgatgcg tccgaactga aggcggggga cgaaacgggc
      841 ggcacggtgc ggatactttt gggttcgccc gacaaggaga tgaaggaaat ttcggaaaag
      901 gcggcaaaaa acttcaacat acaatatgtc gcaccgcacc cccgccaaac ctacgggctt
      961 tccggcgtaa ccacattaaa ttcgccctat gtcatcgaag actatatttt gcgcgaaatt
     1021 aagaaaaacc cgcatacgag gtatgaaatt tatacctttt tcagcggtgc ggcgttgacg
     1081 atgaaggatt ttcccaatgt gcacgtttac gcattgaaac cggcttccct tccggaagat
     1141 tattggctca agccggtgta tgccctgttt acccaatccg gcatcccgat tttgacattt
     1201 gacgataaag attaatcgca tagcaaatca aaatagaaaa tggcggagtg cgtggggtaa
     1261 aaataaggat agcgtttttt catttggatt gacgataatt tccgattgct ttgcgcgtgc
     1321 tgaaatggca aagaaaatgc cgtctgaagg cttcagacgg cattgttttg ttttggatgt
     1381 tattcgggtg cgcggaaact gtcgtggcag gatttgcagc ttgcgccggt ttcgccgtag
     1441 gcggctttga tttcatccag tttgccggtt tgtgctgcgg cattgagttt ttcgacggcg
     1501 gcggcgaatt ttgttttttc ggcttcaaat tttgcaccat ccgaccaaac ggctggcagg
     1561 gcgcggccgt tgccttgcgg atcggactca aaaagtgtga acggtttctt gctgctttcg
     1621 gcaaacgccg cggcagcctg tttgaatttt tcgacatcgt aaggctcttc gcctttgacc
     1681 attttgccca tacgcgagaa gtcgggcatc atagatttga acgcggcggt gcggttttcg
     1741 gaaatttcgc ctttgggttg ggaaggtatt ccgctgcctc cgcaggcgga aaggagcagt
     1801 gtgatggcgg cagcagcaag gctgatttgg gttttcatat tgaatgtgtc ctgtcgtggt
     1861 ggtatggttg ttgtcatttt cagccggcgc gatgccgtct gaagagcgtt atgatacctg
     1921 aaacaggttt gggaaacgag aaagaaagga aaaacaatgg ctgttttaat taccggtgct
     1981 tcggcaggat tcggcgaagc gatgtgccgc gcgtttgtcg gggcgggata ccgcgttatc
     2041 ggtgcggcgc gtcgtgcgga caggcttcag gccttggcgg atgaattggg tgctttgttt
     2101 taccctttgg aaatggacgt gtcgcgccgc gagtcggtgg aaaacgcctt aaacggcatc
     2161 cccgatgaat tttccgacat cgactgcctc atcaacaatg ccgggctggc tttgggtctg
     2221 gacacggcgg acaaggcgga ttttgaagat tgggaaacga tgattcaaac caatgttttg
     2281 ggtttgacgt tcctgacgcg caaaattttg ccgcaaatgg tggaacgcgg cggcggttat
     2341 gtgatgaatt tgggttcgat tgcaggcaat tatgcttatg ccggcagcaa cgtttacggg
     2401 gcgaccaagg cgtttgtgcg ccagttcagc ctgaatttgc gcgcggagtt ggcggataag
     2461 aacatccgcg ttaccaatat cgagccgggt ttgtgcggca atacggagtt ttccaacgtg
     2521 cgcttcaaag gcgatgacga gaaggcagca ggcgtgtatg agggtgtgga atttatccgc
     2581 ccagaagata ttgcggaaac cgcattgtgg ctgtaccgcc ggccggcgca tatgaatgtg
     2641 aacacgattg aaattatgcc cgtggcgcag acttttgcag gaatgaaagt gataaaaaaa
     2701 gccgtgcccg aagtgcggga agactttgaa aaacaaagta tgtcgctgtt ttcccgcatc
     2761 aggtcttggt tcaaatgatg cggaatgccg tctgaagaca gtttcagacg gcatttttac
     2821 gggtattttt acggagtagg caataagccc gccaatttgg ggttgccttc tttcggaatc
     2881 gggcgcggat tgccttccgc atcgatggcg acataagtga acacggcttc ggttacgagg
     2941 tggcggtctt cggtaacgca atcgttcatc aaagttttca cccagacttc gactttaagc
     3001 tggagggaag tattgcccac gcggacgcaa tgcccgtagc agcagacgac gttgccgacc
     3061 ttgaccgggc ggataaagtt catttcctga acggcgacgg taacgatgcg tccccgcgcg
     3121 atttccgccg ccaatatgcc gccgcccaaa tccatctgcg acataatcca gccgccgaaa
     3181 atgtcttggt tgggattggt atcgcgcggc atagcgacgg tacgcaggag cagttcgcct
     3241 tgagggcgtt ggcggttgcc ttcttcgtgc tgcatcattt ttccttgttt tattgaaata
     3301 taaatcggac ttgcacccct gcccgaaacg ggaagtgcgt agtttaaccc atttgagata
     3361 tacaagggcg ggcgtgggac agattcgcaa ggcgtattgt agggcggggc tgtagagtgg
     3421 gcttcagtcc gccaatcccg ccaaatccta ccctaagcaa ctgaaccgtc attcccacga
     3481 aagtgggaat ctagaatctc gggggttcag tcatttccga tagattcccg ccgcgtcagg
     3541 gggtctggat tcccgcctgc gcgggaatga cgaatccatc catacggaaa cctgcaccac
     3601 gtcattccca cgaaagtggg aatctagaat ctcggggttt cagtcatttc cgatagattc
     3661 ccgccgtgtc agggggtctg gattcccacc tgcgcgggaa tgacgggttt taagattacg
     3721 gtgttgtcgg acggatttc
//
LOCUS       DAWITQ010000175         3721 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.175, whole genome shotgun sequence.
ACCESSION   DAWITQ010000175 DAWITQ010000000
VERSION     DAWITQ010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3721)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3721)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3721
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.175"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            275..619
                     /locus_tag="WIX18_001922"
     CDS             275..619
                     /locus_tag="WIX18_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HEZ5238978.1"
                     /translation="MRTTPTFPTKTFKPAAMALAVATTLSACLGGGGGTSAPDFNAGG
                     TGIGSNSRATTAKSAAVSYAGIKNEMCKDRSMLCAGRDDVAVTDRDAKINAPPRICIP
                     ETLQTQMTHTRI"
     gene            616..3477
                     /locus_tag="WIX18_001923"
     CDS             616..3477
                     /locus_tag="WIX18_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEZ5238979.1"
                     /translation="MINLKPAIEAGYTGRGVEVGIVDTGESVGSISFPELYGRKEHGY
                     NENYKNYTAYMRKEAPEDGDGKDIEASFDDEAVIETEAKPTDIRHVKEIGHIDVVSHI
                     IGGRSVDGRPAGGIAPDATLHIMNTHDGTKNEIMSAAIRNAWVKLGERGVRIVNNSFG
                     TTSRAGTADHFQIANSEEQYRQALLAYSGGDKTDEGIRLMQQSDYGNLSYHIRNKNML
                     FIFSASNDAQAQPNTLTLLPFYEKDAQKGIITVAGVDRSGEKFNGSNHCGITAMWCLS
                     APYEASVRFTRTNPIQIAGTSFSAPIVTGTAALLLQKYPWMSNDNLRTTLLTTAQDIG
                     AVGVDSKFGWGLLDAGKAMNGPASFPFGDFTADTKGTSDIAYSFRNDISGTGGLIKKG
                     GSQLQLHGNNTYTGKTIIEGGSLVLYGNNKSDMRVETKGALIYNGAASGGSLNSDGIV
                     YLADTDRSGANETVHIKGDLQLGGEGTLYTRLGKLLKVDGTAMTGGKLYMSARGKGAG
                     YLNRTGQRVPFLSAAKIGRDYSFFTNIETDGGLLASLDSVEKTAGSEGDTLSYYVRRG
                     NAARTASAAAHSAPAGLKHAVEQGGSNLENLMVELDASESSATPETVETAAADRTDMP
                     GIRPYGATFRAAAAVQHANAADGVRIFNSLAATVYADSTAAHADMQGRRLKAVSDGLD
                     HNGTGLRVIAQTQQDGGTWEQGGVEGKMRGSTQTVGIAAKTGENTTAAATLGMGRSTW
                     SENSANAKTDSISLFAGIRHDAGDIGYLKGLFSYGRYKNSISRSTGADEHAEGSVNGT
                     LMQLGALGGVNVPFAATGDLTVEGGLRYDLLKQDAFAEKGSALGWSGNSLTEGTLVGL
                     AGLKLSQPLSDKAVLFATAGVERDLNGRDYTVTGGFTGATAATGKTGARNMPHTRLVA
                     GLGADVEFGNGWNGLARYSYAGSKQYGNHSGRVGVGYRF"
BASE COUNT         1010 a         1016 c          990 g          705 t
ORIGIN      
        1 atccactata actagggaaa ttcaaattaa gttagaatta tccctatgag aaaaagccgt
       61 ctaagccggt ataaacaaaa taaactcatt gagctatttg tcgaaagttc aaatttccat
      121 tttaaaacaa ttagtaaaat cgagtttatc ctagttgtcc aagacaaccc ctataataat
      181 ataattcaaa atataaaaac gggttacatc taaacattac ggaattttta ttccctcgcc
      241 tgaattctat tgtcagattc aaggagacct catcatgcga acgaccccaa ccttccctac
      301 aaaaactttc aaaccggctg ccatggcgtt agctgttgca acaacacttt ctgcctgctt
      361 aggcggcggc ggcggcactt ctgcgcccga cttcaatgca ggcggcaccg gtatcggcag
      421 caacagcaga gcaacaacag cgaaatcagc agcagtatct tacgccggta tcaagaacga
      481 aatgtgcaaa gacagaagca tgctctgtgc cggtcgggat gacgttgcgg ttacagacag
      541 ggatgccaaa atcaatgccc ccccccgaat ctgcataccg gagactttac aaacccaaat
      601 gacgcataca agaatttgat caacctcaaa cctgcaattg aagcaggcta tacaggacgc
      661 ggggtagagg taggtatcgt cgacacaggc gaatccgtcg gcagcatatc ctttcccgaa
      721 ctgtatggca gaaaagaaca cggctataac gaaaattaca aaaactatac ggcgtatatg
      781 cggaaggaag cgcctgaaga cggagacggt aaagacattg aagcttcttt cgacgatgag
      841 gccgttatag agactgaagc aaagccgacg gatatccgcc acgtaaaaga aatcggacac
      901 atcgatgtgg tctcccatat tattggcggg cgttccgtgg acggcagacc tgcaggcggt
      961 attgcgcccg atgcgacgct acacataatg aatacgcatg atggaaccaa gaacgaaata
     1021 atgtctgcag ccatccgcaa tgcatgggtc aagctgggcg aacgtggcgt gcgcatcgtc
     1081 aataacagtt ttggaacaac atcgagggca ggcactgccg accatttcca aatagccaat
     1141 tcggaggagc agtaccgcca agcgttgctc gcctattccg gcggtgataa aacagacgag
     1201 ggtatccgcc tgatgcaaca gagcgattac ggcaacttgt cctaccacat ccgtaataaa
     1261 aacatgcttt tcattttttc ggcaagcaat gacgcacaag ctcagcccaa cacactgacc
     1321 ctattgccat tttatgaaaa agatgctcaa aaaggcatta tcacagtcgc aggcgtagac
     1381 cgcagtggag aaaagttcaa tggctccaac cattgcggaa ttactgccat gtggtgccta
     1441 tcggcaccct atgaagcaag cgtccgtttc acccgtacaa acccgattca aattgccgga
     1501 acatcctttt ccgcacccat cgtaaccggc acggcggctc tgctgctgca gaaatacccg
     1561 tggatgagca acgacaacct gcgtaccacg ctgctgacaa cggctcagga catcggtgca
     1621 gtcggcgtgg acagcaagtt cggctgggga ctgctggatg cgggtaaggc catgaacgga
     1681 cccgcgtcct ttccgttcgg cgactttacc gccgatacga aaggtacatc cgatattgcc
     1741 tactccttcc gtaacgacat ttcaggcacg ggcggcctga tcaaaaaagg cggcagccaa
     1801 ctgcaactgc acggcaacaa cacctatacg ggcaaaacca ttatcgaagg cggttcgctg
     1861 gtgttgtacg gcaacaacaa atcggatatg cgcgtcgaaa ccaaaggtgc gctgatttat
     1921 aacggggcgg catccggcgg tagcctgaac agcgacggca ttgtctatct ggcagatacc
     1981 gaccgatccg gcgcaaacga aaccgtgcac atcaaaggcg atctgcagct gggcggcgaa
     2041 ggtacgctgt acacacgttt gggcaaactg ctgaaagtgg acggtacggc gatgaccggc
     2101 ggcaagctgt acatgtcggc acgcggcaaa ggggcaggct atctcaaccg taccggacaa
     2161 cgtgttccct tcctgagtgc cgccaaaatc gggcgggatt attctttctt cacaaacatc
     2221 gaaaccgacg gtggtctgct ggcttccctc gacagcgtcg aaaaaacagc gggcagtgaa
     2281 ggcgacacgc tgtcctatta tgtccgtcgc ggcaatgcgg cacggactgc ttcggcagcg
     2341 gcacattccg cgcccgccgg tctgaaacac gccgtagaac agggcggcag caatctggaa
     2401 aacctgatgg tcgaactgga tgcctccgaa tcatccgcaa cacccgagac ggttgaaact
     2461 gcggccgccg accgcacaga tatgccgggc atccgcccct acggcgcaac tttccgcgca
     2521 gcggcagccg tacagcatgc gaatgccgcc gacggtgtac gcatcttcaa cagtctcgcc
     2581 gctaccgtct atgccgacag taccgccgcc catgccgata tgcagggacg ccgcctgaaa
     2641 gccgtatcgg acgggttgga ccacaacggc acgggtctgc gcgtcatcgc gcaaacccaa
     2701 caggacggtg gaacgtggga acagggcggt gttgaaggca aaatgcgcgg cagtacccaa
     2761 accgtcggca ttgccgcgaa aaccggcgaa aatacgacag cagccgccac actgggcatg
     2821 ggacgcagca catggagcga aaacagtgca aatgcaaaaa ccgacagcat tagtctgttt
     2881 gcaggcatac ggcacgatgc gggcgatatc ggctatctca aaggcctgtt ctcctacgga
     2941 cgctacaaaa acagcatcag ccgcagcacc ggtgcggacg aacatgcgga aggcagcgtc
     3001 aacggcacgc tgatgcagct gggcgcactg ggcggtgtca acgttccgtt tgccgcaacg
     3061 ggagatttga cggtcgaagg cggtctgcgc tacgacctgc tcaaacagga tgcattcgcc
     3121 gaaaaaggca gtgctttggg ctggagcggc aacagcctca ctgaaggcac actggtcgga
     3181 ctcgcgggtc tgaagctgtc gcaacccttg agcgataaag ccgtcctgtt tgcaacggcg
     3241 ggcgtggaac gcgacctgaa cggacgcgac tacacggtaa cgggcggctt taccggcgcg
     3301 actgcagcaa ccggcaagac gggggcacgc aatatgccgc acacccgcct ggttgccggt
     3361 ctgggcgcgg atgtcgaatt cggcaacggc tggaacggct tggcacgtta cagctacgcc
     3421 ggttccaaac agtacggcaa ccacagcgga cgagtcggcg taggctaccg gttctgacgg
     3481 acaggaagca gacagccgca aagatcacgg tctttgcggc tgtttcttat gaaaagaaaa
     3541 ccctattcca attgcctgct tctattgttt caagacttct tccaaagatt cggcatcaat
     3601 cagatgtata gcggattaac aaaaatcagg acaaggcggc gaagccgcag acagtacaaa
     3661 tagtacggaa ccgattcact cggtgcttga gcaccttaga gaatcgtttc tttgagctaa
     3721 g
//
LOCUS       DAWITQ010000176         3668 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.176, whole genome shotgun sequence.
ACCESSION   DAWITQ010000176 DAWITQ010000000
VERSION     DAWITQ010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3668)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3668)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3668
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.176"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            1..560
                     /locus_tag="WIX18_001924"
                     /pseudo
     CDS             1..560
                     /locus_tag="WIX18_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242392.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="iron-regulated protein FrpC"
     gene            936..1132
                     /locus_tag="WIX18_001925"
                     /pseudo
     CDS             936..1132
                     /locus_tag="WIX18_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248708.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="iron-regulated protein FrpA"
     gene            1083..3500
                     /locus_tag="WIX18_001926"
     CDS             1083..3500
                     /locus_tag="WIX18_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEZ5238980.1"
                     /translation="METVAAKGFSGSLFDHNGNGIRTATGWVSADDGLLVRDLNGNGI
                     IDNGAELFGDNTKLADGSFAKHGYAALAELDSNGDNIINAADAAFQSLRVWQDLNQDG
                     ISQTNELRTLEELGIQSLDLAYKDVNKNLGNGNTLAQQGSYTKTNGTTAKMGDLLLAA
                     DNLHSRFKDKVELTAEQAKAANLAGIGRLRDLREAAALSGDLANMLKAYSAAETKEAQ
                     LALLDNLIHKWAETDSNWGKKSPMRLSTDWTQTANEGIALTPSQVAQLKKNALVSLSD
                     KAKATIDAARDRIAVLDAYTGQDSNTLYYMSEEDALNIVKVTNDTYDHLAKNIYQNLL
                     FQTRLQPYLNQISFKMENDTFTLDFSGLVQAFNHVKETNPQKAFVDLAEMLAYGELRS
                     WYEGRRLMADYVEEAKKAGKFEDYQKVLGQETVALLAKTSGTQADDILQNVGFGHNKN
                     VSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIRFTD
                     GITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVAT
                     VKKLVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGNDLLNGDAGNDSIYSGNGND
                     TLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVF
                     GEGFGQDTVYNYHVDKNSDTMHFKGFKAADVHFIRSGSDLVLSASEQDNVRISGFFYG
                     ENHRVDTFVFDDAAISNPDFAKYINAGNNLVQSMSVFGSNTAATGGNVDANIQSVQQP
                     LLVTPSA"
BASE COUNT         1125 a          758 c          862 g          923 t
ORIGIN      
        1 tggaaaacct atgggatgat acggtcggta aaaagacccg tttagagaaa tttgatcggg
       61 ttgcactgca acatttcagg caatatgcgc gtctaattaa tgaaaataat ggtagattac
      121 ctaacactag tgaaattgag agaagttact ataaagccgt taccgataat ggcgtttctt
      181 ccagtgcagc tattgattta gttattaatc gttcacttcc ggatatggcg gatggttatt
      241 gggcattagg tttggggata gaagccgaac gtatccacaa tgagcaagca gtaaataatc
      301 cgaacggtag cgaatcggat aatagaaagc agttaatatc tgctttagat aaaggatttg
      361 atggatcttt taaagagaag cattttactt ttttacaatc tgtgataatg gatgtaacaa
      421 agttaggtgt tgaatataca atagatggtt ggcaaaaaat tggaggttgg ggtaatggga
      481 taatcaatga tttatataaa agtgttgcaa aaagagagtg gactggaata tttgagatcg
      541 ttaataataa catcaagcaa ggaaatgaag cttttaaaaa tgaaatcaat agcttggttc
      601 atgatatgaa agctgctggc aaggaatttg gagatgactt aaatacacag tggaataatc
      661 tcactcaggc tgccgaaata atctataatg acatagtaga caatactagt caaggaatag
      721 aaaaaggtgt caaagccatt aaagaattgt ctgaaaaaat gaaaaatgct gcttccgatt
      781 tggctgacgg ttcagcagag aaagctaaac aagtagtgga agatttggct caagccgcca
      841 aagaagcata cgaaaatgcc aaatccacag ccgagaaggc tgctcaagca gctcgagaat
      901 tttttaaggg cttgcccagt tttaaagatc tggccgaaaa atttagagat ctgttcccaa
      961 atccggaagg ctggatcgat gatggtcacc aatgtttcgc tccttgggtt aaagaaacta
     1021 aaaaacgcaa tggcaaatat catgtctacg accccctcgc cctagaccta gacggcgacg
     1081 gcatagaaac agtcgccgcc aaaggctttt caggcagcct cttcgaccat aacggcaacg
     1141 gcatccgcac cgccactggc tgggtttctg ccgatgacgg tttactcgtc cgcgatttga
     1201 acggcaacgg catcatcgac aacggcgcgg aactcttcgg cgacaacacc aaactggcag
     1261 acggttcttt tgccaaacac ggctacgcag ctttggccga attggattca aacggcgaca
     1321 acatcatcaa cgcggcagac gccgcattcc aatccctgcg tgtatggcag gatctcaacc
     1381 aggacggcat ttcccaaacc aacgaactcc gcacccttga agaattgggt attcaatctt
     1441 tggatctcgc ctataaagat gtaaataaaa atctcggtaa cggtaacact ttggctcagc
     1501 aaggcagcta caccaaaaca aacggtacaa ccgcaaaaat gggggattta cttttagcag
     1561 ccgacaacct gcacagccgc ttcaaagaca aagtggaact cactgccgaa caggcaaaag
     1621 ccgccaatct tgcgggcatt ggtcgtctgc gcgatttgcg cgaagctgcc gcattgtccg
     1681 gcgatttggc caatatgctg aaagcttatt ctgccgccga aactaaagaa gcacagttgg
     1741 cattgttaga taatttgatt cacaaatggg cggaaaccga ttcgaactgg ggcaaaaaat
     1801 cgccaatgcg actttcaacc gattggacgc aaacggctaa tgaaggtatt gcactgacac
     1861 catcccaagt agcacaacta aaaaagaacg ctttagtttc cctttctgat aaagctaaag
     1921 caactattga cgccgcccgc gaccgcattg ccgtgcttga tgcctacacg gggcaggatt
     1981 ccaacacact ctattacatg agcgaggaag atgcgcttaa tatcgtcaaa gtaaccaacg
     2041 atacatacga ccatctcgcc aaaaacatct accaaaacct gttattccaa acccgtttgc
     2101 agccatattt gaatcaaatc agtttcaaaa tggaaaatga tacgttcact ttggatttta
     2161 gtggtcttgt tcaagcattt aaccatgtca aagaaactaa tccgcaaaaa gcttttgtgg
     2221 atttggccga gatgcttgca tatggcgaac ttcgttcttg gtatgaaggc cgaagactaa
     2281 tggccgatta tgtggaggag gcaaaaaaag caggtaaatt tgaagattac cagaaagtgt
     2341 tgggtcagga gaccgttgca ttattagcta aaacatcggg tacgcaagca gatgatatcc
     2401 tgcaaaatgt aggctttggt cataataaaa atgtttcttt atatggtaat gacggcaacg
     2461 acactctgat cggcggtgca ggcaatgatt acttggaggg cggcagcggt tcggatactt
     2521 atgtcttcgg caaaggcttc ggtcaggata cggtctataa ttacgactac gctaccggac
     2581 gcaaagacat catccgcttt accgacggta ttacagccga tatgctgact tttacccgag
     2641 agggcaacca tcttcttatc aaggcaaaag acggcagtgg acaagtgact gttcagtcct
     2701 atttccagaa cgatggctca ggtgcttacc gtatcgatga gattcatttc gataacggca
     2761 aagtactgga tgttgccact gtcaaaaaac tggtacagca atccaccgac ggttcggaca
     2821 gattgtatgc ctaccaatcc ggaagtacct taaatggcgg attgggcgat gactatctgt
     2881 acggtgccga cgggaatgac ctgctgaatg gtgatgcagg caacgacagt atctacagtg
     2941 gcaatggcaa tgatacgctc aatggaggag aaggcaacga cgccctgtac ggctataatg
     3001 gtaacgatgc actgaatggt ggcgaaggca atgatcattt gaacggcgaa gacggtaacg
     3061 acactctgat cggcggtgcc ggtaatgatt acttggaggg cggcagcggt tcggatactt
     3121 atgtcttcgg cgaaggcttc ggtcaggata cggtctataa ttaccatgtg gataaaaact
     3181 ctgacactat gcactttaaa ggatttaaag cagcagatgt tcattttatc cgttccggaa
     3241 gtgatttggt gcttagcgct tctgaacaag acaacgtacg tatttccgga ttcttctatg
     3301 gtgaaaacca tcgtgtagat acatttgtct ttgatgatgc agctatcagt aatccagatt
     3361 ttgccaagta tattaatgct ggcaataatt tggtacagtc tatgtctgtg ttcggttcta
     3421 atactgctgc gacaggagga aatgtggatg ccaatataca atccgtacag cagccgttat
     3481 tggtaacgcc atctgcataa ggagcctaat cacattcatg gcttaaactg aaaaacagca
     3541 atcaagttta ttttgattgc tgtttttctt aatattggga taagggtcgt attttaatta
     3601 accttaatcg gtgcacttct agcaatatag tggattcaca aaaaccagta cagcgttgcc
     3661 tcgcctta
//
LOCUS       DAWITQ010000177         3615 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.177, whole genome shotgun sequence.
ACCESSION   DAWITQ010000177 DAWITQ010000000
VERSION     DAWITQ010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3615)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3615)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3615
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.177"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..185)
                     /locus_tag="WIX18_001927"
     CDS             complement(<1..185)
                     /locus_tag="WIX18_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009346381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HEZ5238981.1"
                     /translation="MISACPGFIHSRLGRSVMPSEPAGRLFQKTPYRCNFMRLYGVGF
                     ALQTAYASRSSLVFQSV"
     gene            133..491
                     /locus_tag="WIX18_001928"
                     /pseudo
     CDS             133..491
                     /locus_tag="WIX18_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245152.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            522..3374
                     /gene="gcvP"
                     /locus_tag="WIX18_001929"
     CDS             522..3374
                     /gene="gcvP"
                     /locus_tag="WIX18_001929"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HEZ5238982.1"
                     /translation="MKLSELFNPDEFAARHLSFGDEAALLAAVGEKSMDDFVGNTVPQ
                     SIRMPSELDLPDALTEADALAKLKGIASKNVINKSYIGLGYYPTRVPNVTLRNVLENP
                     GWYTAYTPYQAEIAQGRLEALLNFQQVCIDLTGFPVAGASLLDEATAAAEAMAMAHRV
                     GKVKSERFFVDARVYPQTLDVMKTRAKYFGFELVVGDFAQAEEGEYFGALFQYVGKDG
                     DVQDLQDVIGRLKAKGTIVAVAADIMSLVLLKSPAELGADIALGNTQRFGVPMGFGGP
                     HAAYFAFKDEFKRSAPGRIIGVSKDASGKPALRMALSTREQHIRREKATSNICTAQAL
                     LANLAGMYAVYHGPEGVKRIANRIHALASAFADALVSDGLNVVHKVFFDTVTVDFGNK
                     EKADQVFAAALESGYNLRRVNDTQVAAAFHETSACEDLVDLYRAFTGKDAFAFADDVK
                     GRLNAELLRQDDILQHPVFNRYHTEHEMLRYLKKLEDRDLAMNRSMISLGSCTMKLNA
                     TAEMLPITWAEFSDIHPYAPEAQTVGYRELLADMENSLKAITGFDAISFQPNSGAQGE
                     YSGMLAIRRYQEAQGEAQRNICLIPKSAHGTNPATAAMLGLKVVVVDTDEHGNVNIDD
                     LKAKAEQHRDALSAIMITYPSTHGVYEEGIRDICRIIHENGGQVYMDGANLNAQIGIM
                     QPAEVGADVLHMNLHKTFCIPHGGGGPGMGPIGLKAHLAPFAPGHVVTDMHNASADQT
                     AVAAAAFGSASILPITWMYLTMMGKQGMEQATRWALLNANYVAKRLSEDYPILYTGKN
                     GRVAHECIVDLRPLKAESGITETDIAKRLMDYGFHAPTVSFPVAGTLMIEPTESESKA
                     ELDRFIAALKQIKQEVLKVERGEWPKEDNPLVNAPHTASDVTGEWTHPYSREEAVFPL
                     PFVREHKFWPSVNRVDDVYGDRNLVCSCPPMENYED"
BASE COUNT          850 a         1040 c          937 g          788 t
ORIGIN      
        1 tgaaccgact ggaacaccaa actgcttcgg gacgcatatg ccgtctgaag tgcaaaacct
       61 acgccataca gccgcatgaa gttgcagcgg tatggcgttt tttgaaaaag acggcctgcc
      121 ggttcagacg gcatgaccga ccgtccgagc ctgctgtgga taaagcccgg acaggctgaa
      181 atcatggaat attgcgaacc tgaagaagca tccgacccgt acgcaacata caggcgtgcc
      241 aacctgatgg cgaggctgcc gctgtttgtc gtgattttgg ttctgctcaa tattgttttc
      301 cgcttccggc gcatccctta gcttggctgg tgcctgcagg tttcatggtt ttggtcggcg
      361 gctttccctt atcgctgccg cttgtggcgc tgcttgtcct gacctgctgc attctggcgc
      421 attgtccgcc attatcccgt cttttgtgct acccttgccc gaatcatccg atgtctaaaa
      481 attctgcctg atggcagccc tacaaacccg aaggagtaga aatgaaactg tccgaactgt
      541 tcaaccccga cgaatttgcc gcgcggcatt tgagtttcgg cgacgaagcg gcgttgcttg
      601 ccgctgtcgg cgagaaaagt atggacgatt ttgtcggcaa caccgtgccg caaagcatcc
      661 gtatgccgtc cgaactcgat ttgcccgatg ccctgaccga agcggacgcg ttggcaaaat
      721 tgaaaggcat tgcgtcgaaa aacgtgatca acaagtccta tatcggttta ggctattacc
      781 cgacccgcgt gccgaatgtg actttgcgca acgtattgga aaatccgggc tggtataccg
      841 cctacacgcc gtatcaggcg gaaatcgcgc agggtcgttt ggaagcattg ttgaacttcc
      901 aacaagtgtg catcgatttg accggttttc ccgtggcggg cgcgtctttg ctggacgagg
      961 caactgccgc ggctgaagcg atggcgatgg cgcaccgagt gggcaaagtg aaatccgaac
     1021 gtttctttgt ggatgcgcgc gtgtatccgc aaactttgga cgtgatgaaa acccgcgcca
     1081 aatatttcgg ctttgaattg gtggtcggtg attttgccca agcggaggaa ggcgaatact
     1141 tcggtgcgct gttccaatac gtcggcaaag acggcgatgt gcaagacttg caggacgtta
     1201 tcggccgtct gaaagccaaa ggcacaatcg ttgccgttgc agccgacatt atgagcttgg
     1261 ttttgctgaa gtctccggct gaactaggtg cggatattgc tttgggcaac acgcaacgct
     1321 tcggcgtgcc tatgggcttt ggtggtccgc acgccgctta tttcgcgttt aaagacgagt
     1381 tcaaacgttc cgccccgggc cgcatcatcg gcgtatccaa agacgcatca ggcaaacctg
     1441 ccttgcgcat ggcgttgtcc acccgcgagc aacacatccg ccgcgaaaaa gcgacatcca
     1501 atatttgtac cgcgcaggca ttgctggcga acttggcggg tatgtacgcc gtttaccacg
     1561 gccctgaagg tgtgaaacgc atcgccaacc gcattcacgc gctggcttct gcctttgccg
     1621 atgcgctggt ttcagacggc ctgaatgtgg ttcataaggt cttcttcgat accgttaccg
     1681 tcgatttcgg caacaaagag aaagcagacc aagtgtttgc cgctgctttg gaatcgggct
     1741 ataacctgcg ccgcgttaac gatactcaag ttgcggctgc attccacgaa acatcggcat
     1801 gcgaagattt ggttgatttg taccgcgcgt ttaccggcaa ggatgcgttc gcatttgccg
     1861 atgatgtcaa aggccgtctg aacgccgaat tgctgcgtca agatgacatt ctgcaacatc
     1921 ctgtgttcaa ccgttaccac accgaacacg aaatgttgcg ctatctgaaa aaactcgaag
     1981 accgcgattt ggcgatgaac cgcagcatga tttcgctcgg tagctgcacc atgaaactca
     2041 acgcgactgc ggaaatgctg ccgattactt gggcggagtt ctccgacatc cacccttacg
     2101 ctcccgaagc gcaaaccgtc ggctaccgcg aattgcttgc cgatatggaa aacagcctga
     2161 aagccatcac cggctttgac gcaatttcct tccagcccaa ctccggcgcg cagggcgaat
     2221 acagcggtat gcttgccatc cgccgctatc aggaagcgca aggcgaagcg cagcgcaaca
     2281 tctgcctgat tcccaaatcc gcccacggca ccaaccccgc caccgccgcc atgctcggtt
     2341 tgaaagtcgt cgtcgtcgat accgacgaac acggcaacgt caacatcgac gatttgaaag
     2401 ccaaagccga gcaacaccgc gacgctttgt ccgccatcat gattacctat ccgtccaccc
     2461 acggcgtgta cgaagaaggc atccgcgaca tctgccgcat catccatgaa aacggcggac
     2521 aggtttatat ggacggcgcc aacctcaacg ctcaaatcgg catcatgcag cctgccgaag
     2581 tcggcgcgga cgtgttgcac atgaacctgc acaaaacctt ctgtatccct cacggcggcg
     2641 gcggcccggg catgggtccg attggcttga aagcccatct ggctccgttc gcaccaggcc
     2701 atgtggtaac cgatatgcac aacgccagtg ccgatcaaac tgccgtggct gccgcagctt
     2761 tcggttctgc gtccatcctg ccgattactt ggatgtacct gaccatgatg ggcaaacaag
     2821 gcatggagca ggcaacacgc tgggcattgc tcaacgccaa ctacgttgcc aaacgcttga
     2881 gcgaagacta tccgattctg tatacaggca aaaacggccg cgtcgcgcac gaatgtatcg
     2941 tcgacttgcg tccgctcaaa gccgaaagcg gcattaccga aaccgacatc gccaaacgcc
     3001 tgatggacta cggcttccac gccccgaccg tctccttccc cgttgccggc acgctgatga
     3061 tcgagccgac cgaaagcgag agcaaagccg aactcgaccg cttcatcgcc gccctgaaac
     3121 aaatcaaaca ggaagtgttg aaagtcgagc gcggcgaatg gccgaaagag gacaacccgt
     3181 tggtgaacgc tccgcatacc gcatccgacg taactggcga atggacgcat ccgtattccc
     3241 gcgaagaagc cgtcttccca ttgccgttcg tccgcgaaca caaattctgg ccgagcgtca
     3301 accgtgtgga cgacgtgtac ggcgaccgca atctcgtgtg cagctgccca ccgatggaaa
     3361 attatgaaga ctgaccgttg aaaccccgaa gacaaatgcc gtctgaaaca ctttcagacg
     3421 gcattttcgt cgacggcaga ctggttgcac caatacacgt atctcgacta taactttaaa
     3481 acaaatgagt taaaccagta tccatacatc agctttttta tcatcctact ttttattcat
     3541 ccgatcgtgc aaacagattt caaagatgaa aagcctattc acaccctttg atgtcatttc
     3601 cacacggaca aacaa
//
LOCUS       DAWITQ010000178         3523 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.178, whole genome shotgun sequence.
ACCESSION   DAWITQ010000178 DAWITQ010000000
VERSION     DAWITQ010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3523)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3523)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3523
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.178"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            186..1061
                     /locus_tag="WIX18_001930"
     CDS             186..1061
                     /locus_tag="WIX18_001930"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEZ5238983.1"
                     /translation="MLQGSLVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGT
                     TGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADFTLS
                     VVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAEIPNIVGV
                     KEASGNIGSNIELINRAPEGFVVLSGDDHTALPFMLCGGHGVITVAANAAPKLFADMC
                     RAALQGDIALARKLNDRLIPIYDTMFCEPSPAAPKWAVSALGRCEPHVRLPLVPLTEG
                     GQAKVRAALKASGQL"
     gene            1070..2266
                     /gene="bamC"
                     /locus_tag="WIX18_001931"
     CDS             1070..2266
                     /gene="bamC"
                     /locus_tag="WIX18_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HEZ5238984.1"
                     /translation="MPSEPFGRHNATNTLISITQDDTMTLIKPVIAALALIGLAACSG
                     SKTEQPKLDYQSRSHRLIKLEVPPDLNNPDQGSLYRLPAGSGAVRASDLEKRRTPAVQ
                     QPADAEVLKSVKGVRLERDGSQRWLVVDGKSPAEIWPLLKAFWQENGFDIKSEEPAIG
                     QMETEWAENRAKIPQDSLRRLFDTVGLGGIYSTGERDKFIVRIEQGKNGVSDIFFAHK
                     AMKEVYGGKDKDTTVWQPSPSDPNLEAAFLTRFMQYLGVDGQQAENASAKNPTLPAAN
                     EMARIEGKSLIVFGDYGRNWRRTALALDRIGLTVVGQNTERHAFLVQKAPNESNAVTE
                     QKPGLFKRLLGKGKAEKPAEQPELIVYAEPVANGSRIVLLNKDGSAYAGKDASALLGK
                     LHSELR"
     gene            complement(2323..3255)
                     /gene="pip"
                     /locus_tag="WIX18_001932"
     CDS             complement(2323..3255)
                     /gene="pip"
                     /locus_tag="WIX18_001932"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HEZ5238985.1"
                     /translation="MYEIKQPFHSGYLQVSEIHQIYWEESGNPDGVPVIFLHGGPGAG
                     ASPECRGFFNPDVFRIVIIDQRGCGRSRPYACAEDNTTWDLVADIEKVREMLGIRKWL
                     VFGGSWGSTLSLAYAQTHPERVKGLVLRGIFLCRPSETAWLNEAGGVSRIYPEQWQKF
                     VAPIAENRRNRLIEAYHGLLFHQDEEVCLSAAKAWADWESYLIRFEPEEVDEDAYASL
                     AIARLENHYFVNGGWLQGDRAILNNIGKIRNIPTIIVQGRYDLCTPMQSAWALSKAFP
                     EAELRVVQAGHRAFDPPLADALVQAVEDILPRLL"
BASE COUNT          930 a         1158 c          788 g          647 t
ORIGIN      
        1 cgacggcacc ggcataaacc ggcgaatata ataaaatgat ttcaaacagg aaaaatcaat
       61 ttccaccata cctttcggcg caaacgcccc acatctgcaa cccgccggat ttcacacctg
      121 cggtaaagta ggctacaatc agaagcatta ccgcccccta caccacaact gataaaaggt
      181 tctgtatgtt acaaggtagc ctggttgccc tgattacccc gatgaatcaa gacggcagca
      241 tccattacga acaactccgc gatttgatcg actggcacat tgaaaacggc acggacggca
      301 tcgttgccgt cggcacgaca ggcgaatccg ccaccctctc cgtcgaagaa cacaccgccg
      361 tcatcgaagc cgtcgtcaaa cacgttgcca aacgcgtccc cgtcatcgcc ggcacagggg
      421 caaacaacac cgtcgaagcc atcgcccttt cccaagccgc cgaaaaagcc ggtgcagact
      481 tcactctctc cgtcgtcccc tattacaaca agccctccca agaaggcatt taccaacatt
      541 tcaaaaccat cgccgaagcc acttcgattc cgatgattat ctacaacgtg cccggccgta
      601 ccgtcgtcag catgactaac gacactatcc tgcgccttgc cgaaatcccc aacatcgtcg
      661 gcgtgaaaga agccagcggc aacatcggca gcaacatcga actcatcaac cgcgcgcccg
      721 aaggcttcgt cgtcctttcc ggcgacgacc ataccgccct gccgttcatg ctgtgcggcg
      781 gacacggcgt gattaccgta gccgccaacg ccgcacccaa gctctttgcc gatatgtgcc
      841 gcgccgcgct gcaaggcgac attgccctcg cacgcaagct caatgaccgg ctgattccga
      901 tttacgacac catgttctgc gaacccagcc ccgccgcacc gaaatgggcg gtatccgccc
      961 tgggcagatg cgaaccgcac gtccgcctgc cgctcgttcc gctgacggaa ggcggacagg
     1021 caaaagtccg cgccgccctg aaagcctcag gacaactcta aatataacta tgccgtctga
     1081 accgttcgga cggcataacg caacaaacac tttaatatcc atcacacagg atgacacgat
     1141 gacccttatc aaacccgtca ttgccgcgct cgcactcatc gggcttgccg cctgctccgg
     1201 cagcaaaacc gaacagccca agctcgacta ccaaagccgg tcgcaccgcc tgatcaaact
     1261 tgaagtccca cccgatttga acaaccccga ccaaggcagc ctctaccgcc tgcctgccgg
     1321 ttcgggagcc gtccgcgcca gcgatttgga aaaacgccgc acacccgccg tccaacagcc
     1381 tgccgatgcc gaagtattga aaagcgtcaa aggtgtccgc ctcgagcgcg acggcagcca
     1441 acgttggctt gtcgttgacg gcaaatcccc tgccgaaatc tggccgcttc tgaaagcctt
     1501 ttggcaggaa aacggcttcg acatcaaatc cgaagaaccc gccatcggac aaatggaaac
     1561 cgagtgggcg gaaaaccgtg ccaaaatccc ccaagacagc ttgcgccgcc tattcgacac
     1621 agtcggtttg ggcggcatct actccaccgg cgagcgcgac aaattcatcg tccgtatcga
     1681 acagggcaaa aacggcgttt ccgacatctt cttcgcccac aaagccatga aagaagtgta
     1741 cggcggcaaa gacaaagaca cgaccgtatg gcagccctcc ccgtccgatc ccaacctcga
     1801 agccgctttc ctgacgcgct ttatgcaata tttgggcgtt gacggacagc aggcggaaaa
     1861 cgcatcggca aaaaacccga ccctgcccgc cgccaacgaa atggcgcgta tcgaaggcaa
     1921 aagcctgatt gtctttggcg actacggcag aaactggcgg cgcaccgcgc tcgccctcga
     1981 ccgcatcggg ctgaccgtcg tcggtcaaaa caccgaacgc cacgctttcc tggttcaaaa
     2041 agccccgaac gaaagcaatg cagttaccga acaaaaaccc ggcctgttca aacgcctgct
     2101 gggcaaaggc aaagcggaga aacctgccga acagccggaa ctgattgtct atgccgagcc
     2161 tgtcgccaac ggctcgcgca tcgtcctgct caacaaagac ggcagcgcat atgccggcaa
     2221 agacgcatcc gcattattgg gcaaactcca ttccgaactg cgttaaacca ttcaaaacaa
     2281 aagcagcttc caaacagaag ctgctttttt atgcggaact ttttacaaca aacggggcaa
     2341 aatatcctca accgcctgaa ccagcgcatc cgccaaaggc ggatcgaacg cacgatgccc
     2401 tgcctgaacc accctcaatt ccgcttccgg aaaggctttc gacagcgccc acgcactctg
     2461 catcggcgta cacaaatcat accgcccctg cacgataatg gtcgggatat tccgtatttt
     2521 gccgatattg ttcaaaatcg ccctatcgcc ctgcaaccag ccgccgttga caaaataatg
     2581 gttttccaaa cgcgcgattg ccagcgaggc ataagcatct tcatccactt cctccggctc
     2641 gaaacggatc agatagcttt cccaatccgc ccaagccttt gcggcagaca ggcacacttc
     2701 ttcatcttga tgaaacagca acccgtgata cgcctcaatc agccggttcc gtcgattttc
     2761 agcaatcggc gcgacaaatt tttgccattg ttccggataa atccggctca caccgcccgc
     2821 ctcgttcagc cacgccgttt cagacggcct gcacaaaaat atcccgcgca ataccaatcc
     2881 ctttacccgt tcaggatggg tttgggcata agccagcgac aaagtgctgc cccacgaacc
     2941 gccgaacacc agccatttcc tgatacccag catttcacgg actttttcaa tatccgccac
     3001 caaatcccaa gtcgtattgt cttccgcaca agcatacggg cgcgaacgtc cgcaaccgcg
     3061 ctggtcgatg atgacgatgc ggaacacatc gggattgaaa aaaccccgac attcaggcga
     3121 agcccccgcg cccggcccgc catgtaaaaa aataaccggc acaccgtcgg gattgcccga
     3181 ttcctcccaa taaatttgat gaatttcaga cacctgcaag tatccgctat gaaaaggctg
     3241 ttttatctca tacatcatct tctcccatat tgcttctgac aatccgaaca ttcccacacg
     3301 caacatcacg cacgagacac aagccgcccc gaaaggcaaa tgccgaaaaa tcgcgatata
     3361 gtgaattaac aaaaatcagg acaaggcggc gagccgcaga cagtacggat agtacggaac
     3421 cgattcactc gtgcttaagc accttagaga atcattctct ttgagctaag gcgaggcaac
     3481 gccgtaccgg tttttgttaa tccactataa cagcaaccct gtc
//
LOCUS       DAWITQ010000179         3480 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.179, whole genome shotgun sequence.
ACCESSION   DAWITQ010000179 DAWITQ010000000
VERSION     DAWITQ010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3480)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3480)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3480
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.179"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(1022..1792)
                     /gene="xth"
                     /locus_tag="WIX18_001933"
     CDS             complement(1022..1792)
                     /gene="xth"
                     /locus_tag="WIX18_001933"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEZ5238986.1"
                     /translation="MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPA
                     AALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGGVRVI
                     NVYCVNGEALDSPKFKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPE
                     KWHEKIHCSSVERQWFKNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDH
                     ILVSPAMAAALKDVRVDLETRALERPSDHAPVTAEFDW"
     gene            complement(1852..2133)
                     /locus_tag="WIX18_001934"
                     /pseudo
     CDS             complement(1852..2133)
                     /locus_tag="WIX18_001934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709912.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
     gene            complement(2225..2511)
                     /locus_tag="WIX18_001935"
                     /pseudo
     CDS             complement(2225..2511)
                     /locus_tag="WIX18_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009346305.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2539..3420)
                     /gene="nadC"
                     /locus_tag="WIX18_001936"
     CDS             complement(2539..3420)
                     /gene="nadC"
                     /locus_tag="WIX18_001936"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HEZ5238987.1"
                     /translation="MPSENTLFPLPDTLLRPMVEQALSEDLGRRGDITSAAVIAPEKT
                     AKLFLVSREDGVIAGMDLARLAFQTMDPSVRFQAEIRDGQVVRAGQTLAAVEGNARAL
                     LAAERTALNYLTHLSGIATATARAVAEVAEYGTDIVCSRKTIPLLRVLQKYAVRAGGG
                     VNHRMGLDDAVLIKDNHLAYCGSIAQAVRQAKQAVGPLTCVEIEVDTLAQLDEAIAAG
                     AERILLDNMDDETLKEAANRCHTQTAHPHTVYCEASGGIGFDRLKRVAQTGVDGIALG
                     YLTHSSRSLDIGLDFLA"
BASE COUNT          851 a          837 c          871 g          921 t
ORIGIN      
        1 tgaaactgat gcagatatag tggattaaca aaaatcagga caaggcgacg aagccgcaga
       61 cagtacaaat agtacggcaa cgctgtactg gtttaaattt aatccactat attttgtaat
      121 agctgccatt atgcctacta ggatatatac cttctatata atccttattt aaataaaaac
      181 ccttataaaa atctgtgtta tctgtcggga ttgaaaaaaa gattttatct ttctcatcag
      241 gtttatattt gctatcaata tcaaaaagag aataaggatt acaatgagtt cgacatacta
      301 ggtaaaaatt tatatcttgg atcatgaaat attcgatatt tatcaggatc gaaagatgct
      361 aaaaattcat caatatcggt actggatatt ttgtcatcac taataaacat cgctagagat
      421 gggcgacttt gattttccat ttgttgatta gtaaaggata taaatactaa cttgccattg
      481 tcaaaccaca tagatttata tagtggatta aatttaaacc agtacgtcgt tgcctcgcct
      541 tgccgtacta tttgtactgt ctgcggcttc gtcgccttgt cctgattttt gttaatccac
      601 tatagttatt gcctttggga gaatcaattc tgacagcaca taacataggt tcatctttac
      661 agtcgttata ttgggtttca tcaaactcaa ctgcatagca caataaaggc aataggaaaa
      721 aaaggagatt aatttattac tatacataag gcagcctgac tattcattct aaaataaatc
      781 cggtttttaa tatttgattc tgctccggat tatatacata ataaatttta ctgctccaaa
      841 atctgatatt aaccctatgg atttcataaa tttttcagaa aaataggctg tgcttgaaca
      901 atccgccgac tccggctgtt tgtcagggaa aaggcaatta ttttcggtta gtcagcagcc
      961 tatcctattg aatcacttaa agatatggat gtttgtcaac gccatatcaa aacacggtct
     1021 tttaccaatc gaattctgcc gtcaccggcg cgtggtcgct cggacgctcc agcgcgcgcg
     1081 tctccaaatc aacgcggaca tccttcaacg ccgccgccat cgcaggcgac accaaaatat
     1141 ggtcgatacg caggcccagt ttgcgttgga acatcgcgcc gcgatagtcg aaccaggtat
     1201 agaacgcgcc ttcgggatgg acttggcgca ggctgtcggt cagtcccaaa tccagcaggt
     1261 ttttgaacca ctgccgttcg acggacgaac agtggatttt ttcgtgccat ttttcagggt
     1321 cgtaacagtc cgcatcggca ggcgcgatat tgaaatcgcc cagtagcacc agtttgccgt
     1381 agcgggtcat ttcatcgcgg acaaattcgg ttaacgcggc aaaccattgt tctttatatt
     1441 tgaatttcgg gctgtcgagg gcttcgccgt tgacgcaata gacattgatg acgcgcacac
     1501 cgccgacggt tgccgcaatc acgcgccgtt gcggatcgtc cggcagcgcg ggcagcccga
     1561 tatgcacgtc ttccggcgcg ttgcggctga cgattgccac gccgttgtag gttttctgcc
     1621 cgctccaaac acagtgccag cccatcattt gcaaagcggc ggccggaaat ttgtcctgat
     1681 cgagtttgag ttcctgcaaa accaaaatat cgggcggatt gtcggcaagc aggttttgca
     1741 cctgcggcag ccgcacattg agcgaattga cgttccaagt ggtgattttc ataacatttc
     1801 cgaaaaatgc cgtctgaaac gttcagacgg caaaaggaaa ggattttaac actataccgc
     1861 gcgtttgttt tccaaatcgc ggattgtccg cagaatcgtt gccgcgtctt cggaaatcag
     1921 gcggtattcg ataatgcggt gctaacgcgt aaagtccacc agaccttcca cgcgcagtcg
     1981 gctcaaatgg ttggaaaccg ctgtcgcagg catggacagg gattcggaca gctcggcaat
     2041 attgcaatcg ccgtccaaca gttggagcag tatcgccata cgttcgggat gcgccataag
     2101 tttgagtatg gtgtggagcg gtattgtgtt catcggtatt cctaaaacct tttccgcccg
     2161 ccaagcggat tgacgggcgg cagatatgga tgattgtgat tatctttata aattatatta
     2221 taaatcaatt atttatatat gattgtacag gattgtatgt tccttttacc actatttttg
     2281 caaacacgcg taaaggcggg ctttcagaca gcataaaact gccgcgcccg tcctttcccc
     2341 tgccctgccg atgcctccgc gctgtcgggc aaacaaaata cctgcctgaa acgctgtttt
     2401 ttctaaagca tcacgacctt cacgaaaaat gccgtctgaa gaatatttca gacggcattt
     2461 cctccttgag gcaataaccg gattacggtt aggcggttcc ttgtctgaca tatcagacaa
     2521 ctgccgacac cctaaaactc atgccaagaa atccaaacct atgtccaacg aacggctgct
     2581 gtgggtcaga tagccgagag cgatgccgtc cacgccggtt tgcgccacgc gcttcagtcg
     2641 gtcgaagccg atgccgcccg atgcttcgca atagacggtg tgggggtggg cggtttgcgt
     2701 gtggcagcgg tttgccgctt ctttcagggt ttcgtcgtcc atgttgtcca gcaaaatccg
     2761 ttccgcgccc gctgcgatgg cttcgtccag ttgtgccaac gtgtccactt cgatttctac
     2821 acaagtcaac ggtccgaccg cctgttttgc ctgccgaacg gcttgggcga tgctgccgca
     2881 ataggcgagg tggttgtctt tgatgagcac ggcgtcgtcc aagcccatgc ggtggttcac
     2941 gccgccgcct gccctgacgg cgtatttttg caggacgcgc agcaggggga tggttttgcg
     3001 gctgcacacg atgtctgtac cgtattcggc gacttcggca acggcacgcg cggtggcggt
     3061 ggcgatgccg cttaagtgcg tgaggtagtt gagcgcggtg cgttcggcgg cgagcagcgc
     3121 gcgggcgttg ccttcgacgg cggcaagcgt ctgacctgcg cggacgactt gcccgtctcg
     3181 gatttcggct tggaagcgaa cggacggatc catcgtctga aaggcgaggc gcgccaagtc
     3241 catgccggcg ataacgccgt cttcgcggct gacgaggaag agtttggcgg ttttttcggg
     3301 ggcgataacg gcggcggacg taatatcgcc gcgcctgccc aaatcttcgc tcaaggcttg
     3361 ttccaccatg gggcgcaaca gggtgtcggg cagggggaag agggtgtttt cagacggcat
     3421 ggtgtttcct ttgttgaaaa agattgatat tgcccgatgg ggcaaaactt cattttatag
//
LOCUS       DAWITQ010000180         3478 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.180, whole genome shotgun sequence.
ACCESSION   DAWITQ010000180 DAWITQ010000000
VERSION     DAWITQ010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3478)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3478)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3478
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.180"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..159
                     /locus_tag="WIX18_001937"
     CDS             <1..159
                     /locus_tag="WIX18_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238988.1"
                     /translation="ALKFDQLILEFPERGDGAWVHIGFRRNSPQRNQILTATKKNGKT
                     VYLPGLHP"
     gene            171..680
                     /locus_tag="WIX18_001938"
     CDS             171..680
                     /locus_tag="WIX18_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238989.1"
                     /translation="MDILLKYWKPVGVLLLIVLIFTAWHFDRAEKYRMGREAAAAEIS
                     NRLKDGYIEQAKQARSAEQKAAAAFAERQTKLEEEKQNAEKTVAAMRLELNRLRHYAA
                     AQNRSRNLPATTTAATASDGASDSQGWLLFGQCAEKYAGLAETADGHAADLREWQAYG
                     HAVSSQRAE"
     gene            complement(733..1080)
                     /locus_tag="WIX18_001939"
     CDS             complement(733..1080)
                     /locus_tag="WIX18_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HEZ5238990.1"
                     /translation="MYIPDKGDIFHLNFDPSGGKEIKGGRFALALSPKAFNRATGLVF
                     ACPISQGNAAAARSGGMISTLLGAGTETQGNVHCHQLKSLDWQIRKASFKETVPDYVL
                     DDVLARIGAVLFD"
     gene            complement(1082..1318)
                     /locus_tag="WIX18_001940"
     CDS             complement(1082..1318)
                     /locus_tag="WIX18_001940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HEZ5238991.1"
                     /translation="MLRVQKWGNSAAVRLPADMLKQLDFKIGDALVAEVHNGELRVRA
                     ARRFRLADLLAEMEETPPRVEGWEILDDVGNEVV"
     gene            complement(1677..2168)
                     /locus_tag="WIX18_001941"
     CDS             complement(1677..2168)
                     /locus_tag="WIX18_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4760 domain-containing protein"
                     /protein_id="HEZ5238992.1"
                     /translation="MFWQLTVVSVTAVIALGTIFINKKTSKQKATLDVILNDYQDAQF
                     VEADNHISPYIRGTAVDDNNARIDLYEIYQNKGGQWEKERGHLLTVINRHEFYACEIN
                     SGVLDEDLFKRLHCTNFIKLWNAVSPLVMKIREEERKDTIFRELEILVALWKANPLKA
                     SDL"
     gene            complement(2420..2590)
                     /locus_tag="WIX18_001942"
     CDS             complement(2420..2590)
                     /locus_tag="WIX18_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5238993.1"
                     /translation="MPSEIQTAFLLKGFSSTALHKGGFFMPSESPSDGIGLHGRSSPA
                     FKQERMSRMPDF"
     gene            complement(2606..2974)
                     /locus_tag="WIX18_001943"
     CDS             complement(2606..2974)
                     /locus_tag="WIX18_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system death-on-curing
                     family toxin"
                     /protein_id="HEZ5238994.1"
                     /translation="MIDGELVALIHQTVLADEAGLKGRADMARLDGALSRIANWRQYE
                     NLEDIYEIAALYAQAIAKAHAFPDGNKRTALLTMLTYLDLQGISIAADQGLDDLIVSL
                     AAGETDFKQLAETLRRLDKE"
BASE COUNT          889 a          843 c          799 g          947 t
ORIGIN      
        1 gcgctgaaat tcgaccagtt gatactcgaa tttcccgagc gcggggacgg cgcatgggta
       61 cacatcggtt tccgacgcaa cagcccgcaa cgcaaccaga tactgaccgc aaccaagaaa
      121 aacggcaaaa ccgtgtatct gcccgggctg catccttgag gtcatctgaa atggatattt
      181 tattgaaata ctggaagccg gtaggcgtat tgctgctgat agtcctgatt tttaccgcat
      241 ggcatttcga ccgtgccgaa aaataccgca tgggacggga ggctgctgct gccgaaattt
      301 cgaatcgtct gaaagacggc tatatcgagc aggcaaagca ggcgcgttct gccgagcaga
      361 aggccgctgc cgcgtttgcc gaacgacaaa ccaaattaga agaggaaaaa caaaatgctg
      421 aaaaaactgt tgccgctatg cgtcttgagc ttaaccgcct gcgccactac gccgccgccc
      481 aaaatcgcag cagaaacctg cccgcaacca ctaccgccgc caccgcatct gatggcgcgt
      541 cagattccca aggctggcta ttattcggac agtgcgctga aaaatatgca ggactggcag
      601 aaacagccga cggacatgca gccgatttaa gggaatggca ggcatatggt catgcagtaa
      661 gcagtcagcg tgccgaataa gcaaccgccc gaacctgtaa gaaaagatta caggttcggg
      721 cggtttcagc atttaatcga ataagacggc gccgatgcgc gccagcacat cgtccaatac
      781 ataatcgggt acagtttctt taaaagaagc cttgcggatt tgccagtcca gagatttgag
      841 ctggtggcag tggacattgc cctgcgtttc cgttcctgca ccgagtaagg ttgaaatcat
      901 gccgccgctt cgtgcagccg ctgcattccc ctgtgaaatg gggcaggcaa aaaccaatcc
      961 cgttgcgcgg ttgaatgctt ttggagacag agccagcgca aaccgcccgc ccttgatttc
     1021 cttgccgccg gaagggtcga aattcaaatg gaaaatatcg cctttgtcgg gaatatacat
     1081 ttcagacgac ctcgttgccg acatcatcca agatttccca gccttctacg cgcggcgggg
     1141 tttcttccat ttcggcaagc aagtctgcca agcggaaacg tcgggcagca cgcacacgga
     1201 gttcgccgtt atgtacttcc gctaccaaag cgtcgccgat tttaaaatcc aattgtttca
     1261 gcatgtcggc aggcagtcgg acggccgccg agttccccca tttttggaca cgcaacataa
     1321 tcttcacctt tattgtatct acaaagtaga tacatattac cataaaattt cagttgttca
     1381 aatacttgtg cagaatacgc caaaagccgt ccgaactgtt tcggacggct tttgtactgt
     1441 atttgcgcct tcaggcaata ttttgttatc cattttcaag atgcaaaagc tttctaattg
     1501 cttgatgtcg gatttcggtt gtttagggat acaaaaccaa gtaaactaaa actgtttgat
     1561 tggaaaatgc tccgcaagga gaaaattatg ttcaaaaaat cactttataa ggctgctttg
     1621 gcgtatttcg gcgattgcgt ggctgcccat atttcagaac agttttgact gtttattcac
     1681 aaatcagatg cctttagggg gtttgctttc cataatgcaa ccaaaatttc caactctcta
     1741 aatattgtgt ctttgcgttc ttcttcgcgt attttcataa caagaggcga aactgcattc
     1801 cacaatttta tgaagttggt gcaatgcagc cgtttaaaca aatcctcatc caatactccc
     1861 gagttgattt cgcacgcata aaactcgtgc cgattgatta cggtaagtaa atgccctctc
     1921 tctttttccc attgtccgcc cttattttga taaatttcat acaggtcgat ccgcgcgttg
     1981 ttgtcgtcaa ctgccgtgcc gcgaatataa ggcgaaatat gattgtcggc ttctacaaat
     2041 tgtgcatctt ggtaatcatt caaaataaca tctaatgtcg ccttttgctt tgaagttttc
     2101 ttattgatga atattgtccc cagtgcaatg acggcggtta ctgaaacaac ggtcagttgc
     2161 caaaacatca gccattcggc cgtccctcat aggttaaact gtacgctgtg cctgaatatg
     2221 taaaataaag tgaatacaga tacaaacaag gaggttaggg caattactga caaccaacct
     2281 ccttgtttta tttgtttccg caccttacca gccattaaaa ccctcatttt tgtatttcat
     2341 cgtatttcct taatggttgt aaccttgctt gtcgatatct gtatattaat gccgtgcgcc
     2401 cgttctttca aggggtgatt taaaaatcag gcatccttga catcctctcc tgcttaaagg
     2461 cgggggaact cctgccgtgt aaaccaatgc cgtctgaagg gctttcagac ggcataaaaa
     2521 aaccgccttt gtgtaaagcg gttgaagaaa agcctttcaa taaaaatgcc gtctgaattt
     2581 cagacggcat tgttgtcgga tatgcctatt ccttatccag tcggcgcagg gtttcggcga
     2641 gctgtttgaa gtcggtttcc cccgccgcca aactgacaat caagtcgtca agcccttggt
     2701 cggcggcaat gctgatgccc tgcaaatcca gataggtcaa cattgttaaa agcgcggtgc
     2761 gcttgttgcc gtcgggaaag gcgtgggctt tggctatggc ttgtgcataa agggcggcga
     2821 tttcgtagat gtcctcaagg ttttcatact gccgccagtt ggcaatccgc gacaatgcgc
     2881 cgtcgagccg cgccatatcc gcccgccctt tcaaacccgc ttcatccgcc aatacggttt
     2941 gatggataag cgcgaccagt tcgccgtcta tcatttgtcg gcaagtgcct tgacggcttt
     3001 ttgatgggtt ttggcaatgc ggcgggcggc ggcaagcagt acgcgtttgc ctgcttcgcc
     3061 tttaagctcg attttgacgg ggcgtgtatt ttggttttgc atcgctgctc cttgtctgtt
     3121 tgcgggcatt ttagcttttt tccggcagct tgggaaatgc cgtctgaaaa cacttcagac
     3181 ggcattcttc taatagtgta atgcaatagt tactccaaga tttttgtata tggctgtttt
     3241 tatggtaaat taaattttca caaagaataa atatatttaa atcaataaaa taaaatttag
     3301 tcgaatccca ccgtttccgc cagaaaacaa aaccgccctg attcagggcg gttctttttg
     3361 gcgcgaatct gcacaattac cataaaagaa tcattggatt atgcttattt tccgtaacgc
     3421 cctgcaataa accgcaatcg gcagatgctt tgatcacagt tttatggtaa tttatatg
//
LOCUS       DAWITQ010000181         3438 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.181, whole genome shotgun sequence.
ACCESSION   DAWITQ010000181 DAWITQ010000000
VERSION     DAWITQ010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3438)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3438)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3438
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.181"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(214..1278)
                     /locus_tag="WIX18_001944"
     CDS             complement(214..1278)
                     /locus_tag="WIX18_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEZ5238995.1"
                     /translation="MEKEFRILNIVSAKIWGGGEQYVYDVSKALGLRGCTMFTAVNKN
                     NELMHRRFSEVSSVFTTRLHTLNGLFSLCALTRFIRKNRISHLMIHTGKIAALSILLK
                     KLTGVRLIFVKHNVVANKTDFYHRLIQKNTDRFICVSRLVYDVQTADNPFKEKYRIVH
                     NGIDTGRFPPSQEKPDSRFFTVAYAGRISPEKGLENLIEACVILHRKYPQIRLKLAGH
                     GHPDYMCRLKRDVSASGAEPFVSFEGFTEDIASFYRQSDVVVLPSLVPEAFGLSLCEA
                     MYCRTAVISNTLGAQKEIIEHHQSGILLDRLTPESLADEIERLVLNPEAKNALATAGH
                     QCVANRFTINHIADKLLDAI"
     gene            complement(1279..2037)
                     /locus_tag="WIX18_001945"
     CDS             complement(1279..2037)
                     /locus_tag="WIX18_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEZ5238996.1"
                     /translation="MKKVSVLIVARNEANHIRECIESCRFDKEVIVIDDHSTDNTAEI
                     AEGLGAKVFQRHLNGDFGAQKTFAIEQAGGEWVFLIDADERCTPELSDEISKIVQTGD
                     YAAYFVERRNLFPNHPATHGAMRPDSVCRLMPKKGSSVQGKVHETVQTPYPKRRLKHF
                     MYHYTYDNWEQYFNKFNKYTSISAEKYREQGKPVRFVRDIILRPIWGFFKIYILNKGF
                     LDGKMGWIMSVNHSYYTMIKYVKLYYLYKSGGKF"
     gene            complement(2112..2187)
                     /locus_tag="WIX18_001946"
     tRNA            complement(2112..2187)
                     /locus_tag="WIX18_001946"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2152..2154),aa:Ile,seq:cat)
     gene            complement(2241..3377)
                     /locus_tag="WIX18_001947"
                     /pseudo
     CDS             complement(2241..3377)
                     /locus_tag="WIX18_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247614.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
     gene            complement(3322..>3438)
                     /locus_tag="WIX18_001948"
     CDS             complement(3322..>3438)
                     /locus_tag="WIX18_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ5238997.1"
                     /translation="NHINGIENFWNQAKRVLRKYSGLARTFPRIGSATGCAD"
BASE COUNT          776 a          841 c          909 g          912 t
ORIGIN      
        1 tctactatac attgtaacaa agcacttgat gcggcagcac aagccgggga agacgctgca
       61 aaactttgcc aataggctgc gtaatatcgg gggatattgg gattttctta tttttaagga
      121 tggattcggg gtgtttcttt ccaatgaacg aatataattt ggcggtttgt tgcatcaaag
      181 gctttcagac ggcatatgcc gtctgaaagc ggcttatatt gcatccaata atttgtcggc
      241 gatatggttg atggtaaaac ggttggcgac gcattgatgc cctgccgttg ccagtgcgtt
      301 ttttgcttcg gggtttaaga cgaggcgttc gatttcatcc gccaaagatt caggtgtcag
      361 cctgtccagc agaatccccg attgatgatg ttcgataatt tccttttgcg cgcccaaagt
      421 attggaaatc actgccgttc ggcagtacat cgcctcgcat aatgacaaac cgaatgcctc
      481 cgggacgagg ctgggcaaaa ccacgacatc gctttggcgg taaaacgaag caatgtcttc
      541 ggtaaaccct tcaaaagaaa caaatggttc tgctcctgaa gcagatacgt cccgcttcag
      601 gcggcacata taatccggat gtccgtgccc tgccaatttg agtctgattt gaggatattt
      661 ccgatgcagt atcacacagg cttcaatcag gttttccaat cctttttccg gactgatcct
      721 gccggcgtag gcgacggtaa aaaaacggct gtcgggtttt tcttgagagg gagggaaacg
      781 gccggtatcg ataccgttat gaacaatccg gtatttttct ttaaagggat tgtcggcggt
      841 ttgcacatcg taaaccagac gggaaacgca aataaagcgg tctgtgtttt tctgtatcag
      901 gcggtgataa aaatcggttt tgttggcgac gacattgtgt ttgacaaata tcaggcgcac
      961 cccggtcagt tttttcaaaa gtatggataa ggcggcaatt ttgccggtgt gtatcatcag
     1021 gtgggaaatg cggtttttcc gaataaagcg ggtaagcgcg cagagcgaaa acagcccgtt
     1081 gagcgtgtga aggcgtgtcg tgaaaacgga agaaacttcg gaaaagcgtc tgtgcatcaa
     1141 ctcattattt ttattgacgg cggtaaacat cgtgcagccc cgcagtccca atgcttttga
     1201 aacatcatag acatattgtt cgcccccgcc ccaaatcttg gccgatacga tatttaatat
     1261 cctgaattct ttttccattt aaaattttcc gccggatttg tacagataat atagtttgac
     1321 atatttaatc attgtgtaat agctgtggtt gacggacata atccaaccca tttttccatc
     1381 gagaaaccct ttgttcagga tataaatttt gaaaaacccc caaattgggc ggaggataat
     1441 gtccctaacg aaacgcacgg gctttccctg ctctcggtat ttctcggctg aaatggaagt
     1501 atatttgttg aatttgttga aatattgttc ccagttgtcg tacgtataat ggtacataaa
     1561 atgtttcaga cggcgtttag ggtagggggt ctgtacggtt tcgtgtactt tgccttgcac
     1621 cgaactgcct ttcttcggca tcaaacggca tacgctgtcg ggacgcatcg cgccgtgtgt
     1681 ggcgggatgg ttggggaaaa ggttgcggcg ttcgacaaaa taggcggcat aatcgccggt
     1741 ttggacaatt tttgagattt catcagatag ttccggcgtg cagcgttcgt ctgcatcaat
     1801 caggaaaacc cattctccgc ctgcctgttc gatggcaaat gttttttgcg ctccgaaatc
     1861 cccgttcaaa tgccgttgga agacttttgc gcccaaaccc tcggcaattt cggcagtatt
     1921 gtcggtgctg tggtcatcga taacgataac ttctttatcg aaacggcaac tttcaataca
     1981 ttcccgaatg tggtttgctt catttctagc aacaatcaat acgctgactt ttttcattat
     2041 caaggtttct caaagcattt tggtttcaca gggcggcaaa aaagcccaaa catacgtccg
     2101 ggcttgggaa ttggtgggtc cggtggggtt cgaacccacg accaagggat tatgagtccc
     2161 ctgctctaac ccctgagcta cagacccgtc aagagtaggc gcgtattgta tagcatagcg
     2221 gtgggattga caaacttatt tcatccgatg attaagacgc agttgcttcc cccgaaggta
     2281 aacgatgagc tggcggcaat gcgtttttcg gtttcccagc ggctgccgct gccggtcagg
     2341 ttgatggcgg gaaggttcgg atcgttctgc ccgtcccaaa gctggggcgg aagttttcct
     2401 tcgggattgc tttgccggtc ggcaatgccc cacgcgaacg cggcttcgat tgcgcccgcc
     2461 gcacccagcg tgtgtccggt ttgcggcttg gtggacgtgc agggcgtatt gttgccgaaa
     2521 accgctgcaa cggcacggct ttccatactg tcgttgtggt gcgtcccggt gccgtgcaga
     2581 ttaatccagc cgatgtcttc gggcgcaaga cctgcgtgtt gcaatgccgt ctgaaaggca
     2641 aggattgcgc cttgcgcgtc ggggcggggc gtggaaatat ggtaggcatc gctgttggct
     2701 ccgtagccga cgagttcggc gtaaattatc gcaccgcgcc gtttggcgtg ttccaattct
     2761 tccagcacga aaatccccgc gccttcgccg atgaccagcc cgtcgcggtt cgcgtcgtat
     2821 gggcgcgggg ttttttccgg ttcgccgttg cggcggctgg cggcataaag cgagtcgaaa
     2881 acatacactt cggacgagaa aaattcttcg cctccgcccg ccagcatcat atcggtcaga
     2941 ccgtatttga tggcttcgta ggcataacct atgccttggc tgccggacga acacgcgctc
     3001 gatgtcggga tgatgcgtcc tttcagtccg aaaaagatgc cgatattggc ggcggcggtg
     3061 tgcggcatca tacgcacata ggtgttggca ctgaagttgc gcgacgtgcc ggtcagcaac
     3121 aattcgccca catcgccgat gtctttggtg ctgccgctgg aagagccgca ggcaacgccc
     3181 atccgtccgt cggtaatgct ttcgtctccg agcaaaccgg catccgtcaa agcctgctcc
     3241 gccgcatcga cgcacaaata cgacacacgc cccatacttc tgagctgctt gcgcgtccaa
     3301 tgtttcggcg gcgcgtaatc ctcaatcggc gcacccagtt gcgcttccaa ttcggggaaa
     3361 cgttcgtgcc aatccactat attttcgcaa gacgcgtttt gcctgattcc aaaagttctc
     3421 aatgccgtta atgtggtt
//
LOCUS       DAWITQ010000182         3429 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.182, whole genome shotgun sequence.
ACCESSION   DAWITQ010000182 DAWITQ010000000
VERSION     DAWITQ010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3429)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3429)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3429
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.182"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     regulatory      64..164
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            231..1454
                     /gene="cytX"
                     /locus_tag="WIX18_001949"
     CDS             231..1454
                     /gene="cytX"
                     /locus_tag="WIX18_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003519479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydroxymethylpyrimidine transporter
                     CytX"
                     /protein_id="HEZ5238998.1"
                     /translation="MSGNASSPSSSAAIGLIWFGAAVSIAEISTGTLLAPLGWQRGLA
                     ALLLGHAVGGALFFAAAYIGALTGRSSMESVRLSFGKRGSVLFSVANMLQLAGWTAVM
                     IYAGATVSSALGKVLWDGESFVWWALANGALIVLWLVFGARKTGGLKTVSMLLMLLAV
                     LWLSAEVFSTAGSTAAQVSDGMSFGTAVELSAVMPLSWLPLAADYTRHARRPFAATLT
                     ATLAYTLTGCWMYALGLAAALFTGETDVAKILLGAGLGAAGILAVVLSTVTTTFLDAY
                     SAGASANNISARFAETPVAVGVTLIGTVLAVMLPVTEYENFLLLIGSVFAPMAAVLIA
                     DFFVLKRREEIEGFDFAGLVLWLAGFILYRFLLSSGWESSIGLTAPVMSAVAIATVSV
                     RLFFKKTQSLQRNPS"
     gene            1451..2551
                     /locus_tag="WIX18_001950"
     CDS             1451..2551
                     /locus_tag="WIX18_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEZ5238999.1"
                     /translation="MTRIAILGGGLSGRLTALQLAEQGYQIALFDKGCRRGEHAAAYV
                     AAAMLAPAAEAVEATPEVVRLGRQSIPLWRGIRCRLKTPAMMQENGSLIVWHGQDKPL
                     SNEFVRHLKRGGVADDEIIRWRADDIAKREPQLGRRFSDGIYLPTEGQLDGRQILSAL
                     ADALDELNVPCHWEHECAPEDLQAQYDWLIDCRGYGAKTAWNQSPEHTSTLRGIRGEV
                     ARVYTPEITLNRPVRLLHPRYPLYIAPKENHVFVIGATQIESESQAPASVRSGLELLS
                     ALYAVHPAFGEADILEIATGLRPTLNHHNPEIRYNRARRLIEINGLFRHGFMISPAVT
                     AAAVRLAVALFDGKDAPERDEESGLAYIRRQD"
     gene            2572..3189
                     /gene="thiE"
                     /locus_tag="WIX18_001951"
     CDS             2572..3189
                     /gene="thiE"
                     /locus_tag="WIX18_001951"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEZ5239000.1"
                     /translation="MTFLPLKSPLKFYAVVPTADWVERMVEAGADTVQLRCKALHSDE
                     LKREIARCAAACQGSHTQLFINDHWREAIEAGAYGVHLGQEDMDTADLAAIAAAGLRL
                     GLSTHSVAELDRALSVHPSYIASGAIFPTTTKQMPTAPQGLDKLREYVKQAGGTPVVA
                     IGGIDLNNARAVLATGVSSLAAVRAVTEAANPEAVVKAFQALWDG"
BASE COUNT          704 a         1072 c          942 g          711 t
ORIGIN      
        1 atgcgccgtg ccgccgaaaa tgtaagaatt ttgccaacgc acgttgcttt gtgtaaactt
       61 aaagctttct tgtcggagtg ccgccgggcg gctgagattg cgaaagcaga atccgtagaa
      121 cctgtcgggg taatgcctgc gtaggaaaca aaccgtcaaa tgccttatca ggcttccgtt
      181 cccttttccg cacttccccg cccaccttcc ttctttttaa aggacgtcat atgtcgggca
      241 atgcctcctc tccttcatct tccgccgcca tcgggctgat ttggttcggc gcggcggtat
      301 cgattgccga aatcagcacg ggtacgctgc ttgcgccttt gggctggcaa cgcggtctgg
      361 cggctctgct tttgggtcat gccgtcggcg gcgcgctgtt ttttgcggcg gcgtatatcg
      421 gcgcactgac cggacgcagc tcgatggaaa gcgtgcgcct gtcgttcggc aaacgcggtt
      481 cagtgctgtt ttccgtggcg aatatgctgc aactggccgg ctggacggcg gtgatgattt
      541 acgccggcgc aacggtcagc tccgctttgg gcaaagtgtt gtgggacggc gaatcttttg
      601 tctggtgggc attggcaaac ggcgcgctga ttgtgctgtg gctggttttc ggcgcacgca
      661 aaacaggcgg gctgaaaacc gtttcgatgc tgctgatgct gttggcggtt ctgtggctga
      721 gtgccgaagt cttttccacg gcaggcagca ccgccgcaca ggtttcagac ggcatgagtt
      781 tcggaacggc agtcgagctg tccgccgtga tgccgctttc ctggctgccg cttgccgccg
      841 actacacgcg ccacgcgcgc cgcccgtttg cggcaaccct gacggcaacg ctcgcctaca
      901 cgctgaccgg ctgctggatg tatgccttgg gtttggcagc ggcgttgttc accggagaaa
      961 ccgacgtggc aaaaatcctg ctgggcgcag gtttgggtgc ggcaggcatt ttggcggtcg
     1021 tcctctccac cgttaccaca acgtttctcg atgcctattc cgccggcgcg agtgcaaaca
     1081 atatttccgc gcgttttgcg gaaacacccg tcgctgtcgg cgttaccctg atcggcacgg
     1141 tgcttgccgt catgctgccc gttaccgaat atgaaaactt cctactgctt atcggctcgg
     1201 tatttgcgcc gatggcggcg gttttgattg ccgacttttt cgtcttgaaa cggcgtgagg
     1261 agattgaagg ctttgacttt gccggactgg ttctgtggct ggcgggcttc atcctctacc
     1321 gcttcctgct ctcgtccggc tgggaaagca gcatcggtct gaccgccccc gtaatgtctg
     1381 ccgttgccat tgccaccgta tcggtacgcc ttttctttaa aaaaacccaa tctttacaaa
     1441 ggaacccgtc atgacccgta tcgccatcct cggcggcggc ctctcgggaa ggctgaccgc
     1501 actgcagctt gcagaacaag gttatcagat tgcacttttc gataaaggct gccgccgggg
     1561 cgaacacgcc gccgcctatg ttgccgccgc catgctcgcg cctgcggcgg aagcggtcga
     1621 agccacgcct gaagtggtca ggctgggcag gcagagcatc ccgctttggc gcggcatccg
     1681 atgccgtctg aaaacacctg ccatgatgca ggaaaacggc agcctgattg tgtggcacgg
     1741 acaggacaaa cctttatcca acgagttcgt ccgccatctc aaacgcggcg gcgtagcgga
     1801 tgacgaaatc atccgttggc gcgccgacga catcgccaaa cgcgaaccgc aactcggcag
     1861 acgtttttca gacggcatct acctgccgac cgaaggccag ctcgacgggc ggcaaatatt
     1921 gtctgcactt gccgacgctt tggacgaact gaacgtccct tgccattggg aacacgaatg
     1981 tgcccccgaa gacttgcaag cccaatacga ctggctgatc gactgccgcg gctacggcgc
     2041 aaaaaccgcg tggaaccaat cccccgagca caccagcacc ctgcgcggca tacgcggcga
     2101 agtggcgcgg gtttacacac ccgaaatcac gctcaaccgc cccgtgcgcc tgctacaccc
     2161 gcgctatccg ctctacatcg ccccgaaaga aaaccacgtc ttcgtcatcg gcgcgaccca
     2221 aatcgaaagc gaaagccaag cacctgccag cgtgcgttcc gggctggaac tcttgtccgc
     2281 actctatgcc gtccaccccg ccttcggcga agccgacatc ctcgaaatcg ccaccggcct
     2341 gcgccccacg ctcaatcacc acaaccccga aatccgttac aaccgcgccc gacgcctgat
     2401 tgaaatcaac ggccttttcc gccacggttt catgatctcc cccgccgtaa ccgccgccgc
     2461 cgtcagattg gcagtggcac tgtttgacgg aaaagacgcg cccgaacgcg atgaagaaag
     2521 cggtttggcg tatatccgaa gacaagatta aagccgtctg aaaggaaccc catgaccttc
     2581 ctgccactca aatccccgct caaattctac gccgtcgtcc ccaccgccga ttgggtcgag
     2641 cgcatggtcg aagcaggtgc cgacacggtg caactgcgct gcaaggccct gcacagcgat
     2701 gaattgaaac gcgaaatcgc ccgctgcgcc gcagcctgtc agggcagcca tacgcagctt
     2761 ttcatcaatg accactggcg cgaggcaatc gaagcaggcg cgtacggcgt gcatctcgga
     2821 caagaagaca tggacaccgc cgaccttgcc gccatcgccg ccgccggttt gcgcttgggt
     2881 ttgagtacgc actccgttgc cgaactcgac cgcgccctgt ccgtacaccc tagctacatc
     2941 gccagcggcg cgattttccc gaccacgacc aagcaaatgc ccaccgcccc gcaaggcttg
     3001 gacaaactgc gcgaatacgt caaacaggca ggcggcacgc ccgtcgtcgc cattggcggc
     3061 atcgatttga acaacgcccg agccgtactc gccaccggcg tttcctcact cgccgccgtc
     3121 cgcgccgtaa ccgaagcggc aaatcccgaa gcggtggtta aagcgtttca ggctttgtgg
     3181 gatggataaa accgaaagaa gaaaattcaa ttgccgtgtc ggcaaaactt agcccgttat
     3241 cgcaaacata cttaacttta aatgtggcat atcatcaaat tccgtcattc ccgcgtaagc
     3301 gggaatccgc cttaaaactt gagaaaccat catttgaaaa acagtttccg aatttcaaaa
     3361 atggattccc gcccgtgcgg gaatgacggc aaccggtcag ttgcgtatca aaaaataaag
     3421 taattcggc
//
LOCUS       DAWITQ010000183         3423 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.183, whole genome shotgun sequence.
ACCESSION   DAWITQ010000183 DAWITQ010000000
VERSION     DAWITQ010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3423)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3423)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3423
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.183"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            43..711
                     /locus_tag="WIX18_001952"
     CDS             43..711
                     /locus_tag="WIX18_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tfp pilus assembly protein FimT/FimU"
                     /protein_id="HEZ5239001.1"
                     /translation="MCTRKQQGFTLTELLIVMVIAAIMAMIALPNMSQWIASRRIASH
                     AERIANLLRFSRGEAVRLNLPVYICPVQVKKDGTVNNKCDSGKKGQGMLAFGDKNGNK
                     GYDNDTADVLLRSVVLNDDINDKRINYAFNHIAFGQTQPTTDRVVWTFNQNGTFGYTK
                     DQHLTKQSSFFYSDGYIQIVLTDARAVSDADKKFRSAVVLIDSSGRVEVCPRNDRRTV
                     CQYK"
     gene            741..1355
                     /gene="pilV"
                     /locus_tag="WIX18_001953"
     CDS             741..1355
                     /gene="pilV"
                     /locus_tag="WIX18_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus modification protein PilV"
                     /protein_id="HEZ5239002.1"
                     /translation="MKNNDCFRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVA
                     SVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKNYNLYMGNHHTLSAVDGDFAVDA
                     VKSKKDLAKAQLDRFGYELKNALQDAAAIYYAVCKDSSGAAPTLSAGSTFSSNCDNKA
                     NGDTLIKVLWVNDSAGDSDIARTNLETNGNNIVYTYQARVGGRE"
     gene            1352..2320
                     /locus_tag="WIX18_001954"
     CDS             1352..2320
                     /locus_tag="WIX18_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilW family protein"
                     /protein_id="HEZ5239003.1"
                     /translation="MRRKMLNVPKGSYDGMKGFTIIEFLVAGMLSMIVLMAVGSSYFT
                     SRKLNDAANERLAIQQDLRNAATLIVRDARMAGSFGCFNMSEHTEKDVVSDVPQKNRL
                     FSLKGSSANKLIPNGTDNKLIPITESLDINYQNFFQVGSALIFQYGIDDVNASAATTV
                     VSSCAAISKPGKQILTLENVKKELKISDQDKEQNGNIARQRHVVNAYAVGRIAGEEGL
                     FRFQLDDKGKWGNPQLLAKKIRYMKVRYIYVSDCPEDDDAGKEETFRYTDKFNSAQDA
                     VTPAGVEVLLSSGTDTKIAASSDNHIYAYRIDATIRGGNVCANRTL"
     gene            2299..2892
                     /locus_tag="WIX18_001955"
     CDS             2299..2892
                     /locus_tag="WIX18_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein"
                     /protein_id="HEZ5239004.1"
                     /translation="MRKQNTLTGIPTSDGQRGFALFIVLMVMIVVAFLVVTAAQSYNT
                     EQRISANESDRKLALSLAEAALREGELQVLDLEYDTDSKVTFSENCGKGLCTAVNVRT
                     NNDNEEAFDNIVVQGKPTVEAVKRFCPANFTDLCIDKKGMEYKKGKGSVSKPPRYIIE
                     YLGVKNGENVYRVTAKAWGKNANTVVVLQSYVSNNDE"
     gene            2897..3370
                     /locus_tag="WIX18_001956"
     CDS             2897..3370
                     /locus_tag="WIX18_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEZ5239005.1"
                     /translation="MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIERGYQSQLYTE
                     MVGINNISKQFILKSPLDDNQTIKSKLEIFVSGYKMNPKIAEKYNVSVHFVNKEKPRA
                     YSLVGVPKTGTGYTLSVWMNSVGDGYKCRDAASARAHLETLSSDVGCEAFSNRKK"
BASE COUNT          976 a          682 c          872 g          893 t
ORIGIN      
        1 aatttaatcc actatacatt accagttaac gttctattgc ttatgtgtac acgaaaacaa
       61 caaggtttca cgctaacaga gctgctcatc gtgatggtca ttgcagccat tatggcgatg
      121 atagccctcc ccaatatgag ccaatggatt gcatcccgcc gcattgccag tcacgcggag
      181 cggattgcca accttttgcg tttctccagg ggcgaagccg tccggctcaa tctccctgtc
      241 tatatctgtc ctgttcaagt taaaaaagac ggtacggtca acaataaatg tgactccggc
      301 aagaaggggc agggaatgtt ggctttcggc gacaaaaacg gcaataaggg atatgacaat
      361 gatacggcgg atgttctcct ccgcagtgtg gtattgaatg atgatatcaa tgataagcgg
      421 attaattatg ccttcaacca tatcgctttt ggtcagactc agccgaccac cgaccgtgta
      481 gtttggacat tcaatcaaaa cgggacgttc ggttatacga aagaccagca tcttacaaaa
      541 caatccagct ttttttattc cgacggttat atccaaatcg tgctgacaga tgcgagagca
      601 gtttcagatg ccgataagaa attccgttcg gcggtggttt tgattgacag cagcggcagg
      661 gttgaggttt gtcctagaaa cgataggcgt accgtatgcc aatataaatg attgttttag
      721 tcgatttggg aaataaaaaa atgaagaata atgattgctt ccgcctgaaa aacccccagt
      781 ccggtatggc gctgatagaa gtcttggtcg ctatgctcgt tctgaccatc ggtattttgg
      841 cactattgtc tgttcagttg cggacagtcg cttccgtcag ggaggcagag acgcaaacca
      901 tcgtcagtca aatcacgcaa aacctgatgg agggaatgtt gatgaatccg accattgatt
      961 cggacagcaa caagaaaaac tataatcttt acatgggaaa ccatcataca ctatcagctg
     1021 tggatggcga ttttgcggtt gatgccgtga aaagcaagaa ggatttggca aaagcccagt
     1081 tggacaggtt cggttatgaa ttgaaaaatg ccttgcagga tgcggcagcc atctattacg
     1141 ccgtctgcaa ggattcgtcg ggtgctgcgc cgacattgtc cgccggcagt actttttctt
     1201 caaattgcga caataaggca aacggggata ctttgattaa agtattgtgg gtaaatgatt
     1261 cggcagggga ttcggatatc gcccgtacga atcttgagac gaacggcaac aatatcgtat
     1321 atacctatca ggcaagggtc ggaggtcggg aatgagacgt aaaatgctaa acgtaccaaa
     1381 aggcagttat gatggtatga agggttttac cattattgaa tttttggttg cgggcatgct
     1441 cagtatgatt gtcctgatgg cggtcggatc gagttacttc acgtcccgga aattaaatga
     1501 tgcggcaaac gagcgtcttg ctattcaaca ggatttgcgg aatgcggcaa cattaattgt
     1561 ccgcgatgca agaatggcgg ggagcttcgg ttgtttcaat atgtctgagc ataccgaaaa
     1621 ggatgttgtt tccgatgtgc cgcaaaaaaa ccgtcttttt tccttaaaag ggagcagtgc
     1681 aaataaactt atccccaacg gtacagataa taaacttatc cccataacgg aatctttaga
     1741 tatcaattat cagaattttt tccaggttgg tagcgcattg atttttcaat acggaatcga
     1801 tgatgttaat gcaagcgccg cgactaccgt cgtcagcagc tgtgccgcaa tatcgaaacc
     1861 gggcaagcaa atccttactt tagaaaatgt aaaaaaagaa ttgaagattt cggatcagga
     1921 taaggagcaa aatggcaata tagcgcgtca aaggcatgtg gtcaatgcct atgcggtcgg
     1981 caggattgcc ggtgaggaag gtttgttccg cttccaattg gatgataagg gcaagtgggg
     2041 taatcctcag ttgctcgcga aaaagattag atatatgaaa gtgcggtata tctatgtttc
     2101 cgactgtcct gaagatgacg atgccggcaa agaggaaaca ttcagatata cggataaatt
     2161 caacagcgcc caagatgctg ttacgcccgc cggggtggag gttttattga gtagcggtac
     2221 tgataccaag attgccgctt cttcagacaa tcatatttat gcttaccgta tcgatgcgac
     2281 aatacgcggg ggaaatgtat gcgcaaacag aacactttga cgggaatccc gacttctgac
     2341 ggacagaggg ggtttgcact gtttatcgtg ctgatggtga tgatcgtcgt ggcttttttg
     2401 gttgtaactg ccgcgcagtc ttacaatacc gagcagcgga tcagtgccaa cgaatcagac
     2461 aggaaattgg ctttgtcttt ggccgaggcg gctttgcggg aaggcgaact tcaggttttg
     2521 gatttggaat atgatacgga cagtaaggtt acatttagcg aaaactgtgg aaaaggtctg
     2581 tgtaccgcag tgaatgtgcg gacaaataat gataatgaag aggcttttga caatatcgtg
     2641 gtgcaaggca agcccaccgt tgaggcggtg aagcgttttt gccctgcaaa ttttaccgac
     2701 ctgtgcattg acaagaaagg gatggaatat aagaaaggca agggaagcgt cagcaaacca
     2761 ccgcgctata ttatcgaata tttgggcgtg aagaacggag aaaatgttta tcgggttact
     2821 gccaaggctt ggggtaagaa tgccaatacc gtggtcgtcc ttcaatctta tgtaagcaat
     2881 aatgatgagt aataaaatgg aacaaaaagg gtttacattg attgagatga tgatagtcgt
     2941 cgcgatactc ggcatcatca gcgtcattgc cataccttct tatcagagtt atattgaaag
     3001 aggctatcag tcccagcttt atacggagat ggtcggtatc aacaatattt ccaaacagtt
     3061 tattttgaaa agtcccctgg acgataatca gaccatcaag agcaaactgg aaatatttgt
     3121 ctcaggctat aagatgaatc cgaaaattgc cgaaaaatat aatgtttcgg tgcattttgt
     3181 caataaggaa aaaccaaggg catacagctt ggtcggcgtt ccaaagacgg ggacgggtta
     3241 tactttgtcg gtatggatga acagcgtggg cgacggatac aaatgccgtg atgccgcttc
     3301 tgcccgagcc catttggaga ccttgtcctc agatgtcggc tgtgaagcct tctctaatcg
     3361 taaaaaatag ggctgttttg ccgatgccgt ctgaaaatca atgttcagac ggcattttta
     3421 tgg
//
LOCUS       DAWITQ010000184         3418 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.184, whole genome shotgun sequence.
ACCESSION   DAWITQ010000184 DAWITQ010000000
VERSION     DAWITQ010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3418)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3418)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3418
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.184"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(153..536)
                     /locus_tag="WIX18_001957"
     CDS             complement(153..536)
                     /locus_tag="WIX18_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239006.1"
                     /translation="MEKIKNYIEFKKLFKNITEKFVRDLDITLIEAAEYSIIEFEIYL
                     SEYPEDSTFIFTAWAIYLLENNCLNERGKDNFFIAEMKKCYQQTNLDRIKSIYSSSDY
                     HIFAKDVNKIQQTFKLNLANIMQQE"
     gene            complement(541..1048)
                     /locus_tag="WIX18_001958"
                     /pseudo
     CDS             complement(541..1048)
                     /locus_tag="WIX18_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675736.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="deaminase"
     gene            complement(1677..2072)
                     /locus_tag="WIX18_001959"
     CDS             complement(1677..2072)
                     /locus_tag="WIX18_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239007.1"
                     /translation="MNQFCLSEYEKAFLCRIIENNMIWKEYLIEQIENSIIVSRDNTG
                     CGCYIDFQVNLERTNLNKYENIPIFFEGDITAPDKSDAATFLLYTTESLNKAGRIIDF
                     LEVAIAGTNYDEVEVYSWLKMENSLRFGL"
     gene            complement(2084..2797)
                     /locus_tag="WIX18_001960"
                     /pseudo
     CDS             complement(2084..2797)
                     /locus_tag="WIX18_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236085.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
     gene            complement(2893..3165)
                     /locus_tag="WIX18_001961"
     CDS             complement(2893..3165)
                     /locus_tag="WIX18_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239008.1"
                     /translation="MNKRMKMCPACQQGYLYHSKPKYLHDEIILCDECDAVWLKGMNI
                     FYGEYEKDFYSYVPFMESQGITSECIWEGDLFDHPYYEDENSNDMD"
BASE COUNT         1002 a          688 c          551 g         1177 t
ORIGIN      
        1 gtaaatcatg gaacgcgtgc gtgctggagc acacacctta cgcatggatt ttaggtttca
       61 tgcaggctac agcttgctgc tgcggtataa aagtattttt agtgatttac tgtttttggt
      121 atttttgccc gacggggtta aaaatacagt tgctactctt gctgcatgat attggcaaga
      181 tttaatttaa atgtttgttg aatcttgttt acatccttag caaaaatatg atagtcactc
      241 gaagaataga tagattttat tctatccaaa ttagtttgtt gataacattt tttcatttcc
      301 gcgatgaaaa aattatcttt tcctctttca ttgagacagt tattttctaa cagatagatt
      361 gcccatgctg taaaaataaa tgtactatct tccggatatt cagataaata aatttcgaat
      421 tcaattatag aatattcagc tgcttcaatt aatgttatat ctaaatccct gacaaatttt
      481 tccgttatat ttttaaataa tttcttgaat tctatataat tttttatttt ttccatgatt
      541 ctattttcct gtaaaaatat ttaattgaat atttggatag cgatttctaa actctaaaat
      601 aacattgctg caagattgac aggcctttaa ttctgtaaat agatcaattc tacctgatac
      661 attacgatta tttccgagtt gctgtgctat agtttcaagt aatttatatt ctccatctat
      721 atttcttaat gttcctctag gaggagaggc aatattatga tatttatcaa cagatatagg
      781 tttaaaaatt tttgtttcag gtaacgaaat aaatccatgt tccccttttt ggaaagaact
      841 aaatgcttcc atcctttgcg gtaatccttt aacatcaatt tttgctatcg caagattccc
      901 tatttgtcga tactcttccg gcagtttcat gcggactctc tggctttcag cagttaaaag
      961 caggagcact gtcattgctc agataacggg taacaggtgt aggcttggcc gatattgcag
     1021 cctgtgcaga tacagatcct gcaaccatca atgtgccatt aacaacctga actgtaccat
     1081 gcagatattc tccattagag attgctttcg ctccctgtcc aatgttatat ccccctgctg
     1141 ccacagtagc tgctttgaca ctgaagccaa gcggtccgtt taataagtaa agtgcaggtt
     1201 gtgcggcaac agctgatttg taatcaaaag aatcataacg actcaatgtt tgataggctt
     1261 tcgataaagt gttattaata tctttggaag gaatagtgag attacccatt gactggggcg
     1321 ttttcagtat cgaagctgcc caagctgtgt tacctccaga ggcttggtta ataaaatatg
     1381 ttacctatgt atattgtttc ttcaaaaatc aaccgtattg tccttgggtg attttcgtac
     1441 cagcacaatc agtctgccct agttgacaga tcgcgccaca ctagccagat acagcgtatc
     1501 attggtaaaa ctgataatgc ggcaatataa agaaaaactt caatagtatg ttaacgaaat
     1561 ttgacgcata aaaatacgct aaaaaatttt cgcttgacta attaaaaatg ggattgagca
     1621 taaaatttta ataatttata ttattgaaaa tatctcagat tttcagtcag tttattttac
     1681 aagccgaacc gtaggctatt ttccatcttt aaccatgaat agacctcaac ttcatcataa
     1741 tttgtgcctg caatagcaac ttccagaaag tcaataattc tacctgcttt attcaaagac
     1801 tctgtagtat atagcaggaa agtcgctgca tctgacttat ccggtgcagt gatgtctcct
     1861 tcaaaaaaaa tagggatatt ttcgtattta tttagattag ttctttctaa atttacctga
     1921 aaatcaatgt agcacccaca tcctgtatta tctctagata ctattattga attttctatt
     1981 tgctctatta aatattcctt ccatatcata ttgttttcaa taattctaca taagaaagcc
     2041 ttctcatatt cagataaaca aaactggttc atatattcta cccttacatt ttcaaaatag
     2101 ttgcaatacg agatactcca ttgttgacat atacgcgaac aattaccgtt ataccattga
     2161 ccgttacagt aactggataa tttcctgttt ttgtcagttt taaagcatcc actgcctttt
     2221 gcgtcgctac aacagcattt tccatggagc ctgatttttg aatcaatgta ttaccgatgc
     2281 ttccttgatg ccccttaaag atgtgatgaa ctttatttag ccaatctaca ccgtatcttt
     2341 cagccaatag tcgagaatta ctttcaccta ttttttccat cgaagctaaa atcctttgag
     2401 cataggcagc atcagctgtt gaaaaatttg cttcgcccaa caaaagccgt aattcctgaa
     2461 tatctcctcg taaaattgca tttcttactc ccgcttctaa tgtggtttgt ggctgaaaga
     2521 gggaattatt ctctaccgcc acagtagccg cattcgccgc tgtattcaca tccccgccta
     2581 caacggcaga cgcagtgccg gcaaccagtt ttgaataggc agtaatcttc gctttagctt
     2641 tttcgatttc ggtcgcactc atacgactga aatcagtatt cttaaccaaa gcctcaccaa
     2701 caatctcacc gactgcagcg cctatcgcac catcctgaca cttaccctta ttcgccgccg
     2761 ctgccgcaca gcccgctatg gcatgggcaa tcttgtgggt ggtatatcgc tgccagccct
     2821 ctctgttgat aatcttgcgt atgattacgc cgtttgatgg ctaatcgtac ctacgcaggc
     2881 ttaaaatttc catcaatcca tatcatttga gttttcatct tcataatatg gatgatcaaa
     2941 caaatctcct tcccaaatac attcactcgt tataccttgg gattccatga aaggaacata
     3001 agaataaaaa tctttttcat attctccata aaatatattc atacctttga gccatactgc
     3061 atcgcattca tcacacagaa taatttcatc atgaagatat ttaggtttcg aatggtagag
     3121 atagccttgt tgacaagcag gacacatttt cattctctta ttcatgatta ctccatataa
     3181 tcgatttatt tttgtgggta agcagtagtg atttgattgc tgcctttagt ctgtacaaca
     3241 atacgtatat agcaacctga gacctttgca ataacatagg ttactaaaat tttatgctca
     3301 atctcatttt caaaatgcaa aacttttctg atttttccta ctttttgctc aatattagga
     3361 aggttttagg caattgaaaa ttttttggcg catttttatg cgtcaaattt cgttaaca
//
LOCUS       DAWITQ010000185         3341 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.185, whole genome shotgun sequence.
ACCESSION   DAWITQ010000185 DAWITQ010000000
VERSION     DAWITQ010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3341)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3341)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3341
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.185"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            61..690
                     /locus_tag="WIX18_001962"
     CDS             61..690
                     /locus_tag="WIX18_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biliverdin-producing heme oxygenase"
                     /protein_id="HEZ5239009.1"
                     /translation="MSETENQALTFAKRLKADTTAVHDSVDNLVMSVQPFVSKENYIK
                     FLKLQSVFHKAVDHIYKDAELNKAIPELEYMARYDAVTQDLADLGDKPYEYGKPLPHE
                     TGNKAIGWLYCAEGSNLGAAFLFKHAQKLDYNGEHGARHLAPHPDGRGKHWRAFVEHL
                     NALNLTPEAEAEAIQGAREAFAFYKVVLRETFGLAADAEAPEGMMPHRH"
     gene            865..3240
                     /gene="hmbR"
                     /locus_tag="WIX18_001963"
     CDS             865..3240
                     /gene="hmbR"
                     /locus_tag="WIX18_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent hemoglobin receptor HmbR"
                     /protein_id="HEZ5239010.1"
                     /translation="MKPLQMLPIAALVGSIFGNPVLAADEAATETTPVKAEIKAVRVK
                     GQRNAPAAVERVNLNRIKQEMIRDNKDLVRYSTDVGLSDSGRHQKGFAVRGVEGNRVG
                     VSIDGVNLPDSEENSLYARYGNFNSSRLSIDPELVRNIEIVKGADSFNTGSGALGGGV
                     NYQTLQGRDLLLDDRQFGVMMKNGYSTRNREWTNTLGFGVSNDRVDAALLYSQRRGHE
                     TESAGNRGYAVEGEGSGANIRGSARGIPDSSKHKYHSFLGKIAYQINDNHRIGASLNG
                     QQGHNYTVEESYNLTASSWREADDVNRRRNANLFYEWMPDSNWLSSLKADFDYQKTKV
                     AAVNNKGSFPMDYSTWTRNYNQKDLDEIYNRSMDTRFKRFTLRLDSHPLQLGGGRHRL
                     SFKTFVSRRDFENLNRDDYYFSGRVVRTTSSIQHPVKTTNYGFSLSDQIQWNDVFSSR
                     AGIRYDHTKMTPQELNAECHACDKTPPAANTYKGWSGFVGLAAQLNQAWHVGYDITSG
                     YRVPNASEVYFTYNHGSGNWLPNPNLKAERSTTHTLSLQGRSEKGMLDANLYQSNYRN
                     FLSEEQKLTTSGTPGCTEENAYYGICSDPYKEKLDWQMKNIDKARIRGIELTGRLNVD
                     KVASFVPEGWKLFGSLGYAKSKLSGDNSLLSTQPLKVIAGIDYESPSEKWGVFSRLTY
                     LGAKKAKDAQYTVYENKGWGTPLQKKVKDYPWLNKSAYVFDMYGFYKPAKNLTLRAGV
                     YNVFNRKYTTWDSLRGLYSYSTTNSVDRDGKGLDRYRAPSRNYAVSLEWKF"
BASE COUNT          909 a          859 c          832 g          741 t
ORIGIN      
        1 cgggcaagtg cggattttgc ccgcaccgca tccttatccc ttaccgacaa aggaaaaaat
       61 atgagtgaaa ccgaaaatca agcattgaca tttgccaaac gcttgaaggc ggataccacg
      121 gcggttcacg acagcgtgga taacctcgtt atgtctgtcc aaccgtttgt cagcaaagaa
      181 aactacatca aatttttgaa actccaatcc gttttccaca aggctgtcga ccacatctat
      241 aaagatgccg aattaaacaa agccattccc gagctggaat acatggcgcg atacgatgcc
      301 gtaacgcaag accttgcaga tttgggtgac aaaccttacg aatacggcaa accgctgccg
      361 catgaaaccg gcaacaaagc aatcggctgg ctttattgcg ccgaaggatc caatttgggc
      421 gcggcgtttt tgttcaaaca cgcccaaaaa ctcgattaca acggcgaaca cggcgcgcgc
      481 cacctcgctc cgcatcccga cgggcgcggc aaacactggc gtgccttcgt cgagcatctg
      541 aacgctttga acctgactcc cgaagccgaa gcggaagcca tccaaggcgc gcgcgaagcc
      601 tttgcattct acaaagtcgt gttgcgcgaa accttcggtt tggcagccga tgccgaagca
      661 ccggaaggaa tgatgccgca caggcactaa aaaataatcg aaccaaataa acaaggtctc
      721 ggcatagctg tttgcaggga cctttaatta cacggcgcgg ctttgtttac atggattact
      781 gtcttattaa atattaatga ttatcataaa atctattatt cgctaaccga tggatgaaca
      841 atccatacat cttgagttga taatatgaaa ccattacaaa tgctccctat cgccgcgctg
      901 gtcggcagta ttttcggcaa tccggtcttg gcagcagatg aagctgcaac tgaaaccaca
      961 cccgttaagg cagagataaa agcagtgcgc gttaaaggtc agcgcaatgc gcctgcggct
     1021 gtggaacgcg tcaaccttaa ccgtatcaaa caagaaatga tacgcgacaa taaagacttg
     1081 gtgcgctatt ccaccgatgt cggcttgagc gacagcggcc gccatcaaaa aggctttgct
     1141 gttcgcggcg tggaaggcaa ccgtgtcggc gtgagcatag acggtgtaaa cctgcctgat
     1201 tctgaagaaa actcgctgta cgcccgttat ggcaacttca acagctcgcg tttgtctatc
     1261 gaccccgaac tcgtgcgcaa catcgaaatc gtgaagggcg cagactcttt caataccggc
     1321 agtggtgcat tgggcggcgg tgtgaattac caaacgctgc aaggccgtga tttgctgttg
     1381 gacgacaggc aattcggcgt gatgatgaaa aacggttaca gcacgcgtaa ccgtgaatgg
     1441 acaaatactc tcggtttcgg tgtgagtaac gaccgcgtgg atgctgcttt gctgtattcg
     1501 caacgtcgcg gtcatgaaac cgaaagcgcg ggaaaccgag gctatgctgt ggaaggggaa
     1561 ggcagtggcg cgaatatccg tggttcggca cgcggtatcc ctgattcgtc caaacacaaa
     1621 taccacagct ttttgggtaa gattgcttac caaattaacg ataaccaccg catcggcgca
     1681 tcgcttaacg gccagcaggg acataattac acggttgaag agtcttataa cctgaccgct
     1741 tcttcctggc gcgaagccga tgacgtaaac agacggcgca atgccaacct cttttacgaa
     1801 tggatgcctg attcaaattg gttgtcgtct ttgaaggcgg acttcgatta tcagaaaacc
     1861 aaagtggcgg cggttaacaa caaaggctcg ttcccgatgg attattccac ctggacgcgc
     1921 aactataatc agaaggattt ggacgaaata tacaaccgca gcatggacac ccgattcaaa
     1981 cgttttactt tgcgtttgga cagccatccg ttgcaactcg ggggggggcg acaccgcctg
     2041 tcgtttaaaa ctttcgtcag ccgccgtgat tttgaaaacc taaaccgcga cgattattac
     2101 ttcagcggcc gtgttgttcg aaccaccagc agtatccagc atccggtgaa aaccaccaac
     2161 tacggtttct cactgtctga ccaaattcaa tggaacgacg tgttcagtag ccgcgcaggt
     2221 atccgttacg accacaccaa aatgacgcct caggaattga atgccgagtg tcatgcttgt
     2281 gacaaaacac cacctgcagc caacacttat aaaggctgga gcggttttgt cggcttggcg
     2341 gcgcaactga atcaggcttg gcatgtcggt tacgacatta cttccggcta ccgcgtcccc
     2401 aatgcgtccg aagtgtattt cacctacaac cacggttcgg gtaattggct gcctaatccc
     2461 aacctgaaag ccgagcgcag caccacccac accctgtctc tgcaaggccg cagcgaaaaa
     2521 ggcatgctgg atgccaacct gtatcaaagc aattaccgca atttcctgtc tgaagagcag
     2581 aagctgacca ccagcggcac tcccggctgt actgaggaaa atgcttacta cggtatatgc
     2641 agcgacccct acaaagaaaa actggattgg cagatgaaaa atatcgacaa ggccagaatc
     2701 cgcggtatcg agctgacagg ccgtctgaat gtggacaaag tagcgtcttt tgttcctgag
     2761 ggttggaaac tgttcggctc gctgggttat gcgaaaagca aactgtcggg cgacaacagc
     2821 ctgctgtcca cacagccgct gaaagtgatt gccggtatcg actatgaaag tccgagcgaa
     2881 aaatggggcg tattctcccg cctgacctat ctgggcgcga aaaaggccaa agatgcgcag
     2941 tacaccgttt atgaaaacaa gggctggggt acgcctttgc agaaaaaggt aaaagattac
     3001 ccgtggctga acaagtcggc ttatgtgttt gatatgtacg gcttctacaa accggctaaa
     3061 aacctgactt tgcgtgcagg cgtatataat gtgttcaacc gcaaatacac cacttgggat
     3121 tccctgcgcg gcctgtatag ctacagcacc accaactcgg tcgaccgcga tggcaaaggc
     3181 ttagaccgct accgcgcccc aagccgtaat tacgccgtat cgctggaatg gaagttttaa
     3241 tctggtatta ttgaattaat cgccttgttg aaaattaaag ccgtccgaat tgtgttcaag
     3301 aactcattcg gacggctttt taccgtaaat ctgtgtgatg g
//
LOCUS       DAWITQ010000186         3258 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.186, whole genome shotgun sequence.
ACCESSION   DAWITQ010000186 DAWITQ010000000
VERSION     DAWITQ010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3258)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3258)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3258
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.186"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            123..2150
                     /gene="uvrB"
                     /locus_tag="WIX18_001964"
     CDS             123..2150
                     /gene="uvrB"
                     /locus_tag="WIX18_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit B"
                     /protein_id="HEZ5239011.1"
                     /translation="MEVIRYPDSPFKLHQPFPPAGDQPTAIADLLEGLSDGLAYQTLL
                     GVTGSGKTYTMANVIAQSGRPAIIMAHNKTLAAQLYAEMREFFPENAVEYFVSYYDYY
                     QPEAYVPSRDLFIEKDSAINEHIEQMRLSATKNLMTRDDVIIVATVSAIYGIGDPTEY
                     QQMVLSVKEGDTIEQRDIIATLVSMQYERGDLDFKRGSFRVRGDVIDVYPAESSENAL
                     RISLFDDEIDRLDMFDPLSGSLHQRVGRYTVFPSSHYVTPRDTVLRACESIKEELRER
                     IDFFTKENRPVEQQRIEQRTRFDLEMLYEMGFCKGIENYSRHFSGKKEGEPPPTLMDY
                     LPDNAIMFIDESHVTVTQIGGMYKGDASRKQNLVDYGFRLPSARDNRPLKFHEFEKVM
                     PQTVFVSATPAKYEEEHAGQVVEQVVRPTGLVDPQIIIRPVATQVDDLMSEINDRIQK
                     GERVLVTTLTKRMAEQLTDYYSELGIKVRYLHSDIDTVERVEIIRDLRLGLFDVLVGI
                     NLLREGLDIPEVSLVAILDADKEGFLRSHRSLIQTIGRAARNVNGVAILYADKITDSM
                     KAAIDETERRREKQIKFNEEHGIVPQQIKKQVKDIIDGVYHEEDSGKGRRQGKNKVKV
                     GEIHNEEDTIKEIAKLEKAMQQAARDLQFEEAAVLRDRIRNIKESLLFGAE"
     gene            2186..3070
                     /locus_tag="WIX18_001965"
     CDS             2186..3070
                     /locus_tag="WIX18_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239012.1"
                     /translation="MTSIILELQSLAANPNSDVEELVSKTLMVARKLKINELTEWCNN
                     ELQGYSSKNLPKYRIFYGELKAFNPYRGDVPFMLPDELRERVTRVEYTSSISEIRNLL
                     KTKNNNFIRILSSKEKQFLMNLQDTPFPLEPKIIIYPINLMNIQSKVRQLILAWALRL
                     EEEGILGDGIQFTKSKQEKAMSNQFNIQNMQGFIGDIFGGNVQQNIQDGIHIEKENFN
                     KLANFLAKNGIPSAELEDLRNALIEDGQPTDKKFGSKVSAWIGNIITKASTGAIDVSV
                     GTIAGILTNAISKYYGLM"
BASE COUNT         1001 a          858 c          671 g          728 t
ORIGIN      
        1 tgggtagcga ttgggtttca gacggcatac attcaggatt tcaccgcctt atgccgtctg
       61 aaagacgttt ccgacccatc cctactacac gctttgtccg caaacgcatc acaggcaaga
      121 ttatggaagt cattcgatac cccgattccc ccttcaaact ccaccaaccc ttcccgcccg
      181 caggcgacca gcctaccgct attgccgact tgctcgaagg gctttcagac ggccttgcct
      241 accaaaccct gctcggcgta accggttcgg gcaaaaccta caccatggcg aacgtcatcg
      301 cccaaagcgg ccgacccgcc atcatcatgg cgcacaacaa aacccttgcc gcccagcttt
      361 atgccgaaat gcgcgagttt ttccctgaaa acgcggtgga atatttcgtc tcctactacg
      421 actattacca acccgaagcc tatgtgccaa gccgcgattt gttcatcgaa aaagacagtg
      481 cgatcaacga acacattgaa caaatgcgcc tttctgccac caaaaacctg atgacgcgcg
      541 atgacgtgat tatcgttgcc actgtgtccg ccatttacgg tatcggcgac ccgactgagt
      601 atcaacaaat ggtgttgtcc gtcaaagaag gcgacaccat cgagcagcgc gacatcatcg
      661 ccacgctcgt ttccatgcag tacgaacgcg gcgatttgga tttcaaacgc ggcagcttcc
      721 gcgtgcgcgg cgacgtgatt gacgtgtacc ccgccgaaag ctccgaaaac gccttgcgta
      781 tcagcctgtt tgacgacgaa atcgaccgcc tcgatatgtt tgacccgctt tcaggcagcc
      841 tgcaccaacg cgtcggccgc tacaccgtct tcccgtccag ccactacgtt accccgcgcg
      901 acaccgtatt gcgcgcctgc gagtccatca aagaagaatt gcgcgaacgc attgatttct
      961 ttaccaaaga aaaccgtccc gtcgagcaac aacgcatcga acagcgcacc cgtttcgacc
     1021 tcgaaatgct ctacgaaatg ggcttctgca aaggtatcga aaactactcc cgtcacttct
     1081 ccggcaaaaa agaaggcgaa ccgccgccca cgctgatgga ctacctgccc gacaacgcca
     1141 tcatgttcat cgacgaaagc cacgttaccg tcacacaaat cggcggcatg tacaaaggcg
     1201 acgcatcgcg caagcaaaac ctcgtcgatt acggcttccg cctaccttcc gcccgcgaca
     1261 accgcccgct caaattccac gaatttgaaa aagtcatgcc gcaaaccgtc ttcgtttccg
     1321 ccacccccgc caaatacgaa gaagaacacg ccggacaagt ggtcgaacaa gtcgtccgcc
     1381 ccacagggct ggtcgaccct caaatcatca tccgccccgt cgccacccaa gttgatgact
     1441 taatgagcga aatcaacgac cgcatccaaa aaggcgaacg cgtactcgtt accaccctta
     1501 ccaaacgcat ggcggagcaa ctcaccgact attacagcga actcggcatc aaagtgcgct
     1561 acctgcacag cgacatcgac accgtagagc gcgttgaaat tattagagat ttacggctcg
     1621 gattgtttga cgtactcgtc ggcatcaatc tcttgcgcga aggcctcgac atcccagaag
     1681 tctccctcgt cgccatcctc gacgcagaca aagaaggctt cctgcgctcc caccgcagcc
     1741 tgattcaaac cataggccgc gctgcgcgca acgtgaacgg cgtcgcgatt ctgtacgccg
     1801 acaaaatcac cgactctatg aaagccgcca tcgacgaaac cgaacgccgc cgtgaaaaac
     1861 aaattaaatt caacgaagaa cacggcatcg tgccgcaaca gattaaaaaa caggtcaaag
     1921 acatcattga cggcgtgtac cacgaagaag acagcggcaa aggccgtaga caaggcaaaa
     1981 acaaagttaa agtcggcgaa attcacaacg aagaagacac gattaaagaa atcgccaaac
     2041 tcgaaaaagc catgcaacag gcggctaggg atttgcagtt tgaagaagcg gctgttcttc
     2101 gtgataggat acggaatatt aaagagagtt tgttgtttgg ggcggaataa ttttattatt
     2161 tttatttaac atggagatta attaaatgac ttctattatt ttagaactcc aaagcctagc
     2221 tgccaatcca aatagtgatg tagaagagtt agtgagtaaa acattaatgg ttgcaagaaa
     2281 attaaaaatt aatgaattaa ctgaatggtg taataatgaa ttacaaggtt attcatcaaa
     2341 aaatttacca aaatatagaa tattttatgg agagttaaaa gcttttaacc cttatcgtgg
     2401 cgatgttcca tttatgcttc ccgatgaatt gagagaacga gtaacaagag ttgaatatac
     2461 ctcatcaatt agcgaaataa gaaacttact aaaaacaaaa aataataatt ttatacgaat
     2521 tctatctagt aaagaaaaac agtttttaat gaatttacaa gatactccat ttccacttga
     2581 acctaaaata attatttatc caattaactt aatgaatatt caatcaaaag taagacaact
     2641 aattttagct tgggcattac gactggaaga ggaaggtatt ttaggagacg gtatccaatt
     2701 tacaaaatca aaacaggaga aagcaatgtc aaaccaattc aatattcaga atatgcaagg
     2761 gtttattggg gatatttttg gcggtaatgt tcagcaaaat attcaagacg gtattcatat
     2821 tgaaaaagaa aatttcaata aactggctaa ctttttagca aaaaacggga ttccatctgc
     2881 cgaattagaa gatttacgaa atgcactgat agaagatggt cagcccacag ataaaaaatt
     2941 cggctcaaaa gtaagtgcat ggattggcaa tattattaca aaggcttcta ccggtgcaat
     3001 tgatgtttca gtaggtacta ttgcaggaat attaactaat gcgatttcaa aatattatgg
     3061 cttaatgtaa gcaaatgcaa tatgtgcggc tccaccacac acgccgtccc caaccgccca
     3121 aaaccgcgtg cctgcctgcg gcttaccccc taccacccaa ccaacacagc aagcgtaggt
     3181 tggatacttg tatccgacaa aacctttaac attcccatca ttgcaatcca ttgtagcaat
     3241 gcccaaaatg tcggattc
//
LOCUS       DAWITQ010000187         3247 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.187, whole genome shotgun sequence.
ACCESSION   DAWITQ010000187 DAWITQ010000000
VERSION     DAWITQ010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3247)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3247)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3247
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.187"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..>3247
                     /locus_tag="WIX18_001966"
     CDS             <1..>3247
                     /locus_tag="WIX18_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HEZ5239013.1"
                     /translation="YITGKEKGVLAAQAGKDINIIAGQISNQSEQGQTRLQAGRDINL
                     DTVQTGKHQATHFDADNHVIRGSTNEVGSSIQTKGDVTLLSGNNLNAKAAEVSSANGT
                     LAVSAKNDINISAGINTTHVDDASKHTGRSGGGNKLIITDKAQSHNETAQSSTFDGRQ
                     VVLQAGNDANILGSNVISDNGTRIQAGNHVRIGTTQTQSQSETYHQTQKSGLMSAGIG
                     FTIGSKTNTQENQSQSNEHTGSTVGSLKGDTTIVAGKHYEQIGSTVSSPEGNNIIHAQ
                     SIDIQAAHNKLNSNTTQTYEQKGLTVAFSSPVTDLAQQAIAVAQSSKQVGQSKNGRVN
                     AMAAANAGWQAYQTGKSAQNLANGTTNAKQVSISITYGEQQNRQTTQVQASQAQASQI
                     QAGGKTTLIATGAAEQSNINIAGSDIAGKAGTILIADNDITLQSAEQSNTERSQNKST
                     GWNAGAAVSFGQGGWSLGVTAGGNVGKGYGNGDSVTHRHSHIGDKGSQTLIQSGGDTT
                     IKGAQVRGKGVQVNAKNLSIQSVQDRETYQSKQQNASAQVTVGYGFSASGDYSQSKIR
                     ADHASVTEQSGIYAGEDGYQIKVGNHTDLKGGIITSSQSAEDKGKNRFQTATLTTSDI
                     QNYSQYQGKSFGLGASVAVSGKTLGQGAQNKPQNKHLTSVADKNGASSSVGYGSDSDS
                     QSSITKSGINTRNIHITDEAGQIRLTGKTAAQTKADIDTNVTTDTAERHSGSLKNTFN
                     KEAVQSELDLQREVTQEFDKTRQGVKQELYAVVDSKREQATKERLKNGGYDNDKSRAL
                     NKEANELDEKIRWLDAGLGLVWGAGSSDMAWSMFATTQADRAVRSATAPKEMWFHKKI
                     IDEKTGKVSFDTRQIWSLNDLSKEELASIQDTNGKVITVSNPGIFNNREDSLSNAAKQ
                     NRNSTNGSGVIAVMNPPTGKYKSDSNNKIKDSLWLSSSLVSELMYVGYDQLNNKVFQG
                     YLPKTNSEKLNQDIYREVQKMDNGWSVDTSNHSRGGITASVSLKDWVNNKEQNGIAPI
                     RKARFYGTATNVKNDYADVLQKNGYTYTGADGKTYNSGAYSIVHDKDFVGNK"
BASE COUNT         1173 a          759 c          718 g          597 t
ORIGIN      
        1 tatatcacag gcaaagaaaa aggtgtttta gcagcgcagg caggcaaaga catcaacatc
       61 attgccggtc aaatcagcaa tcaatcagag caagggcaaa cccggctgca agcagggcgc
      121 gacattaacc tagatacggt acaaaccggc aaacatcaag caacccattt tgatgccgat
      181 aaccatgtta ttcgcggttc aacgaacgaa gtcggcagca gcattcaaac aaaaggcgat
      241 gttaccctat tgtcagggaa taacctcaat gccaaagctg ccgaagtcag cagcgcaaac
      301 ggtacactcg ctgtgtctgc caaaaatgac atcaacatca gcgcaggcat caacacgacc
      361 catgttgatg atgcgtccaa acacacaggc agaagcggtg gtggcaataa attgattatt
      421 accgacaaag cccagagcca caacgaaacc gctcaaagca gcacctttga cggcaggcaa
      481 gttgtattgc aggcaggaaa cgatgccaac atccttggca gcaatgttat ttccgataat
      541 ggcacccgga ttcaagcagg caatcatgtt cgcattggta caacccaaac tcaaagccaa
      601 agcgaaacct atcatcaaac ccagaaatca ggattgatga gtgcaggtat cggcttcact
      661 attggcagca agacaaacac acaagaaaac caatcccaaa gcaacgaaca tacaggcagt
      721 accgtaggca gcttgaaagg cgataccacc attgttgcag gcaaacacta cgaacaaatc
      781 ggcagtaccg tttccagccc agaaggcaac aatatcatcc atgcccaaag catagacatt
      841 caagcggcac acaacaaatt aaacagtaat accacccaaa cctatgaaca aaaaggctta
      901 acggtggcat tcagttcgcc cgttaccgat ttggcacaac aagcgattgc cgtcgcacaa
      961 agcagcaaac aagtcggaca aagcaaaaat ggtcgtgtca atgccatggc agctgccaat
     1021 gcaggctggc aagcctatca aacaggtaag agtgcacaaa acttagccaa tggtacaacc
     1081 aatgccaaac aagtcagcat ctccataacc tacggcgaac agcaaaaccg acaaaccacc
     1141 caagttcaag caagccaagc ccaagcgagt caaattcaag caggcggtaa aaccacatta
     1201 atcgccacag gcgcagcaga acaatccaat atcaacatcg caggctcaga tattgccggc
     1261 aaagcaggca caatcctgat tgccgataac gacatcacac tccaatcagc cgagcaaagc
     1321 aataccgaac gcagccaaaa caaatcgaca ggttggaacg caggtgctgc cgtatcattc
     1381 ggacaaggag gctggtcatt aggcgttacc gcaggcggca atgtcggcaa aggctacggc
     1441 aatggcgata gcgtaaccca ccgccatagc catattggcg acaaaggcag ccaaaccctt
     1501 atccaaagcg gtggcgacac taccatcaaa ggcgcgcaag tacgcggcaa aggcgtacaa
     1561 gtcaatgcca aaaacctaag tattcaaagc gtacaagata gagaaactta tcaaagcaaa
     1621 caacaaaacg ccagtgcaca agtgaccgta ggttatggct tcagtgccag tggcgattac
     1681 agtcaaagca aaatccgagc cgaccatgct tcagtaaccg agcaaagcgg tatttatgcc
     1741 ggagaagacg gctatcaaat caaggtcgga aaccatacag acctcaaagg cggcatcatc
     1801 accagcagcc aaagcgcaga agacaagggt aaaaaccgct ttcagacggc cacccttact
     1861 accagcgaca ttcaaaatta cagccaatac caaggaaaaa gttttggatt gggtgccagc
     1921 gttgccgtaa gcggcaaaac actgggacag ggcgcacaaa ataaacctca aaacaaacac
     1981 ctgacaagcg tagccgataa aaacggcgca agttcatcag tgggttatgg cagcgacagc
     2041 gacagtcaaa gcagcatcac gaaaagcggc atcaacaccc gcaacataca catcaccgac
     2101 gaagcgggac aaatcaggct gacaggcaaa acagcggcac aaaccaaagc cgatattgat
     2161 acaaacgtaa ccacagacac cgccgaacga cattcgggca gcttgaagaa caccttcaac
     2221 aaagaagcgg tgcaaagtga actggattta caaagggaag taacccaaga gtttgataaa
     2281 actagacaag gagtgaaaca agaactttat gcagtagtag atagcaaacg agagcaagcc
     2341 acaaaagaga gactcaaaaa tggtggatat gacaatgata aatctagagc attaaataag
     2401 gaagctaatg aattagatga aaaaattcgt tggcttgatg cgggattagg actcgtttgg
     2461 ggagcaggga gttctgatat ggcttggagt atgtttgcca caacccaagc cgatagagcg
     2521 gtaaggtctg caactgcacc taaagaaatg tggttccata agaagataat agatgaaaaa
     2581 acaggtaaag tatcctttga taccagacaa atttggtcat tgaatgattt aagcaaggaa
     2641 gaactggcaa gcattcaaga cacaaatggc aaagttatta ctgtgtctaa tcctggtatt
     2701 ttcaataatc gagaagattc attaagcaat gcagcaaaac aaaatcgtaa tagtacaaac
     2761 ggtagtggtg ttattgcagt tatgaatcct ccaacaggga aatataaatc tgattctaat
     2821 aacaaaataa aagattcttt atggctcagt tcaagtcttg tttctgaact gatgtatgtc
     2881 ggttacgacc aattaaataa taaagtgttc caaggctatt tacccaaaac caattcagaa
     2941 aaactgaatc aagatattta tcgagaggtt caaaaaatgg ataatggctg gtctgttgat
     3001 accagtaacc acagtcgtgg gggaattaca gcaagcgttt ccctaaaaga ttgggtaaac
     3061 aataaagagc aaaatggcat tgccccaatc agaaaagcac gtttctatgg tacagccaca
     3121 aatgtgaaga atgattacgc cgatgtttta cagaaaaacg gctataccta tacgggtgca
     3181 gacggtaaaa cttataacag cggagcctac tcaatcgtgc atgataaaga ttttgtgggg
     3241 aacaaat
//
LOCUS       DAWITQ010000188         3200 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.188, whole genome shotgun sequence.
ACCESSION   DAWITQ010000188 DAWITQ010000000
VERSION     DAWITQ010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3200)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3200)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3200
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.188"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..372
                     /locus_tag="WIX18_001967"
     CDS             <1..372
                     /locus_tag="WIX18_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T cell/B cell stimulating protein TspB"
                     /protein_id="HEZ5239014.1"
                     /translation="TSPDSPAVPDRPNGRDGKDGGLLCKFFPDILACDRLPEPNPAED
                     LNLPSETVNVEFQKSGIFQDSAQCPAPVTFTVTVLDSSRQFAFSFENACTIAERLRYM
                     LLALAWAVAAFFCIRTVSREV"
     gene            675..959
                     /locus_tag="WIX18_001968"
     CDS             675..959
                     /locus_tag="WIX18_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2523 domain-containing protein"
                     /protein_id="HEZ5239015.1"
                     /translation="MKLLAALIPLLMSVVGRILTALGLMAVTYSGVDRLVAHFQQAIT
                     NSITGAPQAMLQLFYISGGGTVLNILFGAIAFILSFKQMTKLATSIGKKK"
     gene            960..2147
                     /locus_tag="WIX18_001969"
     CDS             960..2147
                     /locus_tag="WIX18_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2075 domain-containing protein"
                     /protein_id="HEZ5239016.1"
                     /translation="MAEICLITGTPGSGKTLKMVSMMANDEMFKPDENGIRRKVFTNI
                     KGLKIPHTYIETDAKKLPKSTDEQLSAHDMYEWIKKPENIGSIVIVDEAQDVWPARSA
                     GSKIPENVQWLNTHRHQGIDIFVLTQGPKLLDQNLRTLVRKHYHIASNKMGMRTLLEW
                     KICADDPVKMASSAFSSIYTLDKKVYDLYESAEVHTVNKVKRSKWFYTLPVIVLLIPV
                     FVGLSYKMLSSYGKKQEEPAAQESAATEQQAVLPDKTEGEPVNNGNLTADMFVPTLSE
                     KPESKPIYNGVRQVRTFEYIAGCVEGGRTGCTCYSHQGTALKEITKEMCKDYARNGLP
                     FNPYKEESQGRDVQQSEQHHSDRPQVATLGGKPWQNLMYDNWQEHGKPFEGIGGGVVG
                     SAN"
     gene            2362..>3200
                     /locus_tag="WIX18_001970"
     CDS             2362..>3200
                     /locus_tag="WIX18_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEZ5239017.1"
                     /translation="MNIIGLDISKDTIDATLHKTNGSIHYIKFKNNDDGLKQFRLWIK
                     GNRIRKAYIGMEATGIYYEKAADMLSSYYTVYVINPLKIKDYGKSRFNRTKTDKADSN
                     LIADYIKRHQDTLIPYQIPKNKALQKLINLKNQLQQHQKQIKNRLHSTEEDFIRNIHQ
                     DLIDTIQDKMEQVKIAISEQIKKQTDYNHYRNLQTIPSIGKDTASVLYAQLTEKHFKT
                     ANQFVSYAGLSPAIIQSGTSVRGRGRLSRYGNRRLKSTLYMPALCAYRFNAFPKLINN
                     LKKA"
BASE COUNT         1045 a          704 c          735 g          716 t
ORIGIN      
        1 acaagccccg attccccggc cgttccggac cgcccaaacg gcagggacgg caaagatggc
       61 gggcttttgt gcaaattctt ccccgacatt ctagcttgcg acaggctgcc cgagcccaat
      121 ccggcagaag atttaaatct gccgtctgaa accgtcaatg tagagtttca gaaatcagga
      181 atctttcaag attccgcaca gtgtcccgca cctgtcactt tcacagtgac tgtgcttgat
      241 tcaagcaggc agttcgcgtt cagctttgag aacgcatgta ccatagccga acggctaagg
      301 tacatgcttc tcgcccttgc ttgggcggtt gccgcctttt tttgtatccg cacagtatcc
      361 cgtgaagtct agcaggcgca gcaccgccgg gcttcagtaa cttgtgccaa ggcaggggga
      421 ggacgtccag aaagatttgt aaagacggct ttatcgtctt tataaatctt tttggatacc
      481 ccttgccgcc ccgccaaaag aacacactct gctgcaaggg caggtggtaa ggcgcgcgct
      541 ttttgcgccg tccccctgcc cccgcagcgt cgcaagtgag actgggggtg tgggggctag
      601 tccccgcaaa atctttcaga ttaagaaaca tttttttaat gaggcaaccg tgccttttaa
      661 gaaagggata gcaaatgaaa ttgttggccg cattgattcc gctcttgatg agcgtcgtag
      721 gccgtatatt gactgcatta ggcttgatgg cggtaaccta ttcaggggtg gatagattgg
      781 tagctcattt tcagcaggcg ataaccaata gcataacggg cgcgcctcaa gcgatgttgc
      841 agctttttta tataagcggc ggtggtactg ttctaaacat tcttttcggc gcgatcgcct
      901 ttattctgtc attcaaacaa atgacaaaac tagcaacctc aatcgggaag aaaaaataaa
      961 tggcagagat ctgtttgata accggcacgc ccggttcagg gaaaacatta aaaatggttt
     1021 ccatgatggc aaacgatgaa atgtttaagc cggatgaaaa cggcatacgc cgtaaagtat
     1081 ttacgaacat aaaaggcttg aaaataccgc acacctacat agaaacggac gcaaaaaagc
     1141 tgccgaaatc gacagatgag cagctatcgg cgcatgatat gtacgaatgg ataaagaagc
     1201 ccgaaaatat cgggtctatt gtcattgtag atgaagctca agacgtatgg ccggcacgct
     1261 cggcaggttc aaaaatccct gaaaatgtcc aatggctgaa tacgcacaga catcagggca
     1321 ttgatatatt tgttttgact caaggtccta agcttctaga tcaaaatctt agaacgcttg
     1381 tacggaaaca ttaccacatc gcttcaaaca agatgggtat gcgtacgctt ttagaatgga
     1441 aaatatgcgc ggacgatccc gtaaaaatgg catcaagcgc attctccagt atctatacac
     1501 tggataaaaa agtttatgac ttgtacgaat cagcggaagt tcataccgta aataaggtca
     1561 agcggtcaaa gtggttttac actctgccag taatagtatt gctgattccc gtgtttgtcg
     1621 gcctgtccta taaaatgttg agcagttacg gaaaaaaaca ggaagaaccc gcagcacaag
     1681 aatcggcggc aacagaacag caggcagtac ttccggataa aacagaaggc gagccggtaa
     1741 acaacggtaa ccttaccgca gatatgtttg ttccgacatt gtccgaaaaa cccgaaagca
     1801 agccgattta taacggtgta aggcaggtaa gaacctttga atatatagca ggctgtgtag
     1861 aaggcggaag aaccggatgc acatgctatt cgcatcaagg gacggcattg aaagaaatta
     1921 caaaggaaat gtgcaaggat tacgcaagaa acggattgcc gtttaaccca tataaagaag
     1981 aaagccaagg gcgggatgtc cagcaaagtg agcagcacca ttcggacaga ccgcaagttg
     2041 ccacgttggg cggaaagccg tggcaaaatc ttatgtatga taattggcag gagcacggaa
     2101 aaccgtttga aggaatcggc gggggcgtgg tcggatcggc aaactgaaga aaacggcaag
     2161 agagaaaaaa gacccgtaaa ccgtttgaat atagacggct tacgggtctt tgtttcgcgc
     2221 aaagcaaggg ctaaggcagt caggcagcaa atcccgcaat gtattaaaac agacgcgtag
     2281 aaatgccggc tgactttatc catcctcaaa attgaatatc atcctagccg tatcaaggct
     2341 gtataaataa ggaaaatacc aatgaatata atcgggctgg acatctcaaa ggataccata
     2401 gacgcaacat tgcataaaac aaacggaagt atccattaca ttaaatttaa gaataatgat
     2461 gatggattaa aacagtttag attgtggata aagggaaaca gaatcagaaa agcctatatc
     2521 ggcatggagg caacaggcat ctattacgaa aaggcagcag atatgctttc ttcctactat
     2581 accgtttacg ttatcaatcc cttaaaaatc aaggactacg ggaaaagcag gtttaaccgt
     2641 accaaaaccg acaaagcaga ttcaaacctg atagcagatt acataaaaag gcatcaagat
     2701 acattgatac cgtatcagat acccaaaaac aaagcactgc aaaaactgat taaccttaaa
     2761 aatcaattac agcaacatca gaagcaaatt aaaaaccgtc ttcatagcac tgaagaagac
     2821 ttcataagga acatacatca agacttgata gataccatac aggacaagat ggaacaggta
     2881 aaaatagcca tatccgaaca aatcaaaaaa caaacggact ataaccatta ccgcaatctt
     2941 caaaccatcc cgagcatagg caaagacacc gcatcagttc tttatgcgca actgacagaa
     3001 aaacatttta aaaccgcaaa ccagtttgta tcctatgccg gattaagtcc cgccatcata
     3061 caatcaggga caagcgtaag aggtcggggc agattgagcc gatacggaaa cagacgatta
     3121 aaaagtacgc tgtatatgcc cgccctttgt gcttaccgtt ttaacgcatt tccgaaatta
     3181 ataaataatc tgaaaaaagc
//
LOCUS       DAWITQ010000189         3192 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.189, whole genome shotgun sequence.
ACCESSION   DAWITQ010000189 DAWITQ010000000
VERSION     DAWITQ010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3192)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3192)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3192
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.189"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(63..2231)
                     /locus_tag="WIX18_001971"
     CDS             complement(63..2231)
                     /locus_tag="WIX18_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ5239018.1"
                     /translation="MNTPLFRLSLLSLTLAAGFAHAAENNAKAVLDTITVKGDRQGSK
                     IRTNIVTLQQKDESTATDMRELLKEEPSIDFGGGNGTSQFLTLRGMGQNSVDIKVDNA
                     YSDSQILYHQGRFIVDPALVKVVSVQKGAGSASAGIGATNGAIIAKTVDAQDLLKGLD
                     KNWGVRLNSGFASNEGVSYGASVFGKEGNFDGLFSYNRNDEKDYEAGKGFRNVNGGKT
                     VPYSALDKRSYLAKIGTTFGDGDHRIVLSHMKDQHRGIRTVREEFTVGSEDSRINIKR
                     QAPAYRETTQSNTNLAYTGKNLGFVEKLDANAYVLEKERYSADDSGTGYAGNVKGPNH
                     TRITTRGANFNFDSRLAEQTLLKYGINYRHQEIKPQAFLNSKFEISDKKKGADGKEVD
                     VDDAQKEKNRANEKIVHAYKLSNPTKTDTGAYIEAIHEIDGFTLTGGLRYDRFKVKTH
                     DGKTVSSSNLNPSFGVIWQPHEHWSFSASHNYASRSPRLYDALQTHGKRGIISIADGT
                     KAERARNTEIGFNYNNGTFAANGSYFWQTIKDALANPQNRHESTTAVREAVNAGYIKN
                     HGYELGASYRTGGLTAKVGVSHSKPRFYDTHKDKLLSANPEFGAQVGRTWTASLAYRF
                     QNPNLEIGWRGRYVQKAVGSILVAGQKDRNGKLENVVRKGFGVNDIFANWKPLGKDTL
                     NVNLSVNNVFNTFYYPHSQRWTNTLPGVGRDVRLGVNYKF"
BASE COUNT          727 a          736 c          893 g          836 t
ORIGIN      
        1 aaattatcag aacagatgcc gtctgaaagg ctttcagacg gcattttttc gggatgtgcg
       61 ttttagaact tgtagttcac gcccaagcgt acatcacgtc ccacgcccgg cagggtattg
      121 gtccagcgtt ggctgtgcgg atagtagaac gtgttgaaca cgttgttaac cgaaagatta
      181 acattgagcg tgtctttgcc cagcggtttc cagttggcga agatgtcgtt cacaccgaaa
      241 cctttgcgta caacgttttc caatttgccg ttgcggtctt tttgacctgc caccaatatc
      301 gaacccacgg ctttttgaac ataacggccg cgccagccga tttccagatt cgggttttgg
      361 aagcggtagg caagggaagc cgtccaagtg cggccgactt gtgcgccaaa ttcaggattc
      421 gcgctcaaca gcttgtcttt gtgcgtatcg taaaagcgcg gtttgctgtg gcttacgccg
      481 actttggcag tcaagccgcc ggtgcggtag gacgcgccca attcgtaacc gtggtttttg
      541 atgtaaccgg cattgacggc ttcacggacg gcggtggtag attcgtggcg gttttgcgga
      601 ttggcaagcg cgtctttgat ggtttgccag aagtagctgc cgttggcggc aaatgtgccg
      661 ttgttgtagt tgaagccgat ttcggtattg cgcgcgcgtt cggctttcgt gccgtcggca
      721 atcgaaatga tgccgcgctt gccgtgggtt tgcagcgcgt catacaggcg cgggctgcgg
      781 ctggcgtagt tgtggctcgc gctgaagctc cagtgttcgt gcggctgcca aatcacgccg
      841 aaactcgggt taaggttgct gcttgaaacg gttttgccgt cgtgggtttt caccttgaag
      901 cggtcgtaac gcagcccgcc ggtcagggta aagccgtcaa tctcgtgaat ggcttcgata
      961 tacgcgccgg tatcggtttt ggtcgggtta gacagtttgt aggcgtgaac aattttttca
     1021 ttggcacgat ttttttcttt ttgtgcatca tctacgtcga cttcttttcc gtcggctcct
     1081 tttttcttat cggagatctc aaatttcgag ttcaaaaacg cttgcggttt gatttcctga
     1141 tggcggtagt tgataccgta tttcagcagg gtttgttcgg caaggcggct gtcgaagttg
     1201 aagttcgcac cacgagtggt gattcgggta tggttggggc cttttacatt gcctgcgtag
     1261 ccggtgccgc tgtcatcggc ggaatagcgt tctttttcca acacataggc gttggcatcc
     1321 agtttttcga caaagcccag gtttttaccc gtgtacgcca aattggtgtt ggattgtgtg
     1381 gtttcgcggt aagcaggggc ttggcgttta atatttatcc gtgaatcttc gctgccgacg
     1441 gtaaattctt cacgcacagt gcggatgccc cggtgttggt ctttcatatg gctcaacacg
     1501 atgcggtggt cgccgtcgcc gaaggttgtt ccgattttgg cgaggtagct gcgtttgtcc
     1561 agcgcgctgt acggtacggt tttgccgccg ttgacattgc ggaaaccttt gccggcttcg
     1621 taatcttttt catcgttgcg gttgtaagag aacaagccgt cgaagttgcc ctcttttccg
     1681 aatacgctgg cgccgtagct tacgccttcg ttgctggcaa agccgctgtt gaggcgcacg
     1741 ccccagtttt tatccaagcc tttgagcagg tcttgggcat cgacggtttt ggcgataatc
     1801 gcgccgttgg tcgcgccgat accggcagag gcggaacccg cgcctttttg tacggaaacg
     1861 actttaacca aagcgggatc gacaataaat ctgccttggt ggtaaaggat ttggctgtcg
     1921 gaataggcgt tgtccacctt gatgtcgaca gagttctgac ccatgccgcg cagcgtcagg
     1981 aattgggacg tgccgttgcc gccgccgaaa tcgatggacg gctcttcttt taagagttcg
     2041 cgcatatcgg ttgcggtgct ttcgtctttt tgttgaagcg taacgatgtt ggtacggatt
     2101 ttgctgcctt ggcggtcgcc ttttacggta atggtatcca gtacggcctt ggcattattt
     2161 tctgccgcgt gggcaaaacc tgccgcaagt gtgagcgaga gcaggctgag acggaacaat
     2221 ggggtattca ttcaatcgtc ctcttgagtg tatgaaagga aggaaatcca aaccgttaag
     2281 atttggcagg ataagaaaaa taattaataa ttatttttat ttatattaac agggggggga
     2341 tttttgcaaa gctgattatt gtttttattt gcattgtgtt gttttttgtt gacagatttt
     2401 gtcggaaatg tatagtggac taacaaaaat caggataagg cgacgaagcc gcagacagta
     2461 cagatagtac ggcaaggcga ggcaacgctg tactggtttt tgttagtcca ctataaaaaa
     2521 cggcggaaat atagtggatt aacaaatgcg ggaatgacga aaagcaacct ttccgcgtcc
     2581 ttcccgcgaa agcgggaatc tagaacccct aacgcggcag gaatctatcg gaaaaaaccg
     2641 aaaccgaacg aacctagatt cccgcctgcg cgggaatgac gaaaagcaac ttttccgcgt
     2701 cattcccgcg aaagcgggaa tctagaaccc ctaacgtggc aggaatctat cggaaaaaac
     2761 cgaaaccgaa cgaacctaga ttcccgcctg cgcgggaatg acgaaaagca acctttccgc
     2821 gtccttcccg caaaagcggg aatctagaac ctctaacgtg gcaggaatct atcggaaatg
     2881 actgaaaccg aacagactgg attcccgcct gtgcgggaat gacgaagcct gcgtgggaat
     2941 gacgaaaagc aacctttccg tgtcattccc gcaaaagcgg gaatctagga actcaaagct
     3001 gcaagaattt atcagaaaca actggaactt aaaaaaacta gattcccgcc tgcgcgggaa
     3061 tgacgaaggg ttaaagaaat gacgagaaac ggcggtaatt tatcgggaat aaccgaaaac
     3121 gaacggaaat caggacaagg cgacgaagcc gcagacagta caaataggac ggaaccgatt
     3181 cacttggtgc tt
//
LOCUS       DAWITQ010000190         3189 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.190, whole genome shotgun sequence.
ACCESSION   DAWITQ010000190 DAWITQ010000000
VERSION     DAWITQ010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3189)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3189)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3189
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.190"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            67..1020
                     /locus_tag="WIX18_001972"
     CDS             67..1020
                     /locus_tag="WIX18_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HEZ5239019.1"
                     /translation="MTHTVHLHLEETDNLALQRLCGSFDNNLDLLAKALDIHISRRFE
                     HFTFNGAFAHAGKRALLKLLETAQTRDLNDGDIRLAAVEAQTEDAGHQEKNHDHAYYF
                     RTKRGSIGGRTPRQNGYIRALLNHDIVFGLGPAGTGKTYLAVAAAVDAMEKHQVERII
                     LVRPAVEAGEKLGFLPGDLTQKVDPYLRPLYDALYDLMGFDRVTKLIEKGLIEIAPLA
                     YMRGRTLNGAYIILDEAQNTTPEQMKMFLTRIGFGAKAVITGDTSQIDLPKNIKSGLK
                     DAREKLHNVEGLYFHTFTGEDVVRHPLVQKIVEAYESAEHD"
     gene            complement(1131..1454)
                     /locus_tag="WIX18_001973"
     CDS             complement(1131..1454)
                     /locus_tag="WIX18_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239020.1"
                     /translation="MKKCILGILTACAAMPAFADRIGDLEARLAQLEHRVAVLESGSN
                     TVKIDLFGSNSTMYVCSVTPFQKTFEASDRNEGVARQKVRQACNRETSAMFCEDEAIR
                     CRKFD"
     gene            complement(1627..2988)
                     /locus_tag="WIX18_001974"
     CDS             complement(1627..2988)
                     /locus_tag="WIX18_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HEZ5239021.1"
                     /translation="MLKKWLNKMLPSGRSSKKAESKTIIPAERHNIRAEMLSFAAENV
                     IRRLKGAGFQAYVVGGAVRDLLLGIEPKDFDVATDATPEQVHKLFRRSRIIGRRFQIV
                     HVMNGAEIIEVTTFRGGAKVHQNAHGRIMKDNTYGSIEEDAMRRDFTCNALYYDPEKE
                     EILDFHNGIADVAARRLVMIGDAAERYQEDPVRILRAIRLSSKLGFDLSEETAAPIAE
                     SICRLKHEPVARLFDEIMKLLFSGHARECLKRLNGFDIPDDIHPLLNALRVSDGIAGK
                     MTVLALKNTDERLRADKSVSVGFVLAALMWPELERHWKSNLQQGLKPVPALSDAINTM
                     RETVERGWGVPQRFSATMREIWMFQPQFENRKGARPHKLFAQARFRAAYDFLLLRAET
                     GNADRALAEWWTAFQTASTEQRSEMTKNEAAARHEKNEGQAKKRRRRRRKPKPKVVGT
                     DWE"
BASE COUNT          750 a          932 c          768 g          739 t
ORIGIN      
        1 gtactggttt aaatctaatc cactatagat taaaatcaca caatatccaa ctattcggac
       61 cttcatatga cacataccgt ccacctgcat ttagaagaaa ccgacaactt ggcgttgcag
      121 cgtctgtgcg gttcttttga caacaacctt gatttacttg ctaaagcact cgatatccac
      181 atcagccgcc gttttgaaca tttcactttc aacggcgcat ttgcacacgc cggcaaacgc
      241 gcactgctca aactcttgga aacggcgcag acgcgcgacc taaacgacgg cgacatcagg
      301 cttgccgccg tcgaagccca aaccgaagat gccggtcatc aagaaaaaaa ccatgaccac
      361 gcctattatt tccgcaccaa gcgcggcagc atcggcggca gaacgccacg gcagaacggc
      421 tatatccgcg ccctactcaa ccacgacatc gtattcggtc tcgggccggc aggtacgggc
      481 aaaacctatc tcgccgtcgc cgccgccgtc gatgcgatgg aaaaacacca agtcgaacgc
      541 atcattttag tgcggcctgc cgtcgaagcc ggcgagaaac tgggttttct gcccggtgac
      601 ctgacccaga aagtcgatcc ctaccttcgt ccgctttatg atgccctcta tgacctgatg
      661 ggctttgacc gtgtaaccaa gctgattgaa aaaggcctga ttgaaatcgc cccgctcgcc
      721 tatatgcgcg gcaggacgct caacggcgca tacatcatcc tcgacgaagc gcaaaacacc
      781 acgcccgaac aaatgaaaat gttcctgacc cgcatcggct tcggcgcgaa agccgtcatt
      841 accggcgaca ccagccaaat cgacctgccc aaaaacatca aatcgggatt aaaagatgcg
      901 cgtgagaaac tgcacaacgt ggaagggctg tatttccaca cctttaccgg cgaagacgtt
      961 gtccggcatc ctctggtgca aaaaatcgtc gaagcctacg aatcggcaga acacgactga
     1021 cattctaatg ccgtctgaaa cccgatgcat ggaaaatcgg gcagagaaaa acagatacgg
     1081 aagccaagct ccgtatccgt atccgtttct ttatccgtcc aaccgataca tcaatcgaat
     1141 tttctgcatc ggattgcctc atcttcgcaa aacattgccg aagtttcgcg gttgcacgcc
     1201 tgacgcactt tctgccgcgc cacgccttca ttccgatcgc ttgcctcaaa cgtcttctga
     1261 aaaggcgtaa cgctgcatac atacatggtg gaatttgaac cgaaaaggtc gattttgacg
     1321 gtattgctgc cgctttccaa tacggcgaca cggtgttcca actgcgccag acgtgcttcc
     1381 aaatcgccga ttctgtcggc aaatgcaggc atggcggcac acgcggtcaa aatgcccaaa
     1441 atacattttt tcatcaattt ttccttgttt cttgaaccct gcccacccgg acatcctttt
     1501 tccgagaggc agggttagac tttatttacg gggatgaatc cccttacaaa tcaggataat
     1561 acatagaacg gcactttatg cttcatccca tgtgttgaaa cttcattgct ccttgtctgt
     1621 tgacccttat tcccaatccg ttcccacaac cttcggcttg ggtttgcgcc tgcgacggcg
     1681 gcgttttttc gcctgtcctt cgtttttttc gtgtcgggcg gcggcttcgt ttttggtcat
     1741 ctccgaccgc tgttccgtcg atgccgtctg aaacgccgtc caccactcgg caagggcgcg
     1801 gtccgcattg ccggtttcgg cgcgcaagag caggaaatca taggcggcac ggaaacgcgc
     1861 ctgtgcaaac agtttgtgcg gacgtgcgcc tttgcgattt tcaaactgcg gctggaacat
     1921 ccaaatttcg cgcatcgtgg cggaaaagcg ttgcggcacg ccccaaccgc gttcgacggt
     1981 ttcgcgcatc gtattgattg catcggacag ggcgggcacg ggtttcaaac cctgttgcag
     2041 attgcttttc caatggcgtt ccaactcggg ccacatcagg gccgccagta cgaaaccgac
     2101 cgaaaccgat ttgtcggcac gcagccgctc atcggtattt ttcagggcaa gcaccgtcat
     2161 ttttccggcg atgccgtctg aaacgcgcaa ggcattgagc agcggatgga tgtcgtccgg
     2221 tatgtcaaat ccgttcaaac gtttcagaca ctcgcgcgcg tgccctgaaa acagcagttt
     2281 cataatttcg tcgaacagcc gcgctaccgg ttcgtgcttc agacggcata tcgattcggc
     2341 aatcggtgcg gcggtttctt ccgacagatc aaagcccaat ttgctcgaca ggcggatggc
     2401 gcgcaaaatc ctgacagggt cttcctgata gcgttcggcg gcatcaccaa tcataaccag
     2461 cctgcgggcg gcaacatcgg caatcccgtt gtggaaatcc aaaatctctt ctttttcagg
     2521 atcgtaatac aaggcattgc aggtaaaatc gcgccgcatc gcatcttctt cgatgctgcc
     2581 gtaggtgttg tccttcatga ttctgccgtg cgcgttctga tgaaccttcg caccgccgcg
     2641 aaacgtcgtt acttcgataa tctccgcacc gttcatcaca tggacaatct gaaaacgcct
     2701 gccgatgatg cggctgcggc ggaagagttt gtgcacctgt tcgggcgtgg catcggttgc
     2761 gacatcgaaa tccttgggtt cgatgccgag cagcaggtcc ctgaccgcgc cgccgaccac
     2821 ataagcctga aaccccgccc ctttcaggcg gcgtatgacg ttttcggcgg caaagctcaa
     2881 catttcggca cggatgttgt gtctttcggc aggaatgatt gttttacttt ccgctttttt
     2941 actgctccga ccggaaggca gcatcttatt caaccatttt ttcagcataa atattctaac
     3001 ccgaagagcg gcatctccac gggcaaccgt gttcagacgg catcaggcgg tacgattccg
     3061 caagatgccg taaccataaa caaaaggcgt agaaactacg ccgtccgaat cacgccgccc
     3121 tcgcggcggc ggcaacgcgc cattataaca gattgccctt taaaaaaatc agaccctgct
     3181 tttgtggcg
//
LOCUS       DAWITQ010000191         3102 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.191, whole genome shotgun sequence.
ACCESSION   DAWITQ010000191 DAWITQ010000000
VERSION     DAWITQ010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3102)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3102)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3102
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.191"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..212)
                     /locus_tag="WIX18_001975"
     CDS             complement(<1..212)
                     /locus_tag="WIX18_001975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239022.1"
                     /translation="MLPTRKTARKIQARHIALPFSGKPQFYRPQERLSKQAQATPPGH
                     FRFHRLSVVRIMQQHHQRITLFGRQQA"
     gene            272..895
                     /locus_tag="WIX18_001976"
     CDS             272..895
                     /locus_tag="WIX18_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEZ5239023.1"
                     /translation="MKKPTDTLPVNLQRRRLLCAAGALLLSPLAHAGAQREETLADDV
                     ASVMRSSVGSVNPPRLVFDNPKEGERWLSAMSARLARFVPEEEERRRLLVNIQYESSR
                     AGLDTQIVLGLIEVESAFRQYAISGVGARGLMQVMPFWKNYIGKPAHNLFDIRTNLRY
                     GCTILRHYRNLEKGNIVRALARFNGSLGSNKYPNAVLGAWRNRWQWR"
     gene            1006..2388
                     /locus_tag="WIX18_001977"
     CDS             1006..2388
                     /locus_tag="WIX18_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ5239024.1"
                     /translation="MARDNRIQMFPHEWRASTTLSGVYALRMLGMFLVLPVLAVYAAS
                     LPGAEGNKTLVGLAMGIYGLTQALLQLPLGIASDKFGRKKTIYVGLIVFAAGSFLAAA
                     ADTLPMLVAARAIQGAGAVSAAVTALLADLTRDGVRTRAMAMIGLSIGLTFSVSLVVA
                     PVIADAVGVRGLFLLTGILTVASIGVVAWMTPDPEVSKLHEDTQAQPSRIGEVLKNRR
                     LLTLDFGIFALHAAQMALFTALPFAMTQLGLEKIQHWKVYLPSIITGLVVMVPLIIVG
                     ETRNKLKQVFVLGIVCIAAAQLGLLSGMRSVGLITAYLVVYFIGFNVLEASLPSMVSK
                     IAPSDLKGTAMGVYNTMQSLGLFAGGAAGGLLFQKYGFSGVFAFCSILMLLWLVIAVL
                     SPAPKPVKNLSYPVGGVWQGNRDGLQRALSELEGVEDIGFSFDGQTVYLKVLQKGFDQ
                     AAAEKIITGV"
     gene            2392..2916
                     /locus_tag="WIX18_001978"
     CDS             2392..2916
                     /locus_tag="WIX18_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEZ5239025.1"
                     /translation="MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQ
                     RVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRIQSRKYQGKDGIERTAYDIVANE
                     MKMLGGRNENSGGAPYEEGYGQSQEAYQRPAQQSRQPASDAPSHPQEAPAAPRRQPVP
                     AAAPVEDIDDDIPF"
BASE COUNT          618 a          838 c          945 g          701 t
ORIGIN      
        1 gcctgctgcc gcccgaaaag cgtgatgcgc tgatggtgct gctgcataat ccggacgacg
       61 gataaccggt gaaaacggaa atgcccgggc ggtgttgcct gtgcctgttt ggacaagcgt
      121 tcttgagggc ggtagaattg aggtttgccc gaaaagggca gggcgatatg ccgcgcttgg
      181 attttgcgcg cggtttttcg cgttggaagc aatcattgtc tgtttgaata tttaatgccg
      241 tctgaaacgt ccggacgcgc ccccgttccc tatgaaaaaa ccgaccgata ccctacccgt
      301 taatctgcaa cgccgccgcc tgttgtgtgc cgccggtgcg ttgttgctca gtcctctggc
      361 gcacgccggc gcgcaacgtg aggaaacgct tgccgacgat gtggcttccg tgatgaggag
      421 ttctgtcggc agcgtcaatc cgccgaggct ggtgtttgac aatccgaaag agggcgaacg
      481 ttggttgtct gccatgtcgg cacgtttggc aaggttcgtc cccgaggagg aggagcggcg
      541 caggctgctg gtcaatatcc agtacgaaag cagccgggcc ggtttggata cgcagattgt
      601 gttggggctg attgaggtgg aaagcgcgtt ccgccagtat gcaatcagcg gtgtcggcgc
      661 gcgcggcctg atgcaggtta tgccgttttg gaaaaactac atcggcaaac cggcgcacaa
      721 cctgttcgac atccgcacca acctgcgtta cggctgtacc atcctgcgcc attaccggaa
      781 tcttgaaaaa ggcaacatcg tccgcgcgct tgcccgcttt aacggcagct tgggcagcaa
      841 taaatatccg aacgccgttt tgggcgcgtg gcgcaaccgc tggcagtggc gttgattttg
      901 aacccgcgcc gcaaccgaaa tacggcgaat cctgtataat ccgaaaatct gttcactgga
      961 agttcagacg gcattgcaac tgttgatgcc gtctgaaaaa atatgatggc aagagacaac
     1021 cgcatccaaa tgtttccgca cgaatggcgc gccagtacga cgctttccgg cgtgtacgcg
     1081 ctgcgtatgc tgggtatgtt cctcgtgctg cccgtattgg cggtgtatgc cgcctcgctg
     1141 cccggcgcgg aaggcaacaa aacgctggtc gggctggcaa tgggcattta cgggctgaca
     1201 caggctctgc tgcaactgcc tttgggcatc gcttccgaca agttcgggcg caagaaaacc
     1261 atttatgtcg ggctgattgt gtttgcagcg ggcagcttcc ttgccgccgc cgccgatacg
     1321 ctgcccatgc tggtcgccgc acgcgccata cagggtgcgg gagcggtcag tgcggcggtt
     1381 accgcgctgc tggcggattt gacgcgcgac ggagtacgta cccgcgcgat ggcgatgatc
     1441 ggtttgagta tcggtctgac gttttcggtc agcctcgtcg ttgcccctgt gattgccgac
     1501 gcggtgggcg tacgcggctt gtttctgctg accggtattt tgaccgttgc cagtatcggc
     1561 gtggtggcgt ggatgactcc cgacccggag gtttccaagc tgcacgaaga tacgcaggcg
     1621 cagccttcgc gcataggcga agttttgaaa aaccgtaggc tgctgacgct cgatttcggc
     1681 attttcgccc tgcacgccgc gcaaatggca ttgtttaccg cgctgccttt tgcgatgacg
     1741 cagctcggtt tggaaaaaat ccagcattgg aaagtctatc tgccctcgat cattacgggc
     1801 ttggtggtga tggttccgct gattatcgtc ggcgagacgc gcaacaagct caaacaggtt
     1861 tttgttttgg gtatcgtctg tattgcggcg gcgcagctcg gtttgctgtc cggtatgcgc
     1921 tcggtaggct tgattaccgc ttatttggtt gtttacttta tcggttttaa tgtgttggaa
     1981 gcgagcctgc cgtctatggt ttccaaaatc gcgccgtccg acctgaaggg tacggcgatg
     2041 ggtgtgtaca acacgatgca gtcgctcgga ctgtttgccg gcggcgcggc aggcggcttg
     2101 ctgtttcaaa aatacggctt ttccggcgtg tttgcctttt gcagcatatt gatgctgctg
     2161 tggctggtaa ttgccgtttt atcgcctgcg cccaagcccg tcaaaaacct cagttaccct
     2221 gtcggcggcg tgtggcaggg caatcgggac ggtttgcaac gcgccttgtc ggagcttgag
     2281 ggcgtggaag acatcggttt cagtttcgac gggcagaccg tctatcttaa agtgttgcag
     2341 aagggtttcg atcaggctgc cgctgaaaaa atcatcacag gagtttaaaa aatgtcattg
     2401 aacaaagtca tcctcatcgg ccgcctcgga cgcgatcccg aagtgcgcta tatgcccaac
     2461 ggcgaggcgg tgtgtaattt cagcgtcgcc accagcgaaa cttggaacga ccgcaacggc
     2521 caacgtgtag agcgtactga gtggcacaac atcacgatgt accgcaaact ggcggaaatt
     2581 gccgggcaat acctcaaaaa aggcgggctg gtttatctgg aaggcagaat ccaaagccgc
     2641 aaataccaag gcaaagacgg catcgaacgc accgcttacg atattgtcgc caacgaaatg
     2701 aaaatgttgg gcgggcgcaa tgaaaacagc ggcggtgcgc cttacgagga aggttacggt
     2761 cagagtcagg aggcttacca acgccccgcg cagcaaagcc ggcagcccgc ctccgacgcg
     2821 ccgtcccatc cccaagaagc accagccgcg ccgcgccgcc aacccgtgcc tgccgccgcc
     2881 ccggtcgagg acattgacga cgatatcccg ttctgaattt tacggccgga catcctcgcg
     2941 gagggaaatc ataaaggacg gagaaacctt aaaccttacg gggcagggtt tctctttttt
     3001 gcatttgggc cggcttgttg ccgccctttg cgttgggcgg aacgttgcga ttgcgccgtt
     3061 cgggcgtttt gaggcagtga tgcctgccgc acgtccccgc tg
//
LOCUS       DAWITQ010000192         3060 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.192, whole genome shotgun sequence.
ACCESSION   DAWITQ010000192 DAWITQ010000000
VERSION     DAWITQ010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3060)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3060)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3060
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.192"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(12..173)
                     /locus_tag="WIX18_001979"
     CDS             complement(12..173)
                     /locus_tag="WIX18_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239026.1"
                     /translation="MAYFGGFVRALFDLGVFERGGVKGREKWFSRVWWRSEVLCLMCG
                     GIFSVKLIL"
     gene            242..2467
                     /locus_tag="WIX18_001980"
     CDS             242..2467
                     /locus_tag="WIX18_001980"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HEZ5239027.1"
                     /translation="MTQKSTIVYTHTDEAPALATQSLLPIVQAFARHADIDVKTADIS
                     LSGRILAAFPEHLTEAQRVPDALAELGELVKQPDANVIKLPNISASVPQLTAAIKELQ
                     SKGFAVPDYPADPQTDEEKAVRERYDRIKGSAVNPVLREGNSDRRAPKAVKNFAKKNP
                     HSMGAWAKDSKTHVATMQSGDFFHNEQSVTVPEATSVSIVFTDKQGNKKELRAPVALK
                     AGEIIDATVMSKKALLAFLAEQVKDAKAKGVLFSLHMKATMMKVSDPIIFGHAVKVFF
                     APVFEKFGGKLAAAGVNVNNGFGNLLANLDKLDADTRAAVEAEIAAVYAANPDLAMVD
                     SDKGITNLHVPSDVIVDASMPAMIRNSGRMWDKNGKAQDTKAVIPDSSYAGVYQATID
                     FCREHGAFDPTTMGTVPNVGLMAQAAEEYGSHNKTFEIEADGQVQVVDAAGKVLMQHD
                     VEAGDIWRMCQTKDAPVKDWVQLAVNRARLSNTPAVFWLDENRPHDKSLLAKVKAYLA
                     ELDTNGLDIRVLAPEEAAKFSLGRLKNGEDTISVTGNVLRDYLTDLFPILELGTSAKM
                     LSIVPLMNGGGMFETGAGGSAPKHVQQFLEENHLRWDSLGEFLALAVSFEHLAQKTGN
                     TKAQVLADTLDAATEKLLLNDKSPKRKTGELDNRGSHFYLTLYWAQELAAQDKDAELK
                     AAFAPLAKSLAENEAKIVEELSAVQGKAVDIGGYYAANPEKAAQAMRPSATFNQALST
                     L"
     gene            2610..2918
                     /locus_tag="WIX18_001981"
     CDS             2610..2918
                     /locus_tag="WIX18_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239028.1"
                     /translation="MKTVPTILISILLATALPASAHGIHKSKPLTMDELPPICQQYFK
                     RAETCYNKAGNKANFARNNTKFLFQALPAADLGQRKQMCQIAMDSFAEKTRISNSNAV
                     "
     gene            2908..3060
                     /locus_tag="WIX18_001982"
     CDS             2908..3060
                     /locus_tag="WIX18_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239029.1"
                     /translation="MPSETMISDGILTSKRTSLIKPAFPASLTRTGLNEVTALTIMAS
                     SHSQKL"
BASE COUNT          870 a          919 c          681 g          590 t
ORIGIN      
        1 aatttaaacc actataaaat caatttcacc gaaaatatgc cgccgcacat caggcacagc
       61 acctccgacc gccaccaaac gcgggaaaac catttctccc ttcctttcac gccgccgcgt
      121 tcaaacacgc caagatcgaa caaagcgcga acaaagccgc caaaatatgc cataatagcc
      181 gcgcacattc cccgcgcaat gtgttccaaa agaaaaaacc aacctacaag agaataatcc
      241 tatgactcaa aaatccacca ttgtttatac ccataccgac gaagcccccg cgctggcgac
      301 ccaatcgctg ctgccgattg tgcaggcgtt tgcccgccac gccgatattg atgtcaaaac
      361 tgccgacatt tccctgtccg gccgcatttt ggcggcattt cctgaacatc tgaccgaagc
      421 gcagcgcgta cctgatgcgc ttgccgaatt gggcgaactg gtgaaacaac cagatgcaaa
      481 cgtaatcaaa ctgccgaaca tcagcgcgtc cgtaccgcaa ctgactgccg cgattaaaga
      541 attgcagtct aaaggctttg ccgttcccga ctatcccgcc gacccgcaaa ccgacgaaga
      601 aaaagccgta cgcgaacgct acgatcgcat caaaggcagc gcggtcaatc ccgttttgcg
      661 cgaaggcaac tccgaccgcc gcgcccctaa ggcagtgaaa aactttgcca aaaaaaatcc
      721 gcacagtatg ggcgcgtggg cgaaagactc caaaacccac gttgccacca tgcaaagcgg
      781 cgactttttc cataacgaac aatccgttac cgtacccgaa gcgacttccg tatccatcgt
      841 gttcaccgac aaacaaggca acaaaaaaga gctgcgcgcg cctgttgccc tgaaagccgg
      901 cgaaatcatc gacgcaaccg tgatgagcaa aaaagccctg ctcgccttcc ttgccgaaca
      961 agtgaaagac gcgaaggcaa aaggcgtatt gttctcactg catatgaaag ccacgatgat
     1021 gaaagtgtcc gacccgatta tcttcggaca cgccgtcaaa gtgttcttcg cgcctgtatt
     1081 tgaaaaattc ggcggcaaac tggctgccgc aggtgtcaac gtcaacaacg gtttcggcaa
     1141 cctgcttgcc aatctggaca aactggatgc ggacacccgc gccgccgtcg aagctgaaat
     1201 cgccgccgtt tacgccgcca accctgattt ggcgatggtt gattccgaca aaggcatcac
     1261 caacctgcac gttcccagcg atgtcatcgt cgacgcttct atgcctgcga tgattcgtaa
     1321 ttccggccgt atgtgggaca aaaacggcaa agcacaagac accaaagccg tgattcccga
     1381 cagcagctat gccggcgttt accaagcaac catcgacttc tgccgcgaac acggcgcatt
     1441 tgacccgaca accatgggta ctgtgcccaa cgtcggactg atggcgcaag cggcggaaga
     1501 atacggctcg cacaacaaaa cctttgaaat cgaagccgac ggtcaggttc aagtagttga
     1561 tgcggcagga aaagtcctga tgcagcacga cgttgaagca ggcgacatct ggcgtatgtg
     1621 ccaaaccaaa gacgctccgg ttaaagactg ggtacaactc gccgtcaacc gcgcccgcct
     1681 gagcaatacg cccgccgtgt tctggctcga cgaaaaccgt ccgcatgaca agagcctgct
     1741 cgccaaggtt aaagcctacc ttgccgaact ggataccaac ggcctcgaca tccgcgtcct
     1801 cgctcccgaa gaagccgcca agttcagcct gggccgtctg aaaaacggcg aagacaccat
     1861 ctccgtaacc ggtaatgtct tgcgcgacta cctgaccgac ttgttcccga ttttggaact
     1921 cggcacaagc gcgaaaatgc tgtctatcgt tccattgatg aacggcggcg gtatgtttga
     1981 aaccggcgcg ggcggttctg caccgaaaca cgtccaacaa ttccttgaag aaaaccactt
     2041 gcgttgggac tctttgggcg aattcctcgc gctcgccgta tcgtttgaac atttggcaca
     2101 aaaaaccggc aacaccaaag cccaagtcct cgccgacact ttggatgccg ccaccgaaaa
     2161 actgctgcta aacgacaaat cgcccaaacg caaaaccggc gaactcgaca accgcggcag
     2221 ccatttctac ctcaccctct actgggcgca agaattggcg gcgcaagaca aagatgccga
     2281 attgaaagcc gcatttgcgc cgttagccaa atcgttggcg gaaaacgaag ccaaaatcgt
     2341 tgaagaactc tctgccgtac aaggcaaagc ggtcgacatc ggcggctact acgccgccaa
     2401 tcctgaaaaa gcggcacaag cgatgcgccc aagcgcaacc tttaatcagg cactaagcac
     2461 cttataagca caaaggtaaa aatgccgtct gaacattcgt cgttcagacg gcattagtta
     2521 ttcctatctg cctgattatg attaaacgcc gcacccattg gatataaatc atataatctt
     2581 tagtttttac cctaggaaaa gacaataata tgaaaactgt tccaaccatc ctgattagca
     2641 tccttttggc aaccgccctt cctgcatccg cacacggtat acataagagc aagcccctga
     2701 ctatggacga gctgccgccg atttgccaac aatatttcaa acgcgccgaa acctgttaca
     2761 acaaagccgg caacaaggca aattttgcac gcaacaacac taaattccta ttccaagccc
     2821 tgcctgctgc cgatttggga cagcgtaagc aaatgtgcca aatcgctatg gattcgtttg
     2881 cagaaaaaac ccgcatcagc aatagcaatg ccgtctgaaa caatgatttc agacggcatt
     2941 ctcacatcaa aacgcactag cttgataaaa cccgccttcc ccgcatccct gacccgaaca
     3001 ggattaaacg aagtaacggc tttaaccatt atggcaagtt cccattctca aaaattatag
//
LOCUS       DAWITQ010000193         2978 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.193, whole genome shotgun sequence.
ACCESSION   DAWITQ010000193 DAWITQ010000000
VERSION     DAWITQ010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2978)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2978)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2978
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.193"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            113..2878
                     /locus_tag="WIX18_001983"
     CDS             113..2878
                     /locus_tag="WIX18_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ5239030.1"
                     /translation="MRSSFRLKPICFYLMGVMLYHHSYAEDAGRAGSEAQIQVLEDVH
                     VKAKRVPKDKKVFTDARAVSTRQDIFKSSENLDNIVRSIPGAFTQQDKSSGIVSLNIR
                     GDSGFGRVNTMVDGITQTFYSTSTDAGRAGGSSQFGASVDSNFIAGLDVVKGSFSGSA
                     GINSLAGSANLRTLGVDDVVQGNNTYGLLLKGLTGTNSTKGNAMAAIGARKWLESGAS
                     VGVLYGHSRRSVAQNYRVGGGGQHIGNFGAEYLERRKQRYFVQDGQLKFNSDSGKWER
                     DLQRQQWKYPWYKKYENPQELQKYIEEHDKSWRENLAPQYDITPIDPSSLKQQSAGNL
                     FKLEYDGVFNKYTAQFRDLNTKIGSRKIINRNYQFNYGLSLNSYANLNLTAAYNSGRQ
                     KYPKGSKFTGWGLLKDFETYNNAKILDLNNTATFRLPRETELQTTLGFNYFHNEYGKN
                     RFPEELGLFFDGPDQDNGLYSYLGRFKGDKGLLPQKSTIVQPAGSQYFNTFYFDAALK
                     KDIYRLNYSTNTVGYRFGGEYTGYYGSDDEFKRAFGENSPTYREHCNQSCGIYEPVLK
                     KYGKKRANNHSVSISADFGDYFMPFASYSRTHRMPNIQEMYFSQIGDSGVHTALKPER
                     ANTWQFGFNTYKKGLLKQDDTLGLKLVGYRSRIDNYIHNVYGKWWDLNGNIPSWVSST
                     GLAYTIQHRNFKDKVHKHGFELELNYDYGRFFTNLSYAYQKSTQPTNFSDASESPNNA
                     SKEDQLKQGYGLSRVSALPRDYGRLEVGTRWLGNKLTLGGAMRYFGKSIRATAEERYI
                     DGTNGGNTSNVRQLGKRSIKQTETLARQPLIFDFYAAYEPKKNLIFRAEVKNLFDRRY
                     IDPLDAGNDAATQRYYSSFDPKDKDEDVTCNADGLCNGKYGGTSKSVLTNFARGRTFL
                     ITMSYKF"
BASE COUNT          846 a          750 c          726 g          656 t
ORIGIN      
        1 ccaattgaaa tcttcagacg gtatatcgaa tttacacttt ttaatgttta tgccgcctaa
       61 aaaaatgcta atatatttct taattgtctg actgtttatt gttgaggaaa atatgagatc
      121 ttctttccgg ttgaagccga tttgttttta tcttatgggt gttatgctat atcatcatag
      181 ttatgccgaa gatgcagggc gcgcgggcag cgaggcgcag atacaggttt tggaagatgt
      241 gcacgtcaag gcgaagcgcg taccgaaaga caaaaaagtg tttaccgatg cgcgtgccgt
      301 atcgacccgt caggatatat tcaaatccag cgaaaacctc gacaacatcg tacgcagcat
      361 acccggtgcg tttacacagc aagataaaag ctcgggcatt gtgtctttga atattcgcgg
      421 cgacagcggg ttcgggcggg tcaatacgat ggtggacggc atcacgcaga ccttttattc
      481 gacttctacc gatgcgggca gggcaggcgg ttcatctcaa ttcggtgcat ctgtcgacag
      541 caattttatt gccggactgg atgtcgtcaa aggcagcttc agcggctcgg caggcatcaa
      601 cagccttgcc ggttcggcga atctgcggac tttaggcgtg gatgacgtcg ttcagggcaa
      661 taatacctac ggcctgctgc taaaaggtct gaccggcacc aattcaacca aaggtaatgc
      721 gatggcggcg ataggtgcgc gcaaatggct ggaaagcgga gcatctgtcg gtgtgcttta
      781 cgggcacagc aggcgcagcg tggcgcaaaa ttaccgcgtg ggcggcggcg ggcagcacat
      841 cggaaatttt ggcgcggaat atctggaacg gcgcaagcaa cgatattttg tacaagacgg
      901 ccagttgaaa ttcaattccg acagcggaaa atgggagcgg gacttgcaaa gacaacagtg
      961 gaaatacccg tggtataaaa aatacgaaaa cccccaagaa ctgcaaaaat acatcgaaga
     1021 gcatgacaaa agctggcggg aaaacctggc gccgcaatac gacatcaccc ccatcgatcc
     1081 gtccagcctg aagcagcagt cggcaggtaa tctgtttaaa ttggaatacg acggcgtatt
     1141 caataaatac acggcgcaat ttcgcgattt aaacaccaaa atcggcagcc gcaaaatcat
     1201 caaccgcaat tatcaattca attacggttt atctttaaac tcatatgcca acctcaatct
     1261 gaccgcagcc tacaattcgg gcaggcagaa atatccgaaa gggtcgaagt ttacaggctg
     1321 ggggctttta aaagattttg aaacctacaa caacgcgaaa atcctcgacc tcaacaacac
     1381 cgccaccttc cggctgcccc gcgaaaccga gttgcaaacc actttgggct tcaattattt
     1441 ccacaacgaa tacggcaaaa accgctttcc tgaagaattg gggctgtttt tcgacggtcc
     1501 ggatcaggac aacgggcttt attcctattt ggggcggttt aagggcgata aagggctgct
     1561 gccccaaaaa tcaaccatcg tccaaccggc cggcagccaa tatttcaaca cgttctactt
     1621 cgatgccgcg ctcaaaaaag acatttaccg cttaaactac agcaccaata ccgtcggcta
     1681 ccgtttcggc ggcgaatata cgggctatta cggctcggat gacgaattta agcgggcatt
     1741 cggagaaaac tcgccgacat acagggaaca ttgcaaccag agctgcggaa tttatgaacc
     1801 cgtattgaaa aaatacggca aaaagcgcgc caacaaccat tcggtcagca ttagtgcgga
     1861 cttcggcgat tatttcatgc cgttcgccag ctattcgcgc acacaccgta tgcccaacat
     1921 ccaagaaatg tatttttccc aaatcggcga ctccggcgtt cacaccgcct taaaaccaga
     1981 gcgcgcaaac acttggcaat ttggcttcaa tacctataaa aaaggattgt taaaacaaga
     2041 tgatacatta ggattaaaac tggtcggcta ccgcagccgc atcgacaact acatccacaa
     2101 cgtttacggg aaatggtggg atttgaacgg gaatattccg agctgggtca gcagcaccgg
     2161 gcttgcctac accatccaac accgcaattt caaagacaaa gtacacaaac acggttttga
     2221 gttggagctg aattacgatt atgggcgttt tttcaccaac ctttcttacg cctatcaaaa
     2281 aagcacgcaa ccgaccaact tcagcgatgc gagcgaatcg cccaacaatg cgtccaaaga
     2341 agaccaactc aaacaaggtt atgggttgag cagggtttcc gccctgccgc gagattacgg
     2401 acgtttggaa gtcggtacgc gctggttggg caacaaactg actttgggcg gcgcgatgcg
     2461 ctatttcggc aagagcatcc gcgcgacggc tgaagaacgc tatatcgacg gcaccaacgg
     2521 gggaaatacc agcaatgtcc ggcaactggg caagcgttcc atcaaacaaa ccgaaaccct
     2581 tgcccgccag cctttgattt ttgattttta cgccgcttac gagccgaaga aaaaccttat
     2641 tttccgcgcc gaagtcaaaa atctgttcga caggcgttat atcgatccgc tcgatgcggg
     2701 caatgatgcg gcaacgcagc gttattacag ctcgttcgac ccgaaagaca aggacgaaga
     2761 cgtaacgtgt aatgctgatg gcttgtgcaa cggcaaatac ggcggcacaa gcaaaagcgt
     2821 attgaccaat tttgcacgcg gacgcacctt tttgataacg atgagctaca agttttaaag
     2881 gcagcccgcg ttttgtggaa aaccgcaatg ccgtctgaaa gcccttcaga cggcatttgt
     2941 ttccccaaac gcatcatcct gccgcaagcc tatgccaa
//
LOCUS       DAWITQ010000194         2967 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.194, whole genome shotgun sequence.
ACCESSION   DAWITQ010000194 DAWITQ010000000
VERSION     DAWITQ010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2967)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2967)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2967
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.194"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            121..1665
                     /gene="purF"
                     /locus_tag="WIX18_001984"
     CDS             121..1665
                     /gene="purF"
                     /locus_tag="WIX18_001984"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEZ5239031.1"
                     /translation="MCGVLGLVSHEPVNQFLYDGLQMLQHRGQDAAGIATAEGGTFHM
                     HKGKGMVREVFRTRNMRDLTGNAGIAHVRYPTAGNAGSSAEAQPFYVSSPFGIVLAHN
                     GNLTNTAELYENVCNKHLRHVNTSSDSEVLLNVFAHELRREVSKNADPHRLNADNIFN
                     AVAQVHRLVRGAYGVIAMIAGYGMLAFRDPYGIRPLVLGSQTDSEGRKSYAVASESVA
                     FNALTYDLERDIRPGEAVFVGFDGTMIARQCSDRAKLSPCLFEYVYFARPDSVIDGVS
                     VYQSRLDMGVSLAEKIKRELPVDGIDVVMPIPDTSRPSAMELAVHLDKPYREGLIKNR
                     YIGRTFIMPGQATRKKSVRQKLSPMETEFAGKSVLLVDDSIVRGTTSREIVEMVRAAG
                     ARKVYIASAAPEVRYPNVYGIDMPTREELIANGRSAAEIAAEIGADGIVFQDLGDLEA
                     VVKALNPKIESFDSSCFNGIYQTGDIDDAYLDRLSAEKSGCGGLKIHPSRMEHSISIS
                     DAGDEE"
     gene            1765..2256
                     /gene="greB"
                     /locus_tag="WIX18_001985"
     CDS             1765..2256
                     /gene="greB"
                     /locus_tag="WIX18_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HEZ5239032.1"
                     /translation="MSTETKNYITPAGWQALKDELYQLVNKERPEIVQIVNWAAGNGD
                     RSENGDYLYGKRRMREIDRRIRFLTKRLESAVVVDPELREATDQVFFGATVGLLRGDG
                     REQTVKIVGIDEIDTAQNKISWISPLARCLIKAREGDEVVLNTPEGREEIEILSVEYI
                     KID"
     gene            2315..2941
                     /locus_tag="WIX18_001986"
     CDS             2315..2941
                     /locus_tag="WIX18_001986"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HEZ5239033.1"
                     /translation="MRKIRTKICGITTPEDASAAVAAGADAVGLVFFQGSSRAVDIAR
                     AKKITAALPPFVSVVALFVNESAQNIRRILAEVPIHIIQFHGDEDDTFCRQFHRPYIK
                     AIRVQTTSDIRNAADRFPDAQALLFDAYHPSEYGGTGHRFDWTLLAEYSGKPWVLAGG
                     LTPENVGEAVRITGAEAVDVSGGVEASKGKKDPAKVAAFIATTNRLSR"
BASE COUNT          714 a          906 c          772 g          575 t
ORIGIN      
        1 tattctccat aaacccacct atctgtcctt cgctcaaata ttgtcaacaa ttcaggcaaa
       61 aaaccaccgt ttactttata attccgtttt acccttaaac ctcgaatcgg agaagacgat
      121 atgtgcggcg tattaggttt ggtcagtcat gaacccgtga accagtttct gtacgacggc
      181 ttgcagatgt tgcagcacag ggggcaggat gcggcgggca ttgcaacggc ggaaggcggt
      241 accttccata tgcacaaagg caaaggcatg gtgcgcgaag tgttccgcac acgcaatatg
      301 cgcgatttga ccggcaacgc cggtatcgcc cacgtccgtt atcctactgc gggcaacgca
      361 ggcagcagcg cggaggcgca gcctttctac gtcagctcgc cgttcggcat cgttttggcg
      421 cacaacggca acctcaccaa cactgccgaa ctgtatgaaa acgtgtgtaa caaacacctg
      481 cgccacgtca acaccagctc cgattccgaa gtcttgctca acgtattcgc gcacgaatta
      541 cgccgcgaag tctctaaaaa cgccgacccg caccggctca atgccgacaa tattttcaac
      601 gccgttgccc aagtccaccg cctggtgcgc ggcgcatacg gtgtgattgc catgattgcg
      661 ggctacggta tgctcgcctt ccgcgaccct tacggcatcc gcccgctggt attgggttcg
      721 caaaccgaca gcgaaggcag aaaatcctat gccgtcgcct ccgaatccgt cgccttcaac
      781 gcgcttacct acgatttgga acgcgacatc cggccgggcg aagcggtatt tgtcggcttt
      841 gacggcacaa tgattgcccg ccaatgcagc gaccgtgcca aactcagccc ctgccttttt
      901 gaatatgttt attttgcccg ccccgactct gtgattgacg gcgtatccgt ttaccaatcg
      961 cgcttggata tgggcgtgtc gctggcggaa aaaatcaaac gcgagctgcc cgtggacggc
     1021 atcgatgtcg tgatgcccat tcccgacacc agccgcccca gcgcgatgga gcttgccgtc
     1081 catctcgaca aaccctaccg cgagggtttg attaaaaacc gctatatcgg ccgcaccttt
     1141 attatgcccg gacaggcgac gcgcaaaaaa tccgtgcgcc aaaaactcag cccgatggaa
     1201 accgaatttg caggcaaaag cgtgttgctg gtggacgact ccatcgtgcg cgggacgacc
     1261 agccgcgaaa tcgtcgaaat ggtacgcgcg gcgggcgcgc gcaaagtcta tatcgcctcc
     1321 gccgcgcccg aagtgcgcta tcccaatgtg tacggcattg atatgcccac gcgcgaagag
     1381 ttgattgcca acgggcgcag cgcggcggaa atcgccgccg aaatcggcgc ggacggcatc
     1441 gtatttcaag acttgggcga tttggaagcc gtcgtcaaag cactcaatcc gaaaatcgaa
     1501 tccttcgatt cgtcctgttt caacggcatt tatcagaccg gcgacatcga tgatgcctac
     1561 ctcgaccgcc tgtctgccga gaaatccggc tgcggcggtc tgaaaatcca cccgagcagg
     1621 atggaacaca gcatcagcat cagcgatgcg ggcgacgaag aataaggctt cccaaaccgc
     1681 gatgccgtct gaaatccgaa cgccgggttt tcagacggca tttcccatat cggcatcaca
     1741 tttcccgttt catccgcaca caatatgagt accgaaacca aaaactacat tacgcccgcc
     1801 ggatggcagg cattgaaaga cgagctttat caactggtca acaaagaacg ccccgaaatc
     1861 gtccaaatcg tcaactgggc ggcaggcaac ggcgaccgca gcgaaaacgg cgactatctt
     1921 tacggcaaac gccgtatgcg cgaaatcgac cgccgcatcc gtttcctgac caagcgtttg
     1981 gagtccgccg tcgtcgtcga tcccgaattg cgcgaagcga ccgaccaagt atttttcggc
     2041 gcgaccgtcg gcctgttgcg cggcgacggg cgcgagcaaa ccgtcaaaat cgtcggcatc
     2101 gatgaaatcg ataccgcgca aaacaaaatt tcttggattt cgccgttggc gcgttgcctg
     2161 attaaagcgc gcgaaggcga cgaagtggtt ttgaacacgc cggaagggcg tgaggaaatt
     2221 gaaatccttt ctgtcgaata catcaaaatc gactgatcgg gaatgccgtc tgaaacggtg
     2281 caagcgcgcc gtttcccaaa taaaggaata ccgaatgagg aaaatccgca ccaaaatctg
     2341 cggcatcacc acaccggaag acgcatcggc cgccgtagcg gcaggtgcag atgccgtcgg
     2401 gctggtcttt ttccaaggca gcagccgggc cgtcgatatt gcccgcgcca aaaaaatcac
     2461 cgccgcactg ccgccgtttg tcagcgttgt cgcccttttc gtcaacgaaa gcgcgcaaaa
     2521 catccgccgc atccttgccg aagtgccgat acacatcatc caattccacg gcgacgaaga
     2581 cgacacattc tgccgtcagt tccaccgccc ctatatcaag gccattcgtg ttcagacgac
     2641 atcagacatc cgaaacgccg ccgaccgctt ccccgacgct caggcactgc ttttcgatgc
     2701 ctaccatcct tcggaatacg gcggcaccgg acaccgcttc gactggacgc tgctggcgga
     2761 atattcgggc aaaccgtggg tacttgccgg cgggctgacc cctgaaaacg tcggcgaagc
     2821 cgtccgcatc accggagcgg aagcggtcga tgtatccggc ggcgtggaag cgtctaaagg
     2881 caaaaaagac ccagccaaag tcgccgcctt tatcgcaacc accaaccgcc tatcccgtta
     2941 aagcaacaaa aattgccgcc ggaatga
//
LOCUS       DAWITQ010000195         2954 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.195, whole genome shotgun sequence.
ACCESSION   DAWITQ010000195 DAWITQ010000000
VERSION     DAWITQ010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2954)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2954)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2954
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.195"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..>2954
                     /locus_tag="WIX18_001987"
     CDS             <1..>2954
                     /locus_tag="WIX18_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HEZ5239034.1"
                     /translation="IDANGRLVNSGTMAAANAKDTDNTAEHKVNIRSQGVENSGTAVS
                     QQGTQIHSQSIQNTGTLLSSGEILIHNSGSLKNETSGTIEAARLAIDTDTLNNQGKLS
                     QTGSQKLHIDAQGKMDNRGRMGLQDTAPTASNGSSNQTGNSYNASFHSSTTTPTTATG
                     TGTATVSISNITAPTFADGTIRTHGALDNSGSIIANGQTDVSAQQGLNNAGQIDIHQL
                     NAKGSAFDNHNGTIISDAVHIQAGSLNNQNGNITTRQQLEIETDQLDNAHGKLLSAEI
                     ADLAVSGSLNNQNGEIATNQQLIIHDGQQSTAVIDNTNGTIQSGRDVAIQAKSLSNNG
                     TLAADNKLDIALQDDFYVERNIVAGNELSLSTRGSLKNSHTLQAGKRIRIKANNLDNA
                     AQGNIQSGGATDIGTQHNLTNRGLIDGQQTKIQAGQMNNIGTGRIYGDNIAIAATRLD
                     NQDENGTGAAIAARENLNLGIGQLNNRENSLIYSGNDMAVGGALDTNGQATGKAQRIH
                     NAGATIEAAGKMRLGVEKLHNTNEHLKTQLVETGREHIVDYEAFGRHELLREGTQHEL
                     GWSVYNDESDHLRTPDGAAHENWHKYDYEKVTQKTQVTQTAPAKIISGNDLTIDGKEV
                     FNTDSQIIAGGNLLVQTEKDGLHNEQTFGEKKVFSENGKLHSYWREKHKGRDSTGHSE
                     QNYTLPEEITRNISLGSFAYESHRKALSHHAPSQGTELPQSNGISLPYTSNSFTPLPS
                     SSLYIINPVNKGYLVETDPRFANYRQWLGSDYMLDSLKLDPNNLHKRLGDGYYEQRLI
                     NEQIAELTGHRRLDGYQNDEEQFKALMDNGATAARSMNLSVGIALSAEQVAQLTSDIV
                     WLVQKEVKLPDGGTQTVLVPQVYVRVKNGDIDGKGALLSGSNTQINVSGSLKNSGTIA
                     GRNALIINTDTLDNIGGRIHAQKSAVTATQDINNIGGILSVEQTLLLNAGNNINSQST
                     AASSQNTQGSST"
BASE COUNT          985 a          679 c          644 g          646 t
ORIGIN      
        1 attgatgcaa atggccgttt agtcaatagt ggcacgatgg ctgccgccaa tgcgaaagat
       61 acggataata cagcggaaca caaagtcaat atccgcagtc agggcgttga aaacagcggt
      121 acggcggtat cgcaacaagg cactcaaatt cacagtcagt cgattcaaaa cactggcaca
      181 ttattgtcct caggcgaaat attgattcac aattcgggca gcctgaaaaa tgaaacatca
      241 ggcaccattg aagccgctcg tttggctatt gataccgaca cacttaataa tcaaggcaaa
      301 ctctctcaaa caggttcaca aaaactccat attgatgcac aaggcaaaat ggataaccgt
      361 ggccgcatgg gtttacaaga taccgcacca accgcgtcaa atggttcaag caatcaaacc
      421 ggcaatagtt acaatgcatc tttccattca tccactacca caccaacaac ggcaacaggt
      481 acgggtactg caaccgtttc tatatcaaac ataactgcgc ctacctttgc tgatgggaca
      541 attcgcactc atggtgcact ggataattca ggcagtatta ttgccaatgg tcaaacagat
      601 gttagtgcgc aacaaggttt aaataatgca ggacaaatag acattcatca gttaaatgca
      661 aaaggttcgg cgtttgacaa tcacaatgga acaattatca gtgatgcggt ccacattcaa
      721 gccggcagcc tgaataatca aaatggcaac atcacaacac gccaacagtt agagattgaa
      781 accgatcaac tggataacgc tcatggcaag ttattatcag cagaaatagc ggatttagcc
      841 gtttcaggca gcctgaacaa tcaaaatggc gaaatagcga ccaatcaaca actgattatt
      901 cacgatggtc agcaatctac cgctgtcatt gataatacga atggcacgat acaatcaggc
      961 cgtgatgttg ctattcaggc aaaatcgtta tccaacaacg gcacacttgc cgctgataat
     1021 aaactggata ttgcgttaca agatgatttt tatgtagaac gcaatatcgt ggcgggcaat
     1081 gaattgtcgc tcagtacacg aggcagcctg aaaaattcac atactttgca agcaggaaaa
     1141 cgcattcgga ttaaagcaaa taaccttgat aatgcagcac aaggcaacat tcaatccggc
     1201 ggtgcaacag acattggcac gcagcacaat ttaaccaata gaggcttgat tgacggacaa
     1261 caaaccaaaa tccaagccgg gcaaatgaat aatatcggta caggtcggat ttatggcgac
     1321 aatatcgcta ttgcggctac ccgcttagac aatcaagatg aaaacggtac aggtgccgcc
     1381 attgcggcac gtgaaaacct gaatttaggc atcggacaat taaacaaccg tgaaaacagt
     1441 ctgatttaca gcggtaacga tatggcggtt ggcggcgcat tagataccaa tggccaagcc
     1501 acaggcaaag cccaaaggat acacaatgcc ggcgcaacca ttgaagccgc cggcaaaatg
     1561 cgtttaggcg tagaaaagct gcacaatacc aatgagcatt tgaaaacgca gttggtagaa
     1621 acagggcgcg agcatattgt tgattacgaa gcatttggac gacacgaatt attgcgggaa
     1681 ggcacacaac atgaattagg ctggtctgtc tataacgatg aatcagacca cttacgcacc
     1741 cctgatggag cggcgcatga aaattggcat aaatacgatt atgaaaaagt cacccaaaaa
     1801 acccaagtta cccaaactgc gccagccaaa atcatttcag gtaatgattt aaccattgat
     1861 ggtaaagaag tatttaatac cgatagccaa atcatcgccg gcggcaattt gcttgtgcaa
     1921 acagaaaaag acggtttgca taacgagcaa acctttggcg aaaagaaagt attcagtgaa
     1981 aatggcaaat tacacagcta ttggcgtgag aaacataaag gacgagactc aacgggacat
     2041 agcgaacaaa attacacttt gccggaggaa atcacacgca acatttcact gggttcattt
     2101 gcctatgaat cgcatcgcaa agcattaagc catcatgcgc ccagccaagg cactgagttg
     2161 ccgcaaagca acggtatttc gctaccctat acgtccaatt cttttacccc attacccagc
     2221 agcagcttat atattatcaa tcctgtcaat aaaggctatc ttgttgaaac cgatccacgc
     2281 tttgccaact accgtcaatg gttgggtagt gactatatgc tggacagcct caaactagac
     2341 ccaaacaatt tacataaacg tttgggtgat ggttattacg agcaacgttt aatcaatgaa
     2401 cagatcgcag agctgacagg gcatcgtcgt ttagacggtt atcaaaacga cgaagaacaa
     2461 tttaaagcct taatggataa tggcgcgact gcggcacgct ccatgaatct cagcgttggc
     2521 attgcattaa gtgccgagca agtagcgcaa ctgaccagcg atattgtttg gttggtacaa
     2581 aaagaagtta aacttcctga tggcggcaca caaaccgtat tggtgccaca ggtttatgta
     2641 cgcgttaaga atggcgacat agacggtaaa ggtgcattgt tgtcaggcag caatacacaa
     2701 atcaatgttt caggcagcct gaaaaactca ggcacgattg cagggcgcaa tgcgcttatt
     2761 atcaataccg atacgctaga caatatcggt gggcgtattc atgcgcaaaa atcagcggtt
     2821 acggccacac aagacatcaa taatattggc ggcattcttt ctgtcgaaca gacattattg
     2881 ctcaacgcag gcaacaacat caacagccaa agcaccgccg ccagcagtca aaatacacaa
     2941 ggcagcagca ccta
//
LOCUS       DAWITQ010000196         2944 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.196, whole genome shotgun sequence.
ACCESSION   DAWITQ010000196 DAWITQ010000000
VERSION     DAWITQ010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2944)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2944)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2944
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.196"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            2..457
                     /locus_tag="WIX18_001988"
     CDS             2..457
                     /locus_tag="WIX18_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEZ5239035.1"
                     /translation="MSTINVDIGQQVEPSKLLLSIVPEQTELVANLYIPSKAVGFIKP
                     KDKVVLRYQAYPYQKFGHATGEIISVARTALGKQELSGLGIIFTNPTLLNEPAYLVKV
                     KLEKQTIKAYGENKPLQIGMILEADILHERKKLYEWVLDPLYSISGKIN"
     gene            460..2547
                     /locus_tag="WIX18_001989"
     CDS             460..2547
                     /locus_tag="WIX18_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003700725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
                     /protein_id="HEZ5239036.1"
                     /translation="MDYLSRLSFGFNKKLPVILQTEVAECGLACLTSILSYYGFHTDL
                     RTLRQKYTLSLKGANLADIMRFGNEMNLTPRALRLELDELSNLQLPCILHWNLNHFVV
                     LCSISKDSIVIMDPAVGMRKIKMDEVSQKFTGIALELFPNTHFEEKKETKKIKILSLL
                     RGISGLKRSLIQMLILAISLEVFALVSPFFMQWVIDHVIVTADKNLLLTLTLGFGLLA
                     ILQQLISLLQAWVGMHPSTTLNLQWKANIFKRLLDLPNDYFSKRHLGDVISRFGSIDH
                     IQETLTSTFFVLVLNSLMAVFTFVLMTIYSTQLSLIVLLTLVLYILIRWLAYYPLRNA
                     TEENIVHEAKQNSYFMETIRGIQSVKLFDKHYQRHGTWMSLFVNTVNTKLTTDKLSAL
                     FEFSNKLLFSMENIIIIYLGASAILDGSFTVGVLMAFLAYKGQFESRTASLVDQYIQI
                     KMLGLHAERLADITLNETETEIIKYNHIPKLDNEQLVLKVENVSFRYADNEPYLFENI
                     NLEFKDNEAVVLTGQSGRGKSTLLNILTGSLKPETGTVSINGHDIYQVSPSFIRGLSG
                     IVRQDDVLFAGSIGENISFFDESPNMELIEQCAKMAQIHDDILKMPMGYETLIGDMGN
                     ILSGGQKQRVILARALYKRPKILFLDEASSHLDVENEQKINHNLKSLGIMKIMVAHRQ
                     ETIQSADKILNLG"
     gene            complement(2629..>2944)
                     /locus_tag="WIX18_001990"
     CDS             complement(2629..>2944)
                     /locus_tag="WIX18_001990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239037.1"
                     /translation="KNIPLKDFDEVCEKWEKSFKENGKEIEYNQKYSRIYGEVRGAGF
                     NGDIGEKLHRCAVMEWAENETVKLAQKWEQEQKKQQIQQKKETEKSPKHKASRDDWEM
                     ER"
BASE COUNT          960 a          519 c          495 g          970 t
ORIGIN      
        1 tatatcaaca attaatgttg atatagggca acaagttgaa ccgtctaaat tgctgttaag
       61 cattgtccct gaacaaactg aattggtcgc caatctttac atacccagta aagctgttgg
      121 ttttattaaa ccgaaagata aagttgtttt acgttaccaa gcgtaccctt accaaaaatt
      181 tggacatgcc acaggagaaa ttatttcagt tgccagaact gctctcggta aacaagagct
      241 atcaggttta ggtatcattt tcactaaccc aaccttatta aatgaacctg cctatcttgt
      301 gaaagttaaa ttggaaaaac aaacgattaa agcatacgga gaaaacaagc cgcttcaaat
      361 tggcatgatt ttagaagcag atattctcca tgaacgaaaa aaattgtacg aatgggtact
      421 tgacccactt tacagcattt caggaaaaat caattaaaaa tggattattt atcaagactg
      481 tcctttggat ttaacaaaaa gctacctgtc attctgcaaa cagaagttgc tgaatgtggt
      541 ttagcatgcc tgacatccat cttgtcctat tatggctttc acactgattt aagaacgtta
      601 cgccaaaaat acaccctgtc attaaagggc gcaaatcttg cagacatcat gagatttggc
      661 aatgaaatga atttaacgcc acgagctttg cgtttagagt tagatgagct gtcaaattta
      721 caactaccct gcattctcca ttggaactta aaccattttg ttgtactttg ttccatttcc
      781 aaagacagta tcgtcattat ggaccctgct gtcggtatgc gaaaaatcaa aatggacgaa
      841 gtttcacaaa aattcacagg gattgcccta gaattattcc ccaataccca ttttgaagag
      901 aaaaaagaaa caaagaaaat caaaatatta tctctattaa gggggatttc aggcttaaaa
      961 cgctctttaa ttcaaatgct tatattagct atttctttgg aagtctttgc attggttagt
     1021 ccattcttta tgcaatgggt aatagaccat gtcattgtaa ctgctgataa aaatttatta
     1081 ctgaccctta ctttgggatt tggtttactg gctatcctgc aacagttaat tagcctgtta
     1141 caagcatggg taggtatgca cccatctaca actcttaatt tacaatggaa agccaatata
     1201 tttaaaaggt tacttgactt acctaatgac tatttcagta aacgacattt aggagatgtg
     1261 atttcaagat ttggttcaat agatcatatc caagaaacac taacttctac tttttttgtt
     1321 ttagttttaa atagcttaat ggctgttttt actttcgtgt taatgacaat ttacagcact
     1381 caattatcgc tgattgttct tttaacactt gttttgtaca tactaattcg ttggcttgca
     1441 tattacccat taagaaatgc aacagaagaa aatattgttc atgaagccaa acaaaactca
     1501 tatttcatgg aaaccattcg tggtatccaa tcagttaaat tatttgataa acattatcaa
     1561 agacatggca cttggatgag cctatttgtg aatacagtca ataccaagct gacaacagat
     1621 aaactctctg ctttatttga attttcaaat aaactgttgt ttagcatgga aaatattatc
     1681 ataatttatc ttggtgcaag cgcaatttta gatggttcat ttacagtcgg tgttctgatg
     1741 gcttttttgg cttataaagg gcaatttgaa agcagaacag cttctctcgt tgaccaatac
     1801 atccaaatca aaatgttagg gcttcatgct gaacgtttgg ctgacattac tttaaatgaa
     1861 acagaaactg aaattattaa gtataatcat atacctaaat tagataatga acaactggtt
     1921 cttaaagttg aaaacgtctc attcagatat gctgataatg agccatatct ttttgaaaac
     1981 attaatttgg aatttaaaga taatgaagca gttgttttaa caggacaatc tggtcggggg
     2041 aagtccactt tgttaaacat tttaacaggt agcctaaaac ctgaaactgg tacagttagt
     2101 attaatgggc atgatatata tcaagtttct ccatccttta ttaggggatt gagcgggatt
     2161 gttcgccaag atgatgtcct ttttgcaggt tctattgggg aaaatatttc attttttgat
     2221 gaaagcccaa atatggagct cattgaacaa tgtgcaaaaa tggcacaaat acatgacgat
     2281 atacttaaaa tgccaatggg ctatgagacc ttgattggcg atatgggaaa tatcttatca
     2341 ggtggacaaa agcagagagt tatcttggct cgtgcattgt ataaacgacc caaaattcta
     2401 tttttagacg aagcaagtag ccatttagat gtagaaaatg aacaaaaaat taaccataac
     2461 ctaaaaagtc ttggtattat gaaaataatg gttgcacacc gccaagaaac aattcaatcg
     2521 gcagataaaa ttctgaattt aggttgaaca gaacaagact tcatttttct ttaacaaaaa
     2581 gtgaagtctt ttttcaaata atttaataga atacatgaaa atagcggttt aacgttccat
     2641 ttcccaatca tcacgactgg ctttgtgttt tggcgatttt tcagtttcct ttttctgttg
     2701 aatttgttgt tttttctgct cttgttccca tttttgggct aatttcacgg tctcattttc
     2761 agcccattcc atcacggcac aacgatgtag cttttctccg atatcgccat taaagccagc
     2821 tccacgaact tcaccataaa ttcttgaata tttttgatta tattcaattt cttttccatt
     2881 ttctttaaag gatttctccc acttttcaca aacttcatca aaatctttca aagggatatt
     2941 tttt
//
LOCUS       DAWITQ010000197         2883 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.197, whole genome shotgun sequence.
ACCESSION   DAWITQ010000197 DAWITQ010000000
VERSION     DAWITQ010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2883)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2883)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2883
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.197"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(97..573)
                     /gene="greA"
                     /locus_tag="WIX18_001991"
     CDS             complement(97..573)
                     /gene="greA"
                     /locus_tag="WIX18_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HEZ5239038.1"
                     /translation="MQKIPLTVRGAELLKQELQQLKSVARPEVIEAIAEARSHGDLSE
                     NAEYEAAKERQGFIEGRISELEHKLSVAHIINPTEIHAEGKIVFGTTVTLEDLETEEH
                     VTYQIVGEDEADIKQGKIYVGSPIARALIGKEEGDTAEVQAPGGVREYDIIEVRYI"
     gene            968..2269
                     /gene="aroA"
                     /locus_tag="WIX18_001992"
     CDS             968..2269
                     /gene="aroA"
                     /locus_tag="WIX18_001992"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HEZ5239039.1"
                     /translation="MTESLRLPAASLKPSTVALPGSKSISNRTLLLAALSDNTCEIHS
                     LLKSDDTDRMLEALDKLGVEIEYLAEDRLKVHGTGGRFPNRTADLFLGNAGTAFRPLT
                     AALAVLGGDYHLHGVPRMHERPIGDLADALRIAGADVEYLGKEHYPPLHIGKRQDNGE
                     RVIPIKGNVSSQFLTALLMALPLTGQAFEIRMVGELISKPYIDITLKLMAQFGVQVAN
                     ENYRVFKIPADAHYHAPEHLHVEGDASSASYFLAAGLIAATPVRVTGIGANSIQGDVA
                     FARELEKIGADVVWGENFVEVSRPKERAVQSFDLDANHIPDAAMTLAIVALATGQTCT
                     LRNIGSWRVKETDRIAAMANELRKLGAKVVEEAEAIHITPPKTLTPDAVIDTYDDHRM
                     AMCFSLVSLLGVPVVINDPKCTHKTFPTYFDVFSSLTETTE"
     gene            complement(2312..2845)
                     /locus_tag="WIX18_001993"
     CDS             complement(2312..2845)
                     /locus_tag="WIX18_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEZ5239040.1"
                     /translation="MFPPDKTLFLCLSALLLASCGTTSGKHRQPKPKQTVRQIQAVRI
                     SHIDRTQGSQELMLHSLGLIGTPYKWGGSSTATGFDCSGMIQFVYKNALNVKLPRTAR
                     DMAAASRKIPDSRLKAGDLVFFNTGGTHRYSHVGLYIGNGEFIHAPSSGKTIKTEKLS
                     TPFYAKNYLGAHTFFTE"
BASE COUNT          602 a          794 c          779 g          708 t
ORIGIN      
        1 ctatttgtac tgtctgcggc ttcgtcgcct tgtcctgatt tttgttaatc cactataatt
       61 tcctgcgtgt gtcgggtgta tcgaaatcaa gccgaatcaa atatatcgga cttcgataat
      121 gtcgtattcg cgcacgccgc ccggggcttg gacttccgcc gtatccccct cttccttgcc
      181 gattaaggcg cgggcgatgg gtgagccgac atagattttg ccctgtttga tgtcggcttc
      241 gtcttcgccg acaatttggt aggtaacgtg ttcttccgtt tccaaatctt ccagcgtaac
      301 cgtcgtaccg aacacgattt tgccttcggc gtggatttcg gtcggattga tgatgtgggc
      361 aacggaaagt ttgtgttcca gctcggaaat gcggccctcg ataaagcctt ggcgttcttt
      421 ggcggcttcg tattcggcgt tttcggacaa atcgccgtgc gaacgggctt cggcaatcgc
      481 ttcgatcact tcgggacgcg ccacgctttt gagctgctgc aattcctgtt tcagcaattc
      541 cgcaccgcgt acggtcaggg ggattttttg catcggtctt ttttctccat attccggcac
      601 accgttttgc ggcagcaagc ataccgcgta ccgtcttgtt ttgtgcgtcc ggatattaaa
      661 ataaaaatac aagccgcccg gaaaatcggc ggcttgtctg tcgttgaaca gcggctattc
      721 taccaaattc tatgaaattg gcaatcgtac cgtaccgtcc gcaaacgcca cctgcccgca
      781 acaaaagccg aaaatatgcc ggcaaaaaaa ttttagaaac aaaaaattta aaaataatca
      841 attttcggca taaaaaacca cattcacgga ctttaaaacc gaaaatgcca aacctgagat
      901 ttttcataca gcatttgcac cagtataatg caggctgttt ttatctttat aatattgacg
      961 ttttgccatg accgaatccc tccgcctccc tgccgcctcg ctcaaacctt ccaccgtcgc
     1021 cctgcccggc tccaaaagca tcagcaaccg caccctgctg ctcgccgcct tgtccgacaa
     1081 tacttgtgaa atccattccc tgctcaaatc cgacgatacc gaccgtatgc tcgaagcact
     1141 cgataaactc ggcgttgaaa tcgaatatct tgccgaagac cgtctgaaag tgcacggcac
     1201 aggcggacgc ttccccaacc gcactgccga tttgtttttg ggcaacgcgg gcacggcgtt
     1261 ccgtccgctg actgccgcac ttgccgtttt gggcggcgat tatcatctgc acggcgtgcc
     1321 tcgtatgcac gaacgcccca tcggcgattt ggccgatgcg ctgcggattg ccggcgccga
     1381 tgtcgaatat ctcggcaagg aacactatcc gccgcttcat atcggcaaac gtcaagacaa
     1441 cggcgaacgc gtgattccga ttaaaggcaa tgtgtccagc cagtttctga ccgccctttt
     1501 aatggcgttg ccgctgaccg ggcaggcgtt tgaaatccgt atggtcggcg aattgatttc
     1561 caagccctat atcgacatta ctttaaaact gatggcgcaa ttcggcgtac aggttgccaa
     1621 tgaaaactac cgcgtcttca aaattcccgc cgatgcgcac taccacgcgc ccgaacactt
     1681 gcacgtcgaa ggcgatgcct ccagcgcgtc ctacttcctc gcagccggtt tgattgctgc
     1741 cacgcccgtg cgcgtgaccg gcatcggcgc aaacagcata cagggcgatg tcgcctttgc
     1801 ccgcgagctg gaaaaaatcg gggcggacgt ggtttggggc gaaaacttcg tcgaagtttc
     1861 acgcccgaag gaacgtgccg tccaatcctt tgatttggat gcgaaccata tccccgatgc
     1921 cgccatgacc ctcgccatcg tcgcgcttgc tacagggcaa acctgcacgc tgcgcaacat
     1981 cggttcgtgg cgcgtcaaag aaaccgaccg catcgccgcg atggcaaacg agttgcgcaa
     2041 actcggggca aaagtcgtcg aagaagccga agcaattcac atcaccccgc ccaaaacgct
     2101 gacacccgac gccgtcatcg acacgtacga cgaccaccgc atggcgatgt gtttctcgct
     2161 ggtttcgctg ttgggcgtac ccgtcgtcat caacgatccg aaatgcaccc ataaaacctt
     2221 cccgacttat ttcgacgtgt tctcttcact gaccgaaaca acggaataag gcggcatttt
     2281 gccgcgattc cggcgcggcg cggcgggcgg ctcattctgt aaagaaagta tgtgcgccga
     2341 ggtagttttt ggcgtaaaac ggtgtggaga gtttttcggt tttgatggtt ttgccgctgc
     2401 tgggggcatg gatgaattcg ccgttgccga tatagagtcc gacgtgtgag tagcggtgtg
     2461 tgccgccggt gttgaagaat acgaggtcgc cggccttaag gcggctgtcg gggattttgc
     2521 ggcttgccgc cgccatgtcg cgggcggtgc gcggcagctt gacgttgagg gcgtttttgt
     2581 aaacgaattg aatcatgccg ctgcaatcga agccggttgc ggtgctgctg ccgccccatt
     2641 tgtagggcgt gccgatgagt ccgaggctgt ggagcatgag ttcctgcgag ccttgtgtgc
     2701 ggtcgatgtg gctgatgcgg acggcttgga tttgccggac tgtctgtttg ggtttcggtt
     2761 ggcggtgttt gccggaggtc gtgccgcatg aggcgaggag cagtgcgctg agacagagga
     2821 aaagggtttt gtcgggggga aacatggttt ttcctttgcg ggttcggata tccgtctgaa
     2881 ggt
//
LOCUS       DAWITQ010000198         2858 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.198, whole genome shotgun sequence.
ACCESSION   DAWITQ010000198 DAWITQ010000000
VERSION     DAWITQ010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2858)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2858)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2858
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.198"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            1..956
                     /locus_tag="WIX18_001994"
                     /pseudo
     CDS             1..956
                     /locus_tag="WIX18_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233115.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
     gene            998..1825
                     /locus_tag="WIX18_001995"
     CDS             998..1825
                     /locus_tag="WIX18_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HEZ5239041.1"
                     /translation="MQNHVISLASAAERRAHIAATFGARGIPFQFFDALMPSERLEQA
                     MAELVPGLSAHPYLSGVEKACFMSHAVLWKQALDEGLPYIAVFEDDVLLGEGAEKFLA
                     EDAWLKERFDPDSAFIVRLETMFMHVLTSPSGVADYCGRAFPLLESEHWGTAGYIISK
                     KAIRFFLQHFVMLQPEQIKPIDLMMFSDFFDKEGMPVYQVSPALCAQELHYAKFHDQN
                     SALGSLIEHDRLLNRKQQRRDSPANTFKRRLIRALTKISREREKRRQRREQFIVPFQ"
     gene            1837..1932
                     /locus_tag="WIX18_001996"
     CDS             1837..1932
                     /locus_tag="WIX18_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lacto-N-neotetraose biosynthesis glycosyl
                     transferase"
                     /protein_id="HEZ5239042.1"
                     /translation="MDIVFAADGRMRRLFTLRQYFGILRRLLKNR"
     gene            1974..2816
                     /locus_tag="WIX18_001997"
     CDS             1974..2816
                     /locus_tag="WIX18_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HEZ5239043.1"
                     /translation="MQNHVISLASAAERRAHIADTFGRHDIPFQFFDALMPSEELNRV
                     MAELVPGLAKQHLLSEVEKACFMSHAVLWKQALDEGLPYVAVFEDDVLLGKDAEKFLA
                     EDTWLEERFDKDSAFIVRLETMFAKVIVRPDKVLNYENRSFPLLESEHWGTAGYIISR
                     EAMRFFLERFAVLPAEWIKAVDWMMFTYFFDKEGMPVYQVNPALCTQELHYAKFLSKN
                     SMLGSDLEKDREQERRHRRSLKVMFDLKRALGKFGREKKKRMERQRQAELEKAYGRRV
                     ISFK"
BASE COUNT          762 a          663 c          767 g          666 t
ORIGIN      
        1 agaaaaatat ttcgcccaat cattagccgc cgtcgtgaat caaacttggt gcaacttgga
       61 tattttgatt gtcgatgacg gctcgacaga cggtacgctt gccattgcca aggattttca
      121 aaagcgggac agccgtatca aaatccttgc acaagctcaa aattccggcc tgattccctc
      181 tttaaacatc gggctggacg aattggcaaa gtcggggggg ggaatatatt gcacgcaccg
      241 atgccgacga tattgccgcc cccgactgga ttgagaaaat cgtgggcgag atggaaaaag
      301 accgcagcat catcgcgatg ggcgcgtggc tggaagtgtt gtcggaagaa aaggacggca
      361 accggctggc gcggcatcac aggcacggca aaatttggaa aaagccgacc cggcacgaag
      421 atattgccga ctttttccct ttcggcaacc ccatacacaa caacacgatg attatgcggc
      481 gcagtgtcat tgacggcggt ttgcgttaca acaccgagcg ggattgggcg gaagattacc
      541 aattttggta cgatgtcagt aaattgggca ggctggctta ttatcccgaa gccttggtca
      601 aataccgcct tcacgccaat caggtttcat ccaaatacag cgtccgccaa cacgaaatcg
      661 cgcagggcat ccaaaaaacc gccagaaacg attttttgca gtctatgggt tttaaaaccc
      721 ggttcgacag ccttgaatac cgccaaataa aagcagtagc gtatgaattg ctggagaaac
      781 atttgccgga agaagatttt gaacgcgccc gccggttttt gtaccaatgc ttcaaacgga
      841 cggacacgct gcccgccggc gcgtggctgg attttgcggc agacggcagg atgcggcggc
      901 tgtttacctt gaggcaatac ttcggcattt tgcaccgatt gctgaaaaac cgttgaaaaa
      961 cgccgcttta tccaacagac aaaaaacagg ataaattatg caaaaccacg ttatcagctt
     1021 agcttccgcc gcagaacgca gggcgcacat tgccgcaacc ttcggcgcgc gcggcatccc
     1081 gtttcagttt ttcgacgcac tgatgccgtc tgaaaggctg gaacaggcaa tggcggaact
     1141 cgtccccggc ttgtcggcgc acccctattt gagcggagtg gaaaaagcct gctttatgag
     1201 ccacgccgta ttgtggaaac aggcattgga cgaaggtctg ccgtatatcg ccgtatttga
     1261 ggacgacgtt ttactcggcg aaggcgcgga gaaattcctt gccgaagacg cttggctaaa
     1321 agaacgcttt gaccccgatt ccgcctttat cgtccgcttg gaaacgatgt ttatgcacgt
     1381 cctgacctcg ccctccggtg tggcggacta ctgcgggcgt gcctttccgc tgttggaaag
     1441 cgaacactgg gggacggcgg gctatatcat ttccaaaaaa gcgatacggt ttttcctgca
     1501 acatttcgta atgttgcagc cggaacagat aaaacctatc gacttaatga tgttcagtga
     1561 ttttttcgat aaggagggga tgcctgttta tcaggtcagt ccggccttat gcgcccaaga
     1621 gctgcattat gccaagtttc acgaccaaaa cagcgcattg ggcagcctga tcgaacacga
     1681 ccgcctcctg aaccgcaaac agcaaaggcg cgattccccc gccaacacat tcaaacgccg
     1741 cctgatccgc gccttgacca aaatcagcag ggaaagggaa aaacgccggc aaaggcgcga
     1801 acagttcatt gtgcctttcc aataaaagga ggagagatgg acatcgtatt tgcagcagac
     1861 ggcaggatgc ggcggctgtt taccttgagg caatacttcg gcattttgcg ccgattgctg
     1921 aaaaaccgtt gaaaaacgcc gctttatcca acagacaaaa aacaggataa attatgcaaa
     1981 accacgttat cagcttagct tccgccgcag aacgcagggc gcacattgcc gataccttcg
     2041 gcaggcacga cattccgttt cagtttttcg acgcactgat gccgtctgaa gaactgaatc
     2101 gggtgatggc ggaattggtg ccgggattgg caaaacagca cctgttgagc gaagtggaaa
     2161 aagcctgctt tatgagccac gccgtattgt ggaaacaggc attggatgaa ggtctgccct
     2221 atgttgccgt atttgaggat gatgtcctgc ttggcaaaga cgcagaaaag ttccttgccg
     2281 aagatacttg gttggaagag cgttttgata aggattctgc ctttatcgtt cgtttggaaa
     2341 cgatgtttgc gaaagttatt gtcagaccgg ataaagtcct gaattatgag aaccggtcat
     2401 ttcctttgct ggagagcgaa cattggggga cggctggcta tatcatttcg cgtgaggcga
     2461 tgcggttttt cttggaaagg tttgccgttt tgccggcaga gtggattaaa gcggtagatt
     2521 ggatgatgtt tacttatttc tttgataagg aggggatgcc tgtttatcag gttaatcccg
     2581 ccttatgtac ccaagaattg cattatgcca agttcctcag taaaaacagt atgttgggta
     2641 gcgatttgga aaaagatagg gaacaagaaa gaagacaccg ccgttcgttg aaggtgatgt
     2701 ttgacttgaa gcgtgctttg ggtaaattcg gtagagaaaa gaagaaaaga atggagcgtc
     2761 aaaggcaggc ggagcttgag aaagcttacg gcaggcgggt catatcgttc aaatagtttg
     2821 tgtaaaatat agcggattaa aattagaaat ggatacac
//
LOCUS       DAWITQ010000199         2802 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.199, whole genome shotgun sequence.
ACCESSION   DAWITQ010000199 DAWITQ010000000
VERSION     DAWITQ010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2802)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2802)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2802
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.199"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(20..826)
                     /locus_tag="WIX18_001998"
                     /pseudo
     CDS             complement(20..826)
                     /locus_tag="WIX18_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220133.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin D"
     gene            complement(840..1010)
                     /locus_tag="WIX18_001999"
     CDS             complement(840..1010)
                     /locus_tag="WIX18_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239044.1"
                     /translation="MNTETIYATVFCILAATISGLLVKFNVIKIETSINSKFMLLGIS
                     ILIIGIFLSIFF"
     gene            complement(2051..2287)
                     /locus_tag="WIX18_002000"
     CDS             complement(2051..2287)
                     /locus_tag="WIX18_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin transporter"
                     /protein_id="HEZ5239045.1"
                     /translation="MKELHTSELVEVSGGKFHIFAQGGGNLGKKDMVAVGKIGASYSP
                     NNSGVEFSVSKQFGYVQGLGVQFSKPTFGISKKW"
BASE COUNT          896 a          490 c          474 g          942 t
ORIGIN      
        1 tatttttgca aaggtctcaa cctgatttac tagctcgtat ggtttgttcg gatttcaaat
       61 caaaatccaa aatttcttgg ttcatttccg taatcgcacg gttgagttgg ctcaattcgg
      121 ttttatggcg ttcaggcagg ctgcttaatg tgattttctg ttcatcaagt tccctgattg
      181 cattattttg ttcacgtttt aggctctcca aacgtgagcg ttgttccaat aaatggcttt
      241 cggcggtcat cttatcttgt tgggatactg cgccttgact ggctaaaaac ttgttcttgt
      301 taagggtttt ttccgctaaa cgaatttgac gattttgccc tgtaatttgc tgtttaatat
      361 tctctaattg attgtttaaa cgatgaatgt tgttatgaac atttttttgc tcattttgat
      421 gaatgcgctt taaacgttcc aattcttgta atgccaaagt ttttttaagg ttggcttctg
      481 ctgccaattt ggcttgtacg tttccttttt cgccaaaacg cgatgtggaa agtttgaaca
      541 atggttcgcc agctttgaca aagttaccat cttcaacaaa tttatgcgta atcgtgccga
      601 tatcggaaga gtaaacacga accaccccca tagttggaag taattgacct tcaacggttg
      661 ttttattggt atagctacca aaaatcaaaa agataatgat acacagagca atgagaaaag
      721 cgcaaaaagt cagaaataaa aaagagaatg gacgggtcaa gataacctga cctgtccact
      781 tattttgttg ggctacaaag acttcttttc ggaataagtg ggacatttat tattatttct
      841 taaaaaaaaa tggatagaaa aataccaata attaaaatac ttatgcctaa taacataaat
      901 ttgctattga ttgatgtttc tattttaatt acattaaatt taaccaataa tccagaaatg
      961 gttgcagcta aaatgcaaaa gacagtggcg taaatggttt cagtattcat aatttttctc
     1021 tttcaaaatt gttcaatcta aatagaaaaa ggtaacttca atacatattg ctgtaactga
     1081 aattaccttt tccttaatga tgtaattatc ttatggcttc atcatgccac gaccgatatt
     1141 gtatccgcca gcaacagaga aaataccagc tcccattgcg tcaacccagc ctactggtcc
     1201 tgtccacttg ttccgttgag ctacaaagac ttctggtctg aaaaatgagt gattgttaga
     1261 catgtgtact tatttatgtt tctttgattg ggataaattt gtaaaaacaa aaaaaaggca
     1321 agttgttatt atagaagaac ttaaaatgct taacatactc attgaggttt gtaccacata
     1381 atgagatacg agataatttg ttgggagtaa aatcaaaaaa aagattaaat atttaaaata
     1441 atcactatat tttttcatta tttgttcctt tttgtattta agttcttatg aaaaactagg
     1501 gtattttgaa tagaaaatat caaaataccc tagttttatt aaggaatatt accaccaaca
     1561 agtgcttcca tattgtacag caccagtgat tgcaccacca atagctccga atttcgcacc
     1621 tggaatagca ccaataccac ctgcaaatga accaacaatt gccccaccag ctgctccacc
     1681 taatgcacta ccaatggtat tttttgagaa atcacgccag ttacaagcag caccagaaac
     1741 ttgttaaatt tcattcaaag tcaaaacttg cataatattc acctttgtta agtgtggttg
     1801 agaaaaaagt aaattttcat cgttactcat tatttgcaat catgcatata ctgtaaccaa
     1861 gcactatatt cagttggatc atagtttttc ctactgggtt gtctgatatg actattggca
     1921 ctattggcac aattgggatt agcaacttta ttgtgagtac ctaatggatt gatatttcct
     1981 gtaaagtggc tattgcatgc gcttaatgag catagattta ttaatgtcag aaaggataaa
     2041 acaaaaaatc ttaccatttt ttactaatac caaaagtagg tttcgaaaac tgtacaccaa
     2101 gaccttgtac atatccaaat tgcttgctaa cagaaaactc tactccacta ttgttagggg
     2161 aataggaagc accaatttta ccaacagcaa ccatatcttt tttacctagg ttgccgccac
     2221 cctgtgcaaa gatatggaat ttgccacctg acacttcaac taattcagag gtgtgtaact
     2281 ctttcatgat tttctcctgt aaagaagtat ggttggaaat gtaaatcaga attaaccttt
     2341 cttaagttta atttaatact ttttttgcaa gtattttatt ttaaattaaa tcaatatttt
     2401 aaaaatattt acttgtatac tgaaaaagaa actcctaatg gtggagtggg gcttttgttt
     2461 aagtaagcat taaaaaaatt taaatttccc attatgatta acttaatgca agagcttttt
     2521 caggacgtac aaaccagcga acgggcgttc tgatgtgggc agcctgccgg gaagtctgct
     2581 ctattgttcg gacaataggg ggaatatacc aattacttta actacatcat tttttgacat
     2641 ttttcttgcc tttcaattta aaatccaaaa tcatactgcc ataatttagc aatccaaaaa
     2701 aatttaggca gcagtaatgg tttcgtattt tagaaaacga aacttggttt ggtgttttga
     2761 agcatttcag tacacaaacg gggctgtcct agataactaa ga
//
LOCUS       DAWITQ010000200         2652 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.200, whole genome shotgun sequence.
ACCESSION   DAWITQ010000200 DAWITQ010000000
VERSION     DAWITQ010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2652)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2652)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2652
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.200"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(59..1429)
                     /gene="ffh"
                     /locus_tag="WIX18_002001"
     CDS             complement(59..1429)
                     /gene="ffh"
                     /locus_tag="WIX18_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEZ5239046.1"
                     /translation="MLDNLTGRFSNVFKNIRGQAKLTEDNIKEALREVRLALLEADVA
                     LPVVKEFINNVKEKALGQEVAGSLTPDQAFIGVVNKALTELMGRENKTLDLSVAPPAV
                     VLMAGLQGAGKTTTVGKLARLLKNDQKKKVLVVSADVYRPAAIEQLRLLAEQVGVDFF
                     PSDTNQKPVEIATAAVDYAKKHFYDVLMVDTAGRLAIDEEMMNEIKALHAAVNPVETL
                     FVIDAMLGQDAVNTAQAFNEALPLTGVVLTKMDGDSRGGAALSVRHVTGKPIKFIGVG
                     EKINGLEPFHPDRLASRILGMGDVLTLIEDVQKGIDEEAAAKMAKKLHKGKGFDLNDF
                     KEQIQQMRNMGGLENLMSKMPGELGQISKQIPEGTAEKAMGKVEAIINSMTPKERANP
                     ALLKASRKRRIAMGAGTTVQEVNKLLKQFEQMQQMMKMFSGNGLGKLMRMAKGMKGMK
                     GMFPGL"
     gene            1649..2455
                     /locus_tag="WIX18_002002"
     CDS             1649..2455
                     /locus_tag="WIX18_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YpjD"
                     /protein_id="HEZ5239047.1"
                     /translation="MPTVFIFLTAVYAGLGAFAWHCQQQGRGRDYPWKTELPVLGAAL
                     TVHGAALLMPVIQDKIIIMGFGYSGSLIVWMMLFIYFAGSFFYPLRGVQLLLYPCAAL
                     MLLSGLVFPGKFSGYEITDLPFMLHIGTSLLAYGLFGIATLLSVLTLLLNRSLHRRSF
                     SKLAGFLPSLLSLEKLMFQAMWAGFILLTYSVVSGTFFAEAVFGKPMTFTHKTVFGIL
                     SWLIYGGLLLKHSMTAWRGKKAAVWTIIGFVSLMIAYMGSKFVLEIILNR"
BASE COUNT          577 a          686 c          675 g          714 t
ORIGIN      
        1 agaatataaa acaaaaacgc cgtctgaaat tttagacggc gttttcggtc aaatcggctt
       61 acaaacccgg gaacattcct ttcattccct tcattccttt cgccatacgc atcagtttgc
      121 ccaagccgtt gccgctgaac atcttcatca tttgttgcat ttgttcaaac tgtttgagca
      181 atttgttcac ttcctgtacg gtcgtgcccg cacccattgc aatacggcgt ttgcggctgg
      241 ctttgagcag ggcagggttg gcgcgttctt taggggtcat cgagttgatg atggcttcta
      301 ctttgcccat cgctttttca gccgttcctt cggggatttg tttcgagatt tgacccagtt
      361 cgcccggcat tttcgacatc aggttttcca aaccgcccat attgcgcatt tgctggattt
      421 gttctttaaa gtcgttgagg tcgaagcctt tgcctttgtg cagctttttc gccattttgg
      481 cggcggcttc ttcatcaata cctttttgaa cgtcttcaat cagggtcaat acgtcgccca
      541 tgccgaggat acggctggca agacggtcgg ggtggaaagg ttcgaggccg ttgatttttt
      601 cgccgacacc gataaattta atcggtttgc cggttacgtg gcgcacggac aaagctgcgc
      661 cgccgcgcga atcgccgtcc atcttggtca atacgacacc ggtcagcggc agggcttcat
      721 taaatgcctg agcagtgttc accgcatcct gacccagcat cgcatcgatg acgaacaaag
      781 tttccaccgg gttaaccgcc gcgtgaaggg ctttgatttc gttcatcatc tcttcatcga
      841 ttgccaaacg gccggcggta tcgaccatca atacatcgta aaaatgtttt ttggcgtaat
      901 cgacggcggc agttgcaatt tcaaccggtt tttggttggt atcggacggg aaaaaatcca
      961 cgccgacctg ttcggccaac agacgcagct gttcaatcgc ggcaggacgg taaacgtcgg
     1021 cggataccac caaaaccttt ttcttctgat cgtttttcaa caggcgggcg agtttgccga
     1081 cggtcgtcgt cttgcctgcg ccctgcaaac ctgccatcaa cacgacggcg ggcggcgcaa
     1141 ccgacaaatc cagcgttttg ttttccctgc ccatcagttc ggtcagggct ttgttgacca
     1201 cgccgataaa tgcctgatcc ggcgtcaggc tgcccgctac ttcctgaccg agggcctttt
     1261 ctttgacgtt gttgatgaac tctttgacga caggcagggc gacatccgcc tcaagcaggg
     1321 cgaggcggac ttcgcgcaag gcctctttaa tattgtcttc ggtcagtttg gcctgccccc
     1381 ggatgttttt gaagacattg ctgaagcggc cggttaaatt gtctaacata ctggtccttg
     1441 gtctgaataa gaatagcttg ccccatcagg ggcattcttt gttaaaataa aatcaaaata
     1501 atttgatgcg gcttgtgtgc cggacagcat atcggcaaat ccgtcaaggc ttgcccgaaa
     1561 cggggatttt acaattccaa cgttaaaagt tccaatattt cataagcggc cgcagacggc
     1621 gcaacagtat agatagagaa agtccaccat gccgacagtt ttcatctttt tgacggcggt
     1681 ttacgcagga ttgggtgcat ttgcatggca ctgccaacag caggggcgcg gtcgggatta
     1741 cccgtggaag acggaattgc cggttttggg cgcggcattg accgtccacg gcgcggcact
     1801 gctgatgccg gtcattcaag acaaaatcat cattatgggc ttcgggtatt ccggcagcct
     1861 gattgtttgg atgatgctgt ttatttattt tgccggcagc ttcttttatc cgctgcgcgg
     1921 agtgcagttg ctgctgtatc cttgcgccgc actgatgctg ctgtcaggtt tggtttttcc
     1981 tggaaaattc tcgggatatg aaattaccga ccttcccttt atgctgcata tcggaacttc
     2041 gctgcttgca tacgggctgt tcggcatcgc aacattattg tccgttttga ccctgctgct
     2101 gaatcgcagc ctgcaccgca ggagcttctc caagctcgca ggattcctgc cgtcgctgct
     2161 cagtttggaa aaactcatgt tccaggccat gtgggcaggt ttcatcctgc tgacctattc
     2221 cgtcgtcagc ggaacatttt ttgccgaagc cgtattcggc aaacccatga cctttaccca
     2281 taaaaccgta ttcggcatat tgtcatggct gatttacggc ggactgctgc tcaagcacag
     2341 catgaccgca tggcgcggca aaaaagccgc cgtgtggacc atcatcggat ttgtcagcct
     2401 gatgattgcc tatatgggca gcaagttcgt attggaaatc attctgaaca gataagaaga
     2461 gccaacagat gccgtctgag tccccgagtt tcagacggca tattcacaaa ggcgcaccgg
     2521 tcagaggagg gggaggaagg gattgttgga ggcggcgcag catttagcag aaataaaaaa
     2581 ccttatccga cagcgacatg acgaatttcc ccaaaaaaat cccactgaaa gcattgaccg
     2641 tttttccctg tg
//
LOCUS       DAWITQ010000201         2613 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.201, whole genome shotgun sequence.
ACCESSION   DAWITQ010000201 DAWITQ010000000
VERSION     DAWITQ010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2613)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2613)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2613
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.201"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(311..544)
                     /locus_tag="WIX18_002003"
     CDS             complement(311..544)
                     /locus_tag="WIX18_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HEZ5239048.1"
                     /translation="MKLTLMFREYCSLCHKMRDELKPFQDEYGFGLEVVDVDENPVLE
                     EKYNELVPVLLAGDEEICHWFLDEDRLKQFLER"
     gene            complement(710..910)
                     /locus_tag="WIX18_002004"
     CDS             complement(710..910)
                     /locus_tag="WIX18_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin-associated ferredoxin"
                     /protein_id="HEZ5239049.1"
                     /translation="MFVCICNAVTDHQIKETIAAGATTMGDLQSQLGVASCCGCCGEL
                     AASFLTAHNAQPTVTAGINVQA"
     gene            complement(1082..1957)
                     /gene="xerD"
                     /locus_tag="WIX18_002005"
     CDS             complement(1082..1957)
                     /gene="xerD"
                     /locus_tag="WIX18_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HEZ5239050.1"
                     /translation="MEEGLIDRLLETLWLDRRLSQNTLNGYRRDLEKIARRLSQSGRM
                     LKDADEADLAAAVYVDGEQRSSQARALSACKRLYIWMEREGIRTDNPTRLLKPPKIDK
                     NIPTLITEQQISRLLATPDTDTPHGLRDKALLELMYATGLRVSEAVGLNFGNVDLDRG
                     CITALGKGDKQRMVPMGQESAYWVERYYTEARPLLLKGRNCDALFVSQKKTGISRQLA
                     WMIVKEYASQAGIGHISPHSLRHAFATHLVQHGLDLRVVQDMLGHADLNTTQIYTHVA
                     NVWLQGVVKEHHSRN"
     gene            complement(2009..2449)
                     /locus_tag="WIX18_002006"
     CDS             complement(2009..2449)
                     /locus_tag="WIX18_002006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEZ5239051.1"
                     /translation="MDVKYEFTLPSSSGADFHSAEHLPLVVYFYPKDSTPGCTTEGLD
                     FNARLEQFEALGYTVVGISRDGVKAHQNFCAKQGFRFELLSDKDETVCRLFDVIKLKK
                     LYGKESLGIERSTFVLNKDGEIAHEWRKVKVAGHAQEVLETLSR"
BASE COUNT          698 a          745 c          522 g          648 t
ORIGIN      
        1 taccgattac acaaacacat atcatcttta cacaatcatg cttccatcaa cagtaaaaca
       61 tgatatgatt gccaacaata acatctcaca ataaattttc taatttttat tgaaaaaatc
      121 aataaataag aattctccca accgacaaat aaaataaaga aagggtcaat atgcaacacc
      181 gtagaagatt gacaatttac caggcatcca aacgtgcttc ctttactggc aggtcatccg
      241 ccccgcaaaa acgtaaagaa cgttgatttg aaaaaaatgc cgtctgaagt cctgcttcag
      301 acggcatttt ttaccgttcg agaaactgtt tcaacctgtc ctcatccaaa aaccagtggc
      361 agatttcctc atctcccgcc aacaaaacgg gaaccagttc attgtatttt tcttccaaaa
      421 caggattttc atccacatcg accacttcca gcccgaaccc gtattcatcc tgaaaaggtt
      481 tgagttcgtc gcgcattttg tggcacaagc tgcaatattc acgaaacatc aaggtcaatt
      541 tcatccgcgt ttccttatct gtcaatttgc acacgccaaa gccttagacg cagcagaatc
      601 atggtctatt tgggaaaaaa caatgttttc aaggaagatg atactcaagt cctgccaaaa
      661 acagcaaaaa tgccgtctga acagttcaga cggcatttcc aaaaccgttt tacgcttgaa
      721 cgttgatacc cgccgtaacc gtcggttgcg cattgtgcgc cgtcagaaac gaagcggcaa
      781 gctccccgca gcagccgcag cagctcgcta cgcccaattg cgactgcaaa tcgcccattg
      841 tggtcgcgcc ggcggcgatg gtttccttga tttgatggtc ggtaacggca ttgcagatgc
      901 agacaaacat tttgtgctcc gtgtgttctc aaactatcgt accgatagcg gcttttatta
      961 tcgtatgcaa atataaataa aaacggttcg cattgcaagg tcggcataca cggtttgtct
     1021 tggtaatttt ttatcaagtt ttcatttccg attgatttct tattaaaccg aagcagaagc
     1081 ctcagtttcg ggaatggtgt tccttcacta caccctgcaa ccatacattg gcaacatggg
     1141 tgtaaatctg cgtcgtattc aaatcggcat gtcccaacat atcctgaacc acgcgcaaat
     1201 ccaatccgtg ctgcaccaag tgcgtggcaa aggcgtggcg caggctgtgc gggctgatgt
     1261 gcccgatgcc tgcctgactt gcatattctt tgacaatcat ccatgccaac tgacgagaaa
     1321 tgcccgtctt tttctgactg acaaacaatg cgtcgcaatt cctgcctttc agcagaagtg
     1381 ggcgtgcctc cgtataatag cgttccaccc aatacgccga ctcctgcccc atcgggacca
     1441 tcctctgctt atcgcccttg cccagcgcgg taatacagcc cctgtccaaa tccacattgc
     1501 cgaagttcag cccgaccgcc tcgctgacgc gcaagccggt cgcgtacatc aattcgagca
     1561 gtgccttgtc ccgcaaaccg tgtggcgtat cagtatccgg agtggcaagc agccgggaaa
     1621 tctgctgttc tgtaatcagt gtcggaatat tcttgtcgat tttgggcggt ttcagcaaac
     1681 gggtgggatt gtccgtcctt atgccttcac gctccatcca tatatacagg cgtttgcacg
     1741 ccgataatgc gcgcgcctgc gaactccgtt gctctccgtc aacataaacc gccgccgcca
     1801 aatccgcttc gtccgcatcc ttcagcattc tgcccgattg ggacaggcgg cgggcgattt
     1861 tttccaaatc gcgccggtaa ccgtttaaag tattctgact gagccgcctg tccaaccaca
     1921 gcgtttcaag cagcctgtcg atcaaacctt cttccatacc gttccaaaca aatgccgtct
     1981 gaatcttctt cagacggcat ggttcacatt atcgggaaag cgtttccaac acttcctgtg
     2041 catgacccgc cactttgact ttccgccatt catgggcgat ttctccatcc ttattcaaga
     2101 cgaacgtact gcgctcgata cctaacgact ctttcccgta cagtttcttc aatttgatga
     2161 catcaaacag gcggcacact gtttcatcct tgtcgctcaa cagctcgaac cggaaaccct
     2221 gcttggcgca aaaattctga tgcgccttta cgccgtcgcg ggaaataccg accacggtat
     2281 aacccaatgc ctcaaactgt tccaaacgcg cattgaaatc caagccttcc gtcgtacagc
     2341 ccggcgtact gtctttcgga taaaaataca cgaccaaagg cagatgttct gccgaatgaa
     2401 aatccgcacc gctgctcgaa ggcagggtaa attcatattt cacatccata gtcctactcc
     2461 cgatattccc attattcaaa acggcacgca gacgcaccgc cgcaattgcc aaaccaaccc
     2521 cgattctacc gccccaaagg acaaggattc aaccgccgga aacatccaaa ccgacacacg
     2581 acggcatgaa aaatatccat gtcaaaccac aaa
//
LOCUS       DAWITQ010000202         2612 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.202, whole genome shotgun sequence.
ACCESSION   DAWITQ010000202 DAWITQ010000000
VERSION     DAWITQ010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2612)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2612)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2612
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.202"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(410..2044)
                     /gene="groL"
                     /locus_tag="WIX18_002007"
     CDS             complement(410..2044)
                     /gene="groL"
                     /locus_tag="WIX18_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271863.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEZ5239052.1"
                     /translation="MAAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAF
                     GGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAE
                     GMKYVTAGMNPTDLKRGIDKAVAALVDELKNIAKPCDTSKEIAQVGSISANSDEQVGA
                     IIAEAMEKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINDAEKQIAALDNP
                     FVLLFDKKISNIRDLLPVLEQVAKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAV
                     KAPGFGDRRKAMLQDIAILTGGVVISEEVGLSLEKATLEDLGQAKRIEIGKENTTIID
                     GFGDAAQIEARVAEIRQQIETATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEK
                     KDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHTGNADQDAGVQIVLRAVESP
                     LRQIVANAGGEPSVVVNKVLEGKGNYGYNAGSGEYGDMIEMGVLDPAKVTRSALQHAA
                     SIAGLMLTTDCMIAEIPEDKPAMPDMGGMGGMGGMM"
     gene            complement(2137..2427)
                     /locus_tag="WIX18_002008"
     CDS             complement(2137..2427)
                     /locus_tag="WIX18_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEZ5239053.1"
                     /translation="MTIRPLHDRVVVKRLEAEEKTASGIVLPGAAAEKPDMGEVIAVG
                     AGKIGKDGARRPLDVKVGDKIIFGKYSGQTVKADGEELLVMREEDIFGIVEK"
BASE COUNT          535 a          697 c          689 g          691 t
ORIGIN      
        1 cgaaaacagc cgaaaacctg tgttggggtt tcggctgtcg ggagggaaag gaattttgca
       61 aaggtctcaa acaaaaacag aaacctaaag tcccgtcatt cccgcgcagg cgggaatcca
      121 gaccaccaac gcggcaggaa tctatcggaa ataaccgaaa ccggacgaac ctagattccc
      181 gctttcgcgg gaatgacggc ggaaaggttg ctgtttttcc gataaattcc tgccgctctt
      241 cgtttttggg atggcgggaa ataaaacaaa agcgcgcgta tcaaaaaata acaatgcaaa
      301 gaacggtgtt ggcaatttta aggtttgcgc cttagccgca cttattcgca aaaaaaccgc
      361 acggcgttga ccgtgcggct tgttgtctga aggcttcaga cggcattgct tacatcatgc
      421 cgcccatacc acccatgccg cccatatcag gcatagccgg tttgtcttca gggatttcag
      481 caatcatgca gtctgtggtc agcatcaggc cggcgataga cgcggcgtgt tgcagcgcgg
      541 aacgggttac tttggcgggg tcgagtacgc ccatttcgat catgtcgccg tattcgccgc
      601 tgccagcgtt gtaaccatag ttgcctttgc cttccaacac tttgttcaca accacgctgg
      661 gttcgccgcc tgcgttggca acgatttggc gcagcggaga ctcaacggcg cgcaagacga
      721 tttgtacgcc tgcgtcttgg tctgcattgc cggtgtgcag gttttccaaa gcggcacggg
      781 cgcgcaacag ggctacgccg ccgcctgcga ccacgccttc ttcaacggct gcgcgggtag
      841 cgtgcagcgc gtcttccacg cggtcttttt tctctttcat ttcgacttcg gtagcggcgc
      901 cgactttgat cactgccacg ccgcctgcca atttagccac gcgctcttgc agtttttctt
      961 tgtcgtaatc gctggttgcg gtttcgattt gttggcggat ttcggcaaca cgcgcttcga
     1021 tttgggctgc gtcgccaaag ccgtcgatga tggtggtgtt ttctttaccg atttcgatgc
     1081 gtttggcttg acccaagtct tccaaagtcg ctttttccag agacaggccg acttcttcgg
     1141 aaatcaccac gccgccggtc aggatagcga tgtcttgcag catcgctttg cggcggtcgc
     1201 cgaagcccgg agctttgacg gcaacggttt tcaggatgcc tcggatgttg ttcaccacca
     1261 aagtcgccaa ggcttcgcct tctacgtctt cagcgataat caacagcgga cggctggctt
     1321 tcgccacttg ttccaaaaca ggcagcaggt cgcggatgtt gctgattttt ttgtcaaaca
     1381 gcaatacaaa cggattgtcc aaagcagcga tttgtttttc agcatcgttg atgaagtaag
     1441 gggacaggta gccgcggtcg aactgcatac cttcaaccac gtccagctcg ttttccaaag
     1501 atttgccgtc ttcaacggta atcacgcctt ctttgccgac tttttccatc gcttcggcga
     1561 taatcgcgcc gacttgttcg tcagagttgg cggaaatcga gccgacttgg gcgatttctt
     1621 tggaagtatc gcaaggtttg gcgatgtttt tcagctcgtc aaccaaagcg gcgacggctt
     1681 tgtcgatacc gcgtttcagg tcggtcggat tcatacctgc ggtaacatat ttcatgcctt
     1741 cggcaacgat ggattgtgcc agtacggtgg cggtagtcgt accgtcgccc gccacgtcgt
     1801 tggttttgga cgcaacttct ttcaccattt gcgcgcccat attttcaaac ttgtctttca
     1861 gttcgatttc tttggcgacg gttacgccgt ctttggtgat gtgcgggccg ccgaaagcgc
     1921 ggtcaaccac tacgttgcgg cctttgggac ccagggttac gcgcacggcg tttgccaaaa
     1981 tgttcacgcc gtttaccatt ttttggcgga cttcattgcc gaactgtacg tcttttgctg
     2041 ccatttcaat tctccaaaaa tcattaaaac tgtctgataa aaccgtttat gccgtctgaa
     2101 ggcggtttgc cgtttcagac ggcatcgtgt ccatatttat ttttcaacga tgccgaagat
     2161 gtcttcttcg cgcatcacca acagctcttc gccgtcggct ttgacggttt ggccgctgta
     2221 tttgccgaag atgattttgt cgccgacttt gacatccagc ggacggcgcg cgccgtcttt
     2281 accgattttg cccgcgccca cggcgatgac ttcgcccata tcgggttttt cggcggccgc
     2341 acccggcaaa acgatacccg atgcggtttt ttcttcagct tccaagcgtt tgacgacgac
     2401 gcggtcgtgt aaaggacgga tggtcatatt tatgctccga taaaatggtt tgaaaacaat
     2461 catctgcccg aacggttcgg acagattgaa gtggaaaccg ggctgccgcc tgccggccgc
     2521 ccgtatgaat cggcaaaatt agggtgtgtg cgggcaaatt caagtgaggc ggaaaaaatt
     2581 tatttccgcc gttttttata gtggactaaa tt
//
LOCUS       DAWITQ010000203         2584 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.203, whole genome shotgun sequence.
ACCESSION   DAWITQ010000203 DAWITQ010000000
VERSION     DAWITQ010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2584)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2584)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2584
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.203"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(196..267)
                     /locus_tag="WIX18_002009"
     tRNA            complement(196..267)
                     /locus_tag="WIX18_002009"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(232..234),aa:Arg,seq:cct)
     gene            complement(287..733)
                     /locus_tag="WIX18_002010"
     CDS             complement(287..733)
                     /locus_tag="WIX18_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HEZ5239054.1"
                     /translation="MNFSFVPLFLVTLILLGVVSNNNSITISATILLLMQQTALVQFV
                     PLVEKHGLNLGIILLTIGVLSPLVSGKAQVPPVAEFLNFKMISAVFIGIFVAWLAGRG
                     VPLMGQQPVLITGLLIGTVIGVAFMGGIPVGPLIAAGILSFVVGKG"
     gene            complement(738..1712)
                     /gene="ispB"
                     /locus_tag="WIX18_002011"
     CDS             complement(738..1712)
                     /gene="ispB"
                     /locus_tag="WIX18_002011"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HEZ5239055.1"
                     /translation="MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISA
                     GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATAN
                     NLFGNAAAVLVGDFLYTRAFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDI
                     TEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDY
                     SGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQVANDVRTALENADRSYFEKIHDYV
                     VRSDALAYSIGEARKAVDCAVTALDALPDSEVKDAMIQLAKESLVRVS"
     gene            complement(1728..1916)
                     /locus_tag="WIX18_002012"
     CDS             complement(1728..1916)
                     /locus_tag="WIX18_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239056.1"
                     /translation="MVNIRTPLCGTRHCIVICLFCQSLRGSDNHMPSEKMYPDGFADI
                     IARYLNQLSSGICRLTET"
     gene            1936..2244
                     /gene="rplU"
                     /locus_tag="WIX18_002013"
     CDS             1936..2244
                     /gene="rplU"
                     /locus_tag="WIX18_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HEZ5239057.1"
                     /translation="MYAVVKTGGKQYKVSVGEKLKVEQIPAELDSQIELTEVLMIADG
                     ESVKVGAPFIEGAKVTAKVVAHGRGEKVRIFKMRRRKHYQKRQGHRQNFTQIEIVAIA
                     "
     gene            2269..2541
                     /gene="rpmA"
                     /locus_tag="WIX18_002014"
     CDS             2269..2541
                     /gene="rpmA"
                     /locus_tag="WIX18_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HEZ5239058.1"
                     /translation="MASKKAGGSTRNGRDSEAKRLGVKAYGNELIPAGSIIVRQRGTK
                     FHAGDNVGMGKDHTLFAKVDGYVEFKTKGALNRKTVSIRPYTGSEE"
BASE COUNT          758 a          694 c          575 g          557 t
ORIGIN      
        1 ataaaacaac agatttccaa gccggaacat cttttacgga gcctgaaaat catttcatga
       61 ttctaccgtc ctaaaggtcg gtttttcaag caggaagaaa aagttttcag atggcaaaaa
      121 agccctccaa cactgaaagg ccttatatcg gaaacttccc gcaacacggg aaacagacaa
      181 atgcaaatcg tcaaacctcg ccaacaggaa tcgaacctgt attttacgct taggaggcat
      241 acgttctatc cgttgaacta tggcgagccg aaatgaaaag gagattttaa ccctttccga
      301 cgacaaaaga caagatgccg gccgcaatca gcggcccgac agggataccg cccataaatg
      361 ccaccccgat aaccgtcccg attaacagcc ctgtaattaa aacaggctgc tgtcccatca
      421 aaggcacgcc gcgtcccgcc agccaagcca cgaaaatacc gataaaaacg gcggatatca
      481 ttttaaaatt caaaaattcg gcaacgggag gaacctgcgc ctttcctgaa accaacggac
      541 tcaaaacccc tatggtcaaa agaatgatac cgagattcaa cccatgcttc tcgaccaacg
      601 ggacaaactg taccaatgcc gtctgctgca tcagcagcaa tatggttgcc gagatggtaa
      661 tcgaattgtt gttgctgacc acccccaaca gaatcagcgt aaccagaaac aggggaacaa
      721 aactgaaatt catcgcctca agacaccctg accaaagatt ccttcgccag ctgaatcatg
      781 gcatccttca cttcgctgtc gggcagggca tccaaggcgg taacggcaca atcgactgct
      841 ttgcgcgcct cgcctatcga atatgccaaa gcatccgaac ggacgacata atcgtggatt
      901 ttctcaaaat agctgcgatc tgcattttcc aaagcagtac gcacatcgtt cgcaacctgt
      961 tcggaaccct gacgcatcag ataaatcaaa ggcaaagtcg gttttccttc cgccaaatcg
     1021 tcgccgacgt ttttgccggt ttcttcggtt tcgccagaat agtccagcac atcgtcaata
     1081 atttggaatg ccgtaccgac atacataccg tagtctttca acgcctgttc gtgttcgggg
     1141 gaagccttgc ccaaaattgc gccgacttga gcggcagctt caaacaattt tgccgtttta
     1201 tattggatga cttggatata ttgttcttcg gtaatgtccg tattgccgat gttcatcagc
     1261 tgcatgactt cgccctcggc aataatgttg gttgcatccg ccatcacttc caaaacgcgc
     1321 atactgcccg aggcaaccat cagttgaaag gcgcgcgtgt ataaaaagtc gccaaccaac
     1381 acagccgccg cattgccgaa cagattgttt gccgttgccc gcccacggcg caaatcgctt
     1441 tcatcgacga catcgtcgtg caggagggtg gaagtgtgga taaactcgac catcgccgcc
     1501 agcgaataca gtttctcgtc atcataaccg acagccttac ccgccaaaat cgtcataatc
     1561 ggacgcaggc gtttgccgcc cgcgctgatg atatatgtac cgatttgcga aatcagtgcg
     1621 acatcggatt gcaccgcacg gttgatgact tcattgactt tggcaaggtc ttcaggcaga
     1681 tgtcgctgga aatagggcag attctcgagc atggcagact ctcaggttta cgtttccgtc
     1741 aaacggcaga taccgcttga aagctgattc aaatagcggg caattatatc agcaaagcca
     1801 tcagggtaca tcttttcaga cggcatatgg ttatccgaac cgcgcaaact ttgacaaaac
     1861 aggcaaataa caatacaatg ccgagttccg cacaatggtg tgcggatatt aaccataacc
     1921 cttatggagt tgagtatgta cgcggtcgta aaaaccggcg gcaaacagta taaagtttcc
     1981 gtcggcgaaa aattgaaagt agaacagata ccagccgaac tcgacagcca aatcgaactg
     2041 accgaagttt tgatgattgc tgacggcgaa tctgtaaaag ttggcgcacc ctttatcgaa
     2101 ggtgcaaaag taacggctaa agtagtggca cacggtcgtg gcgaaaaagt ccgcatcttc
     2161 aaaatgcgcc gccgcaaaca ctaccaaaaa cgccaaggcc accgccaaaa tttcacccaa
     2221 atcgaaatcg tggcaatcgc ctaaccttaa aacttaggag cattacaaat ggcaagtaaa
     2281 aaagcaggcg gcagcacccg caacggtcgc gattcagaag ccaaacgctt gggcgttaaa
     2341 gcctacggca acgagctgat tcccgcaggt tccatcatcg tacgccaacg cggtaccaaa
     2401 ttccacgcag gcgacaacgt aggcatgggc aaagaccaca ctttgttcgc caaagttgac
     2461 ggttatgtcg aattcaaaac caaaggcgcg ctgaaccgta aaactgtcag catccgtcct
     2521 tacaccggtt ctgaagaata atccaaccga tacctgaagc cgcatctttt cacgatgcgg
     2581 cttt
//
LOCUS       DAWITQ010000204         2516 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.204, whole genome shotgun sequence.
ACCESSION   DAWITQ010000204 DAWITQ010000000
VERSION     DAWITQ010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2516)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2516)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2516
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.204"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..275
                     /locus_tag="WIX18_002015"
     CDS             <1..275
                     /locus_tag="WIX18_002015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239059.1"
                     /translation="NPHHRHSRAGGNPKTQRNRNLSEKTETPPTVIPAKAGIQQHNAA
                     GIYRKKQKPPPTVIPAKAGIQQPKNHRNLSAKTETPTAVIPAKAGI"
     gene            477..2246
                     /locus_tag="WIX18_002016"
     CDS             477..2246
                     /locus_tag="WIX18_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA family autotransporter adhesin"
                     /protein_id="HEZ5239060.1"
                     /translation="MNKIYRIIWNSALNAWVVVSELTRNHTKRASATVATAVLATLLS
                     ATVQANATDTDEDEELESVVRSALVLQFMIDKEGNGEIESTGDIGWSIYYDDHNTLHG
                     ATVTLKAGDNLKIKQSGKDFTYSLKKELKDLTSVETEKLSFGANGNKVNITSDTKGLN
                     FAKETAGTNGDPTVHLNGIGSTLTDTLAGSSASHVDAGNQSTHYTRAASIKDVLNAGW
                     NIKGVKTGSTTGQSENVDFVRTYDTVEFLSADTKTTTVNVESKDNGKRTEVKIGAKTS
                     VIKEKDGKLVTGKGKGENGSSTDEGEGLVTAKEVIDAVNKAGWRMKTTTANGQTGQAD
                     KFETVTSGTKVTFASGNGTTATVSKDDQGNITVKYDVNVGDALNVNQLQNSGWNLDSK
                     AVAGSSGKVISGNVSPSKGKMDETVNINAGNNIEITRNGKNIDIATSMTPQFSSVSLG
                     AGADAPTLSVDDEGALNVGSKDANKPVRITNVAPGVKEGDVTNVAQLKGVAQNLNNRI
                     DNVDGNACAGIAQAIATAGLAQAYLPGKSMMAIGGGTYRGEAGYAIGYSSISDTGNWV
                     IKGTASGNSRGHFGTSASVGYQW"
     gene            2379..>2516
                     /locus_tag="WIX18_002017"
     CDS             2379..>2516
                     /locus_tag="WIX18_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HEZ5239061.1"
                     /translation="MSTFFQQTAQAMIAKHINRFPLLKLDQVIDWQPIEQYLNRQKTR
                     YL"
BASE COUNT          769 a          635 c          609 g          503 t
ORIGIN      
        1 gaaaccctca ccaccgtcat tcccgcgcag gcgggaatcc aaaaacgcaa cgcaacagga
       61 atttatcaga aaaaacagaa accccaccga ccgtcattcc cgcaaaagcg ggaatccagc
      121 aacacaacgc agcaggaatt tatcggaaaa aacagaaacc cccaccgacc gtcattcccg
      181 caaaagcggg aatccagcaa ccgaaaaacc acaggaatct atcagcaaaa acagaaaccc
      241 ccaccgccgt cattcccgca aaagcgggaa tctagacccg tcggcacgga aacttaccga
      301 ataaaacagt ttccttagat tccacgtcct agattcccgc cttcgcggga atgacgagat
      361 tttaagttgg gggaatttat cagaaaaccc ccaaccccca aaaaccgggc ggatgccgca
      421 ccatccgccc ccaaaccccg atttaaccat tcaaacaaac caaaagaaaa aacaaaatga
      481 acaaaatata ccgcatcatt tggaatagtg ccctcaatgc ctgggtagtc gtatccgagc
      541 tcacacgcaa ccacaccaaa cgcgcctccg caaccgtggc gaccgccgta ttggcgacac
      601 tgctgtccgc aacggttcag gcgaatgcta ccgataccga tgaagatgaa gagttagaat
      661 ccgtagtacg ctctgctctg gtgttgcaat tcatgatcga taaagaaggc aatggagaaa
      721 tcgaatctac aggagatata ggttggagta tatattacga cgatcacaac actctacacg
      781 gcgcaaccgt taccctcaaa gccggcgaca acctgaaaat caaacaaagc ggcaaagact
      841 tcacctactc gctgaaaaaa gagctgaaag acctgaccag tgttgaaact gaaaaattat
      901 cgtttggcgc aaacggtaat aaagtcaaca tcacaagcga caccaaaggc ttgaattttg
      961 cgaaagaaac ggctgggacg aacggcgacc ccacggttca tctgaacggt atcggttcga
     1021 ctttgaccga tacgcttgcg ggttcttctg cttctcacgt tgatgcgggt aaccaaagta
     1081 cacattacac tcgtgcagca agtattaagg atgtgttgaa tgcgggttgg aatattaagg
     1141 gtgttaaaac tggctcaaca actggtcaat cagaaaatgt cgatttcgtc cgcacttacg
     1201 acacagtcga gttcttgagc gcagatacga aaacaacgac tgttaatgtg gaaagcaaag
     1261 acaacggcaa gagaaccgaa gttaaaatcg gtgcgaagac ttctgttatt aaagaaaaag
     1321 acggtaagtt ggttactggt aaaggcaaag gcgagaatgg ttcttctaca gacgaaggcg
     1381 aaggcttagt gactgcaaaa gaagtgattg atgcagtaaa caaggctggt tggagaatga
     1441 aaacaacaac cgctaatggt caaacaggtc aagctgacaa gtttgaaacc gttacatcag
     1501 gcacaaaagt aacctttgct agtggtaatg gtacaactgc gactgtaagt aaagatgatc
     1561 aaggcaacat cactgttaag tatgatgtaa atgtcggcga tgccctaaac gtcaatcagc
     1621 tgcaaaacag cggttggaat ttggattcca aagcggttgc aggttcttcg ggcaaagtca
     1681 tcagcggcaa tgtttcgccg agcaagggaa agatggatga aaccgtcaac attaatgccg
     1741 gcaacaacat cgagattacc cgcaacggca aaaatatcga catcgccact tcgatgaccc
     1801 cgcaattttc cagcgtttcg ctcggcgcgg gggcggatgc gcccacttta agcgtggatg
     1861 acgagggcgc gttgaatgtc ggcagcaagg atgccaacaa acccgtccgc attaccaatg
     1921 tcgccccggg cgttaaagag ggggatgtta caaacgtcgc acaacttaaa ggtgtggcgc
     1981 aaaacttgaa caaccgcatc gacaatgtgg acggcaacgc gtgcgcgggt atcgcccaag
     2041 cgattgcaac cgcaggtttg gctcaggcct atttgcccgg caagagtatg atggcgatcg
     2101 gcggcggtac ttatcgcggc gaagccggtt acgccatcgg ctactcgagc atttctgaca
     2161 ctgggaattg ggttatcaag ggcacggctt ccggcaattc gcgcggtcat ttcggtactt
     2221 ccgcatctgt cggttatcag tggtaagggc tttttcgcct gtctgctgtt ggggcaggcg
     2281 gaaggtttga agggaagggt ggcgatttgc cgcctgagac ctttgcaaaa ttccccaaaa
     2341 tcccctaaat tcccaccaag acatttaggg gattttccat gagcaccttc ttccagcaaa
     2401 ccgcccaagc catgattgcc aaacacatca accgcttccc gctattgaag ttggaccagg
     2461 tgattgattg gcagccgatc gaacagtacc tgaaccgtca aaaaacccgt tacctt
//
LOCUS       DAWITQ010000205         2498 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.205, whole genome shotgun sequence.
ACCESSION   DAWITQ010000205 DAWITQ010000000
VERSION     DAWITQ010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2498)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2498)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2498
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.205"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            170..793
                     /gene="lolA"
                     /locus_tag="WIX18_002018"
     CDS             170..793
                     /gene="lolA"
                     /locus_tag="WIX18_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HEZ5239062.1"
                     /translation="MMKPHNLFQFLAVCSLTVSVASAQAGAVDALKQFNNDADGISGS
                     FTQTVQSKKKTQTAHGTFKILRPGLFKWEYTSPYKQTIVGDGQTVWLYDVDLAQVTKS
                     SQDQAIGGSPAAILSNKTALESSYTLKEDGSSNGIDYVLATPKRNNAGYQYIRIGFKG
                     GNLAAMQLKDSFGNQTSISFGGLNTNPQLSRGAFKFTPPKGVDVLSN"
     gene            1066..2205
                     /locus_tag="WIX18_002019"
     CDS             1066..2205
                     /locus_tag="WIX18_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ5239063.1"
                     /translation="MKKTLVAAAILSLALTACGGGSDTAAQTPSAKPEAGQSGKLNIY
                     NWSDYVDPETVAAFEKETGIKTRSDYYDSNETLEAKVLTGKSGYDLTAPSIANVGRQI
                     KAGAYQKIDKAQIPHYGNIDKDLLKMMEAVDPGNEYAVPYFWGINTLAINTQQVKKAL
                     GTDKLPENEWDLVFKPEYTAKLKSCGISYFDSAIEQIPLALHYLGKDPNSENPEDIKA
                     AVDMMKAVRGDVKRFSSSGYIDDMAAGNLCAAIGYGGDLNIAKTRAEEAANGVEIKVL
                     TPKTGVGVWVDSFMIPRDAQNVANAHRYIDYTLRPEVAAKNGSFVTYAPASRPARELM
                     DEKYTSDASIFPNKELMEKSFIVSPKSAESAKLGVKLWQGLKAGK"
     gene            2337..>2498
                     /locus_tag="WIX18_002020"
     CDS             2337..>2498
                     /locus_tag="WIX18_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ5239064.1"
                     /translation="MDLSIVVPIYNVESYLEACLNSIEPILSNENVELILVNDGSKDG
                     SEDICYKYID"
BASE COUNT          675 a          724 c          617 g          482 t
ORIGIN      
        1 gcggcacaca ttaaagggca gcgtggcgcg cctgcctttt ccgagcggtc aaaaaaatca
       61 gccctcggaa aacgctgttt gtaaaatgca aaccgcccgt aacgccgccc gtatgattgt
      121 tttgccgcgc cgatacttta cgccacaccc atcccaacaa ggaaaaataa tgatgaaacc
      181 gcacaacctg ttccaatttc tcgccgtttg ctccctgacc gtctccgtcg cttccgcaca
      241 ggcgggcgcg gtggacgcgc tcaagcaatt caacaacgat gccgacggta tcagcggcag
      301 cttcacccaa accgtccaaa gcaaaaagaa aacccaaacc gcgcacggca cgttcaaaat
      361 cctgcgcccg ggcctcttca aatgggaata cacttcgccc tacaaacaga ctattgtcgg
      421 cgacggtcaa accgtttggc tctacgatgt cgatttggca caagtgacca agtcgtccca
      481 agaccaggcc ataggcggca gccccgccgc catcctgtcg aacaaaaccg ccctcgaaag
      541 cagctacacg ctgaaagagg acggttcgtc caacggcatc gattatgtgc tggcaacgcc
      601 caaacgcaac aatgccggct accaatacat ccgcatcggc ttcaaaggcg gcaacctcgc
      661 cgccatgcag cttaaagaca gcttcggcaa ccaaacctcc atcagtttcg gcggtttgaa
      721 taccaatccc caactctcgc gcggcgcgtt caagtttacc ccgcccaaag gcgtggacgt
      781 gttgagcaac tgatgccgtc cgcctcgatg ccgtctgaat gccgccgagg cttcagacgg
      841 cattttcacg caggcggaac aatgtcccgc attaccgccc gatcgggcat cggaacggca
      901 aacccgtgaa aattaacggt tgcgccccgg ttgtttttgc cgtttaatgc aaaccttgct
      961 gcaccaaggg ccaagaaagc cgaccggccg cccccacagc ttccgatgca ggcggcccgt
     1021 ccgtccctgc aatgtttttt atttttgaac gaaaggtcga aaaccatgaa aaaaacactg
     1081 gtggcggcgg cgatcctgag cctcgccttg actgcgtgcg gcggcggaag cgataccgcc
     1141 gcccaaaccc cctccgccaa gcccgaagcc ggacaatcgg gcaaactcaa tatctacaac
     1201 tggtcggatt atgtcgatcc cgaaaccgtc gccgcctttg aaaaagaaac cggcatcaag
     1261 acgcgttccg attattacga cagcaacgaa acactggagg caaaagtcct gaccggcaaa
     1321 tccggctacg acctgaccgc gccgtccatc gccaacgtcg gccggcaaat caaagcgggt
     1381 gcgtatcaga aaatcgacaa ggcgcaaatc ccccattacg gcaacatcga taaagatttg
     1441 ctgaaaatga tggaagccgt cgatccgggc aacgaatatg ccgtgcctta tttctgggga
     1501 atcaatactt tggcaatcaa tacccagcag gtgaaaaagg cattgggtac ggacaagcta
     1561 cccgaaaacg agtgggattt ggtgttcaaa cccgaataca ccgccaaact caaatcctgc
     1621 ggcatcagct atttcgacag cgcaatcgaa cagattccct tggcgttgca ctatttgggc
     1681 aaagacccca acagtgaaaa tcctgaagac atcaaagccg ccgtcgatat gatgaaagcc
     1741 gtccggggcg acgtgaaacg cttcagctct tccggctata tcgacgatat ggcggcgggc
     1801 aacctgtgtg ccgccattgg ttacggcggc gatttgaaca ttgccaaaac ccgtgccgaa
     1861 gaagccgcaa acggcgtgga aatcaaagta ttgaccccga aaaccggcgt gggcgtgtgg
     1921 gtggattcct ttatgattcc gcgcgacgcg caaaacgtcg ccaacgccca ccgctatatc
     1981 gactacacgc tccggcccga ggtggcggcg aaaaacggca gcttcgttac ctacgcgccc
     2041 gccagccgtc ccgcgcgcga gctgatggat gaaaaataca cctccgacgc atcgattttc
     2101 ccgaacaaag aactgatgga aaaaagtttc atcgtatcgc ccaaatccgc agaatccgcc
     2161 aaactgggcg tgaagctgtg gcaagggctc aaggccggaa aataaccgca acctctgccg
     2221 tctgaaacct ttcgggcggc aggaaacggc gcgtccgtta tcaaacaggg ggcgtttccc
     2281 cgcccgcctg ttatgattgg gttaagatta aaatgattta gtaaaatgag aaagatatgg
     2341 atttaagtat cgtagttccc atttataatg tcgagagtta tttggaagcg tgtctaaatt
     2401 ccatagaacc tatattaagt aatgaaaatg tcgaacttat ccttgtgaat gacgggtcaa
     2461 aagacggaag tgaagatata tgttataaat atatagat
//
LOCUS       DAWITQ010000206         2484 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.206, whole genome shotgun sequence.
ACCESSION   DAWITQ010000206 DAWITQ010000000
VERSION     DAWITQ010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2484)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2484)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2484
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.206"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            77..2227
                     /gene="yccS"
                     /locus_tag="WIX18_002021"
     CDS             77..2227
                     /gene="yccS"
                     /locus_tag="WIX18_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01666 family membrane protein"
                     /protein_id="HEZ5239065.1"
                     /translation="MKTPLLKPLLITSLPVFASVFTAASIVWQLGEPKLAMPFVLGII
                     AGGLVDLDNRLTGRLKNIIATVALFTLSSLTAQSTLGTGLPFILAMTLMTFGFTILGA
                     VGLKYRTFAFGALAVATYTTLTYTPETYWLTNPFMILCGTVLYSTAIILFQIILPHRP
                     VQESVANAYDALGGYLEAKADFFDPDEAAWIGNRHIDLAMSNTGVITAFNQCRSALFY
                     RLRGKHRHPRTAKMLRYYFAAQDIHERISSAHVDYQEMSEKFKNTDIIFRIHRLLEMQ
                     GQACRNTAQALRASKDYVYSKRLGRAIEGCRQSLRLLSDSNDNPDIRHLRRLLDNLGS
                     VDQQFRQLQHNGLQAENDRMGDTRIAALETGSLKNTWQAIRPQLNLESSVFRHAVRLS
                     LVVAAACTIVEALNLNLGYWILLTALFVCQPNYTATKSRVRQRIAGTVLGVIVGSLVP
                     YFTPSVETKLWIVIASTTLFFMTRTYKYSFSTFFITIQALTSLSLAGLDVYAAMPVRI
                     IDTIIGASLAWAAVSYLWPDWKYLTLERTAALAVCSNGAYLEKITERLKSGETGDDVE
                     YRATHRRAHEHTAALSSTLSDMSSEPAKFADSLQPGFTLLKTGYALTGYISALGAYRS
                     EMHEECSPDFTAQFHLAAEHTAHIFQHLPETEPDDFQTALDTLRGELDTLRTHSSGTQ
                     SHILLQQLQLIARQLEPYYRAYRQIPHRQPQNAA"
BASE COUNT          608 a          953 c          484 g          439 t
ORIGIN      
        1 agctaaggcg aggcaacgcc gtactggttt ttgttaatcc actatattca cttcataaca
       61 ataaaccggt aaaaccatga aaaccccact cctcaagcct ctgctcatta cctcgcttcc
      121 cgttttcgcc agtgttttta ccgccgcctc catcgtctgg cagctaggcg aacccaagct
      181 cgccatgccc ttcgtactcg gcatcatcgc cggcggcctt gtcgatttgg acaaccgcct
      241 gaccggacgg ctgaaaaaca tcatcgccac cgtcgccctg tttaccctct cctcgctcac
      301 ggcacaaagc accctcggca cagggctgcc cttcatcctc gccatgaccc tgatgacctt
      361 cggctttacc attttaggcg cggtcgggct gaaataccgc accttcgcct tcggcgcact
      421 cgccgtcgcc acctacacca cacttaccta cacccccgaa acctactggc tgaccaaccc
      481 cttcatgatt ttatgcggca ccgtactgta cagcaccgcc atcatcctgt tccaaatcat
      541 cctgccccac cgccccgtcc aagaaagcgt cgccaacgcc tacgacgcac tcggtggcta
      601 cctcgaagcc aaagccgact tcttcgaccc cgatgaggca gcctggatag gcaaccgcca
      661 catcgacctc gccatgagca acaccggcgt catcaccgcc ttcaaccaat gccgttccgc
      721 cctgttttac cgccttcgcg gcaaacaccg ccacccgcgc accgccaaaa tgctgcgtta
      781 ctactttgcc gcccaagaca tacacgaacg catcagctcc gcccacgtcg attatcagga
      841 aatgtccgaa aaattcaaaa acaccgacat catcttccgc atccaccgcc tgctcgaaat
      901 gcagggacaa gcctgccgca acaccgccca agccctgcgc gcaagcaaag actacgttta
      961 cagcaaacgc ctcggccgcg ccatcgaagg ctgccgccag tcgctgcgcc tcctttcaga
     1021 cagcaacgac aatcccgaca tccgccacct gcgccgtctt ctcgacaacc tcggcagcgt
     1081 cgaccaacaa ttccgccaac tccagcacaa cggcctgcag gcagaaaacg accgcatggg
     1141 cgacacccgc atcgccgccc tcgaaaccgg cagcctcaaa aacacctggc aggcaatccg
     1201 tccgcagcta aacctcgaat caagcgtatt ccgccatgcc gtccgcctgt cccttgtcgt
     1261 tgccgccgcc tgcaccatcg tcgaagccct caacctcaac ctcggctact ggatactact
     1321 gaccgccctt ttcgtctgcc aacccaacta caccgccacc aaaagccgcg tccgccagcg
     1381 catcgccggc accgtactcg gcgtaatcgt cggctcgctc gtcccctact tcaccccgtc
     1441 tgtcgaaacc aaactctgga ttgtcatcgc cagtaccacc ctctttttca tgacccgcac
     1501 ctacaaatac agtttctcca ccttcttcat taccattcaa gccctgacca gcctctccct
     1561 cgcaggtttg gacgtatacg ccgccatgcc cgtgcgcatc atcgacacca ttatcggcgc
     1621 atcccttgcc tgggcggcgg tcagctacct atggccagac tggaaatacc tcacgctcga
     1681 acgcaccgcc gcccttgccg tatgcagcaa cggtgcctat ctcgaaaaaa tcaccgaacg
     1741 cctcaaaagc ggcgaaaccg gcgacgacgt cgaataccgc gccacccacc gccgcgccca
     1801 cgaacacacc gccgccctca gcagcaccct ttccgacatg agcagcgaac ccgcaaaatt
     1861 cgccgacagc ctgcaacccg gctttaccct gctcaaaacc ggctacgccc tgaccggcta
     1921 catctccgcc ctcggcgcat accgcagcga aatgcacgaa gaatgcagcc ccgactttac
     1981 cgcacagttc cacctcgccg ccgaacacac cgcccacatc ttccaacacc tgcccgaaac
     2041 cgaacccgac gactttcaga cagcactgga tacactgcgc ggcgaactcg acaccctccg
     2101 cacccacagc agcggaacac aaagccacat cctcctccaa cagctccaac tcatcgcccg
     2161 acagctcgaa ccctactacc gcgcctaccg ccaaattccg cacaggcagc cccaaaacgc
     2221 cgcctgaaaa agtttcggca ttttgtaaga gagagcagat tgtcagacag gttgcaagat
     2281 agtggataaa gctttgcgca gggtaaatgc gtagcaactg aaccgtcatt cccacgaatc
     2341 tacattccgt cattcccacg aaaacagaaa accaaaaaca gaaacctaaa atcccgtcat
     2401 tcccacgaac ctacattccg tcattcccac gaaaacagaa aaccaaaaac agaaacctaa
     2461 aatcccgtca ttcccacgaa cctg
//
LOCUS       DAWITQ010000207         2465 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.207, whole genome shotgun sequence.
ACCESSION   DAWITQ010000207 DAWITQ010000000
VERSION     DAWITQ010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2465)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2465)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2465
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.207"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            633..>2465
                     /locus_tag="WIX18_002022"
     CDS             633..>2465
                     /locus_tag="WIX18_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly/adherence protein PilC"
                     /protein_id="HEZ5239066.1"
                     /translation="MNEGNQLEVKRNGQYSTIKDKDREREYTHHNHRQGGGSVSFNNS
                     DELVSRQSGTAVFGTATYLPPYGKVSDFDADGLKERTNALNWIHTTHPGLIGYSYADV
                     VCRSNAGCPKLVYKTQFSFDNPDLAKTGGVLDRHTEPSRDNSPIYKLKDHPWLGVSFN
                     LGAEGTAKNGKVTNKLVSSFDEKNSNNNLVYTTEGGDISLGNRHRETTAMAYYLNAKL
                     HLLDKKQIQNITDKTVQLGVLKPSIDVRQGNKGIAGILAFHAKWDIKDTGQIPVKLKL
                     PQVKAGRCINKPNPNPNKKDLSPALTAPALWFGPVQNGKVQMYSASVSTYPDSSSSQI
                     FLQNLSRKDDTSKPGRYSLKPLSTSEIKSKEPSFAGRQTVIRLDGVVQQIKLSRNNDE
                     VVNFNVNNGKNDTFGIVSEGSFMPDTSEWKKVLLPWTVRASNDDGRFNTVNKEKNNGK
                     PKYSQKYRSRDNNNRDLGDIVNSPIVAVGGYLATSANDGMVHIFKKNGGSDERSYNLK
                     LSYIPGTMPRKDIENKDSTLAKELRAFAEKGYVGDRYGVDGGFVLRQVNNLNGQDRVF
                     MFGAMGFGGRGAYALDLTKIDSNNLTGVSMFDVQNDKNNNKNDNN"
BASE COUNT          687 a          634 c          641 g          503 t
ORIGIN      
        1 ccattgccgc gcaggcggca atggcgggcc tgccggcggg caaacttgcc ggataaaacg
       61 gtttttttga gattttacgt tccggattcc cgctttcgcg gcaatggcgg gccaaggagg
      121 cggttgcgga ttgccgaaaa ccgctttacc atgatcagcg cgcaagggta gaataatgcg
      181 gtaaccctat acattgcatc cggccaaagg ggcgtgttac ttttccgaac atcccccttt
      241 ggcagccggg ccaaaggggt tttccaaccg gcaattcggc gggcgcggaa tcgggcggtt
      301 tgccgaatcc cgccgtttgc ggcgcgcctg ccgccgacgg tatcccgcga agcaagattt
      361 aagggataaa atatgttcca acacgcaggg cggcacataa ggcgccgccc tgattcggaa
      421 gggcttgcac ccctcccgga caaagcctga tcctgccgcc ccgaaggacg gatgcccgaa
      481 gggcgggggg tttgaccgaa aaggaaatac gatgaataaa actttaaaaa ggcgggtttt
      541 ccgccatacc gcgctttatg ccgccatctt gatgttttcc cataccggcg gggggggggg
      601 cgatggcgca aaccagtaaa tacgctatta tcatgaacga gggaaaccag ctcgaggtaa
      661 agcggaatgg gcaatattca acaataaagg acaaagacag ggagcgcgaa tatactcatc
      721 ataatcaccg acaaggagga ggctctgtct cattcaacaa tagcgatgag cttgtttctc
      781 gacaaagcgg tactgccgtt tttggcacag ccacctacct gccgccctac ggcaaggttt
      841 ccgattttga tgccgacggg ctgaaagagc gcaccaatgc ccttaattgg attcatacga
      901 cccacccagg gttgataggc tacagctacg ccgatgtcgt atgcagaagc aacgcaggct
      961 gtcccaaact tgtctataaa acccaatttt ccttcgataa tcccgacttg gcaaaaacag
     1021 gaggcgtgct ggataggcac acagagccaa gccgcgacaa ttcgcccatt tacaaattga
     1081 aggatcatcc atggttgggc gtgtctttca atttgggcgc cgagggtacc gccaaaaatg
     1141 gtaaggtaac caacaaattg gtatcttctt ttgatgaaaa gaatagtaat aacaacctcg
     1201 tctataccac ggaaggcggc gatatttcct tgggcaacag gcatcgcgaa acgaccgcca
     1261 tggcctatta tctgaacgcc aagctgcacc tgctggataa aaaacagatt caaaatatca
     1321 ccgacaaaac agtgcagttg ggtgtcttga agccgagcat cgatgtgcgg caaggaaata
     1381 aggggattgc cggcattcta gcttttcatg ctaagtggga cattaaagat accgggcaga
     1441 ttccagtcaa gctcaaattg ccgcaagtca aagcaggccg ctgcatcaat aaaccgaacc
     1501 ccaatcccaa caaaaaagac ctttcgccgg cactgactgc ccccgcgctg tggttcggac
     1561 ctgtgcaaaa tggcaaggtg cagatgtatt ccgcttcggt ttctacctac cccgatagtt
     1621 cgagcagcca aattttcctg caaaaccttt cccgcaagga tgacacaagc aaaccgggcc
     1681 gctattccct caaacccttg agtacgtcgg agattaaaag taaagagccg agtttcgcag
     1741 ggcggcaaac cgtcatccga ttggatggcg tcgtgcagca gatcaaactg agtagaaaca
     1801 atgatgaggt cgtcaatttt aatgtaaaca acggcaaaaa cgacactttc ggcattgtta
     1861 gcgaagggag cttcatgcct gataccagcg agtggaaaaa agtattgctg ccttggacgg
     1921 ttcgtgcttc caatgatgac ggtcgattta acacagtcaa caaagaaaaa aacaacggca
     1981 agccaaaata cagtcaaaaa taccgcagcc gcgacaacaa caatcgcgat ttgggcgaca
     2041 tcgtcaacag ccccatcgtg gcggtcggcg ggtatttggc aacttctgcc aacgacggga
     2101 tggtgcatat cttcaaaaaa aacggcggca gtgatgaacg cagctacaat ctgaagctca
     2161 gctacatccc cggcacgatg ccgcgcaagg atattgaaaa caaagactcc accctcgcca
     2221 aagagctgcg cgcctttgcc gaaaaaggct atgtgggcga ccgctacggc gtggacggcg
     2281 gctttgtctt gcgccaagtt aacaacttaa atgggcaaga ccgcgtgttt atgttcggcg
     2341 cgatgggctt tggcggcaga ggcgcatacg ccttggattt gaccaaaatc gacagcaata
     2401 acctgaccgg cgtttccatg tttgatgtcc aaaacgacaa aaataacaat aagaatgaca
     2461 ataat
//
LOCUS       DAWITQ010000208         2455 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.208, whole genome shotgun sequence.
ACCESSION   DAWITQ010000208 DAWITQ010000000
VERSION     DAWITQ010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2455)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2455)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2455
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.208"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(120..1571)
                     /locus_tag="WIX18_002023"
     CDS             complement(120..1571)
                     /locus_tag="WIX18_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HEZ5239067.1"
                     /translation="MLSFLSGLLSLGIEVLWVRMFSFAAQSVPQAFSFTLACFLTGIA
                     VGAYFGKRICRSRFVDIPFIGQCFLWAGIADFLILGAAWLLTGFSGFVHHAGIFITLS
                     AVVRGLIFPLVHHVGTDGNKSGRQVSNVYFANVAGSALGPVLIGFVILDFLSTQQIYL
                     LICLISAAVPLFCTLFQKSLRLNAVSVAVSLMFGILMFLLPDSVFQNIADRPDRLIEN
                     KHGIVAVYHRDGDKVVYGANVYDGAYNTDVFNSVNGIERAYLLPSLKSGIRRIFVVGL
                     STGSWARVLSAIPEMQSMIVAEINPAYRSLIADEPQIAPLLQDKRVEIVLDDGRKWLR
                     RHPDEKFDLILMNTTWYWRAYSTNLLSAEFLKQVQSHLTPDGIVMFNTTHSPHAFATA
                     VHSIPYAYRYGHMVVGSATPVVFPNKELLKQRLSRLIWPESGRHVFDSSTVDAAAQKV
                     VSRMLIQMTEPSAGAEVITDDNMIVEYKYGRGI"
     gene            complement(1594..2214)
                     /locus_tag="WIX18_002024"
     CDS             complement(1594..2214)
                     /locus_tag="WIX18_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HEZ5239068.1"
                     /translation="MNSTASKTLKGLSLVFFASGFCALIYQVSWQRLLFSHIGIDLSS
                     ITVIISVFMVGLGVGAYFGGRIADRFPSSIIPLFCIAEVSIGLFGLVSRGLISGLGHL
                     LVEADLPIIAAANFLLLLLPTFMMGATLPLLTCFFNRKIHNVGESIGTLYFFNTLGAA
                     LGSLAAAEFFYVFFTLSQTIALTACFNLLIAASVWLRYRKDGYSEH"
BASE COUNT          770 a          580 c          572 g          533 t
ORIGIN      
        1 aggaataaga attcgggaca aaatgtttaa accattttgt cccgactgct gtgatgcggt
       61 ttttttgaac tagcaggacg ttacctaaaa cctgcgttgc ctgaaaccct ttaagacggt
      121 taaatccctc tgccgtattt gtattctaca atcatattat cgtcggtaat gacttccgcc
      181 ccagccgaag gttccgtcat ctgaatcagc atacgagaga caaccttttg tgctgcagca
      241 tccacggtgc tgctgtcaaa tacgtgcctg ccgctttccg gccaaatcaa ccgggagaga
      301 cgttgcttga gcagttcttt attagggaaa actaccgggg ttgccgagcc gactaccata
      361 tgcccatagc ggtatgcata gggaatactg tgtacggcgg tagcaaaagc atgcgggctg
      421 tgcgtggtat taaacattac aataccatcc ggggtaaggt ggctttgcac ctgttttaaa
      481 aattccgcac tcaacaggtt ggtggaatag gcacgccagt accaagtcgt attcatcaaa
      541 atcaggtcga atttttcatc aggatggcga cgcagccatt tcctaccgtc atccaataca
      601 atttcaacac gtttgtcctg caaaagcggg gcgatttgcg gctcgtccgc gataaggcta
      661 cggtatgccg gattgatttc cgcaacaatc atcgactgca tttccggaat ggcagacaag
      721 acgcgcgccc acgaacctgt actcaatcca acgacgaaaa tgcggcgtat gccagacttc
      781 agggagggta gcagataggc acgttcgatg ccgttgacac tattgaatac atcggtattg
      841 tatgcgccgt cgtatacatt cgccccataa acaaccttat caccatctct atggtaaacc
      901 gcaacaatgc cgtgtttgtt ttcaatcagc ctatccggac ggtcagcaat attttgaaag
      961 acagaatccg gcagtaggaa catgaggatg ccgaacatta gggaaactgc taccgacact
     1021 gcattcagtc ggagactttt ttggaacagt gtacaaaaca aagggacagc agcagaaatc
     1081 aaacagatga gcaggtaaat ctgttgggtg gacaagaaat caagtatcac aaagccgata
     1141 aggaccggac ccaatgcact gccggcaacg ttggcgaaat aaacattgga aacctgtcgt
     1201 ccggatttgt tgccatccgt acccacatgg tgtacgagcg ggaaaatcaa ccctctgacg
     1261 acggcagaca gggtaatgaa gataccggcg tggtggacga agccggaaaa acccgtcaac
     1321 aaccacgcag cacccaaaat caaaaagtcg gcaatacccg cccacaagaa gcactgcccg
     1381 ataaagggaa tatcaacaaa gcggctgcgg caaatccgtt tgccaaaata cgcgccgacg
     1441 gcgataccgg tcagaaaaca ggcaagagta aatgaaaatg cctgaggcac ggactgtgct
     1501 gcgaacgaaa acatccttac ccacaagact tctataccca agctcaataa gccgctaagg
     1561 aaagaaagca tataaatcaa actagtattc ggtttagtgt tcactatatc catcctttct
     1621 gtaacgcagc catactgaag cagcaatcag aaggttaaag caggctgtca gcgcaatggt
     1681 ttgggagagg gtaaaaaaga cgtagaaaaa ttcggcggcg gcaagcgatc cgagtgccgc
     1741 acccaaagtg ttgaaaaaat ataaggtacc gatagactcg ccaacattat gtattttccg
     1801 gttaaaaaaa caggtcagca agggcaaggt cgcgcccatc ataaaggtag gaagcagcaa
     1861 taagaggaaa ttggcagcag cgatgatggg caaatcagcc tcaactaaaa gatgccccaa
     1921 gccggaaatc agacccctgc ttaccaaacc gaacagaccg atggatactt cagcgatgca
     1981 aaacaggggg atgatacttg aaggaaaacg gtcagcaatg cgtccaccga aatacgcacc
     2041 tacacccaag ccgaccataa atacagaaat aatgacagta atcgaactca aatcgatacc
     2101 tatgtgactg aatagaagcc tctgccagct gacctggtaa atcagggcgc agaatccaga
     2161 ggcgaaaaac accagcgaca atcctttcag ggttttactt gcggtcgaat tcatattttc
     2221 tattttcaaa taggcggaac tataaatgaa atgtatcaat gtgtaaacat ttgtattaac
     2281 cgtaggaaat caccgtattg ctcaaactgc aggccgggaa aataaactcg taagcccgca
     2341 aacggcgtat cactgttcaa actgctgtgc ggcttcacgg tgttataaaa ataatggggc
     2401 tgtcctggac aactaagata aactcgattt tactaattgt tttaaaatgg aaatt
//
LOCUS       DAWITQ010000209         2432 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.209, whole genome shotgun sequence.
ACCESSION   DAWITQ010000209 DAWITQ010000000
VERSION     DAWITQ010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2432)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2432)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2432
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.209"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            35..1390
                     /locus_tag="WIX18_002025"
     CDS             35..1390
                     /locus_tag="WIX18_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC45 family MFS transporter"
                     /protein_id="HEZ5239069.1"
                     /translation="MSEYTPQTAKQGLPALAKSTIWMLSFGFLGVQTAFTLQSSQMSR
                     IFQTLGADPHNLGWFFILPPLAGMLVQPIVGHYSDRTWKPRLGGRRLPYLLYGTLIAV
                     IVMILMPNSGSFGFGYASLAALSFGALMIALLDVSSNMAMQPFKMMVGDMVNEEQKSY
                     AYGIQSFLANTGAVVAAILPFVFAYIGLANTAEKGVVPQTVVVAFYVGAALLIITSAF
                     TIFKVKEYDPETYARYHGIDVAANQEKANWFELLKTAPKAFWTVTLVQFFCWFAFQYM
                     WTYSAGAIAENVWHTTDASSVGYQEAGNWYGVLAAVQSVAAVICSFVLAKVPNKYHKA
                     GYFGCLALGALGFFSVFFIGNQYALVLSYTLIGIAWAGIITYPLTIVTNALSGKHMGT
                     YLGLFNGSICMPQIVASLLSFVLFPMLGGLQATMFLVGGVVLLLGAFSVFLIKETHGG
                     V"
     gene            1394..2404
                     /locus_tag="WIX18_002026"
     CDS             1394..2404
                     /locus_tag="WIX18_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose mutarotase"
                     /protein_id="HEZ5239070.1"
                     /translation="MSDTPATRDFGLIDGRAVTGYVLSNRRGTRVCVLDLGGIVQEFS
                     VLADGVRENLVVSFDDAASYADNPFQINKQIGRVAGRIRGAAFDINGRTYRVEANEGR
                     NALHGGSHGLAVTRFNAVAADGRSVVLRSRLQQSADGYPNDLDLDISYRLDEDNRLTV
                     SYRATALGDTVFDPTLHIYWRLDAGLHDAVLHIPQGGHIPADAEKLPVSTVSDDLEVF
                     DFSRPKPLDAAVAALRRETGRAGFDDAYRVPSDIGRPAAVLQAGRRRRISIYSDRNGL
                     VIFTAAPQDFARHDAGVYDALATEAQTLPDSLHWPEFGNIRLNKGDTREATIAYGIES
                     LS"
BASE COUNT          454 a          663 c          725 g          590 t
ORIGIN      
        1 actatacttt tcaaatcaaa aaaggattta ccttatgtcg gaatatacgc ctcaaacagc
       61 aaaacaaggt ttgcccgcgc tggcaaaaag cacgatttgg atgctcagtt tcggctttct
      121 cggcgttcag acggccttta ccctgcaaag ctcgcaaatg agccgcattt ttcaaacgct
      181 aggcgcagac ccgcacaatt tgggctggtt tttcatcctg ccgccgctgg cggggatgct
      241 ggtgcagccg attgtcggcc attactccga ccgcacttgg aagccgcgtt tgggcggccg
      301 ccgtctgccg tatctgcttt atggcacgct gattgcggtt attgtgatga ttttgatgcc
      361 gaactcgggc agcttcggtt tcggctatgc gtcgctggcg gctttgtcgt tcggtgcgct
      421 gatgattgcg ctgttggacg tgtcgtcaaa tatggcgatg cagccgttta agatgatggt
      481 cggcgacatg gtcaacgagg agcagaaaag ctacgcctac gggattcaaa gtttcttagc
      541 gaatacgggc gcggtcgtgg cggcgattct gccgtttgtg ttcgcgtata tcggtttggc
      601 gaacaccgcc gagaaaggcg ttgtgccaca aaccgtggtc gtagcattct atgtgggcgc
      661 ggcattactg attattacca gtgcgttcac aatcttcaaa gtcaaagaat acgacccgga
      721 aacctatgcc cgttaccacg gcatcgatgt cgccgcgaat caggaaaaag ccaactggtt
      781 cgaactctta aaaacggcac ctaaagcgtt ttggacggtt actctggtac agtttttctg
      841 ctggttcgcc ttccaatata tgtggactta ctcggcaggc gcgattgcgg aaaacgtctg
      901 gcacaccact gatgcgtctt ccgtaggtta tcaggaggcg ggcaactggt acggcgtttt
      961 ggcggcggtg cagtcggttg cggcggtgat ttgttcgttt gtattggcga aagtgccgaa
     1021 taaataccat aaggcgggtt atttcggctg tttggctttg ggcgcgctcg gctttttctc
     1081 cgttttcttc atcggcaacc aatacgcgct ggtgttgtct tataccttaa tcggcatcgc
     1141 ttgggcgggc attatcactt atccgctgac gattgtaacc aacgccttgt cgggcaagca
     1201 tatgggcact tacttgggcc tgtttaacgg ctctatctgt atgccgcaaa tcgtcgcttc
     1261 gctgttgagt ttcgtgcttt tccctatgct gggcggcttg caggccacta tgttcttggt
     1321 agggggcgtc gtcctgctgc tgggcgcgtt ttccgtgttc ctgattaaag aaacacacgg
     1381 cggggtttga gcgatgagcg atacccccgc tacccgcgat ttcggcctga tcgacgggcg
     1441 tgccgtaacc ggctatgtgc tgtccaaccg gcgtggtacg cgtgtctgcg tgctggactt
     1501 gggcgggatt gtgcaggaat tttccgtttt ggcagacggc gtgcgcgaaa acctcgtggt
     1561 gtcgttcgac gatgcggctt cctatgcgga caatccgttt cagattaaca agcagatagg
     1621 gcgcgtggcc ggacgcatcc gcggtgcggc gttcgacatc aacggcagga cttaccgcgt
     1681 ggaggccaac gaaggcagga acgcgctgca cggcggttcg cacgggctgg ccgttacccg
     1741 tttcaacgcg gtggcggcag acggccgttc ggtggtgctg cgcagccgcc tgcaacagtc
     1801 ggccgacggt tatcccaacg atttggattt ggatatttcc taccgcttgg acgaggacaa
     1861 ccggcttacc gttagctatc gcgccaccgc gctcggcgac acggtgttcg acccgacgct
     1921 gcacatttac tggcggctgg acgcgggcct gcacgatgcg gttctgcata ttccgcaggg
     1981 cggacatatt ccggccgatg ccgaaaaact gcccgtctca acggtttcag acgacctcga
     2041 agtatttgat ttcagccggc ccaagccgct ggatgccgcc gttgccgccc tgcgccgcga
     2101 aacgggccgg gccggttttg acgacgctta ccgcgtgccg tccgatatag gccgtcccgc
     2161 cgctgtgttg caagccggac gccgccgtcg tatcagcata tacagcgacc gcaacggctt
     2221 ggtcatcttt accgccgccc cgcaggattt cgcgcggcac gatgcgggcg tttacgacgc
     2281 gctggcgacc gaggcgcaga cgctgcccga cagcctgcat tggcccgagt tcggcaatat
     2341 tcgtctgaac aagggtgata ccagggaggc gacgattgct tacggcatcg aatccctttc
     2401 ttaggagctt cctaacaccg gttgcagacg gc
//
LOCUS       DAWITQ010000210         2423 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.210, whole genome shotgun sequence.
ACCESSION   DAWITQ010000210 DAWITQ010000000
VERSION     DAWITQ010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2423)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2423)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2423
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.210"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            128..2341
                     /locus_tag="WIX18_002027"
     CDS             128..2341
                     /locus_tag="WIX18_002027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEZ5239071.1"
                     /translation="MTAISPIQDTQSATLQELREWFDSYCAALPNNDKKLVLAARSLA
                     EAHYPADAATPYGEPLPDHFLGAAQMVHELDLLPDAVAATLLADIGRYVPDWNLLVSE
                     RCNSTVAELVKGVDEVQKLTHFARVDSLATPEERAQQAETMRKMLLAMVTDIRVVLIK
                     LAMRTRTLQFLSNAPDSPEKRAVAKETLDIFAPLANRLGVWQLKWQLEDLGFRHQEPE
                     KYREIALLLDEKRTERLEYIENFLNILRTELKKYNIHFEVAGRPKHIYSIYKKMVKKK
                     LSFDGLFDIRAVRILVDTVPECYTTLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTV
                     IVGPEDKGVEVQIRTFDMHQFNEFGVAAHWRYKEGGKGDSAYEQKIAWLRQLLDWREN
                     MAESGKEDLAAAFKTELFNDTIYVLTPHGKVLSLPTGATPIDFAYALHSSIGDRCRGA
                     KVEGQIVPLSTPLENGQRVEIITAKEGHPSVNWLYEGWVKSNKAIGKIRAYIRQQNAD
                     TVREEGRVQLDKQLAKLTPKPNLQELAENLGYKKPEDLYTAVGQGEISNRAIQKACGT
                     LNEPPPVPVSETTIVKQSKIKKGGKNGVLIDGEDGLMTTLAKCCKPAPPDDIVGFVTR
                     DRGISVHRKTCPSFRHLAEHAPEKVLDASWAALQEGQVFAVDIEIRAQDRSGLLRDVS
                     DALARHKLNVTAVQTQSRDLEASMRFTLEVKQVNDLPRVLASLGDVKGVLSVTRL"
BASE COUNT          633 a          769 c          582 g          439 t
ORIGIN      
        1 aggaaaaatc agaaaagttt tgcattttga aaatgagatt gagcataaaa ttttagtaac
       61 ctatgttatt gcaaaggtct caagctgtta caataaactc gtttttatcg gaacggaaga
      121 ccccatcatg accgccatca gcccgattca agacacgcaa agcgcgactc tgcaagaatt
      181 gcgcgaatgg ttcgacagct actgcgccgc gctgccgaac aacgataaaa aacttgtctt
      241 agccgcccgt tcgctggcgg aagcacatta ccccgccgat gccgccacgc cgtatggcga
      301 gccgctgccc gaccacttcc tcggcgcggc gcaaatggtt catgaactcg acctgctccc
      361 cgatgccgtc gccgccaccc tgcttgccga catcggacgc tacgtccccg actggaacct
      421 attggtttcc gaacgctgca acagtaccgt cgccgagctg gtcaaaggtg tggacgaagt
      481 gcagaaactc acccacttcg cccgggtgga cagcctcgcc acaccggaag aacgcgccca
      541 gcaggcagaa actatgcgga aaatgctgct ggcgatggtt accgacatcc gcgtcgtgtt
      601 aatcaaactg gcgatgcgta cgcgcaccct gcaattttta agcaacgccc ccgacagccc
      661 cgaaaaacgc gccgtcgcca aagaaaccct cgacatcttc gccccgctcg ccaaccgttt
      721 gggcgtgtgg cagctcaaat ggcagctcga agatttgggc ttccgccatc aagagcccga
      781 aaaataccgc gaaattgccc tgcttttgga cgaaaaacgt accgaacgcc tcgaatacat
      841 cgaaaacttc cttaatatcc tgcgtacgga actcaaaaaa tacaatatcc actttgaagt
      901 cgccggccgt ccgaaacaca tctactccat ttacaaaaaa atggtgaaga aaaaactcag
      961 cttcgacggg ttgttcgaca tccgcgccgt gcggattctg gttgataccg tccccgagtg
     1021 ttacaccaca ctgggcattg tccacagcct ctggcagccc attcccggcg agttcgacga
     1081 ctacatcgcc aacccgaaag gcaacggcta taaaagtttg cacaccgtca tcgtcggccc
     1141 ggaagacaaa ggcgtggaag tgcaaatccg caccttcgat atgcaccaat tcaacgaatt
     1201 cggtgtcgcc gcgcactggc gttacaaaga gggcggcaaa ggcgattccg cctacgaaca
     1261 aaaaatcgcc tggttacgcc aacttttgga ctggcgcgaa aacatggcgg aaagcggcaa
     1321 ggaagacctc gccgccgcct tcaaaaccga gcttttcaac gacacgattt atgttttgac
     1381 cccgcacggc aaagtcctct ccctgcccac aggcgcgacc cccatcgact tcgcctacgc
     1441 cctgcacagc agcatcggcg accgttgccg cggtgcgaaa gtcgaagggc agattgtgcc
     1501 gctgtccacc ccgctcgaaa acggacagcg tgtcgaaatc attaccgcca aagaagggca
     1561 tccttccgtc aactggcttt acgaaggctg ggtcaaatcc aacaaggcaa tcggcaaaat
     1621 ccgcgcctac atccgccagc aaaacgccga caccgtgcgc gaagaaggcc gcgtccaact
     1681 cgacaaacag cttgccaaac tcacgcccaa acccaacctg caagagcttg ccgaaaatct
     1741 cggctacaaa aagccagaag acctctacac cgccgtcgga caaggcgaaa tttccaaccg
     1801 cgccatccaa aaagcctgcg gcacgctgaa cgaaccgccg cccgtacccg tcagcgaaac
     1861 caccatcgtc aaacagtcca aaatcaaaaa aggcggcaaa aacggcgtgc tcatcgacgg
     1921 cgaagacggt ctgatgacca cgcttgccaa atgctgcaaa cccgcgccgc ccgacgacat
     1981 tgtcggcttc gttacccgcg atcgcggcat ttcggtacac cgcaaaacct gcccctcttt
     2041 ccgacacctc gccgaacacg cgcccgaaaa agtactggac gcaagttggg cggcgttgca
     2101 ggaaggacaa gtgtttgccg tcgatatcga aatccgcgcc caagaccgct ccgggctttt
     2161 gcgcgacgta tccgacgcgc tcgcccgcca caaactcaac gttaccgccg tgcaaaccca
     2221 gtcccgcgac ttggaagcca gtatgcggtt cacgctcgaa gtcaaacagg tcaacgacct
     2281 cccgcgcgtc ctcgccagcc tcggcgacgt caaaggcgta ttgagcgtta cccggcttta
     2341 aatacaaaaa tgccgtctga aagccgaata acgcttcaga cggcattttg attgccgggg
     2401 tttgctattt tttgttgcat agt
//
LOCUS       DAWITQ010000211         2421 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.211, whole genome shotgun sequence.
ACCESSION   DAWITQ010000211 DAWITQ010000000
VERSION     DAWITQ010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2421)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2421)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2421
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.211"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            290..895
                     /locus_tag="WIX18_002028"
     CDS             290..895
                     /locus_tag="WIX18_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HEZ5239072.1"
                     /translation="MNTDFQNILKQLGKQAQKEAAEKQAAEKNKQKQEQDFDFSQAVG
                     QVSPLKNRQQYYAPPDKPPIKVRPKDNRADEENYFYIGSTYNDPPASFSKNGQGKNDI
                     QRLKNGYYPVVTDVDLHGYTQEEAQKVLNEFIAFTQKRGVCGEIIHGSGLGSKGYKPV
                     LKNMTRNWLMQHPDVLAYAEPREGNDGCVRILLKRKLRQQD"
     gene            958..1320
                     /gene="ssrA"
                     /locus_tag="WIX18_002029"
     tmRNA           958..1320
                     /gene="ssrA"
                     /locus_tag="WIX18_002029"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(1639..2388)
                     /locus_tag="WIX18_002030"
     CDS             complement(1639..2388)
                     /locus_tag="WIX18_002030"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HEZ5239073.1"
                     /translation="MPSVELLLVIVGLPRGTFYYQLAVQSAEDKYADLKRHIHDIYRR
                     HKGRYGYRRIAAAIRHAGTPVNHKKVSRLMAKTGLKAVIRRRKYRSFKGEVGKIAPNI
                     LRRCFHAEKPNEKWVTDVTEFNVGGEKIYLSPIMDLFNGEIVSYRIQTRPTFDLADEI
                     LKGAPEKPGSSEKPILHSDQGWQYQMFFYSGLNLNQDKAMKPQTVQIVRQGEATPYWF
                     KFNPLYNNDRIKLKLKGLSLVQYRIQSLKAA"
BASE COUNT          689 a          643 c          505 g          584 t
ORIGIN      
        1 tcagatttcc gtgtttcgcg tttccggcaa ttcaagattg gcaaaacacg tcagcctgct
       61 tcgcaaggca ggtttttaaa actttatcag gcgttcgggc atatcggttc gaccggtccg
      121 catttccggc aatcaacact gccgacggtt gccgcatttc tttttgatat acaatcacac
      181 tttcaaaaaa catacgcagg caacaaaatc atcctccccc gattggcaaa cattccggca
      241 aattaaaacc ccgcccgaaa cagccatcgg acaaataaca ggaaaaaata tgaataccga
      301 cttccaaaac atcctcaaac aactgggcaa acaagcccaa aaagaagcgg cagaaaaaca
      361 ggcagccgaa aaaaacaagc aaaaacaaga acaggatttc gatttttcac aagcagtcgg
      421 acaagtctcc ccattaaaaa accggcagca atattatgcg ccgcccgaca aaccccccat
      481 caaagtccgt cccaaagaca accgcgccga cgaagaaaac tacttctaca tcggcagcac
      541 atacaacgac ccgcccgcca gcttcagcaa aaacggacag ggaaaaaacg acatccaacg
      601 cctgaaaaac ggatactatc ccgtcgttac cgatgtcgac ctgcacggct acacacagga
      661 agaagcccaa aaagtcctca acgaattcat cgcattcacc caaaaacgcg gcgtatgcgg
      721 cgaaatcatc cacggcagcg gattaggttc caaaggctac aaacccgttc tgaaaaatat
      781 gacccgaaac tggctgatgc aacaccccga cgtactcgcc tacgccgaac cccgggaagg
      841 caacgacggc tgcgtccgca tcctgctcaa acgcaaatta aggcagcaag actgacaaat
      901 ttctccgaca gacttggcag caccgcacaa tatccgtata atttgcaaac catttctggg
      961 ggcgaccttg gtttcgacgg gggttgcgaa gcagatgcgg gcataccggg gtctcagatt
     1021 cccgtaaaac actgaattca aatagtcgca aacgacgaaa cttacgcttt agccgcttaa
     1081 ggctagccgt tgcagcagtc ggtcaatggg ctgtgtggcg aaagccaccg caacgtcatc
     1141 ttacattgac tggtttccta ccgggttact tggcaggaaa tgagatttaa ggtaactggt
     1201 ttccaaaagg cctgttggtc ggcatgatgg aaataagatt ttcaaataga cacaactaag
     1261 tatgtagaac gctttgtaga ggactttcgg acgggggttc gattcccccc gcctccacca
     1321 taccctattt tcagcagcat cctgcaacac aaaaaagcct tgaacttcaa cagtttcaag
     1381 gcttttttgt tgccttgaat atgctggcgt atgcttgagt tttcgccatt tatggggtaa
     1441 cttttggggt aacttttcac gaattacccc aaaaaacgcc ttaaaaatgc aaaagtcatc
     1501 acgcattttt ttaaaaaggt tacccaaaac ttaaatgtaa tcctttattt ataagcttgc
     1561 agctttccaa acaagttacc cccaaacgga taaaaaaatg ccgaagccga actgacccca
     1621 aaaagtcgga cagtttaatc aagcggcttt cagggactga attctgtact gaacaaggct
     1681 cagccctttt aatttcaact tgattctatc gttgttgtat agtggattaa atttaaacca
     1741 gtacggcgtt gcctcgcctt gccgtactat ttgtactgtc tgcggcttca tcgccttgtc
     1801 ctgatttaaa tttaatccac tataaaaaaa catctgatat tgccaacctt gatccgaatg
     1861 cagtatcggc ttttcagacg atcccggttt ctccggcgca cctttcagta tctcgtcggc
     1921 caaatcgaaa gtcgggcggg tttgaatacg gtaactgacg atttccccgt taaacaaatc
     1981 cataatcgga gaaaggtata tcttttctcc gcctacattg aactcggtaa cgtccgttac
     2041 ccatttctca ttcggctttt ctgcatggaa acagcgtcgc aggatattcg gcgcaatttt
     2101 gccgacttct cctttgaacg agcggtattt gcgccgccgt atcactgcct tcagccccgt
     2161 cttcgccatc agacggctga ctttcttgtg attgaccggt gttcctgcgt gacggatggc
     2221 tgccgcaatc ctccggtagc cgtatcttcc cttatgtcgt cgataaatat catggatatg
     2281 ccgtttcaaa tcggcatatt tgtcttctgc cgattggacg gccaattggt aatagaaggt
     2341 gccgcgtggc agtccgacaa tcaccaacag cagttcaacg gatggcattg ccttaaccct
     2401 gcgacgagtt gcgttctttc t
//
LOCUS       DAWITQ010000212         2378 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.212, whole genome shotgun sequence.
ACCESSION   DAWITQ010000212 DAWITQ010000000
VERSION     DAWITQ010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2378)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2378)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2378
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.212"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(383..793)
                     /locus_tag="WIX18_002031"
     CDS             complement(383..793)
                     /locus_tag="WIX18_002031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239074.1"
                     /translation="MKIYNLDNIITSSALSLYKSTWVKLDLISCAKFIIEGTDFTFDW
                     DEGIENWIVFFHKNKVIGYLCAKLPFAILDNEQLKNQLYHKYPHVLTLQIKNIETEKI
                     SLNVNICRLTLCPSFHDEHDTLVCSVQDFYVNTV"
     gene            complement(1381..1764)
                     /locus_tag="WIX18_002032"
     CDS             complement(1381..1764)
                     /locus_tag="WIX18_002032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239075.1"
                     /translation="MMTEPHGYPSNNLPVKIINDIIYATQLVEDLVLGKIKIVDFLKS
                     YNNFYYWLGFDELPQSEKIKFLNYLNILSIHKEIQDKTVNRVYTDCFDIDKLHSLGRI
                     TTNECINGIKKIYQKNKLEFDNILK"
     gene            complement(1730..>2378)
                     /gene="mafB"
                     /locus_tag="WIX18_002033"
     CDS             complement(1730..>2378)
                     /gene="mafB"
                     /locus_tag="WIX18_002033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
                     /protein_id="HEZ5239076.1"
                     /translation="QGIHNLGNLSPEAQLAAATALQDSAFAVKDSINSARQWADAHPN
                     ITATAQTALSVAEAATTVWGGKKVELNPTKWDWVKNTGYKKPAVRLMQTVDGEMAGGN
                     KPPKPSTQQHSTHSDNNIGLPAPYVKPDTSISPTGTIYVDSKGNAIPTPIGGYITGSP
                     DARFIQVRDSNGNLTGARIDDAHHANTHQDPRALTGHAHVPGVTNDDGTPWLPIK"
BASE COUNT          680 a          437 c          414 g          847 t
ORIGIN      
        1 ctctacggat ggggcagagt tacccgtatg attgccgtat ggtcggatac ttgtatccga
       61 caaaaatatt tgacgcgtct atcgtttccg aaatgccgct gttgaaaaat gtcggattcg
      121 agaatccgac ctacggttgc tgaacaatgt tttgtagaac ttgctcaaaa tccatgtttc
      181 gccattttcc tttatatata cctaatacag cacgggttac gatttcgttt aagtcataaa
      241 tagccattta cgtcctctgc taattttcag cgagtagatt gggttaccaa acccaacaaa
      301 aaagcagcct gaaaaatttc aggatgcttg ttttatgttt tttatcaatg aattaggttt
      361 taatccagcc tgcgcttgct agttaaacag tatttacata aaaatcttgt actgaacaaa
      421 caagcgtatc atgttcatca tgaaatgatg ggcataacgt taatctacaa atgtttacat
      481 ttaaagatat tttttcagtt tcaatatttt taatttgtaa ggttaataca tgaggatatt
      541 tgtgatatag ctgatttttt aattgttcgt tgtctaatat agcaaaaggt aattttgcac
      601 acaaataacc aataactttg tttttatgaa aaaaaactat ccaattttca attccttcat
      661 cccaatcaaa agtaaaatcc gttccttcta tgataaattt agcacaagat attaaatcta
      721 acttaaccca agtggattta tacagactca atgctgatga agttataata ttatctaaat
      781 tataaatttt cataaatcaa cgttccttac ctggtgttat atgcacaggt ctaatcccat
      841 ctttattcgg ctttctacga taaatgttaa ttatatgtgt cggttttccg tctgtatagc
      901 caactacgtc gttcgttgga acttttgcct tattttgact atcccataaa ttatgtttat
      961 ctgcatatct agcagcatct aatgtagctt tttccgcatc aacatctgat ttaaataaac
     1021 ttttgctatc tatcttgtct agactagatg catcaggttt gtgtcgtaaa aagcactgtc
     1081 ctgtaatagg ctcgcggcag caagttgtgc ttccggactt aattttccta aatcattaat
     1141 accttgtaaa gtttgctgcg cagagatgta ggtcggatat ttgtatccga caaaaatatt
     1201 tgacgcatct atcgtttccg aaatgccgct gttggaaaat gtcggattcg agaatctgac
     1261 ctacggctgc tgactatttt cttgtttata taattctaca actgcaaact actatcaaat
     1321 ctttttatct ctggctctac actcagcaag aatattttta ttttacaaaa cataggctag
     1381 ttatttgagt atattgtcaa attctaattt gtttttttga tagatttttt ttataccatt
     1441 aatacattca ttagttgtaa ttctaccaag cgaatgtaat ttatcaatat caaaacaatc
     1501 ggtataaacc ctattcacag ttttatcttg tatttcctta tgaatactta atatattgag
     1561 atagtttaga aattttattt tctcagattg aggtaactca tcaaaaccaa gccaataata
     1621 aaaattgtta tatgatttta aaaaatcaac aatttttatt tttcctaaaa ccaaatcttc
     1681 aactaactgg gttgcataaa taatatcatt tatgatttta acaggtaaat tatttgatgg
     1741 gtaaccatgg ggttccgtca tcatttgtaa ctcctggtac atgtgcgtgt cctgtaagtg
     1801 cgcgtgggtc ttgatgggta tttgcatgat gagcatcatc tattctggct ccagtcaagt
     1861 ttccattact atctcggact tggataaaac gagcatcagg cgaacctgtt atataaccgc
     1921 ctattggtgt tggtattgca tttcctttgc tgtctacata aattgttcct gtcggagaaa
     1981 tagatgtatc aggtttaaca tatggggcag gtaagcctat attgttatca gagtgtgtag
     2041 agtgttgctg cgtacttggt ttcggtggct tatttccccc agccatctcc ccatctacag
     2101 tctgcataag gcgaacagca ggttttttat agccggtatt tttaacccaa tcccatttgg
     2161 tcgggttaag ttctactttt ttaccgcccc aaaccgtagt tgcggcctct gctacggaaa
     2221 gggcagtttg ggcagtagct gtaatgttcg gatgggcatc agcccattgt ctggcagagt
     2281 tgatactgtc ttttaccgca aaagcactgt cttgtaatgc ggttgcggcc gcaagttgtg
     2341 cttccggact taaatttcct aaattgtgaa taccctgt
//
LOCUS       DAWITQ010000213         2309 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.213, whole genome shotgun sequence.
ACCESSION   DAWITQ010000213 DAWITQ010000000
VERSION     DAWITQ010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2309)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2309)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2309
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.213"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..567)
                     /locus_tag="WIX18_002034"
     CDS             complement(<1..567)
                     /locus_tag="WIX18_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HEZ5239077.1"
                     /translation="MEHKLPQLPYEPDALSPHLSKETLEFHYGKHHQTYITNLNNQIK
                     GTEFENLPLEEIVKKSSGGVFNNAAQTWNHTFYWLGFTPKGQGKPSGELAAAIDAKWG
                     SFEKFQEAFNACAAGTFGSGWAWLVKTPAGGLDLVSTSNAATPLTTENTPLLTCDVWE
                     HAYYIDYRNSRPNYLKGFWEIVNWDEVAK"
     gene            731..2137
                     /gene="dnaB"
                     /locus_tag="WIX18_002035"
     CDS             731..2137
                     /gene="dnaB"
                     /locus_tag="WIX18_002035"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HEZ5239078.1"
                     /translation="MNDYAAMPSEDREVGALSLPPHSMEAEQSVLGGLMLENPAWDRI
                     ADVVSGEDFYRHEHRLIFRSIAKLINESRPADVITVQEDLQRNEELEAAGGFEYLITL
                     AQNTPSAANIRRYAEIVRERSIMRQLAEVGTEIARSAYNPQGRDAGQLLDEAENKVFQ
                     IAESTAKSKQGFLEMPDLLKEVVQRIDMLYSRDNPDEVTGVPTGFIDLDKKTSGLQPG
                     DLIIVAGRPSMGKTAFSINIAEHVAVEGKLPVAVFSMEMGGAQLVMRMLGSVGRLDQS
                     VLKTGRLEDEHWGRLNEAVVKLSDAPVYIDETPGLTALELRARARRLARQFNNKLGLI
                     VIDYLQLMAGSGRSDNRASELGEISRSLKALAKELQVPIIALSQLSRTVESRTDKRPM
                     MSDLRESGAIEQDADLIMFMYRDEYYNQDSPMKGLAECIIGKHRNGPVGKIFLTWTGQ
                     FTKFDNAAYIPEEAKIED"
BASE COUNT          555 a          599 c          624 g          531 t
ORIGIN      
        1 tttggcgact tcgtcccagt tgacgatttc ccagaaacct ttcaggtagt tggggcggct
       61 gttgcggtag tcgatgtagt aggcgtgttc ccacacgtcg caggtcagca gcggcgtgtt
      121 ttcagtggtc agcggcgtag cggcgttgga agtggaaacc aaatccaatc cgccggcagg
      181 ggttttcacc agccatgccc aaccggagcc gaaagtaccg gccgcgcagg cattgaacgc
      241 ttcttggaat ttctcgaagc tgccccattt cgcgtcgatg gcggcggcca gttcgccgga
      301 aggtttgcct tgacctttgg gcgtgaaacc cagccagtag aaggtgtggt tccaagtttg
      361 tgccgcgttg ttgaacacgc cgcccgaaga ttttttcaca atctcttcca aaggcaggtt
      421 ttcaaattcg gtgcctttga tttgattgtt caggttggtg atgtaggttt gatggtgttt
      481 gccgtagtgg aattccaaag tctctttgct cagatgcggg gacaatgcgt ccggttcata
      541 aggcagttgc ggcagcttat gttccatttt gtgctcctaa tgttgttttt ggatgttgtg
      601 ttttggcagt gttgctgcaa acgaatcggc agcacacgca ttctacctgt tttgagggat
      661 ggaaaccaat tgaacctgct ttacgctata atagaagatt gcaatttcgg cacgacagat
      721 aggatgtacc atgaacgatt acgccgctat gccgtctgaa gaccgtgagg tcggcgcatt
      781 gtcgctgcct ccacattcga tggaggcgga acaatccgtt ttgggcggtt tgatgctgga
      841 aaatccggct tgggacagga ttgccgatgt ggtttccggt gaagacttct accgccacga
      901 acaccgcctg attttccgat ccattgctaa attaatcaat gagagccgtc ccgccgatgt
      961 gattacggtt caggaagatt tgcagcggaa cgaagaattg gaagcggcag gcggattcga
     1021 atatctgatt acgctggcgc aaaacacccc gtctgccgcc aacatccgcc gctacgccga
     1081 aatcgtgcgc gagcgttcca tcatgcgcca actcgccgaa gtggggacgg aaatcgcccg
     1141 cagcgcatac aatccgcaag gcagggacgc ggggcagctt ttggacgagg cggaaaacaa
     1201 agtattccaa atcgccgaaa gcaccgccaa atccaagcag ggctttttgg agatgcccga
     1261 tttgctgaaa gaagtcgtac agcgcatcga tatgctctac tcgcgcgaca atcccgatga
     1321 agttaccggc gtgccgacgg ggttcatcga cctcgacaaa aaaacctcgg gccttcagcc
     1381 cggcgacctg attattgttg ccggtcgtcc gtctatgggt aagaccgcct tttctatcaa
     1441 tatcgccgaa cacgttgccg tagaaggcaa gctgccggtt gccgtcttct caatggagat
     1501 gggcggggcg caactggtca tgcgtatgct cggctcggtc ggacggctgg atcaaagcgt
     1561 tttgaaaacc ggcaggctcg aagacgaaca ctggggtcgc ctgaacgaag cagtcgtcaa
     1621 actctccgac gcgcccgtgt acatcgacga gaccccgggt ctgaccgcgc tcgaactgcg
     1681 cgcccgtgcc cgccgtctcg cccgtcaatt taacaataag ctgggattaa tcgtcatcga
     1741 ctacctgcaa ctgatggcag gatccggccg ttccgacaac cgagcttcag agctgggcga
     1801 aatttcacgt tcgctcaaag cgttggcgaa agaattgcaa gtccccatca tcgccctgtc
     1861 gcaattgagc cgtaccgtcg aatcgcgtac cgacaaacgc ccgatgatgt ccgacctccg
     1921 cgaatccggt gctatcgagc aagatgccga cctgattatg ttcatgtacc gcgacgaata
     1981 ctacaaccag gactcaccca tgaaaggcct tgccgaatgt atcatcggca aacaccgcaa
     2041 cggtcccgtc ggtaaaatct tcctcacatg gacggggcaa ttcaccaaat tcgacaatgc
     2101 tgcctatatt cccgaggagg caaagataga ggattaaatg gctatataaa aatttattag
     2161 gcgaaatcag gcaaaatcgt ttaaaatcat gcttagagat tgccctaaaa aataaaacgc
     2221 ggtcttgagg catttttgca ttcagcccgc atataattga aaatatagtg gattaacaaa
     2281 aatcaggaca aggcaacgaa gccgcagac
//
LOCUS       DAWITQ010000214         2307 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.214, whole genome shotgun sequence.
ACCESSION   DAWITQ010000214 DAWITQ010000000
VERSION     DAWITQ010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2307)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2307)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2307
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.214"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(53..1462)
                     /gene="dacB"
                     /locus_tag="WIX18_002036"
     CDS             complement(53..1462)
                     /gene="dacB"
                     /locus_tag="WIX18_002036"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HEZ5239079.1"
                     /translation="MNFPKTAASLLLLLASLAAHALDTGRIPQNEIAVYVQELDSGKV
                     IIDHRSDVPVNPASTMKLVTAFAAFKTFGSNYRWATEFKSNGTVNDGTLDGNLYWAGS
                     GDPVFNQENLLAVQRQLREQGIRNITGHLMLDHSLWGEVGSPDDFEADSGSPFMTPPN
                     PTMLSAGMVMVRAERNAADSTDILTDPPLSHIFAQNNLKITASQAACPSIKKLMRASF
                     SDNTLKLRGNIPESCLGKPVGVRMFALDELIRQSFTNHWLLGGGRISDGIGIADTPEG
                     AQTLAVAHAKPMKEILTDMNKRSDNLIARSVFLKLGGNGKLPAVSEQAASAVRRELAV
                     SGIDVADLVLENGSGLSRKERVTARMMAQMLETAYFSPFAQDFIDTLPIAGTDGTLRN
                     RFKQSGGLLRLKTGTLNNVRALAGYWLGDKPMAVVVIINSGRAVSLLPDLDNFVANNI
                     ISGGDGWLDAKLMCKERRA"
     gene            1627..2193
                     /locus_tag="WIX18_002037"
     CDS             1627..2193
                     /locus_tag="WIX18_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEZ5239080.1"
                     /translation="MAKKISILVGSLRRASFARKVALNAAEMFPEGWQAEIVEIGHLP
                     LYNFDYDDPAVEDVPLPESYTAFRETIKASDGILFVTSENNRTIPACLKNAVDIGSKP
                     NADVAWKNKPAGIISHSVGKMGGYSSQKNLRLALSYFDMPVTGQPEVFLGNSPTLFDE
                     NGKLIDSARDFVQSYINQFVGLIERNAK"
BASE COUNT          531 a          563 c          658 g          555 t
ORIGIN      
        1 tcctagttat ctaggacagc cccttaaatt taatccacta tattttcctg tttcaggctc
       61 ggcgttcttt gcacatcagt ttcgcatcca gccagccatc gccgccggag atgatgttgt
      121 tggcaacgaa gttgtccaag tcgggcagca gggaaacggc gcggccgctg ttgatgatga
      181 cgaccaccgc catcggtttg tcgcccagcc aataacctgc aagggcgcgg acattgttga
      241 gcgtgccggt ttttaagcgc aacagcccgc cgctttgttt gaagcggttg cgtaaagtcc
      301 cgtctgtgcc ggcgatgggc agcgtatcga tgaaatcttg tgcaaacggg ctgaaataag
      361 ccgtttccaa catttgcgcc atcattctcg ccgttaccct ttcttttcta gacagacctg
      421 aaccgttttc caaaaccaaa tccgcaacat cgatgcccga cacggcaagt tcacgccgga
      481 cggcagacgc tgcctgttcg gaaacggcgg gcagtttgcc gttgccgccg agtttgagga
      541 agacggaacg cgcaattaga ttgtccgaac gcttgttcat gtccgtcaaa atttccttca
      601 tcggtttggc gtgtgcaacg gcaagcgtct gcgcgccttc cggcgtgtcg gctatgccga
      661 taccgtctga aatccgtccg ccgccgagca gccagtggtt ggtaaaactt tgccggatca
      721 gttcgtcaag cgcgaacatc cggacaccga caggcttgcc caaacagctc tcgggaatat
      781 tgccgcgcaa tttcagcgta ttgtccgaaa aagatgcacg catcagtttt ttgatcgaag
      841 ggcaggcagc ttgggaggcg gtaattttca agttgttttg ggcgaaaata tgcgacaaag
      901 gcggatcggt gaggatgtcg gtactgtcgg cggcattgcg ttcggcgcgc accataacca
      961 taccggcaga cagcatagtt ggattggggg gcgtcataaa cggcgaaccg ctgtcggctt
     1021 cgaaatcgtc ggggctgccg acttcgcccc acaggctgtg gtcgagcatc aggtgtcccg
     1081 tgatattgcg tatgccttgt tcgcgcaact ggcgttggac ggcaagcagg ttttcctgat
     1141 tgaaaacggg gtcgccgctg cccgcccaat acaggtttcc gtcaagcgtg ccgtcgttta
     1201 ccgtaccgtt gcttttaaac tcggtcgccc agcggtaatt gctgccgaag gttttgaagg
     1261 cggcaaacgc ggtaacgagt ttcattgtgg aggcggggtt gacggggaca tccgagcggt
     1321 ggtcaatgat gacttttccg ctgtcaagct cttggacata tacggcgatt tcgttttgcg
     1381 gaatgcgacc cgtatcgagc gcgtgtgcgg cgagggaggc gagaagcagc agcagggagg
     1441 ccgctgtttt ggggaaattc ataggtaaat ctgttacata aaaaaagcaa ttataaggca
     1501 aagccggata agtgggaacg ctgtggcggc gggccggctt gtttgcaggg gaaatcacat
     1561 atataataat cgctatcatt atgaaatgat tgagacgcac aaacttaata ttcaggagga
     1621 atgattatgg ctaagaaaat cagtattttg gtgggcagcc tgcgccgtgc ttcttttgcg
     1681 cgcaaagtgg cattgaatgc ggcggagatg ttccccgaag gctggcaggc ggaaatcgtc
     1741 gaaatcggac atctgccgct ttacaatttc gattatgacg accctgcggt ggaagatgtg
     1801 ccgctgcccg aaagctacac ggctttccgc gaaacgatta aggcttcgga cggcattttg
     1861 ttcgttacgt ccgaaaataa ccgcaccatt cccgcctgtt tgaaaaatgc ggtggacatc
     1921 ggttctaaac cgaatgccga tgtggcttgg aaaaacaaac cggccggcat catcagccat
     1981 tccgtcggca agatgggggg atacagttcg caaaaaaacc tgcgccttgc gctgtcttat
     2041 ttcgatatgc ccgtaaccgg acagccggaa gtgtttttgg gcaattcgcc gacactgttt
     2101 gatgaaaacg gcaaattgat tgactcggca agggattttg ttcagtcata tattaatcag
     2161 tttgtcggtt tgattgaaag aaatgccaaa taaacaaacc aagtcgaaaa gccgcaaaac
     2221 cggttcgggt tttgcggctt ttttatatgg gctgggcagc gtcaaggttt gccgtttgcc
     2281 ggataatgcg cggcaaatga ccggcgt
//
LOCUS       DAWITQ010000215         2287 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.215, whole genome shotgun sequence.
ACCESSION   DAWITQ010000215 DAWITQ010000000
VERSION     DAWITQ010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2287)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2287)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2287
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.215"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            20..748
                     /gene="rpe"
                     /locus_tag="WIX18_002038"
     CDS             20..748
                     /gene="rpe"
                     /locus_tag="WIX18_002038"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEZ5239081.1"
                     /translation="MTTYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVP
                     NLTFGPMVCAALKPYASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSL
                     SLIRDMGCQAGLVLNPATPVYLLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRRV
                     RAMLDRYEAQSGRHIAIEVDGGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIDAM
                     RAELEKSGRLNLAPMIEIEMPSEN"
     gene            complement(771..1802)
                     /gene="ruvB"
                     /locus_tag="WIX18_002039"
     CDS             complement(771..1802)
                     /gene="ruvB"
                     /locus_tag="WIX18_002039"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HEZ5239082.1"
                     /translation="MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQH
                     KAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTLAHIIAKELGVNLRQTSGPVLER
                     AGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
                     LPPFTLVGATTRAGMLTNPLRDRFGIVSRLEFYENRDLATIVSRSAQLLQLDMSEEGA
                     EEIAKRSRGTPRIANRLLRRVRDFADVKNNGTIDGGIADAALSMLDVDVQGLDVMDRK
                     FLEAVLHKFGGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFLQRTPRGRMATERAY
                     LHFGLPVEK"
     gene            complement(1884..2192)
                     /locus_tag="WIX18_002040"
     CDS             complement(1884..2192)
                     /locus_tag="WIX18_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239083.1"
                     /translation="MTLKTDLLPKINNEDYQRLILKHSAEFSGGEIRLLNEILEKFNF
                     DVVQAQALAQAVMQQVRFDPNAYHIDSDDEDTTGICPHCINPPMPPLRDYLVWRETRG
                     "
BASE COUNT          463 a          549 c          733 g          542 t
ORIGIN      
        1 gatattgaag gaaaaaaaca tgactactta ccgtatcgca cccagcattt tatcggcaga
       61 ttttgcacgg cttggcgaag aggtggaaag cgtcattgcg gcaggtgcag atctgatcca
      121 ttttgacgtg atggacaacc attatgtgcc gaacctgacc ttcggcccta tggtttgcgc
      181 ggcgttgaag ccttatgcaa gcgtgccgat cgatgtgcat ctgatggtcg aacccgttga
      241 cgacctgatt cagtcgtttg ccaaagcagg agcatcaatc atcacgttcc atcccgaagc
      301 gagccgccat atcgaccgca gcttgagcct gattcgggac atgggctgtc aggcggggct
      361 ggtgttgaat ccggcaacgc ccgtatatct gttggaaaac gtattggaca ggctggatat
      421 ggttttgctg atgtcggtca accccggatt cggcggacaa agcttcatcc cgcacaccct
      481 tgaaaaaatc cgccgggtgc gggcgatgct ggatcggtac gaagcacaaa gcgggcggca
      541 catcgccatc gaagtggacg gcggcatcaa aaccgacaat attgccgccg ttgcccgagc
      601 tggtgcggat acctttgttg ccggttctgc gattttcggc aaaccagact ataaggcggt
      661 gattgatgcg atgagggcgg aactggaaaa aagcggcagg ctgaaccttg cgccaatgat
      721 tgaaatagaa atgccgtctg aaaattagct ctgtttcaga cggcattgcg ttatttttcg
      781 acgggcagcc cgaaatgcag gtaggcgcgt tcggtcgcca tcctgccgcg cggggtgcgt
      841 tgcaggaagc cttgttggat aaggtagggt tcgataacgt cttcgatggt gtctgttgat
      901 tcgccgatgg cggcggcaac attgtccaaa ccgaccgggc cgccgccgaa tttgtgcaaa
      961 acggcttcga ggaatttcct gtccatcacg tccagcccct gcacgtccac gtccagcata
     1021 cttaaagcgg catcggcgat gccgccgtcg attgtgccgt tgtttttcac gtcggcgaaa
     1081 tcgcgcacgc ggcgcaacag gcggttggcg atgcgcggcg taccgcggct gcgtttggcg
     1141 atttcttccg cgccttcttc ggacatatcg agttgcagga gttgtgccga acggctgacg
     1201 atggtggcaa ggtcgcggtt ttcgtaaaac tcgaggcggg agacgatgcc gaagcggtcg
     1261 cgcaacggat tggtcagcat accggcgcgg gtggtcgcgc cgacaagcgt gaagggcggc
     1321 aggtcgattt taacggaacg ggcggcgggc ccttcgccta tcataatgtc gagccggtag
     1381 tcttcaagcg cggggtagag gatttcttcg acaacagggc tgaggcggtg gatttcgtcg
     1441 ataaacaata cgtcgtgcgg atcaaggttg gtcaaaaggg cggcgagatc gccggcgcgt
     1501 tcgaggacgg ggccgctggt ttggcgcaaa tttacgccca attctttggc gatgatgtgc
     1561 gccagtgtgg ttttacccag tccgggcggg ccgaagagca aaacgtggtc gagtgcttcg
     1621 ccgcgttttt tggcggcttg gatgaaaatg gcgagctgtt ctttggcttt atgctgcccg
     1681 atatagtcgt ccagcgtttt ggggcggagg gcgcgttcga gcagttcttc ctgtgcggag
     1741 gcggtttggg cggcaacaat gcgttgcggt tgagcggcag tcaggttgtc ggtttgcagc
     1801 atagtgttcc ctttgtcggg tatgccgtct gaacggtcgg cggcgtttca gacggcattg
     1861 aaaagataac ggtcaaaagc gttttacccg cgcgtttcgc gccaaacgag atagtcgcgc
     1921 aggggcggca taggcgggtt gatgcagtgt gggcagatgc ctgtggtgtc ttcgtcgtcg
     1981 ctgtcgatgt gataggcgtt ggggtcgaag cggacttgct gcatcaccgc ctgcgccaac
     2041 gcctgcgcct gaacaacgtc gaaattgaat ttttcgagga tttcgttcaa taggcggatt
     2101 tcgccaccgc taaattccgc actgtgtttg aggatgaggc gttgataatc ttcgttgttg
     2161 attttaggca ataaatcggt tttcagggtc atgattttat gtcgggggcg gaatggctga
     2221 agcgtgaatt atagcggata tggcggcggc tgttgcaaag cttggattgg gtatcgtcct
     2281 caaaact
//
LOCUS       DAWITQ010000216         2283 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.216, whole genome shotgun sequence.
ACCESSION   DAWITQ010000216 DAWITQ010000000
VERSION     DAWITQ010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2283)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2283)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2283
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.216"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            295..807
                     /locus_tag="WIX18_002041"
     CDS             295..807
                     /locus_tag="WIX18_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEZ5239084.1"
                     /translation="MKNFNGKLILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA
                     GVPIPTIFEMEGEQGFRSRETAILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVV
                     YLHAPPETLLERTRCDNSRPLLQVADPLAKLRELYAARDPVYRQTADFTVESANCRET
                     VQTLLKRLSR"
     gene            887..1966
                     /gene="aroB"
                     /locus_tag="WIX18_002042"
     CDS             887..1966
                     /gene="aroB"
                     /locus_tag="WIX18_002042"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEZ5239085.1"
                     /translation="MKTLTVHTPSHSYPIFIGNGLLPQAGSLLKPHLGKRAAIIANET
                     VAPLYLGTLQTALDAAGVSHFSIILPDGEAHKNWQTLNLIFDGLMQNRAERKTTLIAL
                     GGGVIGDMVGFAAATYQRGAPFVQIPTTLLSQVDSSVGGKTAINHPLGKNMIGAFYQP
                     QAVLADLDTLHTLPVRELSAGMAEVIKYGALGDIGFFEWLEQNISGLMTLDREKLAQA
                     VYRCCQMKADIVAQDETEQGIRAWLNLGHTFGHAIETEMGYGTWLHGEAIAAGCVLAA
                     RLSEQLGKTSAADTARLAALLEAAGLPSAPPVFAFEKWLEHMSHDKKVSGGIMRFIGL
                     NRLGEANITEITDTDILRRTLQPYL"
BASE COUNT          562 a          709 c          548 g          464 t
ORIGIN      
        1 ttgataaaca tattatcttc aatatattca attggataat tgtttaccta agcaaagata
       61 attgcctttt cctgacaaat aagtgaaatc aacggattgt caaaacacag cctgaaataa
      121 aaaacctccc tgatttcttt tatttgtcct taaaatcaga aaggttcggg atggtcgggt
      181 tatttttcca aacgtaccgc cgccctgccg atttcgtata aaattccgcc gtaacccgac
      241 aagcccgaac cctgtcgccc cgaaaggcgg ggtgtcaaac attaaggaat tgtgatgaaa
      301 aactttaacg gcaaactcat cctcatcgga ctgatgggcg cgggcaaaac cacgctgggc
      361 cggcaaatgg cgcagcggct ggattaccgt ttttacgaca gcgatcacga aatcgccgca
      421 gccgccggcg ttcccatccc caccatattt gaaatggaag gcgaacaggg attccgttcg
      481 cgcgaaaccg ccatactcaa aaagctggtt atcctgcccc atatcgtcct gtccaccggc
      541 ggcggcgcgg tgttaaaaga agaaaaccgc gcccttatcc gcaaaagcgg cacggtcgtc
      601 tatctgcacg ccccgcccga aaccctgctc gaacgcacgc gctgcgacaa cagccgtcct
      661 ttgctgcaag ttgccgatcc tttggcgaaa ttacgtgaac tctacgccgc acgcgacccc
      721 gtttaccgcc aaaccgccga ctttaccgta gaatcggcaa actgccggga aaccgtgcaa
      781 accctgctca aacgcttatc ccgataaacc ggcatatgcg ccgcgcccag aaaaccaagc
      841 cgcgccccgc ccggcgggcc ggcggttcaa actttaagga acaacaatga aaacactgac
      901 cgtacacacc ccgtcccaca gctaccccat ctttatcggc aacggactgc tgccgcaggc
      961 aggaagcctg ctcaaaccgc atttgggcaa acgcgccgcc atcatcgcca acgaaaccgt
     1021 cgccccgctc tacctcggca cgcttcagac ggcattggat gcggcaggcg tatcccattt
     1081 cagcatcatc ctgcccgacg gcgaggcgca caaaaactgg cagacgctca acctcatctt
     1141 tgacgggctg atgcaaaacc gcgccgaacg caaaaccaca ttaatcgcac tgggcggcgg
     1201 cgtgatcggc gacatggtcg gctttgccgc tgccacctac cagcgcggcg caccgttcgt
     1261 tcaaataccg accacactgt tgagtcaagt cgactcatcg gtgggcggca aaaccgccat
     1321 caaccacccg ctcggcaaaa atatgatcgg cgcattctac cagccgcagg cggtgcttgc
     1381 cgacttggac acgctgcaca ccctgcccgt ccgcgaattg tccgccggta tggcggaagt
     1441 catcaaatac ggcgcgctcg gcgacatcgg ttttttcgaa tggctcgaac aaaacatatc
     1501 cggactgatg acgctcgatc gggaaaaact cgcccaagcc gtgtaccgct gctgccaaat
     1561 gaaggcagac atcgtcgccc aagacgaaac cgaacagggc atacgcgcat ggctcaacct
     1621 cggacacacc ttcggacacg ccattgaaac cgagatgggt tacggcactt ggctgcatgg
     1681 agaagccatc gccgccggct gcgtgttggc ggcgcgtttg tccgaacaac tgggcaaaac
     1741 ctccgccgca gataccgcgc ggctcgccgc cctgctcgaa gccgctggac tgccgtccgc
     1801 accgcccgtg tttgcctttg aaaaatggct cgaacatatg agccacgata aaaaagtcag
     1861 cggcggcatc atgcgcttta tcggtctgaa ccggctgggc gaagccaaca tcaccgaaat
     1921 taccgacacg gacatcctcc gccgcaccct gcaaccgtat ctctgatttc ctctgccgat
     1981 gtgctgccgc gcgggtttga cgcacgatga tgattttcca tcatctttct ccgtaaaagc
     2041 gggaatccgg tccgttcggt ttcggtcgtt tccgataagt tcccgttgct tttcatttct
     2101 agattcccac tttcgcagga atgacggtgg aaaggttttt gttgtttcgg agaagtttct
     2161 gcaaccctag aatctcgtta tttccacaaa aaacagaaac ccaaaacagc aacttaaaac
     2221 ctcgtcattc ccgcaaaagc gggaatccgg tccgttcggt ttcggtcgtt tccgataaat
     2281 tcc
//
LOCUS       DAWITQ010000217         2216 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.217, whole genome shotgun sequence.
ACCESSION   DAWITQ010000217 DAWITQ010000000
VERSION     DAWITQ010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2216)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2216)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2216
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.217"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            99..1910
                     /gene="typA"
                     /locus_tag="WIX18_002043"
     CDS             99..1910
                     /gene="typA"
                     /locus_tag="WIX18_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HEZ5239086.1"
                     /translation="MKQIRNIAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDS
                     NDLEKERGITILAKNTAIDYEGYHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQE
                     GPMPQTRFVTKKALALGLKPIVVINKIDKPSARPSWVIDQTFELFDNLGATDEQLDFP
                     IVYASGLSGFAKLEETDESNDMRPLFDTILKYTPAPSGSADETLQLQISQLDYDNYTG
                     RLGIGRILNGRIKPGQTVAVMNHDQQIAQGRINQLLGFKGLERVPLEETEAGDIVIIS
                     GIEDIGIGVTITDKDNPKGLPMLSVDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRL
                     QKELLTNVALRVEDTADADVFRVSGRGELHLTILLENMRREGYELAVGKPRVVYRDID
                     GQKCEPYENLTVDVPDDNQGAVMEELGRRRGELTNMESDGNGRTRLEYHIPARGLIGF
                     QGEFMTLTRGVGLMSHVFDDYAPVKPDMPGRHNGVLVSQEQGEAVAYALWNLEDRGRM
                     FVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKLTNIRASGTDEAVRLTTPIKLTLEGA
                     VEFIDDDELVEITPQSIRLRKRYLSELERRRHFKKLD"
BASE COUNT          566 a          627 c          581 g          442 t
ORIGIN      
        1 gcaagggctt cagacggcat cttcatttcc caaatactgt ccggtaaagc gtggtataat
       61 gcgcagttat ctcttacagt ttttgaaaaa cattaattat gaaacaaatc cgcaacatcg
      121 ccatcatcgc ccacgtcgac cacggcaaaa ccacattggt cgaccaactg ctgcgccaat
      181 ccggcacatt ccgagccaac cagcaggttg acgagcgcgt gatggacagc aacgacctcg
      241 aaaaagaacg cggcatcacc atcctcgcca aaaacaccgc catcgattac gaaggctacc
      301 acatcaatat cgtcgatacg ccgggacacg ccgacttcgg cggcgaagta gagcgcgttt
      361 tggggatggt ggactgcgtc gtcttgttgg tggacgcgca ggaaggcccg atgccgcaaa
      421 cccgtttcgt gaccaaaaaa gccttggctt tggggctgaa accgattgtc gtcatcaaca
      481 aaatcgacaa gccgtccgct cgtccgagct gggtcatcga ccaaactttc gagctgttcg
      541 acaacttggg cgcgaccgac gagcagttgg atttcccgat tgtttacgct tcagggttga
      601 gcggtttcgc caaattggaa gaaaccgacg agagcaacga catgcgtccg ctgttcgata
      661 ctatcttaaa atatacgcct gcaccgagcg gcagcgcgga cgaaacgctg caactgcaaa
      721 tttcccaact cgactacgac aactacaccg gccgcctcgg tatcggtcgt atcttgaacg
      781 gacgcatcaa acccggccaa accgttgccg tcatgaacca cgatcagcaa atcgcccaag
      841 gccgcatcaa ccagcttttg ggtttcaaag gtttggaacg cgtgccgctt gaagaaaccg
      901 aagccggcga catcgtgatt atttccggta tcgaagacat cggcatcggc gtaaccatca
      961 ctgataaaga taaccccaaa ggcctgccga tgttgagcgt ggacgaaccg acgctgacca
     1021 tggactttat ggttaacacc agcccgttgg cgggcacgga aggcaaattc gtaaccagcc
     1081 gccaaatccg cgaccgcctg caaaaagaat tgctgaccaa cgtcgccctg cgcgtggaag
     1141 ataccgccga tgccgacgtg ttccgcgtat ccgggcgcgg cgagctgcac ctgaccattt
     1201 tgctggaaaa catgcgccgc gaaggctacg aactcgccgt cggcaaaccg cgcgtcgtgt
     1261 accgcgacat cgacggtcaa aaatgcgaac cgtatgaaaa cctgaccgtg gacgtacccg
     1321 acgacaacca aggcgcggta atggaagaac tcggccgccg ccgtggcgaa ctgactaata
     1381 tggaaagcga cggcaacgga cgcacccgcc tcgaatacca tattccagcg cgcggcttga
     1441 tcggcttcca aggcgaattt atgaccctga cgcgcggggt cgggctgatg agccacgtgt
     1501 tcgacgatta cgcgcccgtc aaacccgata tgcctggccg ccacaacggc gtgctggtgt
     1561 cccaagagca gggcgaggca gtcgcttacg ccttgtggaa tctggaagac cgcggccgta
     1621 tgttcgtatc gcccaacgac aaaatctacg aaggtatgat tatcggcatc cacagtcgcg
     1681 acaacgattt ggtggtcaac ccgctcaaag gcaaaaaact taccaacatc cgtgccagcg
     1741 gtaccgacga agccgttcgc ctgaccacgc cgattaagct gacgctggaa ggtgcggtcg
     1801 agtttatcga cgatgatgag ctggtagaaa tcacgccgca atccatccgt ctgcgcaagc
     1861 gttacttgag cgaattggaa cgccgccgcc atttcaaaaa gctagattga tgtttactgg
     1921 attaatgttt aaatgatacg cgatgccgtc tgaaaaattt cagacggcat tttttattcg
     1981 gacgggcttt gcggcttctt gaagctgttt cagacggcgt ttttcctacc caatcaagaa
     2041 actgccgcca tttttccagc ggcatatcgc cccgtcgcgt ttcggtatcg ggttcggctt
     2101 cccggcagca tgtcgaacaa tgccgtttga aggaatacgc cttttgagtc cttacaagct
     2161 taggaagagg atatagtgga ttaacaaaaa tcaggacaag gcgacgaagc cgcaga
//
LOCUS       DAWITQ010000218         2216 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.218, whole genome shotgun sequence.
ACCESSION   DAWITQ010000218 DAWITQ010000000
VERSION     DAWITQ010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2216)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2216)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2216
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.218"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            136..2016
                     /locus_tag="WIX18_002044"
     CDS             136..2016
                     /locus_tag="WIX18_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacB/RNase II family 3'-5' exoribonuclease"
                     /protein_id="HEZ5239087.1"
                     /translation="MNIFYEESGQFKIAAIIQKNDATYQVDTPHGKRTKVKANNVFAE
                     FDGDMAAFLENAQAQAADIDTDLLWEVCGEEEFTAEAIAEEYYGHAPTKTELAATLIA
                     LYAAPMYFYKKAKGVFKAAPEETLKQALAAIERKKQQDAQIDAWAEALKRGEMPSEIA
                     ADLKTILHAPDKQSLTYKAFTKAADALKTSAYELGKKTGGITSIPQYLQDGFEIKYFP
                     KGTGFPDLPLPEMPDLPKADVTAFSIDDESTTEVDDALSLTDLGNGTKRVGIHIAAPS
                     LAVKPSDKMEKNIMERLSTVYFPGGKITMLPENWIAAFSLDAGAHRPAVSIYFDVDSK
                     FNVGAPTCKIEAVNISENLRIQAIEPHFNAEAGLDEAGEMMFAHHQDLIWFYQFAITL
                     QKARGKYEPNRAPQYDYSIELDKEDNVSVVRRERGSPIDTLVSEMMILANSTWAQMLH
                     DNDLPGLFRVQPTGKVRMSTKSEPHIGMGVQHYGWFTSPLRRAADYINQKQLISLIDD
                     TAEPLYQNSDAELFAALRDFDAAYTAYADFQRQMEAYWSLVYLQQQGTSELTATILKE
                     DLVRIEGLPLVTRATGIPFDALPKSQALFKITELDAEKQFVSLNYIKAVALAGKTAGN
                     AV"
BASE COUNT          601 a          674 c          518 g          423 t
ORIGIN      
        1 gtactggttt ttgttaatcc actataacgc aagcaccgca aagacgcgcc aaccctctcc
       61 caaccttttt tcagacggca ttttcggtaa tctgctaaaa tcgcccgctt gagtttccac
      121 agaaaaatcc gaaaaatgaa tattttttac gaagagtccg gccaattcaa aatcgccgcc
      181 atcatccaaa aaaacgatgc cacctaccaa gtcgataccc cacacggcaa acgcaccaaa
      241 gtgaaggcga acaacgtctt tgccgagttt gacggcgata tggcggcgtt tttggaaaac
      301 gcgcaggcac aggcggcgga catcgacacc gatttattgt gggaagtatg cggcgaagag
      361 gaatttaccg ccgaagccat cgccgaagaa tattacggcc atgcgccgac caaaaccgag
      421 ctggcggcaa ctttgattgc gctttacgcc gcgccgatgt atttctacaa aaaagccaaa
      481 ggcgtgttca aagccgcgcc cgaagaaacc ttaaaacaag cgcttgccgc catcgaacgc
      541 aaaaaacagc aggacgcaca aatcgacgct tgggcagaag ccttgaaacg cggcgagatg
      601 ccgtctgaaa tcgcggcgga tttgaaaacc atcctgcacg cgcccgacaa gcagtcgctg
      661 acctacaaag cctttaccaa agccgccgac gcgctgaaaa cctctgccta cgaactgggg
      721 aaaaaaacgg gcggcattac gtccattccc caatacctgc aagacgggtt tgaaatcaaa
      781 tacttcccca aaggaacagg ctttcccgac cttccccttc ccgaaatgcc cgacctgccc
      841 aaagccgatg ttaccgcctt ttccattgac gacgaatcga ccaccgaagt ggacgatgcc
      901 ttgagcctga ccgacttggg caacggcacg aagcgcgtcg gtatccacat cgccgcgccg
      961 tcgcttgccg ttaaaccgag cgacaaaatg gaaaaaaaca tcatggaacg cttgagtacg
     1021 gtttatttcc ccggcggcaa aatcacgatg ctgcccgaaa actggattgc cgcgttcagc
     1081 cttgatgcag gcgcacaccg ccctgccgtc agcatttatt tcgatgtgga cagcaaattc
     1141 aacgtcggcg cgccgacctg caaaatcgaa gcggtcaaca tctccgaaaa cctgcgtatc
     1201 caagccatcg aaccgcattt caacgccgaa gcgggcttgg acgaagcggg cgaaatgatg
     1261 ttcgcccacc atcaagacct gatttggttt tatcaattcg ccatcaccct gcaaaaagcg
     1321 cgcggcaaat acgagcccaa ccgtgcgccg caatacgatt acagcatcga attggataaa
     1381 gaagacaacg tatccgtcgt ccgccgcgaa cgcggctcac ccatcgatac gctggtcagc
     1441 gagatgatga ttcttgccaa cagcacttgg gcacaaatgc tccatgacaa cgacctgccc
     1501 ggcctcttcc gcgtccaacc caccggaaaa gtacgcatga gcaccaaatc cgagccgcat
     1561 atcggcatgg gcgtgcagca ttacggctgg tttacctcgc cgctgcgccg cgccgccgac
     1621 tacatcaacc aaaagcagct gatcagcctg atagacgaca ctgccgagcc gctgtatcaa
     1681 aacagcgatg ccgagctttt cgccgcactg cgcgactttg atgccgccta taccgcctac
     1741 gccgatttcc aacggcagat ggaagcctac tggagccttg tgtacctgca acagcaaggt
     1801 acaagcgagc tgaccgcgac catcctcaaa gaagacctcg tccgcatcga aggcctgccg
     1861 ctggtcacgc gcgcgaccgg tattccgttt gacgcgctgc ccaaatcaca ggcattgttc
     1921 aaaatcaccg aattagatgc cgagaagcag tttgtctcgc tcaactacat caaggcagtc
     1981 gcactcgcag gcaaaacggc aggcaatgcc gtctgaagcc cgatacggca aactccggca
     2041 aaaacagaaa cctgaatctc atcattccca cagtcgggaa tccggttttt tgggtttccg
     2101 ttgtttttcc gtttcaatga acttccaagc cgccgttccc gataaatacc cgcaatctaa
     2161 aatcccgtca ttcccacgca gatgggaatc taggtttatc cgcacagaaa ctgata
//
LOCUS       DAWITQ010000219         2194 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.219, whole genome shotgun sequence.
ACCESSION   DAWITQ010000219 DAWITQ010000000
VERSION     DAWITQ010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2194)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2194)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2194
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.219"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            31..516
                     /locus_tag="WIX18_002045"
     CDS             31..516
                     /locus_tag="WIX18_002045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239088.1"
                     /translation="MFVNEKDPYAALFAGLVFLTLPFALAVHDALAFVFGRTGLLVSV
                     SDGGFGWRGGWDGVVWFVYGVFAFLNLVVSAGLTKLAYKKMMRRHSRYALFLSGVAAC
                     AAAAVAWIFELLLGSGALGGLRGEAVLEYAFAVWLVAMLTLPKRLTRAPVQPVVFHRK
                     K"
     gene            612..1235
                     /gene="rsmG"
                     /locus_tag="WIX18_002046"
     CDS             612..1235
                     /gene="rsmG"
                     /locus_tag="WIX18_002046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HEZ5239089.1"
                     /translation="MERKERLRAGIAALGLDISAAAQDRLLAYVDLLKKWNKTYNLTA
                     LRDEEKMIVHHLLDSLTLLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQITLLDANT
                     KKTAFLQQAVIELGLDNVRVVSGRVEAVSDVRADVVTSRAFAELADFVSWTVHLLKDG
                     GYWAAMKGVYPQEEIGRLPQDVCVEKVQRLDVPGLEAERHIVILSKR"
     gene            1334..2107
                     /locus_tag="WIX18_002047"
     CDS             1334..2107
                     /locus_tag="WIX18_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEZ5239090.1"
                     /translation="MSANILAIANQKGGVGKTTTTVNLAASLASRGKRVLVVDLDPQG
                     NATTGSGIDKAGLQSGVYQVLLGDADVKSAAVRSKEGGYAVLGANRALAGAEIELVQE
                     IAREVRLKNALKAVAEDYDFILIDCPPSLTLLTLNGLVAAGGVIVPMLCEYYALEGIS
                     DLIATVRKIRQAVNPDLDITGIVRTMYDSRSRLVAEVSEQLRSHFGDLLFETAIPRNI
                     RLAEAPSHGMPVMAYDAQAKGAKAYLALADELAARVSGK"
BASE COUNT          422 a          503 c          761 g          508 t
ORIGIN      
        1 ttcggtctgc ttcggaagag ggggacggcg atgtttgtga acgagaaaga tccttatgcg
       61 gctctgtttg cgggactggt gtttttgacg ctgccgtttg cgttggcggt gcatgatgcc
      121 ttggcatttg tgttcggacg gacggggctg ctggtgtcgg tgtcggacgg cggattcggc
      181 tggcgaggag gctgggacgg cgtggtgtgg tttgtgtatg gcgtgtttgc gtttttgaac
      241 ctggtcgtgt cggcgggcct gacgaaactg gcgtacaaaa agatgatgcg gcggcattcc
      301 cgttacgcgc tgtttctgtc gggcgtggcg gcttgcgcgg ctgctgcggt cgcgtggatt
      361 ttcgagctgc tgcttggcag tggggctttg ggcgggctgc gtggggaggc ggtgttggaa
      421 tatgcgtttg ccgtgtggct ggtggcgatg ctgacgctgc ccaaacgcct gacgcgcgcg
      481 ccggtgcagc cggtggtgtt tcacaggaaa aaataggttg gaacgggaaa tgccgtctga
      541 accccgacac gcggtttcag acggcatgtt tttccgttaa cattacgcct gaacatggac
      601 aggataggga tatggaacgc aaagaacgcc tgcgtgcagg catcgccgca ttgggtttgg
      661 atatttccgc agcggcgcag gacaggcttt tggcctatgt ggatttgttg aaaaagtgga
      721 acaaaaccta caatctgacc gccctgcgcg acgaggaaaa aatgattgtc catcatcttt
      781 tggacagcct gacgctgctg ccccatatcg agggtgtgca aacgatgctg gatgtcggtt
      841 cgggcggcgg tcagcccggc attccggcgg cggtgtgccg tccggatgtg cagataaccc
      901 ttttggatgc gaatacgaag aaaacggctt ttttacagca ggcggttatc gagttgggat
      961 tggacaatgt gcgcgtggta tccggacgcg tggaggcggt ttcggacgtg cgtgccgatg
     1021 tggttaccag ccgtgcgttt gcagaactgg cggattttgt gtcgtggacg gtgcatctgt
     1081 tgaaagacgg cggctactgg gcggcgatga agggcgtgta tccgcaggaa gaaatcggcc
     1141 gcctgccgca ggatgtgtgc gttgaaaaag tccaaaggct cgacgtgccg ggcttggagg
     1201 cggaacgcca tatcgttatc ctgagcaagc gttgagcgcg cttcagacgg catgaatacc
     1261 ttttttgtgc ggataaaggt aaaattccgc actgtttttc ttttttcaac atcagacggg
     1321 acacgggcgg gacatgagtg cgaacatcct tgccatcgcc aatcagaagg gcggtgtggg
     1381 caaaacgacg acgacggtaa atttggcggc ttcgctggca tcgcgcggca aacgcgtgct
     1441 ggtggtcgat ttggatccgc agggcaatgc gacgacaggc agcggcatcg acaaggcggg
     1501 tttgcagtcc ggcgtttatc aggtcttatt gggcgatgcg gacgtgaaat cggcggcggt
     1561 acgcagcaaa gagggcggat acgctgtgtt gggtgcgaac cgcgcgctgg ccggcgcgga
     1621 aatcgagctg gtgcaggaaa tcgcccggga agtgcgtttg aaaaacgcgc tcaaggcagt
     1681 ggcggaagat tacgacttta tcctgatcga ctgtccgcct tcgctgacgc tgttgacgct
     1741 taacggcttg gtggcggcgg gcggcgtgat tgtgccgatg ttgtgcgaat attacgcgct
     1801 ggaagggatt tccgatttga ttgcgaccgt gcgcaaaatc cgtcaggcgg tcaatcccga
     1861 tttggacatc acgggcatcg tgcgcacgat gtacgacagc cgcagcaggc tggttgccga
     1921 agtcagcgaa cagttgcgca gccatttcgg ggatttgctt tttgaaaccg ccatcccgcg
     1981 caatatccgc cttgcagaag cgccgagcca cggtatgccg gttatggctt atgatgcgca
     2041 ggcaaagggt gccaaggcgt atcttgcctt ggcggacgag ctggcggcga gggtgtcggg
     2101 gaaataggtc aatccaaatc gggctgcccg tgcctttatg ctgtttggcc gggtgcgtta
     2161 atatggcgga ttaaaataaa aatacttata tcgt
//
LOCUS       DAWITQ010000220         2006 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.220, whole genome shotgun sequence.
ACCESSION   DAWITQ010000220 DAWITQ010000000
VERSION     DAWITQ010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.220"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            301..1758
                     /locus_tag="WIX18_002048"
     CDS             301..1758
                     /locus_tag="WIX18_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ5239091.1"
                     /translation="MSRHPAPTGEKTFFGHPFQLSTLFHIELWERFSFYGMQGILLIY
                     LYYTADKGGLGIDKTLAGGIVGAYSGSVYLSTILGAWFADRVWGAEKTLFLSGIVVML
                     GHIVLAAAPGLYGLLIGLIFIALGSGGVKSTASSMVGALYEQDEMRPLRDAGFSIFYI
                     AINIGGFLGPLLTGLLQENIGFHYGFGAAAVGMAFGLWRYSLGRKNLPHPTVPHPLSK
                     GQGKTAAAVGITLIAALATAIKTGLVNLDNFSGILLSTVILAVIAYFARLLTNPRVSS
                     DNKRHIIAYIPLFLTICMFWAVWFQIYTVATVYFDETVNRTIGSFTVPVAWKDSMQSL
                     WVILFSGLMAAMWTKMGRKQPKTPLKFAMAVFVTGASFLGFVPFISAGTPMPIAVFAL
                     IVLAITIGELMISPIALSISTKIAPPLFKTQMVALNFLAFSLGFTLGGVLFEKGYQAG
                     DEIGFYRLLFYIGATTGFLLLLLVPKLNKMLEGTD"
BASE COUNT          451 a          601 c          463 g          491 t
ORIGIN      
        1 atagtacggc aaggcgaggc aacgccgtac tggtttttgt taatccacta taaaaaaccg
       61 ccctatcgga taagccctta acagaaaagg ctttacccgc gccgtatcgg aacacatcct
      121 ctaaaataca atccgttgaa ttgaaaaaaa tataaaaaca tccgcccgcg aaaaacggca
      181 gcgcgtcgtt tgacaaagaa tgaaaatatc ggttaaaaac cgattttcat acaaaaaaca
      241 ccgctgccgt ccgcatccgt ttcagacggt attgagagaa aatcttttag gagaaccttt
      301 atgtcccggc atcccgcccc caccggagaa aaaacattct tcggccaccc cttccagctt
      361 tccaccctct tccatatcga attgtgggaa cgtttttcat tttacggaat gcagggcatc
      421 ctgctgattt acctctacta caccgccgac aaaggcggct tgggcataga caaaaccctc
      481 gccggcggca ttgtcggcgc atacagcggc agcgtgtacc tgtccaccat tttgggggcg
      541 tggtttgccg accgagtatg gggtgcggaa aaaaccctct tcctctcggg catcgtcgtg
      601 atgctcggac acatcgtcct tgccgccgcc ccgggcctgt acggtctttt aatcgggctg
      661 atattcatcg cattgggcag cggcggtgtg aaatctacgg ccagttctat ggtgggcgca
      721 ttatacgaac aggacgaaat gcgcccgctg cgcgatgcgg gattttccat tttctacatc
      781 gccatcaaca tcggcggctt cctgggcccg ctgctgaccg gcctgctgca ggaaaacatc
      841 ggtttccatt atggtttcgg cgcggcggcg gtcggtatgg cattcggctt gtggcgttat
      901 tccttgggac gtaaaaacct gccccacccc accgtccccc atccgctttc aaaaggacag
      961 ggcaaaactg cggccgccgt cggcatcacc ctcatcgccg cacttgcaac cgccatcaaa
     1021 accgggcttg tcaacctcga caatttctcc ggcatcctct tatctaccgt catccttgcc
     1081 gtcattgcct atttcgcccg cctgctgacc aacccccgcg tcagttccga caacaaacgg
     1141 cacatcatcg cctacatccc gcttttcctg accatctgta tgttttgggc cgtctggttt
     1201 cagatttaca ccgtggcaac cgtctatttc gacgaaaccg tcaaccgcac catcggttcg
     1261 tttaccgtgc ccgtcgcctg gaaagattcc atgcaaagcc tgtgggtcat cctgttttcc
     1321 ggactgatgg cggcaatgtg gacaaaaatg gggcgcaaac agcccaaaac cccgctgaaa
     1381 ttcgctatgg cggtatttgt taccggcgcg tcgtttttgg gattcgtccc ctttatttcc
     1441 gccggcacgc cgatgcctat tgcggttttc gcactgattg tccttgccat cacgataggc
     1501 gaactgatga tttccccgat tgcgctgtcc atctccacca aaatcgcacc gcctttattc
     1561 aaaacccaaa tggtcgccct taatttcctt gccttttcat taggcttcac tttgggcggc
     1621 gtattgtttg agaaaggcta tcaggcgggc gacgaaatcg gcttctaccg gctgctgttc
     1681 tacatcggcg caaccacagg cttcctgctg ctcctgctcg tccccaaatt gaacaaaatg
     1741 ctcgaaggca cagactaagt cccgccccga tgcgccgatg ccgtctgaac ccttcagacg
     1801 gcatttttcc gcataatgaa accaaaccgt ttccacccga caggacaggc tccccccaac
     1861 cggaaggcag cctgccgatt gtcatttgaa tatctgactg attccgtctg tttgcaaggg
     1921 aaatagccgt ttatttccgc ttgggcggaa accggttcta ttgagtaaaa ggcattttat
     1981 ccgactaaat tagtgctgca tcaacg
//
LOCUS       DAWITQ010000221         1932 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.221, whole genome shotgun sequence.
ACCESSION   DAWITQ010000221 DAWITQ010000000
VERSION     DAWITQ010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1932)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1932)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1932
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.221"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(28..345)
                     /locus_tag="WIX18_002049"
     CDS             complement(28..345)
                     /locus_tag="WIX18_002049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HEZ5239092.1"
                     /translation="MVVRGGIYLVSLDQTVGSEIKKTRPCVVVSPPEIHNYLKTVLIV
                     PMTSGSRPAPFRVNVRFQDKDGLLLPEQIRAVDKAGLVKHLGNLDNSTAEKLFAVLQE
                     MFA"
     gene            complement(339..578)
                     /locus_tag="WIX18_002050"
     CDS             complement(339..578)
                     /locus_tag="WIX18_002050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="growth regulator"
                     /protein_id="HEZ5239093.1"
                     /translation="MILNIRKMGNSQGVILPKSLLGQIGAVDSLAVTVEKGNIILSCP
                     TVRRGWAEAAAMLVETEQEHFFSEIENEADKEWIW"
     gene            complement(701..1498)
                     /gene="truA"
                     /locus_tag="WIX18_002051"
     CDS             complement(701..1498)
                     /gene="truA"
                     /locus_tag="WIX18_002051"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HEZ5239094.1"
                     /translation="MDTAQKQRWAITLSYDGSRFYGWQKQADGVPTVQAALETALAQI
                     AGESVATTVAGRTDTGVHATAQVVHFDTAAARPQQAWIRGVNAHLPEGIAVLHARQVA
                     PEFHARFDAYGRHYRYLLESAPVRSPLLKNRAGWTHLKLDIEPMRQAAAYLIGEQDFS
                     SFRAAECQAKSPVKTIYRADLTQSAGLVRLDLHGNAFLHHMVRNIMGALVYVGSGRLS
                     VEGFAALIQERSRLKAPPTFMPDGLYLTGVDYPEAYGIIRPQIPEWL"
BASE COUNT          438 a          458 c          541 g          495 t
ORIGIN      
        1 tgaacacaat ccattcagac tattcaatca ggcaaacatc tcctgcaata ctgcaaacag
       61 tttttcagcc gtactgttgt ctaaatttcc aagatgtttg accaatccgg ctttatccac
      121 agccctaatc tgttcgggca aaagcaaacc gtctttatcc tgaaagcgga cattgacgcg
      181 gaacggggca ggacggcttc cgctcgtcat gggaacgatc agcacagtct tgagatagtt
      241 gtgtatttca ggaggagaga ctacgacaca aggacgtgtc tttttgattt cgcttcctac
      301 ggtctggtct aaggagacca gatagattcc gccgcgtact accatatcca ttctttatcc
      361 gcttcgtttt caatttcgga aaaaaaatgc tcctgctcgg tttcgacaag cattgcggca
      421 gcttctgccc atcccctgcg aacggtagga cagcttaaaa taatattgcc cttttcaact
      481 gtaacagcca agctgtccac tgcccctatt tgacccaata atgatttggg cagaatcacg
      541 ccttgcgagt ttcccatttt gcgtatgttg agaatcatat acgtaccata tttaccagtt
      601 tatgtaataa caatgttatt accttgctga ggtagtgtca acattgaaaa agattgcctg
      661 acagtttgtc cgatttcaaa atctccgcga caagaatgtt ttaaagccat tcggggattt
      721 gggggcggat gatgccgtat gcctcgggat agtcgacgcc ggtcaggtaa agcccgtcgg
      781 gcatgaaggt cggcggggct ttgaggcggc tgcgttcttg aatcagtgcg gcgaagcctt
      841 cgacgctgag tctgccgctg ccgacataaa cgagcgcgcc catgatgttg cgtaccatat
      901 ggtgcaaaaa ggcgttgccg tgcaaatcga ggcggacgag tcctgcgctt tgggtaaggt
      961 cggcgcggta gatggttttg acgggggatt ttgcctggca ttcggcggcg cggaagctgg
     1021 agaagtcttg ttcgccgatc aaataggcgg cagcctgccg catcggttcg atgtcgagtt
     1081 tgaggtgtgt ccagcctgcc ctgtttttga gcagggggga acggacgggg gcggattcga
     1141 gcaggtagcg gtagtgccgt ccgtatgcgt caaatcgtgc atgaaattcg ggggcgacct
     1201 gtcgggcgtg caaaacggca atgccttcgg gcaggtgggc atttacgccg cgtatccatg
     1261 cctgttgggg acgggcggcg gcagtatcaa aatgaacgac ttgggcagtc gcatgaacgc
     1321 cggtatcggt tctgccggca acggtggtgg cgacagattc tcctgcgatt tgggcgagcg
     1381 cggtttccaa tgccgcctga acggtcggta cgccgtcagc ctgtttctgc cagccgtaaa
     1441 agcggctgcc gtcataggat agggttattg cccaacgttg tttttgtgcg gtatccatcg
     1501 gatttgggat tcggataaat gttcagactg cattgtatcg cagattttgc agggaaacgg
     1561 caaacgcccg gggcgagcgg cgttgtttgg ggagttgggg gggtggatgc agttgctacg
     1621 aatcgctatc ctgtgaattc accctgtcag gagtgcccga atcgtcattc ccgcgcaggc
     1681 gggaatctag gacgtaaaat ctaaagaaac cattttatag tggattaaca aaaaccagta
     1741 cagcgttgcc tcgccttagc tcaaagagaa cgattctcta aggtgctgaa gcatcaagtg
     1801 aatcggttcc gtactatctg tactgtctgt ggcttcgtcg ccttgtcctg atttttgtta
     1861 atccactata tccgataagt ttccgcaccg acaaaactag attcccactt tcgtgggaat
     1921 gacgggatgc ag
//
LOCUS       DAWITQ010000222         1893 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.222, whole genome shotgun sequence.
ACCESSION   DAWITQ010000222 DAWITQ010000000
VERSION     DAWITQ010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1893)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1893)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1893
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.222"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(205..1023)
                     /gene="cysE"
                     /locus_tag="WIX18_002052"
     CDS             complement(205..1023)
                     /gene="cysE"
                     /locus_tag="WIX18_002052"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HEZ5239095.1"
                     /translation="MKKDHLNTTGFDLWHTIREETAAAVSAEPMLASFLHQTVLRHES
                     LGSVLAYHLSSKLGSPIMDVRALFEIYQQALGSDTQIGKCVEADLKAIYERDPACDEY
                     SLPLLYFKGFHAIQAHRINHRLYLDGRKTLAYFLQNRMSEVFGVDIHPAARFGYGLML
                     DHATGFVAGETAVLGNNISILHGVTLGGSGKEGGDRHPKIGDGVMIGANASILGNIRI
                     GSNAKIGAGSVVVSDVPPSITVVGVPAKPVARSLKTPSADMDQNIQFTEIDFMI"
     gene            1207..1785
                     /gene="grpE"
                     /locus_tag="WIX18_002053"
     CDS             1207..1785
                     /gene="grpE"
                     /locus_tag="WIX18_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEZ5239096.1"
                     /translation="MSEQTQQQNSEEAVENVEAVETVETVGNVDGVQEQAAAEPAYED
                     LQARIAELEAQLKDEQLRALANEQNLRRRHQQEIADTHKFAGQKFAVEMLPVKDYLEM
                     ALLDQSGNFDALKMGVQMTLNELQKAFDATQIKEINPKAGDKLDPNIHQAMQAVASEQ
                     EPNTVVGVMKKGYTLSDRVLRPAMVTVAQKEA"
BASE COUNT          436 a          429 c          578 g          450 t
ORIGIN      
        1 cgtactgtct gcggcttcgt cgccttgtcc tgatttttgt taatccacta tatttccggt
       61 tgcgtgggaa tcgggtgtat tgaataaaag gcattttgtc cgactggcaa gtgccgacat
      121 cggcggcata tcaaggcgca ggcttgaagc gggcaatgtc gtctgaagcc cgtttggcgt
      181 ttcagacggc attggtgcgg atattcaaat cataaagtcg atttcggtaa actggatatt
      241 ttgatccata tccgccgacg gtgttttgag cgatcgcgcc acgggtttgg cgggtacgcc
      301 gacaaccgtg atggacggcg gcacgtctga aaccacgacg ctgcccgccc cgattttggc
      361 attgctgccg atgcggatat tgcccaatat cgaggcgttt gcgccgatca tcacgccgtc
      421 gccgatttta gggtggcggt cgccgccttc tttgcccgaa ccgccgagcg ttacgccgtg
      481 caaaatcgaa atattgttgc ccaacacggc ggtttcgccg gcaacaaagc cggtggcgtg
      541 gtcgagcatc agaccgtatc cgaaacgggc ggcgggatgg atgtccacgc cgaatacttc
      601 ggacatacgg ttttgcagga aatacgccag cgttttgcgc ccgtcgagat acagccggtg
      661 gttgatgcgg tgtgcctgaa tcgcgtggaa gcctttgaaa tataaaagcg gcagcgaata
      721 ttcgtcgcag gcgggatcgc gttcgtagat ggcttttaag tctgcttcga cgcatttgcc
      781 gatttgggtg tcgctaccca acgcctgctg gtagatttca aacagcgcac gcacgtccat
      841 aatcgggctg ccgagtttgc tggaaaggtg gtaggcaagg acggagccga gggactcgtg
      901 gcgcaacacg gtttggtgca aaaaacttgc cagcatcggt tcggcggaga ccgcggccgc
      961 ggtttcttcg cggatggtgt gccagaggtc gaaaccggtt gtgtttaaat ggtctttttt
     1021 catgagtgat gacgtttgaa aatcgatatg gtcggcagta tcttaccgtc tatattattt
     1081 tttcggtagg ggatttgaaa atgaatttga aattctctgc ctttgcttga agtttcttga
     1141 aaatgtcctt atcttgcgcg ggtaataact ggattttgat ttccaatttg ttttaaggga
     1201 tacgatatga gcgaacagac acagcagcaa aacagtgaag aagcggttga aaatgtggag
     1261 gcggtggaaa ctgtcgagac agtaggaaat gtggacggtg tgcaggaaca ggctgccgca
     1321 gagccggctt atgaggattt gcaggcgcgg attgccgagc tggaagcgca gttgaaagac
     1381 gagcagctgc gcgctttggc aaacgagcaa aacctgcgcc gccgccacca gcaggaaatt
     1441 gcggatacgc acaagttcgc cggacagaag tttgccgtgg aaatgctgcc ggtcaaggat
     1501 tatctggaaa tggcgctttt ggatcagagc ggcaatttcg atgcgctgaa aatgggcgtg
     1561 cagatgactt tgaacgagtt gcagaaagca tttgatgcta cgcaaatcaa ggaaatcaac
     1621 cctaaagcgg gcgataagct cgatccgaat atccatcagg cgatgcaggc ggtggcaagc
     1681 gaacaggagc cgaataccgt ggtgggtgtg atgaagaagg gttatacgct gtccgaccgc
     1741 gtgttgcgcc cggctatggt tacggtggcg cagaaggaag cctgaaggcg tctggggaat
     1801 aatctgattt atttcctgaa gcgcgttttg cgtataaacc gatcgaagta aagcggcaat
     1861 gccgtctgaa cccgcctgtc gggcttcaga cgg
//
LOCUS       DAWITQ010000223         1883 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.223, whole genome shotgun sequence.
ACCESSION   DAWITQ010000223 DAWITQ010000000
VERSION     DAWITQ010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1883)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1883)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1883
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.223"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(127..1437)
                     /locus_tag="WIX18_002054"
     CDS             complement(127..1437)
                     /locus_tag="WIX18_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HEZ5239097.1"
                     /translation="MTDLFAREPDAPLAERLRPHTLDDVVGQEHLIGEGKSLRVAVEG
                     GKPHSMLLWGPPGVGKTTLARILAQSFNAQFLPVSAVFSGVKDIRGAIDKAEIALQQG
                     RATILFVDEVHRFNKAQQDAFLPYVENGLLTFIGATTENPSFEVNPALLSRAQVYVLQ
                     SLSSDDLKKLIAKVLALPEYQEFTIETDAQKLLVNTADGDARRLLNLLEQLLGAAETR
                     RLKTLTAEFLADSLGAQIRRFDKGGESFYNQISALHKSVRGSHPNAALYWFCRMLDGG
                     TDPRYLARRIVRIAWEDIGLADPRALQIANDAAATFERLGSPEGELALAQAVLYLAAA
                     AKSNAGYKAYNQMRRFVKENASDEVPVHLRNAPTKLMKELGYGREYRYAHDEPNAYAA
                     GESYMPDCLDEPDFYQPVPRGLEIKIGEKLEWLKSLDEEVLKAK"
     gene            1680..1880
                     /locus_tag="WIX18_002055"
     CDS             1680..1880
                     /locus_tag="WIX18_002055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239098.1"
                     /translation="MALLIQSALCFEAEAHEYTNIQEMEWVSLFSDPQKDDDSLITLK
                     DEKITVKNYIVPWWKKVKTLEN"
BASE COUNT          454 a          494 c          480 g          455 t
ORIGIN      
        1 ttaatccact ataccacgtt gtctttattg gctttatcaa taaacaggat aagacctgaa
       61 aaaaagccga tacgcctttt tggtgtaccg gctttgccat actgttctgc ttcagacagc
      121 attgcttcat tttgccttta atacttcttc gtccagcgat ttcaaccatt ccagcttttc
      181 gccgattttg atttccaacc cgcgcgggac gggttggtag aagtccggtt cgtccaagca
      241 gtcgggcata tagctttcgc cggcggcgta ggcgttcggt tcgtcgtggg cgtagcggta
      301 ttcgcgtccg tagcccaatt ccttcatcag cttggtcggg gcattgcgca ggtggacggg
      361 tacttcgtcg ctggcgtttt ctttgacgaa acggcgcatt tgattgtatg ccttgtagcc
      421 cgcgttggat ttcgcggcgg cggcaagata caataccgct tgcgccaaag ccagttcgcc
      481 ttcgggcgag cctaagcgtt cgaaggtggc ggcggcatcg ttggcgattt gcaaggcgcg
      541 cgggtcggca agcccgatgt cttcccaagc gatacgcacg atgcggcggg cgaggtagcg
      601 cgggtcggtg ccgccgtcga gcatacggca gaaccaatac agcgcggcgt tcggatgcga
      661 accgcgcacg gatttgtgca gggcggagat ttggttgtag aaactctcgc cgcctttgtc
      721 gaaacggcgg atttgcgccc cgagactgtc ggcgagaaat tcggcagtca gggttttcag
      781 acggcgcgtt tcagcggcgc ctaacagttg ttccaacaaa ttcaacaatc tgcgcgcatc
      841 accgtcggcg gtattcacga gtaatttttg cgcatccgtt tcaatcgtaa actcttggta
      901 ttcaggcaaa gccaatacct tggcaatcag ctttttcagg tcgtctgaag acaaggattg
      961 caaaacatac acctgcgcgc ggctcaacag cgcgggattc acttcaaacg acggattttc
     1021 cgtcgttgcg ccaataaagg tcagcaaacc gttttccaca taaggcaaaa acgcatcctg
     1081 ctgcgccttg ttgaagcggt ggacttcatc gacaaacaaa atcgtcgccc tcccctgctg
     1141 caaagcgatt tcagccttgt cgattgcccc gcgtatgtct tttacgccgg aaaacacggc
     1201 ggaaacaggc agaaactggg cattgaaact ctgcgccaaa atccgcgcca acgtcgtctt
     1261 gcccacgccc ggcggccccc acagcaacat agaatgcggc ttgccccctt ctaccgccac
     1321 gcgcaaagat ttaccttcgc cgatgaggtg ttcctgcccc accacgtcgt caagcgtatg
     1381 cggacgcaat cgttcggcaa gcggcgcgtc gggttctcgg gcaaacaaat cggtcataac
     1441 ggctccgtca acaggttttc aaacaatatg attatacggc agggaacggc ggcgtgccgc
     1501 atacggattc cgcccctccg tttgccttaa gccgatatta ggcgcatact ggaaaagacg
     1561 agagacttca cacaatatat ccggcacgga gaccgattcc gcaccggcat gacaataccc
     1621 aaatcagcgt ttcaattaaa cattaaggag actaaaatag aaaatttgct ttatctacca
     1681 ttgctttgtt gattcaatcg gcattatgtt ttgaggcgga agcccatgaa tatactaata
     1741 ttcaagagat ggaatgggtg tctttatttt ctgatccgca aaaagacgat gatagtctta
     1801 taacccttaa agatgaaaaa atcactgtaa aaaactatat tgtgccttgg tggaaaaaag
     1861 tgaaaacttt agaaaattag aac
//
LOCUS       DAWITQ010000224         1881 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.224, whole genome shotgun sequence.
ACCESSION   DAWITQ010000224 DAWITQ010000000
VERSION     DAWITQ010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1881)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1881)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1881
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.224"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..747
                     /gene="mafB"
                     /locus_tag="WIX18_002056"
     CDS             <1..747
                     /gene="mafB"
                     /locus_tag="WIX18_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HEZ5239099.1"
                     /translation="IKLNPTDTRSIRQRISDNYSNLGSNFSDRADEANRKMFEHNAKL
                     DRWGNSMEFINGVAAGALNPFISAGEAVDQWMQENPNAAETVEALVNVLPFAKVKNLT
                     KAAKPGKAAVSGDFSDSYKHNTASRLSQSVDGEMFQTRNVDFKAKSIGTKIHDGAQGK
                     HISGHRNYIEGKSTLNQNINPQELLNGIHSGAYPVISKGARGNPVVDFGYPIGSDGKS
                     GLSTNFGTIHSGKNGVHIVPANPKTIKKVQ"
     gene            750..1067
                     /locus_tag="WIX18_002057"
     CDS             750..1067
                     /locus_tag="WIX18_002057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239100.1"
                     /translation="MNILPSWLRVGMNIAMLGMIHSDIRLITVDYEEGRRFLKIKNYL
                     SREAITEDHEDMEYLITELWSMCGEYFDEADFECIYSNHSSMELNQINGAVFRRKELI
                     SQA"
     gene            1201..1877
                     /locus_tag="WIX18_002058"
                     /pseudo
     CDS             1201..1877
                     /locus_tag="WIX18_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670623.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hint domain-/BECR-fold containing toxin"
BASE COUNT          633 a          397 c          414 g          437 t
ORIGIN      
        1 atcaaactca atccgaccga cacccgcagc atccggcaac gcatatccga caattacagc
       61 aacctcggca gcaatttctc cgaccgcgcc gatgaagcca acagaaaaat gttcgagcac
      121 aatgccaagc tcgaccgctg gggcaacagc atggagttta tcaacggcgt cgccgccggc
      181 gcgctcaacc cctttatcag cgcgggcgaa gccgttgacc agtggatgca ggaaaacccc
      241 aatgccgccg aaaccgtcga agccctggtc aacgtcctgc cgtttgccaa agtcaaaaac
      301 ctgacaaagg cggcaaaacc ggggaaggct gcggttagtg gggatttctc agactcctac
      361 aagcataaca ctgcttcaag attatctcag tctgtagatg gagaaatgtt tcaaacccgc
      421 aatgttgatt ttaaagcaaa atctattggg actaaaattc atgatggagc tcaagggaaa
      481 catatttcag gacatagaaa ctacattgaa ggtaagagta ctttaaatca aaacattaat
      541 cctcaagaat tgttgaacgg aatacattca ggtgcttatc cagttatttc taaaggagca
      601 agaggaaatc ctgttgttga ttttgggtat cctataggca gcgatgggaa atcaggatta
      661 agtaccaatt ttggtacgat tcattcaggt aaaaatggag ttcacattgt tccggctaac
      721 cctaaaacca ttaaaaaggt gcaatagtta tgaatatatt accaagctgg ctgcgagtcg
      781 gtatgaatat agcaatgctg ggcatgatac actcagatat caggttaatt accgtagatt
      841 acgaggaagg aagaaggttt ttaaaaatca aaaattattt atcaagagaa gccatcacag
      901 aagaccatga agatatggaa tatttgatta cagagttatg gtctatgtgt ggagaatatt
      961 ttgatgaagc tgactttgaa tgtatttatt ctaatcattc ttctatggag ttaaaccaaa
     1021 taaatggtgc agtattcagg agaaaggaat taatttcgca agcgtaggtt aaaaaaccaa
     1081 caatcacaat gtcttctgaa accgtgttta attttcagac ggcatttcct tcgtttgaaa
     1141 taggatattg agaactgagt tcttcaaaaa tcctacactt gctccttcca cggcagcacc
     1201 ttggtcaaaa cggcagacgg ctgaaaagcc attgcccgta tccgaaccgg cgaccgcgtc
     1261 ttcgccaagg acgaggcaag cggaaaaacg ggatacaaac ccgttaccgc ccgatacggc
     1321 aatccgtatc aagaaaccgt ttacattgaa atttcagacg gcatcggtaa aatacagacc
     1381 ctcgtttcca ataaaatcca cccgttttac agtcaaggaa agtggataca ggcaggtcgt
     1441 ctgaaaaaag gcgacaccct gctttccgaa agcggtgcaa aacagacggt tcaaaacatt
     1501 accctcaaac agcagccgct caaagcctac aatctgaccg ttgccgactg gcatacctac
     1561 ttcgtcaagg gtaatcaggc ggaacggaag gggtttgggt tcataatgcg tgtccgccaa
     1621 gaaaaacacc atctaccccc gtatatggga atgattcaga agcatatgca gcagcaaaga
     1681 aattgggata tagaaaaata aaagaaagaa cgagaaatga tgctgctatt tttaaaaaag
     1741 gaaagagtta tatatcacgc gatgtagatt cacataatgg aggggcttgg aaagaagcat
     1801 cttcacccaa gaagctgaac agaaaagaaa caagaaacgg tacatttgat aaaaacctaa
     1861 atcgtattgg agattaatta t
//
LOCUS       DAWITQ010000225         1872 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.225, whole genome shotgun sequence.
ACCESSION   DAWITQ010000225 DAWITQ010000000
VERSION     DAWITQ010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1872)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1872)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1872
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.225"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(16..222)
                     /locus_tag="WIX18_002059"
     CDS             complement(16..222)
                     /locus_tag="WIX18_002059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239101.1"
                     /translation="MNIIGKLKEAASYFLTKLIGENPSNEQVNRALIQMPNVRPIHTY
                     PRPNLRNSGVAAAKRAARKRKNRR"
     gene            complement(219..764)
                     /locus_tag="WIX18_002060"
     CDS             complement(219..764)
                     /locus_tag="WIX18_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEZ5239102.1"
                     /translation="MGKTVTLTAGHSNTDPGAVNGSDREADLAQDMRNIVASILRNDY
                     GLTVRTDGEGKGNMPLRDAVKLIRGSDVAIEFHTNAAVSKAATGIEALSTVKNKRWCQ
                     VLSKAVAKKTGWKLRGEDGFKPDNAGQHSRLAYAQAGGIVFEPFFISNDTDLALFKTT
                     KWGICRAIADAIAMELGAARV"
     gene            complement(921..1349)
                     /locus_tag="WIX18_002061"
     CDS             complement(921..1349)
                     /locus_tag="WIX18_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mor transcription activator family protein"
                     /protein_id="HEZ5239103.1"
                     /translation="MAFEKVEHLLPDTVLDIVDVIGLAATEQLVKAIGGARFKFGKGK
                     VDTERLAILVEAIGEVKTHELLQVYGGEELYVPRCGKALIQLRNHRFYQEFVKLRDID
                     KESGLMAMTKLCPKYGISSRTGYTIINEMSRPAAQQAALF"
     gene            complement(1330..1764)
                     /locus_tag="WIX18_002062"
     CDS             complement(1330..1764)
                     /locus_tag="WIX18_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gp16 family protein"
                     /protein_id="HEZ5239104.1"
                     /translation="MRRALIAKIKIAQKELGLDDGTYRAVLERVTGKRSCADMDVSEL
                     ESVVADMRSHGFKPKAKGNPHGKPHLRRTSSAAMLDKVEALLTVGGKHWNYAHAMARR
                     MFGKDKVEYLDDTQLHKLVAALQIAENRKTEKAGGDDGVRKS"
BASE COUNT          455 a          541 c          383 g          493 t
ORIGIN      
        1 caacctgtcc catgattaac gacgattctt gcgtttgcgc gccgcgcgtt tggctgccgc
       61 cacgcctgag tttcttaaat ttgggcgtgg ataggtgtgt atcggacgaa catttggcat
      121 ctgtataagt gcgcggttta cctgctcatt actaggattt tctccaatca attttgtaag
      181 aaaataggaa gcagcttctt tcaatttacc aataatattc atactcttgc cgcccccaat
      241 tccatcgcaa tcgcgtccgc aatcgcgcgg cagatgcccc atttagtagt cttaaacaag
      301 gctaaatcag tgtcgttgct gataaaaaac ggctcaaaca caatgccgcc ggcttgtgca
      361 taagccaggc gcgaatgctg gcccgcattg tcgggtttaa agccgtcttc gccgcgcagt
      421 ttccagccgg ttttcttggc aacagctttg ctcaacacct gacaccagcg tttgttttta
      481 acggtactca aggcttcgat gcctgtcgcc gctttgctga cggcagcgtt ggtgtgaaac
      541 tcaatcgcca catccgagcc gcgaatcagc ttgaccgcat cgcgcaaggg catattgcct
      601 ttgccttcgc cgtcggtgcg tacggtcagg ccgtaatcgt tacgcaggat tgaagccacg
      661 atgttgcgca tatcctgcgc caagtccgcc tcacggtcgc ttccgttgac cgcgcccggg
      721 tcggtgttac tgtgtccggc ggttaaagtt acagttttgc ccattcatca tctccaaaaa
      781 atattgattg cataacattt gaaaacccca ttaaaccgtc tttaacccat cgtcccgaac
      841 ggtagatgtt tcatccccta caaaccaaaa aaaaagaccg tctgaataca gacggccaaa
      901 gcctggtcac acatcactgc ctaaaataaa gctgcctgct gtgccgcagg tcggctcatt
      961 tcattgataa tcgtatatcc tgttcgtgaa gagataccgt atttagggca tagcttcgtc
     1021 atcgccataa gcccgctctc cttatcaata tcgcgcaatt tgacaaactc ctgataaaac
     1081 ctatggtttc tcaactgtat taacgccttg ccgcaccgtg ggacatacaa ttcctcgcca
     1141 ccatatacct gcaacagctc atgtgttttc acttcgccga tggcttcgac caaaattgcc
     1201 aaacgctcgg tgtccacctt gcccttacca aatttaaacc gcgccccgcc aatcgccttg
     1261 accagctgtt ccgtcgctgc cagtccgatg acatccacaa tgtccaacac ggtatccggc
     1321 aataaatgtt caactttttc gaacgccatc atccccaccc gctttttccg ttttcctgtt
     1381 ttccgcaatc tgcaacgcag caaccagttt atgtagctgc gtatcgtcta aatattcgac
     1441 cttatcctta ccaaacatcc gccgcgccat tgcgtgtgca tagttccaat gtttgccgcc
     1501 gacggtcagc agggcttcga ctttgtccaa cattgccgct gatgatgtcc gacgcagatg
     1561 cggtttgccg tgtgggttac cttttgcttt aggcttaaat ccgtgcgacc gcatatcagc
     1621 gacaacagac tcaagttcgg aaacatccat atccgcacac gaccgcttgc ccgtcacacg
     1681 ctccaacacc gcgcgatagg taccgtcgtc caagcccagc tccttttgag caatcttaat
     1741 tttcgcaatc aacgcccggc gcatctcaaa cccataaaac acaatatatt gactaattaa
     1801 cgcatattat accaataaaa tacaatatat agtattaagc cgatgttttt tgcgaaacgg
     1861 acagacataa aa
//
LOCUS       DAWITQ010000226         1848 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.226, whole genome shotgun sequence.
ACCESSION   DAWITQ010000226 DAWITQ010000000
VERSION     DAWITQ010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1848)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1848)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.226"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            205..1677
                     /gene="pyk"
                     /locus_tag="WIX18_002063"
     CDS             205..1677
                     /gene="pyk"
                     /locus_tag="WIX18_002063"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEZ5239105.1"
                     /translation="MNQTSRDLTRISHNTKIVATLGPGSNNVELLEDMIRVGGLNVVR
                     FNFSHGTPEFHQENARIVREAAKRAGQEIAIIADLQGPKIRVGKIAGGGIELNKGETL
                     VLDAALEGEGTREAVGLDYRDLPDDVTAGDVLWLDDGLLTLTVESVEGSRIITRVENS
                     HVLKSNKGINKRGGGLSAGALTEKDFRDLKTAIAIGCDYLAISFVKSAEDLHIARAKV
                     EEEMKGSTAVRPGLVSKIERVEAIENLDEIILAGDGIMVARGDLAVEVGHAAVPALQK
                     RMIRRARELRRFSITATQMMESMITNPVPTRAEVSDVANAVLDGTDAVMCSAETAVGA
                     YPFETVSQMAIICAATEKEQDSLNGVAEQVEYPEAVSTNLAVAGGAVSVARAVHAKAI
                     VALTESGSTAFEISRHNITLPIFALTPSVSAQRRMAMYRGVRPLILATSTDHDTALNE
                     VETMLVEHNILHSGDQYIITSGSQMRESGSTNTLEVLRVK"
BASE COUNT          476 a          537 c          499 g          336 t
ORIGIN      
        1 taaatttagc ctaagtcata aaaccgtgta attttgcgcc aaaaaaggcg gtttgcaggt
       61 aaaatatcaa actattaatt taaatcatat ttttacagaa tattccgccg cgttcatcaa
      121 atggacatca aaccggttcc aaatttctgt aattttgtaa caaaataccg caaaacaccc
      181 gattgagacc aaaaggactt tcatatgaac cagacaagcc gcgatctgac ccgcatcagc
      241 cacaacacca aaatcgtcgc caccttgggg ccgggcagca acaacgtcga actgttggaa
      301 gacatgatcc gcgtcggcgg tctgaacgtc gtccgcttca acttcagcca cggcacgccc
      361 gaattccatc aggaaaacgc ccgcattgtg cgcgaggcgg caaaacgcgc cggacaggaa
      421 atcgccatca ttgccgacct gcaagggccg aaaatccgcg tgggcaaaat cgccggcggc
      481 ggcatcgaat tgaacaaagg cgaaacgctg gtactggatg ccgcgctcga aggcgaaggc
      541 acgcgcgagg cggtcggttt ggactaccgc gacctgcccg acgacgttac cgcaggcgac
      601 gtattgtggc tggacgacgg cctgctgacc ctgaccgtgg aatccgtcga aggcagcagg
      661 attatcacaa gggtggaaaa cagccacgtc ctgaaaagca acaagggcat caacaaacgc
      721 ggcggcggtc tgtccgcagg cgcgttgacc gaaaaagact tccgcgacct gaaaaccgcg
      781 attgccatcg gttgcgacta tctcgccatc agctttgtga aatccgccga agatttgcac
      841 atcgcgcgcg ccaaagtcga agaagaaatg aaaggcagca cggccgtgcg ccccggtttg
      901 gtttccaaaa tcgaacgcgt agaagcgatt gaaaaccttg atgaaatcat cctcgccggc
      961 gacggcatta tggttgcacg cggcgacttg gcggtcgaag tcggacacgc cgccgtcccc
     1021 gccctgcaaa aacggatgat ccgccgcgcc cgcgagttgc gccgcttcag cattacggcg
     1081 acgcaaatga tggaatcgat gattaccaac cccgtgccga cccgcgcgga agtcagcgat
     1141 gtggcaaacg cggtattgga cggcaccgat gcggtgatgt gttccgccga aaccgccgtc
     1201 ggcgcgtatc cgtttgaaac cgtcagccaa atggcgatta tctgcgcggc tacggaaaaa
     1261 gagcaggatt cgctcaacgg cgttgccgaa caggtcgagt atcccgaagc ggtcagcacc
     1321 aacctggcgg ttgccggcgg tgcggtcagc gtggcgcgcg cggttcacgc caaagccatc
     1381 gtcgccctga ccgaaagcgg ttcgaccgcc tttgaaatca gccgccacaa catcaccctg
     1441 ccgattttcg cgctgacccc gagcgtttcc gcccaacgcc gtatggcgat gtaccgcggc
     1501 gtgcgcccgc tgattttggc aaccagcacc gaccacgaca cggcgttaaa cgaagtcgaa
     1561 accatgctgg tggaacacaa catcctgcat tccggcgacc aatacatcat taccagcggc
     1621 tcgcaaatgc gcgaatccgg ttcgaccaat acgctggaag tgctgcgcgt caaataatcc
     1681 gccctgagtg gaaaatgccg tctgaagtcg atgcccgagg cttcagacgg cattttttgc
     1741 ggcggcgcgg cggttcaggc aaactgaaaa aattgtgcaa atccggcaac atcagataaa
     1801 attgagtacc tatactaaag cgaaacaagg catttccgac tgcctttt
//
LOCUS       DAWITQ010000227         1836 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.227, whole genome shotgun sequence.
ACCESSION   DAWITQ010000227 DAWITQ010000000
VERSION     DAWITQ010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1836)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1836)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1836
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.227"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            31..243
                     /locus_tag="WIX18_002064"
     CDS             31..243
                     /locus_tag="WIX18_002064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease III domain protein"
                     /protein_id="HEZ5239106.1"
                     /translation="MELETVVPPEEGEGEGEGGDGEIPEYLELHSEREDDISAPSQAE
                     PPPRNIKPLVFGLLIAFLGYLLGKIF"
     gene            278..1789
                     /gene="ubiB"
                     /locus_tag="WIX18_002065"
     CDS             278..1789
                     /gene="ubiB"
                     /locus_tag="WIX18_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HEZ5239107.1"
                     /translation="MKWLKRLTVIVGTFYRYRLAGLCASLMGSGWICALLKMMPQSSK
                     LKNEPPAVRLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLS
                     REQIEKSLGQSIEKLYAEFETEPVASASIAQVHKARLHSGERVAVKVLRPNLLPLIEQ
                     DLSLMRFGAVWVERLFADGKRLKPLEVVAEFDKYLHDELDLMREAANAGQLGRNFQNS
                     NMLIVPKVFYDYCTSDVLTIEWMDGTPVADIAKLKADGIDLHKLADYGVEIFFTQVFR
                     DGFFHADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA
                     HIESGWVPADTRAEELEAAVRAVCEPVFNKPISQISFGLVLMRLFEVSRRFNVEIQPQ
                     LVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVKWMNGQVGPKALWRNLKNEAPDWAQ
                     IIPSLPRKISALIDENRQQEMRDAYIHLVKVQQRQSLWLAVIAVVLLLILLLK"
BASE COUNT          405 a          495 c          497 g          439 t
ORIGIN      
        1 cttgtcctga tttttgttaa tccactacat atggagttag aaacggtcgt gccgccggag
       61 gaaggggagg gcgaaggaga aggcggggat ggggaaatac ccgaatatct tgaacttcat
      121 agcgaacggg aagatgatat ttccgcacct tcgcaagccg aaccgccgcc ccgcaatatc
      181 aaaccgctgg ttttcgggct gctgatagcc tttttgggct atctgctcgg taagattttt
      241 tgattgtccg ataaatgctg tattcgggat tttatatatg aaatggttga aacgcctgac
      301 ggttattgtc gggacttttt accgctatcg gctggcaggt ctgtgcgctt cgctgatggg
      361 tagcggttgg atatgcgctc tgctgaaaat gatgccgcag tcgtccaaat tgaaaaacga
      421 accgcctgcc gtccgtctgc gccttgcctt ggaaagcctg gggccgattt tcatcaagtt
      481 cgggcaggtt ttgtccacac gccctgattt gattccgcac gattacgccg tcgaactggc
      541 aaagctgcaa gacaaagtgc cgccttttga cgcgcggctt tcgcgtgaac aaatcgaaaa
      601 atcgttgggt cagtccatcg aaaagctgta tgcggaattt gaaaccgagc ccgtcgccag
      661 cgcgtccatc gcccaagtac acaaagcccg cctgcattcg ggcgaacgag tggctgtcaa
      721 agttttgcgc cccaaccttt tgccccttat cgaacaggat ttgtcgctga tgcgtttcgg
      781 cgcggtttgg gtggagcgtc tgtttgccga cggcaagcgt ctgaagccgc tcgaagtggt
      841 ggcggagttc gacaaatacc tgcacgacga gttggatttg atgcgcgaag ccgccaatgc
      901 cggacagctc gggcgcaatt tccaaaacag caatatgctg attgtgccca aggtgtttta
      961 cgactactgc accagcgacg tgctgacaat cgaatggatg gacggcacgc cggttgccga
     1021 catcgccaaa ctcaaagcag acggcatcga tttgcacaaa ctcgccgatt acggcgtgga
     1081 aatctttttc acgcaggtct tccgcgacgg ctttttccac gcggatatgc accccggcaa
     1141 tattttggtt gccgccgaca accgctacat cgccctcgat ttcggcatcg tcggcacgct
     1201 gaccgattac gacaaacgtt atctcgccat caatttcctc gcctttttca accgcgatta
     1261 ccggcgcgtc gccaccgccc acatcgaatc gggctgggtg cctgccgaca cgcgtgcgga
     1321 agaattggaa gccgccgtcc gcgccgtgtg cgaaccggtg ttcaacaaac cgatttcgca
     1381 gatttccttc ggcttggtgc tgatgcgcct gtttgaagtc agccgccgct tcaatgtcga
     1441 aatccaaccg cagcttgtgc tgctgcaaaa aacgctgctc aacatcgaag gcttgggccg
     1501 ccagctcgat cccgatttgg acttgtggaa aaccgccaaa ccgtttttgg tgaaatggat
     1561 gaacgggcag gtcggcccta aagccctttg gcgcaacctc aaaaacgaag cccccgactg
     1621 ggcgcaaatc atcccttcat tgccgcgcaa aatcagtgcg ttgattgatg aaaaccgcca
     1681 gcaggaaatg cgtgatgcct atatccattt ggtcaaagtg cagcagcggc aaagcctgtg
     1741 gctggctgtg attgcggttg ttttgctgct gattttgctt ttgaaatagg ctttgtccga
     1801 atcatcgccc gactccgccc gtttataagg aaatcg
//
LOCUS       DAWITQ010000228         1825 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.228, whole genome shotgun sequence.
ACCESSION   DAWITQ010000228 DAWITQ010000000
VERSION     DAWITQ010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1825)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1825)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1825
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.228"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            1424..1717
                     /locus_tag="WIX18_002066"
     CDS             1424..1717
                     /locus_tag="WIX18_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239108.1"
                     /translation="MKTNDKLNRQIDVLQKQSAAIHNEAYIEMNTLLYRHREVVSVHN
                     RKADYAEKGKEQIALFPRGLNGITKLPAAVLLPERPYHFDMKEVLHIFSWIPR"
BASE COUNT          476 a          509 c          426 g          414 t
ORIGIN      
        1 aaatgaacat ttcgagcaag accttatccc ttacgccgtc cgtttcaggc tcaatcaaat
       61 ccttcccgaa ctcgactgcc attggcagga aaatctgaca gaaatcttca aaacactttc
      121 tcccgaagcc gggcaggccg cctgtacgca aatcctttcc cgaaaaggca taggctataa
      181 cgaagccgac ggttctttta cttaccttcc ccaaaaacgc atttcgtttt cttctttggc
      241 aacagacatt cccatccccg acctcaaacg gctggcgggg catattgcgg aacgcctgga
      301 tgtattggcg caatgcgaat cgccggttta tattgccgac attctcgaaa gcgtgctgtc
      361 cgttatcaaa aacgtcgata ccggaggcaa gcgcgcacgg gaaaatttca aacagattct
      421 gaaaaccgaa ttcatctacg ccgccgctgc ggtattgaaa aacaaaacca aatgggaaat
      481 ccccgaaaat acccgcaatc tcgattcgga catcatctgt acctatatct gcgaagtgtt
      541 cctaaaatcg cacctgctcg gcaacagttt tccgatgatg cgcccgcgcg aagtgaagca
      601 gatgcccgaa ccggtgtttg acaaagtatt gtttgccgaa cagcgcgccc gccagttgga
      661 agttatccga acgtcaaaat acatcttcgc catcgcgcct tattacaccg acgatattcc
      721 gttttccctg cgccgcttcc tgtcggaaga caaactttat accagctaca accgctatta
      781 caccgccatc catatccccg tccgcaacat cactcagaat gatgccctgc gttttgccaa
      841 cggtttgaaa cagattctct cgctgcaatc cggcgtgagc tgggaaatca tcgatatgat
      901 ggacaggata gaggaaaact acgacaaaaa agccctgccg ctgttgtttt cgccattccc
      961 cgcgcaagtc gaacgcacgc aggcgattgc cgccagattg gaccaattcg agcggctgtt
     1021 gggcgacacc gtcctcgatc cgttctacta ttgcctgacg cgtatggcga agggcgagga
     1081 agatttgaaa tatatttata tcgccttccg ccagtctttc ggcggcatct tcaattcgtt
     1141 tgaaaacttc cgcctgctgc ccgcgctgtg gatgagcagg gatgcggaaa atatgtccga
     1201 ccgcatgaac gcctatattt ccgcaatgga agaccgccgc cgcgagatat tgtccattcg
     1261 gcagggaaag cctgaagaag aattttcccg caagatggtc gtctgcctga tcgacttgga
     1321 aaattgtttg gaaaaacacc tcgaacagtt caagccggta tcggaaagca tcgaagcctg
     1381 taccgccaaa ctgcaggagc aaccgtcgtt cttcaacagg ctgatgaaaa ccaacgacaa
     1441 gctcaacagg cagattgacg tgttgcagaa acagtcggca gccatccaca acgaagccta
     1501 tatcgaaatg aacacgctgc tttaccgcca ccgcgaagtg gtttccgtcc acaaccgcaa
     1561 agcagattat gcggaaaagg gcaaagagca gattgcgctg ttcccgcgcg gattgaacgg
     1621 catcaccaag ctgcccgccg ccgtcctgtt gcccgagcgt ccctaccatt ttgatatgaa
     1681 ggaggttctg catatattct cctggatacc gaggtaggcg tatcggctgc cggataaaaa
     1741 tgcaccccgt cattcctgtc tgtacggggg tagcggcagt gttttcctgc ttcgttttat
     1801 agtggattaa caaaaaccag tacgg
//
LOCUS       DAWITQ010000229         1817 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.229, whole genome shotgun sequence.
ACCESSION   DAWITQ010000229 DAWITQ010000000
VERSION     DAWITQ010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1817)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1817)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1817
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.229"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(194..1363)
                     /locus_tag="WIX18_002067"
     CDS             complement(194..1363)
                     /locus_tag="WIX18_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEZ5239109.1"
                     /translation="MRKKLTALVLSALPLAAVADVSLYGEIKAGVEGRNYQLQLTEAQ
                     AANGGASGQVKVTKAKSRIRTKISDFGSFIGFKGSEDLGEGLKAVWQLEQDVSVAGGG
                     ATQWGNRESFIGLAGEFGTLRAGRVANQFDDASQAIDPWDSNNDVASQLGIFKRHDDM
                     PVSVRYDSPDFSGFSGSVQFVPIQNSKSAYTPAHVVVNNKVATHVPAVVGKPGSDVYY
                     AGLNYKNGGFAGNYAFKYARHANVGRNAFELFLIGSATSDQAKGTDPLKNHQVHRLTG
                     GYEEGGLNLALAAQLDLSENADKTKNSTTEIAATASYRFGNAVPRISYAHGFDLIERG
                     KKGENTSYDQIIAGVDYDFSKRTSAIVSGAWLKRNTGIGNYTQINAASVGLRHKF"
BASE COUNT          464 a          468 c          414 g          471 t
ORIGIN      
        1 tatatgtgca aaccaaaccg aaaatgcgaa ataccgtctg aaaatctttc agacggtatt
       61 tactgtcttt attgccgttt ttcttccgta tccggatttt tgtttggggc tgagcagatt
      121 ggcagtcaga ttgcaatcga agaatgaatg caagccgtca aaaacaaagc tatccgcttc
      181 accgccccga tatttagaat ttgtggcgca aaccgacgga ggcggcatta atttgagtgt
      241 agttgccgat gccggtattg cgtttcagcc aagcgccaga cacgatggcg gaagtgcgtt
      301 tggaaaaatc ataatcaacg ccggcgatga tttgatcgta gctggtattt tcgccttttt
      361 taccgcgttc gatcaagtcg aaaccatggg catagctgat gcgtggaact gcattaccga
      421 agcggtagga agcagtcgcg gcaatttcgg tcgtactgtt tttggttttg tcggcatttt
      481 cagacaaatc caactgagcc gccaaggcga gattcaagcc gccttcctca tagccgcccg
      541 tcaggcggtg tacctgatgg tttttcaagg gatcggtacc tttggcttga tcactcgtcg
      601 cgctgccgat caagaacaac tcaaaagcat tacgtccgac attggcgtgt ctcgcatatt
      661 taaaggcata gttcccggca aaaccgccat ttttgtaatt cagaccggca taatacacat
      721 ccgatccggg cttgccgaca acagccggaa cgtgagtagc aaccttgtta ttcacaacaa
      781 catgagccgg cgtataggcg gacttgctgt tttggatcgg aacgaattga acgctgccgc
      841 tgaaaccgga aaagtccgga gagtcgtagc gtacagaaac cggcatatcg tcgtggcgtt
      901 tgaaaatacc caattgcgaa gccacatcat tgttgctgtc ccaaggatca atggcttggc
      961 tggcatcgtc aaactgattc gcaacgcgac cggcgcgcag cgtaccgaat tcgcctgcca
     1021 agccgataaa ggattccctg ttgccccact gggtcgcgcc gccgccggca acggatacgt
     1081 cttgctcaag ctgccaaaca gctttcagac cttcgcccaa atcctcgctc cccttaaagc
     1141 cgataaacga gccgaaatca ctgattttcg tcctgatgcg gcttttggcc ttagtaactt
     1201 ttacctgacc gctcgctcca ccgttagcgg cttgtgcttc agtcaattgc agctggtagt
     1261 tcctgccttc cacgccggct ttgatttcgc cgtataggct gacatcggca acggccgcaa
     1321 gcggcagtgc ggacaatacg agggcggtaa gtttttttcg catatcggct tccttttgta
     1381 aatttgataa aaacctaaaa acatcgggca aacacccgat acgtcttcaa ttataccccc
     1441 cccccccgca aaaaaccatt tttcagaaca aatatctgat aaatgccgca acctttattt
     1501 taaaaatgat tatattttga tataaaacaa tagcttattt tttcaaaaac gttgtgtttc
     1561 tacaacacaa ttcaagcgca gacctcgtgc gagccgatgc gctgctgccc ggatgcagtc
     1621 tcggcttttt aaaacgccat aaaaaaacac acgcggcact ttatagtgga ttaacaaaaa
     1681 ccagtacggc gttgcctcac cttagctcaa agagaacgat tctctaaggt gctgaagcac
     1741 caagtgaatc gattccgtac tatctgtact gtctgcggct tcgccgtctt gtcctgattt
     1801 ttgttaatcc actataa
//
LOCUS       DAWITQ010000230         1790 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.230, whole genome shotgun sequence.
ACCESSION   DAWITQ010000230 DAWITQ010000000
VERSION     DAWITQ010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1790)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1790)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1790
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.230"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(148..804)
                     /locus_tag="WIX18_002068"
     CDS             complement(148..804)
                     /locus_tag="WIX18_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEZ5239110.1"
                     /translation="MKNKTKVWDFPTRLFHWLLAASLPFMWYSAKTGGDMLQWHTRVG
                     LFILFLLVFRLCWGIWGSDTARFSRFVRGWSGIREYMKNGIPEHVQPGHNPLGALMVV
                     ALLAAVSFQVGTGLFAADENTFSTNGYLNHLVSEHTGSLMRKIHLNFFKLLAVFSAIH
                     IAAVAAYRVFKKKNLVLPMITGFKYIEGKTSIRFAGKTALAAALSVAALAAAAILLLS
                     "
     gene            869..1759
                     /locus_tag="WIX18_002069"
     CDS             869..1759
                     /locus_tag="WIX18_002069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HEZ5239111.1"
                     /translation="MFPVFHLSGESRRRMLQAASRFPYVFKARAEDSHKGTFGTLAVV
                     GGSAGMSGAPVLAASAAMYLGCGKVWAGFNQDALPFAVIAGFPEIMLDTADGLTKRQG
                     INAWMVGCGLGTDKAAVGTLAGILAEHTDKPVLLDADALNILSTDAETRNLARGCKNL
                     ILTPHPAEAARLLGTTVAQVQADRTAAVRKIGAIFGATVVLKGHKTLVAASDTEIYVN
                     ESGNAGLATAGSGDVLGGIIGSLLAQGVPVFEAACAGAWLHGAAADVIKESAGIAAGL
                     LAGEIAPAARWLRNRITKSM"
BASE COUNT          402 a          421 c          588 g          379 t
ORIGIN      
        1 ccttgtcctg atttttgtta atccactata aaacggtttg ggacggaaaa acggcctgaa
       61 gccgtttcgg gcattcagac cgtttgcgcg gagaggggat gccgtccgaa gggcgaaaag
      121 ggcttcagac ggcattgatg tcgggtttca ggacaggagc aggatggcgg ctgcggcaag
      181 cgcggcaacc gataatgcgg cggcaagcgc ggttttgccg gcaaagcgga ttgaggtttt
      241 gccttcgatg tatttgaagc cggttatcat cgggaggacg aggtttttct ttttgaacac
      301 gcggtatgcg gcgacggcgg cgatatgaat ggcggaaaaa acggcgagca gcttgaaaaa
      361 gttgaggtgg attttccgca taaggctgcc cgtatgctcg gaaaccaaat ggttgaggta
      421 gccgttggtg ctgaaggtgt tttcatcggc ggcaaaaagc cctgtgccga cttgaaatga
      481 gacggcggcc aaaagcgcga cgaccatcag tgcgcccaag gggttgtgtc cgggttggac
      541 gtgttcggga ataccgtttt tcatatactc tctgataccc gaccatccgc ggacgaaacg
      601 ggagaaacgg gcggtatcgc tgccccaaat gccccagcag aggcggaata cgagcaggaa
      661 aaggataaac agcccgacgc gcgtgtgcca ttgcagcata tcgccgccgg ttttcgcgct
      721 ataccacata aagggtaggg atgcggcaag cagccagtgg aaaaggcggg tggggaagtc
      781 ccagactttg gttttgtttt tcataattgg tttccggcgg tagaatcggt ttgttttcga
      841 gccttaattt taaccgattg gaggggaaat gtttcccgtt ttccatcttt caggcgaaag
      901 ccgccgccgg atgcttcagg cggcatcgcg ttttccctat gttttcaaag cccgtgcgga
      961 agattcgcac aaagggactt tcggcacgct cgccgtagtc ggcggatcgg cagggatgag
     1021 cggcgcgccc gtattggcgg catcggcggc gatgtatctc ggctgcggca aggtgtgggc
     1081 gggtttcaat caggatgcgc ttccgtttgc cgtcattgcc ggttttcccg aaattatgtt
     1141 ggacacggca gacggtttga ccaagcgtca aggcataaac gcttggatgg taggttgcgg
     1201 cctgggtacg gataaagcgg cggtcggaac gcttgccgga attttggcgg aacacacgga
     1261 caagcccgtc cttttggatg cggacgcgct gaacatatta tcaaccgatg ccgaaacccg
     1321 aaatctggcg cgcgggtgta aaaacctgat tttaacgcca caccccgccg aagccgcgcg
     1381 cctgcttgga acgacggttg cacaggttca ggcggatcgg acggcggcag tgaggaagat
     1441 aggggcaatt ttcggcgcaa ccgtggtttt aaaggggcac aaaacattgg ttgctgcgtc
     1501 cgatacggaa atctatgtca acgaaagcgg caacgcggga ttggcaacgg cgggcagtgg
     1561 cgacgtattg ggcggcatca tcggcagtct gctcgcacag ggcgtgccgg tttttgaagc
     1621 cgcctgcgcg ggcgcgtggc tgcacggcgc ggcggcggat gtcataaaag aatcggcagg
     1681 cattgcggca gggctgttgg caggggaaat cgctccggcg gcaaggtggc tgcgcaaccg
     1741 gataactaaa agtatgtaag aagatatagt ggattaacaa aaaccagtac
//
LOCUS       DAWITQ010000231         1764 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.231, whole genome shotgun sequence.
ACCESSION   DAWITQ010000231 DAWITQ010000000
VERSION     DAWITQ010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1764)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1764)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1764
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.231"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..716)
                     /locus_tag="WIX18_002070"
     CDS             complement(<1..716)
                     /locus_tag="WIX18_002070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239112.1"
                     /translation="MFKKFKLVLLSFFALVFAFWLGTGIAYEINPRWFLSDTATEIPE
                     NPNAFVAKLARLFRNADRAVVIVKESMRTEESLAGAVDDGPLQSEKDYLALAIRLSRL
                     KEKAKWFHVTEQEHGKEVWLDYHIGEGGLVAVSLSQRSPEAFVNAEYLYRNDRPFSVN
                     VYGGTAHGENYETTGEYRVVWQPDGSVFDASGRGKIGEDVYEHCLGCYQMAQVYLAKY
                     RDVANDEQKVWDFREESNRIA"
     gene            complement(890..1339)
                     /locus_tag="WIX18_002071"
     CDS             complement(890..1339)
                     /locus_tag="WIX18_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239113.1"
                     /translation="MENRFEKIVKDIFSFTQFVSEAENEIPNQSSRYYDCWWELEILN
                     ASALEDWEISGKPEKWEKWTEKYQTEALQSVKHLFAEEVPENNIVCNISHFLHFADRA
                     EADIPNQSRSYAEYWWEMEMFKMSVLEDWERSGRPLNWEKWQRQYRS"
     gene            complement(1505..>1764)
                     /locus_tag="WIX18_002072"
     CDS             complement(1505..>1764)
                     /locus_tag="WIX18_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239114.1"
                     /translation="HFQITDESYKVKFSEYLFENKTENNSDGNPTANYFFEIIDDSYM
                     DWLKEESFGFFEKKYYKAYIFFFSDSVIEVISSTEPVFYSK"
BASE COUNT          494 a          434 c          297 g          539 t
ORIGIN      
        1 gcaatccggt tgctctcttc gcggaagtcc caaaccttct gctcatcatt cgcgacatcc
       61 cggtatttcg ccaaatatac ctgggccatc tgataacacc cgaggcaatg ctcataaaca
      121 tcttccccga ttttcccgcg ccccgacgca tcaaataccg aaccgtccgg ttgccaaaca
      181 acccgatatt ctcctgtcgt ttcataattt tctccgtgag ccgttccgcc gtacacattt
      241 acagaaaacg gacgatcgtt ccgatacaga tattcggcat taacaaacgc ttccggcgag
      301 cgttgcgaaa gcgaaaccgc aaccaaaccg ccctcgccga tatggtaatc cagccaaacc
      361 tctttcccat gttcctgctc cgttacgtga aaccatttcg ccttttcttt caaacgactg
      421 agccggatag cgagcgcgag ataatccttc tccgactgca acggaccgtc atccacagct
      481 ccggcaagac tttcctccgt cctcatcgat tccttcacga tgacaaccgc cctgtcggca
      541 tttcggaaca ggcgggcaag tttcgccaca aaagcattcg gattttcagg tatttcagtt
      601 gccgtatcgc tcaaaaacca acgcggatta atctcatagg caatacccgt ccccagccaa
      661 aaggcaaata caagggcaaa aaatgacaac aataccagtt tgaatttttt aaacatattt
      721 atttttcgtt taattcgttt aacaggatat atcgattata tcagacgagc tttgattgtt
      781 tgatttttaa tctaatctac gcttgctgcc gtactttaaa aaaacctatg caggctgcgg
      841 cttgttactc ttgtttgctt tgattcaaat tttcaactaa ttcaaatgct taagatcgat
      901 attgcctttg ccatttttcc caatttaacg gtcttcccga gcgttcccaa tcttctaaaa
      961 ccgacatttt gaacatttcc atttcccacc aatattcggc atatgaacgt gattgattgg
     1021 gaatgtcggc ttctgcccga tcggcaaaat gcaaaaaatg agaaatattg caaactatat
     1081 tattttcagg aacttcttcg gcaaatagat gcttgactga ctgtaacgct tcggtctgat
     1141 atttttctgt ccatttctcc catttttcag gctttcccga tatttcccaa tcttccaatg
     1201 cggaagcatt caagatttcc aattcccacc aacagtcgta ataacgggag gattggttag
     1261 gaatctcatt ttctgcttcg gaaacaaatt gggtaaaact aaaaatatcc ttaacgattt
     1321 tttcaaatct attttccata ggttgccgcc cctcccaatt gcgtgccaac aatttcggca
     1381 aaatcaagcc ggcaagcccc ggcatcctgt gctaatcgga gaaaatgccg tctgaaagcc
     1441 gaataccgct tcagacggca ttttgattgt tgggttttta atcagagctt tgtttgataa
     1501 tttgttattt tgaataaaat acaggttctg tcgagctgat aacttctatt acagaatcgc
     1561 taaaaaagaa aatgtaagcc ttataatatt tcttttcaaa aaaaccaaaa ctttcttctt
     1621 tcaaccagtc catataactg tcatctatta tctcgaaaaa ataatttgca gtaggatttc
     1681 catccgaatt attttctgtt ttattttcga ataaatattc tgaaaatttt actttataag
     1741 attcatctgt tatttgaaaa tgaa
//
LOCUS       DAWITQ010000232         1737 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.232, whole genome shotgun sequence.
ACCESSION   DAWITQ010000232 DAWITQ010000000
VERSION     DAWITQ010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1737)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1737)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.232"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            97..1470
                     /locus_tag="WIX18_002073"
     CDS             97..1470
                     /locus_tag="WIX18_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEZ5239115.1"
                     /translation="MSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLL
                     AAAQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSY
                     IKNLPLRHTVLFGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVLD
                     EADRMLDMGFIDDIRKIMQMLPKQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQN
                     TTNANVEQHIIAVDTIQKRNLLERLIVDLHMNQVIVFCKTKQSVDRVTRELVRRNLSA
                     QAIHGDRSQQSRLETLNAFKDGSLRVLVATDIAARGLDIAELPFVINYEMPAQPEDYV
                     HRIGRTGRAGADGVAISLMDESEQKMFESIKELTGNKLLIERIEGFEPQWWEQGGAKP
                     EKTEMREPRQRNRYESARAQREKNTRPETTANDAGAACGKIAGRSRRSRREHRTCALL
                     QPRYGVK"
BASE COUNT          443 a          565 c          411 g          318 t
ORIGIN      
        1 gccgccttgt cctgattttt gttaatccac tatatttccc cgtcctatcg gtttcccgtt
       61 tcagacgaca taaggtctga aagaaagact acaattatga gtaatccatt ttcctcttta
      121 ggtttgggta cggaactcgt ttccgcactg accgcgcaag gttacgaaaa cccgacgccc
      181 atccaagccg ccgccattcc caaagcactc gccggtcatg atttgctagc cgccgcgcaa
      241 accggcacag gcaaaaccgc cgcctttatg ctgcccagtc tggaacgcct caaacgttac
      301 gccaccgcca gcacctcgcc cgcgatgcac cccgtgcgta tgctcgtcct tacccccacg
      361 cgcgaacttg ccgaccaaat cgaccaaaac gtgcagtcct acatcaaaaa cctgccgctt
      421 cgccacaccg tcttgttcgg cggtatgaat atggacaaac agaccgccga tttgcgtgcc
      481 ggctgcgaaa tcgtcgtcgc caccgtcgga cggctgctcg accacgtcaa acaaaaaaac
      541 atcagtttga acaaagtcga aatcgtcgtt ctggacgaag cagaccgcat gttggatatg
      601 gggtttatcg acgacatccg caaaatcatg cagatgctgc ccaaacaacg ccaaaccctg
      661 ctcttttccg ctaccttctc cgcaccgata cgcaaactgg cgcaagactt catgaacgcg
      721 cccgaaaccg tcgaagtcgc cgcgcaaaac accaccaacg ccaacgtcga acaacacatc
      781 atcgccgtcg ataccattca gaagcgcaac ctgctcgaac ggctgattgt cgatttgcat
      841 atgaaccagg tcatcgtgtt ctgcaaaacc aaacaaagcg tcgaccgcgt aacgcgcgaa
      901 ctggtgcgcc gcaacctgtc cgcacaggcg atacacggcg accgttccca acaaagccgg
      961 ctcgaaacac tcaacgcctt caaagacggc agcctgcgcg tcctcgtcgc caccgacatc
     1021 gccgcgcgcg ggctggacat tgccgaactg cccttcgtca tcaattacga aatgcccgcc
     1081 cagcccgaag actacgtcca ccgcatcggg cgcacggggc gcgcgggcgc ggacggcgtg
     1141 gcgatttccc tgatggacga atccgaacag aaaatgtttg aatccattaa agagctgacc
     1201 ggcaacaagc tgctcatcga gcgcatcgag ggcttcgagc cgcaatggtg ggaacagggc
     1261 ggcgcaaaac cggaaaaaac cgaaatgcgc gaaccgagac aacgcaaccg ctacgaatcc
     1321 gccagggctc agcgcgaaaa aaatacccga ccggaaacca cggcaaacga tgcgggcgcg
     1381 gcttgcggaa aaattgccgg acgcagccgc cgaagccgtc gggaacaccg gacgtgcgcc
     1441 ctgctccaac cgcgttacgg cgtaaaataa ccctgaaaat caaatgccgt ctgaacattt
     1501 cccgtttcag acggcatttt tcaaaccgga ctgacgcatt gggagcaacc gcccgcaccg
     1561 gataaatttc ttccgcaaac agtttcagac ggcatttgct gcctgtacaa tatcatttcc
     1621 ttttccactc aaaccatcag gatttcccaa tgtccaccca attcgatgtc gccgtaatcg
     1681 gcgcaggtcc ggcaggctcg gtcgcatccg ccctgctccg caaaaaaggt tatagtg
//
LOCUS       DAWITQ010000233         1734 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.233, whole genome shotgun sequence.
ACCESSION   DAWITQ010000233 DAWITQ010000000
VERSION     DAWITQ010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1734
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.233"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            1..692
                     /locus_tag="WIX18_002074"
                     /pseudo
     CDS             1..692
                     /locus_tag="WIX18_002074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
     gene            737..1027
                     /locus_tag="WIX18_002075"
     CDS             737..1027
                     /locus_tag="WIX18_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239116.1"
                     /translation="MNIQLQGHIVGVKKFNGQIEGRSFDYCRLIVATPLDSSQGNALG
                     SSTTEYDFGGSANFEQFRNAQFPIEANLNVEIVTTGKTQKLKVIGFQLVKKG"
     gene            1032..1229
                     /locus_tag="WIX18_002076"
     CDS             1032..1229
                     /locus_tag="WIX18_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239117.1"
                     /translation="MQKVYVVQSVSTGDFLYLSPETGDIGHTKLITNADYFYDFEEAI
                     NAGLEEIGNQYEFVVFGFLKD"
     gene            1237..1521
                     /locus_tag="WIX18_002077"
     CDS             1237..1521
                     /locus_tag="WIX18_002077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239118.1"
                     /translation="MFGGRLKNAPSITAKHFLKENIMKFINTCRKYGAKLAVVTAVPL
                     ALATQANATLPDTAKNALEAAKADGMEAGWIVVGIFAALFVFSIVKRVMK"
     gene            1528..>1734
                     /locus_tag="WIX18_002078"
     CDS             1528..>1734
                     /locus_tag="WIX18_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239119.1"
                     /translation="MYYQVGNKCLEKHQAENLYFSLVVPRIKENGQIVRPEYNGSLWK
                     MSDGQPLRLLLAECSPKDNLQSGLE"
BASE COUNT          545 a          396 c          392 g          401 t
ORIGIN      
        1 aataaaggta tgtttacctg tcatcacgtc aaaccaaaag gcgaatgttt ggggtcagat
       61 tgggaagaag acgatgaagc caaaatgacc aaaggcaaga cctatggtat cggctcccgt
      121 gaatcgtcca aatatgtccg cgtctatgaa aaaggcaagc agttgggcga taaaacaagc
      181 acatggacgc gatttgaaat tgaattcaaa gcaaaagata tcgttatccc tttcgaagtt
      241 ttgcagaatc cgggcgaata tttcggcggc gcatatccga tttgcgaacg attcgtccaa
      301 aaggcaacgc gcatacacgc ggttaaggaa gataaggtca tttcagccga ccgctacctt
      361 gaatgggtaa aaaacagttc ggacgtgcgg caaacggtct gaaattcatt tttcccgaat
      421 tggacaaagc caaactgttt gaactgattg agccgagtca tcacaagctg cccaagtctt
      481 tggctcccga agcctacgac tgcgcctttt tgaaagctca agccattcat gaacagcccg
      541 cattcaaacc gtacaatgac ccttactata tgtacgaata ttacgagaat cttgaaaaac
      601 agcttgaaca gcaaaaacac gtcaacaatg aagaaagcta taacaacttc atttacgaca
      661 aattcgcaag actaccgatt tcatgggctt aaagtgtctg cccgaaagac gtttaatcac
      721 acaaggaaac caaaaaatga acatccaact tcaaggccac atcgtcggcg ttaaaaaatt
      781 caacggacaa atcgaaggca ggagcttcga ctattgccgc ctgattgtcg ccacaccctt
      841 agacagctcc caaggcaacg cattgggcag ctctactact gaatacgatt tcggcggctc
      901 tgccaatttc gagcagttcc gaaacgccca atttccgatc gaagcaaacc tgaacgtaga
      961 aatcgttact acgggcaaaa cccaaaaact gaaagtcatc ggttttcaac tcgtgaagaa
     1021 aggctgattg aatgcagaaa gtctatgttg tccagtccgt atcaacaggg gactttctgt
     1081 atctctctcc tgaaacgggc gacatcggac ataccaaatt aatcaccaat gccgattatt
     1141 tctacgactt cgaagaagcg attaacgcag gtttggaaga aatcggcaac caatacgaat
     1201 ttgtcgtatt cggatttttg aaagactgat tttcggatgt tcggcggtcg tctgaaaaac
     1261 gctccatcca ttaccgccaa acactttttg aaggaaaata tcatgaaatt tattaacacc
     1321 tgccgtaaat acggcgcaaa actggctgtt gtaacagctg tcccgctggc tttggcgaca
     1381 caggcaaatg caacgttgcc cgatacggca aaaaacgctt tggaagccgc aaaagccgac
     1441 ggtatggaag ccggttggat tgtagtgggc attttcgccg cgctttttgt cttttccatc
     1501 gttaagagag tgatgaagta agacggcatg tactaccaag tcggaaataa atgtcttgag
     1561 aagcaccagg ctgaaaacct ttatttcagc ttggtagtac caagaatcaa agaaaacgga
     1621 cagattgtca ggccggaata taacggcagc ctgtggaaga tgtcggacgg tcagccgcta
     1681 aggcttttat tggcggaatg cagtccgaaa gacaacctgc aaagcggtct tgaa
//
LOCUS       DAWITQ010000234         1734 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.234, whole genome shotgun sequence.
ACCESSION   DAWITQ010000234 DAWITQ010000000
VERSION     DAWITQ010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1734
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.234"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            356..1660
                     /locus_tag="WIX18_002079"
     CDS             356..1660
                     /locus_tag="WIX18_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HEZ5239120.1"
                     /translation="MKKHIWAASLLPASLSAEPLNWWKPYSAVNSGDTAWVMTAAALV
                     LLMTLPGLALFYGGMVRKKNLLSTMMHSFSIATLVGILWVAVGYSLAFTPGNAFIGGL
                     GRVFLSGMQIDAAAQMLTVSPNAPTVPEPVFMFFQMTFAIISTAIITGAFAERMKYSA
                     MMLFSGIWFLLVYVPGAHWVWGGGFMSKGGVLDYAGGTVVHINAGIAGLVAALVLGRR
                     IGYGREAMPPHNMAMTLIGAAMLWFGWFGFNAGSALAADAAAGMAMAVTQVSAVFGAA
                     GWLACEKIAGHKPSALGLASGAVSGLVGITPAAGFTGPSGAAAIGILTAAACFVSVTV
                     VKHKLRYDDSLDAFGIHGFGGLVGGILTGIFFDNRIFGGDAAVWQQLWIQVKDGVVMA
                     AYSGLMSWAILKVVGKICGGLRVGKDVEREGLDLNIHGERVE"
BASE COUNT          357 a          434 c          511 g          432 t
ORIGIN      
        1 aattaaaaat ttttaatata ttaatcaata aattaatttt ataaaataaa aatattgtca
       61 acaatatttt gccttatcgc ccaaacctct gtatattttc ctacagtaaa ttgttgacaa
      121 tccatacgcc cacatatgcg ccgcctaagg ataaatcctc ccgccggaca acgggtgcaa
      181 gggattggat gcgatatttc catattcaaa caagggattt gtttcacgca cagggcggca
      241 catcggcaaa atccccgcgc cgccccggtc cagcagggct tgcgtccctc ccggacaagc
      301 cccgaccccg cctttccgaa agacgggctc aaccattaag gaaactttaa tcaaaatgaa
      361 aaaacacata tgggcggcat ctttgctgcc ggcatcccta tcggcagaac ctttaaactg
      421 gtggaagcct tattccgccg tcaattcggg cgataccgcc tgggtgatga ctgcggctgc
      481 cttggtactg ttgatgacgc ttcccgggct ggctttattc tacggcggta tggtgcggaa
      541 aaaaaacctg ctctcgacga tgatgcacag cttttccatc gcgacattgg tgggcatcct
      601 ttgggtcgcc gtcggctatt ctttagcgtt cacgccggga aatgccttta tcggcggttt
      661 ggggcgcgta tttttaagcg ggatgcagat agacgctgcc gcacagatgc tgaccgtgtc
      721 gcccaatgcg ccgactgttc ccgaaccggt atttatgttt tttcagatga cgtttgccat
      781 tatttcgacc gccattatta ccggcgcgtt tgccgaacgg atgaaatatt cggcaatgat
      841 gctgttttcg ggcatatggt ttttattggt ttatgtgccg ggcgcgcatt gggtgtgggg
      901 cggcggcttt atgagcaagg gcggcgtatt ggattatgcc ggcggtacgg tggtgcacat
      961 caatgccggt atcgcgggac tcgtcgccgc cttggttttg ggcaggcgca taggctacgg
     1021 gcgcgaggcg atgcctccgc acaatatggc gatgacactg atcggcgcgg caatgttgtg
     1081 gttcggctgg ttcggcttta acgccggatc ggcgcttgcg gcagacgcgg cggcgggtat
     1141 ggcgatggcg gtaacgcagg tgtcggccgt attcggcgcg gcaggctggc ttgcctgcga
     1201 aaaaatagcg ggacacaaac cttccgcttt ggggctggct tccggcgcgg tttccggtct
     1261 ggtcggcatc acccctgccg ccggctttac cggcccgtcg ggcgcggccg ccatcggtat
     1321 attgactgcc gccgcgtgct ttgtgtccgt caccgtcgtc aaacacaaat tgcgttacga
     1381 tgattctttg gacgctttcg gcatacacgg attcggcggg ctggtgggcg gaatattgac
     1441 cggcatcttt ttcgacaacc gcattttcgg cggggatgcg gcagtttggc agcagttgtg
     1501 gatacaggta aaagacgggg tcgttatggc ggcatacagc gggctaatga gttgggcgat
     1561 tttgaaggtc gtggggaaaa tctgcggcgg cctgcgcgtc ggcaaggatg tcgaacgcga
     1621 aggtttggat ctgaatatcc acggcgaacg cgtggaataa gggcggctat gccgtctgaa
     1681 gcctgaaaat cgggtttcag acggcatttt tcacgtttgc cgccgatgga taaa
//
LOCUS       DAWITQ010000235         1696 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.235, whole genome shotgun sequence.
ACCESSION   DAWITQ010000235 DAWITQ010000000
VERSION     DAWITQ010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1696)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1696)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1696
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.235"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(337..1326)
                     /gene="porB"
                     /locus_tag="WIX18_002080"
     CDS             complement(337..1326)
                     /gene="porB"
                     /locus_tag="WIX18_002080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric porin PorB"
                     /protein_id="HEZ5239121.1"
                     /translation="MKKSLIALTLAALPVAAMADVTLYGTIKAGVETSRSVAHNGAQA
                     ASVETGTGIVDLGSKIGFKGQEDLGNGLKAIWQVEQKASIAGTDSGWGNRQSFIGLKG
                     GFGKLRVGRLNSVLKDTGDINPWDSKSDYLGVNKIAEPEARLISVRYDSPEFAGLSGS
                     VQYALNDNAGRHNSESYHAGFNYKNGGFFMQYGGAYKRHQNVDNVKIEKYQIHRLVSG
                     YDNDALYASVAVQQQDAKLVKDNSHNSQTEVAATLAYRFGNVTPRVSYAHGFKGSFDD
                     ADYTNDYDQVVVGAEYDFSKRTSALVSAGWLQEGKGESKFVSTAGGVGLRHKF"
BASE COUNT          479 a          379 c          416 g          422 t
ORIGIN      
        1 aatgctaagg caatttatcg ggaatgactg aaactcaaaa aactagattc ccactttcgt
       61 gggaatgacg gcatattttg acattgaata aaaaagacta aaaacaggaa aaagccaaac
      121 agaaaacagc gaaacagaaa aaagccaaac agaaaacagc gaaacagaaa aaagccaaac
      181 agaaaaaagc caaacagaaa acagaaaaca gccaaacaga aaacagccaa acagaaaaca
      241 gccaaacaga aaacagccaa acagaaaaca gccaaacaga aaacagaaaa aagcctgtct
      301 ggcgacaggc tttttgttga taccaatctt tgcagattag aatttgtggc gcagaccgac
      361 accgccggca gtcgatacga atttgctttc gcctttgcct tcttgcaacc aaccggcaga
      421 aaccaaggca gaagtgcgtt tggagaagtc gtattccgca ccgacaacca cttggtcgta
      481 atcgttggtg tagtctgcat catcaaacga gcctttgaag ccgtgggcgt aagaaacgcg
      541 gggcgttacg ttgccgaagc ggtatgccaa ggtagcggca acttcggttt gagagttgtg
      601 cgaattgtct ttaaccagtt tcgcgtcttg ttgctgtacg gctacggaag cgtacagggc
      661 atcattgtcg taaccgctga ccaaacggtg aatctggtat ttctcaatct tcacgttatc
      721 cacattctga tgtcttttat aggcaccgcc atattgcatg aagaagccgc cgtttttgta
      781 gttgaagccg gcgtggtaag attcgctgtt atgtctgcct gcattgtcgt taagcgcgta
      841 ttgtacgctg ccgctgaggc cggcaaattc gggagaatcg tagcgtacgg aaatgaggcg
      901 tgcttcgggt tcggcaattt tgtttacacc caaatagtcg cttttgctat cccaaggatt
      961 gatgtcgccg gtgtctttca ggacgctgtt caaacggccg acgcgcaatt taccgaagcc
     1021 acctttcaaa ccgatgaagg attggcggtt gccccaaccg gagtcagtac cggcgataga
     1081 tgccttttgc tcaacctgcc aaatggcttt cagaccgtta ccgaggtctt cttggccttt
     1141 gaagccgatt ttcgaaccca aatcaacgat gccggtaccg gtttcaacgc tagccgcctg
     1201 agctccattg tgagctacgg agcgggaagt ttctacgccg gctttgatgg tgccgtacag
     1261 ggtaacgtca gccattgctg caacaggaag ggctgccaaa gtcagggcaa tcagggattt
     1321 tttcattgct gtattccttt tttggttaag aaatttaagc cggccgggct ttccaagccg
     1381 cttagctttg catttaccgc cgacgttttc ggcgattcca tgtctgaaac tatagatgtt
     1441 cctgtctgaa aaaacaaact tctgcctgtt tttgtgtgga attcgatgtg tattttgaag
     1501 ggcggataga gatattatgg gtattttttg ttttataaca tatggttatt taaatttttt
     1561 aagatttgca tttttacaac acttactcgg gagggtattg gagggcattg caaaccgggg
     1621 gttataaaga cagcaaaaaa cgcgcacgtg gtttctttcg gaacgggcgg atgcaaaacc
     1681 cgcccctgcg gcagga
//
LOCUS       DAWITQ010000236         1674 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.236, whole genome shotgun sequence.
ACCESSION   DAWITQ010000236 DAWITQ010000000
VERSION     DAWITQ010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1674)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1674)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1674
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.236"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..687
                     /locus_tag="WIX18_002081"
     CDS             <1..687
                     /locus_tag="WIX18_002081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin"
                     /protein_id="HEZ5239122.1"
                     /translation="VYAAGWTAPLIGTAGKLAISTCMANPSGCTVMVTQAAEAGAGIA
                     TGAVTVGNAWEAPVGALSKAKAAKQAAPKETINNLANLAKAEQQILFRIAQRDTQLDA
                     WKTGFNNRVRKGAGLLDASNIPITINGKTIKPVQAISLKGAPVYSGVSEQEIFALYRQ
                     MTGQNPNFRVLPDGRLANGIISTGEWAGTKIALRNFSKTENSTQARWTLDLQNPPSFI
                     KGTKLELKFQ"
     gene            706..1080
                     /locus_tag="WIX18_002082"
     CDS             706..1080
                     /locus_tag="WIX18_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF596 domain-containing protein"
                     /protein_id="HEZ5239123.1"
                     /translation="MDEKQKIKILDFQIDLSSIFNSYKNQMGINIQDKNLKNNFCSFM
                     EELLNDGSIRLHDYTDGIGIPLTGTSKEQVQKLKDIWPTLEDAQAIWPEDPWYYLEWL
                     WWDIACPIDLADLPNIDIYEQA"
     gene            1439..>1674
                     /locus_tag="WIX18_002083"
     CDS             1439..>1674
                     /locus_tag="WIX18_002083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HEZ5239124.1"
                     /translation="MLKTPPTLAAELSGKTGVSISAPYANENSRILLSTTDISSENGK
                     IKIQSYGDQYYYARQSELYTFERRSYKTGKWYNR"
BASE COUNT          522 a          346 c          374 g          432 t
ORIGIN      
        1 gtttatgctg caggttggac agctccgctg atcggtacag cgggtaaatt agctatcagc
       61 acctgtatgg ctaatccttc tggttgtact gtcatggtca ctcaggctgc cgaagcgggc
      121 gcgggaatcg ccacgggtgc ggtaacggta ggcaacgctt gggaagcgcc tgtgggggcg
      181 ttgtcgaaag cgaaggcggc caagcaagct gctcctaaag aaacaataaa caatttggca
      241 aatttagcca aagcagaaca gcagatttta ttccgtattg cccaacgcga tacgcaactg
      301 gatgcatgga agacgggatt taacaataga gtaaggaaag gagcaggctt gcttgatgca
      361 agtaatattc cgataaccat taacggaaaa accatcaaac ctgtacaagc cataagctta
      421 aagggagcac ccgtttacag cggcgtaagc gaacaggaga tttttgcgct ttatcggcag
      481 atgactggcc agaatccgaa ttttagagtt ttgcctgacg gaagattagc aaatggcatt
      541 atcagtactg gagaatgggc aggaacaaaa attgcattaa gaaatttttc aaaaacagag
      601 aattcaactc aagcacgatg gacattagat ttgcagaatc ctccatcatt tattaaaggt
      661 actaaattgg agcttaaatt ccaataattt acaaaggatt ttaccgtgga tgagaaacaa
      721 aaaattaaga ttcttgattt tcaaatcgat ttatcctcaa tttttaactc ttataaaaat
      781 caaatgggta ttaatattca agataaaaac ttaaaaaaca atttctgttc ttttatggaa
      841 gaactgttaa atgacggttc aatccgttta catgattata ccgacggtat cggaattcct
      901 ctaactggaa cttcaaaaga acaagtgcag aaattgaaag acatatggcc tactttggaa
      961 gatgcccaag caatatggcc tgaagaccct tggtattact tagaatggct ttggtgggat
     1021 attgcgtgtc caatagattt ggccgatttg ccgaatattg atatttatga gcaagcgtag
     1081 gtatggttag ccgcctttag cggcgtaacc gtacgcatat cagcaaactt tataaaataa
     1141 caaggccgtc tgaaatctgt ttttcaactt tttcagacgg ccttgcaact tggcatttca
     1201 ttcgtacggt tacgccgcta aaggcggcta accgtaccta cgagctctga taaaaatgat
     1261 ttatggaagc aagctgtagc ctgcatgaaa cctaaaatcc atgcgtaagg tgtgtgcttc
     1321 agcgcgcacg cgttccatga tttacggctc aatgccgtct gaaaagctca attttttcag
     1381 acggcatttg ttatgcaagt aaatattcag attccctata tactgcccag acgcgtgcgt
     1441 gctgaagaca cctcctacgc ttgctgcaga actttcgggt aaaaccggtg tgagcattag
     1501 cgcaccgtat gccaatgaga acagtcgcat cctgctcagc accacggata tcagttcgga
     1561 aaacggcaaa atcaaaattc aatcttacgg tgaccaatat tactatgcga gacagagcga
     1621 actctatacc tttgaacgcc gcagctacaa aaccggcaaa tggtacaacc gcaa
//
LOCUS       DAWITQ010000237         1667 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.237, whole genome shotgun sequence.
ACCESSION   DAWITQ010000237 DAWITQ010000000
VERSION     DAWITQ010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1667)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1667)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1667
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.237"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..405
                     /locus_tag="WIX18_002084"
     CDS             <1..405
                     /locus_tag="WIX18_002084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ5239125.1"
                     /translation="GYTYNKSRYRNAAEVNAERLAKNSSADPYNFSNFTPVHIFRFGT
                     SFHIPNTGLTVGGGVSAQSSTSSLYNIRQGGYGLIDGFVRYELGKHAKLSLIGTNLNG
                     RTYFENNYNRTRGANNFYGEPRTVSMKLDWQF"
     gene            548..1606
                     /gene="dinB"
                     /locus_tag="WIX18_002085"
     CDS             548..1606
                     /gene="dinB"
                     /locus_tag="WIX18_002085"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEZ5239126.1"
                     /translation="MSSRKIIHIDMDAFYASVELREQPHLKGRPVVVAWEGARSVICA
                     ASYEARQFGLHSAMSVATAKRLCPQAVYVPPHFDLYRQVSAQIHAVFRRYTDLIEPLS
                     LDEAYLDVTRNFKNIPYASEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPN
                     GQFVLPPHKVMAFLETLPLGKIPGVGKVTLKKMQSLGMRTAGDLRRFERGELLNHFGR
                     YGYRLYDLARGTDERPVKAERERLQISTEITLPEDLPLEQAAGHLPHLAEDLWRQITR
                     KNVEAQSVTLKLKTYDFRIITRTLTYSSVLPDCASLLQAAQMLMARVPPQTEDAFRLI
                     GIGVGHLVPKNQQQDLWA"
BASE COUNT          391 a          465 c          454 g          357 t
ORIGIN      
        1 ggttatacct acaacaagag caggtatagg aatgcagccg aagtcaacgc cgaacgcctt
       61 gccaaaaatt ccagtgcaga cccgtacaac ttcagcaatt tcacacccgt gcatatattc
      121 cgtttcggaa cgagtttcca tataccgaat acggggctga ccgtcggcgg cggcgtgtcc
      181 gcacaaagca gcacaagcag cctgtacaac atcaggcagg gcggctacgg gctgatagac
      241 ggtttcgtcc gttacgaatt gggcaaacac gccaaattga gcctcatcgg tacgaactta
      301 aacggacgca cttattttga gaacaactac aaccgtacgc gcggcgcaaa caacttctat
      361 ggagagccgc gcactgtcag catgaaactg gattggcagt tttaattgaa aaccgtagtt
      421 ttgcggatgc cgtctgaaca gggtatgttt cagacggcat ttttatggag gcaggcctat
      481 cggggcgtat atttggaatt tgctcgatgc cggcagtaga atatcctttt tatcttcagc
      541 agagccgatg tcttcacgca aaatcatcca catcgacatg gacgcgttct acgcatcggt
      601 agagctgcgc gaacagccgc atttgaaagg gcggccggtg gtcgtcgcgt gggagggcgc
      661 gcgttcggtg atttgcgccg catcgtatga ggcacggcag ttcgggctgc attccgcgat
      721 gtcggtggca acggcgaaaa ggctgtgtcc gcaagcggtg tatgtgccgc cgcatttcga
      781 tttgtaccgt caggtttccg cgcagattca cgccgtattc aggcgttata ccgatttaat
      841 cgaacccttg tcgctggacg aagcctatct tgacgttacc cgtaatttca aaaacatccc
      901 ttacgccagt gaagttgcca aagaaatccg tgccgccatt tttgcggaaa caggtttgac
      961 tgcatccgca ggcatcgcgc cgaacaaatt tctggcgaaa atcgcgtcgg actggcgcaa
     1021 gccgaacggg cagtttgtgt tgccgccgca caaagtcatg gcatttttgg aaaccctgcc
     1081 tttgggcaaa atccccggcg tgggcaaggt aacgctgaaa aaaatgcagt cgctgggtat
     1141 gcggacggcg ggcgacttgc gccgtttcga gcgcggcgag ctcttaaacc atttcggacg
     1201 ctacggctac cgcctctatg atttggcgcg cggtacggac gaacgccccg tcaaagccga
     1261 acgcgaacgc ctccaaatct ccacagaaat taccctgccc gaagacctgc cgctcgagca
     1321 ggctgccgga cacctccccc atcttgccga agacttgtgg cggcaaatca cgcgcaaaaa
     1381 cgtcgaagcc caaagtgtaa cgctcaagct gaagacctac gatttccgca tcatcacgcg
     1441 cacgctgact tattcctccg tattgcccga ctgcgcctcc ctgcttcagg cggcgcaaat
     1501 gttgatggcg cgcgtcccgc cgcagacgga agacgcgttc cgccttatcg gtatcggcgt
     1561 ggggcatctt gtgccgaaaa accagcagca ggatttgtgg gcgtaaaccg ctttacgcgc
     1621 gccgtccaaa aaatatgccg tctgaacggt tttcagacgg catggct
//
LOCUS       DAWITQ010000238         1655 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.238, whole genome shotgun sequence.
ACCESSION   DAWITQ010000238 DAWITQ010000000
VERSION     DAWITQ010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1655)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1655)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1655
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.238"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(51..482)
                     /locus_tag="WIX18_002086"
     CDS             complement(51..482)
                     /locus_tag="WIX18_002086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239127.1"
                     /translation="MKNNIFLNLNKKSINNNHFVISIFFETIYQFETKDTLLECFKNI
                     TTTGHFGVIGAQYEKIDATRWIGDYEEVNGFEYIDKAPSIYFSVGDDFNPEELIIPIN
                     LAYHYFNIAISDFLIAHPEYQKKCKEIQKTYSQTNCSLHET"
     gene            complement(498..>1655)
                     /locus_tag="WIX18_002087"
     CDS             complement(498..>1655)
                     /locus_tag="WIX18_002087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HEZ5239128.1"
                     /translation="GAIGAAVGEIVGEALTNGKNPDTLTAKEREQILAYSKLVAGTVS
                     GVVGGDVNAAANAAEVAVKNNQLSDKEGREFDNEMTACAKQNNPQLCRKNTVKKYQNV
                     ADKRLAASIAICTDISRSTECRTIRKQHLIDSRSLHSSWEAGLIGKDDEWYKLFSKSY
                     TQADLALQSYHLNTAAKSWLQSGNTKPLSEWMSDQGYTLISGVNPRFIPIPRGFVKQN
                     TPITNVKYPEGISFDTNLKRHLANADGFSQKQGIKGAHNRTNFMAELNSRGGRVKSET
                     QTDIEGITRIKYEIPTLDRTGKPDGGFKEISSIKTVYNPKKFSDDKILQMAQNAASQG
                     YSKASKIAQNERTKSISERKNVIQFSETFDGIKFRSYFDVNTGRITNIHPE"
BASE COUNT          460 a          308 c          275 g          612 t
ORIGIN      
        1 gtaaatcatg gaacgcgtgc gtgctgaagc acacacctta cgcatggatt ttaggtttca
       61 tgcaggctac agtttgtttg agaatatgtt ttttgtattt ctttacactt tttttgatat
      121 tcagggtgag ctattaagaa atcagatatt gcaatattaa agtaatgata tgctaaatta
      181 ataggtataa ttaattcttc aggattgaaa tcatctccaa ctgaaaaata aatagaagga
      241 gctttatcaa tatactcaaa tccatttacc tcttcataat ctccaatcca tctggtagca
      301 tctatttttt catattgagc acctattact ccaaaatgtc cggtagttgt aatattttta
      361 aaacactcta aaagcgtatc tttagtttca aattggtaaa ttgtttcaaa aaaaatcgaa
      421 ataacaaaat ggttgttatt tatagatttt ttatttaagt ttagaaaaat attatttttc
      481 ataatttttc ctttaaatta ttctgggtga atgtttgtaa ttcttcctgt atttacatca
      541 aaatatgatc taaatttgat tccgtcaaag gtttctgaga attgaatgac attttttctt
      601 tccgatattg atttagttct ttcattttga gcaattttag aggcttttga atatccttgt
      661 gaagcagcat tttgagccat ttgaagtatt ttatcatcag aaaatttttt aggattataa
      721 acagttttta tacttgaaat ttccttaaat ccaccatcag gtttacctgt cctgtctagt
      781 gtaggaatct catatttaat tcgggtaatg ccttcaatat cagtttgggt ttcagatttt
      841 acgcgtcctc ctcgtgaatt tagttctgcc ataaaattgg tgcggttatg ggctccttta
      901 atgccctgtt tttgactaaa accatcagca tttgccagat gtctttttag gtttgtatcg
      961 aaactgatgc cttccgggta tttgacatta gtaataggtg tattttgttt tacaaaccct
     1021 cttggtattg gaatgaatct aggattaact cctgaaataa gtgtataacc ttggtcggac
     1081 atccattcgg ataaaggctt tgtattgccc gattgaagcc aagatttagc agcagtattc
     1141 aaatgataag actgtaaagc caaatctgct tgggtgtaag atttgctgaa taatttatac
     1201 cattcatcat ctttaccaat tagacctgct tcccaagatg aatgaaggct tctactatcg
     1261 atcaaatgtt gttttctgat tgttctacat tcagtactac gggatatatc cgtacatatt
     1321 gcaatcgaag cagcaagtct tttatcagca acattttgat acttttttac agtatttttt
     1381 ctgcacagtt gaggattatt ctgtttggcg catgcagtca tttcgttatc aaattctcta
     1441 ccctctttgt cgctaagctg attatttttc accgctacct cagccgcatt cgccgccgca
     1501 tttacatcgc cgccgaccac accgcttacc gtaccggcaa ccagtttgct gtatgccaaa
     1561 atctgttcgc gttctttagc tgtcaaagtg tcaggatttt tgccgtttgt caaagcctcc
     1621 ccgactatct cgcccacagc cgcacctatc gcacc
//
LOCUS       DAWITQ010000239         1629 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.239, whole genome shotgun sequence.
ACCESSION   DAWITQ010000239 DAWITQ010000000
VERSION     DAWITQ010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1629)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.239"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..>1629
                     /locus_tag="WIX18_002088"
     CDS             <1..>1629
                     /locus_tag="WIX18_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HEZ5239129.1"
                     /translation="GSNIETLQLPSFTGPVAPVLSAPGGYIADIPKGNLKTEIEKLAK
                     QPEYAYLKQLQVAKNINWNQVQLAYDKWDYKQEGMTPAAAAVVVIVVTVLTYGALSAP
                     AAAGTAGAAGAGAGGAAAGTAAGTGVAAGTAATTGVAAGTSAAAITTAAGKAALASLA
                     SQAAVSLINNKGDINHTLKELGKSSTVRQAATAAVTAGVLQGISGLNTQAAEAVSKHF
                     HSPAAGKLTANLINSTAAASVHTAINGGSLKDNLGDAALGAIVSTVHGEVASKIKFNL
                     SEDYIAHKIAHAVAGCASAVANKGKCRDGAIGAAVGEMVGETLLDGRDVGKLSPQERQ
                     KVIAYSQIIAGSVVALVKGDVNTAANAATVAVENNSLLARRRVNIRWTPRQELEHEYA
                     ILEIQAITNQIRRLDPKFNGIAILRTPGEPWTRHDVQTYRQYYNQLRESRGFAVDPIY
                     RIRINNGNEFNRIMSSKYPYNELYVANPKSATGYFRVDSYNPATEEIISRKFTQFSQI
                     QESTGIGYIKEAVRKYSPGAVISNVPSTPTTIRGR"
BASE COUNT          489 a          420 c          418 g          302 t
ORIGIN      
        1 ggcagtaaca tcgaaacctt gcaattgccg agtttcaccg gtcccgttgc gcccgtactg
       61 tccgcacccg gcggctatat cgccgacatc cccaaaggca acctcaaaac cgaaatcgaa
      121 aaactcgcca aacagcccga gtatgcttat ttaaaacagc ttcaagttgc gaaaaacatc
      181 aactggaatc aggtgcagct tgcttacgat aaatgggact acaaacagga gggcatgaca
      241 cccgcagcag cagctgtcgt cgttatcgtc gtaactgtat tgacctacgg cgcactgtcc
      301 gccccggcag ccgccggaac ggcgggcgcg gcaggcgcag gagcgggagg agccgcagca
      361 ggaacggcag ccggaactgg agtagcagca ggaacggcag ccacaaccgg agtagcagca
      421 ggcacatcag ctgcagctat caccacagcc gcaggcaaag ccgcactggc cagtctcgcc
      481 agccaagccg cagtttccct catcaacaac aaaggagaca taaaccatac cctgaaagaa
      541 ctgggcaaaa gcagcaccgt cagacaggcc gccaccgccg ccgtaaccgc aggcgtactg
      601 cagggcataa gcgggctgaa cacccaagca gccgaagccg tcagcaaaca ttttcacagt
      661 cccgcagcag gcaaactgac cgctaacctg atcaacagca ccgctgccgc aagtgtccat
      721 accgccatca acggcggcag cctaaaagac aacttgggcg atgccgcact gggtgcgata
      781 gtcagtaccg tacacggaga agtagcgagc aaaatcaaat ttaatctcag cgaagactac
      841 attgcccaca agatagccca tgccgtagca ggctgtgcat cggcggtagc aaataaaggc
      901 aaatgtcggg acggcgcaat cggcgcggca gtcggcgaga tggtgggaga aaccctgttg
      961 gacggacgcg atgtaggcaa actgtcaccc caagaacgcc aaaaagtcat agcctactcg
     1021 cagattatcg caggcagcgt agtggcattg gttaaagggg atgtgaatac ggcggcgaat
     1081 gcggctactg tggcagtgga gaataatagt cttttagctc gcaggagggt aaatatacgt
     1141 tggactccgc gacaagaatt ggaacatgaa tatgccattc ttgaaatcca ggccattacc
     1201 aatcaaatcc gaaggctgga tccgaaattt aacgggattg ctattctgag gactcctgga
     1261 gagccgtgga caagacatga tgtacaaaca tacaggcaat attataatca attaagggaa
     1321 tccagaggct ttgctgttga cccaatttat agaatcagga taaacaacgg caatgaattt
     1381 aaccgtatca tgtcatcaaa atacccttat aatgagcttt atgtagccaa tcctaaatcg
     1441 gcgacggggt attttagggt agattcgtat aatcctgcga cagaggaaat tatttcaaga
     1501 aaatttaccc aattttctca aatccaagaa agtacgggga ttggttatat caaggaggct
     1561 gttagaaaat atagccctgg tgctgtcatt tccaatgttc caagtacacc tactacgata
     1621 agaggaaga
//
LOCUS       DAWITQ010000240         1577 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.240, whole genome shotgun sequence.
ACCESSION   DAWITQ010000240 DAWITQ010000000
VERSION     DAWITQ010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1577)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1577)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1577
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.240"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            373..603
                     /locus_tag="WIX18_002089"
     CDS             373..603
                     /locus_tag="WIX18_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239130.1"
                     /translation="MNIVKKYAVKALLAAGIFTPAIVMADGFDASAIGAQVANVIMGF
                     VAMVSAVGMAAITVILAIQGFKMAWSMIKSVK"
     gene            632..934
                     /locus_tag="WIX18_002090"
     CDS             632..934
                     /locus_tag="WIX18_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239131.1"
                     /translation="MGFRVGMNCFDTRLQADDYLLSSLPPTVTQDGKIIRPERVGEKW
                     VLNGKPVMLSYPKCSNFEQIKQGSYVGSTVLILFVVIYGFRLLINFLKDMGKVGTD"
     gene            1050..1364
                     /locus_tag="WIX18_002091"
     CDS             1050..1364
                     /locus_tag="WIX18_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1132 family protein"
                     /protein_id="HEZ5239132.1"
                     /translation="MNKPFITQAQLALYKYQPSSKYYGKTMAYTFASELLDYSKVNKF
                     IIHEEIQCFLNRRISNNIWKIYFSDESVAYIKILELQDDSSRGIEIKTFDFNPNVGDV
                     FG"
     gene            1342..>1577
                     /locus_tag="WIX18_002092"
     CDS             1342..>1577
                     /locus_tag="WIX18_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T cell/B cell stimulating protein TspB"
                     /protein_id="HEZ5239133.1"
                     /translation="MLGMFSVNSYAERSKYHIGNSNVRLDIDHTKSVVTDFRVDGQRF
                     SGRIIEPSIIEHVPTGARSLEKVPVKFTASVSRAG"
BASE COUNT          468 a          262 c          349 g          498 t
ORIGIN      
        1 ttcggtgatg tggggtttac tcaaaatatt aaatcagcag gtcaatttga aagctacgaa
       61 gatgcgttga attcaggcat aaatgaaata ggcggaggat tccagatatt tcagttcttc
      121 gtaaaatcgg aataaaagaa aaacaggctc ggcgggcggt ctgtcaacct ttcacaaagc
      181 ccgcaacaaa ggaaaaatat catgaaaatg aaccttgcaa cactaattat cggctgggtg
      241 gtttgtatgt ttctttttct tttcgcaatc ctctatttta tcggctaaaa acgagattcg
      301 gaaaagactt cgtccggatg aagcaagtca agaagtcgtc ttattttaaa tatcaaaaaa
      361 aggaaaaaaa cgatgaacat cgttaaaaaa tatgctgtaa aagcattgtt ggcagccggt
      421 atcttcacac cggctattgt tatggcagat ggctttgatg catccgcgat tggtgcgcaa
      481 gtggcgaatg taatcatggg ttttgtggca atggtttccg ccgtgggtat ggcggcaatc
      541 accgtaattc ttgcaatcca aggcttcaaa atggcttgga gcatgatcaa atctgtcaaa
      601 taacggcagt gaagaaagag ggggcgcgta aatgggcttt cgtgtcggta tgaattgttt
      661 tgatacaaga ttgcaggcag acgactattt attgtcgtcc cttcccccta ctgttaccca
      721 ggacggaaaa atcatcaggc cggaaagggt gggcgaaaaa tgggtcttga acggaaagcc
      781 ggtaatgttg tcctatccga aatgttccaa ttttgagcag atcaaacagg gttcttatgt
      841 cggttcgacg gttttaattc tgttcgtagt catttacggc ttcaggcttt tgattaattt
      901 tttaaaagac atgggcaagg ttggtactga ttgatgatta ttgatttttg gtttttgcta
      961 ggtttcttct tggctttgtc tgtcgctttg atatttaaat gacgtgtttt aaaatcaggc
     1021 ttttaaaaca acctttgaaa gacagaaaca tgaacaagcc gtttatcacg caggcgcagt
     1081 tggcacttta taaatatcag ccgtctagca agtattatgg taaaacaatg gcatatactt
     1141 tcgctagtga gcttttggat tattcaaaag ttaataaatt tataattcat gaagaaatcc
     1201 aatgtttttt aaatagaagg atttctaata atatttggaa aatttatttt tctgatgagt
     1261 ctgttgcgta tataaaaatt ttagaattac aggatgattc tagtcgtgga attgaaatta
     1321 aaacgtttga ttttaatcct aatgttgggg atgttttcgg ttaattctta tgccgaacgt
     1381 tctaagtatc acattggaaa ttcaaatgtt agattggata ttgatcatac aaaatctgta
     1441 gttaccgatt ttcgtgttga tggtcagcgt ttttcaggtc gaattatcga accttcaata
     1501 atagaacacg tgccaacagg tgcacgctct cttgaaaaag tccccgttaa atttaccgca
     1561 tcagtttccc gcgccgg
//
LOCUS       DAWITQ010000241         1543 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.241, whole genome shotgun sequence.
ACCESSION   DAWITQ010000241 DAWITQ010000000
VERSION     DAWITQ010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1543)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1543)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1543
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.241"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..636
                     /locus_tag="WIX18_002093"
     CDS             <1..636
                     /locus_tag="WIX18_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin"
                     /protein_id="HEZ5239134.1"
                     /translation="VYAAGWTAPLIGTAGKAAISTCMANPSGCTVMVTQAAEAGAGIA
                     TGAVTVGNAWEAPVGALSKAKAAKQAIPTQTVKELDGLLQESKNIGAVNTRINIANST
                     TRYTPMRQTGQPVSAGFEHVLEGHFHRPIANNRSVFTISPNELKVILQSNKVVSSPVS
                     MTPDGQYMRTVDVGKVIGTTSIKEGGQPTTTIKVFTDKSGNLITTYPVKGN"
     gene            643..1152
                     /locus_tag="WIX18_002094"
     CDS             643..1152
                     /locus_tag="WIX18_002094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239135.1"
                     /translation="MSNFEKKYILELNDALSHLNHNSTSFDLLKVLISWLSNDIVIDK
                     FKILGYDFSKYIEMNPDDYPVEKSILNREEIIYLKNNIYRKISSGNFKFQYFVQYIRD
                     ILEYLFIEHIERVCPYCEWGEMQKLEEQNTHETVYLCTQCGCAFYNDNSQFLLKTPLT
                     IPMKRDEFK"
     gene            1221..>1543
                     /locus_tag="WIX18_002095"
     CDS             1221..>1543
                     /locus_tag="WIX18_002095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HEZ5239136.1"
                     /translation="MIYGSMPSEKLTIFQTAFVMQVNIQIPCMLYRRGSVKPPLFEAP
                     RLLPSFTDPVVPKLSAPGGYIVDIPKGNLKTEIEKLAKQPEYAYLKQLQVAKNVNWNQ
                     VQLAY"
BASE COUNT          498 a          305 c          309 g          431 t
ORIGIN      
        1 gtttatgcag caggttggac agctccgctg atcggtacag ctggtaaagc agctatcagc
       61 acctgtatgg ctaatccttc tggttgtact gtcatggtta cgcaggctgc tgaagcgggc
      121 gcgggaatcg ccacgggtgc ggtaacggta ggcaacgctt gggaagctcc agtaggagcg
      181 ttgtcgaaag cgaaggcggc taagcaggct ataccaaccc agacagttaa agaacttgat
      241 ggcttactac aagaatcaaa aaatataggt gctgtaaata cacgaattaa tatagcgaat
      301 agtactactc gatatacacc aatgagacaa acgggacaac cggtatctgc tggctttgag
      361 catgttcttg aggggcactt ccataggcct attgcgaata accgttcagt ttttaccatc
      421 tccccaaatg aattgaaggt tatacttcaa agtaataaag tagtttcttc tcccgtatcg
      481 atgactcctg atggccaata tatgcggact gtcgatgtag gaaaagttat tggtactact
      541 tctattaaag aaggtggaca acccacaact acaattaaag tatttacaga taagtcagga
      601 aatttgatta ctacataccc agtaaaagga aactaactaa atatgagtaa ctttgaaaaa
      661 aaatatattt tagaattaaa tgatgcttta agccatttaa atcataactc tacctcattt
      721 gatttattga aagttttgat ttcatggtta tcaaacgata ttgtcattga taaatttaaa
      781 attttaggtt atgactttag taaatatatc gaaatgaatc ccgatgacta tccggttgaa
      841 aaatctatat tgaatagaga ggaaattatt tatctcaaaa acaatattta tcgtaaaata
      901 tcatcaggaa attttaaatt tcaatacttt gtacaatata ttagagatat tttagaatat
      961 ttatttattg aacatattga aagagtctgt ccttactgcg aatggggtga aatgcaaaaa
     1021 ttagaagaac aaaatacgca tgaaacggtg tatctctgta ctcaatgtgg atgtgctttt
     1081 tataacgata attcacaatt tttattaaaa acccctttaa ccattccaat gaaacgtgat
     1141 gaatttaaat aaacaagccg tagcctgcat gaaccctaaa atccacgtgt agcgtgtgtg
     1201 cgccagcacg catgcgttcc atgatttacg gctcaatgcc gtctgaaaag ctcacaattt
     1261 ttcagacggc atttgttatg caagtaaata ttcagattcc ctgtatgctg tacagacgcg
     1321 ggagtgttaa gccccccttg tttgaagctc cgcggctcct gccgagcttc accgaccccg
     1381 ttgtgcccaa gctctctgct cccggcggct acattgtcga catccccaaa ggcaatctga
     1441 aaaccgaaat cgaaaagctg gccaaacagc ccgagtatgc ctatctgaaa cagctccaag
     1501 tagcgaaaaa cgtcaactgg aaccaggtgc aactggctta cga
//
LOCUS       DAWITQ010000242         1516 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.242, whole genome shotgun sequence.
ACCESSION   DAWITQ010000242 DAWITQ010000000
VERSION     DAWITQ010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1516)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1516)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1516
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.242"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            184..396
                     /locus_tag="WIX18_002096"
     CDS             184..396
                     /locus_tag="WIX18_002096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239137.1"
                     /translation="MPHIHPLHLFPPHIAERGLLYFQQGKVGAVQKTSTGRYRAEVCG
                     LENYWVWLKLDSDLYIKDESCDCPYV"
     gene            693..848
                     /locus_tag="WIX18_002097"
     CDS             693..848
                     /locus_tag="WIX18_002097"
                     /inference="COORDINATES: protein motif:HMM:NF017953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase"
                     /protein_id="HEZ5239138.1"
                     /translation="MSERKTKPSPKKGVVFPFIKKLLSINEINPNDPTIGFILLSRNN
                     PDTDYES"
     gene            complement(938..1387)
                     /locus_tag="WIX18_002098"
     CDS             complement(938..1387)
                     /locus_tag="WIX18_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HEZ5239139.1"
                     /translation="MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRA
                     ALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEGFCIRLNGIARGALDSKFMLKAV
                     AIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK"
BASE COUNT          477 a          366 c          233 g          440 t
ORIGIN      
        1 ttttgcaaag gtctcagtct ttttaaacca cagcccttcc caactaaacc aaaaggtcgt
       61 ctgaacccta ttttcagacg accttttgcc actttgtaaa acaaatcttc ccaccatcct
      121 ctccccaaac atcgcccgaa ccagtaaact tctcatattt caacaacttc ttggaagcaa
      181 accatgcccc atatccaccc gctccacctg ttcccgcccc atatcgccga acgcggactg
      241 ctctattttc agcagggcaa agttggtgct gtccaaaaaa cttccaccgg gcgttatcgg
      301 gcggaggtat gcggtttgga aaactattgg gtatggctga agctggatag tgatttgtat
      361 attaaagacg aaagctgcga ttgcccttat gtctaaaggt gcaaacatac cttaaattac
      421 tatattacat aggcaaaata caagcctata acgaattgga aacaaaatgc cgtctgaaag
      481 cattataaaa tctgttcacc ttttcagatg agtaatgtac acccctatac aatttttgct
      541 actatacccc ataaatccac ggctaaagat atccttatta tgtcctatga tttatcgaaa
      601 cgacttgtaa tcggcttagc atcaagtgcc ctattcgact tatccgaatc ggataatata
      661 tttagaatgg aaggggcaga aacctatagg caatatcaga gagaaaaaca aaaccatccc
      721 ctaaaaaagg cgttgtcttt ccatttatta aaaaacttct gtcaatcaat gaaataaacc
      781 caaacgaccc aacaattggg tttattcttt tatccagaaa caatccagat acagattacg
      841 agtcataact ataggcttaa tattacacga ttctcattcc atcaaggcgg aaaaccgcac
      901 aaatactgaa acactatcga tcgatttgta aacaagccta cttaagtaac ttgcagtcct
      961 tatcatttcc tttaaaataa tccagcccgt cactacacga actggcggac ttcttgcaaa
     1021 taaaggttac tagattttca ttcatcttaa taataaaagg atttttatct ttatctatgg
     1081 ctaccgcctt caacatgaat ttactgtcta aggccccgcg cgcgattcca ttcaaacgga
     1141 tacaaaagcc ttctgcctct ttaatcggca aacttggcca tttggtagat gtttgtttaa
     1201 atctcccatt ctgcagataa aacttttcca taaaatgtgc attttctaac aaggctgccc
     1261 gcactgcatt tatctttgct ttctcaacat aattgcgata gctcggataa acaattaaag
     1321 caagtacaga caatatcaag accactgata ttaattcaac cagcgtaaac ccccgattat
     1381 cagtcattac tttacttcca ataagaacag attattcaac atatttcttt gaacagactt
     1441 actatcccat tcagcagtat gcatatttcc cactctattt tttatccgcg ggcagcaccg
     1501 gtttggctgg gccttt
//
LOCUS       DAWITQ010000243         1501 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.243, whole genome shotgun sequence.
ACCESSION   DAWITQ010000243 DAWITQ010000000
VERSION     DAWITQ010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1501)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1501)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1501
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.243"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            34..1428
                     /locus_tag="WIX18_002099"
     CDS             34..1428
                     /locus_tag="WIX18_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HEZ5239140.1"
                     /translation="MTPSALKKTVLLLGTAFAAASAQASGYHFGTQSVNAQSTANAAA
                     AEAADASTIFYNPAGLTKLDSSQISVNANIVFPSIRYEADSATDFTGIPVQGSKSGKI
                     TKTTVAPHIYGAYKVNDNLTVGLGVYVPFGSATEYEKDSVLRHNINKLGLTSIAVEPV
                     AAWKLNERHSFGAGIIAQHTSAELRKYADWGIPKKAQMLQATPSNPTAAAQIKADGHA
                     DVKGSDWGFGYQLAWMWDINDRARVGVNYRSKVSHTLKGDAEWAADDAMAKQLWNSNM
                     LAPLGYTANEKARVKIVTPESLSVHGMYKVSDKADLFGDVTWTRHSRFDKAELVFEKE
                     KTIVNGKSDRTTITPNWRNTYKVGFGGSYQISEPLQLRAGIAFDKSPVRNADYRMNSL
                     PDGNRIWFSAGMKYHIGKNHVVDAAYTHIHINDTSYRTAKASGNDVDSKGASSARFKN
                     HADIIGLQYTYKFK"
BASE COUNT          398 a          495 c          342 g          266 t
ORIGIN      
        1 ttatccaccg tccgcctttt tacggaaacc gaaatgaccc cttccgcact gaaaaaaacc
       61 gtcctgctgc tcggcactgc ctttgccgcc gcatccgcac aagcctccgg ctaccacttc
      121 ggcacacagt cggtcaacgc gcaaagcacg gcgaatgccg ccgccgcaga agccgccgac
      181 gcatcgacca tcttctacaa ccccgccggc ctgaccaaac tcgacagcag ccagatttcc
      241 gtcaacgcca atatcgtatt tccaagcatc cgttatgaag cggattccgc caccgacttt
      301 accggcattc ccgtccaagg ttcgaaaagc ggcaaaatca ccaaaaccac ggttgcgccc
      361 cacatctacg gcgcatacaa agtcaacgac aatctgaccg taggcttggg cgtgtacgtc
      421 cccttcggct ctgccaccga atacgaaaaa gattccgtat tgcgccacaa catcaacaaa
      481 ctcggtctga ccagcatcgc cgtcgaaccc gtcgccgcgt ggaaactcaa cgaacgccat
      541 tccttcggcg caggcatcat cgcccaacat acttctgccg agctgcgcaa atatgccgac
      601 tgggggatcc caaaaaaagc gcaaatgctg caagcaacac cttctaatcc tactgccgct
      661 gctcaaatca aagccgacgg acacgccgat gtcaaaggca gcgattgggg cttcggctac
      721 caactggcgt ggatgtggga catcaacgac cgcgcacgcg tgggcgtgaa ctaccgttcc
      781 aaagtctcac acacgctcaa aggcgatgcc gaatgggcgg cagacgacgc aatggcgaaa
      841 caactgtgga atagcaatat gctcgcaccg ctcggctaca cggcgaatga aaaagcccgc
      901 gttaaaatcg ttacgcctga gtctttgtcc gtacacggta tgtacaaagt gtccgataaa
      961 gccgacctgt tcggcgacgt aacttggacg cgccacagcc gcttcgataa ggcggaactg
     1021 gtttttgaaa aagaaaaaac catcgtcaac ggcaaatccg accgcaccac catcaccccc
     1081 aactggcgca acacctacaa agtcggcttc ggcggttctt atcaaatcag cgaaccgctg
     1141 caactgcgcg ccggcatcgc ttttgacaaa tcgcccgtcc gcaacgccga ctaccgcatg
     1201 aacagcctgc ccgacggcaa ccgcatctgg ttctccgccg gcatgaaata ccatatcggc
     1261 aaaaaccacg tcgtcgatgc cgcctacacc cacatccaca tcaacgacac cagctaccgc
     1321 acggcgaagg caagcggcaa cgatgtggac agcaaaggcg cgtcttccgc acgtttcaaa
     1381 aaccacgccg acatcatcgg cctgcaatac acctacaaat tcaaataaac ggcccgccgt
     1441 ttgattgtag aaatgccgtc tgaaacagat ttccgtttca gacggcattg ttttaggctc
     1501 g
//
LOCUS       DAWITQ010000244         1498 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.244, whole genome shotgun sequence.
ACCESSION   DAWITQ010000244 DAWITQ010000000
VERSION     DAWITQ010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1498)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1498)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1498
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.244"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..372
                     /locus_tag="WIX18_002100"
     CDS             <1..372
                     /locus_tag="WIX18_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HEZ5239141.1"
                     /translation="RLRRLVLIFVNPLYIIATTVPAQQTFLDAAELMQWSRETEWLGL
                     NVIAHRNFGKQHAQVEFEAYFRDGQHRSAHHELSGFVNIGGQWYFIDPTVPHPAMKQP
                     CICGSGKKFKACCGKYLKPVA"
     gene            complement(663..1457)
                     /locus_tag="WIX18_002101"
     CDS             complement(663..1457)
                     /locus_tag="WIX18_002101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEZ5239142.1"
                     /translation="MLHRLQKVVRHIAQTEIMPRFLNTPSHRKEDGSMLSEADIAAQT
                     AFAAALPLLIDSPMLGEEMSRQEQSALWEQYSGEKGLWIVDPIDGTNNFVNGLPHFAV
                     SVAFVRNGRAELGVIYNPVSGECFYAERGQGAFLNGTRLPLRLVDKKLNEAIAGVEIK
                     YLRSGKLSSRMSTLAPFGTIRSMGSSTLDWCYLACGRYDVYVHGGQKLWDYAAGALIF
                     EEAGGRLTTLEGDGFWSGEHVFKRSVVAALEPKLFERWVGWIRENQ"
BASE COUNT          393 a          459 c          322 g          324 t
ORIGIN      
        1 cggcttcgtc gccttgtcct gatttttgtt aatccactat acatcatcgc tactaccgtt
       61 ccggcacaac aaacattcct cgatgccgcc gaactgatgc agtggagcag agaaaccgaa
      121 tggctgggct tgaatgtcat cgcacaccgc aacttcggca aacagcacgc ccaagtcgaa
      181 tttgaagcct acttccgaga cggacaacac cgatctgcgc atcacgaact gtccggcttc
      241 gtcaacatcg gcggacaatg gtattttatc gatcccaccg ttccgcatcc tgcgatgaaa
      301 caaccctgca tttgcggatc gggcaaaaaa ttcaaagcct gctgcggcaa atatctgaaa
      361 cctgtcgcat aaaaatgccg tctgaacgtt cagacggcat ttttaacgcg caaaaaaaac
      421 cattcatacc aagggtaagt atgaatggtc aatacattgc gggaaaacgt cttacttgct
      481 gcactgccga aaagggagaa acggcagcgg taatcagcgg aaaggattgt acccgtataa
      541 atgttaagta acgttaatta tgaaaatata accgatgttt cggcacacaa tccgcaactg
      601 tccggcgcag gcggcggcaa agcctgttta ttcaaaccct tattcctgcc catctgtcca
      661 ccttactggt tttcccgtat ccacccgacc cagcgttcaa acagcttcgg ttcgagcgcg
      721 gcaacgaccg agcgtttgaa cacgtgttca ccactccaaa acccgtcgcc ttccaaagtc
      781 gtcagcctgc cgcccgcctc ctcgaaaatc aacgcacccg cagcatagtc ccacagcttc
      841 tgcccaccgt gaacataaac atcataacgc ccgcacgcca gataacacca atccaacgta
      901 ctgctgccca tactccgtat cgttccaaaa ggcgcgagcg tactcatacg gctggaaagt
      961 ttgcccgaac gcaaatattt gatttccacg cccgcaatcg cctcattgag ttttttatcc
     1021 acgagacgca aaggcaggcg ggttccatta agaaacgcac cctgcccccg ttcggcataa
     1081 aaacattcgc cgctgaccgg attgtaaatc acacccaatt cggcgcgccc gttgcggaca
     1141 aacgccaccg acacggcaaa atgcggcagc ccgttgacaa aattgttcgt cccgtctatc
     1201 ggatcgacaa tccacagccc cttttccccc gaatattgtt cccacaaagc cgactgttcc
     1261 tgccgcgaca tttcctcgcc caacatcgga ctgtcgatta aaagcggcaa cgcggcggca
     1321 aaagccgtct gcgcggcaat gtccgcctcg ctcaacatcg aaccgtcttc cttgcggtga
     1381 gacggcgtat tcaaaaaacg cggcataatt tcggtttgcg cgatatggcg cacgactttc
     1441 tgcaaacggt gtaacacttc ctactgtcct catattttga acttgcggca cgcgaacg
//
LOCUS       DAWITQ010000245         1468 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.245, whole genome shotgun sequence.
ACCESSION   DAWITQ010000245 DAWITQ010000000
VERSION     DAWITQ010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1468)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1468)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1468
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.245"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(65..1273)
                     /locus_tag="WIX18_002102"
     CDS             complement(65..1273)
                     /locus_tag="WIX18_002102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HEZ5239143.1"
                     /translation="MSEAEYFSHFISNGNGKLLEIPQRRGRQDGVFIDWLSFTLHEDS
                     LLKVSGCPLVSDAEYMFVLSKKLEEILGFGITSRCKSKGNKFYDSMFRLGSEEVDYGE
                     VHYGGQRNTVLIELKGVGCNIANPGWELRLKQFLEDSLRPRITRVDLALDFFDGEYTP
                     EQALLDHDNGFFDNSNMRPKSEMVGTAWRREDGSGKTFYVGRKKNSRFVRVYEKGRQL
                     GDKESKWVRFEIQFNHGDMEIPLDILINQGSYFSGAFPICQKFKNMPNPERFDYRKKV
                     ANLTFQHKLRYAKNAVGKLINFMFDMGFDSDEIVRYLKADLGYPKGLEPEKYSLAGLK
                     ESLKFGFIHEQPDVDLEVELEELGIIKFKQSDKFDPDKRLFDPHHDVESERQYQLYLD
                     RMYDLHANQN"
BASE COUNT          414 a          361 c          239 g          454 t
ORIGIN      
        1 aaaaaagttg cgggataagt tacagtttga gtttgattaa acatattaat ttttcctttt
       61 taggttaatt ttgatttgca tgaagatcat acattctgtc gagataaagc tgatattgcc
      121 tctcactttc tacatcgtga tgtggatcga aaagcctttt atccggatcg aatttatctg
      181 attgcttaaa tttgataatt ccgagttctt ccaattcaac ctctaaatct acatccggtt
      241 gttcgtggat aaagccgaat ttcaaagatt ccttcaatcc ggccaacgaa tatttttcag
      301 gttctagccc tttgggatac cccaaatctg ccttcagata tctgacaatt tcatcactat
      361 caaaacccat atcaaacatg aaattaatca gtttgccgac cgcgtttttt gcgtatctca
      421 atttatgctg aaaagttaaa ttagccactt ttttacggta atcgaacctt tccggattcg
      481 gcatattttt aaatttctga caaatcggga aagcgcctga aaagtaagaa ccttgattta
      541 tcagaatatc caaaggtatt tccatatctc catgattaaa ctgaatttcg aaccttaccc
      601 acttgctttc tttatcgcct agctgcctgc ctttctcata aacacgcaca aaacgagaat
      661 ttttcttgcg acctacataa aatgtcttgc cgctcccgtc ctctctccgc caagccgttc
      721 caaccatttc agatttcggc ctcatgttac tgttatcgaa aaaaccgtta tcgtgatcca
      781 aaagtgcctg ttccggcgtg tactccccat caaaaaaatc aagtgccaaa tctacccgcg
      841 ttatcctcgg cctcaatgaa tcttccaaaa actgcttaag cctcaattcc caacctggat
      901 ttgcaatgtt gcaacctaca cctttcaatt cgattaaaac cgtatttcgc tgacctccgt
      961 aatggacttc gccgtagtca acttcttccg atcccaacct aaacatcgaa tcataaaatt
     1021 tattgccctt cgatttgcat ctgctcgtga tgccaaaccc taatatttcc tccaattttt
     1081 tgcttaaaac aaacatatat tcggcatcgg aaactaaggg gcatccggaa actttcagca
     1141 aggaatcttc gtgcagtgtg aatgacaacc aatctataaa aacgccgtcc tgcctgcccc
     1201 tacgttgcgg aatttctaat aacttcccat tgccgttaga tatgaaatgg gaaaaatatt
     1261 ctgcttcact cattttgttc agtaccttta gggatttgtt ttatttcgct ccccccctgt
     1321 tagtcagggg ggggctttca gccgtttccc gtctgccgcg ctaaagcgcg tccaacggtc
     1381 aacgaccgaa agcccaatcc tgacaaactg ttaaagatca agaagaaaga ccacaaccgt
     1441 ctgttgtgat aattaccgga aaattcga
//
LOCUS       DAWITQ010000246         1465 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.246, whole genome shotgun sequence.
ACCESSION   DAWITQ010000246 DAWITQ010000000
VERSION     DAWITQ010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1465)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1465)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1465
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.246"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(56..1270)
                     /locus_tag="WIX18_002103"
     CDS             complement(56..1270)
                     /locus_tag="WIX18_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HEZ5239144.1"
                     /translation="MSEVEYFSHFISDGKGKLLEIPQRRGKQDGVFVDWISFTFHEDT
                     LLKVSGCPLFSDAEYMYVLSRKLEEILGFGITRKCKSRGNKFYESMYRLGSDDVDYGE
                     VHFGGQRNTVLVELKGTGCSVASPGWELRLKQFLDDSIRTRITRIDLALDFFDGEYTP
                     DQALLDHDNGFFDNSNQRPKSETIGTAWRNEDGSGKTFYVGRKKNSRFVRVYEKGRQL
                     GDKESKWVRFEIQFNYGDIEIPLDILINQGSYFCGAFPICRKFKNMPVPERFDQRKKT
                     LNLTFEHKLHYAKNAVGKLVNFMIEMGFDNSEIVESLKADSGFPKGLEPEKYALEMLR
                     DGLKHGFIHEQPDIDLEIELDELGVIAFKNSDKFDREKRLFSPDYDVEKERKYQEYLS
                     KVYHQNVDYDYF"
BASE COUNT          441 a          358 c          208 g          458 t
ORIGIN      
        1 aaaaaagttg caggataagt tacagtttga gtttgattaa acattttgat ttcctttaaa
       61 aataatcata atctacattt tgatgataaa ctttacttaa atattcctga tatttccttt
      121 ctttctcgac atcataatca ggactaaaaa gccttttttc cctatcgaat ttgtcagaat
      181 ttttaaaagc aataaccccc aattcatcaa gttcaatttc caaatcaata tccggctgtt
      241 catgaataaa accgtgtttc aaaccgtccc ttaacatttc cagagcatat ttttcaggtt
      301 ctaatccttt gggaaatccc gaatctgcct ttaaagattc cacaatttcg ctattatcaa
      361 aacccatttc aatcatgaaa ttgaccagtt ttccaaccgc gtttttcgcg taatgcaatt
      421 tatgctcgaa agttaaatta agcgttttct ttctctgatc aaacctttcg ggaaccggca
      481 tatttttaaa ttttctacaa attggaaaag ctccacagaa atacgaaccc tgatttatta
      541 aaatatccaa gggtatttct atatctccat aattaaactg gatctcgaac cttacccatt
      601 tgctttcttt atctccaagc tgcctgcctt tctcataaac acgaacaaaa cgagaatttt
      661 tcttgcgacc tacataaaat gtcttgccgc tcccgtcctc attccgccaa gccgtaccga
      721 tcgtttcaga tttcggcctt tgattgctgt tatcaaaaaa accattatcg tgatctaaca
      781 acgcctgatc cggcgtgtac tctccatcaa aaaaatcaag tgctaggtca attcgcgtta
      841 ttcttgtcct tatcgaatca tcgagaaact gctttagcct caactcccaa cccggacttg
      901 caacgctgca accagtacct ttcaactcaa ctaaaacagt attgcgctga cctccgaaat
      961 gcacctctcc ataatcaaca tcatccgaac ctaacctata catggattca tagaatttgt
     1021 tgccccttga tttgcatttg cgcgttatgc caaaacctag aatttcttcc agctttctgc
     1081 ttaatacata catgtattca gcatcagaaa ataaagggca accggaaact ttcagtaaag
     1141 tatcttcatg gaatgtgaat gaaatccaat caacaaaaac cccgtcttgc ttacctcttc
     1201 gctgcggaat ttctaaaagc ttcccttttc cgtccgatat aaagtgtgag aaatattcaa
     1261 cttcactcat tcgttcacta ctcttggaat tggtttttaa tttcgctccc cccctgttag
     1321 tcaagggggg gctttcagcc gtttcccgtc ttccgcgcta aagcgcgtac gacggtcaac
     1381 gaccgaaagc caaatcctga caaactttta aagatcaaca aaaaagacca caaccatccg
     1441 ttgtgataat cactggaaaa ttcga
//
LOCUS       DAWITQ010000247         1456 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.247, whole genome shotgun sequence.
ACCESSION   DAWITQ010000247 DAWITQ010000000
VERSION     DAWITQ010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1456)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1456)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1456
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.247"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            180..509
                     /locus_tag="WIX18_002104"
     CDS             180..509
                     /locus_tag="WIX18_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ5239145.1"
                     /translation="MGSLIIEDLQEGFGKEAVKGKEITVHYTGWLEKGTKFDSSLDRR
                     QPLTITLGVGQVIKGWDEGFGGMKEGGKRKLTIPSEMGYGAHGAGGVIPPHATLIFEV
                     ELLKVYE"
     gene            538..903
                     /locus_tag="WIX18_002105"
     CDS             538..903
                     /locus_tag="WIX18_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HEZ5239146.1"
                     /translation="MASSNVNKEIKDKKLSLWAKRQDGSVKWFCGQPVTRTTAGAKDD
                     TVAADTDTAKKIDTKHLPSTCRDDSSTGCIETPRADFKHFQKISRYRVLPESRHMAEK
                     LRHSRAGGNLGLSARKLIG"
     gene            950..>1456
                     /locus_tag="WIX18_002106"
     CDS             950..>1456
                     /locus_tag="WIX18_002106"
                     /inference="COORDINATES: protein motif:HMM:NF012342.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HEZ5239147.1"
                     /translation="MTGFNDAAGVASVSTDIKGKYVQSVTVANGVITAQMASSGVNNE
                     IKGKKLSLWAKRQDGSVKWFCGQPVTRAAKAKDDVTADTTTNTKIDTKHLPSTCRDAA
                     SAVCTKTPEYYPNHGEWPSDNSAAGVASSSTIKGKYVEKVEVKNGVITAEMKSSGVNK
                     EIQGKKLSL"
BASE COUNT          438 a          406 c          350 g          262 t
ORIGIN      
        1 aaatttaatc cactatattt ccatgaaaaa gcatggaacc tttacgaaaa aaataaaaca
       61 gtcaaacaaa cacagccgtt tcagctgcac cggagcagct gacgtttgag cggcatttga
      121 cttcgccgga cggtatgtta cccttgccgt tttaaccaac aagcaacgaa aggacaaata
      181 tgggcagcct gattattgaa gatttgcagg aaggcttcgg aaaagaagca gttaaaggca
      241 aagagattac cgtgcattac acaggttggc tggaaaaagg aaccaaattc gactccagcc
      301 tcgaccgccg ccagccgctg accatcacgc tcggtgtcgg acaagtcatc aaaggctggg
      361 acgaaggctt cggcggaatg aaggaaggcg gcaaacgcaa gctgaccatc ccttcggaaa
      421 tgggctacgg cgcacacggc gcgggcggcg tgattccccc gcacgccact ttgatatttg
      481 aagtcgagct gctgaaagtg tacgaataaa gctgcccggg caataccgtc tgacataatg
      541 gcttcaagca acgtaaacaa agaaatcaaa gacaaaaaac tctccctgtg ggccaagcgt
      601 caagacggtt cggtaaaatg gttctgcgga cagccggtta cgcgcaccac cgccggcgcc
      661 aaagacgaca ccgtcgccgc cgacaccgac accgccaaga agatcgacac caagcacctg
      721 ccgtcaacct gccgcgatga ttcatctacc ggttgcatag aaacaccacg cgccgacttc
      781 aaacacttcc aaaaaatcag ccgttaccga gtattgcccg aatcacggca catggccgaa
      841 aaacttcgtc attcccgcgc aggcgggaat ctaggtctgt cggcacggaa acttatcggg
      901 taaaacggtt tcttgagatt ttgcgttcta gattcccact ttcgtgggaa tgacgggatt
      961 taatgatgcc gccggcgtgg catccgtctc caccgacatc aaaggcaaat atgttcaaag
     1021 cgttacagtc gcaaacggcg tcattaccgc ccaaatggct tcaagcggcg taaacaacga
     1081 aatcaaaggc aaaaaactct ccctgtgggc caagcgtcaa gacggttcgg taaaatggtt
     1141 ctgcggacag ccggttacgc gcgccgccaa agccaaagac gacgttaccg ccgacaccac
     1201 caccaacacc aagatcgaca ccaagcacct gccgtcaacc tgccgcgacg cagcatctgc
     1261 cgtttgcaca aaaacacccg agtattaccc gaatcacggc gaatggccgt ccgacaatag
     1321 tgccgccggc gtggcatctt cttcaacaat caaaggcaaa tatgttgaga aagttgaagt
     1381 caaaaacggc gtcattaccg ccgaaatgaa atcaagcggc gtaaacaaag aaatccaagg
     1441 caaaaaactc tccctg
//
LOCUS       DAWITQ010000248         1441 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.248, whole genome shotgun sequence.
ACCESSION   DAWITQ010000248 DAWITQ010000000
VERSION     DAWITQ010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1441)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1441)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1441
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.248"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(80..1417)
                     /locus_tag="WIX18_002107"
     CDS             complement(80..1417)
                     /locus_tag="WIX18_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEZ5239148.1"
                     /translation="MSNHTSWSSKIGFVLAAAGSAIGLGAIWKFPYTAGTNGGAVFFL
                     LFLIFTILVALPVQLAEFYIGRTGGKNAVDSFRALRPGTQWLWVGRMGVAACFILLSF
                     YSVVGGWVLNYVVHSFTGAIHAGADFEALFGTTISNPAGSLSYQALFMLITVWVVKGG
                     ISDGIEKANRYLMPGLFILFIALAIRSLTLPGAMEGVSFLLKPNWSYFKADTMITALG
                     QAFFALSIGVSAMITYASYLGKDQDMFRSGHTIMWMNLLVSLLAGLVIFPAVFAFGFE
                     PSQGPGLIFIVLPAVFMKMPFGTVLFAVFMLLVVFATLTSAFSMLETVIASTIRQDER
                     KRKKHTWLIGTAIFIVGIPSALSFGVWGEFKVFGKTIFDLWDYVISAVIMPIGALSVS
                     IFTAWIQDKQSVLKDAGSGSTVPRAVLLLWLNTLRYLAPIAIIIVFINSLGIL"
BASE COUNT          449 a          380 c          350 g          262 t
ORIGIN      
        1 tgaacgaaat aggctgaacc tgaagcaaaa atgccgtctg aaaggctttc agacggcatt
       61 tttgccgttt ggagggcttt taaaggatgc ccaaagaatt gatgaaaaca ataataatgg
      121 caatcggggc aaggtagcgc aaggtattca gccacagcag cagcactgcc cgtggtacgg
      181 tgctgccaga tccggcatct tttaacacag actgcttgtc ctgaatccag gcggtaaaga
      241 tggaaacact caaagcacca atcggcataa tgacggcgga aataacatag tcccacaaat
      301 caaaaatggt tttgccgaaa accttaaact caccccatac gccgaaagac agcgcggacg
      361 ggatgccgac aatgaaaata gccgtgccga taagccaagt gtgctttttg cgtttgcgct
      421 cgtcttggcg gatggttgag gcaatgaccg tttccaacat cgaaaatgcg gaagtcagcg
      481 tggcgaaaac gaccagaagc atgaataccg caaacaaaac cgtaccgaac ggcatcttca
      541 taaacactgc gggcaatacg ataaaaatca atcccggccc ctggctcggt tcaaaaccga
      601 aggcgaacac cgccggaaaa atcaccaggc cggcaagcag cgaaaccaag aggttcatcc
      661 acataatcgt atggccggaa cggaacatat cctgatcttt tcccaaatat gaagcgtagg
      721 taatcatggc ggaaacgccg atgctcaggg caaaaaacgc ctgtcccaaa gccgtaatca
      781 tcgtatcggc tttaaagtac gaccaattcg gtttgagcag gaaagacacg ccctccattg
      841 cacccggcag cgtcagcgaa cggattgcca gcgcaataaa gaggataaac agccccggca
      901 tcagataacg gtttgccttt tcaatgccgt ctgaaatccc gcctttgacc acccaaaccg
      961 taatcagcat aaacagtgcc tgataggaca gcgaacctgc cggattggaa atcgttgtgc
     1021 cgaacagggc ttcaaagtcc gctcctgcat ggattgcccc tgtaaaactg tggacgacat
     1081 aattcaatac ccatccgccg accacgctgt aaaacgacag caaaataaag caggcggcaa
     1141 cgcccatgcg cccgacccaa agccattgcg tgcccggacg cagagccctg aaggaatcga
     1201 cggcattttt accgcccgtg cgcccgatat aaaactcggc aagctggacg ggcagggcga
     1261 ccaagatagt aaatatcaaa aacagcagga aaaacaccgc gccgccgttg gtgcctgccg
     1321 tataagggaa tttccaaatc gcgcccaaac cgatggccga acctgccgca gcaaggacga
     1381 aaccgatttt ggacgaccaa gaagtatggt tactcataaa atttattaag aaatgtgaaa
     1441 g
//
LOCUS       DAWITQ010000249         1379 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.249, whole genome shotgun sequence.
ACCESSION   DAWITQ010000249 DAWITQ010000000
VERSION     DAWITQ010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1379)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1379)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1379
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.249"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            34..1287
                     /gene="murA"
                     /locus_tag="WIX18_002108"
     CDS             34..1287
                     /gene="murA"
                     /locus_tag="WIX18_002108"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEZ5239149.1"
                     /translation="MDKLKISANGPLNGEITVSGAKNAALPLMCAGLLTSGTLRLKNV
                     PMLADVKTTQKLLQGMGARVLTDNISEFEINGGTVNNTCAPYELVRTMRASILVLGPT
                     LARFGEAQVSLPGGCAIGSRPVDQHLKGLEAMGAEIVIEHGYVKAKGKLKGTRVAMDV
                     VTVGGTENLLMAATLAEGTTVLENCAIEPEVVDLAECLVKMGAKISGIGTSTMIVEGV
                     DELHGCEHSVVPDRIEAGTFLCAVAITGGRVVLRNAAPKTMEVVLDKLVEAGAVIEAG
                     DDWIAIDMRQRPKAVDIRTVVHPGFPTDMQAQFMALNAVAEGSCRVVETIFENRFMHV
                     PELNRMGANITTEGNTAFVQGVERLSGAVVKATDLRASASLVIAGLAARGETVVEQIY
                     HLDRGYENIEKKLGSVGANIERVSG"
BASE COUNT          311 a          343 c          457 g          268 t
ORIGIN      
        1 cactatacaa gtaccctcta ggaaagaaca aacgtggata aactgaaaat ctccgcaaac
       61 ggcccgctca acggggaaat aacggtctcg ggcgcgaaaa acgcggcatt gccgctgatg
      121 tgcgcgggtt tgctgacatc gggtacgttg cgcctgaaaa atgtgcctat gctggcagat
      181 gtgaaaacca cgcaaaagct gcttcagggg atgggcgcgc gcgtcctgac cgacaatatc
      241 agcgaatttg aaatcaacgg cggtacggta aacaatacgt gcgcccctta cgagttggtc
      301 cggacgatgc gcgcttcgat tttggtgctg ggcccgacgc tggcgcgttt cggcgaggcg
      361 caagtcagcc tgccgggcgg ctgcgccatc ggttcgcgcc ccgtcgatca gcatttgaaa
      421 ggcttggaag cgatgggtgc tgagattgtt atcgaacacg gttacgtcaa ggccaaaggc
      481 aaactcaaag gtacgcgcgt ggcgatggat gtcgttaccg tcggcggcac ggaaaacctg
      541 ctgatggcgg cgacgctggc ggaaggtacg acggttttgg aaaactgcgc catcgagcct
      601 gaagtggtcg atttggcgga atgcctggtc aaaatgggcg cgaaaatcag cggcatcggt
      661 acgtccacga tgattgtgga aggtgtggac gagctgcacg gctgcgaaca cagcgtcgtc
      721 cccgaccgga ttgaagcggg gacgttcctg tgcgcggtgg cgataaccgg cggcagggtg
      781 gttttgcgga atgccgcccc gaaaacgatg gaagtggtgt tggacaaact ggttgaggca
      841 ggtgcggtga ttgaagcggg cgacgattgg atcgccatcg atatgcggca gcgtccgaag
      901 gcggtggaca tccgcacggt cgtccacccc ggcttcccca cggatatgca ggcgcagttt
      961 atggcattga atgccgtggc agagggaagc tgccgcgtgg tggaaacgat ttttgaaaac
     1021 cgctttatgc acgtccccga gttgaaccgg atgggggcga acattacaac cgagggcaat
     1081 acggcatttg tgcagggtgt ggaacggctt tccggcgcgg tcgtcaaggc gacggatttg
     1141 cgcgcgtccg caagcctcgt tatcgccggt ttggcggcgc gaggcgaaac cgtggtcgaa
     1201 cagatttacc acttggatcg cggttatgaa aatattgaaa aaaaactcgg cagcgtcggc
     1261 gcgaacatcg agcgcgtatc cggctgatcg ggttgcgatg ccgtctgaag ccttcagacg
     1321 gcggcggatt cgcatttgaa gtgcaacttt ccctaacaga aaaaggccag tatgcggta
//
LOCUS       DAWITQ010000250         1344 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.250, whole genome shotgun sequence.
ACCESSION   DAWITQ010000250 DAWITQ010000000
VERSION     DAWITQ010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1344)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1344)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1344
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.250"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..155)
                     /locus_tag="WIX18_002109"
     CDS             complement(<1..155)
                     /locus_tag="WIX18_002109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239150.1"
                     /translation="MQLLAAEGIHQHQLNVQKSTRFIGIKVGKSNYSKNELNETKLPV
                     RVIAQTA"
     gene            complement(262..525)
                     /locus_tag="WIX18_002110"
     CDS             complement(262..525)
                     /locus_tag="WIX18_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239151.1"
                     /translation="MDKEIKICPRCEQGYLYHAKPKYFSGEVILCDECYAMWLGDMKI
                     FYGQYGKDFYDYHEFMKDKGIEEINMWEGELFDHPYYEDEKFK"
     gene            complement(544..1326)
                     /locus_tag="WIX18_002111"
     CDS             complement(544..1326)
                     /locus_tag="WIX18_002111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
                     /protein_id="HEZ5239152.1"
                     /translation="MGEIVGEALVKNTDFSGMTASEIEKAKANITAYAKLVAGATVGV
                     TGGNVDVAANASETAVKNNALDIIWDIGNLVWDGGKWIYAKSIGDKQMAREAAIDFGV
                     DAAAAAVPFVPAGATKISRGGAYVLKAGDEAVDTAKAIQEIQKQTGIKLTYDKVNKVW
                     TTPAGLDYGLDAKHGNRIKHVLAHTIPNPNKPVHSVFNVSRKEVLPLVDEAWRMKGNP
                     LPNDSSVYLVDMKKPIGTKGETKVRIVVQKGTNKIISAYPQK"
BASE COUNT          362 a          325 c          224 g          433 t
ORIGIN      
        1 ttggctgttt gggcgataac gcgtacgggc agtttggttt cgttcagctc gtttttgctg
       61 taattgcttt tacccacttt gatgccgatg aaacgggtac ttttctgaac attcaattgg
      121 tgttggtgaa tgccttcggc tgccagcagt tgcattgagg ccgtctgaaa aacggatatt
      181 cagacggcct attgctactt taaataatat ttgggtttaa aatatcatcg tatttcccaa
      241 attcggggaa cagaaaatca attatttaaa tttttcatcc tcataatatg ggtgatcaaa
      301 aagctctcct tcccacatat ttatttcttc tatgccttta tctttcataa actcatgata
      361 atcataaaaa tcttttccat attgtccgta aaaaattttc atatccccaa gccacatagc
      421 ataacattca tcgcataaaa tgacctcccc agagaaatat ttaggctttg catgataaag
      481 gtagccttgc tcacatcttg ggcaaatttt aatttcttta tccataagag attcctttct
      541 taattatttc tgaggatatg cagaaatgat tttatttgtt cctttttgca caacaatccg
      601 cacttttgtt tctccttttg ttccaatagg tttcttcata tctacaagat atacggatga
      661 atcatttggc aaaggatttc ctttcattct ccaagcttca tcaaccaaag gcaaaacttc
      721 tttacgggac acattaaaaa cagaatgaac aggtttgttt ggatttggaa ttgtatgggc
      781 taaaacatgt ttaatcctat taccatgctt agcatctaac ccataatcta accccgccgg
      841 tgttgtccaa accttattaa ccttatcata agtaagcttg attccggtct gcttctgaat
      901 ttcctgtatg gctttagccg tatcaactgc ttcgtctccc gccttcagaa cataagcccc
      961 gcctcggctg attttagtcg cacctgccgg aacaaaggga acggcagctg cggcggcatc
     1021 cacaccaaaa tcaatcgccg cttctcgagc catctgctta tcgccaatag atttggcgta
     1081 aatccattta ccgccgtccc atacgaggtt gccgatatcc caaataatat ctaatgcatt
     1141 atttttaaca gctgtttcgg aagcatttgc cgccacatca acattgcctc ctgtaacacc
     1201 tacagtcgct ccggctacca attttgcata cgcagtaata ttcgctttag ctttttcaat
     1261 ttcagaagca gtcataccgc tgaaatcggt attcttaacc aaagcctccc cgacaatctc
     1321 ccccacgacc gcaccaatcg cgcc
//
LOCUS       DAWITQ010000251         1309 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.251, whole genome shotgun sequence.
ACCESSION   DAWITQ010000251 DAWITQ010000000
VERSION     DAWITQ010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1309)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1309)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1309
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.251"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(60..731)
                     /locus_tag="WIX18_002112"
     CDS             complement(60..731)
                     /locus_tag="WIX18_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEZ5239153.1"
                     /translation="MFPDKYKLSLKENIFLAKKVLVAQIHNLSRFENCQTTLLQTEQI
                     IHGKNVASASLEDIQTILNLKRAYQYVISHISNGEPVDISLLKKINNTVAKDDSLAPG
                     DFRTGSVGVTLLDGSRHAPNPVKEIEVARVLQNIGLQSGSTTEAAVRFMLYCMRQQVF
                     WDGNKRTATLFANGLMMERGRGILEISEMQMPQFNEKLSAFYRSGDDTDISKFVYQNC
                     ISGID"
BASE COUNT          325 a          290 c          301 g          393 t
ORIGIN      
        1 aaaatcccct aaatgtcttg gtgggaattt aaggggtttt ggggaatttt gcaaaggtct
       61 cagtctatgc ccgatataca attttgatac acaaacttgg aaatatcggt atcgtcgccg
      121 gagcgataga atgcggacag tttttcattg aattgcggca tctgcatttc ggagatttcc
      181 aagatgccac ggcctctctc catcatcaga ccattggcaa ataaggttgc cgttcgtttg
      241 ttgccgtccc aaaaaacctg ctgccgcata caataaagca taaaacggac ggctgcctcc
      301 gtcgtcgaac cgctttgcag tccgatattt tgtaacacgc gggccacttc aatttccttc
      361 actggattcg gggcatgacg ggaaccgtcc aatagcgtta cgccgaccga accggtacgg
      421 aaatcaccgg gtgccaaaga atcgtccttg gcaacagtgt tgttgatttt tttaaggagt
      481 gaaatatcga ccggttcgcc gtttgaaata tgcgaaatca catattgata ggcacgtttc
      541 aggttcaaga tggtttggat gtcttccagt gacgcggagg ctacattttt gccatggata
      601 atttgttcgg tctgcaacaa ggtcgtctga caattctcaa aacggctgag gttgtgaatt
      661 tgggcaacca atactttctt tgccaaaaaa atattttctt tcaaactcaa cttgtatttg
      721 tcgggaaaca cgataattcc ttaaataatt aaagcagtac gttaaatcat catcttatca
      781 tcactttcgg ggtttatgtt gcgtgcgtcc gttttctaat acggtttccc atcccgcgaa
      841 acgaggcgga ggcctgtgca aaaaacctgt tcacgaaatt ttccgcatta acgatacgct
      901 gaaaatgcgc taaaaatgac tgtgtttgaa tatcggttga tttcatccgt ttgtgtaacc
      961 tcgcgccggt tttgtcatga ttttgcatta tagtgaatta aatttaaacc agtacagcgt
     1021 tgcctcgcct taccgtacta tctgtactgt ctgcggcttc gtcgccttgt cctgattttt
     1081 gttaattcac tatatttttg tcatgcggat atttcacggg atgacaaaac gggcgcaaaa
     1141 aagcccgatt ggaaaatccg aatcgggctt ttttgtgatg ttctgttcga tttgcgtact
     1201 aactgccggc cggagcgtcc gcgcccggtt tggcaggtcg gattctcgaa tccgacggct
     1261 atttgagatg gcaggctttt gtcggataca agtatccgac ctacggctt
//
LOCUS       DAWITQ010000252         1222 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.252, whole genome shotgun sequence.
ACCESSION   DAWITQ010000252 DAWITQ010000000
VERSION     DAWITQ010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1222)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1222)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1222
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.252"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(46..492)
                     /locus_tag="WIX18_002113"
     CDS             complement(46..492)
                     /locus_tag="WIX18_002113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239154.1"
                     /translation="MLTKLKILLFLFLFVFVLAINLLFFFFSSDIESFGNYQFEYVYD
                     KGWPANYILVMKDGNEGNFDKIISGLVLEYYKEDDNIYFSYIDGQGFASDSCYYKPEI
                     LYGKIILNKNHIININSMEKNNFLSEDKIMKGTRNWLADPKNKCNI"
BASE COUNT          435 a          224 c          129 g          434 t
ORIGIN      
        1 cgatcgattc cgttgtattt tcgcaagacg cgtttagtct agagtctata tattacattt
       61 atttttaggg tctgctagcc aatttcttgt tcccttcatt attttatctt ctgaaagaaa
      121 attatttttt tccatgctat taatattaat gatatgattt ttatttaaaa taatttttcc
      181 atataaaatt tccggtttgt aatagcaaga gtctgaagca aatccttgcc cgtcaatata
      241 agaaaaataa atgttatcat cctccttata atattctaaa accaatccgg atattatttt
      301 atcaaaattc ccttcatttc catctttcat gactaaaata taattagcag gccaaccttt
      361 atcgtaaaca tattcaaact gatagttccc gaaactctcg atatccgaac taaaaaagaa
      421 gaaaagcaaa ttaatagcca atacaaaaac aaataagaac aaaaatagca aaattttcaa
      481 cttagttaac aatatttacc tctcctttaa attcaatcct gaaaggtacc ccttaccctg
      541 ggctaccaat tatagtttcc atatttctaa atattgtttt tacattactt ttttctcccc
      601 ccaaaggaat gcattttaaa atcatgcttt tcaggtgcta atcgatactt accattaaca
      661 tctttaatca cagatatatt tccatgtata gcccaacgtg aaaaatctga gtattatata
      721 cagttatacc ttactgaaac aaagctagct gtacatatct gtaccatatt tttactacaa
      781 acaaaaaata tttataatta ttaaggataa gataaaaacc cccaacgcca gattaattct
      841 taataatttc aaataaaaaa tatttgagat tttttctttt ccaaataata tattgaaata
      901 tttaaagtta aggtagcttg atttaattag aaaatcaaaa aaaaccatta attaattttt
      961 cttctttaaa tattttatat gatattataa aattaaataa cattgcgaaa acatatgaaa
     1021 tcatcaaaat accaaatata tagtgggaat gcattattat ttagctcctt cttttggctc
     1081 tgacaaattg acagtccatt gatatccaat gcttgcattt gcaattgctg acgcacctgc
     1141 ccctgttttc cctgttagta tcaatggttc ttttcttgca agatgtgcac ctgcacaacc
     1201 acctaatact aaaccaccac ct
//
LOCUS       DAWITQ010000253         1213 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.253, whole genome shotgun sequence.
ACCESSION   DAWITQ010000253 DAWITQ010000000
VERSION     DAWITQ010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1213)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1213)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1213
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.253"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(175..333)
                     /locus_tag="WIX18_002114"
                     /pseudo
     CDS             complement(175..333)
                     /locus_tag="WIX18_002114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249760.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            489..>1213
                     /locus_tag="WIX18_002115"
     CDS             489..>1213
                     /locus_tag="WIX18_002115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HEZ5239155.1"
                     /translation="MNKTLYRVIFNRKRGAVVAVAETTKREGKSCADSDSGSAHVKSV
                     PFGTTHAPVCRSNIFSFSLLGFSLCLAVGTANIAFADGIIADKAAPKTQQATILQTGN
                     GIPQVNIQTPTSAGVSVNQYTQFDVGNRGAILNNSRSNTQTQLGGWIQGNLWLARGEA
                     RVVVNQINSSHSSQMNGYIEVGGRRAEVVIANPAGIAVNGGGFINASRATLTTGQPQY
                     QAGALTGFQVRSGHIAITGQGLDA"
BASE COUNT          363 a          251 c          262 g          337 t
ORIGIN      
        1 cgtccaaaat gctctttggg aatgctattg gattatagac cttacaacag aaaaaaaggt
       61 cggaaagtag aaagactgct ttttaaattc aaacggccaa gcaagtaaag acttggccaa
      121 caaatgggac aaaatccgac tgttttaaat tgccagtcaa atactggaaa acttgcgtaa
      181 atggctaaat tcactgacat caagtacatc ataactacga aaggtatccg tatacacaat
      241 gccatcagac ttaactttct ctcggataat cggcaataat gttgctgatt gcgcattagg
      301 gacaacgacg gtataaacct tgccatttcg ttcgaatggg atttttaacc gttatctagt
      361 aaagtcccta atttaataaa caaatggcag taaaatggcg gtaattgact cgccaaaatc
      421 cttgatctag aatggtcaga ctatccaatt ttttctaata actctataaa aatcaaataa
      481 ctgaaatcat gaataaaact ctctatcgtg taattttcaa ccgcaaacgt ggggctgtgg
      541 tagccgttgc tgaaactacc aagcgcgaag gtaaaagctg tgccgatagt gattcaggca
      601 gcgctcatgt gaaatctgtt ccttttggta ctactcatgc acctgtttgt cgttcaaata
      661 tcttttcttt ttctttattg ggcttttctt tatgtttggc tgtaggtacg gccaatattg
      721 cttttgctga tggcattatt gctgataaag ctgctcctaa aacccaacaa gccacgattc
      781 tgcaaacagg taacggcata ccgcaagtca atattcaaac ccctacttcg gcaggggttt
      841 ctgttaatca atatacacag tttgatgtgg gtaatcgcgg ggcgatttta aacaacagcc
      901 gcagcaacac ccaaacacag ctaggcggtt ggattcaagg caatctttgg ttggcaaggg
      961 gcgaagcacg tgtggttgta aaccaaatca acagcagcca ttcttcacaa atgaatggct
     1021 atattgaagt gggcggacga cgtgcagaag tcgttattgc caatccggca gggattgcag
     1081 tcaatggtgg tggttttatc aatgcttccc gtgctacttt gacgacaggc caaccgcaat
     1141 atcaagcagg cgcattaaca ggctttcagg ttcgttcggg tcatattgcg atcacgggac
     1201 aaggtttgga tgc
//
LOCUS       DAWITQ010000254         1036 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.254, whole genome shotgun sequence.
ACCESSION   DAWITQ010000254 DAWITQ010000000
VERSION     DAWITQ010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1036)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.254"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(303..689)
                     /locus_tag="WIX18_002116"
     CDS             complement(303..689)
                     /locus_tag="WIX18_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEZ5239156.1"
                     /translation="MRKILLDTHALLWWLLDDKKLGTSARKLIENPRNAIFVSAASIW
                     EISIKQNKGLLKLPEEFFDVLQEEDFEMLPIGLFHAKQAGSLPEIHKDPFDRMLIAQT
                     QAEGFELMTVDEYIPQYGIRVVNASS"
     gene            complement(686..931)
                     /locus_tag="WIX18_002117"
     CDS             complement(686..931)
                     /locus_tag="WIX18_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HEZ5239157.1"
                     /translation="MFQANIHQAKTNLSQLIQRAEAGEIVIIAKAGKPCVQLTGIEKP
                     ARNAGRLKKFSHMGNTDISRILEDDNETAALFEESAL"
BASE COUNT          282 a          244 c          184 g          326 t
ORIGIN      
        1 aacacagcca tatatattaa gtacctgctc tttatgcgct tttttaggaa aggaagatca
       61 aacggttcaa tagcgaagtc ttgcccaaat ttgatggaca ggatatagaa tacatgcgtg
      121 cataccacac cctgccaaag ttgggagatg cacttaaggt tgcacttgtg gtcgccaact
      181 atgcctatac acgcggattt cccgcgttta taggccgcga cggaagtctg gcttttaagc
      241 gaagacaata accgaaaaga ccgcctcggc ggtctttctt gtgtacacag tttttatatt
      301 tgtcagcttg atgcattgac aactctaatt ccatattgcg gaatatattc atcgacagtc
      361 atcagttcaa agccttccgc ttgggtttgt gcaatcaaca tcctatcgaa agggtctttg
      421 tgtatttccg gaaggcttcc agcctgtttt gcatgaaaca gacctatagg cagcatttca
      481 aaatcctctt cttgaagcac atcaaaaaac tcttccggta atttcaacaa ccccttgttc
      541 tgcttgatgg aaatttccca aatacttgct gcactgacaa agatcgcatt tctcggattt
      601 tctatcagtt tgcgtgcaga tgtccccagt ttcttgtcat ccaacaacca ccacagcaaa
      661 gcatgggtat caagcagaat ctttctcaca gagccgactc ctcaaataaa gctgccgttt
      721 cattgtcatc ctcaagaata cgtgaaatat ccgtatttcc catatgactg aattttttca
      781 accttcctgc atttcgtgcc ggtttttcaa taccggttag ttggacgcaa ggcttacctg
      841 ctttcgcaat aataacgatt tcccctgctt ctgctctttg aatcaattga ctcaaattgg
      901 tttttgcctg atgaatattt gcttgaaaca taacacttct catgattagc taacttaact
      961 aatatacatc attaccaaga ttttgggaat ctcattacat atatttgatt atatccgccg
     1021 ttttattcac accttg
//
LOCUS       DAWITQ010000255         1022 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.255, whole genome shotgun sequence.
ACCESSION   DAWITQ010000255 DAWITQ010000000
VERSION     DAWITQ010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1022)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.255"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..>1022
                     /locus_tag="WIX18_002118"
     CDS             <1..>1022
                     /locus_tag="WIX18_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HEZ5239158.1"
                     /translation="TGAGAAIVVIIVTALTYGYGAAAAGSVTAAGSSTAAAATTTAAA
                     TTTVSTAAAMQTAALASLYSQAAVAIINNKGDVGKALKDLGTSDTVKQIVTSALTAGA
                     LNQMGADIAQLNSKVRTELFSSTGNQTIANLGGRLATNLSNAGISAGINTAVNGGSLK
                     DNLGNAALGALVNSFQGEAASKIKTTFSDDYVAKQFAHALAGCVSGLVQGKCKDGAIG
                     AAVGEIVAESILGGRNPATLSDAEKHKVISYSKIIAGSVAALNGGDVNTAANAAEVAV
                     VNNALNFDSTPTNAKKHQPQKPDKTALEKIIQSIMPAHAAGAMTNPQDKDAAIWISNI
                     RNGITGP"
BASE COUNT          298 a          247 c          271 g          206 t
ORIGIN      
        1 accggagccg gtgcagcgat tgtggtgatt attgtaaccg ctctaactta tggatacgga
       61 gcggctgcag cgggtagcgt aactgccgca ggaagtagta cagccgcagc tgcaacaacg
      121 acagcggcag caactaccac tgtttctact gcagctgcca tgcaaaccgc agctttagcc
      181 tccttgtata gccaagcagc tgtagccatc atcaataata aaggcgatgt aggcaaagca
      241 ttaaaagatc tcggcaccag tgatacggtc aagcagattg ttacttccgc actgacggcg
      301 ggtgcattaa accagatggg agcagatatt gcccaattga acagcaaggt aagaaccgaa
      361 ctgttcagca gtacgggcaa tcaaaccatt gccaaccttg gaggcagatt ggccaccaac
      421 ctcagcaatg caggtatctc agctggtatc aataccgccg ttaacggcgg cagcttgaaa
      481 gacaacttag gcaatgccgc attgggagca ttggttaata gcttccaagg ggaagccgcc
      541 agcaaaatca aaacaacctt cagcgacgat tatgttgcca aacagttcgc ccacgctttg
      601 gcgggttgtg ttagcggact ggtacaggga aaatgtaaag atggggcaat tggcgcagca
      661 gttggggaaa tcgtagctga atccatactt ggcggcagaa accctgctac actcagcgat
      721 gcagaaaagc ataaagttat cagttactcg aagattattg cgggcagcgt ggcggcactc
      781 aacggcggcg atgtgaatac tgcggcgaat gcggctgagg tagctgtggt gaataatgct
      841 ttgaattttg acagcacccc taccaatgcg aaaaagcatc aaccgcagaa gcccgacaaa
      901 accgcactgg aaaaaatcat ccaaagtatt atgcctgcac atgcggcagg tgcgatgact
      961 aatccgcagg ataaggatgc tgccatttgg ataagcaata tccgtaatgg catcacaggc
     1021 cc
//
LOCUS       DAWITQ010000256          989 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.256, whole genome shotgun sequence.
ACCESSION   DAWITQ010000256 DAWITQ010000000
VERSION     DAWITQ010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 989)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 989)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..989
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.256"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..486
                     /gene="mafA"
                     /locus_tag="WIX18_002119"
     CDS             <1..486
                     /gene="mafA"
                     /locus_tag="WIX18_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HEZ5239159.1"
                     /translation="YRNETLLANPRDVSFLTNLIQTVFYLRGIEVVPPEYADTDVFVT
                     VDVFGTVRSRTELHLYNAETLKAQTKLEYFAVDRDSRKLLIAPKTAAYESQYQEQYAL
                     WMGPYSVGKTVKASDRLMVDFSDITPYGDTTAQNRPDFKQNNGKNPDVGNEVIRRRKG
                     G"
     gene            490..>989
                     /gene="mafB"
                     /locus_tag="WIX18_002120"
     CDS             490..>989
                     /gene="mafB"
                     /locus_tag="WIX18_002120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HEZ5239160.1"
                     /translation="MKPLRRLTNLLAACAVAAAAFGQPALAADLAQDPFITDNAQRQH
                     YEPGGKYHLFGDPRGSVSDRTGQINVIQDYTHQMGNLLIQQANINGTIGYHTRFSGHG
                     HEEHAPFDNHAADSASEEKGSVNEGFTVYRLNWKGHEHHPADGYDGPQGGNYPKPTGA
                     RDEYTY"
BASE COUNT          267 a          369 c          213 g          140 t
ORIGIN      
        1 taccgcaacg aaaccctgct cgccaacccc cgcgacgttt ccttcctgac caacctcatc
       61 caaaccgtct tctacctgcg cggcatcgaa gtcgtaccgc ccgaatacgc cgacaccgac
      121 gtattcgtaa ccgtcgacgt attcggcacc gtccgcagcc gcaccgaact gcacctctac
      181 aacgccgaaa cccttaaagc ccaaaccaag ctcgaatatt tcgccgttga ccgcgacagc
      241 cggaaactgc tgattgcccc taaaaccgcc gcctacgaat cccaatacca agaacaatac
      301 gccctctgga tgggacctta cagcgtcggc aaaaccgtca aagcctcaga ccgcctgatg
      361 gtcgatttct ccgacatcac cccctacggt gacacaaccg cccaaaaccg tcccgacttc
      421 aaacaaaaca acggtaaaaa ccccgatgtc ggcaacgaag tcatccgccg ccgcaaagga
      481 ggataaaccg tgaaaccgct gcgcagactg acaaacctcc ttgccgcctg cgccgtagcg
      541 gccgccgcct tcggacagcc cgccctcgcg gcggacttgg cgcaagaccc gttcattacc
      601 gataacgccc aacggcagca ctacgaaccc ggaggcaaat accacctctt cggcgacccg
      661 cgcggcagcg tttccgaccg caccggtcaa atcaacgtca tccaagacta tacccaccag
      721 atgggcaacc tgctcatcca acaggcaaac atcaacggca caatcggcta ccacacccgc
      781 ttttccggac acggacacga agaacacgcc cccttcgaca accacgccgc cgacagcgca
      841 agcgaagaaa aaggcagcgt caacgaaggc tttaccgtat accgcctcaa ctggaaaggg
      901 cacgaacatc atcccgccga cggctatgac ggcccgcagg gcggcaatta ccccaaacct
      961 acgggcgcac gagacgaata cacctatca
//
LOCUS       DAWITQ010000257          988 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.257, whole genome shotgun sequence.
ACCESSION   DAWITQ010000257 DAWITQ010000000
VERSION     DAWITQ010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 988)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 988)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.257"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(17..955)
                     /locus_tag="WIX18_002121"
     CDS             complement(17..955)
                     /locus_tag="WIX18_002121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239161.1"
                     /translation="MDAYTEAEAPPQSIVELVPVLIAVTDGGLRVLTVAQGTLLPNGP
                     LSPLRNSLQAGVKLWVAKQTSQPMGYVEQLYTFVDTHRRNEHGMPVLYVSYLGLVREA
                     ADSILHPDAKWQDCYGYFPWEDLRTDGGQRDAVVSRLRIWANSADTEEVRQMRLKRIH
                     LCWGVEPENWSEEYVLQRYEMLYESGLIVEAAEPQANFDFALTGQPMRHDHRRVLATA
                     LSRLRAKIKYRPVIFELMPPEFTLLQLQNSVEAISGRLLHKQNFRRQIQQQNLIEPSD
                     TGVSGSKGRPAQLCRFRDDVLPDRLISDIGLPLGSR"
BASE COUNT          182 a          280 c          315 g          211 t
ORIGIN      
        1 gtcgtctgaa aacgggctaa cggctgccca gcggcaatcc gatgtccgaa atcagcctgt
       61 cgggcaggac gtcgtcgcgg aagcggcaaa gctgcgcggg acggcctttg ctgcccgata
      121 cgccggtatc cgacggctcg ataaggtttt gctgctgaat ctggcggcgg aagttttgct
      181 tgtgcagcaa tcttccgctg atggcttcga cactgttttg cagttgcagc agcgtgaatt
      241 cgggcggcat cagttcaaaa atcacggggc ggtatttgat tttggcgcgc aggcgggaca
      301 gggcggtcgc cagtacgcga cggtgatcgt ggcgcatggg ctgccccgtg agcgcgaagt
      361 cgaagtttgc ctgcggctcg gcggcttcca ctatcagacc gctttcatac agcatttcat
      421 agcgttgtaa aacgtattct tccgaccagt tttccggttc gaccccccag cacaaatgaa
      481 tgcgcttgag ccgcatttga cgcacttcct ccgtgtccgc cgaatttgcc caaatgcgca
      541 ggcggctgac gacggcgtcg cgctgcccgc cgtcggtgcg caagtcttcc cacgggaaat
      601 agccgtagca gtcctgccat ttcgcatccg ggtgcaggat gctgtcggct gcctcgcgca
      661 ccagccccaa atagctgacg tacaagacgg gcatgccgtg ttcgttgcgg cggtgggtat
      721 cgacaaaggt gtaaagctgt tccacatagc ccataggctg cgaagtctgc ttggcaaccc
      781 acagcttcac gcccgcctgc agggaattgc gcagagggga gagcgggccg ttgggcagga
      841 gtgtgccttg ggcgacggtt aatacccgca ggccgccgtc ggtaacggca atcaatacgg
      901 gaaccagctc gacgatgctt tgcggcgggg cttcggcttc ggtgtaggca tccatgctcg
      961 gctttctgcg ggtgggaaag gctttatt
//
LOCUS       DAWITQ010000258          973 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.258, whole genome shotgun sequence.
ACCESSION   DAWITQ010000258 DAWITQ010000000
VERSION     DAWITQ010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 973)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 973)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..973
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.258"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(100..495)
                     /locus_tag="WIX18_002122"
     CDS             complement(100..495)
                     /locus_tag="WIX18_002122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239162.1"
                     /translation="MMYSFEANANAVKISETVSVDTGQGAKIHKFVPKNSKTYSSDLI
                     KTVDLTHIPTGAKARINAKITASISRAGVLAGGGKLARLGAKFSTRAVPYVGTALLAH
                     DVYETFKEDIQARGYQYDTETDKFAKVSG"
     gene            complement(479..796)
                     /locus_tag="WIX18_002123"
     CDS             complement(479..796)
                     /locus_tag="WIX18_002123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1132 family protein"
                     /protein_id="HEZ5239163.1"
                     /translation="MNKPFITQAQLALYKYQPSSKYFGQSMAVIAQSEFVEFAKINKS
                     ENVIDCFSFFWNRRIKHDIWLISFSDNSEMVIKESLKDGHKIYKFEFCEIVDNCNFDD
                     VFV"
BASE COUNT          277 a          215 c          182 g          299 t
ORIGIN      
        1 ccataacacc tcctaatttt acctaaatac ccccttaatc ctccccggat acccgataat
       61 caggcatccg ggttactttt taggcggcaa caggcgcact tagcctgaga cctttgcaaa
      121 tttgtcggtt tcggtgtcgt attggtagcc tcgtgcctgt atgtcttctt tgaaagtttc
      181 gtatacgtcg tgggctaaaa gggctgttcc gacataggga accgcccttg tgctgaattt
      241 cgcgcctaag cgggcaagtt tgccgccccc cgccaatacg ccggcgcggg aaatgctggc
      301 ggttattttg gcgttgattc gggcttttgc gcccgtaggg atgtgtgtta aatctaccgt
      361 ttttattaaa tcagatgaat aagttttact atttttaggt acaaacttat gaattttcgc
      421 accttgtccg gtatcaactg aaacagtttc agatattttt actgcatttg cattcgcttc
      481 aaacgaatac atcatcaaaa ttgcaattat cgacaatttc gcaaaattca aatttgtata
      541 ttttatgacc atctttcagg gattctttaa ttaccatttc tgaattatca gaaaatgaga
      601 ttagccaaat atcatgttta attcttctat tccagaaaaa agagaaacaa tcaataacat
      661 tttcagactt attaatcttc gcaaattcaa caaattcaga ttgcgctata accgccatcg
      721 attgcccaaa atacttgctt gacggctgat atttataaag tgccaactgc gcctgagtga
      781 taaacggctt gttcatggtt ctgcctttca atgattgttt tgaaagcctg attttgacac
      841 cataacttca tgcgctcaat tcttaaacag aaccgccccg attaatacgg gtacggaaac
      901 gccgagataa aaataaaaat ccatcatttc aaaacctttt tcagcaggga aacaaagtaa
      961 acggacgcga gga
//
LOCUS       DAWITQ010000259          951 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.259, whole genome shotgun sequence.
ACCESSION   DAWITQ010000259 DAWITQ010000000
VERSION     DAWITQ010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 951)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 951)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.259"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            57..782
                     /locus_tag="WIX18_002124"
     CDS             57..782
                     /locus_tag="WIX18_002124"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HEZ5239164.1"
                     /translation="MPRFYLPENLSVGQTVALPDNIVRHLNVLRVRPNENITLFDGKG
                     KAHAAQLTVLEKRRAEAEILHEDTTDNESPLNITLIQSISSGDRMDFTLQKSVELGVT
                     AIQPVISERCIVRLDGERAAKRLARWQEIVISACEQSGRNTVPPVLPIIGYREALDKM
                     PSESTKLIMSINRARKLGDIRQPSGAIVFMVGPEGGWTEQEEQQAFDAGFQAVTLGKR
                     ILRTETAPLAALAAMQTLWGDFA"
BASE COUNT          251 a          328 c          212 g          160 t
ORIGIN      
        1 gtccgtttcc atcacgccgc tgcgacagat tataaccgtc cgaaccgcca aaaactatgc
       61 cccgattcta cctgcccgaa aacctttccg tcggacaaac cgtcgccctg cccgacaaca
      121 tcgtccgcca cctcaacgtc ctacgcgtcc gccccaacga aaacatcacc ctcttcgacg
      181 gcaaaggcaa ggcacacgcc gcacagctga ccgttttgga aaaacgccgc gccgaagccg
      241 aaatcctgca cgaagacaca accgacaacg agtccccgct caacatcaca ctgatacaat
      301 ccatctcctc cggcgatcgc atggatttca ccctgcaaaa aagcgtcgaa ctcggcgtaa
      361 ccgccataca gcccgtcatc agcgaacgct gcatcgtccg cctcgacgga gaacgcgccg
      421 ccaaacgcct cgcacgctgg caggaaatcg tcatctccgc gtgcgaacaa agcggcagga
      481 acaccgttcc ccccgtactg cccatcatcg gctaccgtga agcactcgac aaaatgccgt
      541 ctgaaagcac caagctgatt atgagcatca accgcgcccg caaactcggc gacatccgcc
      601 aaccgtccgg cgcaatcgtc tttatggtcg ggcctgaagg cggctggaca gaacaggaag
      661 aacaacaggc atttgatgcc ggctttcagg cggttacact cggcaaacgg attttacgca
      721 cagaaaccgc cccactcgcc gccctcgccg ccatgcagac gctttggggc gatttcgcat
      781 aaacagaaat gccgtctgaa acccgttcag acggcatttt gcagccgatt aagatagtag
      841 gttcaaataa gatttcccgt gtcgtcattc ccgcgaaagc gggaatctag aaacgaaaaa
      901 ctacagggat ttatccgaaa caacaaccct ctccgccgtc attcccgcgc a
//
LOCUS       DAWITQ010000260          923 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.260, whole genome shotgun sequence.
ACCESSION   DAWITQ010000260 DAWITQ010000000
VERSION     DAWITQ010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 923)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 923)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..923
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.260"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(85..717)
                     /gene="mtrR"
                     /locus_tag="WIX18_002125"
     CDS             complement(85..717)
                     /gene="mtrR"
                     /locus_tag="WIX18_002125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     repressor MtrR"
                     /protein_id="HEZ5239165.1"
                     /translation="MRKTKTEALKTKEHLMLAALETFYRKGIARTSLNEIAQAAGVTR
                     GALYWHFKNKEDLFDALFQRICDDIENCIAQDAEDAEGGSWAVFRHTLLHFFERLQSN
                     DIYYKFHNILFLKCEHTEQNAAVIAIARKHQAIWREKITAVLTEAVENQDLADDLDKE
                     TAVIFIKSTLDGLIWRWFSSCERFDLGKTAPRIIGIMMDNLENHPDLRRK"
BASE COUNT          210 a          204 c          240 g          269 t
ORIGIN      
        1 tatttttaga agaaggcttt gtgtcatttt gatgccgtct gaaagggttt gttcgtttca
       61 gacggcattg ctaccaaggc ttgattattt ccggcgcagg tcgggatggt tttccaagtt
      121 gtccatcatt atcccgatga tgcgcggggc ggttttgccc aaatcgaaac gttcgcagga
      181 agagaaccac cgccaaatca gcccgtccaa ggttgatttg atgaagataa ctgccgtttc
      241 cttgtccaaa tcgtcagcca aatcctgatt ttccaccgct tcggtcaaaa cggcggtaat
      301 tttctcgcgc cagattgcct gatgcttgcg ggcaatggcg ataacggcgg cgttttgctc
      361 cgtgtgttcg cattttaaaa acaggatgtt gtggaatttg tagtagatgt cgttgctttg
      421 cagccgctcg aaaaagtgca gcagcgtgtg gcggaatacc gcccaagacc ctccttcggc
      481 atcttcggca tcttgcgcga tgcagttttc gatgtcgtcg cagatacgtt ggaacagcgc
      541 gtcgaacaag tcttccttat ttttgaaatg ccaatagagc gcgccgcgcg ttacgccggc
      601 ggcttgggcg atttcgttga gcgaggtgcg cgcaatccct ttgcggtaaa aggtttccaa
      661 ggcggcaagc atcaggtgtt ctttggtttt caaggcttcg gttttggttt ttctcataat
      721 ggcgttttcg tttcgggtcg gtttgatgag ggcggattat aaaaaagact ttgtaaccat
      781 gcaatcgtgt atgtataatg aaacccatga aattgagact acatctcaac tttgaaaaca
      841 ggcataacct gctttgcaac ccgttcgaac attcgggtat caaagcaggc ggtttttata
      901 tcctgaaata tagtggatta aca
//
LOCUS       DAWITQ010000261          917 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.261, whole genome shotgun sequence.
ACCESSION   DAWITQ010000261 DAWITQ010000000
VERSION     DAWITQ010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 917)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 917)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..917
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.261"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(66..845)
                     /locus_tag="WIX18_002126"
     CDS             complement(66..845)
                     /locus_tag="WIX18_002126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadR family transcriptional regulator"
                     /protein_id="HEZ5239166.1"
                     /translation="MKLVRPQKISDQVLSVLEERIAEGVYAEGGKIPPERVLAEEFGV
                     SRPSVRSALNVLVARQVLEARQGDGYYVSVKPQQDFLQSWQELLGKHSNWEQDVFDFS
                     CHIEGCMAALAAERRTDADLKRIGFWLEKFEEACESGNLEHQSEADVSFHQTIADAAH
                     NLLFSHLSGGLLKMLYRQTRSSLIYLNQEEDPRPKLMAQHRVLYEAISNRRPGEASEA
                     AKAHLNYVASSIMKDREYQSRNRHADTLAQNDLKRVQDWEV"
BASE COUNT          224 a          292 c          182 g          219 t
ORIGIN      
        1 gtactggttt aaatttagtt cactataccg atacatccga atatgccaga ccgtctaaac
       61 ggtattcata cctcccaatc ctgcacgcgc ttcaaatcgt tttgcgccaa agtatccgcg
      121 tggcggttac ggctctgata ttccctgtct ttcatgatgc tgcttgccac ataattcaaa
      181 tgtgcctttg ccgcctccga agcctcgccc ggccgacggt tcgatatcgc ctcatacagc
      241 acgcggtgct gcgccatcag tttcggacgc ggatcttctt cctgattcag ataaataagg
      301 ctgctgcgcg tctgccggta cagcattttc aacaaaccgc ccgacaaatg gctgaacaac
      361 aaattgtgcg ccgcatccgc aatcgtctga tggaagctga catcggcttc gctctgatgt
      421 tccagattgc cgctttcgca cgcctcctca aacttttcaa gccaaaaccc aatccgcttc
      481 aaatcggcat ccgtccggcg ttctgccgcc aatgccgcca tacagccctc gatgtggcag
      541 ctgaaatcaa aaacatcctg ttcccaattg gaatgcttgc ccaaaagctc ctgccaactt
      601 tgcaaaaaat cctgctgcgg cttgaccgaa acataataac cgtctccctg cctcgcttcc
      661 aaaacctgac gggcaaccaa aacattcaat gccgaccgga ccgacgggcg cgaaacgccg
      721 aactcttccg ccaaaacgcg ttcgggcgga atcttgcccc cttccgcgta aaccccttcc
      781 gcaatgcgct cctccaatac cgacaatacc tgatcgctga ttttctgagg ccttaccagt
      841 ttcatcactc ctcctttata aagattccct gcagaaccct tccgaaatat agtggattaa
      901 caaaaatcag gacaagg
//
LOCUS       DAWITQ010000262          906 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.262, whole genome shotgun sequence.
ACCESSION   DAWITQ010000262 DAWITQ010000000
VERSION     DAWITQ010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 906)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 906)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.262"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..216
                     /locus_tag="WIX18_002127"
     CDS             <1..216
                     /locus_tag="WIX18_002127"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239167.1"
                     /translation="ADAGDVYCVYNIRLKQYTACQVTRVEEHGGKKTRATLLALDWQG
                     NKPLGAAELADLKPLYKDLKNNIGNIV"
     gene            547..>906
                     /locus_tag="WIX18_002128"
     CDS             547..>906
                     /locus_tag="WIX18_002128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239168.1"
                     /translation="MYWERGLHMYKASAVVPTGYVRVGNTAPLVGEDTQRYASFWGDG
                     YDVYRQLRWQQIPEKQRKAFKKAAKSKKTVMFAGREYGISKQNLSDVWDDFEDAMELK
                     AFPCLSSLFLTKWHKNLY"
BASE COUNT          280 a          149 c          213 g          264 t
ORIGIN      
        1 gctgatgccg gagacgtata ttgcgtctat aacatcagac tgaagcagta cactgcctgc
       61 caggttaccc gagttgaaga acacggtggc aaaaaaacac gtgcgaccct gctggctttg
      121 gactggcagg gcaacaaacc gcttggggcg gcggaactgg cggatttgaa accgctttac
      181 aaagacttaa agaataatat tggaaatatt gtatgaacaa aaaattaaac tatattttta
      241 tgttggactg tttagggttg gtgatattgt ttacttgtat aatagctact tttgaaagag
      301 attatggatt taaaattttt actaattcta agaggcctga attttattat tggattggaa
      361 tgttttatta tggaattatt tcttgctggt ttgattatca attaatttca acaaaggcga
      421 attcgtataa aagaaaagtt aaacaatata aaattttttc agtaatattt tcagttttga
      481 tatttatttc tactatagta aaactttaaa ttttggagca aaaatttatg agcgattcaa
      541 ttgaatatgt attgggaacg cggtctgcac atgtataagg caagtgccgt cgtgccgacg
      601 ggatatgtac gggttgggaa taccgcgccg ctggtcggcg aagacacgca acggtatgcc
      661 tctttttggg gcgacggcta cgacgtgtac cgtcagttga gatggcagca gatacccgaa
      721 aaacagagaa aggcattcaa aaaagccgcc aaaagcaaaa agaccgtgat gtttgccgga
      781 cgggaatacg gcatatccaa acagaatttg agcgatgttt gggatgattt tgaagacgcg
      841 atggaactga aggcgtttcc ctgcctgtct tcgctgtttc tgaccaaatg gcataaaaat
      901 ctatat
//
LOCUS       DAWITQ010000263          888 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.263, whole genome shotgun sequence.
ACCESSION   DAWITQ010000263 DAWITQ010000000
VERSION     DAWITQ010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 888)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 888)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.263"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..228
                     /locus_tag="WIX18_002129"
     CDS             <1..228
                     /locus_tag="WIX18_002129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEZ5239169.1"
                     /translation="HTPFFANYRPQFYFRTTDVTGAVTLEEGVEMVMPGENVTITVEL
                     IAPIAMEEGLRFAIREGGRTVGAGVVSSVIA"
     gene            246..557
                     /gene="rpsJ"
                     /locus_tag="WIX18_002130"
     CDS             246..557
                     /gene="rpsJ"
                     /locus_tag="WIX18_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HEZ5239170.1"
                     /translation="MANQKIRIRLKAYDYALIDRSAQEIVETAKRTGAVVKGPIPLPT
                     KIERFNILRSPHVNKTSREQLEIRTHLRLMDIVDWTDKTTDALMKLDLPAGVDVEIKV
                     Q"
     gene            678..>888
                     /locus_tag="WIX18_002131"
     CDS             678..>888
                     /locus_tag="WIX18_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HEZ5239171.1"
                     /translation="MSTFFQQTAQAMIARHIDRFPLLKLDQVIDWQPIEQYLNRQKTR
                     YLRDHRGRPACPLLSMFKAVLLGQWH"
BASE COUNT          231 a          236 c          201 g          220 t
ORIGIN      
        1 cataccccgt tcttcgctaa ctaccgtccg caattctact tccgtaccac cgacgtaact
       61 ggcgcggtta ctttggaaga aggtgtagaa atggtaatgc cgggtgaaaa cgtaaccatc
      121 accgtagaac tgattgcgcc tatcgctatg gaagaaggtt tgcgctttgc gattcgcgaa
      181 ggcggccgta ccgtgggtgc cggcgtggtt tcttctgtta tcgcttaatt gaaggatatt
      241 gataaatggc aaaccaaaaa atccgtatcc gcctgaaagc ttatgattac gccctgattg
      301 accgttctgc acaagaaatc gttgaaactg caaaacgtac cggtgcagtt gtaaaaggcc
      361 cgattccttt gccgaccaaa atcgagcgtt tcaacatttt gcgttctccg cacgtgaaca
      421 aaacttcccg tgagcaattg gaaatccgca cccacttgcg cctgatggac atcgtggatt
      481 ggaccgataa aactaccgat gcgctgatga agctggattt gccggccggt gttgatgtag
      541 aaatcaaagt ccaataattc ggactattga aaatccccaa gcaatcaatg cttggggatt
      601 ttttatgtta tgccgagacc tttgcaaaat tccccaaaat cctctaaatt cccaccaaga
      661 catttagggg atttctcatg agcaccttct tccagcaaac cgcccaagcc atgattgcca
      721 gacacatcga ccgtttcccg ctattgaagt tggaccaggt gattgattgg cagccgatcg
      781 agcagtacct gaaccgtcaa aaaacccgtt acctccgaga ccaccgcggt cgtcccgcct
      841 gtcccctgtt gtccatgttc aaagccgtcc tgctcggaca atggcaca
//
LOCUS       DAWITQ010000264          886 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.264, whole genome shotgun sequence.
ACCESSION   DAWITQ010000264 DAWITQ010000000
VERSION     DAWITQ010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 886)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 886)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.264"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            373..603
                     /locus_tag="WIX18_002132"
     CDS             373..603
                     /locus_tag="WIX18_002132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239172.1"
                     /translation="MNIVKKYAVKALLAAGIFTPAIVMADGFDAAAIGTQVANVIMGF
                     VAMVSAVGMAAITVILAIQGFKMAWSMIKSVK"
     gene            631..>886
                     /locus_tag="WIX18_002133"
     CDS             631..>886
                     /locus_tag="WIX18_002133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239173.1"
                     /translation="MGYRVGMNCFDTRLQADDYLLSSLPPTVTEEGKIIRPERVGDKW
                     ILNGKPVTLSYPECSNFEQIKQGSYVGSTVLILFVVIFGFR"
BASE COUNT          259 a          155 c          220 g          252 t
ORIGIN      
        1 ttcggtgatg tggggtttac tcaaaatatt aaatcagcag gtcaatttga aagctacgaa
       61 gatgcgttga attcaggcat aaatgaaatg ggcggaggat tccagatatt tcagttcttc
      121 gtaaaatcgg aataaaagaa aaacaggctc ggcgggcggt ctgttaacct ttcacaaagc
      181 ccgcaacaaa ggaaaaatat catgaaaatg aaccttgcaa cactaattat cggctgggtg
      241 gtctgtatgt ttctttttct tttcgcaatc ctctatttta tcggctaaaa acgagattcg
      301 gaaaagactt cgtccggatg aagcaagtca agaagtcgtc ttattttaaa tatcaaaaaa
      361 aggaaaaaaa cgatgaacat cgttaaaaaa tatgctgtaa aagcattgtt ggcagctggt
      421 atcttcacac cggctattgt tatggcagat ggctttgatg cagccgcgat tggtacgcaa
      481 gtggcgaatg taatcatggg tttcgttgcg atggtttccg ccgtgggtat ggcggccatt
      541 accgtcattt tggcaatcca aggcttcaaa atggcttgga gcatgattaa atctgtcaaa
      601 taacggcagt gaagaaagag gggcgcgtga atgggttatc gtgtcggcat gaactgtttt
      661 gatacaagat tgcaggcaga cgactattta ttgtcgtctc ttcctcctac tgttacagaa
      721 gaaggaaaaa tcatcaggcc ggaaagggtg ggcgataaat ggattttgaa cggaaagccg
      781 gttacgttgt cttatccgga atgttccaat tttgagcaga taaagcaagg ttcttatgtc
      841 ggttcgacgg ttctaattct gttcgtagtc attttcggtt tcaggc
//
LOCUS       DAWITQ010000265          886 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.265, whole genome shotgun sequence.
ACCESSION   DAWITQ010000265 DAWITQ010000000
VERSION     DAWITQ010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 886)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 886)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.265"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(10..576)
                     /locus_tag="WIX18_002134"
     CDS             complement(10..576)
                     /locus_tag="WIX18_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP family protein"
                     /protein_id="HEZ5239174.1"
                     /translation="MSLYALLLIALGMSMDAFAVALAKGAAVRMPPRKIAATALVFGS
                     VEALTPLAGWVGGFYAKPFISEWDHWAAFVLLGGLGLKMMREGLSGKAEDVRESKRES
                     LWMTVLTAFGTSIDSMIVGVGLAFMEVNIAFAAAIIGMATTVMVAVGLTAGRALGVLF
                     GRRAEFAGGLVLIAIGTWTLLSHLGLIQ"
BASE COUNT          236 a          282 c          188 g          180 t
ORIGIN      
        1 tttccgacat cattgaatca aacccaaatg cgacaagagc gtccatgtac cgatggcaat
       61 caacaccaaa cctccggcaa attccgcacg cctgccgaac aatacgccca aagcccttcc
      121 cgccgtcagc ccgaccgcca ccatcaccgt cgtcgccata ccgatgattg cggcggcaaa
      181 ggcgatgttt acctccataa acgccaagcc caccccgact atcatggaat caatactggt
      241 tccaaaagca gtcaaaaccg tcatccatag gctttcccgt ttgctttcgc gcacatcttc
      301 cgccttgccg gacagccctt cgcgcatcat tttcagaccc agcccgccca gcaggacgaa
      361 agccgcccaa tggtcccatt cgctgataaa cggtttggca taaaaaccgc ctacccagcc
      421 tgccagcggc gtgagtgctt caaccgagcc gaacaccaag gctgttgctg caattttgcg
      481 cggaggcatc ctgaccgccg caccctttgc caatgcgacg gcaaacgcat ccatcgacat
      541 ccccagcgca atcaagagca aagcgtaaag actcataccg cacccatcct caaaaagggc
      601 agattatagc aaaacagcaa agcgcgaaaa acgccgcacg aaaacccaca tcccgtcatt
      661 cccgcgcagg cgggaatcca gagttgtcgg tgcggaaact tatcgggaaa aacggtttct
      721 ttagatttta tagtggatta acaaaaacca gtacagcgtt gcctcgcctt ggctcaaaga
      781 gaacgattct ctaaggtgct gaagcaccga gtgaatcggt tccgtactat ctgtactgtc
      841 ttcggcttcg tcgccttgtc ctgatttttg ttaatccatt atatga
//
LOCUS       DAWITQ010000266          864 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.266, whole genome shotgun sequence.
ACCESSION   DAWITQ010000266 DAWITQ010000000
VERSION     DAWITQ010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 864)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 864)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.266"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..775)
                     /gene="mafB"
                     /locus_tag="WIX18_002135"
     CDS             complement(<1..775)
                     /gene="mafB"
                     /locus_tag="WIX18_002135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
                     /protein_id="HEZ5239175.1"
                     /translation="MKLPIQKFMMLFAAAISLLQIPISHANGLDARLRDDMQAKHYEP
                     GGKYHLFGNARGSVKNRVYAVQTFDATAVGPILPITHERTGFEGIIGYETHFSGHGHE
                     VHSPFDNHDSKSTSDFSGGVDGGFTVYQLHRTGSEIHPEDGYDGPQGSDYPPPGGARD
                     IYSYYVKGTSTKTKTNIVPQAPFSDRWLKENAGAASGFFSRADEAGKLIWESDPNKNW
                     WANRMDDIRGIVQGAVNPFLMGFQGLGVGAITDSAVNPVT"
BASE COUNT          210 a          215 c          189 g          250 t
ORIGIN      
        1 aggttaccgg gtttaccgca ctgtctgtaa ttgccccaac tcccaatccc tgaaaaccca
       61 ttaaaaaagg attaaccgca ccttggacga tgccgcgaat atcatccata cggttagccc
      121 accaattttt attggggtcg ctttcccata tcagttttcc tgcttcatcc gcacggctga
      181 aaaaaccaga ggcggcaccg gcattttctt ttagccaacg gtctgaaaat ggggcttgag
      241 ggacaatatt agtctttgtt tttgttgaag ttcctttgac ataatagctg tatatatccc
      301 ttgctcctcc ggggggcgga taatcgctgc cttgcggccc gtcatatcca tcctccggat
      361 gaatttccga ccctgtccga tgaagttggt aaacagtaaa accaccgtct acaccgccgc
      421 tgaaatcaga agtgcttttt gaatcatgat tatcgaacgg actgtgtact tcatgtccat
      481 gtcctgaaaa atgggtttca taaccgataa tgccttcaaa ccctgtccgt tcgtgtgtaa
      541 taggcagtat ggggccgacc gcagttgcat caaatgtctg gacggcgtaa acccgatttt
      601 taacactgcc gcgagcatta ccaaacagat ggtatttacc acccggttcg tagtgttttg
      661 cctgcatatc atcgcgtaaa cgggcatcca aaccgttcgc atgactaatg gggatttgca
      721 gcaacgatat tgccgctgca aacagcatca tgaatttttg aataggcaat ttcattttgt
      781 tttccttggt agcaagcggt tatggtcgtg tgaatcaagg ttgcccttgt ctatgttgtc
      841 gcactacttc atcgctgtat ccat
//
LOCUS       DAWITQ010000267          824 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.267, whole genome shotgun sequence.
ACCESSION   DAWITQ010000267 DAWITQ010000000
VERSION     DAWITQ010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 824)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 824)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..824
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.267"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            370..615
                     /locus_tag="WIX18_002136"
     CDS             370..615
                     /locus_tag="WIX18_002136"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239176.1"
                     /translation="MVLELSTYCVSPSAGSVVDFDLKKRGGVGQDVFRGTPDCGGVCL
                     YFAEGFKNRVVGYIGCTVLVCARSGQGAMGKFARDAV"
     gene            complement(635..>824)
                     /locus_tag="WIX18_002137"
     CDS             complement(635..>824)
                     /locus_tag="WIX18_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239177.1"
                     /translation="TIMRPFDGVKYKDTLTAGFSSPHHHLTADSYLQKRREPDRWYSR
                     IRRAVREAATSRAPSHDE"
BASE COUNT          148 a          159 c          294 g          223 t
ORIGIN      
        1 gcggccggtg cttttttgtt tggaagggaa acggcaggaa aaagacccgc gccatatcgg
       61 ggaatgaacc gacgcaaagg aaatgcggtt tgaatatgcg tccgggcggt gttttactgt
      121 gtgtgccgta tggcggggca gggtgtctga tttcgtgatg accgtgttgg tggaatcgaa
      181 gcctgccgtt ccggtaaggg ttgcccggga gggcaaggcc ggctttgtat gcccggttaa
      241 gagggaagga tgagactgtg catttttgat tttaattggc tatatgccgt ctgaaaatcg
      301 gtttgaaggc ggtactttta tgctgccttt catacagggg aatgggaacg ttgcggctgc
      361 gcggaaaccg tggtgcttga actttctact tactgcgttt cgccgtcggc gggttcggtg
      421 gtggattttg acctgaaaaa aagggggggt gttgggcaag atgtttttag gggaacgccg
      481 gattgcggtg gggtttgcct ttattttgca gaaggcttta aaaaccgtgt ggtcgggtac
      541 atcggctgta ccgtgcttgt ttgtgcaaga tcggggcagg gtgcgatggg caagtttgcc
      601 cgggatgccg tctgaagcgt tcagacggca ttttttattc gtcgtggctt ggtgcgcggg
      661 atgtggcggc ttcccggacg gcacggcgga tgcggctgta ccatcggtcg ggttctcgcc
      721 gcttttggag gtaactgtcg gcggtcaggt ggtggtgcgg gcttgaaaaa ccggcggtta
      781 gggtgtcttt atatttcacc ccgtcaaaag ggcgcattat agtg
//
LOCUS       DAWITQ010000268          798 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.268, whole genome shotgun sequence.
ACCESSION   DAWITQ010000268 DAWITQ010000000
VERSION     DAWITQ010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 798)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 798)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.268"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            337..636
                     /locus_tag="WIX18_002138"
     CDS             337..636
                     /locus_tag="WIX18_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HEZ5239178.1"
                     /translation="MQRCFNWFDHYCRRLEKYFRRCSIMETWVQNYTAIGGSLYLTAA
                     AALLPIVFFFAALTVLKLKGYQAGLYTLLIALAVAVFGFGMPAGMAVSSLPPQPH"
     gene            630..798
                     /locus_tag="WIX18_002139"
                     /pseudo
     CDS             630..798
                     /locus_tag="WIX18_002139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777280.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
BASE COUNT          216 a          219 c          172 g          191 t
ORIGIN      
        1 atcaaacatc aaattggact gaccaatcag ggcggattct aatgacacgc cgttcccgcc
       61 gtcaacggca tttacctcgc accgcccccg aaacacaaga aaaaactaca ccaaactaca
      121 atttttgttt atacaaatat ttgttttgac aggatttaaa cgaaagctcc gattcaaatc
      181 tgccgaaccg cccaaaaata tatagtggat taacaaaaat caggacaagg cgacgaagcc
      241 gcagacagta cagatagtac ggtaaggcga ggcaacgccg tactggttta aatttaatcc
      301 attctattga cctgaatatt aaagtttcgc aaagtaatgc aacgttgctt taattggttt
      361 gaccactatt gccgacgatt agaaaaatat tttcggagat gttcaattat ggaaacttgg
      421 gttcaaaact acacggcaat cggcggcagc ctgtatctga ctgccgccgc cgcactctta
      481 cccatcgtct ttttctttgc cgcgctgacc gtcctgaagc tgaaaggcta tcaggcgggg
      541 ctttatacgc tgctgattgc gcttgccgtt gccgtattcg gcttcgggat gccggcgggt
      601 atggcggttt cttccctgcc gccgcagccg cactgaccca acgcccctac gccacgctgg
      661 atttgaccgc gcattacaaa atcggcaaat ccacccgcat tggtttggac tttgaaaacg
      721 tgttcaacaa acgctaccgc cctatgcccg acattcacgt ttacggcacg ccgcgcagcc
      781 tgaccgcaac cgtcaaac
//
LOCUS       DAWITQ010000269          794 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.269, whole genome shotgun sequence.
ACCESSION   DAWITQ010000269 DAWITQ010000000
VERSION     DAWITQ010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 794)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 794)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..794
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.269"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..402)
                     /locus_tag="WIX18_002140"
     CDS             complement(<1..402)
                     /locus_tag="WIX18_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T cell/B cell stimulating protein TspB"
                     /protein_id="HEZ5239179.1"
                     /translation="MFLILGRNFLKIILCFSFFVPKFALASVNVPGKFDRVEVYDDGR
                     YLGIRGSDDKRRRIWKGVFDRESGRYLTSEAQDLKVRHVSTGASSTGKVSSVVSSSVS
                     RAAVLSGVGKLARLGAKLSTRAVPYVGTALLA"
BASE COUNT          299 a          167 c          107 g          221 t
ORIGIN      
        1 ggctaaaagg gctgttccga cataaggaac tgcccttgtg cttaatttcg cgcctaagcg
       61 ggcaagtttg ccgactcctg acaagacggc ggcgcgggaa actgatgaag atacaaccga
      121 actaacttta cccgtacttg atgctccagt agatacatgc ctaactttta aatcttgagc
      181 ttctgaagtt aaatatcttc ccgattctct atcaaataca cctttccaaa ttcttcttct
      241 tttgtcatct gaacctcgaa tacctaaata tctgccatca tcataaactt caaccctatc
      301 aaatttaccc ggaacattta ctgatgccaa tgcaaattta ggtacaaaaa aactaaagca
      361 taggataatc tttaaaaaat ttcgccctag gataagaaac ataacatttt gcttcatcta
      421 atttaattaa taatgtagaa gaatcaggga attgaatttc tataaaatct ctatcataac
      481 gatgaaagaa attcctaaaa atatcaaatg aaaacgaagt tttaaaaacc ccttttctaa
      541 tcaattccct ataataaatt aacgcttgtg gtaaatctct ataaatatgt gaatcagttt
      601 gaaatttaac taaatgatat tcagaaataa acataattcg gaccttttaa aacactctaa
      661 aaagccgatt ctaccaaccg ttaccaaaac agccaagcaa cagacaaagc caagaagaaa
      721 ccgagaagaa accaaaaatc aataatcatc aatcagtacc aaccttgccc atgtctttta
      781 agaaattaat caga
//
LOCUS       DAWITQ010000270          793 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.270, whole genome shotgun sequence.
ACCESSION   DAWITQ010000270 DAWITQ010000000
VERSION     DAWITQ010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 793)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 793)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..793
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.270"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..285)
                     /locus_tag="WIX18_002141"
     CDS             complement(<1..285)
                     /locus_tag="WIX18_002141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T cell/B cell stimulating protein TspB"
                     /protein_id="HEZ5239180.1"
                     /translation="MYALSEKYNDNGFKAYKVLGEGGGIHTEYNYKFDKSLNLNVLES
                     STGARSLEKVPVKVTASVSRAAVLSGVGKLARLGAKLSTRAVPYVGTALLA"
BASE COUNT          283 a          154 c          116 g          240 t
ORIGIN      
        1 ggctaaaagg gctgttccga cataaggaac tgcccttgtg cttaatttcg cgcctaagcg
       61 ggcaagtttg ccgactcctg acaagacggc ggcgcgggaa actgatgcag ttactttaac
      121 ggggactttt tcaagagagc gtgcgcctgt tgaactttct aatacattca aattcaaact
      181 tttatcaaat ttgtaattat attctgtatg aattcctcct ccctcaccta aaactttgta
      241 tgccttaaat ccattatcgt tatatttttc cgaaagtgca tacatcaatt tcccattttt
      301 aatttctaaa tctgctgaaa aagatttagc actcaaaaga aacagaaaag aaattattag
      361 aatccgaaac atcaattttt ccattgccaa taatgaaaaa tgaatcatcc ttgaatttaa
      421 tttcaaagca agattcatta aaattaattc tattaaaaaa attatgacat ttatccattg
      481 agaaattttt caatagacca gtttctttca aataacaata aaacacataa gaaagaggcc
      541 tatcaggata agattctgac aatttatcta aatcagaatt tgatatatag aaaaagtcac
      601 gttcattttt attcatggtt tcaagcctca aatgtctaat taaaagcctg attttgacac
      661 cataacttca tgcgctcaat tcttaaacag aaccgccccg attaatacgg gtacggaaac
      721 gccgagataa aaataaaaat ccatcatttc aaaacctttt tcagcaggga aacaaagtaa
      781 acggacgcca tca
//
LOCUS       DAWITQ010000271          788 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.271, whole genome shotgun sequence.
ACCESSION   DAWITQ010000271 DAWITQ010000000
VERSION     DAWITQ010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 788)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 788)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..788
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.271"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..>788
                     /locus_tag="WIX18_002142"
     CDS             <1..>788
                     /locus_tag="WIX18_002142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEZ5239181.1"
                     /translation="VALVVTESTGGLEIPAAKAIRRAGIAVIIANPRQTHQFAQSQPL
                     TKTDAKDAKMLAFFAQMMTQKEDWQTMPYQPPTEAEEVLEALVNRRNQSADMRTAEKN
                     RLHQVHETQVGSVKQLIAHFDRLIDELDKQIDDHTHTHFDGKAQVAEQIKGIGSITTA
                     TLMAMLPELGRLSHKRIASLAGIAPHPRESEETKFKSRCFGGRSAVRKALYMATVVAT
                     RFKPLIRDFYQRLPSEGKPYKVAVTAYMRKLLTISNARMRDYFA"
BASE COUNT          206 a          222 c          215 g          145 t
ORIGIN      
        1 ggtcgccctc gtcgtgacgg aaagtactgg cggtctcgaa atccccgccg ccaaagccat
       61 ccgccgagca ggcatagccg tgattatcgc caacccgcgt cagacgcatc agtttgccca
      121 atcgcagccg ctgaccaaaa ccgacgccaa agatgccaaa atgctcgcct tcttcgcaca
      181 gatgatgacg cagaaagaag attggcaaac catgccctac caaccgccca cagaagcgga
      241 agaagtgttg gaagccttgg ttaaccgccg caaccaatcg gcggatatgc ggactgccga
      301 gaaaaaccgt ctgcatcagg ttcacgaaac gcaagtcgga agcgtcaaac aactgattgc
      361 ccattttgac cggctgattg acgaattgga caaacaaatc gacgaccaca cccacacgca
      421 ttttgacggc aaagcccaag tggcggagca aatcaaaggc atcggttcga taacgacggc
      481 tacgctgatg gcgatgctgc ctgagttggg gcggctgtcg cacaaacgga tagcgagttt
      541 ggccggcatt gccccgcacc cgagggagag cgaggaaacc aaattcaaaa gccgctgctt
      601 cggcggaagg tctgcggtac gtaaggcgct gtatatggct accgtggtag cgacacgttt
      661 taaaccgctt attcgggatt tctaccaacg cctgccgtcc gagggtaagc cgtataaggt
      721 tgccgttacg gcatatatgc gcaaactgct gacgatatcg aatgcccgga tgcgtgatta
      781 ttttgccg
//
LOCUS       DAWITQ010000272          747 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.272, whole genome shotgun sequence.
ACCESSION   DAWITQ010000272 DAWITQ010000000
VERSION     DAWITQ010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 747)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 747)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.272"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..>747
                     /locus_tag="WIX18_002143"
     CDS             <1..>747
                     /locus_tag="WIX18_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239182.1"
                     /translation="GTPQIGKTHDGKYAAFLASGYATKTIDDQQNKTALYVYDLESSG
                     TLIKKIDVPGGKGGLSSPTLVDKDLDGTVDIAYAGDRGGKMYRFDLSGQDPQQWSVRT
                     IFSGNKPITSAPAVSQLKDKRVVIFGTGSDLSEEDVDNNDIQSIYGIFDNDTDTGTAQ
                     DGQGKGLLEQKLSEENKTLFLTDYKRSDGSGDKGWVVKLQPGQRVTVKPTVVLRTAFV
                     TIRKYNDGGCGAETAILGINTADGGKLTKK"
BASE COUNT          206 a          191 c          200 g          150 t
ORIGIN      
        1 tcggcacgcc gcaaatcggc aaaacccacg acggcaaata cgccgctttc ctcgcctccg
       61 gttatgcgac taaaaccatt gacgaccaac aaaataaaac cgcgctgtat gtgtatgatt
      121 tggaaagcag cggtacgctg attaaaaaaa tcgatgtacc cggcggcaag ggcgggcttt
      181 cgtcccccac gttggtggat aaagatttgg acggcacggt cgatatcgcc tatgccggcg
      241 atcgcggcgg gaaaatgtac cgctttgatt taagcggtca agatcctcaa caatggtctg
      301 tacgcaccat tttcagcggc aacaaaccga ttacttccgc gcccgccgtt tcccaactga
      361 aagacaaacg cgtggtcatc ttcggcacgg gcagtgattt gagtgaggaa gatgttgata
      421 ataatgatat acaatctatt tacggtattt ttgacaatga cacagacacg ggtacggcgc
      481 aagacgggca gggcaaaggg ctgctcgagc aaaagcttag tgaggaaaat aaaaccttat
      541 tcctgaccga ttataagcga tccgacggct cgggcgacaa gggctgggta gtgaaattgc
      601 agcccggaca gcgcgttacc gtcaaaccga ccgtggtatt gcgtaccgcc tttgtaacca
      661 tccgcaaata taacgacggc ggctgcggcg cggaaaccgc cattttgggc atcaataccg
      721 ccgacggcgg caagctgacg aagaaaa
//
LOCUS       DAWITQ010000273          726 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.273, whole genome shotgun sequence.
ACCESSION   DAWITQ010000273 DAWITQ010000000
VERSION     DAWITQ010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 726)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.273"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(129..>726)
                     /locus_tag="WIX18_002144"
     CDS             complement(129..>726)
                     /locus_tag="WIX18_002144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEZ5239183.1"
                     /translation="LSIGQIVKVKPAGYAAPKTAAVESRPAVPAAVQTPVKPAAQPPV
                     QSAPQPAAPAAENKAVPAPAPQSPAASPSGTRSVGGIVWQRPTQGKVVADFGGNNKGV
                     DIAGNAGQPVLAAADGKVVYAGSGLRGYGNLVIIQHNSSFLTAYGHNQKLLVGEGQQV
                     KRGQQVALMGNTDASRTQLHFEVRQNGKPVNPNSYIAF"
BASE COUNT          159 a          208 c          200 g          159 t
ORIGIN      
        1 ccaaacacag tcaaacaaat ttatatgccc cgtcccttct gaatgatttg aaaacacagc
       61 cgccaaaaac aaaaatgccg tctgaaaacc tttcagacgg catttccaat ttgatttcag
      121 gcagaaagtc agaacgcgat atagctgttc gggttaaccg gtttgccgtt ttgccgcacc
      181 tcgaaatgaa gctgcgttct ggaagcgtcg gtattgccca tcaaagcgac ctgctgcccg
      241 cgtttgacct gctggccttc gccgaccagc aatttttggt tgtgcccgta tgcggtcagg
      301 aaggaagaat tatgctggat gatgaccaga ttgccgtatc ccctcaaacc ggaacctgca
      361 taaaccactt tgccgtcagc cgccgccaaa acgggctgtc ccgcattacc ggcaatatcg
      421 acacccttgt tgttgccgcc gaaatcggca accactttac cttgcgtcgg acgctgccaa
      481 acaatgccgc cgaccgaacg cgtgccggaa ggcgaagcgg caggagattg cggggcgggc
      541 gcgggaaccg ctttattttc cgcagcgggc gcggcaggtt gcggcgcgga ctgcacaggc
      601 ggttgcgcgg cgggtttcac aggggtttgc acggcagccg gtacggcggg cctgctttct
      661 acggctgcgg ttttcggtgc ggcatatcct gccggtttga ctttaacaat ctgaccgatg
      721 ctcaac
//
LOCUS       DAWITQ010000274          726 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.274, whole genome shotgun sequence.
ACCESSION   DAWITQ010000274 DAWITQ010000000
VERSION     DAWITQ010000274.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 726)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.274"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            138..572
                     /locus_tag="WIX18_002145"
     CDS             138..572
                     /locus_tag="WIX18_002145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HEZ5239184.1"
                     /translation="MNFALSVITFTLASFLPVPPAGAAVFTWKDGGGNSYSDVPKQLH
                     PDQSQILNLRTRQTKPAVKPAQADAGKRTDGAAQENNPDTAEKNRQLEEEKKRIAETE
                     RQNKEENCRISKMNLKAVGNSNAKNKDDLIRKYNNAVNKYCR"
     gene            complement(621..>726)
                     /locus_tag="WIX18_002146"
     CDS             complement(621..>726)
                     /locus_tag="WIX18_002146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEZ5239185.1"
                     /translation="LRLPFGGVKDSGYGRELSEFGLYEFVNVKTYWQK"
BASE COUNT          221 a          212 c          164 g          129 t
ORIGIN      
        1 gggaatctgt ttcaccccaa tatataaagc accatattaa ggcggagttt cttccccact
       61 ttgacccgaa cccggaaaag acaccgccca agccaatcct gatgctgccc cgacagccaa
      121 cccttaagga aaccctaatg aactttgctt tatccgtcat cacatttacc ctcgcctctt
      181 tcctgcccgt cccgcctgcc ggagccgccg tctttacttg gaaggacggc ggcggcaaca
      241 gctattcgga tgtaccgaaa cagcttcatc ccgaccaaag ccaaatctta aacctgcgga
      301 cgcgccaaac caaaccggcg gtcaaacccg cccaagccga cgcagggaag cgcacagacg
      361 gcgcggcaca ggaaaacaat cccgacactg ccgagaaaaa ccggcagctt gaggaagaaa
      421 agaaaagaat tgccgaaacc gaacggcaga acaaagaaga aaactgccgg atttcaaaaa
      481 tgaacctgaa ggcggtggga aattcaaatg caaaaaacaa ggatgatttg attcggaaat
      541 acaataacgc cgtaaacaaa tactgccgtt gagcagcctc atcgaaaacc ccatgccgtc
      601 tgaagcggca cggggtttgt ttatttctgc cagtaggttt tgacgttgac gaactcgtac
      661 agcccgaatt cggacaattc gcgcccgtaa ccggaatctt taacccctcc gaaaggcagg
      721 cgcaaa
//
LOCUS       DAWITQ010000275          705 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.275, whole genome shotgun sequence.
ACCESSION   DAWITQ010000275 DAWITQ010000000
VERSION     DAWITQ010000275.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 705)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 705)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.275"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            545..>705
                     /gene="pilE"
                     /locus_tag="WIX18_002147"
     CDS             545..>705
                     /gene="pilE"
                     /locus_tag="WIX18_002147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial major subunit PilE"
                     /protein_id="HEZ5239186.1"
                     /translation="MNTLQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAI
                     LLAEGQKSAV"
BASE COUNT          242 a          195 c          109 g          159 t
ORIGIN      
        1 ccgacagacc tagattcccg cctgcgcggg aatgacgaag ctatccgcac ggaaacctgc
       61 cgcgatgatt caactgccgt ttgcacagga acaccacgcg ccgatttcaa tcactttcca
      121 agaaaacgga aatttttaaa aattaaattt aaaatttccc acccacaccc accctatgct
      181 accgcgcaaa ttcaaaaatc tcaaattccg acccaatcaa cacacccgat gccccatgcc
      241 aatagaaata ccccacgcca ataaaaaagt gccgaaaatc ggcactaaaa ctgacaattt
      301 tcaacactac taacaaaaaa cggtaacccc ctgcttcctc aaaccacgcc caaacgaaag
      361 aaaatgtaaa ataaaaacaa ccatataaag ataaacgcat aaattttcac ctcaaaacac
      421 aaacttgata ccaatcttgc tttataatac acaggtatcg caacaaaata ccgatggtca
      481 aatacattgc ataatgccga tggcgtaagc ttgaggcatt tcctttccaa ttaggagtaa
      541 ttttatgaac acccttcaaa aaggttttac ccttatcgag ctgatgattg tgattgccat
      601 cgtcggcatt ttggcggcag tcgcccttcc tgcttatcaa gactacacag cccgcgcaca
      661 agtttccgaa gccattcttt tggctgaagg tcaaaaatca gccgt
//
LOCUS       DAWITQ010000276          688 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.276, whole genome shotgun sequence.
ACCESSION   DAWITQ010000276 DAWITQ010000000
VERSION     DAWITQ010000276.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 688)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 688)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.276"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..174
                     /locus_tag="WIX18_002148"
     CDS             <1..174
                     /locus_tag="WIX18_002148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ5239187.1"
                     /translation="NHINGIENFWNQAKRVLRKYNEIDRKSFPLFLKECKFRFNFGTP
                     SRQLKILRDWCGI"
BASE COUNT          165 a          156 c          179 g          188 t
ORIGIN      
        1 aaccacatta acggcattga gaacttttgg aatcaggcaa aacgcgtctt gcgcaaatac
       61 aacgaaattg atcgtaaatc tttcccgctg ttcttgaaag aatgcaaatt tcggtttaac
      121 ttcggcacac cgtcccgaca gctaaaaatt ttgcgggatt ggtgtggaat ttagggctaa
      181 tctagtacag ccccttagat ttaattcact atacctgcgt aatggtatcg ggtactcatc
      241 atcaacctgc cttgcattcg gttgtgttgt ccggcaactg tccggttgtg tcgatgggtt
      301 gccctgccgc tccctgtgct acgcaacggt tgtgtgcctt gggtgggcgc gggtggcggc
      361 cgggcggttt gttgctatga tacgggagtt ccgatataca agggtgggct tcagcccacc
      421 aatcaacgac cgaaaaagaa aaaacgttgg gctgaagccc actctacgca attacgcaac
      481 tgttatcgtg gggatgacgg gattttaggt ttttgttttt ctgtttttgc gggaaggatg
      541 ggttttaggt tgcggtcatt tatcggaaaa gcagaaatcg ctccgccgtc attcccgcga
      601 aagcgggaat ctgaacacgt ccgtagggaa acctatatcc cgtcattccc acgaaagtgg
      661 gaatctagaa cctctgaatt ttcagaca
//
LOCUS       DAWITQ010000277          681 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.277, whole genome shotgun sequence.
ACCESSION   DAWITQ010000277 DAWITQ010000000
VERSION     DAWITQ010000277.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 681)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 681)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.277"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(80..565)
                     /gene="fxsA"
                     /locus_tag="WIX18_002149"
     CDS             complement(80..565)
                     /gene="fxsA"
                     /locus_tag="WIX18_002149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009349087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein FxsA"
                     /protein_id="HEZ5239188.1"
                     /translation="MRFFGIGFLVLLFLEIMSIVWVADWLGGGRTLFLMAATFAAGVL
                     MLRHTGLSGLLLAGAAMRSGGRVSVYQMLWPIRYTVAAVCLMSPGFVSSVLAVLLLLP
                     FKGGAVLQAGGAENFFNMNQSGRKEGFSRDDDIIEGEYTVEEPYGGNRSRNAIEHKKD
                     E"
BASE COUNT          198 a          215 c          124 g          144 t
ORIGIN      
        1 gtactggttt ttgttaatcc actatatttt caaaccggaa aaatgccgtc tgaaccttca
       61 gacggcattc cattcacatt tattcgtctt ttttgtgttc gatggcgttt cgggaacgat
      121 tgccgccgta aggctcttca accgtatatt ccccctcgat aatatcgtca tcgcgggaaa
      181 agccctcttt tctgcccgat tggttcatgt tgaaaaaatt ttccgcacct cctgcctgca
      241 acactgcacc tcccttaaac ggcagcagca gcaataccgc caacaccgag gatacgaatc
      301 ccggactcat cagacacacc gccgccaccg tataacggat aggccacaac atctgataaa
      361 cggataccct cccgccgctt ctcattgccg cacccgccaa taaaagaccg gacagccccg
      421 tatgcctgag catcagcaca ccggcggcaa aggttgccgc catcagaaac agcgtccgac
      481 cgccgcccag ccaatcggca acccacacaa tcgacataat ctccaaaaac agcagcacca
      541 aaaaaccgat accgaaaaat ctcattgacc gtcatcctta tatttaagta aacagcaaac
      601 cgcccgaaca agactccaag cgacctgcct gtaaatgatt acaaaaccat gtgcttcaag
      661 ccgaaacaat gtgaaatcac g
//
LOCUS       DAWITQ010000278          675 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.278, whole genome shotgun sequence.
ACCESSION   DAWITQ010000278 DAWITQ010000000
VERSION     DAWITQ010000278.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 675)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 675)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.278"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(89..640)
                     /locus_tag="WIX18_002150"
     CDS             complement(89..640)
                     /locus_tag="WIX18_002150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239189.1"
                     /translation="MKVLNGWSDRKMWRVLSALPIGVVFFDLIYGFVLNILQGLDLQR
                     AVPDSEGVLAVTPDIAFNSLQIVANGGMAAVVCFGLAVVFLLNRSVRRRQVLEIGVFQ
                     MLGLVAVLAFSAPSVWEWANALPLLLKGADVVNTGNARYVLTALCMPFPAVSCVIGLV
                     GRFRLQTASGRAAKSGGAGKADG"
BASE COUNT          187 a          266 c          127 g           95 t
ORIGIN      
        1 aagaaaccgc cattagcact acaccccccc aagctgcggc tgccaaacac atcggctgct
       61 tctcgacgca cccgctgaaa aatgcgtcct atccgtccgc cttgcccgca ccccctgact
      121 ttgccgccct gcccgatgcc gtctgaagcc tgaaccgccc caccagcccg atgacgcacg
      181 acaccgccgg aaagggcata cacaaagccg tcagcacata acgcgcattc cccgtattga
      241 ccacgtccgc gcccttcagc agcagcggta gcgcgttcgc ccactcccac accgacggcg
      301 cgctgaacgc caataccgcc accagcccca acatctggaa caccccgatt tccaacacct
      361 gccgccgccg caccgaacgg ttgagcaaaa acacaaccgc caacccgaaa cagaccaccg
      421 ccgccatacc gccgttggcg acaatctgca aactgttgaa tgcaatatcg ggcgtaaccg
      481 ccaacacgcc ttccgaatcc ggcacggcac gctgcaaatc caaaccctgc aagatattca
      541 acacaaaacc gtagatcaaa tcaaaaaaca ccacgcctat cggcaaagca ctcaaaaccc
      601 gccacatctt cctgtccgac caaccgttca aaactttcat tttacccgac cacgcaagcc
      661 gccgaacaaa aaata
//
LOCUS       DAWITQ010000279          663 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.279, whole genome shotgun sequence.
ACCESSION   DAWITQ010000279 DAWITQ010000000
VERSION     DAWITQ010000279.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 663)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 663)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.279"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..256
                     /locus_tag="WIX18_002151"
     CDS             <1..256
                     /locus_tag="WIX18_002151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HEZ5239190.1"
                     /translation="RDATGAKADDVTADSDKQIDTKHLPSTCRDASSANRTKTPGFAF
                     KYFQKISRYRVLPESRQMTKKLRHSRAGGNLGLSVRKLIG"
     gene            303..662
                     /locus_tag="WIX18_002152"
     CDS             303..662
                     /locus_tag="WIX18_002152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HEZ5239191.1"
                     /translation="MTGFNDAAGVASASDIKGKYVEKVEVAKGVVTAEMKSTGVNNEI
                     KGRKLSLWAKRQDGSVKWFCGQPVTRDANNTADDAVKADTGTNGKIDTKHLPSTCRDA
                     SSVVCIETPPTAFYKNT"
BASE COUNT          188 a          198 c          156 g          121 t
ORIGIN      
        1 gcgcgacgcc accggcgcca aagccgacga cgtcaccgcc gacagcgaca agcagatcga
       61 caccaagcac ctgccgtcaa cctgccgcga cgcttcatct gccaaccgta caaaaacacc
      121 cggtttcgct ttcaaatact tccaaaaaat cagccgttac cgagtattgc ccgaatcacg
      181 gcaaatgacc aaaaaacttc gtcattcccg cgcaggcggg aatctaggtt tgtcggtgcg
      241 gaaacttatc gggtaaaaag gtttcttgag attttgcgtt ctggattccc actttcgtgg
      301 gaatgacggg atttaatgat gccgccggcg tggcatccgc ctccgacatc aaaggcaaat
      361 atgttgagaa agttgaagtc gcaaaaggcg tcgttaccgc cgaaatgaaa tcaaccggcg
      421 taaacaacga aatcaaaggc agaaaactct ccctgtgggc caagcgtcaa gacggttcgg
      481 taaaatggtt ctgcggacag ccggttacgc gcgacgccaa caacaccgcc gacgacgccg
      541 tcaaagccga caccggcacc aacggcaaga tcgacaccaa gcacctgccg tcaacctgcc
      601 gcgacgcttc atctgtcgtt tgcatagaaa caccacctac ggctttctat aaaaatacct
      661 aaa
//
LOCUS       DAWITQ010000280          647 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.280, whole genome shotgun sequence.
ACCESSION   DAWITQ010000280 DAWITQ010000000
VERSION     DAWITQ010000280.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 647)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.280"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..375
                     /locus_tag="WIX18_002153"
     CDS             <1..375
                     /locus_tag="WIX18_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239192.1"
                     /translation="LMPRGMKANSLVVGYDADGLPQKVYWSFDNGKKRQSFEYYLKNG
                     NLFIAQSSTVALKADGVTADIQTYHAQQTWYLDGGRIIREEKQGDKLPDFPLNLENLE
                     KEVSRYAEAAARRSGGRRDLSH"
     gene            complement(462..>647)
                     /locus_tag="WIX18_002154"
     CDS             complement(462..>647)
                     /locus_tag="WIX18_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239193.1"
                     /translation="YLANLGDRYADNAAAIVGKDANLNGLNLWMKKGVENLWDDTVGK
                     KIRLMCISVFWIVVFNL"
BASE COUNT          192 a          143 c          153 g          159 t
ORIGIN      
        1 ttgatgcccc gggggatgaa ggcgaacagt cttgtggtcg gctatgatgc ggacggtctg
       61 ccgcaaaaag tctattggag tttcgacaat ggaaaaaaac gccagagttt cgaatattat
      121 ttgaaaaacg gaaatctttt tattgcacaa tcttcgacgg tagcattgaa agcggatggc
      181 gtaacggcgg atatacagac ctatcatgcg caacagacgt ggtatttgga tggcgggcgg
      241 attatccgcg aagagaaaca gggagacaaa ctgcctgatt ttcctttgaa cttggaaaat
      301 ttggaaaaag aggtgagccg ttatgcagag gctgcggcga gacgttcggg cggcaggcgc
      361 gacctttctc actgaacgca aatgccgtct gaaaccggtt ttcagacggc attggagagt
      421 caaacgcttt ttgcaatgcc gtatatgccg aatccgattc gctacaaatt gaaaaccaca
      481 atccaaaaaa cggaaataca cattaaacgg atctttttac cgaccgtatc atcccatagg
      541 ttttccacac cttttttcat ccataaattc aaaccattta agtttgcatc cttaccgaca
      601 attgcggcag cattatccgc ataacggtca cccaaattag ccaaata
//
LOCUS       DAWITQ010000281          603 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.281, whole genome shotgun sequence.
ACCESSION   DAWITQ010000281 DAWITQ010000000
VERSION     DAWITQ010000281.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 603)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 603)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.281"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            complement(<1..342)
                     /locus_tag="WIX18_002155"
     CDS             complement(<1..342)
                     /locus_tag="WIX18_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239194.1"
                     /translation="MHTQRKNFSDSISLHDCYCTEIKVEGRNVCFNFEDGFVVPDNNP
                     NNQAGKHLKTDFSRVVLTHKNENAEDDYLFDIFEDIVFLGKRLFTVRKFLDFSELLEM
                     VNTQGYFLEFLY"
     gene            440..>603
                     /locus_tag="WIX18_002156"
     CDS             440..>603
                     /locus_tag="WIX18_002156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HEZ5239195.1"
                     /translation="MSTFFRQTAQAMIAKHINRFPLLKLDQVIDWQPIEQYLNRQRTR
                     YLRDHRGRPA"
BASE COUNT          196 a          147 c           97 g          163 t
ORIGIN      
        1 atacagaaac tcaagaaaat aaccttgtgt attgaccatc tcaagcaatt cagaaaaatc
       61 aagaaatttt ctgaccgtaa acaaacgttt ccctaaaaaa acgatgtctt caaaaatatc
      121 gaacaaataa tcatcttcgg cgttttcatt tttatgggtt aaaacaacac gggaaaaatc
      181 tgttttcaga tgcttgcccg cttgattgtt cggattattg tccggaacga caaaaccgtc
      241 ctcaaaatta aagcagacgt tgcgtccttc tacctttatc tctgtgcaat aacaatcatg
      301 tagagaaatg ctatccgaaa aattttttct ttgtgtatgc aaaaaaagtt ttcattcaag
      361 tacccatatc taacacgaga cctttgcaaa attccccaaa atcccctaaa ttcccaccaa
      421 gacatttagg ggattttcca tgagcacctt cttccggcaa accgcccaag ccatgattgc
      481 taaacacatc aaccgcttcc cgctattgaa gttggaccag gtgattgatt ggcagccgat
      541 cgaacagtat ctgaatcgtc aaagaacccg ttaccttaga gaccaccgcg gccgtcccgc
      601 cta
//
LOCUS       DAWITQ010000282          593 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.282, whole genome shotgun sequence.
ACCESSION   DAWITQ010000282 DAWITQ010000000
VERSION     DAWITQ010000282.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 593)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.282"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..>593
                     /locus_tag="WIX18_002157"
     CDS             <1..>593
                     /locus_tag="WIX18_002157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin"
                     /protein_id="HEZ5239196.1"
                     /translation="AAIGYATGGSGGAVVGANVDWNNRQLHPSEYKLAEQYADIVASR
                     LNISKEEALGRIIRHMQRTVDYATAKADNFRTDDAIISILGANNLPKQDQHYTNPNYN
                     KQYIQNYVRDFNLANKYNYFGKTPTQSRDYKVGVVTDIGKAALNSGIGIFESAANLAT
                     GEIDPNSWAYVHMGRIGYTHPEYGNAWIRISSATLVY"
BASE COUNT          195 a          100 c          135 g          163 t
ORIGIN      
        1 gcggcaatcg gctatgcaac tggtggtagt ggtggtgctg tggtgggtgc gaatgtagat
       61 tggaacaata ggcagctgca tccgagtgaa tataaattag cagaacaata tgcagatata
      121 gtggcttctc gtctaaacat ttcaaaagaa gaagcacttg ggcgaattat tcggcatatg
      181 caacgaaccg tagattacgc aacggctaaa gcggataatt tccgtactga tgacgccatt
      241 atttcaattt taggagcaaa caatttaccc aagcaagatc aacattacac taatccgaac
      301 tacaacaaac aatacattca aaattatgtt cgtgatttca atttagccaa taaatacaat
      361 tattttggga aaactcctac tcaatcaagg gattataaag ttggagttgt tacagatatt
      421 ggtaaggctg cattaaatag cggtataggt atatttgaat cggctgcgaa tttagcgaca
      481 ggggagatag atccgaactc atgggcttat gtacacatgg ggcgtatagg ttatacacat
      541 cctgaatatg gaaatgcttg gattcggatt tcaagtgcaa cactagtgta tta
//
LOCUS       DAWITQ010000283          585 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.283, whole genome shotgun sequence.
ACCESSION   DAWITQ010000283 DAWITQ010000000
VERSION     DAWITQ010000283.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 585)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 585)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.283"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            170..>585
                     /locus_tag="WIX18_002158"
     CDS             170..>585
                     /locus_tag="WIX18_002158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ5239197.1"
                     /translation="MKTDIQTELTQALLPHEKVWANEEKTILAKNILLDLVEKTDPTI
                     IGLLLNNDELKRHFFVEVNGVLVFKLQDLRFFLDKHSVNNSYTKYANRIGLTDGNRFL
                     KDNSDIVLDFPFKDCVLNGGQSTEEGEEIYFKRSNS"
BASE COUNT          197 a          117 c          117 g          154 t
ORIGIN      
        1 tccgcaaaat cacgacacac tcggacaccc gccccgctta tcgcaacttt gcgaacgccc
       61 cggaaacagc aaatacagca aataattgat tttattagag tttatttgca aaaccatttg
      121 ccgttacaca agaatggcac attaaaatga ctgatgagga tttataacga tgaagacaga
      181 cattcaaacc gaattaaccc aagccctact accacacgaa aaagtatggg cgaacgaaga
      241 aaaaaccatt ttagccaaaa acattctgtt ggatttggtg gaaaaaaccg acccgaccat
      301 tatcggtttg ttattgaata atgatgagtt aaaacgccat ttctttgtgg aagtgaatgg
      361 tgttttggtg tttaaattgc aggatttacg ttttttcttg gacaaacaca gcgtcaataa
      421 ttcctacaca aaatacgcca accgcattgg tttgacggac ggcaaccgct ttttgaaaga
      481 caattcggat attgtgttgg attttccgtt taaagattgc gtattgaatg gcggacaaag
      541 caccgaagaa ggcgaagaga tttattttaa acgcagtaat agcca
//
LOCUS       DAWITQ010000284          542 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.284, whole genome shotgun sequence.
ACCESSION   DAWITQ010000284 DAWITQ010000000
VERSION     DAWITQ010000284.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 542)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 542)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.284"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            <1..>542
                     /gene="tuf"
                     /locus_tag="WIX18_002159"
     CDS             <1..>542
                     /gene="tuf"
                     /locus_tag="WIX18_002159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="EF-Tu; promotes GTP-dependent binding of
                     aminoacyl-tRNA to the A-site of ribosomes during protein
                     biosynthesis; when the tRNA anticodon matches the mRNA
                     codon, GTP hydrolysis results; the inactive EF-Tu-GDP
                     leaves the ribosome and release of GDP is promoted by
                     elongation factor Ts; many prokaryotes have two copies of
                     the gene encoding EF-Tu; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEZ5239198.1"
                     /translation="IVFMNKCDMVDDAELLELVEMEIRDLLSSYDFPGDDCPIVQGSA
                     LKALEGDAAYEEKIFELAAALDSYIPTPERAVDKPFLLPIEDVFSISGRGTVVTGRVE
                     RGIIHVGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQ
                     VLAKPGTITPHTKFKAEVYVL"
BASE COUNT          144 a          135 c          144 g          119 t
ORIGIN      
        1 atcgtgttca tgaacaaatg cgacatggtc gacgatgccg agctgttgga actggttgaa
       61 atggaaatcc gcgacctgct gtccagctac gacttccccg gcgacgactg cccgattgta
      121 caaggttctg cactgaaagc cttggaaggc gatgccgctt atgaagagaa aatcttcgaa
      181 ctggctgccg cattggacag ctacatcccg actcccgagc gtgccgtgga caaaccgttc
      241 ctgctgccta tcgaagacgt attctctatt tccggtcgtg gtacagtagt aaccggtcgt
      301 gtagagcgcg gtatcatcca cgttggtgac gagatcgaaa tcgtaggtct gaaagaaact
      361 caaaaaacca cttgtaccgg tgttgaaatg ttccgcaaac tgctggacga aggtcaagca
      421 ggcgacaacg taggcgtatt gctgcgcggt accaaacgtg aagacgtaga gcgtggtcaa
      481 gtattggcta aaccgggtac aatcactcct cacaccaagt tcaaagcaga agtatacgta
      541 ct
//
LOCUS       DAWITQ010000285          522 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.285, whole genome shotgun sequence.
ACCESSION   DAWITQ010000285 DAWITQ010000000
VERSION     DAWITQ010000285.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 522)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 522)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.285"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
     gene            89..>522
                     /locus_tag="WIX18_002160"
     CDS             89..>522
                     /locus_tag="WIX18_002160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor"
                     /protein_id="HEZ5239199.1"
                     /translation="MTDGKGNLLGVPLRRGVSDSAFIDQISFSFHEKTFFDKYGVRVS
                     LLEDEDFIHAASMLAEEVFGFGLYKESKGSGGRFYERCWLMGSEDVLYGRVHFGGQNN
                     TILFELTGTGCGVAKEGWESRLFAFLTNAIRPKITRVDIAKD"
BASE COUNT          136 a          122 c          128 g          136 t
ORIGIN      
        1 caaaccttcc ccccttatct aacggggggg tacagaaacc gaaacggcag gcagggttca
       61 ggaagtcttc gaatgttacg aaacgtacat aacggacggt aaaggaaacc tgttaggcgt
      121 tcctcttcgg cgcggtgtat cagattcggc tttcattgat caaattagct tttcatttca
      181 tgaaaaaacc tttttcgata aatacggtgt tagagtcagt ctgttagaag atgaagattt
      241 cattcacgcc gcgtccatgc tcgccgaaga agttttcggt ttcggtctct acaaagagtc
      301 caaaggctcg ggcggtcgtt tttatgagcg ctgttggttg atgggttcgg aagacgtcct
      361 atacggtcgc gtccattttg gcggacaaaa caataccatt cttttcgaac tgaccggcac
      421 cggttgcggc gtcgcaaaag aaggctggga atcacgactt ttcgcattcc tgactaatgc
      481 aatccgccca aaaatcacac gcgttgacat cgcaaaagac tt
//
LOCUS       DAWITQ010000286          522 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M36911
            SAMN14500651-rid9852203.denovo.286, whole genome shotgun sequence.
ACCESSION   DAWITQ010000286 DAWITQ010000000
VERSION     DAWITQ010000286.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14500651
            Sequence Read Archive: SRR11455003
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 522)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 522)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 18-MAY-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000739120.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000739120.1
            Genome Coverage       :: 251x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/18/2022 22:17:49
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 2,023
            CDSs (with protein)               :: 2,023
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 40 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 10 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14500651-rid9852203.denovo.286"
                     /isolate="M36911"
                     /isolation_source="nasopharyngeal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2015"
                     /collected_by="US State Health Department"
BASE COUNT          138 a          139 c          118 g          127 t
ORIGIN      
        1 cgacaaaatc gacaccaagc acctgccgtc aacctgccgc gacgcttcat ctgccagcta
       61 aggcaaatta taccataaat tttaaataaa tcaagcggta agtgattttc cacggccact
      121 cggattaatc cgggtggctt cctttttaag ggtttgcaag gcaagcgggg gcgtccgttt
      181 tggctgaaaa taatatatcg attgcgcttc aaggctctgc gcgtacctca ttgccgcccg
      241 tttaaacacg tggtttatct gacaggcgcg caatccgccc tctcatttac cgaacaagcg
      301 gactggattc ccgcctactc gggaatgacg aatccatccg cacggaaacc tgcaccgcgt
      361 cattcccacg aaagtgggaa tccagtttct tgagtttcag tcattcccaa taaattgcct
      421 tagcattgaa tgtctagatt cccgcctgcg cgggaatgac ggcaaccggc cggttgcgta
      481 tcaaaaaata aagtaattcg gctagatata gcggattaac aa
//
